FastQCFastQC Report
Mon 28 Nov 2022
S1_Sudafrica.Tombus-like_2_monopartite.15-35nt.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1_Sudafrica.Tombus-like_2_monopartite.15-35nt.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478
Sequences flagged as poor quality0
Sequence length15-30
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGACAACCACTCACACCCG296.066945606694561No Hit
AAGACAACCACTCACACCCGG193.9748953974895396No Hit
CGCAGGATACTGAAGAAGCACCA112.301255230125523No Hit
AGATACGTGAGAGCATCATTCCCGAA91.882845188284519No Hit
CGGCGAGGTAATACTCAAGAAGAGGCAC81.6736401673640167No Hit
ACGACTCGACAACGACGGCACCA81.6736401673640167No Hit
TCGGCGAGGTAATACTCAAGAAGAGGCACA71.4644351464435146No Hit
CAACAACAACGCCGGGCCAGT71.4644351464435146No Hit
TACTGAAGAAGCACACTGGGAACCCA71.4644351464435146No Hit
ACACATAAACACAAAAGAACTGCTCCACGA71.4644351464435146No Hit
GCATGGCTATGAAGGAGCACCTCGAG71.4644351464435146No Hit
CATGGCTATGAAGGAGCACCTCGAGAAAC61.2552301255230125No Hit
CGGCGAGGTAATACTCAAGAAGAGGCACAC61.2552301255230125No Hit
TATGAGAACGCACGGAGAATC61.2552301255230125No Hit
TCGGCGAGGTAATACTCAAGAAGAGGCAC61.2552301255230125No Hit
ATGCAGGATCAAGGACATACTTGGCATGA51.0460251046025104No Hit
AGGATCAAGGACATACTTGGCATGACC51.0460251046025104No Hit
GTCTACAGGGACAAGCCCAAACTCGC51.0460251046025104No Hit
GAGATCGGCGAGAAATTATGGCAAAAGG51.0460251046025104No Hit
GCATGGCTATGAAGGAGCACCTCGAGAAAC51.0460251046025104No Hit
TATCGCCGCAGGATACTGAAGAAGCACACG40.8368200836820083No Hit
CTATGAGAACGCACGGAGAATCATCA40.8368200836820083No Hit
TGGCTCAGGGAGACTACGGAC40.8368200836820083No Hit
AGGACCAATGCCTCGTGGACGCGCTCGAG40.8368200836820083No Hit
CACATCAATAGAGCACCCTACAGCAAACA40.8368200836820083No Hit
TTCCCGAATGACAAATACCTC40.8368200836820083No Hit
AGGTAATACTCAAGAAGAGGCACACAGGC40.8368200836820083No Hit
TTCGGCGAGGTAATACTCAAGAAGAGGCAC40.8368200836820083No Hit
TGACCACTCTGCGTTCGATGCCCA40.8368200836820083No Hit
CTAAGACCGAAAAAATGAGTGCCACCCA40.8368200836820083No Hit
GGATATCGCCGCAGGATACTGAAGAAGC40.8368200836820083No Hit
ATCGGCGAGAAATTATGGCAA30.6276150627615062No Hit
CGCCGCAGGATACTGAAGAAGCAC30.6276150627615062No Hit
ACGCAAGTAGAATCCGTCCACC30.6276150627615062No Hit
AATTTCGGCGAGGTAATAC30.6276150627615062No Hit
CTGGCCTGGATGAAACGC30.6276150627615062No Hit
TCGGCGAGAAATTATGGCAAA30.6276150627615062No Hit
CTCCTGGCCTGGATGAAACGC30.6276150627615062No Hit
TGGACTGAGATCGGCGAGAAATTATGGCA30.6276150627615062No Hit
CGCATGGCTATGAAGGAGCACCTCG30.6276150627615062No Hit
TACTGGACGGAGATCGGCGAGAAATTAT30.6276150627615062No Hit
AATGCCTCGTGGACGCGCTCGAG30.6276150627615062No Hit
TCAGGAGGCTGAGGAGATA30.6276150627615062No Hit
AGGAGGCTGAGGAGATATCGGA30.6276150627615062No Hit
AGACAACCACTCACACCCGGCCA30.6276150627615062No Hit
TCAAGACAACCACTCACACCC30.6276150627615062No Hit
ATGAGAACGCACGGAGAATCA30.6276150627615062No Hit
GTGATCTCTATGAGAACGCACGG30.6276150627615062No Hit
CATCCCCAACCGAGGCAACCA30.6276150627615062No Hit
TCAGAGCCATGCCCC30.6276150627615062No Hit
TGGACGCGCTCGAGGAGACTA20.41841004184100417No Hit
TACTAAACGCGTCAAACCC20.41841004184100417No Hit
AGACAACCACTCACACCCGGC20.41841004184100417No Hit
CGCAAGTAGAATCCGTCCAGC20.41841004184100417No Hit
TATGGATCAGTGTTACCTACCCGC20.41841004184100417No Hit
CTCAAGACAACCACTCACACCCGGCACA20.41841004184100417No Hit
ATATCGCCGCAGGATACTGA20.41841004184100417No Hit
TGGACTGAGATCGGCG20.41841004184100417No Hit
GAGAAATTATGGCAAAAG20.41841004184100417No Hit
GAAGATGCCCCCGCCCGGAACA20.41841004184100417No Hit
CACGCAAGTAGAATCCGTCCAC20.41841004184100417No Hit
CAACGCCGGGCCAGTCACATCGAGAAACT20.41841004184100417No Hit
GAGGCTGAGGAGATATCGGAA20.41841004184100417No Hit
CAAGGACATACTTGGCATGAC20.41841004184100417No Hit
AGCCCACAATCCTAGA20.41841004184100417No Hit
TGCACAGATATGGATCAGT20.41841004184100417No Hit
ACACATCAATAGAGCACCCT20.41841004184100417No Hit
CCAACAAATAGGAGATCGTCGTCAAC20.41841004184100417No Hit
AGGACAACCACTCACACCCGG20.41841004184100417No Hit
TATGAAGGAGCACCTCGAGAA20.41841004184100417No Hit
CAAGACAACCACTCACACCC20.41841004184100417No Hit
CTTCAGGAGGCTGAGGAGATAT20.41841004184100417No Hit
ATTTCGGCGAGGTAATACT20.41841004184100417No Hit
TGAAGGAGCACCTCGAGAAAC20.41841004184100417No Hit
CGGCATGCCAATGTCTGTCCTTGAC20.41841004184100417No Hit
AGACCGAAAAAATGAGTGCCAC20.41841004184100417No Hit
TCCAAGTCGAATACACACCGA20.41841004184100417No Hit
AATACGACTCGACAACGACGGCACC20.41841004184100417No Hit
GGGAGACTACGGACCACATACT20.41841004184100417No Hit
ACTGAAGAAGCACACTGGGAA20.41841004184100417No Hit
GTGGACGCGCTCGAGGAGACT20.41841004184100417No Hit
TGGACTGAGATCGGCGAGAAA20.41841004184100417No Hit
ACTCAAGACAACCACTCACACCCG20.41841004184100417No Hit
CGTCACAGTCGAGGCTCTCAGT20.41841004184100417No Hit
AAGTAGACACCATCACTGAGGACATAC20.41841004184100417No Hit
GACACCATCACTGAGGACATAC20.41841004184100417No Hit
CCGAAAAAATGAGTGCCACCAAATAC20.41841004184100417No Hit
TGTGTGCACCTTCGCTAAGAC20.41841004184100417No Hit
AGGAGGCTGAGGAGATA20.41841004184100417No Hit
CAGGATACTGAAGAAGCACAC10.20920502092050208No Hit
CACATAAACACAAAAGAACTGCTCCACGA10.20920502092050208No Hit
CAATCTTCTCCTGCAAGCAGCCAAAAAA10.20920502092050208No Hit
GTGTGCACCTTCGCTAAGAC10.20920502092050208No Hit
ACCATGGGCCGTCAGTTTGA10.20920502092050208No Hit
TCGGCGAGAAATTATGGCAAAA10.20920502092050208No Hit
CGCAGGATACTGAAGAAGCACC10.20920502092050208No Hit
AGCAAGTAGAATCCGTCCAGC10.20920502092050208No Hit
GCGATAGCAGGCACTG10.20920502092050208No Hit
CACATATTATGCACAGACCCC10.20920502092050208No Hit
GCAAGTAGAATCCGTCCAGCCA10.20920502092050208No Hit
TACTGGACTGAGATCGGCG10.20920502092050208No Hit
CACTCACACCCGGCACAACCA10.20920502092050208No Hit
CACAACGGTTCTCCCACCCACCA10.20920502092050208No Hit
GTAATACTCAAGAAGAGGCACCAA10.20920502092050208No Hit
TCAATAGAGCACCCTACAGCA10.20920502092050208No Hit
GAGATCGTCGTCAAC10.20920502092050208No Hit
CAAGACAACCACTCACACCCGA10.20920502092050208No Hit
GTAGACACCATCACTGAGGACC10.20920502092050208No Hit
CTGGACTGAGATCGGCGAGAA10.20920502092050208No Hit
CAAGACAACCACTCACACCCGG10.20920502092050208No Hit
CTACAGGGACAAGCCCAAACTCGC10.20920502092050208No Hit
CCAAATACAAGGCACCACGGT10.20920502092050208No Hit
GAGCCCCTGATAGTCAAC10.20920502092050208No Hit
TCCAAGTCGAATACACACCG10.20920502092050208No Hit
AAGGACATACTTGGCATGA10.20920502092050208No Hit
CACGGAGAGCCCCTGATAGTC10.20920502092050208No Hit
CGGTTAATAGCAGCCCGCAATCCATACTTT10.20920502092050208No Hit
CTATGCACCATTCTTCTCCTG10.20920502092050208No Hit
AAGGACACTGGCTCAGGGAGACTA10.20920502092050208No Hit
CAATTTCGGATATTGTAGTATGGCTGACGC10.20920502092050208No Hit
AAGACCGAAAAAATGAGTGCC10.20920502092050208No Hit
ACTGGACTGAGATCGGCG10.20920502092050208No Hit
TGGCTATGAAGGAGCACCTCGAGAAAC10.20920502092050208No Hit
TGCACAGACCCCACACACCAT10.20920502092050208No Hit
AAACGCGTCAAACCCACCCGA10.20920502092050208No Hit
TGGATCAGTGTTACCTACCCGCAAT10.20920502092050208No Hit
AGAATAGGATATCGCCGCAGG10.20920502092050208No Hit
TCTATGAGAACGCACGGAGAA10.20920502092050208No Hit
GCAGGATACTGAAGAA10.20920502092050208No Hit
AGGTAATACTCAAGAAGAGGCAC10.20920502092050208No Hit
CGATCCCATAGTCTAC10.20920502092050208No Hit
ATATTGTAGTATGGCTGACGA10.20920502092050208No Hit
CACATCCCCAACCGAGGCAAC10.20920502092050208No Hit
AGACAACCACTCACACCCGGCC10.20920502092050208No Hit
AGACAACCACTCACACCCGGCA10.20920502092050208No Hit
CGGCGAGAAATTATGGCAAACCA10.20920502092050208No Hit
GAGATCGGCGAGAAATTATGGCAAAAG10.20920502092050208No Hit
ACAACCTACGTCACATC10.20920502092050208No Hit
CGCAATCGCAGGATCATACAT10.20920502092050208No Hit
GCAGGATACTGAAGAAGCAC10.20920502092050208No Hit
TACTGGACTGAGATCGGCGAGAAATTAT10.20920502092050208No Hit
GATATCGCCGCAGGATACTGAAGAAGC10.20920502092050208No Hit
ACCGCTACATCCTGGACTCTGTGTTGT10.20920502092050208No Hit
ATCGGCGAGAAATTATGGCACC10.20920502092050208No Hit
AAGGCACTGTCAACTCAGGAG10.20920502092050208No Hit
CGAAAAAATGAGTGCCACCAAATAC10.20920502092050208No Hit
AACGAGTGCATCTTCAGGAGG10.20920502092050208No Hit
CTATTGCCTTGACCACTCTGCGTTCGA10.20920502092050208No Hit
ATCCCCAACCGAGGCAACCA10.20920502092050208No Hit
ATGGCTTGGACGACACA10.20920502092050208No Hit
CGTGGACGCGCTCGAGGAGAC10.20920502092050208No Hit
ATACTAAACGCGTCAAACCC10.20920502092050208No Hit
TCATACAAAGGCACTGTCAAC10.20920502092050208No Hit
AACTCAAGACAACCACTC10.20920502092050208No Hit
CCATCACTGAGGACATAC10.20920502092050208No Hit
ACTCAAGACAACCACTCACACCCGGCACA10.20920502092050208No Hit
ACGCCGGGCCAGTCACATCG10.20920502092050208No Hit
TTCAGGAGGCTGAGGAGATA10.20920502092050208No Hit
TGAGATCGGCGAGAAATTA10.20920502092050208No Hit
CATACAACCCTACTCTGGTAGCAAA10.20920502092050208No Hit
GAGCCCCTGATAGTCAACAT10.20920502092050208No Hit
TGGGTCGCGAGAATAGACACT10.20920502092050208No Hit
GGACTGAGATCGGCGAGAAATTATGGCAAA10.20920502092050208No Hit
CCAACAAATATGAGATCGTCGTCAAC10.20920502092050208No Hit
TCCAAGTCGAATACACACCGAA10.20920502092050208No Hit
AGGAGCACCTCGAGAAAC10.20920502092050208No Hit
GATATTGTAGTATGGCTGACGA10.20920502092050208No Hit
AGGACACTGGCTCAGGGAGACTAC10.20920502092050208No Hit
GCAAGTAGAATCCGTCCAGCG10.20920502092050208No Hit
ACAACAACGCCGGGCCAGTCA10.20920502092050208No Hit
AGATCGGCGAGAAATTATGGCAAAAGG10.20920502092050208No Hit
CAGTCGAGGCTCTCAGATATTTC10.20920502092050208No Hit
ACAACGCCGGGCCAGT10.20920502092050208No Hit
AGGACACTGGCTCAGGGAGACC10.20920502092050208No Hit
TCACTGAGGACATACATGAAG10.20920502092050208No Hit
CGGCGAGAAATTATGGCA10.20920502092050208No Hit
CACATGACGACACAACC10.20920502092050208No Hit
GGATACAGAGGAGGTAGTTGC10.20920502092050208No Hit
ATCGCCGCAGGATACTGAAGAA10.20920502092050208No Hit
TATTGTAGTATGGCTGACGAAGATGC10.20920502092050208No Hit
CTATTGCCTTGACCACTCTGCG10.20920502092050208No Hit
ACGAAAGTAGACACCATCACTGAGGACATA10.20920502092050208No Hit
ATGGCTATGAAGGAGCACCTCGAGAA10.20920502092050208No Hit
CGAAAGTAGACACCATCAC10.20920502092050208No Hit
AGAGGAGGTAGTTGCATAACACAGCACC10.20920502092050208No Hit
AAACGAGTGCATCTTCAGGAG10.20920502092050208No Hit
CAGTGTTACCTACCCGCAATC10.20920502092050208No Hit
CTATGAGAACGCACGGAGAATCAT10.20920502092050208No Hit
CGCCCGGAACAGAATAGGATA10.20920502092050208No Hit
AATCACAACGGTTCTCCCACCC10.20920502092050208No Hit
AGGCTGAGGAGATATCGGAA10.20920502092050208No Hit
AAGAAGCACACTGGGAACCTC10.20920502092050208No Hit
AAGACCGAAAAAATGAGTGCCACC10.20920502092050208No Hit
GAAGAGTACCTCCAACAGCTC10.20920502092050208No Hit
ACACCATCACTGAGGAC10.20920502092050208No Hit
CTGAAGAAGCACACTGGGAACCCA10.20920502092050208No Hit
GGGTCGCGAGAATAGACACT10.20920502092050208No Hit
CCAATGTCTGTCCTTGACCCA10.20920502092050208No Hit
AAGCCCACAATCCTAGA10.20920502092050208No Hit
CGCGTCAAACCCACCCGA10.20920502092050208No Hit
CAAGGCACCACGGTTAATAGC10.20920502092050208No Hit
CTGGACTGAGATCGGCGAGAAATTATGGC10.20920502092050208No Hit
CACGCAAGTAGAATCCGTCCAGCG10.20920502092050208No Hit
TATGAGATCGTCGTCAACGGG10.20920502092050208No Hit
CAGGACAGAATGCAATTTCGGCGAGGTA10.20920502092050208No Hit
AACAACGCCGGGCCAGTCACATCG10.20920502092050208No Hit
CGACTCGACAACGACGGCAT10.20920502092050208No Hit
AGGCTGAGGAGATATCGGAAGAA10.20920502092050208No Hit
CGCTACATCCTGGACTCTGT10.20920502092050208No Hit
CACAACTCAAGACAACCACTC10.20920502092050208No Hit
CGTCACAGTCGAGGCTCTCA10.20920502092050208No Hit
CGCATGGGTCGCGAGAATAGAA10.20920502092050208No Hit
GCATGGCTATGAAGGAGCACCTCGA10.20920502092050208No Hit
ATCCAAGTCGAATACACACCG10.20920502092050208No Hit
ACAAAGGCACTGTCAAC10.20920502092050208No Hit
TGGACTGAGATCGGCGAGAAATTATGGC10.20920502092050208No Hit
CAACTCAAGACAACCACT10.20920502092050208No Hit
GATCGGCGAGAAATTATGGCA10.20920502092050208No Hit
CAACGACGGCATGCCA10.20920502092050208No Hit
CATGAAGAATGAAGCCAATGCC10.20920502092050208No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)