FastQCFastQC Report
Fri 14 Oct 2022
S1.Tombus-like_virus_segment_1.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS1.Tombus-like_virus_segment_1.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241
Sequences flagged as poor quality0
Sequence length11-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGTCCATCTTGTAGGATGACGGAGGAATTTTCTAAGGTGCCTATAACA3414.107883817427386No Hit
ATTCCATGTAGTCCCCAACGAGAGTATATGTCATACCAAATATGTCAAA197.883817427385892No Hit
CTGCTTCGGTATAATAGGCATATTTCTTACTCAACTTGTGCACTTTT197.883817427385892No Hit
TCGAGTAATTGTCAAATCCGGGAACCTAGTTGTGT124.979253112033195No Hit
CCTGTCGCAAGTATTCCATGTAGTCCCCAACGAGAGTA93.7344398340248963No Hit
CTAGTGCTGAGCTTCTCTATCTTGGTGACCA72.904564315352697No Hit
CACTTTTGCACCAATGTCGAGATGATTGCCCTTTCCA62.4896265560165975No Hit
CTGAGTAGTGAGTTCACCGAAGACACCTTTGTATATGTA62.4896265560165975No Hit
TAGGTCACACTATGGAGTCCACTTACAAGCACTATACGAGG62.4896265560165975No Hit
GAATTATAGACAAGATTGGTACGACAAAA52.0746887966804977No Hit
AATGTCGAGATGATTGCCCTTCTAA41.6597510373443984No Hit
TTACAAGCACTATACGAGGCATGGTTGGACTCTCCG41.6597510373443984No Hit
ATCACCTGTCGCAAGT41.6597510373443984No Hit
TGTAGAAAGCATGGTCCTCGG31.2448132780082988No Hit
CCATGTAGTCCCCAACGAGAG31.2448132780082988No Hit
GAATTATAGACAAGATTGGTACGA31.2448132780082988No Hit
CGCGGGAATTATAGACAAGACC31.2448132780082988No Hit
CGATTGTGGTTCCGAATAGAC31.2448132780082988No Hit
AGCTGTGGCGCTATCGTACTC31.2448132780082988No Hit
CGCGACGCTCTCTCAGCTCGA31.2448132780082988No Hit
TGGCTCCTATGTTCTCACGAG20.8298755186721992No Hit
TCTTACTCAACTTGTGCACTTC20.8298755186721992No Hit
ATGTAGTCCCCAACGAGAGTA20.8298755186721992No Hit
GAGGCCCGGGTTG20.8298755186721992No Hit
ATTTTCCCGATACTTTGGCTC20.8298755186721992No Hit
GCGTGACGGTTGGTGAAGGCAAT20.8298755186721992No Hit
ACGAAGAACAGCGGATTGGCC20.8298755186721992No Hit
GATGCTATCATCGCCGTTGACTATAA20.8298755186721992No Hit
CATGTAGTCCCCAACGAGAGT20.8298755186721992No Hit
GAGGCCCGGGT20.8298755186721992No Hit
TCCATGTAGTCCCCAACGAGAG20.8298755186721992No Hit
CGCGGGAATTATAGACAAGAT20.8298755186721992No Hit
TCTTGGTGAACGGGGAAACTC20.8298755186721992No Hit
CTCGGCTTCCATTCTCCTCAC20.8298755186721992No Hit
TTTCTAAGGTGCCTATAACAGC10.4149377593360996No Hit
ATGGCTCCTATGTTCTCACGAG10.4149377593360996No Hit
CTCGGCCGCGTATCATTTCAC10.4149377593360996No Hit
TGATTAATGTATCTCTCGAGACC10.4149377593360996No Hit
CGAGGATAGCCGGGAAATACAC10.4149377593360996No Hit
TATTCCATGTAGTCCCCAACGAGAGT10.4149377593360996No Hit
GAGAATATCCAACACCGGCTA10.4149377593360996No Hit
TGCCCCTATTTTCCCGATACT10.4149377593360996No Hit
GGGGTTTTCCGAGATAGACAG10.4149377593360996No Hit
CAAAGTGTACATCTCTACCCAC10.4149377593360996No Hit
CGGCCGCGTATCATTTCACACC10.4149377593360996No Hit
TTCGATTCCCCGC10.4149377593360996No Hit
AGCGACGCTCTC10.4149377593360996No Hit
CGGAGCAACTTGTTATGGTACCA10.4149377593360996No Hit
CCCGGGTTGCCC10.4149377593360996No Hit
TCCATGTAGTCCCCAACGAGA10.4149377593360996No Hit
AAGATCTGTGGCATGCTGTACC10.4149377593360996No Hit
CAGCCGTAGGTCACAC10.4149377593360996No Hit
TTAATGTCAAAATCGAGATTG10.4149377593360996No Hit
CTGTCGCAAGTATTCCATGTAGTCCCCA10.4149377593360996No Hit
TAGGTCACACTATGGAGTCCACTTACAAGCACTATACGAGT10.4149377593360996No Hit
GCTATCATCGCCGTTGACTACC10.4149377593360996No Hit
GATGCTATCATCGCCGTTGACC10.4149377593360996No Hit
GGGAGGCCCGGGTTG10.4149377593360996No Hit
TCCCGATACTTTGGCTCCTCA10.4149377593360996No Hit
AGGCATATTTCTTACTCAAC10.4149377593360996No Hit
ATGTCAAACAGCCTCCGAGGA10.4149377593360996No Hit
CCACCAGACAACGGCATCCACCA10.4149377593360996No Hit
CACACTATGGAGTCCACTTACC10.4149377593360996No Hit
AGAGTGATCTGCTTCGGTATAC10.4149377593360996No Hit
GAAGTTCGGGAGGCC10.4149377593360996No Hit
TGTCCCTCGCCTGTATCATGCC10.4149377593360996No Hit
GGGAGGCCCGGGT10.4149377593360996No Hit
CGCAGAGATTGTAGAAAGCAT10.4149377593360996No Hit
GATTGGACTCTCCGCAGA10.4149377593360996No Hit
CCCGTCGCAAGTATTCCATGTAGTCCCCAACGAGAGTA10.4149377593360996No Hit
TCCACCAGACAACGGCATCCACC10.4149377593360996No Hit
ATGGCTCCTATGTTCTCACGA10.4149377593360996No Hit
TGGACTCTCCG10.4149377593360996No Hit
GTAGAAAGCATGGTCCTCGGC10.4149377593360996No Hit
CGAGATTGTCTTGGTTCGGTGTAAA10.4149377593360996No Hit
GCACCAATGTCGAGATGATTG10.4149377593360996No Hit
CGATTGTGGTTCCGAATAGACA10.4149377593360996No Hit
GTGTTCCATGTAGTCCCCAACGAGAG10.4149377593360996No Hit
ACCAATGTCGAGATGATTGCCCA10.4149377593360996No Hit
ACAAAACTCGACCTTGTGTACC10.4149377593360996No Hit
TCCAGCTGTGGCGCTATCGTA10.4149377593360996No Hit
TGGTTGGTTGCCCGCGACTTC10.4149377593360996No Hit
GCCATGTCAGTGGGTTCCACC10.4149377593360996No Hit
CCGGGAGGCCCG10.4149377593360996No Hit
CGCCTGTCTCATTGCTGCTGC10.4149377593360996No Hit
TCTTGTAGGATGACGGAGGAA10.4149377593360996No Hit
TGTACTTGCAGCCTCTCGATC10.4149377593360996No Hit
CTCAGCTCGATGGCATCCACG10.4149377593360996No Hit
TTTTCCCGATACTTTGGCTCCA10.4149377593360996No Hit
AGGCCCGGGTT10.4149377593360996No Hit
TATCATCGCCGTTGACTATAAA10.4149377593360996No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)