FastQCFastQC Report
Fri 14 Oct 2022
S1.Sobemovirus_Segment_1.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.Sobemovirus_Segment_1.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50
Sequences flagged as poor quality0
Sequence length11-23
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCACGGTCCC48.0No Hit
TACAGAGAACCGTCCGACAAC36.0No Hit
CCGCAAAAACTCCTCCGCCCGC36.0No Hit
TCCGCAGCCGCTGTACCCACC24.0No Hit
GCCTGGATCCTCTGAGGGGG24.0No Hit
ACAGAGAACCGTCCGACAACA24.0No Hit
GAGGGCCACGC24.0No Hit
CGCCGGACGACC24.0No Hit
CCCCCGTGGTGAC24.0No Hit
TCTCCGGTAGACCATGCAGCCC24.0No Hit
TTGCCCTCAAGAACAATCTCCT24.0No Hit
AACGCCTGCTCCAGTAACGCCC12.0No Hit
TATCCGCAGCCGCTGTACCCA12.0No Hit
ACACACAGCCGGATTTCATGA12.0No Hit
GCACGGTCCCA12.0No Hit
GCTCCGGACTCACGCCCATC12.0No Hit
TTGCGACCTCGACCCG12.0No Hit
AATGCCGCAAG12.0No Hit
TTGCGACCTCGACCCGTTCAC12.0No Hit
CCGTTCTTCCGCGCCTCGGAC12.0No Hit
CAGAGAACCGTCCGACAACAT12.0No Hit
GAGAACCGTCCGACAAC12.0No Hit
GCCTTCGTAAATGAC12.0No Hit
TACAGAGAACCGTCCGACAA12.0No Hit
GCTCCGGACTCACG12.0No Hit
AGAGAACCGTCCGAC12.0No Hit
TCCGACACTGCTGCTTCCGAGTC12.0No Hit
AATGACGGAGCCAAACAGAGC12.0No Hit
CACACATTCGCGTCCGACCGA12.0No Hit
TTGCGACCTCGACCCGT12.0No Hit
TCACTAGCGCCACCTGC12.0No Hit
GCTCCGGACTCACGC12.0No Hit
AAGAATTCGCGCG12.0No Hit
AAGGTGCCGTCCAATC12.0No Hit
TCCGGACCAATGAGGTAATCAT12.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)