##FastQC	0.11.9
>>Basic Statistics	pass
#Measure	Value
Filename	S1_Sudafrica.Sobemovirus_segmet_2.15-35nt.reverse-mapped.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	69
Sequences flagged as poor quality	0
Sequence length	15-23
%GC	55
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	37.0	NaN	NaN	NaN	NaN	NaN
2	34.65217391304348	NaN	NaN	NaN	NaN	NaN
3	34.594202898550726	NaN	NaN	NaN	NaN	NaN
4	35.69565217391305	NaN	NaN	NaN	NaN	NaN
5	35.927536231884055	NaN	NaN	NaN	NaN	NaN
6	36.27536231884058	NaN	NaN	NaN	NaN	NaN
7	35.31884057971015	NaN	NaN	NaN	NaN	NaN
8	36.65217391304348	NaN	NaN	NaN	NaN	NaN
9	35.52173913043478	NaN	NaN	NaN	NaN	NaN
10	37.0	NaN	NaN	NaN	NaN	NaN
11	36.82608695652174	NaN	NaN	NaN	NaN	NaN
12	36.82608695652174	NaN	NaN	NaN	NaN	NaN
13	35.927536231884055	NaN	NaN	NaN	NaN	NaN
14	36.44927536231884	NaN	NaN	NaN	NaN	NaN
15	36.27536231884058	NaN	NaN	NaN	NaN	NaN
16	36.088235294117645	NaN	NaN	NaN	NaN	NaN
17	35.96774193548387	NaN	NaN	NaN	NaN	NaN
18	36.12280701754386	NaN	NaN	NaN	NaN	NaN
19	36.76470588235294	NaN	NaN	NaN	NaN	NaN
20	37.0	NaN	NaN	NaN	NaN	NaN
21	37.0	NaN	NaN	NaN	NaN	NaN
22	37.0	NaN	NaN	NaN	NaN	NaN
23	37.0	NaN	NaN	NaN	NaN	NaN
>>END_MODULE
>>Per tile sequence quality	pass
#Tile	Base	Mean
2123	1	0.0
2123	2	0.0
2123	3	NaN
2123	4	0.0
2123	5	0.0
2123	6	0.0
2123	7	0.0
2123	8	0.0
2123	9	0.0
2123	10	0.0
2123	11	0.0
2123	12	0.0
2123	13	0.0
2123	14	0.0
2123	15	0.0
2123	16	0.0
2123	17	0.0
2123	18	0.0
2123	19	0.0
2123	20	0.0
2123	21	0.0
2123	22	3.6
2124	1	0.0
2124	2	0.0
2124	3	NaN
2124	4	0.0
2124	5	0.0
2124	6	0.0
2124	7	0.0
2124	8	0.0
2124	9	0.0
2124	10	0.0
2124	11	0.0
2124	12	0.0
2124	13	0.0
2124	14	0.0
2124	15	0.0
2124	16	0.0
2124	17	0.0
2124	18	0.0
2124	19	0.0
2124	20	0.0
2124	21	0.0
2124	22	-2.4
2161	1	0.0
2161	2	0.0
2161	3	NaN
2161	4	0.0
2161	5	0.0
2161	6	0.0
2161	7	0.0
2161	8	0.0
2161	9	0.0
2161	10	0.0
2161	11	0.0
2161	12	0.0
2161	13	0.0
2161	14	0.0
2161	15	0.0
2161	16	0.0
2161	17	0.0
2161	18	0.0
2161	19	0.0
2161	20	0.0
2161	21	0.0
2161	22	-2.4
2169	1	0.0
2169	2	0.0
2169	3	NaN
2169	4	0.0
2169	5	0.0
2169	6	0.0
2169	7	0.0
2169	8	0.0
2169	9	0.0
2169	10	0.0
2169	11	0.0
2169	12	0.0
2169	13	0.0
2169	14	0.0
2169	15	0.0
2169	16	0.0
2169	17	0.0
2169	18	0.0
2169	19	0.0
2169	20	0.0
2169	21	0.0
2169	22	3.6
2244	1	0.0
2244	2	0.0
2244	3	NaN
2244	4	0.0
2244	5	0.0
2244	6	0.0
2244	7	0.0
2244	8	0.0
2244	9	0.0
2244	10	0.0
2244	11	0.0
2244	12	0.0
2244	13	0.0
2244	14	0.0
2244	15	0.0
2244	16	0.0
2244	17	0.0
2244	18	0.0
2244	19	0.0
2244	20	0.0
2244	21	0.0
2244	22	-2.4
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
28	1.0
29	0.0
30	0.0
31	2.0
32	2.0
33	2.0
34	2.0
35	11.0
36	8.0
37	41.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	21.73913043478261	37.68115942028986	10.144927536231885	30.434782608695656
2	17.391304347826086	34.78260869565217	20.28985507246377	27.536231884057973
3	26.08695652173913	36.231884057971016	18.84057971014493	18.84057971014493
4	36.231884057971016	23.18840579710145	18.84057971014493	21.73913043478261
5	18.84057971014493	24.637681159420293	11.594202898550725	44.927536231884055
6	20.28985507246377	30.434782608695656	15.942028985507244	33.33333333333333
7	28.985507246376812	28.985507246376812	20.28985507246377	21.73913043478261
8	15.942028985507244	21.73913043478261	27.536231884057973	34.78260869565217
9	26.08695652173913	13.043478260869565	20.28985507246377	40.57971014492754
10	33.33333333333333	17.391304347826086	13.043478260869565	36.231884057971016
11	11.594202898550725	27.536231884057973	18.84057971014493	42.028985507246375
12	21.73913043478261	27.536231884057973	20.28985507246377	30.434782608695656
13	11.594202898550725	26.08695652173913	30.434782608695656	31.88405797101449
14	15.942028985507244	20.28985507246377	27.536231884057973	36.231884057971016
15	24.637681159420293	26.08695652173913	21.73913043478261	27.536231884057973
16	26.47058823529412	33.82352941176471	7.352941176470589	32.35294117647059
17	14.516129032258066	27.419354838709676	16.129032258064516	41.935483870967744
18	14.035087719298245	31.57894736842105	19.298245614035086	35.08771929824561
19	23.52941176470588	19.607843137254903	13.725490196078432	43.13725490196079
20	16.0	36.0	6.0	42.0
21	8.51063829787234	21.27659574468085	10.638297872340425	59.57446808510638
22	6.25	25.0	0.0	68.75
23	25.0	75.0	0.0	0.0
>>END_MODULE
>>Per sequence GC content	fail
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	0.0
29	0.0
30	0.5
31	1.0
32	1.0
33	1.0
34	2.5
35	4.0
36	4.0
37	3.5
38	3.0
39	3.0
40	5.5
41	7.5
42	7.0
43	9.0
44	12.0
45	11.5
46	11.0
47	12.0
48	12.0
49	12.0
50	11.0
51	10.0
52	8.0
53	5.5
54	4.5
55	6.5
56	10.0
57	12.0
58	14.0
59	15.5
60	16.5
61	16.5
62	15.5
63	14.5
64	10.5
65	7.0
66	6.5
67	6.0
68	5.5
69	4.0
70	3.5
71	4.0
72	4.0
73	3.5
74	2.0
75	0.5
76	0.0
77	0.0
78	0.0
79	0.5
80	1.0
81	1.0
82	1.0
83	0.5
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
15	1.0
16	6.0
17	5.0
18	6.0
19	1.0
20	3.0
21	31.0
22	12.0
23	4.0
>>END_MODULE
>>Sequence Duplication Levels	pass
#Total Deduplicated Percentage	72.46376811594203
#Duplication Level	Percentage of deduplicated	Percentage of total
1	68.0	49.275362318840585
2	26.0	37.68115942028986
3	6.0	13.043478260869565
4	0.0	0.0
5	0.0	0.0
6	0.0	0.0
7	0.0	0.0
8	0.0	0.0
9	0.0	0.0
>10	0.0	0.0
>50	0.0	0.0
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
ACCGAAATCGTGAACTCAGAA	3	4.3478260869565215	No Hit
GAAGACATCGCCCTCCACTCC	3	4.3478260869565215	No Hit
AAAGAGACCGTAAAAG	3	4.3478260869565215	No Hit
ACTCCTGCTGCACCAAG	2	2.898550724637681	No Hit
TCTTCCTCTTGCGCGCCTTCC	2	2.898550724637681	No Hit
ACCACTGGCGCGTCTGCAACC	2	2.898550724637681	No Hit
CGACTGTCACCGACGCCA	2	2.898550724637681	No Hit
GAGCCCATGAATCTGATCACCA	2	2.898550724637681	No Hit
GAAAAGAGACCGTAAAAGAGC	2	2.898550724637681	No Hit
AGAGCCCATGAATCTGATCACC	2	2.898550724637681	No Hit
AGAGCCCATGAATCTGATCACCA	2	2.898550724637681	No Hit
CGAAAAGAGACCGTAAAAGAGC	2	2.898550724637681	No Hit
CTGTGAGATCGAAATCC	2	2.898550724637681	No Hit
CATTCTTCCTCTTGCGCGCCT	2	2.898550724637681	No Hit
CCATTCTTCCTCTTGCGCGCC	2	2.898550724637681	No Hit
CAGGCAGAGGGTCAAACACGA	2	2.898550724637681	No Hit
AAAAGAGACCGTAAA	1	1.4492753623188406	No Hit
CTCCCAGACGATCGCACCCG	1	1.4492753623188406	No Hit
GCAGAGGGTCAAACACGAGAC	1	1.4492753623188406	No Hit
GACACCCCCTTCAGAAAA	1	1.4492753623188406	No Hit
GAGCCCATGAATCTGATCA	1	1.4492753623188406	No Hit
ATCGCGGGCCCATTCTTCCTC	1	1.4492753623188406	No Hit
TATGGCCCCCCCTCGGATTCAC	1	1.4492753623188406	No Hit
CGGCGTTTCCCCCTCCCAGAC	1	1.4492753623188406	No Hit
TCGAAATCCCAGTCAACACCG	1	1.4492753623188406	No Hit
GAGCCCATGAATCTGATCACC	1	1.4492753623188406	No Hit
CCATTCTTCCTCTTGCGCGCCA	1	1.4492753623188406	No Hit
CCCATGAATCTGATCA	1	1.4492753623188406	No Hit
CTCACGCGACACGGGGCCCAT	1	1.4492753623188406	No Hit
ATGGCCCCCCCTCGGATTCAT	1	1.4492753623188406	No Hit
GTTTGTCCAAAAGCAAAAGGGG	1	1.4492753623188406	No Hit
ATCGCAAGGTTCCCCGGGCT	1	1.4492753623188406	No Hit
TTCTTCCTCTTGCGCGCC	1	1.4492753623188406	No Hit
AATATGGCCCCCCCTCGGATT	1	1.4492753623188406	No Hit
ATCGCGGGCCCATTCTTC	1	1.4492753623188406	No Hit
ATACCACTGGCGCGTCTGCAA	1	1.4492753623188406	No Hit
GCGTCTGCAACCTCTCCCTACCA	1	1.4492753623188406	No Hit
TCTCAACCACCGCGTATCCAC	1	1.4492753623188406	No Hit
CTATGAACTCCTGCTGCACCA	1	1.4492753623188406	No Hit
GAGCCCATGAATCTGATCACACG	1	1.4492753623188406	No Hit
AGAGCCCATGAATCTGATCACA	1	1.4492753623188406	No Hit
CGGCGTTTCCCCCTCCCAGACC	1	1.4492753623188406	No Hit
AGAGGAGAAGACATCGCC	1	1.4492753623188406	No Hit
AAGAGACCGTAAAAGAGCCCA	1	1.4492753623188406	No Hit
AAGACATCGCCCTCCACTCC	1	1.4492753623188406	No Hit
CTTGGAGGGCCCCGGCAGCGC	1	1.4492753623188406	No Hit
ACTGGCGCGTCTGCAAC	1	1.4492753623188406	No Hit
CCGAAGAGGAGAAGACATCGCC	1	1.4492753623188406	No Hit
TATCCTCTGAAGACTC	1	1.4492753623188406	No Hit
GTGAGATCGAAATCCC	1	1.4492753623188406	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10	0.0	0.0	0.0	0.0	0.0
11	0.0	0.0	0.0	0.0	0.0
12	0.0	0.0	0.0	0.0	0.0
>>END_MODULE
