##FastQC	0.11.9
>>Basic Statistics	pass
#Measure	Value
Filename	S1_Sudafrica.Tombus-like_virus_segment_1.15-35nt.reverse-mapped.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106
Sequences flagged as poor quality	0
Sequence length	15-30
%GC	49
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	37.0	37.0	37.0	37.0	37.0	37.0
2	35.75471698113208	37.0	37.0	37.0	25.0	37.0
3	35.113207547169814	37.0	37.0	37.0	25.0	37.0
4	36.41509433962264	37.0	37.0	37.0	37.0	37.0
5	36.509433962264154	37.0	37.0	37.0	37.0	37.0
6	35.924528301886795	37.0	37.0	37.0	37.0	37.0
7	36.39622641509434	37.0	37.0	37.0	37.0	37.0
8	36.39622641509434	37.0	37.0	37.0	37.0	37.0
9	36.528301886792455	37.0	37.0	37.0	37.0	37.0
10	36.528301886792455	37.0	37.0	37.0	37.0	37.0
11	36.509433962264154	37.0	37.0	37.0	37.0	37.0
12	36.41509433962264	37.0	37.0	37.0	37.0	37.0
13	36.660377358490564	37.0	37.0	37.0	37.0	37.0
14	36.528301886792455	37.0	37.0	37.0	37.0	37.0
15	36.16981132075472	37.0	37.0	37.0	37.0	37.0
16	36.14563106796116	37.0	37.0	37.0	37.0	37.0
17	36.36734693877551	NaN	NaN	NaN	NaN	NaN
18	36.75	NaN	NaN	NaN	NaN	NaN
19	36.6	NaN	NaN	NaN	NaN	NaN
20	36.319148936170215	NaN	NaN	NaN	NaN	NaN
21	36.582417582417584	NaN	NaN	NaN	NaN	NaN
22	36.191489361702125	NaN	NaN	NaN	NaN	NaN
23	34.44	NaN	NaN	NaN	NaN	NaN
24	36.333333333333336	NaN	NaN	NaN	NaN	NaN
25	37.0	NaN	NaN	NaN	NaN	NaN
26	37.0	NaN	NaN	NaN	NaN	NaN
27	37.0	NaN	NaN	NaN	NaN	NaN
28	37.0	NaN	NaN	NaN	NaN	NaN
29	37.0	NaN	NaN	NaN	NaN	NaN
30	37.0	NaN	NaN	NaN	NaN	NaN
>>END_MODULE
>>Per tile sequence quality	fail
#Tile	Base	Mean
2113	1	0.0
2113	2	0.0
2113	3	0.0
2113	4	0.0
2113	5	0.0
2113	6	3.25
2113	7	-22.75
2113	8	0.0
2113	9	0.0
2113	10	0.0
2113	11	0.0
2113	12	0.0
2113	13	0.0
2113	14	0.0
2113	15	0.0
2113	16	-10.5
2113	17	1.5
2113	18	0.0
2113	19	0.0
2113	20	-22.75
2113	21	0.0
2113	22	-18.5
2113	23	-9.25
2113	24	-4.625
2113	25	-4.625
2132	1	0.0
2132	2	0.0
2132	3	0.0
2132	4	0.0
2132	5	0.0
2132	6	-22.75
2132	7	3.25
2132	8	0.0
2132	9	0.0
2132	10	0.0
2132	11	0.0
2132	12	0.0
2132	13	0.0
2132	14	0.0
2132	15	0.0
2132	16	1.5
2132	17	-10.5
2132	18	0.0
2132	19	0.0
2132	20	3.25
2132	21	0.0
2132	22	18.5
2132	23	27.75
2132	24	32.375
2132	25	32.375
2152	1	0.0
2152	2	0.0
2152	3	0.0
2152	4	0.0
2152	5	0.0
2152	6	3.25
2152	7	3.25
2152	8	0.0
2152	9	0.0
2152	10	0.0
2152	11	0.0
2152	12	0.0
2152	13	0.0
2152	14	0.0
2152	15	0.0
2152	16	1.5
2152	17	1.5
2152	18	0.0
2152	19	0.0
2152	20	3.25
2152	21	0.0
2152	22	18.5
2152	23	-9.25
2152	24	-4.625
2152	25	-4.625
2178	1	0.0
2178	2	0.0
2178	3	0.0
2178	4	0.0
2178	5	0.0
2178	6	3.25
2178	7	3.25
2178	8	0.0
2178	9	0.0
2178	10	0.0
2178	11	0.0
2178	12	0.0
2178	13	0.0
2178	14	0.0
2178	15	0.0
2178	16	1.5
2178	17	1.5
2178	18	0.0
2178	19	0.0
2178	20	3.25
2178	21	0.0
2178	22	-18.5
2178	23	-9.25
2178	24	-4.625
2178	25	-4.625
2203	1	0.0
2203	2	0.0
2203	3	0.0
2203	4	0.0
2203	5	0.0
2203	6	3.25
2203	7	3.25
2203	8	0.0
2203	9	0.0
2203	10	0.0
2203	11	0.0
2203	12	0.0
2203	13	0.0
2203	14	0.0
2203	15	0.0
2203	16	1.5
2203	17	1.5
2203	18	0.0
2203	19	0.0
2203	20	3.25
2203	21	0.0
2203	22	-18.5
2203	23	-9.25
2203	24	-4.625
2203	25	-4.625
2229	1	0.0
2229	2	0.0
2229	3	0.0
2229	4	0.0
2229	5	0.0
2229	6	3.25
2229	7	3.25
2229	8	0.0
2229	9	0.0
2229	10	0.0
2229	11	0.0
2229	12	0.0
2229	13	0.0
2229	14	0.0
2229	15	0.0
2229	16	1.5
2229	17	1.5
2229	18	0.0
2229	19	0.0
2229	20	3.25
2229	21	0.0
2229	22	18.5
2229	23	-9.25
2229	24	-4.625
2229	25	-4.625
2251	1	0.0
2251	2	0.0
2251	3	0.0
2251	4	0.0
2251	5	0.0
2251	6	3.25
2251	7	3.25
2251	8	0.0
2251	9	0.0
2251	10	0.0
2251	11	0.0
2251	12	0.0
2251	13	0.0
2251	14	0.0
2251	15	0.0
2251	16	1.5
2251	17	1.5
2251	18	0.0
2251	19	0.0
2251	20	3.25
2251	21	0.0
2251	22	18.5
2251	23	27.75
2251	24	-4.625
2251	25	-4.625
2267	1	0.0
2267	2	0.0
2267	3	0.0
2267	4	0.0
2267	5	0.0
2267	6	3.25
2267	7	3.25
2267	8	0.0
2267	9	0.0
2267	10	0.0
2267	11	0.0
2267	12	0.0
2267	13	0.0
2267	14	0.0
2267	15	0.0
2267	16	1.5
2267	17	1.5
2267	18	0.0
2267	19	0.0
2267	20	3.25
2267	21	0.0
2267	22	-18.5
2267	23	-9.25
2267	24	-4.625
2267	25	-4.625
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
27	1.0
28	0.0
29	1.0
30	1.0
31	1.0
32	1.0
33	5.0
34	2.0
35	4.0
36	11.0
37	79.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	23.58490566037736	23.58490566037736	21.69811320754717	31.132075471698112
2	30.18867924528302	22.641509433962266	24.528301886792452	22.641509433962266
3	20.754716981132077	27.358490566037734	22.641509433962266	29.245283018867923
4	28.30188679245283	24.528301886792452	33.9622641509434	13.20754716981132
5	28.30188679245283	16.9811320754717	34.90566037735849	19.81132075471698
6	26.41509433962264	24.528301886792452	20.754716981132077	28.30188679245283
7	14.150943396226415	28.30188679245283	40.56603773584906	16.9811320754717
8	32.075471698113205	30.18867924528302	19.81132075471698	17.92452830188679
9	33.0188679245283	12.264150943396226	25.471698113207548	29.245283018867923
10	15.09433962264151	32.075471698113205	26.41509433962264	26.41509433962264
11	17.92452830188679	19.81132075471698	32.075471698113205	30.18867924528302
12	23.58490566037736	17.92452830188679	23.58490566037736	34.90566037735849
13	22.641509433962266	32.075471698113205	22.641509433962266	22.641509433962266
14	33.9622641509434	11.320754716981133	31.132075471698112	23.58490566037736
15	16.037735849056602	36.79245283018868	18.867924528301888	28.30188679245283
16	20.388349514563107	20.388349514563107	33.980582524271846	25.24271844660194
17	16.3265306122449	22.448979591836736	31.63265306122449	29.591836734693878
18	30.208333333333332	32.29166666666667	18.75	18.75
19	38.94736842105263	16.842105263157894	12.631578947368421	31.57894736842105
20	18.085106382978726	31.914893617021278	32.97872340425532	17.02127659574468
21	14.285714285714285	34.065934065934066	10.989010989010989	40.65934065934066
22	10.638297872340425	14.893617021276595	6.382978723404255	68.08510638297872
23	36.0	24.0	32.0	8.0
24	11.11111111111111	77.77777777777779	5.555555555555555	5.555555555555555
25	13.333333333333334	46.666666666666664	0.0	40.0
26	10.0	60.0	20.0	10.0
27	14.285714285714285	71.42857142857143	0.0	14.285714285714285
28	0.0	100.0	0.0	0.0
29	0.0	83.33333333333334	0.0	16.666666666666664
30	0.0	0.0	0.0	100.0
>>END_MODULE
>>Per sequence GC content	fail
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.5
27	1.0
28	1.0
29	3.5
30	6.0
31	7.0
32	8.0
33	6.0
34	4.5
35	3.5
36	2.0
37	2.5
38	4.5
39	7.0
40	10.0
41	11.5
42	9.5
43	9.0
44	11.0
45	15.5
46	19.5
47	22.0
48	25.0
49	26.0
50	24.5
51	23.0
52	22.0
53	20.5
54	21.0
55	23.0
56	23.5
57	22.0
58	19.5
59	18.5
60	14.0
61	8.5
62	8.0
63	7.0
64	6.0
65	6.0
66	5.0
67	4.0
68	4.0
69	2.5
70	0.5
71	0.0
72	0.0
73	0.0
74	0.0
75	0.0
76	0.0
77	0.5
78	1.0
79	1.0
80	1.0
81	1.0
82	1.0
83	0.5
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	0.0
29	0.0
30	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
15	3.0
16	5.0
17	2.0
18	1.0
19	1.0
20	3.0
21	44.0
22	22.0
23	7.0
24	3.0
25	5.0
26	3.0
27	0.0
28	1.0
29	5.0
30	1.0
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Deduplicated Percentage	68.86792452830188
#Duplication Level	Percentage of deduplicated	Percentage of total
1	71.23287671232876	49.056603773584904
2	16.43835616438356	22.641509433962266
3	9.58904109589041	19.81132075471698
4	1.36986301369863	3.7735849056603774
5	1.36986301369863	4.716981132075472
6	0.0	0.0
7	0.0	0.0
8	0.0	0.0
9	0.0	0.0
>10	0.0	0.0
>50	0.0	0.0
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
GAATTATAGACAAGATTGGTACGACAAAA	5	4.716981132075472	No Hit
ATCACCTGTCGCAAGT	4	3.7735849056603774	No Hit
CCATGTAGTCCCCAACGAGAG	3	2.8301886792452833	No Hit
GAATTATAGACAAGATTGGTACGA	3	2.8301886792452833	No Hit
AATGTCGAGATGATTGCCCTTCTAA	3	2.8301886792452833	No Hit
CGCGGGAATTATAGACAAGACC	3	2.8301886792452833	No Hit
CGATTGTGGTTCCGAATAGAC	3	2.8301886792452833	No Hit
AGCTGTGGCGCTATCGTACTC	3	2.8301886792452833	No Hit
CGCGACGCTCTCTCAGCTCGA	3	2.8301886792452833	No Hit
TGGCTCCTATGTTCTCACGAG	2	1.8867924528301887	No Hit
TCTTACTCAACTTGTGCACTTC	2	1.8867924528301887	No Hit
ATGTAGTCCCCAACGAGAGTA	2	1.8867924528301887	No Hit
GTAGAAAGCATGGTCCTCGG	2	1.8867924528301887	No Hit
ATTTTCCCGATACTTTGGCTC	2	1.8867924528301887	No Hit
GCGTGACGGTTGGTGAAGGCAAT	2	1.8867924528301887	No Hit
ACGAAGAACAGCGGATTGGCC	2	1.8867924528301887	No Hit
CATGTAGTCCCCAACGAGAGT	2	1.8867924528301887	No Hit
CGCGGGAATTATAGACA	2	1.8867924528301887	No Hit
TCCATGTAGTCCCCAACGAGAG	2	1.8867924528301887	No Hit
TCTTGGTGAACGGGGAAACTC	2	1.8867924528301887	No Hit
CTCGGCTTCCATTCTCCTCAC	2	1.8867924528301887	No Hit
TTTCTAAGGTGCCTATAACAGC	1	0.9433962264150944	No Hit
ATGGCTCCTATGTTCTCACGAG	1	0.9433962264150944	No Hit
CTCGGCCGCGTATCATTTCAC	1	0.9433962264150944	No Hit
TGATTAATGTATCTCTCGAGACC	1	0.9433962264150944	No Hit
CGAGGATAGCCGGGAAATACAC	1	0.9433962264150944	No Hit
TATTCCATGTAGTCCCCAACGAGAGT	1	0.9433962264150944	No Hit
GAGAATATCCAACACCGGCTA	1	0.9433962264150944	No Hit
GATTGGACTCTCCGC	1	0.9433962264150944	No Hit
TGCCCCTATTTTCCCGATACT	1	0.9433962264150944	No Hit
GGGGTTTTCCGAGATAGACAG	1	0.9433962264150944	No Hit
CAAAGTGTACATCTCTACCCAC	1	0.9433962264150944	No Hit
CGGCCGCGTATCATTTCACACC	1	0.9433962264150944	No Hit
TGTAGAAAGCATGGTCCTCGG	1	0.9433962264150944	No Hit
CGGAGCAACTTGTTATGGTACCA	1	0.9433962264150944	No Hit
ATGCTATCATCGCCGTTGACTATAA	1	0.9433962264150944	No Hit
AAGATCTGTGGCATGCTGTACC	1	0.9433962264150944	No Hit
CAGCCGTAGGTCACAC	1	0.9433962264150944	No Hit
TTAATGTCAAAATCGAGATTG	1	0.9433962264150944	No Hit
CTGTCGCAAGTATTCCATGTAGTCCCCA	1	0.9433962264150944	No Hit
GCTATCATCGCCGTTGACTACC	1	0.9433962264150944	No Hit
GATGCTATCATCGCCGTTGACC	1	0.9433962264150944	No Hit
GGGAGGCCCGGGTTG	1	0.9433962264150944	No Hit
TCCCGATACTTTGGCTCCTCA	1	0.9433962264150944	No Hit
AGGCATATTTCTTACTCAAC	1	0.9433962264150944	No Hit
ATGTCAAACAGCCTCCGAGGA	1	0.9433962264150944	No Hit
GTTGGTTGCCCGCGACTTC	1	0.9433962264150944	No Hit
CCACCAGACAACGGCATCCACCA	1	0.9433962264150944	No Hit
CACACTATGGAGTCCACTTACC	1	0.9433962264150944	No Hit
GATGCTATCATCGCCGTTGACTATAA	1	0.9433962264150944	No Hit
AGAGTGATCTGCTTCGGTATAC	1	0.9433962264150944	No Hit
TCCATGTAGTCCCCAACG	1	0.9433962264150944	No Hit
GAAGTTCGGGAGGCC	1	0.9433962264150944	No Hit
TGTCCCTCGCCTGTATCATGCC	1	0.9433962264150944	No Hit
CGCAGAGATTGTAGAAAGCAT	1	0.9433962264150944	No Hit
TCCACCAGACAACGGCATCCACC	1	0.9433962264150944	No Hit
ATGGCTCCTATGTTCTCACGA	1	0.9433962264150944	No Hit
GTAGAAAGCATGGTCCTCGGC	1	0.9433962264150944	No Hit
CTAGTGCTGAGCTTCTCTATCTTGGTGACC	1	0.9433962264150944	No Hit
CGAGATTGTCTTGGTTCGGTGTAAA	1	0.9433962264150944	No Hit
GCACCAATGTCGAGATGATTG	1	0.9433962264150944	No Hit
CGATTGTGGTTCCGAATAGACA	1	0.9433962264150944	No Hit
GTGTTCCATGTAGTCCCCAACGAGAG	1	0.9433962264150944	No Hit
ACCAATGTCGAGATGATTGCCCA	1	0.9433962264150944	No Hit
ACAAAACTCGACCTTGTGTACC	1	0.9433962264150944	No Hit
TCCAGCTGTGGCGCTATCGTA	1	0.9433962264150944	No Hit
GCCATGTCAGTGGGTTCCACC	1	0.9433962264150944	No Hit
CGCCTGTCTCATTGCTGCTGC	1	0.9433962264150944	No Hit
TCTTGTAGGATGACGGAGGAA	1	0.9433962264150944	No Hit
TGTACTTGCAGCCTCTCGATC	1	0.9433962264150944	No Hit
CTCAGCTCGATGGCATCCACG	1	0.9433962264150944	No Hit
TTTTCCCGATACTTTGGCTCCA	1	0.9433962264150944	No Hit
TATCATCGCCGTTGACTATAAA	1	0.9433962264150944	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10	0.0	0.0	0.0	0.0	0.0
11	0.0	0.0	0.0	0.0	0.0
12	0.0	0.0	0.0	0.0	0.0
13	0.0	0.0	0.0	0.0	0.0
14	0.0	0.0	0.0	0.0	0.0
15	0.0	0.0	0.0	0.0	0.0
16	0.0	0.0	0.0	0.0	0.0
17	0.0	0.0	0.0	0.0	0.0
18	0.0	0.0	0.0	0.0	0.0
19	0.0	0.0	0.0	0.0	0.0
>>END_MODULE
