FastQCFastQC Report
Fri 14 Oct 2022
S1.Sobemovirus_segmet_2.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.Sobemovirus_segmet_2.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100
Sequences flagged as poor quality0
Sequence length11-149
%GC59

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGGCGCGTC1010.0No Hit
AGAGCCCATGAATCTGATCACC44.0No Hit
AGAGCCCATGAATCTGATCACCA44.0No Hit
GAAGACATCGCCCTCCACTCC44.0No Hit
TCGCGCCGCTC44.0No Hit
ACCGAAATCGTGAACTCAGAA33.0No Hit
TCGAGCGCGCCA33.0No Hit
AAAGAGACCGTAAAAG33.0No Hit
ACTCCTGCTGCACCAAG22.0No Hit
TTCGCGCCGCTC22.0No Hit
TCTTCCTCTTGCGCGCCTTCC22.0No Hit
ACCACTGGCGCGTCTGCAACC22.0No Hit
CGACTGTCACCGACGCCA22.0No Hit
GTCTCGGCCAGG22.0No Hit
AACTGGCGCGTC22.0No Hit
GAAAAGAGACCGTAAAAGAGC22.0No Hit
CGAAAAGAGACCGTAAAAGAGC22.0No Hit
CTGTGAGATCGAAATCC22.0No Hit
CATTCTTCCTCTTGCGCGCCT22.0No Hit
CCATTCTTCCTCTTGCGCGCC22.0No Hit
CAGGCAGAGGGTCAAACACGA22.0No Hit
ATTCGCGCCGCTC11.0No Hit
GCTGGCTCGTGTAC11.0No Hit
CTCCCAGACGATCGCACCCG11.0No Hit
AAGAGAAGAGACTAGA11.0No Hit
AAGAGCCCATGAATCTGATCA11.0No Hit
GCAGAGGGTCAAACACGAGAC11.0No Hit
GACACCCCCTTCAGAAAA11.0No Hit
ATCGCGGGCCCATTCTTCCTC11.0No Hit
TATGGCCCCCCCTCGGATTCAC11.0No Hit
CGGCGTTTCCCCCTCCCAGAC11.0No Hit
TCGAAATCCCAGTCAACACCG11.0No Hit
CCATTCTTCCTCTTGCGCGCCA11.0No Hit
ATGGCCCCCCCTCGGATTCAT11.0No Hit
CTCACGCGACACGGGGCCCATC11.0No Hit
TAGGCATGGCGAAG11.0No Hit
TTCTTCCTCTTGCGCGCC11.0No Hit
ATTCGCGCCGCT11.0No Hit
AATATGGCCCCCCCTCGGATT11.0No Hit
ATCGCGGGCCCATTCTTC11.0No Hit
TAAGGCGGCCA11.0No Hit
CTCACCCGCTC11.0No Hit
ATACCACTGGCGCGTCTGCAA11.0No Hit
GCGTCTGCAACCTCTCCCTACCA11.0No Hit
CCCTCACGCGAAACGGGGCCCATCGCGGGCCCATTCTTCCTCTTGCGCGC11.0No Hit
TCTCAACCACCGCGTATCCAC11.0No Hit
CTATGAACTCCTGCTGCACCA11.0No Hit
GAGCCCATGAATCTGATCACACG11.0No Hit
AGAGCCCATGAATCTGATCACA11.0No Hit
CGGCGTTTCCCCCTCCCAGACC11.0No Hit
AAAAGAGACCGTAAAAGA11.0No Hit
AGAGGAGAAGACATCGCC11.0No Hit
AAGAGACCGTAAAAGAGCCCA11.0No Hit
CTTGGAGGGCCCCGGCAGCGC11.0No Hit
GGTGTTAAGGCGGCC11.0No Hit
ACTGGCGCGTCTGCAAC11.0No Hit
CGCGGGCCCATT11.0No Hit
CCGAAGAGGAGAAGACATCGCC11.0No Hit
TATCCTCTGAAGACTC11.0No Hit
GTGAGATCGAAATCCC11.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)