FastQCFastQC Report
Fri 14 Oct 2022
S1.Sobemovirus_segmet_2.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.Sobemovirus_segmet_2.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47
Sequences flagged as poor quality0
Sequence length20-120
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCGAAATCGTGAACTCAGAA36.382978723404255No Hit
AGAGCCCATGAATCTGATCACCA24.25531914893617No Hit
CGAAAAGAGACCGTAAAAGAGC24.25531914893617No Hit
TCTTCCTCTTGCGCGCCTTCC24.25531914893617No Hit
GAAGACATCGCCCTCCACTCC24.25531914893617No Hit
CATTCTTCCTCTTGCGCGCCT24.25531914893617No Hit
ACCACTGGCGCGTCTGCAACC24.25531914893617No Hit
GAGCCCATGAATCTGATCACCA24.25531914893617No Hit
GAAAAGAGACCGTAAAAGAGC24.25531914893617No Hit
CCATTCTTCCTCTTGCGCGCC24.25531914893617No Hit
CAGGCAGAGGGTCAAACACGA24.25531914893617No Hit
AGAGCCCATGAATCTGATCACC12.127659574468085No Hit
AATATGGCCCCCCCTCGGATT12.127659574468085No Hit
CTCCCAGACGATCGCACCCG12.127659574468085No Hit
ATACCACTGGCGCGTCTGCAA12.127659574468085No Hit
GCGTCTGCAACCTCTCCCTACCA12.127659574468085No Hit
GCAGAGGGTCAAACACGAGAC12.127659574468085No Hit
TCTCAACCACCGCGTATCCAC12.127659574468085No Hit
CTATGAACTCCTGCTGCACCA12.127659574468085No Hit
GAGCCCATGAATCTGATCACACG12.127659574468085No Hit
AGAGCCCATGAATCTGATCACA12.127659574468085No Hit
CGGCGTTTCCCCCTCCCAGACC12.127659574468085No Hit
AAGAGACCGTAAAAGAGCCCA12.127659574468085No Hit
ATCGCGGGCCCATTCTTCCTC12.127659574468085No Hit
CGGCGTTTCCCCCTCCCAGAC12.127659574468085No Hit
TCGAAATCCCAGTCAACACCG12.127659574468085No Hit
GAGCCCATGAATCTGATCACC12.127659574468085No Hit
CCATTCTTCCTCTTGCGCGCCA12.127659574468085No Hit
AAGACATCGCCCTCCACTCC12.127659574468085No Hit
CTTGGAGGGCCCCGGCAGCGC12.127659574468085No Hit
ATGGCCCCCCCTCGGATTCAT12.127659574468085No Hit
GTTTGTCCAAAAGCAAAAGGGG12.127659574468085No Hit
CCTCACGCGAAACGGGGCCCATCGCGGGCCCATTCTTCCTCTTGCGCGCT12.127659574468085No Hit
CCGAAGAGGAGAAGACATCGCC12.127659574468085No Hit
ATCGCAAGGTTCCCCGGGCT12.127659574468085No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)