FastQCFastQC Report
Fri 14 Oct 2022
S1.Tombus-like_2_monopartite.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.Tombus-like_2_monopartite.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133
Sequences flagged as poor quality0
Sequence length11-38
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCTCGATGTGACTGGCCCGG2015.037593984962406No Hit
TGCTTTTCAGCTTTGCACATCGGTGTGTATTCGACTTG129.022556390977442No Hit
CAATATCCGAAATTGTATGACTAGTTGGGAA75.263157894736842No Hit
TCTCGATGTGACTGGCCCGGC64.511278195488721No Hit
CTTGTATTTGGTGGCACTCATTT43.007518796992481No Hit
TTTTGGCTGCTTGCAGGAGAA43.007518796992481No Hit
TGGTCCGTAGTCTCCCTGAGC43.007518796992481No Hit
GCATCCGCATGTTTTTTGGCT32.2556390977443606No Hit
TATCCGAAATTGTATGACTAGTT32.2556390977443606No Hit
CGACTGTGACGTGGGCATCGAA21.5037593984962405No Hit
CTCGATGTGACTGGCCCGGCG21.5037593984962405No Hit
TTGCGGGTAGGTAACA21.5037593984962405No Hit
ATTCACTATTCCTGTCCTTTG21.5037593984962405No Hit
ATTTTATAGGTCATGC21.5037593984962405No Hit
CTTGCAGGAGAAGAATGGTGCC21.5037593984962405No Hit
TCTTCAAACTGACGGCCCATG21.5037593984962405No Hit
TATCTGAGAGCCTCGACTGTGACGTAAA21.5037593984962405No Hit
GCCGTCGTTGTCGAGTCGTACCA21.5037593984962405No Hit
TCCGAAATTGTATGACTAGTT21.5037593984962405No Hit
GTCCTTTGTGTAGGTGTGGTGTTCCAAT21.5037593984962405No Hit
TCTCGCGACCCATGC21.5037593984962405No Hit
GAAATATCTGAGAGCCTCGACA21.5037593984962405No Hit
ATTCTCGCGACCCATGC21.5037593984962405No Hit
TCAAACTGACGGCCCATGGTG21.5037593984962405No Hit
GCCTGCTATCGCTAGACA10.7518796992481203No Hit
CGGGCGGGGGCA10.7518796992481203No Hit
CAATTTCTTTGTGTAGCGGCCA10.7518796992481203No Hit
GGTGATGTCTCCTGAGTTGAC10.7518796992481203No Hit
TTTCTCGATGTGACTGGCCCG10.7518796992481203No Hit
ACACAGAGTCCAGGATGTAGC10.7518796992481203No Hit
TTCTCGCGACCCATGC10.7518796992481203No Hit
GTATGTGGTCCGTAGTCTCCC10.7518796992481203No Hit
TCCGTAGTCTCCCTGAG10.7518796992481203No Hit
CGGCCTAGCTCCATGTTAAAG10.7518796992481203No Hit
AGGCAATAGAATTTTGGGTGGGA10.7518796992481203No Hit
CTCGCGACCCATGC10.7518796992481203No Hit
TCCAAGCCATCCTGCCCGTACC10.7518796992481203No Hit
CAGCCTCCTGAAGATGCACTC10.7518796992481203No Hit
TAGTGTATGGAGTGTCTATTC10.7518796992481203No Hit
GATCTCATATTTGTTGGTGTA10.7518796992481203No Hit
TTCAAACTGACGGCCCA10.7518796992481203No Hit
TATCCTATTCTGTTCCGGGCG10.7518796992481203No Hit
CGGGCGGGGGC10.7518796992481203No Hit
CAATATCCGAAATTGTATGACTAGTT10.7518796992481203No Hit
CGACTTCATGTATGTCCTCACCT10.7518796992481203No Hit
CGATCTCAGTCCAGTATCCGA10.7518796992481203No Hit
CGTCCCCGTTG10.7518796992481203No Hit
AATATCTGAGAGCCTCGACTG10.7518796992481203No Hit
CAAGGACAGACATTGGCATGCAA10.7518796992481203No Hit
TCGTGTAAGTTTGGGATGAGCA10.7518796992481203No Hit
CCATCACTACAGAGTCGTCCC10.7518796992481203No Hit
AGTCTCCTCGAGCGCGTCCAC10.7518796992481203No Hit
ATATCCGAAATTGTATGACTA10.7518796992481203No Hit
CAAGGACAGACATTGGCATGC10.7518796992481203No Hit
GTCCTGGACTGCGTCGAAAA10.7518796992481203No Hit
TCCTGGACTGCGTCGAAAAA10.7518796992481203No Hit
AGCGGCCTAGC10.7518796992481203No Hit
CTGTGGAAATATCTGAGAGCC10.7518796992481203No Hit
AGGCAATAGAATTTTGGGTGG10.7518796992481203No Hit
CTCCCCGTTGAC10.7518796992481203No Hit
CTTCTAGGATTGTGGGCTTGTGTCGTCCAA10.7518796992481203No Hit
GATGTGACTGGCCCGGCGTTG10.7518796992481203No Hit
GGAAAACACAGAGTCCAGGACCA10.7518796992481203No Hit
CGATGTGACTGGCCCGGCG10.7518796992481203No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)