##FastQC	0.11.9
>>Basic Statistics	pass
#Measure	Value
Filename	S1_Sudafrica.Sobemovirus_Segment_1.15-35nt.new.forward-mapped.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	47
Sequences flagged as poor quality	0
Sequence length	20-35
%GC	55
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	37.0	NaN	NaN	NaN	NaN	NaN
2	32.91489361702128	NaN	NaN	NaN	NaN	NaN
3	35.38297872340426	NaN	NaN	NaN	NaN	NaN
4	36.234042553191486	NaN	NaN	NaN	NaN	NaN
5	35.38297872340426	NaN	NaN	NaN	NaN	NaN
6	35.08510638297872	NaN	NaN	NaN	NaN	NaN
7	36.234042553191486	NaN	NaN	NaN	NaN	NaN
8	35.170212765957444	NaN	NaN	NaN	NaN	NaN
9	34.40425531914894	NaN	NaN	NaN	NaN	NaN
10	36.234042553191486	NaN	NaN	NaN	NaN	NaN
11	35.93617021276596	NaN	NaN	NaN	NaN	NaN
12	35.170212765957444	NaN	NaN	NaN	NaN	NaN
13	35.638297872340424	NaN	NaN	NaN	NaN	NaN
14	36.48936170212766	NaN	NaN	NaN	NaN	NaN
15	34.276595744680854	NaN	NaN	NaN	NaN	NaN
16	35.93617021276596	NaN	NaN	NaN	NaN	NaN
17	35.42553191489362	NaN	NaN	NaN	NaN	NaN
18	35.723404255319146	NaN	NaN	NaN	NaN	NaN
19	35.170212765957444	NaN	NaN	NaN	NaN	NaN
20	35.97872340425532	NaN	NaN	NaN	NaN	NaN
21	34.77272727272727	NaN	NaN	NaN	NaN	NaN
22	34.37931034482759	NaN	NaN	NaN	NaN	NaN
23	34.76470588235294	NaN	NaN	NaN	NaN	NaN
24	35.4	NaN	NaN	NaN	NaN	NaN
25	33.0	NaN	NaN	NaN	NaN	NaN
26	34.23076923076923	NaN	NaN	NaN	NaN	NaN
27	34.0	NaN	NaN	NaN	NaN	NaN
28	33.0	NaN	NaN	NaN	NaN	NaN
29	35.0	NaN	NaN	NaN	NaN	NaN
30	31.833333333333332	NaN	NaN	NaN	NaN	NaN
31	33.4	NaN	NaN	NaN	NaN	NaN
32	35.8	NaN	NaN	NaN	NaN	NaN
33	35.5	NaN	NaN	NaN	NaN	NaN
34	37.0	NaN	NaN	NaN	NaN	NaN
35	37.0	NaN	NaN	NaN	NaN	NaN
>>END_MODULE
>>Per tile sequence quality	fail
#Tile	Base	Mean
2113	1	0.0
2113	2	-19.5
2113	3	0.0
2113	4	0.0
2113	5	0.0
2113	6	0.0
2113	7	0.0
2113	8	0.0
2113	9	0.0
2113	10	0.0
2113	11	0.0
2113	12	0.0
2113	13	0.0
2113	14	0.0
2113	15	0.0
2113	16	0.0
2113	17	0.0
2113	18	0.0
2113	19	0.0
2113	20	0.0
2113	21	0.0
2113	22	27.75
2159	1	0.0
2159	2	6.5
2159	3	0.0
2159	4	0.0
2159	5	0.0
2159	6	0.0
2159	7	0.0
2159	8	0.0
2159	9	0.0
2159	10	0.0
2159	11	0.0
2159	12	0.0
2159	13	0.0
2159	14	0.0
2159	15	0.0
2159	16	0.0
2159	17	0.0
2159	18	0.0
2159	19	0.0
2159	20	0.0
2159	21	0.0
2159	22	-9.25
2242	1	0.0
2242	2	6.5
2242	3	0.0
2242	4	0.0
2242	5	0.0
2242	6	0.0
2242	7	0.0
2242	8	0.0
2242	9	0.0
2242	10	0.0
2242	11	0.0
2242	12	0.0
2242	13	0.0
2242	14	0.0
2242	15	0.0
2242	16	0.0
2242	17	0.0
2242	18	0.0
2242	19	0.0
2242	20	0.0
2242	21	0.0
2242	22	-9.25
2245	1	0.0
2245	2	6.5
2245	3	0.0
2245	4	0.0
2245	5	0.0
2245	6	0.0
2245	7	0.0
2245	8	0.0
2245	9	0.0
2245	10	0.0
2245	11	0.0
2245	12	0.0
2245	13	0.0
2245	14	0.0
2245	15	0.0
2245	16	0.0
2245	17	0.0
2245	18	0.0
2245	19	0.0
2245	20	0.0
2245	21	0.0
2245	22	-9.25
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
31	2.0
32	2.0
33	6.0
34	7.0
35	7.0
36	4.0
37	19.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	14.893617021276595	21.27659574468085	38.297872340425535	25.53191489361702
2	6.382978723404255	21.27659574468085	25.53191489361702	46.808510638297875
3	27.659574468085108	17.02127659574468	17.02127659574468	38.297872340425535
4	27.659574468085108	19.148936170212767	12.76595744680851	40.42553191489361
5	31.914893617021278	25.53191489361702	14.893617021276595	27.659574468085108
6	23.404255319148938	36.17021276595745	8.51063829787234	31.914893617021278
7	40.42553191489361	23.404255319148938	27.659574468085108	8.51063829787234
8	12.76595744680851	36.17021276595745	19.148936170212767	31.914893617021278
9	10.638297872340425	34.04255319148936	17.02127659574468	38.297872340425535
10	25.53191489361702	17.02127659574468	12.76595744680851	44.680851063829785
11	25.53191489361702	10.638297872340425	19.148936170212767	44.680851063829785
12	29.78723404255319	19.148936170212767	19.148936170212767	31.914893617021278
13	17.02127659574468	17.02127659574468	25.53191489361702	40.42553191489361
14	21.27659574468085	23.404255319148938	19.148936170212767	36.17021276595745
15	21.27659574468085	21.27659574468085	17.02127659574468	40.42553191489361
16	25.53191489361702	23.404255319148938	27.659574468085108	23.404255319148938
17	14.893617021276595	27.659574468085108	17.02127659574468	40.42553191489361
18	10.638297872340425	31.914893617021278	14.893617021276595	42.5531914893617
19	17.02127659574468	29.78723404255319	19.148936170212767	34.04255319148936
20	23.404255319148938	25.53191489361702	12.76595744680851	38.297872340425535
21	20.454545454545457	25.0	13.636363636363635	40.909090909090914
22	17.24137931034483	10.344827586206897	24.137931034482758	48.275862068965516
23	17.647058823529413	35.294117647058826	23.52941176470588	23.52941176470588
24	33.33333333333333	13.333333333333334	26.666666666666668	26.666666666666668
25	0.0	30.76923076923077	38.46153846153847	30.76923076923077
26	15.384615384615385	38.46153846153847	15.384615384615385	30.76923076923077
27	8.333333333333332	25.0	25.0	41.66666666666667
28	25.0	25.0	33.33333333333333	16.666666666666664
29	0.0	25.0	33.33333333333333	41.66666666666667
30	8.333333333333332	33.33333333333333	16.666666666666664	41.66666666666667
31	40.0	40.0	0.0	20.0
32	10.0	30.0	10.0	50.0
33	25.0	12.5	25.0	37.5
34	0.0	57.14285714285714	42.857142857142854	0.0
35	0.0	0.0	25.0	75.0
>>END_MODULE
>>Per sequence GC content	fail
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	0.0
29	0.0
30	0.0
31	0.0
32	0.0
33	0.0
34	0.0
35	0.0
36	0.0
37	0.0
38	0.5
39	1.0
40	1.5
41	1.5
42	2.0
43	4.5
44	6.5
45	7.0
46	8.0
47	10.0
48	8.5
49	5.0
50	7.0
51	10.0
52	11.0
53	11.0
54	10.0
55	6.0
56	1.5
57	0.5
58	0.0
59	0.5
60	2.5
61	6.0
62	8.0
63	7.5
64	5.0
65	3.0
66	3.0
67	3.5
68	5.0
69	7.5
70	8.0
71	7.0
72	6.5
73	5.5
74	3.5
75	1.5
76	1.0
77	1.0
78	1.0
79	1.0
80	0.5
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	0.0
29	0.0
30	0.0
31	0.0
32	0.0
33	0.0
34	0.0
35	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
20	3.0
21	15.0
22	12.0
23	2.0
24	2.0
25	0.0
26	1.0
27	0.0
28	0.0
29	0.0
30	2.0
31	0.0
32	2.0
33	1.0
34	3.0
35	4.0
>>END_MODULE
>>Sequence Duplication Levels	pass
#Total Deduplicated Percentage	82.97872340425532
#Duplication Level	Percentage of deduplicated	Percentage of total
1	84.61538461538461	70.2127659574468
2	10.256410256410255	17.02127659574468
3	5.128205128205128	12.76595744680851
4	0.0	0.0
5	0.0	0.0
6	0.0	0.0
7	0.0	0.0
8	0.0	0.0
9	0.0	0.0
>10	0.0	0.0
>50	0.0	0.0
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
TACAGAGAACCGTCCGACAAC	3	6.382978723404255	No Hit
CCGCAAAAACTCCTCCGCCCGC	3	6.382978723404255	No Hit
TCCGCAGCCGCTGTACCCACC	2	4.25531914893617	No Hit
ACAGAGAACCGTCCGACAACA	2	4.25531914893617	No Hit
TCTCCGGTAGACCATGCAGCCC	2	4.25531914893617	No Hit
TTGCCCTCAAGAACAATCTCCT	2	4.25531914893617	No Hit
AACGCCTGCTCCAGTAACGCCC	1	2.127659574468085	No Hit
TATCCGCAGCCGCTGTACCCA	1	2.127659574468085	No Hit
GTCGGCTACACTCAATTCAGTCTGTACACCACTA	1	2.127659574468085	No Hit
ACACACAGCCGGATTTCATGA	1	2.127659574468085	No Hit
GCTCCGGACTCACGCCCATC	1	2.127659574468085	No Hit
CCGCTAGGGCCACGCGCGCTCGGGACTCCTGG	1	2.127659574468085	No Hit
ACGCGCGCTCGGGACTCCTGGTA	1	2.127659574468085	No Hit
GCCTTAGAGGCGTTCAGGCGTAAT	1	2.127659574468085	No Hit
GCCCGGGACTCCTGGTATTGTCGTCGCCTACACTC	1	2.127659574468085	No Hit
GCCTGGATCCTCTGAGGGGG	1	2.127659574468085	No Hit
GTCGCCTACACTCAATTCAGTCTGTACACCACTAC	1	2.127659574468085	No Hit
TACTACACTCAATTCAGTCTGTACACCACTACGA	1	2.127659574468085	No Hit
TTGCGACCTCGACCCGTTCAC	1	2.127659574468085	No Hit
CTACACTCAATTCAGTCTGTACACCACTAC	1	2.127659574468085	No Hit
TGGTATTGTCGTCGCCTACAC	1	2.127659574468085	No Hit
CCGTTCTTCCGCGCCTCGGAC	1	2.127659574468085	No Hit
CAGAGAACCGTCCGACAACAT	1	2.127659574468085	No Hit
TACAGAGAACCGTCCGACAA	1	2.127659574468085	No Hit
TCACGTGACCGCGAGGGCCACGCG	1	2.127659574468085	No Hit
ATTGTCGTCGCCTACACTCAAT	1	2.127659574468085	No Hit
CTGGTATTGTCGTCGCCTACACTCAATTCAGTCT	1	2.127659574468085	No Hit
ACGCGCGCTCGGGACTCCTGAG	1	2.127659574468085	No Hit
CTCGTCGCCTACACTCAATTCAGTCTGTACACCAC	1	2.127659574468085	No Hit
TCCGACACTGCTGCTTCCGAGTC	1	2.127659574468085	No Hit
AATGACGGAGCCAAACAGAGC	1	2.127659574468085	No Hit
GTATTGTCGTCGCCTACACTCAATTCAGTC	1	2.127659574468085	No Hit
ACTACGATTAGAACGGATACGGCCTTAGAGGCGTT	1	2.127659574468085	No Hit
CTCAATTCAGTCTGTACACCACTACGATTAGAA	1	2.127659574468085	No Hit
CACACATTCGCGTCCGACCGA	1	2.127659574468085	No Hit
TGTCGTCGCCTACAATCAATTCAGTCTGTACA	1	2.127659574468085	No Hit
AGAACGGATACGGCCTTAGAGG	1	2.127659574468085	No Hit
TCCGGACCAATGAGGTAATCAT	1	2.127659574468085	No Hit
CTACGATTAGAACGGATACGGCCAAA	1	2.127659574468085	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10	0.0	0.0	0.0	0.0	0.0
11	0.0	0.0	0.0	0.0	0.0
12	0.0	0.0	0.0	0.0	0.0
13	0.0	0.0	0.0	0.0	0.0
14	0.0	0.0	0.0	0.0	0.0
15	0.0	0.0	0.0	0.0	0.0
16	0.0	0.0	0.0	0.0	0.0
17	0.0	0.0	0.0	0.0	0.0
18	0.0	0.0	0.0	0.0	0.0
19	0.0	0.0	0.0	0.0	0.0
20	0.0	0.0	0.0	0.0	0.0
21	0.0	0.0	0.0	0.0	0.0
22	0.0	0.0	0.0	0.0	0.0
23	0.0	0.0	0.0	0.0	0.0
24	0.0	0.0	0.0	0.0	0.0
>>END_MODULE
