FastQCFastQC Report
Fri 14 Oct 2022
S1.EVE_totivirus.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.EVE_totivirus.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95
Sequences flagged as poor quality0
Sequence length11-53
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCAGGCAAAGCTCCACCCGATGTACGGAGGCACATCCCTCTCTCCTTAAA2324.210526315789473No Hit
AGAGCAATCGCTGATGGGAATCCTGTAGTGTGGCTAGGGGAA1616.842105263157894No Hit
AGGAAACTGGCAAAGATTGATGCCTTGGCGTGCGTACCGCG1414.736842105263156No Hit
CTGGAACAAAGAAACCCGCACCACTCCTCGAGAA99.473684210526317No Hit
CACTGGAACAAAGAAACCCGCACCACTCCTCGAGATCA77.368421052631578No Hit
CACTGGAACAAAGAAACCCGCACCACAAAA77.368421052631578No Hit
GACGCAGATTTTGCTGCACAGAACTTGCCGGTCGCCTTCC77.368421052631578No Hit
ATTGCAGGCAAAGCTCCACCCGATGTA44.2105263157894735No Hit
AGGATGGCCGAG44.2105263157894735No Hit
GCCAGATCTGCCAC11.0526315789473684No Hit
TGGCTGATAAA11.0526315789473684No Hit
CACTGGAACAAAGAAACCCGCACCACTAAAAA11.0526315789473684No Hit
AGGAGGAGGAT11.0526315789473684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)