##FastQC	0.11.9
>>Basic Statistics	pass
#Measure	Value
Filename	S1_Sudafrica.Tombus-like_2_monopartite.15-35nt.reverse-mapped.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106
Sequences flagged as poor quality	0
Sequence length	15-30
%GC	52
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	37.0	37.0	37.0	37.0	37.0	37.0
2	36.660377358490564	37.0	37.0	37.0	37.0	37.0
3	36.43396226415094	37.0	37.0	37.0	37.0	37.0
4	35.924528301886795	37.0	37.0	37.0	37.0	37.0
5	36.64150943396226	37.0	37.0	37.0	37.0	37.0
6	36.43396226415094	37.0	37.0	37.0	37.0	37.0
7	36.77358490566038	37.0	37.0	37.0	37.0	37.0
8	36.39622641509434	37.0	37.0	37.0	37.0	37.0
9	36.264150943396224	37.0	37.0	37.0	37.0	37.0
10	36.39622641509434	37.0	37.0	37.0	37.0	37.0
11	35.83018867924528	37.0	37.0	37.0	37.0	37.0
12	36.41509433962264	37.0	37.0	37.0	37.0	37.0
13	36.64150943396226	37.0	37.0	37.0	37.0	37.0
14	36.64150943396226	37.0	37.0	37.0	37.0	37.0
15	36.41509433962264	37.0	37.0	37.0	37.0	37.0
16	36.51923076923077	37.0	37.0	37.0	37.0	37.0
17	36.878787878787875	NaN	NaN	NaN	NaN	NaN
18	36.62105263157895	NaN	NaN	NaN	NaN	NaN
19	36.59574468085106	NaN	NaN	NaN	NaN	NaN
20	36.71739130434783	NaN	NaN	NaN	NaN	NaN
21	37.0	NaN	NaN	NaN	NaN	NaN
22	37.0	NaN	NaN	NaN	NaN	NaN
23	37.0	NaN	NaN	NaN	NaN	NaN
24	37.0	NaN	NaN	NaN	NaN	NaN
25	37.0	NaN	NaN	NaN	NaN	NaN
26	37.0	NaN	NaN	NaN	NaN	NaN
27	37.0	NaN	NaN	NaN	NaN	NaN
28	37.0	NaN	NaN	NaN	NaN	NaN
29	37.0	NaN	NaN	NaN	NaN	NaN
30	37.0	NaN	NaN	NaN	NaN	NaN
>>END_MODULE
>>Per tile sequence quality	warn
#Tile	Base	Mean
2120	1	0.0
2120	2	0.0
2120	3	0.0
2120	4	NaN
2120	5	0.0
2120	6	0.0
2120	7	0.0
2120	8	0.0
2120	9	NaN
2120	10	NaN
2120	11	NaN
2120	12	NaN
2120	13	0.0
2120	14	0.0
2120	15	NaN
2120	16	-5.4
2120	17	-5.4
2120	18	-4.8
2120	19	-4.8
2120	20	-4.8
2120	21	-4.2
2120	22	-1.8
2120	23	-1.2
2120	24	-0.6
2120	25	-0.6
2120	26	-0.6
2120	27	-0.6
2120	28	-0.6
2134	1	0.0
2134	2	0.0
2134	3	0.0
2134	4	NaN
2134	5	0.0
2134	6	0.0
2134	7	0.0
2134	8	0.0
2134	9	NaN
2134	10	NaN
2134	11	NaN
2134	12	NaN
2134	13	0.0
2134	14	0.0
2134	15	NaN
2134	16	0.5999999999999996
2134	17	0.5999999999999996
2134	18	-4.8
2134	19	-4.8
2134	20	-4.8
2134	21	-4.2
2134	22	-1.8
2134	23	-1.2
2134	24	-0.6
2134	25	-0.6
2134	26	-0.6
2134	27	-0.6
2134	28	-0.6
2153	1	0.0
2153	2	0.0
2153	3	0.0
2153	4	NaN
2153	5	0.0
2153	6	0.0
2153	7	0.0
2153	8	0.0
2153	9	NaN
2153	10	NaN
2153	11	NaN
2153	12	NaN
2153	13	0.0
2153	14	0.0
2153	15	NaN
2153	16	0.5999999999999996
2153	17	0.5999999999999996
2153	18	1.2000000000000002
2153	19	1.2000000000000002
2153	20	1.2000000000000002
2153	21	1.7999999999999998
2153	22	-1.8
2153	23	-1.2
2153	24	-0.6
2153	25	-0.6
2153	26	-0.6
2153	27	-0.6
2153	28	-0.6
2156	1	0.0
2156	2	0.0
2156	3	0.0
2156	4	NaN
2156	5	0.0
2156	6	0.0
2156	7	0.0
2156	8	0.0
2156	9	NaN
2156	10	NaN
2156	11	NaN
2156	12	NaN
2156	13	0.0
2156	14	0.0
2156	15	NaN
2156	16	0.5999999999999996
2156	17	0.5999999999999996
2156	18	1.2000000000000002
2156	19	1.2000000000000002
2156	20	1.2000000000000002
2156	21	1.7999999999999998
2156	22	4.2
2156	23	-1.2
2156	24	-0.6
2156	25	-0.6
2156	26	-0.6
2156	27	-0.6
2156	28	-0.6
2176	1	0.0
2176	2	0.0
2176	3	0.0
2176	4	NaN
2176	5	0.0
2176	6	0.0
2176	7	0.0
2176	8	0.0
2176	9	NaN
2176	10	NaN
2176	11	NaN
2176	12	NaN
2176	13	0.0
2176	14	0.0
2176	15	NaN
2176	16	0.5999999999999996
2176	17	0.5999999999999996
2176	18	1.2000000000000002
2176	19	1.2000000000000002
2176	20	1.2000000000000002
2176	21	1.7999999999999998
2176	22	-1.8
2176	23	-1.2
2176	24	-0.6
2176	25	-0.6
2176	26	-0.6
2176	27	-0.6
2176	28	-0.6
2177	1	0.0
2177	2	0.0
2177	3	0.0
2177	4	NaN
2177	5	0.0
2177	6	0.0
2177	7	0.0
2177	8	0.0
2177	9	NaN
2177	10	NaN
2177	11	NaN
2177	12	NaN
2177	13	0.0
2177	14	0.0
2177	15	NaN
2177	16	0.5999999999999996
2177	17	0.5999999999999996
2177	18	1.2000000000000002
2177	19	1.2000000000000002
2177	20	1.2000000000000002
2177	21	1.7999999999999998
2177	22	-1.8
2177	23	-1.2
2177	24	-0.6
2177	25	-0.6
2177	26	-0.6
2177	27	-0.6
2177	28	-0.6
2228	1	0.0
2228	2	0.0
2228	3	0.0
2228	4	NaN
2228	5	0.0
2228	6	0.0
2228	7	0.0
2228	8	0.0
2228	9	NaN
2228	10	NaN
2228	11	NaN
2228	12	NaN
2228	13	0.0
2228	14	0.0
2228	15	NaN
2228	16	0.5999999999999996
2228	17	0.5999999999999996
2228	18	1.2000000000000002
2228	19	1.2000000000000002
2228	20	1.2000000000000002
2228	21	1.7999999999999998
2228	22	4.2
2228	23	4.8
2228	24	5.4
2228	25	5.4
2228	26	5.4
2228	27	5.4
2228	28	5.4
2234	1	0.0
2234	2	0.0
2234	3	0.0
2234	4	NaN
2234	5	0.0
2234	6	0.0
2234	7	0.0
2234	8	0.0
2234	9	NaN
2234	10	NaN
2234	11	NaN
2234	12	NaN
2234	13	0.0
2234	14	0.0
2234	15	NaN
2234	16	0.5999999999999996
2234	17	0.5999999999999996
2234	18	1.2000000000000002
2234	19	1.2000000000000002
2234	20	1.2000000000000002
2234	21	-4.2
2234	22	-1.8
2234	23	-1.2
2234	24	-0.6
2234	25	-0.6
2234	26	-0.6
2234	27	-0.6
2234	28	-0.6
2257	1	0.0
2257	2	0.0
2257	3	0.0
2257	4	NaN
2257	5	0.0
2257	6	0.0
2257	7	0.0
2257	8	0.0
2257	9	NaN
2257	10	NaN
2257	11	NaN
2257	12	NaN
2257	13	0.0
2257	14	0.0
2257	15	NaN
2257	16	0.5999999999999996
2257	17	0.5999999999999996
2257	18	1.2000000000000002
2257	19	1.2000000000000002
2257	20	1.2000000000000002
2257	21	1.7999999999999998
2257	22	-1.8
2257	23	-1.2
2257	24	-0.6
2257	25	-0.6
2257	26	-0.6
2257	27	-0.6
2257	28	-0.6
2258	1	0.0
2258	2	0.0
2258	3	0.0
2258	4	NaN
2258	5	0.0
2258	6	0.0
2258	7	0.0
2258	8	0.0
2258	9	NaN
2258	10	NaN
2258	11	NaN
2258	12	NaN
2258	13	0.0
2258	14	0.0
2258	15	NaN
2258	16	0.5999999999999996
2258	17	0.5999999999999996
2258	18	1.2000000000000002
2258	19	1.2000000000000002
2258	20	1.2000000000000002
2258	21	1.7999999999999998
2258	22	4.2
2258	23	4.8
2258	24	-0.6
2258	25	-0.6
2258	26	-0.6
2258	27	-0.6
2258	28	-0.6
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
29	1.0
30	1.0
31	0.0
32	2.0
33	2.0
34	3.0
35	5.0
36	11.0
37	81.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	12.264150943396226	9.433962264150944	55.660377358490564	22.641509433962266
2	14.150943396226415	16.037735849056602	46.22641509433962	23.58490566037736
3	13.20754716981132	19.81132075471698	35.84905660377358	31.132075471698112
4	14.150943396226415	6.60377358490566	45.28301886792453	33.9622641509434
5	21.69811320754717	14.150943396226415	24.528301886792452	39.62264150943396
6	39.62264150943396	28.30188679245283	15.09433962264151	16.9811320754717
7	22.641509433962266	35.84905660377358	24.528301886792452	16.9811320754717
8	19.81132075471698	23.58490566037736	46.22641509433962	10.377358490566039
9	37.735849056603776	24.528301886792452	26.41509433962264	11.320754716981133
10	33.9622641509434	11.320754716981133	38.67924528301887	16.037735849056602
11	37.735849056603776	16.9811320754717	24.528301886792452	20.754716981132077
12	17.92452830188679	34.90566037735849	22.641509433962266	24.528301886792452
13	23.58490566037736	11.320754716981133	35.84905660377358	29.245283018867923
14	33.9622641509434	11.320754716981133	37.735849056603776	16.9811320754717
15	44.339622641509436	11.320754716981133	19.81132075471698	24.528301886792452
16	43.269230769230774	15.384615384615385	10.576923076923077	30.76923076923077
17	19.19191919191919	10.1010101010101	21.21212121212121	49.494949494949495
18	24.210526315789473	16.842105263157894	20.0	38.94736842105263
19	35.1063829787234	12.76595744680851	14.893617021276595	37.234042553191486
20	45.65217391304348	23.91304347826087	18.478260869565215	11.956521739130435
21	44.31818181818182	10.227272727272728	10.227272727272728	35.22727272727273
22	7.4074074074074066	37.03703703703704	37.03703703703704	18.51851851851852
23	0.0	23.52941176470588	64.70588235294117	11.76470588235294
24	50.0	0.0	0.0	50.0
25	16.666666666666664	0.0	50.0	33.33333333333333
26	0.0	66.66666666666666	33.33333333333333	0.0
27	0.0	80.0	0.0	20.0
28	0.0	40.0	40.0	20.0
29	0.0	100.0	0.0	0.0
30	0.0	100.0	0.0	0.0
>>END_MODULE
>>Per sequence GC content	fail
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.5
27	1.0
28	3.5
29	6.5
30	7.0
31	8.0
32	9.0
33	7.0
34	4.0
35	3.0
36	2.5
37	4.0
38	6.0
39	6.5
40	6.5
41	4.5
42	3.0
43	5.5
44	8.0
45	12.5
46	17.5
47	19.0
48	16.5
49	13.0
50	13.5
51	14.0
52	14.5
53	14.5
54	13.5
55	12.0
56	12.0
57	13.5
58	13.5
59	13.5
60	22.5
61	30.0
62	27.5
63	26.5
64	19.5
65	12.0
66	11.0
67	10.0
68	10.0
69	7.0
70	3.0
71	2.5
72	3.0
73	3.0
74	2.0
75	1.0
76	0.5
77	0.0
78	0.0
79	0.0
80	0.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	0.0
29	0.0
30	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
15	2.0
16	5.0
17	4.0
18	1.0
19	2.0
20	4.0
21	61.0
22	10.0
23	11.0
24	0.0
25	0.0
26	1.0
27	0.0
28	4.0
29	0.0
30	1.0
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Deduplicated Percentage	54.71698113207547
#Duplication Level	Percentage of deduplicated	Percentage of total
1	65.51724137931035	35.84905660377358
2	24.137931034482758	26.41509433962264
3	1.7241379310344827	2.8301886792452833
4	5.172413793103448	11.320754716981133
5	0.0	0.0
6	1.7241379310344827	5.660377358490567
7	0.0	0.0
8	0.0	0.0
9	0.0	0.0
>10	1.7241379310344827	17.92452830188679
>50	0.0	0.0
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
TTCTCGATGTGACTGGCCCGG	19	17.92452830188679	No Hit
TCTCGATGTGACTGGCCCGGC	6	5.660377358490567	No Hit
CTTGTATTTGGTGGCACTCATTT	4	3.7735849056603774	No Hit
TTTTGGCTGCTTGCAGGAGAA	4	3.7735849056603774	No Hit
TGGTCCGTAGTCTCCCTGAGC	4	3.7735849056603774	No Hit
TATCCGAAATTGTATGACTAGTT	3	2.8301886792452833	No Hit
CGACTGTGACGTGGGCATCGAA	2	1.8867924528301887	No Hit
CTCGATGTGACTGGCCCGGCG	2	1.8867924528301887	No Hit
TTGCGGGTAGGTAACA	2	1.8867924528301887	No Hit
ATTTTATAGGTCATGC	2	1.8867924528301887	No Hit
CTTGCAGGAGAAGAATGGTGCC	2	1.8867924528301887	No Hit
TCTTCAAACTGACGGCCCATG	2	1.8867924528301887	No Hit
TATCTGAGAGCCTCGACTGTGACGTAAA	2	1.8867924528301887	No Hit
GCATCCGCATGTTTTTTGGCT	2	1.8867924528301887	No Hit
TCCGAAATTGTATGACTAGTT	2	1.8867924528301887	No Hit
GTCCTTTGTGTAGGTGTGGTGTTCCAAT	2	1.8867924528301887	No Hit
TCTCGCGACCCATGC	2	1.8867924528301887	No Hit
GAAATATCTGAGAGCCTCGACA	2	1.8867924528301887	No Hit
ATTCTCGCGACCCATGC	2	1.8867924528301887	No Hit
TCAAACTGACGGCCCATGGTG	2	1.8867924528301887	No Hit
GCCTGCTATCGCTAGACA	1	0.9433962264150944	No Hit
CATCCGCATGTTTTTTGGCT	1	0.9433962264150944	No Hit
CAATTTCTTTGTGTAGCGGCCA	1	0.9433962264150944	No Hit
GGTGATGTCTCCTGAGTTGAC	1	0.9433962264150944	No Hit
TTTCTCGATGTGACTGGCCCG	1	0.9433962264150944	No Hit
CCGTCGTTGTCGAGTCGTACCA	1	0.9433962264150944	No Hit
ACACAGAGTCCAGGATGTAGC	1	0.9433962264150944	No Hit
TCACTATTCCTGTCCTTTG	1	0.9433962264150944	No Hit
TTCTCGCGACCCATGC	1	0.9433962264150944	No Hit
TTCTCGATGTGACTGGCCCG	1	0.9433962264150944	No Hit
GTATGTGGTCCGTAGTCTCCC	1	0.9433962264150944	No Hit
TCCGTAGTCTCCCTGAG	1	0.9433962264150944	No Hit
CGGCCTAGCTCCATGTTAAAG	1	0.9433962264150944	No Hit
AGGCAATAGAATTTTGGGTGGGA	1	0.9433962264150944	No Hit
TCCAAGCCATCCTGCCCGTACC	1	0.9433962264150944	No Hit
CAGCCTCCTGAAGATGCACTC	1	0.9433962264150944	No Hit
TAGTGTATGGAGTGTCTATTC	1	0.9433962264150944	No Hit
GATCTCATATTTGTTGGTGTA	1	0.9433962264150944	No Hit
TTCAAACTGACGGCCCA	1	0.9433962264150944	No Hit
ATTCACTATTCCTGTCCTTTG	1	0.9433962264150944	No Hit
TATCCTATTCTGTTCCGGGCG	1	0.9433962264150944	No Hit
CAATATCCGAAATTGTATGACTAGTT	1	0.9433962264150944	No Hit
CGACTTCATGTATGTCCTCACCT	1	0.9433962264150944	No Hit
CGATCTCAGTCCAGTATCCGA	1	0.9433962264150944	No Hit
CAAGGACAGACATTGGCATGCAA	1	0.9433962264150944	No Hit
TCGTGTAAGTTTGGGATGAGCA	1	0.9433962264150944	No Hit
CCATCACTACAGAGTCGTCCC	1	0.9433962264150944	No Hit
AGTCTCCTCGAGCGCGTCCAC	1	0.9433962264150944	No Hit
ATATCCGAAATTGTATGACTA	1	0.9433962264150944	No Hit
CAAGGACAGACATTGGCATGC	1	0.9433962264150944	No Hit
GTCCTGGACTGCGTCGAAAA	1	0.9433962264150944	No Hit
TCCTGGACTGCGTCGAAAAA	1	0.9433962264150944	No Hit
CTGTGGAAATATCTGAGAGCC	1	0.9433962264150944	No Hit
AGGCAATAGAATTTTGGGTGG	1	0.9433962264150944	No Hit
CTTCTAGGATTGTGGGCTTGTGTCGTCCAA	1	0.9433962264150944	No Hit
GATGTGACTGGCCCGGCGTTG	1	0.9433962264150944	No Hit
GGAAAACACAGAGTCCAGGACCA	1	0.9433962264150944	No Hit
CGATGTGACTGGCCCGGCG	1	0.9433962264150944	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10	0.0	0.0	0.0	0.0	0.0
11	0.0	0.0	0.0	0.0	0.0
12	0.0	0.0	0.0	0.0	0.0
13	0.0	0.0	0.0	0.0	0.0
14	0.0	0.0	0.0	0.0	0.0
15	0.0	0.0	0.0	0.0	0.0
16	0.0	0.0	0.0	0.0	0.0
17	0.0	0.0	0.0	0.0	0.0
18	0.0	0.0	0.0	0.0	0.0
19	0.0	0.0	0.0	0.0	0.0
>>END_MODULE
