FastQCFastQC Report
Mon 28 Nov 2022
S1_Sudafrica.Tombus-like_2_monopartite.15-35nt.new.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1_Sudafrica.Tombus-like_2_monopartite.15-35nt.new.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences739
Sequences flagged as poor quality0
Sequence length20-35
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGACAACCACTCACACCCG283.7889039242219216No Hit
TTTCGGCGAGGTAATACTCAAGAAGAGGCACACA243.247631935047361No Hit
TCGGCGAGGTAATACTCAAGAAGAGGCACACA243.247631935047361No Hit
AAGACAACCACTCACACCCGG192.571041948579161No Hit
TTCGGCGAGGTAATACTCAAGAAGAGGCACA162.165087956698241No Hit
TTCGGCGAGGTAATACTCAAGAAGAGGCACACA121.6238159675236805No Hit
CGGCGAGGTAATACTCAAGAAGAGGCACACAGGC121.6238159675236805No Hit
CGCAGGATACTGAAGAAGCACCA111.4884979702300407No Hit
ATTTCGGCGAGGTAATACTCAAGAAGAGGCACACA101.3531799729364005No Hit
CACAGAAAACAGAAACACTACACATCAATAGAGCA91.2178619756427604No Hit
AGATACGTGAGAGCATCATTCCCGAA91.2178619756427604No Hit
CATCAATAGAGCACCCTACAGCAAACAATACACG91.2178619756427604No Hit
ACAATTTCGGATATTGTAGTATGGCTGACGC91.2178619756427604No Hit
AATTTCGGCGAGGTAATACTCAAGAAGAGGCACAC81.0825439783491204No Hit
ATACTGGACTGAGATCGGCGAGAAATTATGGC81.0825439783491204No Hit
CGGCGAGGTAATACTCAAGAAGAGGCAC81.0825439783491204No Hit
ACGACTCGACAACGACGGCACCA81.0825439783491204No Hit
CTCAAGACAACCACTCACACCCGGCACAACCA81.0825439783491204No Hit
TATTGTAGTATGGCTGACGAAGATGCCCCCGCC81.0825439783491204No Hit
TCGGCGAGGTAATACTCAAGAAGAGGCACA70.9472259810554804No Hit
TCAAGCGATCGAAGACGCAGTCCCACTACTCAG70.9472259810554804No Hit
CAACAACAACGCCGGGCCAGT70.9472259810554804No Hit
ATCATCAAGAAATCACAACGGTTCTCCCACCC70.9472259810554804No Hit
CGGCGAGGTAATACTCAAGAAGAGGCACACA70.9472259810554804No Hit
TACTGAAGAAGCACACTGGGAACCCA70.9472259810554804No Hit
ATGAGAACGCACGGAGAATCATCAAGAAATC70.9472259810554804No Hit
ACACATAAACACAAAAGAACTGCTCCACGA70.9472259810554804No Hit
GCATGGCTATGAAGGAGCACCTCGAG70.9472259810554804No Hit
GTGCATCTTCAGGAGGCTGAGGAGATATCGGAAGA60.8119079837618403No Hit
CATGGCTATGAAGGAGCACCTCGAGAAAC60.8119079837618403No Hit
CGGCGAGGTAATACTCAAGAAGAGGCACAC60.8119079837618403No Hit
ATTTCGGCGAGGTAATACTCAAGAAGAGGCACAC60.8119079837618403No Hit
TCGGCGAGGTAATACTCAAGAAGAGGCACAC60.8119079837618403No Hit
AGGATCAAGGACATACTTGGCATGACCTATAAAA60.8119079837618403No Hit
AATTTCGGCGAGGTAATACTCAAGAAGAGGCAC60.8119079837618403No Hit
TATGAGAACGCACGGAGAATC60.8119079837618403No Hit
ACTCAAGACAACCACTCACACCCGGCACAACC60.8119079837618403No Hit
ACTGGACGGAGATCGGCGAGAAATTATGGCAAAA50.6765899864682002No Hit
ACGGTTAATAGCAGCCCGCAATCCATACTTT50.6765899864682002No Hit
TTTCGGCGAGGTAATACTCAAGAAGAGGCACACAG50.6765899864682002No Hit
ATGCAGGATCAAGGACATACTTGGCATGA50.6765899864682002No Hit
AGGATCAAGGACATACTTGGCATGACC50.6765899864682002No Hit
GTCTACAGGGACAAGCCCAAACTCGC50.6765899864682002No Hit
GAGATCGGCGAGAAATTATGGCAAAAGG50.6765899864682002No Hit
GCATGGCTATGAAGGAGCACCTCGAGAAAC50.6765899864682002No Hit
CAATTTCGGCGAGGTAATACTCAAGAAGAGGCACA50.6765899864682002No Hit
AAGGCACTGTCAACTCAGGAGACATCACCACC50.6765899864682002No Hit
TCGGCGAGGTAATACTCAAGAAGAGGCAC50.6765899864682002No Hit
ACTCAGGACAGAATGCAATTTCGGCGAGGTAA50.6765899864682002No Hit
TATCGCCGCAGGATACTGAAGAAGCACACG40.5412719891745602No Hit
CTATGAGAACGCACGGAGAATCATCA40.5412719891745602No Hit
TGGCTCAGGGAGACTACGGAC40.5412719891745602No Hit
AGGACCAATGCCTCGTGGACGCGCTCGAG40.5412719891745602No Hit
CACATCAATAGAGCACCCTACAGCAAACA40.5412719891745602No Hit
TTCCCGAATGACAAATACCTC40.5412719891745602No Hit
AGGTAATACTCAAGAAGAGGCACACAGGC40.5412719891745602No Hit
TTCGGCGAGGTAATACTCAAGAAGAGGCAC40.5412719891745602No Hit
ATTTCGGCGAGGTAATACTCAAGAAGAGGCACA40.5412719891745602No Hit
TGACCACTCTGCGTTCGATGCCCA40.5412719891745602No Hit
CCATGCAGGATCAAGGACATACTTGGCATGACCT40.5412719891745602No Hit
AGGCTAGTATTCGGATACTGGACGGAGATCGGCG40.5412719891745602No Hit
CTAAGACCGAAAAAATGAGTGCCACCCA40.5412719891745602No Hit
GTAGTATGGCTGACGAAGATGCCCCCGCCCGGAA40.5412719891745602No Hit
GGATATCGCCGCAGGATACTGAAGAAGC40.5412719891745602No Hit
ATCGGCGAGAAATTATGGCAA30.40595399188092013No Hit
GACGAAAGTAGACACCATCACTGAGGACATA30.40595399188092013No Hit
CGCTAAGACCGAAAAAATGAGTGCCACCAAATACA30.40595399188092013No Hit
CGCCGCAGGATACTGAAGAAGCAC30.40595399188092013No Hit
ACGCAAGTAGAATCCGTCCACC30.40595399188092013No Hit
TCGGCGAGAAATTATGGCAAA30.40595399188092013No Hit
CTCCTGGCCTGGATGAAACGC30.40595399188092013No Hit
ACTGGACTGAGATCGGCGAGAAATTATGGCAAAA30.40595399188092013No Hit
TGGACTGAGATCGGCGAGAAATTATGGCA30.40595399188092013No Hit
CGCATGGCTATGAAGGAGCACCTCG30.40595399188092013No Hit
TACTGGACGGAGATCGGCGAGAAATTAT30.40595399188092013No Hit
AATGCCTCGTGGACGCGCTCGAG30.40595399188092013No Hit
CACGTCACAGTCGAGGCTCTCAGATATTTCCA30.40595399188092013No Hit
ATTTCGGCGAGGTAATACTCAAGAAGAGGCAC30.40595399188092013No Hit
AGGAGGCTGAGGAGATATCGGA30.40595399188092013No Hit
AGACAACCACTCACACCCGGCCA30.40595399188092013No Hit
TCAAGACAACCACTCACACCC30.40595399188092013No Hit
TCGGATACTGGACGGAGATCGGCGAGAAATTAT30.40595399188092013No Hit
ATGAGAACGCACGGAGAATCA30.40595399188092013No Hit
GTGATCTCTATGAGAACGCACGG30.40595399188092013No Hit
ACGTCACAGTCGAGGCTCTCAGATATTTCCAT30.40595399188092013No Hit
CATCCCCAACCGAGGCAACCA30.40595399188092013No Hit
TGGACGCGCTCGAGGAGACTA20.2706359945872801No Hit
CCATGCAGGATCAAGGACATACTTGGCATGACC20.2706359945872801No Hit
AGACAACCACTCACACCCGGC20.2706359945872801No Hit
CGCAAGTAGAATCCGTCCAGC20.2706359945872801No Hit
TATGGATCAGTGTTACCTACCCGC20.2706359945872801No Hit
CTCAAGACAACCACTCACACCCGGCACA20.2706359945872801No Hit
ATATCGCCGCAGGATACTGA20.2706359945872801No Hit
GAAGATGCCCCCGCCCGGAACA20.2706359945872801No Hit
CACGCAAGTAGAATCCGTCCAC20.2706359945872801No Hit
CAACGCCGGGCCAGTCACATCGAGAAACT20.2706359945872801No Hit
GAGGCTGAGGAGATATCGGAA20.2706359945872801No Hit
CAAGGACATACTTGGCATGAC20.2706359945872801No Hit
ACACATCAATAGAGCACCCT20.2706359945872801No Hit
CCAACAAATAGGAGATCGTCGTCAAC20.2706359945872801No Hit
AGGACAACCACTCACACCCGG20.2706359945872801No Hit
TATGAAGGAGCACCTCGAGAA20.2706359945872801No Hit
CAAGACAACCACTCACACCC20.2706359945872801No Hit
CTTCAGGAGGCTGAGGAGATAT20.2706359945872801No Hit
TGAAGGAGCACCTCGAGAAAC20.2706359945872801No Hit
CGGCATGCCAATGTCTGTCCTTGAC20.2706359945872801No Hit
AGACCGAAAAAATGAGTGCCAC20.2706359945872801No Hit
TCCAAGTCGAATACACACCGA20.2706359945872801No Hit
AATACGACTCGACAACGACGGCACC20.2706359945872801No Hit
GGGAGACTACGGACCACATACT20.2706359945872801No Hit
ACTGAAGAAGCACACTGGGAA20.2706359945872801No Hit
TTCGGCGAGGTAATACTCAAGAAGAGGCACAC20.2706359945872801No Hit
GTGGACGCGCTCGAGGAGACT20.2706359945872801No Hit
ACTGGACTGAGATCGGCGAGAAATTATGGCA20.2706359945872801No Hit
TGGACTGAGATCGGCGAGAAA20.2706359945872801No Hit
ACTCAAGACAACCACTCACACCCG20.2706359945872801No Hit
CGTCACAGTCGAGGCTCTCAGT20.2706359945872801No Hit
AAGTAGACACCATCACTGAGGACATAC20.2706359945872801No Hit
TCGGATACTGGACTGAGATCGGCGAGAAATTAT20.2706359945872801No Hit
GACACCATCACTGAGGACATAC20.2706359945872801No Hit
CCGAAAAAATGAGTGCCACCAAATAC20.2706359945872801No Hit
TGTGTGCACCTTCGCTAAGAC20.2706359945872801No Hit
CAGGATACTGAAGAAGCACAC10.13531799729364005No Hit
CACATAAACACAAAAGAACTGCTCCACGA10.13531799729364005No Hit
CAATCTTCTCCTGCAAGCAGCCAAAAAA10.13531799729364005No Hit
GTGTGCACCTTCGCTAAGAC10.13531799729364005No Hit
ACCATGGGCCGTCAGTTTGA10.13531799729364005No Hit
TCGGCGAGAAATTATGGCAAAA10.13531799729364005No Hit
CGCAGGATACTGAAGAAGCACC10.13531799729364005No Hit
AGCAAGTAGAATCCGTCCAGC10.13531799729364005No Hit
CACATATTATGCACAGACCCC10.13531799729364005No Hit
GCAAGTAGAATCCGTCCAGCCA10.13531799729364005No Hit
CACTCACACCCGGCACAACCA10.13531799729364005No Hit
GCGCTCAAAGACAGCACACATCACCCTACAGG10.13531799729364005No Hit
CACAACGGTTCTCCCACCCACCA10.13531799729364005No Hit
GTAATACTCAAGAAGAGGCACCAA10.13531799729364005No Hit
TCAATAGAGCACCCTACAGCA10.13531799729364005No Hit
CAAGACAACCACTCACACCCGA10.13531799729364005No Hit
GTAGACACCATCACTGAGGACC10.13531799729364005No Hit
CTGGACTGAGATCGGCGAGAA10.13531799729364005No Hit
AAGCATGTGATCTCTATGAGAACGCACGGAGAATC10.13531799729364005No Hit
CTACAGGGACAAGCCCAAACTCGC10.13531799729364005No Hit
CCAAATACAAGGCACCACGGT10.13531799729364005No Hit
ACAAGCCCAAACTCGCATGGGTCGCGAGAATAGAC10.13531799729364005No Hit
CATCAATAGAGCACCCTACAGCAAACAATACAC10.13531799729364005No Hit
TCCAAGTCGAATACACACCG10.13531799729364005No Hit
CACGGAGAGCCCCTGATAGTC10.13531799729364005No Hit
CGGTTAATAGCAGCCCGCAATCCATACTTT10.13531799729364005No Hit
CTATGCACCATTCTTCTCCTG10.13531799729364005No Hit
AAGGACACTGGCTCAGGGAGACTA10.13531799729364005No Hit
CAATTTCGGATATTGTAGTATGGCTGACGC10.13531799729364005No Hit
AAGACCGAAAAAATGAGTGCC10.13531799729364005No Hit
GTCAACTCAGGAGACATCACCACCTCATTTGGCAA10.13531799729364005No Hit
ATTGTAGTATGGCTGACGAAGATGCCCCCGCC10.13531799729364005No Hit
TGGCTATGAAGGAGCACCTCGAGAAAC10.13531799729364005No Hit
TGCACAGACCCCACACACCAT10.13531799729364005No Hit
TATTGTAGTATTGCTGACGAAGATGCCCCCGCC10.13531799729364005No Hit
AAACGCGTCAAACCCACCCGA10.13531799729364005No Hit
TGGATCAGTGTTACCTACCCGCAAT10.13531799729364005No Hit
AGAATAGGATATCGCCGCAGG10.13531799729364005No Hit
TCTATGAGAACGCACGGAGAA10.13531799729364005No Hit
AGGTAATACTCAAGAAGAGGCAC10.13531799729364005No Hit
ATATTGTAGTATGGCTGACGA10.13531799729364005No Hit
CACATCCCCAACCGAGGCAAC10.13531799729364005No Hit
AGACAACCACTCACACCCGGCC10.13531799729364005No Hit
AGACAACCACTCACACCCGGCA10.13531799729364005No Hit
CGGCGAGAAATTATGGCAAACCA10.13531799729364005No Hit
GAGATCGGCGAGAAATTATGGCAAAAG10.13531799729364005No Hit
CGCAATCGCAGGATCATACAT10.13531799729364005No Hit
GCAGGATACTGAAGAAGCAC10.13531799729364005No Hit
TACTGGACTGAGATCGGCGAGAAATTAT10.13531799729364005No Hit
GATATCGCCGCAGGATACTGAAGAAGC10.13531799729364005No Hit
ACCGCTACATCCTGGACTCTGTGTTGT10.13531799729364005No Hit
ATCGGCGAGAAATTATGGCACC10.13531799729364005No Hit
AAGGCACTGTCAACTCAGGAG10.13531799729364005No Hit
AACGAGTGCATCTTCAGGAGG10.13531799729364005No Hit
TTTCGGCGAGGTAATACTCAAGAAGAGGCACA10.13531799729364005No Hit
CTATTGCCTTGACCACTCTGCGTTCGA10.13531799729364005No Hit
ATCCCCAACCGAGGCAACCA10.13531799729364005No Hit
CGTGGACGCGCTCGAGGAGAC10.13531799729364005No Hit
ATACTAAACGCGTCAAACCC10.13531799729364005No Hit
TCATACAAAGGCACTGTCAAC10.13531799729364005No Hit
CAAGCCCAAACTCGCATGGGTCGCGAGAATAGAC10.13531799729364005No Hit
AATTTCGGCGAGGTAATACTCAAGAAGAGGCA10.13531799729364005No Hit
ACTCAAGACAACCACTCACACCCGGCACA10.13531799729364005No Hit
ACGCCGGGCCAGTCACATCG10.13531799729364005No Hit
TTCAGGAGGCTGAGGAGATA10.13531799729364005No Hit
CATACAACCCTACTCTGGTAGCAAA10.13531799729364005No Hit
GAGCCCCTGATAGTCAACAT10.13531799729364005No Hit
ACATGGAGACGAAAGTAGACACCATCACTGAGGAC10.13531799729364005No Hit
TGGGTCGCGAGAATAGACACT10.13531799729364005No Hit
GGACTGAGATCGGCGAGAAATTATGGCAAA10.13531799729364005No Hit
CCAACAAATATGAGATCGTCGTCAAC10.13531799729364005No Hit
TCCAAGTCGAATACACACCGAA10.13531799729364005No Hit
GATATTGTAGTATGGCTGACGA10.13531799729364005No Hit
AGGACACTGGCTCAGGGAGACTAC10.13531799729364005No Hit
GCAAGTAGAATCCGTCCAGCG10.13531799729364005No Hit
ACAACAACGCCGGGCCAGTCA10.13531799729364005No Hit
AGATCGGCGAGAAATTATGGCAAAAGG10.13531799729364005No Hit
CAGTCGAGGCTCTCAGATATTTC10.13531799729364005No Hit
AGGACACTGGCTCAGGGAGACC10.13531799729364005No Hit
TCACTGAGGACATACATGAAG10.13531799729364005No Hit
CAAGCGATCGAAGACGCAGTCCCACTACTCAG10.13531799729364005No Hit
GGATACAGAGGAGGTAGTTGC10.13531799729364005No Hit
TGCATCTTCAGGAGGCTGAGGAGATATCGGAAGA10.13531799729364005No Hit
GCAAAACACACACATATTATGCACAGACCCCACAC10.13531799729364005No Hit
ATTTCGGCGAGGTAATACTAAAGAAGAGGCACACA10.13531799729364005No Hit
ATCGCCGCAGGATACTGAAGAA10.13531799729364005No Hit
TATTGTAGTATGGCTGACGAAGATGC10.13531799729364005No Hit
CTATTGCCTTGACCACTCTGCG10.13531799729364005No Hit
ACGAAAGTAGACACCATCACTGAGGACATA10.13531799729364005No Hit
ATGGCTATGAAGGAGCACCTCGAGAA10.13531799729364005No Hit
AGAGGAGGTAGTTGCATAACACAGCACC10.13531799729364005No Hit
AAACGAGTGCATCTTCAGGAG10.13531799729364005No Hit
CAGTGTTACCTACCCGCAATC10.13531799729364005No Hit
CTATGAGAACGCACGGAGAATCAT10.13531799729364005No Hit
CGCCCGGAACAGAATAGGATA10.13531799729364005No Hit
AATCACAACGGTTCTCCCACCC10.13531799729364005No Hit
AGGCTGAGGAGATATCGGAA10.13531799729364005No Hit
AAGAAGCACACTGGGAACCTC10.13531799729364005No Hit
GAAGAGTACCTCCAACAGCTC10.13531799729364005No Hit
CTGAAGAAGCACACTGGGAACCCA10.13531799729364005No Hit
GGGTCGCGAGAATAGACACT10.13531799729364005No Hit
CCAATGTCTGTCCTTGACCCA10.13531799729364005No Hit
CAAGGCACCACGGTTAATAGC10.13531799729364005No Hit
CTGGACTGAGATCGGCGAGAAATTATGGC10.13531799729364005No Hit
CACGCAAGTAGAATCCGTCCAGCG10.13531799729364005No Hit
TATGAGATCGTCGTCAACGGG10.13531799729364005No Hit
CAGGACAGAATGCAATTTCGGCGAGGTA10.13531799729364005No Hit
AACAACGCCGGGCCAGTCACATCG10.13531799729364005No Hit
CTATTGCCTTGACCACTCTGCGTTCGATGCCCAC10.13531799729364005No Hit
CATGGAGACGAAAGTAGACACCATCACTGAGGACA10.13531799729364005No Hit
CGACTCGACAACGACGGCAT10.13531799729364005No Hit
CAATTTCGGCGAGGTAATACTCAAGAAGAGGCAC10.13531799729364005No Hit
AGGCTGAGGAGATATCGGAAGAA10.13531799729364005No Hit
CGCTACATCCTGGACTCTGT10.13531799729364005No Hit
CACAACTCAAGACAACCACTC10.13531799729364005No Hit
CGTCACAGTCGAGGCTCTCA10.13531799729364005No Hit
CGCATGGGTCGCGAGAATAGAA10.13531799729364005No Hit
GCATGGCTATGAAGGAGCACCTCGA10.13531799729364005No Hit
GCATCTTCAGGAGGCTGAGGAGATATCGGAAGA10.13531799729364005No Hit
ATCCAAGTCGAATACACACCG10.13531799729364005No Hit
TGGACTGAGATCGGCGAGAAATTATGGC10.13531799729364005No Hit
GATCGGCGAGAAATTATGGCA10.13531799729364005No Hit
CATGAAGAATGAAGCCAATGCC10.13531799729364005No Hit
AATTTCGGCGAGGTAATACTCAAGAAGAGGCACA10.13531799729364005No Hit

[OK]Adapter Content

Adapter graph