FastQCFastQC Report
Fri 14 Oct 2022
S1.EVE_totivirus.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.EVE_totivirus.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87
Sequences flagged as poor quality0
Sequence length27-53
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCAGGCAAAGCTCCACCCGATGTACGGAGGCACATCCCTCTCTCCTTAAA1921.839080459770116No Hit
AGAGCAATCGCTGATGGGAATCCTGTAGTGTGGCTAGGGGAA1314.942528735632186No Hit
AGGAAACTGGCAAAGATTGATGCCTTGGCGTGCGTACCGCG1112.643678160919542No Hit
CTGGAACAAAGAAACCCGCACCACTCCTCGAGAA89.195402298850574No Hit
CACTGGAACAAAGAAACCCGCACCACTCCTCGAGATCA78.045977011494253No Hit
CACTGGAACAAAGAAACCCGCACCACAAAA78.045977011494253No Hit
GACGCAGATTTTGCTGCACAGAACTTGCCGGTCGCCTTCC78.045977011494253No Hit
ATTGCAGGCAAAGCTCCACCCGATGTA44.597701149425287No Hit
TTGCAGGCAAAGCTCCACCCGATGTACGGAGGCACATCCCTCTCTCCTTAAA44.597701149425287No Hit
AGAGCAATCGCTGATGGGAATCCTGTAGTGTGGCTAGGGGA33.4482758620689653No Hit
GGAACAAAGAAACCCGCACCACTCCTCGAGAA11.1494252873563218No Hit
CACTGGAACAAAGAAACCCGCACCACTAAAAA11.1494252873563218No Hit
GGAAACTGGCAAAGATTGATGCCTTGGCGTGCGTACCGCG11.1494252873563218No Hit
GAAACTGGCAAAGATTGATGCCTTGGCGTGCGTACCGCG11.1494252873563218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)