FastQCFastQC Report
Fri 14 Oct 2022
S1.EVE_segment_M.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.EVE_segment_M.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences413
Sequences flagged as poor quality0
Sequence length11-30
%GC0

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4310.411622276029057No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA4310.411622276029057No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAA368.716707021791766No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAA348.232445520581114No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA317.506053268765134No Hit
AAAAAAAAAAAAAAAAAAAAA245.811138014527845No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAA245.811138014527845No Hit
AAAAAAAAAAAAAAAAAAAAAA215.084745762711865No Hit
AAAAAAAAAAAAAAAAAAAA143.389830508474576No Hit
AAAAAAAAAAAAAAAAAAAAAAAA133.14769975786925No Hit
AAAAAAAAAAAAAAAAAAAAAAA122.9055690072639226No Hit
AAAAAAAAAAAAAAAAAA122.9055690072639226No Hit
AAAAAAAAAAAAAAAAA122.9055690072639226No Hit
AAAAAAAAAAAAAAAA112.663438256658596No Hit
AAAAAAAAAAAAAAAAAAA112.663438256658596No Hit
AAAAAAAAAAAAAAA112.663438256658596No Hit
AAAAAAAAAAA102.4213075060532687No Hit
AAAAAAAAAAAAAA81.937046004842615No Hit
AAAAAAAAAAAA61.4527845036319613No Hit
AAAAAAAAAAAAA61.4527845036319613No Hit
AAAAAAAAAAAAAAAAAAAACA20.48426150121065376No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAA20.48426150121065376No Hit
ANAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.48426150121065376No Hit
CGGAAAAAAAAAAAAAAAAAAAAAAAAA20.48426150121065376No Hit
AGTAAAAAAAAAAAAAAAAAAAAA20.48426150121065376No Hit
TGTAAAAAAAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
CTAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
TATTAAAAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
GAGAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
AAACAAAAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
CAAAAAAAAAAAAAA10.24213075060532688No Hit
GGAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
CCAAAAAAAAAAAAAAA10.24213075060532688No Hit
AAAAAAAAAAAAAAAAAAAAAAAACC10.24213075060532688No Hit
GGTAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
AAACAGGCTGCCA10.24213075060532688No Hit
TAAAAAAAAAAA10.24213075060532688No Hit
TGTAAAAAAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
AAAAAAAAAAAAAAAAAAAAACA10.24213075060532688No Hit
GGTAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
AGTAAAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit
TAACAGGCTGCCA10.24213075060532688No Hit
ANAAAAAAAAAAAAAAAA10.24213075060532688No Hit
TTAAAAAAAAAAAAAAAAAAAAAA10.24213075060532688No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)