FastQCFastQC Report
Mon 28 Nov 2022
S1_Sudafrica.Tombus-like_virus_segment_2.15-35nt.new.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1_Sudafrica.Tombus-like_virus_segment_2.15-35nt.new.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences383
Sequences flagged as poor quality0
Sequence length20-34
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATGTAACTCAGGGCCACCCA6316.449086161879894No Hit
ATGTAACTCAGGGCCACCCAC143.6553524804177546No Hit
TACGAGAACCCCCTTGATACC123.1331592689295036No Hit
CATGTAACTCAGGGCCACCCAA112.8720626631853787No Hit
CCATGTAACTCAGGGCCACCC92.3498694516971277No Hit
ATGTAACTCAGGGCCACCCACCA71.8276762402088773No Hit
ACGGATGATGACGAGCAAACAAGAGGAGACA61.5665796344647518No Hit
GATGACGAGCAAACAAGAGGAGACAACA51.3054830287206265No Hit
ATGTAACTCAGGGCCACCCACA51.3054830287206265No Hit
TGGTGATCCCTGTGATCACTGCGTCGGACCAAA51.3054830287206265No Hit
GTGCATCACTGTACGGATGATGACGAGCAAACA41.0443864229765014No Hit
CGTCCCATGTAACTCAGGGCCACCCACA41.0443864229765014No Hit
ATGTAACTCAGGGCCACCCA41.0443864229765014No Hit
CCAGAAACTGCTTGCCCCAAT41.0443864229765014No Hit
CATGTAACTCAGGGCCACCC41.0443864229765014No Hit
TAGCGCACTGATAGGTAGAAA41.0443864229765014No Hit
ATGTAACTCAGGGCCACCCACC41.0443864229765014No Hit
TGTCCAGAAACTGCTTGCCCCA41.0443864229765014No Hit
TTATGTGTCCAGAAACTGCTTGCC30.7832898172323759No Hit
CATGTAACTCAGGGCCACCCAC30.7832898172323759No Hit
TGGCACTTACGAGAACCCCCT30.7832898172323759No Hit
CCCATGTAACTCAGGGCCACCCA30.7832898172323759No Hit
AGAATCGCTAGTGCCTCGGGCA30.7832898172323759No Hit
AGACCGATCTGAGTCAGGAAG30.7832898172323759No Hit
ACTAAGTAGCAGGCCGAGGGC30.7832898172323759No Hit
TGTACGGATGATGACGAGCAAACAAGAGGAGACA30.7832898172323759No Hit
TTGGCGGACCATATGACTGC30.7832898172323759No Hit
GTCCAGAAACTGCTTGCCCCAC30.7832898172323759No Hit
ACTATGGGAGGTTCGTCACAC30.7832898172323759No Hit
CGCAGCATACTCCCATTGGACCA30.7832898172323759No Hit
CGGACTCGCTCGCGCTGCTGC30.7832898172323759No Hit
TCCCATGTAACTCAGGGCCACCCA30.7832898172323759No Hit
ACGAGAACCCCCTTGATACCG30.7832898172323759No Hit
GCGAGCAAACCAGTGACCTGAACCTGAAC30.7832898172323759No Hit
GCATCACTGTACGGATGATGACGAGCAAAC30.7832898172323759No Hit
TGTGTCCAGAAACTGCTTGCCA30.7832898172323759No Hit
CGCATATGCCCGTCTCAGTCC30.7832898172323759No Hit
ATTTGGCGGACCATATGACTG30.7832898172323759No Hit
GACCTGAACCTGAACACACTG20.5221932114882507No Hit
TCGAGATGCTGTATGTCATACTT20.5221932114882507No Hit
AGAATCGCTAGTGCCTCGGGC20.5221932114882507No Hit
CGACTTTGTTCGGGCCAGCCAG20.5221932114882507No Hit
ATATTTGGCGGACCATATGAC20.5221932114882507No Hit
CACACCCCGGCGCGGACTCGCA20.5221932114882507No Hit
CCATGTAACTCAGGGCCACCCA20.5221932114882507No Hit
ACCTGAACCTGAACACACTGC20.5221932114882507No Hit
AGAATCGCTAGTGCCTCGGGCC20.5221932114882507No Hit
CCTGAACCTGAACACACTGC20.5221932114882507No Hit
TGTAACTCAGGGCCACCCACA20.5221932114882507No Hit
GGAAGTTGGTGATCCCTGTGAA20.5221932114882507No Hit
CATATGCCCGTCTCAGTCCCCA20.5221932114882507No Hit
TGTCCAGAAACTGCTTGCCCC20.5221932114882507No Hit
TGACCTGAACCTGAACACACT20.5221932114882507No Hit
GCACTGATAGGTAGAAAACAATGAGAGC20.5221932114882507No Hit
ATGTAACTCAGGGCCACCCACCT20.5221932114882507No Hit
CGAGCAAACCAGTGACCTGAA20.5221932114882507No Hit
CACACTGGGTAGATGCGAGCAAA20.5221932114882507No Hit
ACTGTACGGATGATGACGAGCAC20.5221932114882507No Hit
GTAGGCGCGATCGCATCTGGC20.5221932114882507No Hit
ATATGCCCGTCTCAGTCCCCCCA20.5221932114882507No Hit
ATACCGGCGCGGACCACTTGC20.5221932114882507No Hit
AATGAGAGCAGTCGGTATATC20.5221932114882507No Hit
AAGGTTCCATCACGCAGCACA20.5221932114882507No Hit
TGCATCACTGTACGGATGATGACGAGCAAACA20.5221932114882507No Hit
TGAGAGTCAATTCAAGATGCTGTATGTCATATTC20.5221932114882507No Hit
AGATGCGAGCAAACCAGTGACC20.5221932114882507No Hit
TGGATCTGAGAGTCAATTCGAAA20.5221932114882507No Hit
CACTTACGAGAACCCCCTTGATACC20.5221932114882507No Hit
TGTAGCGCACTGATAGGTAGAAA20.5221932114882507No Hit
TTACGAGAACCCCCTTGATACC20.5221932114882507No Hit
CGTCCCTGATCATTCCGCAAG20.5221932114882507No Hit
TGTTCGGGCCAGCCAGCAAGC10.26109660574412535No Hit
CTCCGAACACTAACGCAGCAT10.26109660574412535No Hit
ACTAAGTAGCAGGCCGAGGG10.26109660574412535No Hit
GGTGTAGCGCACTGATAGGTACC10.26109660574412535No Hit
CGCCGAACACTAACGCAGCA10.26109660574412535No Hit
TGGCGGACCATATGACTGCAT10.26109660574412535No Hit
CCAAAGGAGCGCACGGATTGGTA10.26109660574412535No Hit
GTCCAGAAACTGCTTGCCCCA10.26109660574412535No Hit
TGACTTCTAGTGGACACCGGGA10.26109660574412535No Hit
ATTCCGAGTCCGACGCATATG10.26109660574412535No Hit
CCCATGTAACTCAGGGCCACC10.26109660574412535No Hit
ATCATCGCATGCATCCAACACCA10.26109660574412535No Hit
CAGAAACTGCTTGCCCCAATA10.26109660574412535No Hit
TGCGGCTGGGCACCTAGCAGT10.26109660574412535No Hit
TACTAAGTAGCAGGCCGAGGG10.26109660574412535No Hit
AACCTGAACACACTGCATCAAA10.26109660574412535No Hit
CCGGTTTGGATCTTTGGCGACCA10.26109660574412535No Hit
GCACCTAGCAGTTAGGAAAAAGTGAGAAGTATA10.26109660574412535No Hit
CACACCCCGGCGCGGACTCGC10.26109660574412535No Hit
TCCAGAAACTGCTTGCCCCAAC10.26109660574412535No Hit
TCTACTAAGTAGCAGGCCGAG10.26109660574412535No Hit
TGCGAGCAAACCAGTGACCTGAC10.26109660574412535No Hit
ACGGATGATGACGAGCAGACAA10.26109660574412535No Hit
CTTGATTCCGAGTCCGACGCA10.26109660574412535No Hit
CATATGCCCGTCTCAGTCCCCC10.26109660574412535No Hit
TGCCAGGGCGGCCGTAGGCGC10.26109660574412535No Hit
AGAAACTGCTTGCCCCAATA10.26109660574412535No Hit
GGTAGATGCGAGCAAACCAG10.26109660574412535No Hit
CTCTGGCCAGTATCGTGTTG10.26109660574412535No Hit
CGCATATGCCCGTCTCAGTCCA10.26109660574412535No Hit
TCTCATTATATTTGGCGGACCA10.26109660574412535No Hit
TGTAGCGCACTGATAGGTAGAAAACA10.26109660574412535No Hit
GGTAGCGTCCCTGATCATTCC10.26109660574412535No Hit
ATTGTTGTTGGATCTGAGAGT10.26109660574412535No Hit
GTCCAGAAACTGCTTGCCCCAA10.26109660574412535No Hit
TGATTCCGAGTCCGACGCATA10.26109660574412535No Hit
GTACGGATGATGACGAGCAAAC10.26109660574412535No Hit
TGACCTGAACCTGAACACACTC10.26109660574412535No Hit
TGATACATCTTCCAGACCGA10.26109660574412535No Hit
ATGTAACTCAGGGCCACCCACTA10.26109660574412535No Hit
GATGCGAGCAAACCAGTGACCTGATA10.26109660574412535No Hit
ACACTGGGTAGATGCGAGCAAA10.26109660574412535No Hit
TGTAGCGCACTGATAGGTAGAAAAC10.26109660574412535No Hit
TTGCCCCAATAGCCATAGACAC10.26109660574412535No Hit
TAGGTAACTCAGGGCCACCCA10.26109660574412535No Hit
TCCGAGTCCGACGCATATGCCT10.26109660574412535No Hit
GTGACCTGAACCTGAACACACCA10.26109660574412535No Hit
CTATCATCGCATGCATCCAAC10.26109660574412535No Hit
GTGTAGCGCACTGATAGGTAG10.26109660574412535No Hit
CTGGCCAGTATCGTGTTGTC10.26109660574412535No Hit
TGATACCGGCGCGGACCACTAAA10.26109660574412535No Hit
CGGGGCTGACTTCTAGTGGACC10.26109660574412535No Hit
CCAGAAACTGCTTGCCCCAACC10.26109660574412535No Hit
AAACCTCTAGCACTATTTTCCC10.26109660574412535No Hit
CCCATGTAACTCAGGGCCACCC10.26109660574412535No Hit
TCATTATATTTGGCGGACCAT10.26109660574412535No Hit
GATCCTGATGATAGTTGTTGT10.26109660574412535No Hit
CTTCTAGTGGACACCGGGTG10.26109660574412535No Hit
ATATTTGGCGGACCATATGA10.26109660574412535No Hit
GGGGTTGAGGTCGGTTGGTGC10.26109660574412535No Hit
CCATGTAACTCAGGGCCACCCCA10.26109660574412535No Hit
GCAAACCAGTGACCTGAACCT10.26109660574412535No Hit
CATATGCCCGTCTCAGTCCC10.26109660574412535No Hit
ACCCAGAGCGTATGTGTCCA10.26109660574412535No Hit
GAGAACCCCCTTGATACCGGC10.26109660574412535No Hit
TGACTTCTAGTGGACACCGGG10.26109660574412535No Hit
CGGGGCTGACTTCTAGTGGAC10.26109660574412535No Hit
TCATTGTTGTTGGATCTGAG10.26109660574412535No Hit
AGCGCACTGATAGGTAGAAAA10.26109660574412535No Hit
GATGCGAGCAAACCAGTGACC10.26109660574412535No Hit
AAGTATATCCGAAACTTCTAGCACTATT10.26109660574412535No Hit
GAGCAAACCAGTGACCTGAACC10.26109660574412535No Hit
GTAGATGCGAGCAAACCAGTGACCTGT10.26109660574412535No Hit
TGGCACTTACGAGAACCCCCTT10.26109660574412535No Hit
AATTCGAGATGCTGTATGTCA10.26109660574412535No Hit
CCCTGATCATTCCGCAAGTCG10.26109660574412535No Hit
TCCATCACGCAGCACATTCATC10.26109660574412535No Hit
ATCGCACTGATAGGTAGAAA10.26109660574412535No Hit
GCGCACTGATAGGTAGAAAA10.26109660574412535No Hit
CATGTAACTCAGGGCCACCCACA10.26109660574412535No Hit
AGCAAGCGCCGAACACTAACG10.26109660574412535No Hit
AGCCCATTTTGATACATCTTC10.26109660574412535No Hit
GATGTAACTCAGGGCCACCCA10.26109660574412535No Hit
TATTTGGCGGACCATATGACT10.26109660574412535No Hit
GACCGATCTGAGTCAGGAAGT10.26109660574412535No Hit
GCATATGCCCGTCTCAGTCCC10.26109660574412535No Hit
CCGAACACTAACGCAGCATACC10.26109660574412535No Hit
ATGCATCCAACACTTGTAGACCA10.26109660574412535No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)