FastQCFastQC Report
Fri 14 Oct 2022
S1.Flavivirus.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.Flavivirus.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences888
Sequences flagged as poor quality0
Sequence length20-116
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCATCGTTTAGGACGATGAGACCAAACGAAAATCAAATTTGATTCACA505.63063063063063No Hit
CTAAACGTTAAATAAGAAACGGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCG495.518018018018018No Hit
TAGCGTTTACGACAAAGAGTCCACCACTAAACGTTAAATAAGAAACGGAA374.166666666666666No Hit
CGGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCG333.7162162162162162No Hit
TTACTACACCATATAAAGACCTTAATGATGTTTGAACTACTGTCATTTCT293.2657657657657655No Hit
CTCACTGGAAACAGGAATATTCTGTAATTATAAGCCTGTGCTATTTCAAGAGTTTTTGCACAGTCGCGGC283.153153153153153No Hit
ACTGCTCCAATTGGACAGCCTAGAAAGCGCACGCACTAGAGCTTCAGGAGTGTTAGGGACATCTGATG283.153153153153153No Hit
CACAACGTCAATAAGACAGTCAGCAACACGAAAATCCACAACCTA273.040540540540541No Hit
TCTCGACAGCACTCTTAGCTTGGGGCCCGCGATAATGACGCTTCCAATTATGTGAGGCGATCATCCGTTCAGCA242.7027027027027026No Hit
ATAGCGTTTACGACAAAGAGTCCACCACTAAACGTTAAATAAGAAACGGA232.59009009009009No Hit
ACCTCGTAGGCCTGATCATAAAAGAAACAGGAACCTGGAGATAGCAAGTA212.364864864864865No Hit
AAAGGTATATTGATTTGTTTTGGTGTATGAAATACAAACACTTGTTTTCTAC202.2522522522522523No Hit
AGAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCG161.8018018018018018No Hit
TAGCAACCACCTCTATAGCATCATTTTTCTGAACTATTCTATACACCC131.4639639639639639No Hit
CGCAATCGGAGTAGCAGTCAAATAAGCCACCTTAGCGGTGACTTCAGGTATGTTGGTGAGAACC111.2387387387387387No Hit
TCCGCGACTGCTGCCCACCCA101.1261261261261262No Hit
AGGTGGCTCCTTAAACATCAGTAATTCTGCGCAA101.1261261261261262No Hit
CAATTCCTAAGTTGACTGAATTCTTCTTGCCGTCAGCGCAAACAA101.1261261261261262No Hit
AATTCTCCGCTACCTGAATTTTCTTGGCAGCGGGGGCGGGGC91.0135135135135136No Hit
TTTCTCATTGAACATAGGCGTCCCAGATATTAGGT91.0135135135135136No Hit
CATCTTTAGGCGTAAACCAGAGATAGAATTCGTCACGTAACA91.0135135135135136No Hit
ATAGGCGTCCCAGATATTAGGTTAGTTTCACTTTCCAACCAAAA91.0135135135135136No Hit
ACTCAAGTGAATTTTCTAATGATCGGCTATA80.9009009009009009No Hit
TTCATCGTTTAGGACGATGAGACCAAACGAAAATCAAATTTGATTCACAG80.9009009009009009No Hit
ACCCTTTCTATTAACATTAACCACCCATTTGACAGT80.9009009009009009No Hit
CCTTTCTCATTGAACATAGGCGTCCCAGATATTAGGTTAGTTTCACTCTCCAACCA70.7882882882882882No Hit
TCTCCACTTGTTCTGATGTCATGTAACGCCACGCACCGCATATTTGAA70.7882882882882882No Hit
TCCTGGTGTGTAGGAATGAGAGCAGAATTTGACCTGTCTAAACT70.7882882882882882No Hit
CTTATTTAACGCGACTCGAACCCAATTCGCTACATCATC70.7882882882882882No Hit
AAACAATCTACAGACAATCCTCTTGCTTTCTCGTGAAATGCTTCATTGGCG70.7882882882882882No Hit
TGCACTCAATACAGCGAGACCGATATAACCATTACCT70.7882882882882882No Hit
AAGAAACGGAAGCACTAGAAACTGAAAGTAAACACCAT70.7882882882882882No Hit
TGGGGTCCCAGACAGCAGTTCTCATCTTTATAGTCATC60.6756756756756757No Hit
ATTCCTTATCTGCACCAGGAATCAGGTTACA60.6756756756756757No Hit
CCGCATAATCCAATCTGGCACTGTCATGACACACAT60.6756756756756757No Hit
TATAGTCAAGCTCAACCGAAACACCAGCCATGTAACC60.6756756756756757No Hit
TAATAGTCCTTGTAGCTCGAAGTCACTAACCT60.6756756756756757No Hit
AAAGAAGCATTGCACCAAGGATCTGTTGAATTGACAACCT50.5630630630630631No Hit
CATCCAACTCGTCATTGATCGCTGATCTACTAATGGCAGCCTTAACAA50.5630630630630631No Hit
CAATTTATGTTGCATATCAGACTCGTACCTACCAGAATGCAGCTTGCTTA50.5630630630630631No Hit
ACGTATAACTCACGTATCTCTTGACACAACCATT50.5630630630630631No Hit
AGCACTAGAAACTGAAAGTAAACACCATCAAAA50.5630630630630631No Hit
GGTGATAGCATTGGCTCCTGTACTGGCACT40.45045045045045046No Hit
CCAACACATCCGAGCGAGCCCCA40.45045045045045046No Hit
CCACTATATGAACAAACTGAGTACTTGGCACCGCT40.45045045045045046No Hit
CCTTTCTCATTGAACATAGGCGTCCCAGATAT40.45045045045045046No Hit
ACTACGCAATCGGCTGTCACCA40.45045045045045046No Hit
GTATCTTTTACCCAGCTCTTATAAA40.45045045045045046No Hit
CATCATCTCAACGACAGCAACCTGGGCCTTCA40.45045045045045046No Hit
CGATCACGAACCGCAAAATTATCAATGGCACC40.45045045045045046No Hit
TCCACTCGAGACCTCATAATC40.45045045045045046No Hit
GGAAGCACTAGAAACTGAAACC30.33783783783783783No Hit
GCAGTTGCTATTACCATTATAAAAAAAC30.33783783783783783No Hit
CCGAGCTCAACAGTCAATTTGGAGT30.33783783783783783No Hit
GAAACTGTAAGCCGCAACGAG30.33783783783783783No Hit
ACAGCGAGACCGATATAACCATTACCTA30.33783783783783783No Hit
TGAACAAACTGAGTACTTGGC30.33783783783783783No Hit
CTGGTAACGTATGATGACATC30.33783783783783783No Hit
TGCAATGAACCCGAATAACCC30.33783783783783783No Hit
TGAGAACCCAGGCTGCTCCGA30.33783783783783783No Hit
CCCATTTGACAGTAGCGGCGCCA30.33783783783783783No Hit
CGACAATAACGACGTATGCCACC30.33783783783783783No Hit
CTGAGGCGCCAGTTTTGATCTTATCGA30.33783783783783783No Hit
CCTCGTAGGCCTGATCATAAAAGAAACAGGAACCTGGAGATAGCAAGTAT20.22522522522522523No Hit
ACCTCGACTGCCAACATTAC20.22522522522522523No Hit
TCCACTCGAGACCTCATAATCA20.22522522522522523No Hit
TCAGTAGTTCTAGCCATGGTA20.22522522522522523No Hit
CAGCAACTCCGCCGATCGCACCA20.22522522522522523No Hit
TGTAATTGAAGGCCGGCACAC20.22522522522522523No Hit
TTTGAATGTTTGTTGGGTACC20.22522522522522523No Hit
AGTAGCAGGCCAAATATTAAG20.22522522522522523No Hit
AAGATTGAACCTGGAGAAGCC20.22522522522522523No Hit
GTCCATGAGTCACCTCTGTAAGTCAA20.22522522522522523No Hit
AGCGGAAAACTCGCCTGGCGTC20.22522522522522523No Hit
CAAGCCCACCGGACCCAGCGC20.22522522522522523No Hit
ACCACTCGTCACAAAGTAGCAGGCCAAATATTAAGAAAA20.22522522522522523No Hit
GTATGACTCGGAGTGTTTCCA20.22522522522522523No Hit
GACAATTGGCCTGTAAGTCAT20.22522522522522523No Hit
TGTTAGGGACATCTGATGAGAA20.22522522522522523No Hit
AACAAACTGAGTACTTGGCAC20.22522522522522523No Hit
TTGTGCAATGAACCCGAATAA20.22522522522522523No Hit
CCGCGACTGCTGCCCACCCAC20.22522522522522523No Hit
ATGAGCACCTGTATACCGGTA20.22522522522522523No Hit
TATCCTAACATCTTCGCCTGC20.22522522522522523No Hit
AATTTATGTTGCATATCAGACTCGTACCTACCAGAATGCAGCTTGCTTAG20.22522522522522523No Hit
TATGCAAGCCCACCGGACCCA20.22522522522522523No Hit
CTCACTGGAAACAGGAATATTCTGTAATTATAAGCCTGTGCTATTTCAAGAGTTTTTGCACAGTCGCGG20.22522522522522523No Hit
CTGCTCCAATTGGACAGCCTAGAAAGCGCACGCACTAGAGCTTCAGGAGTGTTAGGGACATCTGATG20.22522522522522523No Hit
CGGCGCTTAAGATGAACAGAG20.22522522522522523No Hit
GATATCCAATTATGACGCCCT20.22522522522522523No Hit
AAGATTGAACCTGGAGAAGCCC20.22522522522522523No Hit
TCCATGTAATTGAAGGCCGGC20.22522522522522523No Hit
TAATATCAGGCTGCCCAAAAC20.22522522522522523No Hit
AATTCCTAAGTTGACTGAATTCTTCTTGCCGTCAGCGCAAACAA20.22522522522522523No Hit
TGGGGCCCGCGATAATGACG20.22522522522522523No Hit
TTAAAATTCCACTCGAGACCT20.22522522522522523No Hit
TTGTTGTATGTTTTATCGCCCCTTCACGT20.22522522522522523No Hit
CATGAAGCTGGCAGCGAGAGC20.22522522522522523No Hit
ACAGGACGAGAACAAGGTTGA20.22522522522522523No Hit
TACAGGACGAGAACAAGGTTGATG20.22522522522522523No Hit
TATGGCACGTATACTATCAAA20.22522522522522523No Hit
ATAGCATTGGCTCCTGTACTG20.22522522522522523No Hit
TGTCCCATGCTCTCCTCCATCAGT20.22522522522522523No Hit
GGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCG20.22522522522522523No Hit
CAATGAACCCGAATAACCCA10.11261261261261261No Hit
TTGCCTTAGCACCTCGACTGC10.11261261261261261No Hit
AAACTGAAAGTAAACACCATCAAAAACACAACTATACTCG10.11261261261261261No Hit
CAACAACGCATGGCACTTCTC10.11261261261261261No Hit
CGTTTTCCTGATAACTTAAATTGAA10.11261261261261261No Hit
ATTGAACAGTAGGTGCCTTG10.11261261261261261No Hit
AAACTGAGTACTTGGCACCGC10.11261261261261261No Hit
CTCTTTTATTGGCGCTGGGAA10.11261261261261261No Hit
ATCCAACTCGTCATTGATCGCTGATCTACTAATGGCAGCCTTAACAA10.11261261261261261No Hit
TCTCCACTTGTTCTGATGTCATGTAACGCCACGCACCGCATATTTGA10.11261261261261261No Hit
ACGACGTATGCCACCAGAGAC10.11261261261261261No Hit
GACAGTAGCGGCGCTTAAGATGAA10.11261261261261261No Hit
TAATAAACCGGACGTACTTCC10.11261261261261261No Hit
TATTGATTTCATGGCCCCTGC10.11261261261261261No Hit
CCTTTCTTAACTTTCCATCTG10.11261261261261261No Hit
AGGACGAGAACAAGGTTGATGCA10.11261261261261261No Hit
CACCACTCATTGAGCCCAGAA10.11261261261261261No Hit
CATCCAATCAGGTTTCCACTC10.11261261261261261No Hit
TCCGGAAATTCATCAATGAAC10.11261261261261261No Hit
TTGGTAGCCTCTTCATTTTCC10.11261261261261261No Hit
AATTATGACGCCCTGCACTTC10.11261261261261261No Hit
CGGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCGAG10.11261261261261261No Hit
TCCGCCGATCGCACTCAACACC10.11261261261261261No Hit
GTTCCCGCGATTAATTCTTCCTG10.11261261261261261No Hit
TGAGGCTCCTGATGTACTGAC10.11261261261261261No Hit
CTGCCCAAAACTATCATATGACC10.11261261261261261No Hit
GCAATGAACCCGAATAACCCA10.11261261261261261No Hit
TCATTGAACATAGGCGTCCCA10.11261261261261261No Hit
ACCAAGTAACAGAGCCAATTG10.11261261261261261No Hit
TCAACCGAAACACCAGCCATG10.11261261261261261No Hit
CCTGGTGTGTAGGAATGAGAGCAGAATTTGACCTGTCTAAACT10.11261261261261261No Hit
ACCATAACGAAGTTGCTAGCAC10.11261261261261261No Hit
CAATTCCACCTATGGCACCTC10.11261261261261261No Hit
ACCCGTTGGAAGTCCCTGCTC10.11261261261261261No Hit
CAACCTACCCCGTTCTATGCG10.11261261261261261No Hit
CGTGTAACTCATACCTGGTAT10.11261261261261261No Hit
AATAGTCCTTGTAGCTCGAAGTCACTAACC10.11261261261261261No Hit
TAGGCGTCCCAGATATTAGGTTAGTTTCACTTTCCAACCAAAA10.11261261261261261No Hit
CTGCGACTCCAACACATCCGA10.11261261261261261No Hit
TTCTCAGCGTCGAACCAAAAA10.11261261261261261No Hit
GAGGCTCCTGATGTACTGAC10.11261261261261261No Hit
CGTTCATTAAAATTCCACTCG10.11261261261261261No Hit
AAAGAAGCATTGCACCAAGGATCTGTTGAAATGACAACCT10.11261261261261261No Hit
TCCACTCGAGACCTCATAATTT10.11261261261261261No Hit
GGAGCACCTTCGTCTGCGCTGA10.11261261261261261No Hit
CATCTTTAGGCGTAAACCAGAGATAGAATTCGTCACGTAA10.11261261261261261No Hit
TGTACGACGCGACCAGGTGGC10.11261261261261261No Hit
AAACGTTAAATAAGAAACGGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCG10.11261261261261261No Hit
TCGGAATCCGTAATTGCCCCG10.11261261261261261No Hit
CGTATAACTCACGTATCTCTTGACACAACCATT10.11261261261261261No Hit
CATTGAACATAGGCGTCCCAG10.11261261261261261No Hit
ATAGGTATAAAGACATTAAAC10.11261261261261261No Hit
AAGAAACGGAAGCACTAGAAACTGAAAGTAAACACCA10.11261261261261261No Hit
TCTCGTGATATTCTGGTTGGTCTC10.11261261261261261No Hit
AACTGCTGGGCCTCGACATTC10.11261261261261261No Hit
TGTTATGTCCACACACCCGCCA10.11261261261261261No Hit
CTTTCTTTATTCCTGCTAAC10.11261261261261261No Hit
TGATCCCGAAACTTTAGCTTGAGCC10.11261261261261261No Hit
CTAAACGTTAAATAAGAAACGGAAGCACTAGAAACTGGAAGTAAACACCATCAAAAACACAACTATACTCG10.11261261261261261No Hit
CAATGAACCCGAATAACCCAG10.11261261261261261No Hit
GTTCTAATATCAGGCTGCCCA10.11261261261261261No Hit
TGCGACTCCAACACATCCGAG10.11261261261261261No Hit
ATTTGATTCCTTATCTGCACC10.11261261261261261No Hit
TTACTACACCATATAAAGACCTTAATGATGTTTGAACTACT10.11261261261261261No Hit
AATTGAAGGCCGGCACACTC10.11261261261261261No Hit
GACCACTAGACTCACACCGGG10.11261261261261261No Hit
AAACGTTAAATAAGAAACGGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACAATACTCG10.11261261261261261No Hit
AATCTGGCACTGTCATGACAC10.11261261261261261No Hit
ACTGCTCCAATTGGACAGCCTAGAAAGCGCACGCACTATAGCTACAGGAGTGTTAGGGACATCTGATG10.11261261261261261No Hit
CATCATCTCAACGACAGCAACCTGGGCCTTC10.11261261261261261No Hit
CACCGAAGCCCACTCCATCGC10.11261261261261261No Hit
TAAACGTTAAATAAGAAACGGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCG10.11261261261261261No Hit
ACTGCTCCAATTGGACAGCCTAGAAAGCGCACGCACTAGAGCTTCAGGAGTGGTAGGGACATCTGATG10.11261261261261261No Hit
GTTTGGAACAGGCGCTCGGTC10.11261261261261261No Hit
TAAACGTTAAATAAGAAACGGAAGCACTAGAAACTGAAAGTAAACACCAACAAAAACACAACTATACTCG10.11261261261261261No Hit
CAGCGCGGCAGACATGGCACCATCAGAAATATAA10.11261261261261261No Hit
CTAAACGTTAAATAAGAAACGGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACCATACTCG10.11261261261261261No Hit
ACTACGCAATCGGCTGTCACC10.11261261261261261No Hit
ATCAGCTATGAATGATATGGCTACACTGATCAATGATAATGGA10.11261261261261261No Hit
CTCAATACTGTTGACATCACC10.11261261261261261No Hit
TCCTGGTGTGTAGGAATGAGAGCAGAATTTGACCTGTCTAAAC10.11261261261261261No Hit
TTTCCTTAGCACCTCGACTGC10.11261261261261261No Hit
ACCGATTACGACAAAGAGTCCACCACTAAACGTTAAATAAGAAACGGAAG10.11261261261261261No Hit
TGACCGATGCGAGTGAGAGCG10.11261261261261261No Hit
ACCAGTCCGGAAATTCATCAAA10.11261261261261261No Hit
CGCCGAAGATAGTTGTACCGC10.11261261261261261No Hit
CGACTGCTGCCCACCCACTTG10.11261261261261261No Hit
CGATTCTCAACTTCTCGCCCA10.11261261261261261No Hit
AAGGTATATTGATTTGTTTTGGTGTATGAAATACAAACACTTGTTTTCTAC10.11261261261261261No Hit
TCAATGAGCACCTGTATACCG10.11261261261261261No Hit
CGTCCAAAACGAAGCCATCCAC10.11261261261261261No Hit
CAGTAGTTCTAGCCATGGTATCCA10.11261261261261261No Hit
ATTAACCACCCATTTGACAG10.11261261261261261No Hit
CTAAACGTTAAATAATAAACGGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCG10.11261261261261261No Hit
TTACTACACCATATAAAGACCTTAATGATGTTTGAACTACTGGCATTTCT10.11261261261261261No Hit
TACCGAAATCGACCACTAGAC10.11261261261261261No Hit
GAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCG10.11261261261261261No Hit
CCAATTATGACGCCCTGCACTA10.11261261261261261No Hit
CTAAACGTTAAATAAGAAACGGAAGCACTAGAAACTGAAAGTAGACACCATCAAAAACACAACTATACTCG10.11261261261261261No Hit
CACACCGGGGACAGTGATAGC10.11261261261261261No Hit
GCGACTCCAACACATCCGAG10.11261261261261261No Hit
AAACTGTAAGCCGCAACGAGC10.11261261261261261No Hit
CGTTAAGTAGGTTCCCGCGCAC10.11261261261261261No Hit
GTAATTGAAGGCCGGCACAC10.11261261261261261No Hit
CTCAAGTGAATTTTCTAATGATCGGCTATA10.11261261261261261No Hit
TGAGTAGTCGAAACATGCGAC10.11261261261261261No Hit
TCTCGACAGCACTCTTAGCTTGGGGCCCGCGATAATGACGCTACCAATTATGTGAGGCGATCATCCGTTCAGCA10.11261261261261261No Hit
TCGAAAGCCGCCTTATCCTTACCA10.11261261261261261No Hit
TCTCCACTTGTTCTGATGTCATGTAACGCCACGCACCGCATATTTG10.11261261261261261No Hit
CTCGACAGCACTCTTAGCTTGGGGCCCGCGATAATGACGCTTCCAATTATGTGAGGCGATCATCCGTTCAGCA10.11261261261261261No Hit
GTGGGCCAGTCTAGAAGCGTTACT10.11261261261261261No Hit
TTTCATCGTTTAGGACGATGAGACCAAACGAAAATCAAATTTGATTCACA10.11261261261261261No Hit
CAGGCGTGGCACTCAATAGTA10.11261261261261261No Hit
TCTCATTGAACATAGGCGTCCC10.11261261261261261No Hit
TATAGTCAAGCTCAACCGAAACACCAGCCATGTAAC10.11261261261261261No Hit
CGGATACAACACAAGATATGA10.11261261261261261No Hit
AATAGTCCTTGTAGCTCGAAGTCACTAACCT10.11261261261261261No Hit
GAGCACCTTCGTCTGCGCTG10.11261261261261261No Hit
TCATGAAGCTGGCAGCGAGAG10.11261261261261261No Hit
CTATACTTGGCCACCTTATGG10.11261261261261261No Hit
CTTTCTCATTGAACATAGGCGTCCCAGATA10.11261261261261261No Hit
ACCTGAAGCATTTCCTGAACG10.11261261261261261No Hit
TTAAGGCGGACGAAGAAATGT10.11261261261261261No Hit
TTGGGGCCCGCGATAATGACG10.11261261261261261No Hit
TAACCACTTATTTACCTCGTC10.11261261261261261No Hit
CAATCGGAGTAGCAGTCAAATAAGCCACCTTAGCGGTGACTTCAGGTATGTTGGTGAGAAC10.11261261261261261No Hit
GGTGGCTCCTTAAACATCAGTAATTCTGCGCAA10.11261261261261261No Hit
TAAGGCGGACGAAGAAATGTC10.11261261261261261No Hit
CTAAACGTTAAATAAGAAACGGAAGCACTAGAAACTGAAAGTAAACACCATCAAAAACACAACTATACTCGAG10.11261261261261261No Hit
AGAAACGGAAGCACTAGAAACTGAAAGTAAACACCAT10.11261261261261261No Hit
AACGTTAAATAAGAAACGGAAGCACTAGAAACTCAAAGTAAACACCATCAAAAACACAACTATACACC10.11261261261261261No Hit

[OK]Adapter Content

Adapter graph