FastQCFastQC Report
Wed 7 Sep 2022
HB10.1.R2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHB10.1.R2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24010355
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATGGCTTACTCTATGCTCTCCTCCGCCGCTGTTGTTACCTCCCCGGC388010.1616011091880982No Hit
GAAGAAGTAGTCATGGCTTACTCTATGCTCTCCTCCGCCGCTGTTGTTAC333730.13899419646231803No Hit
GTTTTATTTCGCTCAGCACTCAACCGCAATGGCCGCCTCAACAATGGCTC297120.12374660849454329No Hit
GTAGTCATGGCTTACTCTATGCTCTCCTCCGCCGCTGTTGTTACCTCCCC289170.12043553708389568No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)