FastQCFastQC Report
Fri 14 Oct 2022
S1.Tombus-like_2_monopartite.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.Tombus-like_2_monopartite.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110
Sequences flagged as poor quality0
Sequence length20-38
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCTCGATGTGACTGGCCCGG1816.363636363636363No Hit
TGCTTTTCAGCTTTGCACATCGGTGTGTATTCGACTTG1210.909090909090908No Hit
CAATATCCGAAATTGTATGACTAGTTGGGAA76.363636363636363No Hit
TCTCGATGTGACTGGCCCGGC65.454545454545454No Hit
CTTGTATTTGGTGGCACTCATTT43.6363636363636362No Hit
TTTTGGCTGCTTGCAGGAGAA43.6363636363636362No Hit
TGGTCCGTAGTCTCCCTGAGC43.6363636363636362No Hit
TATCCGAAATTGTATGACTAGTT32.727272727272727No Hit
CGACTGTGACGTGGGCATCGAA21.8181818181818181No Hit
CTCGATGTGACTGGCCCGGCG21.8181818181818181No Hit
CTTGCAGGAGAAGAATGGTGCC21.8181818181818181No Hit
TCTTCAAACTGACGGCCCATG21.8181818181818181No Hit
TATCTGAGAGCCTCGACTGTGACGTAAA21.8181818181818181No Hit
GCATCCGCATGTTTTTTGGCT21.8181818181818181No Hit
TCCGAAATTGTATGACTAGTT21.8181818181818181No Hit
GTCCTTTGTGTAGGTGTGGTGTTCCAAT21.8181818181818181No Hit
GAAATATCTGAGAGCCTCGACA21.8181818181818181No Hit
TCAAACTGACGGCCCATGGTG21.8181818181818181No Hit
CATCCGCATGTTTTTTGGCT10.9090909090909091No Hit
CAATTTCTTTGTGTAGCGGCCA10.9090909090909091No Hit
GGTGATGTCTCCTGAGTTGAC10.9090909090909091No Hit
TTTCTCGATGTGACTGGCCCG10.9090909090909091No Hit
CCGTCGTTGTCGAGTCGTACCA10.9090909090909091No Hit
ACACAGAGTCCAGGATGTAGC10.9090909090909091No Hit
TTCTCGATGTGACTGGCCCG10.9090909090909091No Hit
GTATGTGGTCCGTAGTCTCCC10.9090909090909091No Hit
CGGCCTAGCTCCATGTTAAAG10.9090909090909091No Hit
AGGCAATAGAATTTTGGGTGGGA10.9090909090909091No Hit
TCCAAGCCATCCTGCCCGTACC10.9090909090909091No Hit
CAGCCTCCTGAAGATGCACTC10.9090909090909091No Hit
TAGTGTATGGAGTGTCTATTC10.9090909090909091No Hit
GATCTCATATTTGTTGGTGTA10.9090909090909091No Hit
ATTCACTATTCCTGTCCTTTG10.9090909090909091No Hit
TATCCTATTCTGTTCCGGGCG10.9090909090909091No Hit
CAATATCCGAAATTGTATGACTAGTT10.9090909090909091No Hit
CGACTTCATGTATGTCCTCACCT10.9090909090909091No Hit
CGATCTCAGTCCAGTATCCGA10.9090909090909091No Hit
CAAGGACAGACATTGGCATGCAA10.9090909090909091No Hit
TCGTGTAAGTTTGGGATGAGCA10.9090909090909091No Hit
CCATCACTACAGAGTCGTCCC10.9090909090909091No Hit
AGTCTCCTCGAGCGCGTCCAC10.9090909090909091No Hit
ATATCCGAAATTGTATGACTA10.9090909090909091No Hit
CAAGGACAGACATTGGCATGC10.9090909090909091No Hit
GTCCTGGACTGCGTCGAAAA10.9090909090909091No Hit
TCCTGGACTGCGTCGAAAAA10.9090909090909091No Hit
CTGTGGAAATATCTGAGAGCC10.9090909090909091No Hit
AGGCAATAGAATTTTGGGTGG10.9090909090909091No Hit
CTTCTAGGATTGTGGGCTTGTGTCGTCCAA10.9090909090909091No Hit
GATGTGACTGGCCCGGCGTTG10.9090909090909091No Hit
GGAAAACACAGAGTCCAGGACCA10.9090909090909091No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)