FastQCFastQC Report
Fri 14 Oct 2022
S1.EVE_totivirus.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.EVE_totivirus.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length11-20
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTAACGGCCTGCCCA735.0No Hit
CCTGGGGCTGAA420.0No Hit
GTTTAACGGCCTGCCC210.0No Hit
AACCGGCTGTGAA15.0No Hit
GCCGGGCTATC15.0No Hit
TCGGGGCCCAC15.0No Hit
CGCGTCCCTGTCAAA15.0No Hit
TGTCCCGGCGGC15.0No Hit
AATCCGCCGATCCGTCCAAC15.0No Hit
AGTCCCGGCGG15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)