FastQCFastQC Report
Fri 14 Oct 2022
S1.Tombus-like_virus_segment_1.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.Tombus-like_virus_segment_1.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences215
Sequences flagged as poor quality0
Sequence length20-150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGTCCATCTTGTAGGATGACGGAGGAATTTTCTAAGGTGCCTATAACA3214.883720930232558No Hit
CTGCTTCGGTATAATAGGCATATTTCTTACTCAACTTGTGCACTTTT188.372093023255815No Hit
ATTCCATGTAGTCCCCAACGAGAGTATATGTCATACCAAATATGTCAAA177.906976744186046No Hit
TCGAGTAATTGTCAAATCCGGGAACCTAGTTGTGT125.5813953488372094No Hit
CCTGTCGCAAGTATTCCATGTAGTCCCCAACGAGAGTA73.255813953488372No Hit
CACTTTTGCACCAATGTCGAGATGATTGCCCTTTCCA62.7906976744186047No Hit
CTGAGTAGTGAGTTCACCGAAGACACCTTTGTATATGTA62.7906976744186047No Hit
TAGGTCACACTATGGAGTCCACTTACAAGCACTATACGAGG62.7906976744186047No Hit
GAATTATAGACAAGATTGGTACGACAAAA52.3255813953488373No Hit
CTAGTGCTGAGCTTCTCTATCTTGGTGACCA52.3255813953488373No Hit
CCATGTAGTCCCCAACGAGAG31.3953488372093024No Hit
GAATTATAGACAAGATTGGTACGA31.3953488372093024No Hit
AATGTCGAGATGATTGCCCTTCTAA31.3953488372093024No Hit
CGCGGGAATTATAGACAAGACC31.3953488372093024No Hit
CGATTGTGGTTCCGAATAGAC31.3953488372093024No Hit
TTACAAGCACTATACGAGGCATGGTTGGACTCTCCG31.3953488372093024No Hit
AGCTGTGGCGCTATCGTACTC31.3953488372093024No Hit
CGCGACGCTCTCTCAGCTCGA31.3953488372093024No Hit
TGGCTCCTATGTTCTCACGAG20.9302325581395349No Hit
TCTTACTCAACTTGTGCACTTC20.9302325581395349No Hit
ATGTAGTCCCCAACGAGAGTA20.9302325581395349No Hit
GAGTCCATCTTGTAGGATGACGGAGGAATTTTCTAAGGTGCCTATAACAG20.9302325581395349No Hit
ATTTTCCCGATACTTTGGCTC20.9302325581395349No Hit
GCGTGACGGTTGGTGAAGGCAAT20.9302325581395349No Hit
ACGAAGAACAGCGGATTGGCC20.9302325581395349No Hit
CATGTAGTCCCCAACGAGAGT20.9302325581395349No Hit
TCCATGTAGTCCCCAACGAGAG20.9302325581395349No Hit
TCTTGGTGAACGGGGAAACTC20.9302325581395349No Hit
CTCGGCTTCCATTCTCCTCAC20.9302325581395349No Hit
TTTCTAAGGTGCCTATAACAGC10.46511627906976744No Hit
ATGGCTCCTATGTTCTCACGAG10.46511627906976744No Hit
CTCGGCCGCGTATCATTTCAC10.46511627906976744No Hit
TGATTAATGTATCTCTCGAGACC10.46511627906976744No Hit
CGAGGATAGCCGGGAAATACAC10.46511627906976744No Hit
TATTCCATGTAGTCCCCAACGAGAGT10.46511627906976744No Hit
GAGAATATCCAACACCGGCTA10.46511627906976744No Hit
TGCTTCGGTATAATAGGCATATTTCTTACTCAACTTGTGCACTTTT10.46511627906976744No Hit
TGCCCCTATTTTCCCGATACT10.46511627906976744No Hit
GGGGTTTTCCGAGATAGACAG10.46511627906976744No Hit
CAAAGTGTACATCTCTACCCAC10.46511627906976744No Hit
CGGCCGCGTATCATTTCACACC10.46511627906976744No Hit
TTCCATGTAGTCCCCAACGAGAGTATATGTCATACCAAATATGTCA10.46511627906976744No Hit
TGTAGAAAGCATGGTCCTCGG10.46511627906976744No Hit
CGGAGCAACTTGTTATGGTACCA10.46511627906976744No Hit
ATGCTATCATCGCCGTTGACTATAA10.46511627906976744No Hit
AAGATCTGTGGCATGCTGTACC10.46511627906976744No Hit
TTAATGTCAAAATCGAGATTG10.46511627906976744No Hit
GCTATCATCGCCGTTGACTACC10.46511627906976744No Hit
GTAGAAAGCATGGTCCTCGG10.46511627906976744No Hit
GATGCTATCATCGCCGTTGACC10.46511627906976744No Hit
CGAGTCCATCTTGTAGGATGACGGAGGAATTTTCTAAGGTGCCTATAACAGCGTCCAGCTGTGGCGC10.46511627906976744No Hit
TCCCGATACTTTGGCTCCTCA10.46511627906976744No Hit
AGGCATATTTCTTACTCAAC10.46511627906976744No Hit
ATGTCAAACAGCCTCCGAGGA10.46511627906976744No Hit
CCACCAGACAACGGCATCCACCA10.46511627906976744No Hit
CACACTATGGAGTCCACTTACC10.46511627906976744No Hit
CCTGTCGCAAGTATTCCATGTAGTCCCCAACGAGAGT10.46511627906976744No Hit
GATGCTATCATCGCCGTTGACTATAA10.46511627906976744No Hit
AGAGTGATCTGCTTCGGTATAC10.46511627906976744No Hit
TACAAGCACTATACGAGGCATGGTTGGACTCTCCG10.46511627906976744No Hit
GAGTCCATCTTGTAGGATGACGGAGGAATTTTCTAAGGTGCCTATAACAT10.46511627906976744No Hit
TGTCCCTCGCCTGTATCATGCC10.46511627906976744No Hit
CGCAGAGATTGTAGAAAGCAT10.46511627906976744No Hit
CCCGTCGCAAGTATTCCATGTAGTCCCCAACGAGAGTA10.46511627906976744No Hit
TTCCATGTAGTCCCCAACGAGAGTATATGTCATACCAAATATGTCAAA10.46511627906976744No Hit
TCCACCAGACAACGGCATCCACC10.46511627906976744No Hit
ATGGCTCCTATGTTCTCACGA10.46511627906976744No Hit
GTAGAAAGCATGGTCCTCGGC10.46511627906976744No Hit
CTAGTGCTGAGCTTCTCTATCTTGGTGACC10.46511627906976744No Hit
TCACACTATGGAGTCCACTTACAAGCACTATACGAG10.46511627906976744No Hit
CGAGATTGTCTTGGTTCGGTGTAAA10.46511627906976744No Hit
GCACCAATGTCGAGATGATTG10.46511627906976744No Hit
CGATTGTGGTTCCGAATAGACA10.46511627906976744No Hit
GTGTTCCATGTAGTCCCCAACGAGAG10.46511627906976744No Hit
ACCAATGTCGAGATGATTGCCCA10.46511627906976744No Hit
ACAAAACTCGACCTTGTGTACC10.46511627906976744No Hit
TCCAGCTGTGGCGCTATCGTA10.46511627906976744No Hit
GCCATGTCAGTGGGTTCCACC10.46511627906976744No Hit
CGCCTGTCTCATTGCTGCTGC10.46511627906976744No Hit
TCTTGTAGGATGACGGAGGAA10.46511627906976744No Hit
TGTACTTGCAGCCTCTCGATC10.46511627906976744No Hit
CTCAGCTCGATGGCATCCACG10.46511627906976744No Hit
TTTTCCCGATACTTTGGCTCCA10.46511627906976744No Hit
TATCATCGCCGTTGACTATAAA10.46511627906976744No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)