FastQCFastQC Report
Fri 14 Oct 2022
S1.Sobemovirus_segmet_2.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.Sobemovirus_segmet_2.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12140
Sequences flagged as poor quality0
Sequence length20-147
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCAAGAGAGTCGTTGGCACAGCATACA2892.3805601317957166No Hit
AGAGAGTCGTTGGCACAGCA2872.3640856672158153No Hit
AGAGAGTCGTTGGCACAGCATACA2702.224052718286656No Hit
CAAGAGAGTCGTTGGCACAGCATACA2381.9604612850082372No Hit
TTCAAGAGAGTCGTTGGCACAGCA2321.9110378912685337No Hit
CAAGAGAGTCGTTGGCACAGCA2201.8121911037891267No Hit
TTTCAAGAGAGTCGTTGGCACAGCA2181.7957166392092259No Hit
AAGAGAGTCGTTGGCACAGCATACA2121.7462932454695224No Hit
TTTCAAGAGAGTCGTTGGCACAGCATACA1981.6309719934102143No Hit
CAAGAGAGTCGTTGGCACAGC1841.5156507413509062No Hit
AAGAGAGTCGTTGGCACAGCA1691.3920922570016474No Hit
TTCAAGAGAGTCGTTGGCACAGC1691.3920922570016474No Hit
CCTTTCAAGAGAGTCGTTGGCACAGCA1481.2191103789126854No Hit
TTCAAGAGAGTCGTTGGCACA1441.186161449752883No Hit
CCTTTCAAGAGAGTCGTTGGCACAGCATACA1391.1449752883031301No Hit
TCAAGAGAGTCGTTGGCACAGCATACA1361.1202635914332784No Hit
GAGAGTCGTTGGCACAGCATACA1261.0378912685337727No Hit
CTTTCAAGAGAGTCGTTGGCACAGCA1251.029654036243822No Hit
AGAGAGTCGTTGGCACAGCATACAA1210.9967051070840197No Hit
AAGAGAGTCGTTGGCACAGC1180.971993410214168No Hit
AGAGAGTCGTTGGCACAGCATA1160.9555189456342669No Hit
CTTTCAAGAGAGTCGTTGGCACAGCATACA1150.9472817133443162No Hit
TCAAGAGAGTCGTTGGCACAGCA1090.8978583196046129No Hit
CCTTTCAAGAGAGTCGTTGGCACAGC1070.8813838550247116No Hit
TTTTCTGAAGGGGGTGTCTAAGGCCTTTCAAGAGAGTCGTTGGCACAGCA1050.8649093904448105No Hit
TTTCAAGAGAGTCGTTGGCACAGC1040.85667215815486No Hit
TTTCAAGAGAGTCGTTGGCACAGCATA1020.8401976935749588No Hit
CTCCCGTAGGAGTCTGACCTTGGTCACAGCATCGTGGCTGTACACGAGCC1000.8237232289950577No Hit
CAAGAGAGTCGTTGGCACAGCATA990.8154859967051071No Hit
CTTTCAAGAGAGTCGTTGGCACAGC970.7990115321252058No Hit
TTCAAGAGAGTCGTTGGCACAGCATACAA920.7578253706754531No Hit
TTTCAAGAGAGTCGTTGGCACA900.7413509060955519No Hit
TTCAAGAGAGTCGTTGGCACAGCATA840.6919275123558485No Hit
CTTTTCTGAAGGGGGTGTCTAAGGCCTTTCAAGAGAGTCGTTGGCACAGC820.6754530477759473No Hit
TCAAGAGAGTCGTTGGCACAGC760.6260296540362438No Hit
AAGAGAGTCGTTGGCACAGCATACAA730.601317957166392No Hit
TCAAGAGAGTCGTTGGCACA660.5436573311367381No Hit
CCTTTCAAGAGAGTCGTTGGCACA640.5271828665568369No Hit
CAAGAGAGTCGTTGGCACAGCATACAA610.5024711696869852No Hit
AAGAGAGTCGTTGGCACAGCATA580.47775947281713343No Hit
CTTTCAAGAGAGTCGTTGGCACA570.4695222405271829No Hit
TATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATC560.46128500823723234No Hit
TTCAAGAGAGTCGTTGGCACAGCATACAAA530.4365733113673806No Hit
TTCAAGAGAGTCGTTGGCACAGCATAAA530.4365733113673806No Hit
TCAAGAGAGTCGTTGGCACAGCATA520.42833607907743No Hit
AAGAGAGTCGTTGGCACAGCATAAA510.4200988467874794No Hit
TCAAGAGAGTCGTTGGCACAGCATACAA490.40362438220757824No Hit
CTTTTCTGAAGGGGGTGTCTAAGGCCTTTCAAGAGAGTCGTTGGCACAGCA490.40362438220757824No Hit
TTCAAGAGAGTCGTTGGCACAGCATAC480.3953871499176277No Hit
TTCAAGATCCGGCCTGAATCATTCCCTTTTCTGAAGGGGGTGTCGAAGGC460.37891268533772654No Hit
ATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATC440.3624382207578254No Hit
AAGGCCTTTCAAGAGAGTCGTTGGCACAGCA430.3542009884678748No Hit
CAAGAGAGTCGTTGGCACAGCATAAA410.33772652388797364No Hit
AGAAGATTGTATTCCGCGGCGC400.3294892915980231No Hit
AGAGAGTCGTTGGCACAGCATAAA400.3294892915980231No Hit
CAAGAGAGTCGTTGGCACAGCATAA390.3212520593080725No Hit
GGAGTCTGACCTTGGTCACAGCATCGTGGCTGTACACGAGCCAGCGTTTC380.3130148270181219No Hit
TTTCTGAAGGGGGTGTCGAAGGCCTTTCAAGAGAGTCGTTGGCACAGCA380.3130148270181219No Hit
TTCAAGAGAGTCGTTGGCAC370.30477759472817134No Hit
CTTGGTCACAGCATCGTGGCTGTACACGAGCCAGCGTTTCGTCAGCGTTA370.30477759472817134No Hit
AGTCTGACCTTGGTCACAGCATCGTGGCTGTACACGAGCCAGCGTTTCGT360.29654036243822074No Hit
TCTCCCGTAGGAGTCTGACCTTGGTCACAGCATCGTGGCTGTACACGAGC360.29654036243822074No Hit
GCCATGCCTAAGAGGAATAAGAATGTGGCGTCGGTGACAGTCGGCGCGCT350.2883031301482702No Hit
CCTTTCAAGAGAGTCGTTGGCAC350.2883031301482702No Hit
CCTTTCAAGAGAGTCGTTGGCACAGCATAAA350.2883031301482702No Hit
AGTCGGCGCGCTCGCCGAAGCTCTCGCGGCGCTGCCGGGGCCCTCCAAGG340.2800658978583196No Hit
TTTCAAGAGAGTCGTTGGCACAGCATACAAA340.2800658978583196No Hit
AGAGTCTTCAGAGGATATTTGAGCGGCGCGAAGCTTTTCCGCGCGGTATAAATTGTAAGTCGCCACCTTGCCCT330.27182866556836904No Hit
TATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATCC330.27182866556836904No Hit
AGAGAGTCGTTGGCACAGCATAA330.27182866556836904No Hit
TTTCAAGAGAGTCGTTGGCACAGCATAC320.26359143327841844No Hit
TGACCTTGGTCACAGCATCGTGGCTGTACACGAGCCAGCGTTTCGTCAGCGTTACAATGACGGCCT320.26359143327841844No Hit
TTCAAGAGAGTCGTTGGCACAGCATACAC320.26359143327841844No Hit
AGAGAGTCGTTGGCACAGCATTCA310.2553542009884679No Hit
AAGGCCTTTCAAGAGAGTCGTTGGCACAGC310.2553542009884679No Hit
TTCAAGAGAGTCGTTGGCACAGCATACACA300.2471169686985173No Hit
ATGAATCCGAGGGGGGGCCATATTAGGGTCGAAC300.2471169686985173No Hit
TTTCAAGAGAGTCGTTGGCACAGCATACAA290.23887973640856672No Hit
TGGCGTCGGTGACAGTCGGCGCGCTCGCCGAAGCTCTCGCGGCGCTGCCG290.23887973640856672No Hit
AAGAGAGTCGTTGGCACAGCATAA280.23064250411861617No Hit
TTCTCTTCCTATGAGTGGAGATTCCCCTTTTGCTTTTGGACAAACACTGCTGAAGAAGATTGTATTCCGCGGC270.22240527182866557No Hit
TATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGT270.22240527182866557No Hit
TATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGG270.22240527182866557No Hit
TTTTCAAGAGAGTCGTTGGCACAGC270.22240527182866557No Hit
TTTCAAGAGAGTCGTTGGCAC270.22240527182866557No Hit
CGCGGTGGTTGAGAAGCTATCGATTGGTTAGGGAGTTGACCTTGGTGCAG270.22240527182866557No Hit
AGAGAGTCGTTGGCACAGCATAC270.22240527182866557No Hit
CGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTAT260.214168039538715No Hit
TTCAAGAGAGTCGTTGGCACAGCATAA260.214168039538715No Hit
GCATCGTGGCTGTACACGAGCCAGCGTTTCGTCAGCGTTACAATGACGGCCTTTGCGAGGGACAGTGT260.214168039538715No Hit
GGCCTTTCAAGAGAGTCGTTGGCACAGCA260.214168039538715No Hit
GCATCGTGGCTGTACACGAGCCAGCGTTTCGTCAGCGTTACAATGACGGCCTTTGCGAGGGACAGTGTAAAAAA260.214168039538715No Hit
TCAAGAGAGTCGTTGGCACAGCATAAA250.20593080724876442No Hit
TTCAAGATCCGGCCTGAGTCATTCCCTTTTCTGAAGGGGGTGTCGAAGGCTTTTCAAGAGAGTCGTTGGCACAGC250.20593080724876442No Hit
TTCAAGAGAGTCGTTGGCACAGCATACATTTCTACTACAAGCCTGCAGTGGGTACCA250.20593080724876442No Hit
GCCTTTCAAGAGAGTCGTTGGCACAGCA250.20593080724876442No Hit
GAGGAATAAGAATGTGGCGTCGGTGACAGTCGGCGCGCTCGCCGAAGCTCTCGCGGCGCTGCCGGGGCCC250.20593080724876442No Hit
CAAGAGAGTCGTTGGCACAGCATAC250.20593080724876442No Hit
CTTTTCAAGAGAGTCGTTGGCACAGC250.20593080724876442No Hit
ATCGTGGCTGTACACGAGCCAGCGTTTCGTCAGCGTTACAATGACGGCCTTTGCGAGGGACAGTGTG240.19769357495881384No Hit
ATTTTCAAGATCCGGCCTGAGTCATTCCCTTTTCTGAAGGGGGTGTCGAA240.19769357495881384No Hit
CTGGAAACAGCGTTTGCTTTGTTCCGAGACTTACGGGTGCGATCGTCTGGGAGGGGGAAAAAGCC240.19769357495881384No Hit
ATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATCCTGATAAG240.19769357495881384No Hit
TTTCAAGAGAGTCGTTGGCACAGCATAAA230.18945634266886327No Hit
GTCTGACCTTGGTCACAGCATCGTGGCTGTACACGAGCCAGCGTTTCGTCAGCGTTACAATGACGGCCTTTGCGA230.18945634266886327No Hit
ATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATCCTGATAA230.18945634266886327No Hit
TTTCAAGAGAGTCGTTGGCACAGCATACGC230.18945634266886327No Hit
AACAGCGTTTGCTTTGTTCCGAGACTTACGGGTGCGATCGTCTGGGAGGGGGAAAAAGCC220.1812191103789127No Hit
TTCCTATGGTTGCCGAGGCCTACCCCTTTGTCTG220.1812191103789127No Hit
GGCCTTTCAAGAGAGTCGTTGGCACAGC220.1812191103789127No Hit
GGAGTCTGACCTTGGTCACAGCATCGTGGCTGTACACGAGCCAGCGTTTCGTCAGCGTTACAATGACGGCC220.1812191103789127No Hit
CCTTTCAAGAGAGTCGTTGGCACAG220.1812191103789127No Hit
TTTCAAGAGAGTCGTTGGCACAGCATACACA210.17298187808896212No Hit
TTTCTGAAGGGGGTGTCGAAGGCCTTTCAAGAGAGTCGTTGGCACAGCATACGCC210.17298187808896212No Hit
GAGAGTCGTTGGCACAGCATTCA210.17298187808896212No Hit
CTTTTCAAGAGAGTCGTTGGCACA210.17298187808896212No Hit
AGAGAGTCGTTGGCACAGCATACGC210.17298187808896212No Hit
ATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATCC210.17298187808896212No Hit
TTCAAGATCCGGCCTGAATCATTCCCTTTTCTGAAGGGGGTGTCGAAGGCTTTTCAAGAGAGTCGTTGGCACAGC200.16474464579901155No Hit
TCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGA200.16474464579901155No Hit
AGAGGATATTTGAGCGGCGCGAAGCTTTTCCGCGCGGTATAAATTGTAAGTCGCCAC200.16474464579901155No Hit
CTTTCAAGAGAGTCGTTGGCAC200.16474464579901155No Hit
TTGACGGGAGTCGTGTGATCAGATTCATGGGCTCTTTTACGGTCTCTTTTCGGATGA200.16474464579901155No Hit
CACCGGCGGTGACGCGGAAGAAGAGGAAGGCGCGCAAGAGGAAGAATGGGCCC190.15650741350906094No Hit
GAAGGCCTTTCAAGAGAGTCGTTGGCACAGCA190.15650741350906094No Hit
ATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATCCTGAT190.15650741350906094No Hit
CTTTCAAGAGAGTCGTTGGCACAGCATACAA190.15650741350906094No Hit
CGCTTGGGCGGATTCGCAGGGCAAGCCCTTGGTTTGTCCTAGGGAGAGGTTGCAG190.15650741350906094No Hit
GAGAGTCGTTGGCACAGCATAC190.15650741350906094No Hit
GAGAGTCGTTGGCACAGCATTCATTTCTACTACAAGCCTGCAGTGGGTACCA190.15650741350906094No Hit
GTACACGAGCCAGCGTTTCGTCAGCGTTACAATGACGGCCT190.15650741350906094No Hit
TTTCAAGAGAGTCGTTGGCACAGCATAA180.14827018121911037No Hit
AAGAGAGTCGTTGGCACAGCATAC180.14827018121911037No Hit
GAGGATATTTGAGCGGCGCGAAGCTTTTCCGCGCGGTATAAATTGTAAGTCGCCACC180.14827018121911037No Hit
CTGTACACGAGCCAGCGTTTCGTCAGCGTTACAATGACGGCCTTTGCGAGGGACAGTGT180.14827018121911037No Hit
AGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGAT180.14827018121911037No Hit
GCCTTTCAAGAGAGTCGTTGGCACAGC180.14827018121911037No Hit
GAGAGTCGTTGGCACAGCATAA180.14827018121911037No Hit
CAAGAGAGTCGTTGGCACAGCATTCA180.14827018121911037No Hit
TGCTTTGTTCCGAGACTTACGGGTGCGATCGTCTGGGAGGGGGAAACGCCGG180.14827018121911037No Hit
TGGCGTCGGTGACAGTCGGCGCGCTCGCCGAAGCTCTCGCGGCGCTGCCGGGGCC170.1400329489291598No Hit
TGACTGGGATTTCGATCTCACAGACACCGCTGAGCGATCGTCTGTGGCCGC170.1400329489291598No Hit
ACGCGGTGGTTGAGAAGCTATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGA170.1400329489291598No Hit
ATCGTGGCTGTACACGAGCCAGCGTTTCGTCAGCGTTACAATGACGGCCTTTGCGAGGGAC170.1400329489291598No Hit
GAAACAGCGTTTGCTTTGTTCCGAGACTTACGGGTGCGATCGTCTGGGAGGGGGAAGC170.1400329489291598No Hit
CTATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATCC170.1400329489291598No Hit
AAGAGAGTCGTTGGCACAGCAAACA170.1400329489291598No Hit
ATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTA160.13179571663920922No Hit
TTTCAAGAGAGTCGTTGGCACAGCATTCATTTCTACTACAAGCCTGCAGT160.13179571663920922No Hit
ATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGG160.13179571663920922No Hit
GTGGTTGAGAAGCTATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGG160.13179571663920922No Hit
TGGTGAACGATGTTTTCCCTGGAAACAGCGTTTGCTTTGTTCCGAGAC160.13179571663920922No Hit
AGAGAGTCGTTGGCACAGCATACAC160.13179571663920922No Hit
TATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGA160.13179571663920922No Hit
AGCTATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGAT160.13179571663920922No Hit
GAGAGTCGTTGGCACAGCATGC160.13179571663920922No Hit
CTGGAAACAGCGTTTGCTTTGTTCCGAGACTTACGGGTGCGATCGTCTGGGAGGGGG150.12355848434925865No Hit
CTTTTCAAGAGAGTCGTTGGCACAG150.12355848434925865No Hit
CACAGCATCGTGGCTGTACACGAGCCAGCGTTTCGTCAGCGTTACAATGA150.12355848434925865No Hit
GCGGTGGTTGAGAAGCTATCGATTGGTTAGGGAGTTGACCTTGGTGCAGC150.12355848434925865No Hit
TTCAAGAGAGTCGTTGGCACAGCATGC150.12355848434925865No Hit
TCAAGAGAGTCGTTGGCACAGCATTCA150.12355848434925865No Hit
TATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGAT150.12355848434925865No Hit
TCAAGAGAGTCGTTGGCACAGCATAC150.12355848434925865No Hit
TCAAGAGAGTCGTTGGCACAGCATTCATTTCTACTACAAGCCTGCAGTGGGTACCAC150.12355848434925865No Hit
GATGAATCCGAGGGGGGGCCATATTAGGGTCGAAC150.12355848434925865No Hit
TAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATCCTGATAAG150.12355848434925865No Hit
AAGAAGATTGTATTCCGCGGCGC150.12355848434925865No Hit
CCTTTCAAGAGAGTCGTTGGC150.12355848434925865No Hit
ATCGATTGGTTAGGGAGTTGACCTTGGTGCAGCA150.12355848434925865No Hit
ATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAG150.12355848434925865No Hit
AACAGCGTTTGCTTTGTTCCGAGACTTACGGGTGCGATCGTCTG150.12355848434925865No Hit
AAGAGAGTCGTTGGCACAGCATGC140.11532125205930809No Hit
TCAAGAGAGTCGTTGGCACAGCATACATTTCTACTACAAGCCTGCAGTGGGTACC140.11532125205930809No Hit
TTCAAGAGAGTCGTTGGCACAGCAT140.11532125205930809No Hit
TTCAAGAGAGTCGTTGGCACAGCATACGC140.11532125205930809No Hit
AGAGAGTCGTTGGCACAGCATACATTTCTACTACAAGCCTGCAGTGGGTACC140.11532125205930809No Hit
AGGGAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATCCTGATAAGG140.11532125205930809No Hit
TGACTGGGATTTCGATCTCACAGACACCGCTGAGCGATCGT140.11532125205930809No Hit
TTCAAGAGAGTCGTTGGCACAGCAAACA140.11532125205930809No Hit
GGTGAAAACCAATGGTCTCGTGTTTGACCCTCTGCCTGCT140.11532125205930809No Hit
TTTCTGAAGGGGGTGTCGAAGGCCTTTCAAGAGAGTCGTTGGCACA130.1070840197693575No Hit
AGAGGAAGAATGGGCCCGCGA130.1070840197693575No Hit
GGAAACAGCGTTTGCTTTGTTCCGAGACTTACGGGTGCGATCGTCTGGGAGGGGGAATTATTTA130.1070840197693575No Hit
CTTTTCTGAAGGGGGTGTCGAAGGCTTTTCAAGAGAGTCGTTGGCACAGCATACATT130.1070840197693575No Hit
CAAGAGAGTCGTTGGCACAGCATACAT130.1070840197693575No Hit
CAAGAGAGTCGTTGGCACAGCATACAC130.1070840197693575No Hit
GGCCTTTCAAGAGAGTCGTTGGCACA130.1070840197693575No Hit
TTCCCTGGAAACAGCGTTTGCTTTGTTCCGAGACTTACGGGTGCGATCGTCTGGAAA130.1070840197693575No Hit
TTTCAAGAGAGTCGTTGGCACAGCAAACA130.1070840197693575No Hit
CTTTTCAAGAGAGTCGTTGGCACAGCA130.1070840197693575No Hit
ATTCGCAGGGCAAGCCCTTGGTTTGTCCTAGGGAGAGGTTGCAGACGCGCC130.1070840197693575No Hit
GAGTTGACCTTGGTGCAGCAGGAGTTTATAGAGGATCCTG130.1070840197693575No Hit
AGGGGGTGTCGAAGGCCTTTCAAGAGAGTCGTTGGCACAGCATACA130.1070840197693575No Hit
TTGGGCGGATTCGCAGGGCAAGCCCTTGGTTTGTCCTAGGGAGAGGTTGCAGACGCGCC130.1070840197693575No Hit
CGTTTGCTTTGTTCCGAGACTTACGGGTGCGATCGTCTGGGAGGGG130.1070840197693575No Hit
TTTCAAGAGAGTCGTTGGCACAG130.1070840197693575No Hit
CGATTGGTTAGGGAGTTGACCTTGGTGCAGCAGGAG130.1070840197693575No Hit
TTTCAAGAGAGTCGTTGGCACAGCATACATTTCTACTACAAGCCTGCAGTGGGTACCAC130.1070840197693575No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)