arrested.1 arrested.2 arrested.3 arrested.4 proliferative.1 proliferative.2 proliferative.3 proliferative.4 prunned.1 prunned.2 prunned.3 prunned.4 reactivated.1 reactivated.2 reactivated.3 annotation AtOrt Solyc00g500001.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc00g500002.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VBY8_9ASPA) Solyc00g500003.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MP domain-containing protein (AHRD V3.3 *-* A0A1Q3D0H5_CEPFO) Solyc00g500004.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500006.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500007.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500008.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500009.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500011.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500012.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500013.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500014.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500016.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500017.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500018.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g014290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g005280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 no_annotation_available Solyc00g500019.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf4 (AHRD V3.3 *** K4EQH2_DATST) ATCG00520 Solyc00g500020.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Cytochrome f (AHRD V3.3 *** A0A2G3ALJ3_CAPAN) ATCG00540 Solyc00g500021.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Cytochrome b559 subunit alpha (AHRD V3.3 *** S8D1L1_9LAMI) ATCG00580 Solyc00g500022.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S18, chloroplastic (AHRD V3.3 *** A0A1U8QD82_CAPAN) ATCG00650 Solyc00g180440.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 50S ribosomal protein L20, chloroplastic (AHRD V3.3 *** A0A1Z2RRT5_9ERIC) ATCG00660 Solyc00g500023.1 47 28 81 58 50 61 50 31 27 20 67 35 60 78 90 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** CLPP_SOLTU) ATCG00670 Solyc00g500024.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP47 reaction center protein (AHRD V3.3 *** A0A1U8QCF6_CAPAN) ATCG00680 Solyc00g500025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500026.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein H (AHRD V3.3 *** I6N985_DATST) ATCG00710 Solyc00g500027.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b6 (AHRD V3.3 *** A0A125RTD6_9ASTR) ATCG00720 Solyc00g500028.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b6-f complex subunit 4 (AHRD V3.3 *** A0A2G2XBM1_CAPBA) Solyc00g500029.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** I6N946_DATST) Solyc00g500030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S11, chloroplastic (AHRD V3.3 *** G9FCH9_9LAMI) ATCG00750 Solyc00g500031.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L14, chloroplastic (AHRD V3.3 *** I6N992_DATST) ATCG00770 Solyc00g500032.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L16, chloroplastic (AHRD V3.3 *-* A0A2G3BL23_CAPCH) ATCG00790 Solyc00g500033.1 0 0 0 0 0 0 0 0 1 1 0 2 0 0 0 Ribosomal protein L2, plastid (AHRD V3.3 *-* A0A2U1PJW3_ARTAN) Solyc00g500034.1 0 1 1 1 0 1 1 0 0 0 1 0 1 0 0 30S ribosomal protein S3, chloroplastic (AHRD V3.3 *** I6N994_DATST) ATCG00800 Solyc00g500035.1 0 3 0 2 0 1 0 0 1 0 0 0 0 3 0 50S ribosomal protein L2 (AHRD V3.3 *** H6T990_9CARY) Solyc00g500036.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 (AHRD V3.3 *-* A0A346JLD3_9ASTE) Solyc00g500037.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *** A0A1Z1GA65_LITCN) ATCG01280 Solyc00g500038.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 protein (AHRD V3.3 *-* J7H9P3_CAPAN) Solyc00g500039.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 (AHRD V3.3 *-* A0A346JLD3_9ASTE) Solyc00g500040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* K4EQH9_DATST) Solyc00g500041.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *** A0A2G2XBN0_CAPBA) ATCG01100 Solyc00g500042.1 5 13 28 23 26 29 26 12 10 2 35 8 9 9 23 Protein TIC 214 (AHRD V3.3 *** TI214_SOLTU) ATCG01130 Solyc00g500043.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) ATCG01000 Solyc00g500044.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** I6N946_DATST) Solyc00g500045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 protein (AHRD V3.3 *-* J7H9P3_CAPAN) Solyc00g500046.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *** A0A1Z1GA65_LITCN) ATCG01280 Solyc00g500047.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 50S ribosomal protein L2, chloroplastic (AHRD V3.3 *** A0A1C8V6E3_9ROSI) ATCG01310 Solyc00g277510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *-* A0A1U8QBZ9_CAPAN) Solyc00g500048.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase K (AHRD V3.3 *** A0A2G3DGH8_CAPCH) ATCG00040 Solyc00g500049.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Photosystem II reaction center protein K (AHRD V3.3 *** A0A1U8QD48_CAPAN) ATCG00070 Solyc00g500050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *** I6N942_DATST) ATCG00120 Solyc00g500051.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** I6N946_DATST) ATCG00160 Solyc00g500052.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A1U8QCC7_CAPAN) Solyc00g500053.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* I6N949_DATST) Solyc00g500054.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *** A0A078EKT7_BRANA) ATCG00280 Solyc00g500055.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 30S ribosomal protein S14, chloroplastic (AHRD V3.3 *-* A0A2G2X601_CAPBA) ATCG00330 Solyc00g500056.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *-* A0A1U8QD90_CAPAN) ATCG00340 Solyc00g500057.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *** K4EPK3_DATST) ATCG00350 Solyc00g500058.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf3 (AHRD V3.3 *** A0A140F954_9LAMI) ATCG00360 Solyc00g500059.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf3 (AHRD V3.3 *-* A0A1S5SJS5_ORYVI) Solyc00g500060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S4, chloroplastic (AHRD V3.3 *** I6N958_DATST) ATCG00380 Solyc00g500061.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf4 (AHRD V3.3 *** K4EQH2_DATST) ATCG00420 Solyc00g500062.1 13 11 28 11 71 47 25 45 20 21 39 14 17 20 9 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic (AHRD V3.3 *** A0A1U8QCE3_CAPAN) ATCG00430 Solyc00g500063.1 155 95 647 238 706 482 274 136 178 123 852 145 256 157 701 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *** A0A2G2Z7Q2_CAPAN) ATCG00490 Solyc00g500064.1 3363 6395 8022 6088 8358 7591 7587 7608 10448 5589 5814 6187 4642 5988 6243 Ycf15 (AHRD V3.3 *-* A0A346JLD3_9ASTE) ATCG00480 Solyc00g500065.1 9 6 7 1 19 11 14 9 3 4 3 5 9 1 14 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (AHRD V3.3 *** ACCD_SOLLC) ATCG00500 Solyc00g500066.1 0 4 0 4 11 1 0 1 0 0 0 3 5 5 0 Photosystem I assembly protein Ycf4 (AHRD V3.3 *** K4EQH2_DATST) ATCG00520 Solyc00g500067.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic (AHRD V3.3 *** A0A1U8QCE3_CAPAN) ATCG00540 Solyc00g500068.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b559 subunit alpha (AHRD V3.3 *** S8D1L1_9LAMI) ATCG00580 Solyc00g500069.1 1 0 0 0 0 1 5 5 1 5 0 7 0 0 0 30S ribosomal protein S12, chloroplastic (AHRD V3.3 *** A0A2S1JZH6_9APIA) Solyc00g500070.1 0 0 8 1 1 0 0 0 0 0 1 0 0 0 0 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** CLPP_SOLTU) ATCG00670 Solyc00g500071.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *** A0A078EKT7_BRANA) ATCG00680 Solyc00g500072.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 (AHRD V3.3 *-* A0A346JLD3_9ASTE) ATCG00710 Solyc00g500073.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b559 subunit alpha (AHRD V3.3 *** S8D1L1_9LAMI) Solyc00g500074.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *-* A0A1U8QD90_CAPAN) Solyc00g500075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S11, chloroplastic (AHRD V3.3 *** G9FCH9_9LAMI) ATCG00750 Solyc00g500076.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 50S ribosomal protein L14, chloroplastic (AHRD V3.3 *** I6N992_DATST) ATCG00770 Solyc00g500077.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 50S ribosomal protein L16, chloroplastic (AHRD V3.3 *-* A0A2G3BL23_CAPCH) ATCG00790 Solyc00g500078.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L2, plastid (AHRD V3.3 *-* A0A2U1PJW3_ARTAN) Solyc00g500079.1 0 0 0 0 0 1 1 0 0 0 1 0 2 0 0 50S ribosomal protein L2 (AHRD V3.3 *** H6T990_9CARY) Solyc00g500080.1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf4 (AHRD V3.3 *** K4EQH2_DATST) Solyc00g500081.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *** A0A1Z1GA65_LITCN) ATCG01280 Solyc00g500082.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S11, chloroplastic (AHRD V3.3 *** G9FCH9_9LAMI) Solyc00g500083.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 (AHRD V3.3 *-* A0A346JLD3_9ASTE) Solyc00g500084.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *** K4EQH9_DATST) ATCG01000 Solyc00g500085.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis protein CcsA (AHRD V3.3 *** A0A1U8QCK2_CAPAN) ATCG01040 Solyc00g500086.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf3 (AHRD V3.3 *** A0A140F954_9LAMI) ATCG01100 Solyc00g500087.1 3 1 1 0 1 0 0 0 1 0 1 0 0 1 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *** A0A1U8QCJ3_CAPAN) ATCG01110 Solyc00g500088.1 13 12 64 26 27 49 28 21 18 11 55 21 23 20 45 Protein TIC 214 (AHRD V3.3 *** TI214_SOLTU) Solyc00g500089.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MP domain-containing protein (AHRD V3.3 *** A0A1Q3CUC2_CEPFO) Solyc00g500091.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G3CLG0_CAPCH) AT5G37930 Solyc00g011670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g011660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3DFU3_CEPFO) AT5G18000 Solyc00g500092.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *** A0A2K3PAY3_TRIPR) AT5G18000 Solyc00g500093.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3DFU3_CEPFO) Solyc00g500094.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc00g500095.1 78 61 128 16 0 1 1 0 3 14 229 6 17 38 90 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G2VZP0_CAPBA) Solyc00g500096.1 2 1 5 5 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G2WYW6_CAPBA) AT5G37930 Solyc00g011560.1 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase (AHRD V3.3 *-* A0A2G3CLG0_CAPCH) AT5G37930 Solyc00g500097.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein At1g49475-like (AHRD V3.3 *-* XP_025886111.1) Solyc00g500098.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *** A0A0C5ARN6_HYONI) Solyc00g500099.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome C oxidase subunit II-like%2C transmembrane domain-containing protein (AHRD V3.3 *** ATMG01280.1) AT2G07695 Solyc00g500100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *** A0A290WKX3_SOLLC) ATMG00090 Solyc00g500101.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A0C5B2A3_HYONI) Solyc00g500102.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A0C5B2A3_HYONI) Solyc00g153980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g309530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g164580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g210860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g025400.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g022070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g022080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g022090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g022100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L10 (AHRD V3.3 *** E0D3E6_SOLLC) Solyc00g500103.1 0 0 4 0 1 1 1 2 0 0 1 0 2 2 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *-* A0A0C5ARN6_HYONI) ATMG00560 Solyc00g072800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500104.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc00g500105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein (AHRD V3.3 *-* A0A1P8B2M8_ARATH) AT2G07674 Solyc00g500106.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pyruvate, phosphate dikinase (AHRD V3.3 *-* A0A2U1QB44_ARTAN) Solyc00g500107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidase S10, serine carboxypeptidase, Alpha/Beta hydrolase fold protein (AHRD V3.3 *-* A0A2U1LQP4_ARTAN) Solyc00g500108.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc00g281110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500109.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 5 (AHRD V3.3 *-* A0A0C5B7L0_9SOLA) Solyc00g500112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *-* A0A0C5ARN6_HYONI) Solyc00g142160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc00g142170.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc00g500113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S13 (AHRD V3.3 *** K4D8U2_SOLLC) Solyc00g500114.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein (AHRD V3.3 *** Q3EC50_ARATH) AT2G07674 Solyc00g500115.1 0 0 0 1 0 0 0 0 1 0 0 0 6 0 0 NADH-ubiquinone oxidoreductase chain 3 (AHRD V3.3 *** A0A2G2V3C2_CAPBA) AT2G07751 Solyc00g500116.1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 Cytochrome C oxidase subunit II-like%2C transmembrane domain-containing protein (AHRD V3.3 *** ATMG01280.1) AT2G07695 Solyc00g500117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *** A0A290WKX3_SOLLC) ATMG00090 Solyc00g500118.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *** A0A2G2X686_CAPBA) Solyc00g500119.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A0C5B2A3_HYONI) Solyc00g500120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g015600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g007330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger transcription factor 1 Solyc00g007340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g007350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger CCCH domain-containing protein 30-like (AHRD V3.3 *-* A0A2I4HEV8_9ROSI) Solyc00g500123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *** A0A2G2XBN0_CAPBA) ATCG01100 Solyc00g500124.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *** A0A1U8QCJ3_CAPAN) ATCG01110 Solyc00g500125.1 3 0 1 2 1 2 0 1 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *** TI214_SOLTU) ATCG01130 Solyc00g500126.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) ATCG01000 Solyc00g500127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L14, chloroplastic (AHRD V3.3 *** I6N992_DATST) Solyc00g500128.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S14, chloroplastic (AHRD V3.3 *-* A0A2G2X601_CAPBA) ATCG01280 Solyc00g500129.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L2, plastid (AHRD V3.3 *-* A0A2U1PJW3_ARTAN) Solyc00g500130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *** A0A1U8QBZ9_CAPAN) ATCG00020 Solyc00g500131.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase K (AHRD V3.3 *** A0A2G3DGH8_CAPCH) ATCG00040 Solyc00g500132.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein K (AHRD V3.3 *** A0A1U8QD48_CAPAN) ATCG00070 Solyc00g500133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *** I6N942_DATST) ATCG00120 Solyc00g500134.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** I6N946_DATST) ATCG00160 Solyc00g500135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A1U8QCC7_CAPAN) Solyc00g500136.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *** A0A078EKT7_BRANA) ATCG00280 Solyc00g500137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S14, chloroplastic (AHRD V3.3 *-* A0A2G2X601_CAPBA) ATCG00330 Solyc00g500138.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L14, chloroplastic (AHRD V3.3 *** I6N992_DATST) ATCG00340 Solyc00g500139.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *** K4EPK3_DATST) ATCG00350 Solyc00g500140.1 0 1 19 5 3 9 6 3 2 4 16 3 4 4 6 ATP synthase epsilon chain, chloroplastic (AHRD V3.3 *** A0A1U8QCD5_CAPAN) ATCG00470 Solyc00g500141.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1W5PW46_9DIPS) Solyc00g500142.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic (AHRD V3.3 *** A0A1U8QD64_CAPAN) Solyc00g500143.1 0 1 0 0 0 0 0 0 0 0 1 0 2 2 0 30S ribosomal protein S4, chloroplastic (AHRD V3.3 *** I6N958_DATST) ATCG00380 Solyc00g500144.1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 30S ribosomal protein S14, chloroplastic (AHRD V3.3 *-* A0A2G2X601_CAPBA) Solyc00g500145.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Maturase K (AHRD V3.3 *** A0A2G3DGH8_CAPCH) Solyc00g500146.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* J7H400_CAPAN) Solyc00g500147.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0U1ZJJ5_9SOLN) Solyc00g500148.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1W5PW46_9DIPS) Solyc00g500149.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic (AHRD V3.3 *** A0A1U8QD64_CAPAN) Solyc00g500150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2, chloroplastic (AHRD V3.3 *** I6N9C2_DATST) Solyc00g500151.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *** A0A1U8QBZ9_CAPAN) Solyc00g500152.1 12 9 33 20 12 26 27 9 2 6 40 17 11 12 27 50S ribosomal protein L2 (AHRD V3.3 *** H6T990_9CARY) Solyc00g500153.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S3, chloroplastic (AHRD V3.3 *** A0A1U8QD95_CAPAN) Solyc00g500154.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic (AHRD V3.3 *** A0A1U8QD64_CAPAN) Solyc00g500155.1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 50S ribosomal protein L14, chloroplastic (AHRD V3.3 *** I6N992_DATST) ATCG00780 Solyc00g500156.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S11, chloroplastic (AHRD V3.3 *** G9FCH9_9LAMI) ATCG00750 Solyc00g500157.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1W5PW46_9DIPS) ATCG00740 Solyc00g500158.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b6-f complex subunit 4 (AHRD V3.3 *** A0A2G2XBM1_CAPBA) ATCG00730 Solyc00g500159.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0W6G5_9ASPA) Solyc00g500161.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500162.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500163.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500164.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g112190.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500166.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500167.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FC (AHRD V3.3 *-* A0A0C5APX0_HYONI) Solyc00g230080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D2 (AHRD V3.3 *** A0A0K0N7Y1_9LILI) Solyc00g316530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta, mitochondrial (AHRD V3.3 *-* A0A2G2V6Z5_CAPBA) Solyc00g069880.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2G2YCL7_CAPAN) Solyc00g500168.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transport membrane protein (AHRD V3.3 *** A0A0C5ARU2_HYONI) ATMG00570 Solyc00g013100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g013110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g126010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW protein: NADH-ubiquinone oxidoreductase chain-like protein (AHRD V3.3 *-* ATMG01330.1) Solyc00g126000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 orf300 gene product (mitochondrion) (AHRD V3.3 *-* NP_064003.1) Solyc00g125990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 2 (AHRD V3.3 *** A0A0C5B2A9_HYONI) AT2G07689 Solyc00g125980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit (AHRD V3.3 -** A0A2K3PKA7_TRIPR) Solyc00g244300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g244290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 2 (AHRD V3.3 *-* A0A0C5B2A9_HYONI) Solyc00g244280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 senescence-associated carboxylesterase 101-like isoform X3 (AHRD V3.3 *-* XP_024928153.1) Solyc00g500169.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *** A0A0C5ARN6_HYONI) ATMG00665 Solyc00g500170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome C oxidase subunit II-like%2C transmembrane domain-containing protein (AHRD V3.3 *** ATMG01280.1) AT2G07695 Solyc00g013170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 orf101 (mitochondrion) (AHRD V3.3 *-* YP_009430405.1) Solyc00g013180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *-* A0A290WL40_SOLLC) Solyc00g500171.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *** A0A2G3CZD8_CAPCH) Solyc00g500172.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *** A0A2G2X0J9_CAPBA) Solyc00g320430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500173.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATPase subunit 4 (AHRD V3.3 *** A0A0C5B288_HYONI) ATMG00640 Solyc00g019750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g019730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 3 (AHRD V3.3 *** A0A290WL11_SOLLC) Solyc00g500174.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500176.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500177.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500178.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500179.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500181.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *** A0A2Z6JIR4_9VIRU) ATMG01110 Solyc00g500182.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein (AHRD V3.3 *-* A0A1P8B2M8_ARATH) AT2G07674 Solyc00g118680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g118690.1 4 24 96 26 44 45 29 19 13 12 68 36 33 26 50 NADH-ubiquinone oxidoreductase chain 1 (AHRD V3.3 *-* A0A2G2YI85_CAPAN) Solyc00g023600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g023590.2 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 Cytochrome f (AHRD V3.3 *-* A0A2G3AYY8_CAPCH) Solyc00g023580.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g023570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g014860.1 0 1 0 6 1 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g014850.1 5 4 15 2 38 19 7 16 17 6 19 8 18 4 8 orf86 (mitochondrion) (AHRD V3.3 *** YP_002608396.1) Solyc00g500183.1 100 81 252 197 163 196 173 122 141 144 198 160 102 162 150 NADH dehydrogenase subunit 7 (AHRD V3.3 *-* A0A220T1K3_9ROSI) Solyc00g500184.1 40 38 51 36 102 58 32 35 20 26 70 35 87 53 100 NADH dehydrogenase subunit 7 (AHRD V3.3 *** A0A0C5B9X5_9SOLA) ATMG00510 Solyc00g500185.1 24 5 25 14 24 12 21 14 22 17 22 7 45 38 43 NADH dehydrogenase subunit 7 (AHRD V3.3 *-* G9FCP1_9LAMI) Solyc00g014810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g014800.1 0 0 0 0 0 1 2 0 1 0 0 0 1 0 0 Zinc finger protein KNUCKLES (AHRD V3.3 *** A0A2G3ACW4_CAPAN) Solyc00g014790.2 22 33 10 24 40 21 21 29 18 14 5 30 24 25 3 Unknown protein Solyc00g094550.1 0 0 2 0 16 0 1 5 2 0 0 3 0 0 0 hypothetical protein (AHRD V3.3 *-* AT2G07628.1) Solyc00g094540.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g094530.1 2 1 1 2 12 1 1 0 0 1 0 5 4 5 0 NADH-ubiquinone oxidoreductase chain 1 (AHRD V3.3 *** A0A2G2XVU5_CAPAN) AT2G07785 Solyc00g094520.1 11 6 31 43 26 34 27 22 16 12 36 12 24 13 3 orf100 (mitochondrion) (AHRD V3.3 *** YP_005090391.1) Solyc00g023700.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g023710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g049210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *** A0A0C5B9X0_9SOLA) ATMG00830 Solyc00g049220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (R)-mandelonitrile lyase-like (AHRD V3.3 *-* A0A2G2VFL1_CAPBA) Solyc00g500186.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 1 (AHRD V3.3 *** A0A2G2YXI2_CAPAN) ATMG01360 Solyc00g500187.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *-* A0A290WL40_SOLLC) Solyc00g500188.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *** A0A2G3CZD8_CAPCH) Solyc00g500189.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *** A0A2G2X0J9_CAPBA) Solyc00g021660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Neutral/alkaline invertase (AHRD V3.3 *-* V5N411_MANES) Solyc00g500190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** I6N946_DATST) Solyc00g500191.1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc00g500192.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *** A0A1U8QCJ3_CAPAN) ATCG01110 Solyc00g500193.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *** A0A2G2XBN0_CAPBA) ATCG01100 Solyc00g500194.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis protein CcsA (AHRD V3.3 *-* A0A1U8QCK2_CAPAN) Solyc00g500195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *** J7H711_CAPAN) ATCG01010 Solyc00g500196.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *** K4EQH9_DATST) ATCG01000 Solyc00g500197.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 protein (AHRD V3.3 *-* J7H9P3_CAPAN) Solyc00g500198.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *** J7H711_CAPAN) ATCG01280 Solyc00g500199.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *** K4EPK3_DATST) Solyc00g500200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *** A0A1U8QBZ9_CAPAN) ATCG00020 Solyc00g500201.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase K (AHRD V3.3 *** A0A2G3DGH8_CAPCH) ATCG00040 Solyc00g500202.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein K (AHRD V3.3 *** A0A1U8QD48_CAPAN) ATCG00070 Solyc00g500203.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *** I6N942_DATST) ATCG00120 Solyc00g500204.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** I6N946_DATST) ATCG00160 Solyc00g500205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A1U8QCC7_CAPAN) Solyc00g500206.1 0 1 0 0 2 1 1 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *** A0A078EKT7_BRANA) ATCG00280 Solyc00g500207.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S14, chloroplastic (AHRD V3.3 *-* A0A2G2X601_CAPBA) ATCG00330 Solyc00g500208.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *** I6N956_DATST) ATCG00340 Solyc00g500209.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *** K4EPK3_DATST) ATCG00350 Solyc00g500210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *** K4EQH9_DATST) ATCG00360 Solyc00g500211.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *** J7H711_CAPAN) Solyc00g500212.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S4, chloroplastic (AHRD V3.3 *** I6N958_DATST) ATCG00380 Solyc00g500213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1NZC8_ARTAN) AT1G48690 Solyc00g500214.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1NZC8_ARTAN) Solyc00g322630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1NZC8_ARTAN) AT1G48690 Solyc00g500215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500216.1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1MJ34_ARTAN) Solyc00g500217.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc00g500218.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1NZC8_ARTAN) AT2G46370 Solyc00g266110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1NZC8_ARTAN) AT1G48690 Solyc00g254910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1NZC8_ARTAN) Solyc00g500219.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *** A0A2K3PAY3_TRIPR) AT5G18000 Solyc00g500220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein At1g49475-like (AHRD V3.3 *-* XP_025886111.1) Solyc00g500221.1 0 1 0 2 0 0 12 3 1 5 0 0 7 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3DFU3_CEPFO) Solyc00g500222.1 0 5 2 2 5 2 33 0 0 0 8 8 6 0 2 Transcriptional factor B3 family protein (AHRD V3.3 *-* A0A2H1ZEQ2_ARATH) AT5G18000 Solyc00g198360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger transcription factor 4 Solyc00g500223.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0W6G5_9ASPA) Solyc00g036520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g052540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g052530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500224.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FC (AHRD V3.3 *-* A0A0C5B7H6_9SOLA) ATMG00180 Solyc00g047180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g047190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g047200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b (AHRD V3.3 *-* A0A2G3ARK2_CAPCH) Solyc00g500225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 3 (AHRD V3.3 *** G9FCN6_9LAMI) Solyc00g500226.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FC (AHRD V3.3 *-* A0A0C5B7H6_9SOLA) AT2G07674 Solyc00g500227.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *** A0A2Z6JIR4_9VIRU) ATMG01110 Solyc00g500228.1 11 1 15 2 14 4 6 4 3 6 4 5 13 1 6 Ribosomal protein L2 (AHRD V3.3 *** A0A290WL33_SOLLC) ATMG00560 Solyc00g500229.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500231.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500232.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500233.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500234.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500235.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500236.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MP domain-containing protein (AHRD V3.3 *-* A0A1Q3BUD1_CEPFO) Solyc00g500237.1 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 Transport membrane protein (AHRD V3.3 *-* A0A0C5ARU2_HYONI) Solyc00g230070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A220NAN4_9BRAS) Solyc00g230060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H protein (AHRD V3.3 *-* A0A2I0WBN4_9ASPA) Solyc00g025300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 --* AT2G07674.2) Solyc00g025290.1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 hypothetical protein (AHRD V3.3 *** ATMG00660.1) ATMG00660 Solyc00g500238.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 orf211 gene product (mitochondrion) (AHRD V3.3 --* NP_064093.1) Solyc00g020040.1 2 2 2 7 15 7 7 0 1 6 0 1 2 1 1 Cytochrome c biogenesis B (AHRD V3.3 *** A0A0C5B708_9SOLA) ATMG00110 Solyc00g020030.1 0 1 9 2 5 19 12 10 2 6 13 15 5 8 0 Unknown protein Solyc00g020020.2 0 0 4 0 11 0 1 0 0 0 0 3 2 0 0 Unknown protein Solyc00g020010.1 21 26 105 51 52 66 76 21 22 19 83 36 62 62 81 Unknown protein Solyc00g020000.1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Unknown protein Solyc00g019990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g019980.2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ribosomal protein L2 (chloroplast) (AHRD V3.3 *-* YP_009232109.1) Solyc00g019970.2 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 Unknown protein Solyc00g019950.1 3 1 3 0 16 5 1 0 5 3 4 3 16 7 0 NADH dehydrogenase subunit 9 (AHRD V3.3 *** A0A290WKX8_SOLLC) ATMG00070 Solyc00g500239.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A142DP97_9LAMI) Solyc00g500240.1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 Cytochrome b (AHRD V3.3 *** A0A2G3ARK2_CAPCH) AT2G07727 Solyc00g500241.1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FC (AHRD V3.3 *-* A0A0C5B7H6_9SOLA) ATMG00180 Solyc00g036530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500242.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Heme exporter protein C (AHRD V3.3 *** A0A2S4LUD9_9BRAD) AT2G07771 Solyc00g500243.1 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A0C5B2A3_HYONI) Solyc00g500244.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *** A0A2G2X686_CAPBA) Solyc00g500245.1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 Ribosomal protein S3 (AHRD V3.3 *** A0A290WKX3_SOLLC) ATMG00090 Solyc00g500246.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g007450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger transcription factor 2 Solyc00g016590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g028960.1 1 1 5 7 0 0 0 0 0 0 0 0 8 7 16 monothiol glutaredoxin-S1-like (AHRD V3.3 *** A0A1U7WLZ4_NICSY) AT1G03020 Solyc00g500247.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook motif DNA-binding family protein (AHRD V3.3 *-* A0A2U1PYS7_ARTAN) Solyc00g500248.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook, DNA-binding motif-containing protein (AHRD V3.3 *-* A0A2U1KK62_ARTAN) Solyc00g500249.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *** A0A0C5B9X0_9SOLA) ATMG00830 Solyc00g500250.1 4 0 5 15 0 6 6 1 1 4 8 2 8 11 3 Cytochrome c oxidase subunit 1 (AHRD V3.3 *** A0A2G2YXI2_CAPAN) ATMG01360 Solyc00g500251.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *-* A0A290WL40_SOLLC) Solyc00g500252.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *** A0A2G3CZD8_CAPCH) Solyc00g500253.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *** A0A2G2X0J9_CAPBA) Solyc00g021650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g021640.2 9 5 8 4 23 25 14 10 15 11 16 8 64 8 43 Ribosomal protein S4 (AHRD V3.3 *** A0A0C5B738_9SOLA) ATMG00290 Solyc00g021630.1 4 1 3 1 8 3 3 4 6 5 0 0 13 3 1 NADH-ubiquinone oxidoreductase chain 6 (AHRD V3.3 *** A0A0C5B7I5_9SOLA) ATMG00270 Solyc00g500254.1 0 4 2 0 9 0 0 2 0 1 0 0 0 0 0 50S ribosomal protein L20, chloroplastic (AHRD V3.3 *-* A0A2P1M7F3_9LAMI) Solyc00g181240.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g181250.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2G2V3B6_CAPBA) Solyc00g500255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc00g500256.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *-* A0A1Y0B159_9LAMI) Solyc00g500257.1 2 2 3 2 0 2 2 0 0 2 5 2 3 0 0 Transmembrane protein (AHRD V3.3 *-* A0A1P8B2M8_ARATH) AT2G07674 Solyc00g500258.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc00g500259.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b (AHRD V3.3 *-* A0A2G3ARK2_CAPCH) Solyc00g500261.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 3 (AHRD V3.3 *** A0A2G2V3C2_CAPBA) AT2G07751 Solyc00g500262.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein (AHRD V3.3 *-* Q3EC50_ARATH) AT2G07674 Solyc00g500263.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *** A0A2Z6JIR4_9VIRU) ATMG01110 Solyc00g500264.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500265.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500266.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500267.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500268.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500269.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500271.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *** A0A0C5ARN6_HYONI) Solyc00g500272.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome C oxidase subunit II-like%2C transmembrane domain-containing protein (AHRD V3.3 *** ATMG01280.1) AT2G07695 Solyc00g500273.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S19 (AHRD V3.3 *** A0A290WKX2_SOLLC) ATCG00820 Solyc00g500274.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *** A0A290WKX3_SOLLC) ATMG00090 Solyc00g500275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *** A0A2G2X686_CAPBA) Solyc00g500276.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A0C5B2A3_HYONI) Solyc00g500277.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heme exporter protein C (AHRD V3.3 *** A0A2S4LUD9_9BRAD) AT2G07771 Solyc00g052430.2 0 0 0 0 0 0 0 0 1 0 0 0 9 0 0 Cytochrome c biogenesis FC (AHRD V3.3 *** A0A0C5B7H6_9SOLA) Solyc00g500278.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) ATCG01000 Solyc00g500279.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc00g500280.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *** A0A1S5SJX5_ORYVI) Solyc00g500281.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X5W4_9ASPA) Solyc00g500282.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500283.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500284.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1NZC8_ARTAN) Solyc00g500285.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1MJ34_ARTAN) AT1G48690 Solyc00g500286.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1NZC8_ARTAN) Solyc00g500287.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1MJ34_ARTAN) AT1G48690 Solyc00g500288.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500289.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500290.1 0 0 0 0 5 3 0 2 1 0 0 0 4 1 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *** A0A1U8QCC7_CAPAN) ATCG00170 Solyc00g500291.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** I6N946_DATST) ATCG00160 Solyc00g500292.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *** I6N942_DATST) ATCG00120 Solyc00g500293.1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein K (AHRD V3.3 *** A0A1U8QD48_CAPAN) ATCG00070 Solyc00g500294.1 0 0 1 1 0 1 1 0 0 0 6 0 0 0 0 Unknown protein Solyc00g500295.1 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 Maturase K (AHRD V3.3 *** A0A2G3DGH8_CAPCH) ATCG00040 Solyc00g500296.1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 Photosystem II protein D1 (AHRD V3.3 *** A0A1U8QBZ9_CAPAN) ATCG00020 Solyc00g500297.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2 (AHRD V3.3 *** H6T990_9CARY) Solyc00g500298.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2, chloroplastic (AHRD V3.3 *** I6N9C2_DATST) Solyc00g500299.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 protein (AHRD V3.3 *-* J7H9P3_CAPAN) Solyc00g500300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 protein (AHRD V3.3 *-* J7H9P3_CAPAN) Solyc00g500301.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 (AHRD V3.3 *-* A0A346JLD3_9ASTE) Solyc00g500302.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATPase subunit 4 (AHRD V3.3 *** A0A0C5B288_HYONI) ATMG00640 Solyc00g500303.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Cytochrome c oxidase subunit 3 (AHRD V3.3 *** A0A0C5BKQ0_9SOLA) AT2G07687 Solyc00g500304.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A142DP97_9LAMI) Solyc00g500305.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500306.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500307.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500308.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500309.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *** A0A290WKX3_SOLLC) ATMG00090 Solyc00g500310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *** A0A2G2X686_CAPBA) Solyc00g500311.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A0C5B2A3_HYONI) Solyc00g500312.1 0 0 1 0 0 0 0 0 0 0 0 0 0 3 6 Cytochrome b (AHRD V3.3 *-* A0A2G3ARK2_CAPCH) Solyc00g500313.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500314.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 2 (AHRD V3.3 *-* A0A0C5B2A9_HYONI) Solyc00g500315.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: uncharacterized protein LOC112326444, partial (AHRD V3.3 *-* XP_024449890.1) Solyc00g500316.1 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 NADH dehydrogenase subunit 2 (AHRD V3.3 *-* A0A060DER8_9GENT) Solyc00g500317.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *** A0A0C5ARN6_HYONI) Solyc00g500318.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Cytochrome C oxidase subunit II-like%2C transmembrane domain-containing protein (AHRD V3.3 *** ATMG01280.1) AT2G07695 Solyc00g012540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger transcription factor 3 Solyc00g500319.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *** A0A1U8QCC7_CAPAN) Solyc00g500320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *** A0A1U8QBZ9_CAPAN) ATCG00160 Solyc00g500321.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit b, chloroplastic (AHRD V3.3 *** I6N943_DATST) Solyc00g500322.1 0 0 0 1 2 1 0 0 0 0 0 0 0 2 0 ATP synthase subunit b, chloroplastic (AHRD V3.3 *** I6N943_DATST) ATCG00130 Solyc00g500323.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *** I6N942_DATST) ATCG00120 Solyc00g500324.1 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 Protein TIC 214 (AHRD V3.3 *** TI214_SOLTU) Solyc00g500325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 (AHRD V3.3 *-* A0A346JLD3_9ASTE) Solyc00g500326.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 protein (AHRD V3.3 *-* J7H9P3_CAPAN) Solyc00g500327.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *** A0A1Z1GA65_LITCN) ATCG01280 Solyc00g500328.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L2, plastid (AHRD V3.3 *-* A0A2U1PJW3_ARTAN) Solyc00g500329.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *** A0A1U8QBZ9_CAPAN) ATCG00020 Solyc00g500330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase K (AHRD V3.3 *** A0A2G3DGH8_CAPCH) ATCG00040 Solyc00g500331.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein K (AHRD V3.3 *** A0A1U8QD48_CAPAN) ATCG00070 Solyc00g500332.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *** I6N942_DATST) ATCG00120 Solyc00g500333.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit b, chloroplastic (AHRD V3.3 *** I6N943_DATST) Solyc00g500334.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit c, chloroplastic (AHRD V3.3 *** A0A2G2XQ72_CAPBA) Solyc00g500335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit a, chloroplastic (AHRD V3.3 *** J7H3L4_CAPAN) ATCG00150 Solyc00g500336.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MZL8_TRIPR) ATMG00240 Solyc00g500337.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MZL8_TRIPR) ATMG00240 Solyc00g500338.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500339.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 orf211 gene product (mitochondrion) (AHRD V3.3 --* NP_064093.1) Solyc00g500341.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500342.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500343.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** ATMG00660.1) Solyc00g500344.1 23 8 0 10 4 4 0 0 2 4 1 8 0 0 0 ATP synthase subunit beta, chloroplastic (AHRD V3.3 *-* A0A2U1KL25_ARTAN) Solyc00g500345.1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 ATP synthase subunit alpha (AHRD V3.3 *** A0A2G3AS26_CAPCH) ATMG01190 Solyc00g500346.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transport membrane protein (AHRD V3.3 *** A0A0C5ARU2_HYONI) ATMG00570 Solyc00g500347.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *** A0A0C5B9X0_9SOLA) Solyc00g500348.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *** A0A0C5B9X0_9SOLA) ATMG00830 Solyc00g500349.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 1 (AHRD V3.3 *** A0A2G2YXI2_CAPAN) ATMG01360 Solyc00g500350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *** A0A2Z6JIR4_9VIRU) ATMG01110 Solyc00g500351.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S13 (AHRD V3.3 *-* A0A0C5B313_9SOLA) Solyc00g500352.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g032030.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase (AHRD V3.3 *-* A0A2G2WYW6_CAPBA) Solyc00g500353.1 82 101 211 31 0 2 1 9 5 24 142 13 25 20 83 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G2VZP0_CAPBA) Solyc00g076250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A103XKK0_CYNCS) Solyc00g500354.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) ATMG00240 Solyc00g500355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500356.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc00g500357.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transport membrane protein (AHRD V3.3 *** A0A0C5ARU2_HYONI) ATMG00570 Solyc00g500358.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ATP synthase subunit alpha (AHRD V3.3 *** A0A2H4NB27_SOLLC) ATMG01190 Solyc00g500359.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Cytochrome c oxidase subunit 2 (AHRD V3.3 *** A0A2G2X686_CAPBA) Solyc00g500360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A0C5B2A3_HYONI) Solyc00g500361.1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 NADH-ubiquinone oxidoreductase chain 3 (AHRD V3.3 *-* A0A2G2V3C2_CAPBA) AT2G07695 Solyc00g500362.1 1 0 2 1 1 2 0 0 0 1 0 0 2 3 1 Ribosomal protein L5 (AHRD V3.3 *** A0A290WL59_SOLLC) Solyc00g500363.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L5 (AHRD V3.3 *** A0A290WL59_SOLLC) Solyc00g500364.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b (AHRD V3.3 *** A0A2G3ARK2_CAPCH) AT2G07727 Solyc00g308530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g284510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger CCCH domain-containing protein 6-like isoform X2 (AHRD V3.3 *-* A0A2I4DEC7_9ROSI) Solyc00g500365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500366.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500367.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500368.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500369.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500371.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500372.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500373.1 9 10 9 7 3 8 8 6 8 7 3 5 5 9 8 Magnesium transporter CorA-like family protein (AHRD V3.3 *-* A0A2K3P294_TRIPR) Solyc00g500374.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g006650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500376.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500377.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500378.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500379.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Unknown protein Solyc00g500381.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500382.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500383.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500384.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500385.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500386.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500387.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500388.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500389.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger CCCH domain-containing protein 24 (AHRD V3.3 --* XP_022001075.1) Solyc00g500391.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500392.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500393.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500394.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500396.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500397.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500398.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500399.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500401.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500402.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500403.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g007920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g007940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g007930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500404.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* A0A2U1N0W2_ARTAN) Solyc00g500406.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3PDT8_TRIPR) Solyc00g500407.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500408.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc00g500409.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g004000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g004002.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g004004.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g004006.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g004008.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g005000.3 368 1423 1250 1031 1675 1207 1297 1036 1202 1150 1089 1021 2125 1173 1298 Glutamate decarboxylase (AHRD V3.3 *** B1Q3F2_SOLLC) AT2G02010 Solyc01g005010.4 212 376 390 374 438 368 347 251 348 261 446 256 441 491 869 protein XRI1-like (AHRD V3.3 *** A0A2I4FA04_9ROSI) AT2G01990 Solyc01g005020.3 1202 1068 1090 1151 1004 1077 1163 1070 1594 1273 1153 1048 995 1297 1403 Salt Overly Sensitive 1 AT2G01980 Solyc01g005030.4 740 323 503 449 407 395 362 328 471 591 518 489 302 404 462 MAP kinase kinase kinase 1 AT4G32250 Solyc01g005040.3 90 18 24 32 1 3 1 6 5 40 25 1 27 18 15 CASP-like protein (AHRD V3.3 *** A0A2G3CF58_CAPCH) Solyc01g005050.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CASP-like protein (AHRD V3.3 --* A0A2G3CF58_CAPCH) Solyc01g005060.3 154 140 238 170 210 146 166 148 215 114 311 99 392 214 229 Zinc finger protein (AHRD V3.3 *** A0A200QDS5_9MAGN) Solyc01g005070.3 0 6 1 2 14 15 10 11 3 2 0 9 2 5 0 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** AT1G68110.1) AT1G25240 Solyc01g005080.3 1574 1452 1409 1510 1033 1008 1038 999 1268 1336 1143 888 1405 1004 1402 65-kDa microtubule-associated protein 6 (AHRD V3.3 *** A0A2G2XSF2_CAPBA),Pfam:PF03999 AT2G01910 Solyc01g005090.3 0 0 9 0 0 0 1 0 0 1 0 0 0 0 0 Type I inositol polyphosphate 5-phosphatase 5 (AHRD V3.3 *-* IP5P5_ARATH) AT2G01900 Solyc01g005100.4 507 408 557 719 538 658 691 438 485 498 791 513 463 572 842 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G68080.1) AT1G68080 Solyc01g005110.3 257 332 448 490 366 397 413 279 271 269 405 358 417 497 400 Dolichol-phosphate mannosyltransferase-related protein (AHRD V3.3 *** A0A2U1LCX2_ARTAN) AT1G48140 Solyc01g005120.3 629 960 1243 971 1432 1439 1181 1352 1099 601 992 857 1057 1104 1258 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G3AYH1_CAPCH) AT2G01850 Solyc01g005130.2 404 262 347 304 202 208 185 166 226 385 493 175 337 335 555 Zinc finger protein 1 (AHRD V3.3 *** A0A2G2XSH3_CAPBA) AT1G66140 Solyc01g005140.3 27 10 0 8 0 0 0 0 2 7 0 0 1 8 30 Cytochrome b561/ferric reductase transmembrane (AHRD V3.3 *** A0A2U1MNP8_ARTAN) Solyc01g005150.3 14 17 56 33 20 36 19 21 23 20 24 15 11 16 26 Cytochrome b561/ferric reductase transmembrane protein family (AHRD V3.3 *** A0A2U1MNM8_ARTAN) AT1G14730 Solyc01g005160.4 4 1 8 0 0 0 0 0 2 1 1 0 0 1 0 Avr9/Cf-9 rapidly elicited protein 1 AT5G37490 Solyc01g005210.4 3078 1377 1337 1107 985 1060 1093 996 1389 2092 1396 1359 984 1227 1643 Trehalose-6-phosphate synthase (AHRD V3.3 *** E5GC29_CUCME) Solyc01g005180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein LITTLE ZIPPER 3 (AHRD V3.3 *-* A0A2I4E2N9_9ROSI) AT3G52770 Solyc01g005220.3 175 133 98 46 4 5 4 8 44 39 41 10 182 63 61 MACPF domain-containing protein (AHRD V3.3 *** A0A2G3AYJ5_CAPCH) AT1G14780 Solyc01g005230.4 1 3 0 4 2 1 0 3 1 2 0 0 3 5 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1QHF5_ARTAN) AT1G68040 Solyc01g005240.4 1203 1469 1171 1145 1036 1053 1037 1140 1115 1224 906 1330 1479 1329 1127 Aspartokinase (AHRD V3.3 *** A0A2I4FQZ8_9ROSI) AT5G14060 Solyc01g005250.4 1421 1570 982 1014 1014 1182 1145 1239 960 909 790 1253 1480 1232 1073 Aspartate-semialdehyde dehydrogenase (AHRD V3.3 *** A0A2G3AYJ3_CAPCH) AT1G14810 Solyc01g005253.1 108 167 318 223 154 164 186 144 199 193 342 143 279 188 171 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A1Y1I4L4_KLENI) AT1G14820 Solyc01g005257.1 195 149 177 173 218 189 164 199 308 164 196 218 295 247 167 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A1Y1I4L4_KLENI) AT1G14820 Solyc01g005280.3 88 121 213 185 255 242 218 206 210 113 294 221 163 223 238 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A1Y1I4L4_KLENI) AT1G14820 Solyc01g005290.4 68 82 225 172 128 119 146 130 286 99 407 193 117 245 527 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A1Y1I4L4_KLENI) AT1G14820 Solyc01g005300.4 2003 469 2934 2464 73 101 113 84 2594 917 3651 2902 968 3507 4248 Adagio-like protein 1 (AHRD V3.3 *** A0A1U8H9V5_CAPAN) AT1G68050 Solyc01g005310.3 0 0 0 0 0 0 2 0 0 3 0 0 0 1 0 Dynamin (AHRD V3.3 *** E5GB64_CUCME) AT1G14830 Solyc01g005320.2 0 5 42 25 1 13 7 3 6 7 3 0 0 7 51 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) (AHRD V3.3 *** O81042_ARATH) Solyc01g005330.3 1432 2574 3155 2557 3390 3751 3940 3820 3767 2119 3168 2881 2199 2700 2568 Microtubule-associated protein 70 (AHRD V3.3 *** A0A200QNX4_9MAGN) AT1G24764 Solyc01g005340.3 427 279 305 284 214 197 189 172 256 413 362 244 364 331 492 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2G2XSI9_CAPBA) AT2G01680 Solyc01g005350.4 0 1 9 5 0 5 4 0 5 12 36 23 8 11 1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1QHF5_ARTAN) AT1G68040 Solyc01g005360.4 0 0 4 0 0 0 0 0 1 1 17 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1QHF5_ARTAN) AT1G68040 Solyc01g005370.3 53 19 25 40 33 42 22 29 45 70 49 39 43 35 101 Calcium-dependent protein kinase (AHRD V3.3 *-* CDPK_DAUCA) AT1G24620 Solyc01g005380.3 511 527 586 608 649 632 669 698 590 565 627 633 463 673 688 Histone-lysine N-methyltransferase setd3 (AHRD V3.3 *** A0A1J3D0A4_NOCCA) AT1G24610 Solyc01g005390.3 0 5 2 2 4 12 5 3 5 6 12 2 3 4 18 Nudix hydrolase (AHRD V3.3 *** A0A2U1MBD3_ARTAN) AT2G01670 Solyc01g005400.3 57 33 84 81 37 38 47 21 42 46 131 14 25 55 216 Caleosin (AHRD V3.3 *** A0A200QL80_9MAGN) AT1G70680 Solyc01g005410.4 294 156 73 137 25 27 29 18 108 322 185 63 100 149 556 Caleosin (AHRD V3.3 *** A0A200QL80_9MAGN) Solyc01g005420.2 75 50 36 26 0 0 4 0 14 31 73 1 42 43 21 C2 calcium-dependent membrane targeting (AHRD V3.3 *-* A0A2U1LLL4_ARTAN) AT3G05440 Solyc01g005430.3 172 98 79 88 125 120 116 82 131 135 147 113 122 89 82 Plant ubx domain-containing protein 2 (AHRD V3.3 *** A0A1J6HWL3_NICAT) AT2G01650 Solyc01g005440.4 3341 3673 2120 2059 3197 2652 2607 3333 4892 7828 3293 5613 2594 2890 1340 Jasmonate ZIM-domain protein 2 (AHRD V3.3 *** B3Y562_TOBAC) AT3G17860 Solyc01g005450.3 26 35 21 40 34 37 20 25 41 35 17 14 28 23 49 F-box protein SKIP28 (AHRD V3.3 *** A0A2I4F4P9_9ROSI) AT2G01620 Solyc01g005460.4 49 196 262 176 228 414 384 229 175 74 329 133 122 120 133 Dynein light chain (AHRD V3.3 *** A0A1U8EJW7_CAPAN) AT1G23220 Solyc01g005470.3 267 161 348 122 4 4 6 14 71 187 291 39 124 196 118 protein PLANT CADMIUM RESISTANCE 2-like (AHRD V3.3 *** A0A1U8ETE7_CAPAN) AT1G14870 Solyc01g005480.3 550 616 919 802 619 661 697 636 588 705 724 569 735 572 447 transmembrane protein%2C putative (DUF677) (AHRD V3.3 *** AT3G19330.4) AT3G19330 Solyc01g005490.3 404 511 421 441 721 841 749 654 537 460 441 485 517 476 444 IAA-amino acid hydrolase ILR1 (AHRD V3.3 *** A0A2G2WJJ8_CAPBA) AT3G02875 Solyc01g005500.3 0 3 6 6 13 6 23 20 13 3 0 2 10 6 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PL19_ARTAN),Pfam:PF13561 Solyc01g005510.3 14 58 103 1 9 0 9 8 1 0 4 3 6 3 2 L-ascorbate oxidase homolog (AHRD V3.3 *** Q6UN75_TOBAC) Solyc01g005520.4 427 668 293 487 637 648 567 690 524 434 385 456 444 444 288 Protein LOW PSII ACCUMULATION 1, chloroplastic (AHRD V3.3 *-* A0A1J3E7D8_NOCCA) AT1G55480 Solyc01g005530.3 127 210 290 341 436 406 409 362 241 194 288 234 297 248 278 nuclear polyadenylated RNA-binding protein (AHRD V3.3 *** AT3G13480.2) AT3G13480 Solyc01g005540.4 290 495 500 539 578 610 684 652 485 293 312 384 374 574 436 Lysine--tRNA ligase (AHRD V3.3 *** A0A1U8HGH5_CAPAN) AT3G13490 Solyc01g005550.3 6132 7922 7367 8676 14681 15616 14475 11425 8361 6091 10312 9684 7066 7485 7788 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3BKR6_CEPFO) AT1G55360 Solyc01g005560.3 1721 3166 3341 3168 3239 3143 3181 3359 3824 2559 2727 2877 6617 4978 3967 Isocitrate dehydrogenase [NADP] (AHRD V3.3 *** A0A2G3BR90_CAPCH) AT1G65930 Solyc01g005570.4 269 245 402 285 411 364 301 340 393 267 487 293 267 277 317 hypothetical protein (DUF1639) (AHRD V3.3 *** AT1G55340.1) AT1G55340 Solyc01g005580.2 344 353 554 432 631 575 569 466 501 324 577 407 543 554 675 hypothetical protein (DUF1639) (AHRD V3.3 *** AT1G55340.1) AT1G55340 Solyc01g005590.2 65 277 119 212 440 345 357 285 152 109 231 204 129 98 94 Unknown protein Solyc01g005600.4 1514 1038 1050 1059 914 947 968 783 938 990 1132 959 1128 1082 1287 5'-adenylylsulfate reductase-like 5 (AHRD V3.3 *** A0A2G2W4X9_CAPBA) AT3G03860 Solyc01g005610.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3AJV6_CAPAN) Solyc01g005620.3 2950 5198 5429 5527 7093 6939 6985 6428 4454 4211 4347 4511 5194 4980 4621 oxoglutarate/malate translocator AT5G19760 Solyc01g005630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3BR89_CAPCH) AT5G19790 Solyc01g005640.4 513 333 436 375 281 230 270 324 319 355 316 321 469 447 370 Histidine-tRNA ligase (AHRD V3.3 *** A0A1I9LTH3_ARATH) Solyc01g005650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2W4Q8_CAPBA) Solyc01g005660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 5 AT3G13540 Solyc01g005670.3 277 271 315 359 310 312 327 215 276 260 250 214 266 334 315 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2I0X876_9ASPA) AT4G10800 Solyc01g005680.4 15 10 20 24 1 0 0 3 6 3 54 0 9 8 53 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** A0A2I4FSE2_9ROSI) Solyc01g005690.3 464 561 482 365 507 442 405 471 706 449 428 502 612 487 443 Calcium ion binding protein (AHRD V3.3 *** A0A2U1KGE3_ARTAN) AT4G08810 Solyc01g005700.3 596 554 495 500 509 557 501 467 484 417 559 437 553 549 536 Transposase, MuDR, MULE transposase domain protein (AHRD V3.3 *** A0A2U1N7R9_ARTAN) AT1G49920 Solyc01g005710.2 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 Hcr9-Avr9-hir2 (AHRD V3.3 *-* Q3T7E8_SOLHA) Solyc01g005720.3 0 0 17 5 0 0 0 0 0 1 3 0 0 11 0 NL0D (AHRD V3.3 *** Q9ZS82_SOLLC) Solyc01g005730.3 15 17 0 19 0 0 0 0 12 1 20 0 8 2 8 NL0C (AHRD V3.3 *** Q9ZS83_SOLLC) Solyc01g005740.3 23 16 3 16 2 1 4 1 10 10 13 12 30 15 5 Unknown protein Solyc01g005750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lipoxygenase (AHRD V3.3 *-* O49878_SOLLC) Solyc01g005760.3 1661 1017 787 682 79 96 99 143 573 1186 961 203 1690 1056 797 NL0D (AHRD V3.3 *** Q9ZS82_SOLLC) Solyc01g005770.3 27 5 0 6 3 10 18 4 5 6 19 15 13 12 3 Unknown protein Solyc01g150100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g005780.1 40 3 6 0 0 0 1 1 6 10 3 0 65 23 4 NL0E (AHRD V3.3 *** Q9ZS81_SOLLC) Solyc01g005783.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g005787.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g005790.1 271 210 212 255 176 229 238 271 170 280 148 216 154 265 171 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QH82_9MAGN) AT1G10330 Solyc01g005800.3 51 39 82 56 71 94 58 70 43 61 155 96 91 99 106 Calmodulin binding protein (AHRD V3.3 *** A0A2K3N563_TRIPR) AT3G13600 Solyc01g005810.3 2043 2218 2351 1533 1676 1745 1578 1511 1528 1085 1633 1421 2602 2189 2293 Protein MAK16 homolog (AHRD V3.3 *** A0A2G3DEE9_CAPCH) AT1G23280 Solyc01g005820.4 6222 8560 9565 7514 10203 9726 10617 9810 6625 6403 9518 7846 10914 9866 9050 Serine/arginine-rich-splicing factor SCL30A (AHRD V3.3 *** A0A0M9UMR8_NICAT) AT3G13570 Solyc01g005830.4 419 1480 826 680 1860 1539 1723 2086 942 640 597 969 638 713 378 Glucan endo-1,3-beta-glucosidase 4 (AHRD V3.3 *-* A0A2G2XNZ6_CAPBA) Solyc01g005840.3 326 195 215 212 269 242 243 278 187 247 266 305 168 157 230 Ubiquitin conjugating enzyme (AHRD V3.3 *** W7U085_9STRA) AT3G13550 Solyc01g005850.2 304 82 56 240 131 114 188 88 96 167 150 161 37 85 80 Extensin-like protein Dif54 (AHRD V3.3 *-* Q43505_SOLLC) Solyc01g005860.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g005870.3 17 9 26 3 0 0 0 1 1 0 31 0 9 10 0 Cf-like protein (AHRD V3.3 *** A0A140GMU3_SOLLC) Solyc01g005880.1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 Extensin-like protein Dif10 (AHRD V3.3 *-* Q43504_SOLLC) Solyc01g005890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 extensin-2-like (AHRD V3.3 *-* XP_019069150.1) Solyc01g005900.2 311 285 225 376 281 275 226 290 250 296 275 356 216 263 239 Transferase (AHRD V3.3 *** A0A200Q1C0_9MAGN) Solyc01g005910.3 320 272 445 396 409 491 444 355 254 281 294 303 307 343 299 Acid phosphatase/vanadium-dependent haloperoxidase-related protein (AHRD V3.3 *** A0A2U1NM03_ARTAN) AT3G12685 Solyc01g005920.3 43 32 64 113 20 14 12 18 35 66 34 34 30 69 43 Amino acid/polyamine transporter I (AHRD V3.3 *** A0A200RCI7_9MAGN) Solyc01g005930.3 312 160 98 209 120 107 71 79 159 164 142 134 180 160 141 Lipase/lipooxygenase%2C PLAT/LH2 family protein (AHRD V3.3 *** AT1G55280.2) AT1G55280 Solyc01g005940.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phytoene synthase, chloroplastic (AHRD V3.3 *** A0A2G3DEK5_CAPCH),Pfam:PF00494 Solyc01g005950.4 1729 1903 2330 2968 2882 2757 3438 2232 1604 1617 2421 1790 1889 1849 2064 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A2G3DEI1_CAPCH) AT3G58500 Solyc01g005960.3 1331 1663 1588 1815 1806 2111 2221 2087 1521 1439 1473 1681 1676 1900 1555 RNA helicase DEAD1 Solyc01g005970.3 362 363 479 330 310 303 363 337 377 312 469 347 308 380 349 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1U8GYH7_CAPAN) AT1G55270 Solyc01g005980.4 238 333 256 468 506 535 461 553 293 819 344 625 421 416 197 transmembrane protein%2C putative (Protein of unknown function%2C DUF538) (AHRD V3.3 *** AT5G19860.1) AT5G19860 Solyc01g005985.1 350 780 600 653 613 688 530 701 981 610 755 857 625 693 410 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative (AHRD V3.3 *** A0A061GSH0_THECC) Solyc01g006000.3 1081 587 672 828 617 748 806 575 529 754 685 643 589 690 914 GPI mannosyltransferase 2 (AHRD V3.3 *** A0A2G3DEG8_CAPCH) AT1G11880 Solyc01g006010.3 4737 4370 3846 4589 3318 3434 3817 3490 2936 3390 3361 3811 4083 4694 4034 Branchpoint-bridging protein (AHRD V3.3 *-* A0A1J3JYE2_NOCCA) AT3G32940 Solyc01g006020.4 1303 657 696 899 607 732 713 644 955 1542 908 1248 589 851 963 BnaCnng41690D protein (AHRD V3.3 *** A0A078JEK8_BRANA) AT3G32930 Solyc01g006040.3 1983 1786 1719 2425 1866 1966 2179 1359 1166 1436 1880 1423 1402 1484 1956 E3 ubiquitin protein ligase (AHRD V3.3 *** A0A2I4FSG3_9ROSI) AT1G55250 Solyc01g006050.2 4 1 0 1 2 0 0 0 1 0 0 0 1 0 1 transmembrane protein 45B-like (AHRD V3.3 *** A0A2I4DQK0_9ROSI) AT1G55230 Solyc01g006055.1 0 16 2 11 1 10 1 6 9 13 0 7 3 7 113 Dirigent protein (AHRD V3.3 *** K4ASH2_SOLLC) AT1G58170 Solyc01g006080.2 0 0 3 0 7 0 0 2 0 4 1 0 0 4 0 Plant/protein (DUF789) (AHRD V3.3 *** Q8LF98_ARATH) Solyc01g006090.3 133 322 344 159 126 177 140 126 161 88 153 150 395 462 318 Eukaryotic rRNA processing (AHRD V3.3 *** A0A2U1PZE8_ARTAN) AT3G22660 Solyc01g006100.4 176 1020 1222 1187 1830 1675 2184 2004 1122 464 757 1508 318 1011 501 cytosine-5 DNA methyltransferase1L AT1G69770 Solyc01g006110.3 2103 1990 2138 1494 1730 1554 1620 1804 1869 1799 1500 1716 2542 2002 1709 PP2A regulatory subunit TAP46 (AHRD V3.3 *** A0A2G2XNB2_CAPBA) AT5G53000 Solyc01g006120.4 3141 2426 2307 2256 2483 2736 2681 2724 2701 2917 2532 2579 2280 2485 1917 Protein kinase family protein (AHRD V3.3 *** A0A2U1M4N4_ARTAN) AT3G13670 Solyc01g006130.4 451 646 814 834 874 1085 1039 791 695 565 815 701 456 612 1010 DnaJ/Hsp40 cysteine-rich domain superfamily protein (AHRD V3.3 *-* AT2G34860.2) AT2G34860 Solyc01g006140.4 25 136 171 119 252 208 305 203 220 95 103 260 97 222 50 CDT1-like protein a, chloroplastic (AHRD V3.3 *** A0A2I4F6Q2_9ROSI) AT2G31270 Solyc01g006150.3 647 457 674 571 461 552 491 459 420 475 428 509 731 628 647 Cation efflux protein (AHRD V3.3 *** A0A200PY73_9MAGN) AT3G58060 Solyc01g006160.3 2551 6142 6050 4784 5987 6714 6575 5954 3419 3195 5345 4426 6514 5591 5852 60S acidic ribosomal protein P1 (AHRD V3.3 *** A0A2G2W8Q0_CAPBA),Pfam:PF00428 AT4G00810 Solyc01g006170.4 380 1051 836 466 566 624 517 468 462 226 420 421 1283 1088 747 Eukaryotic rRNA processing (AHRD V3.3 *** A0A2U1PZE8_ARTAN) AT3G22660 Solyc01g006180.4 463 624 589 529 437 469 515 441 463 384 391 498 609 756 553 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MH74_ARTAN) AT4G10620 Solyc01g006190.3 2396 1888 2616 1973 2008 2400 2466 1880 1559 1949 2188 1780 2041 2003 2154 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A1U8H1Q2_CAPAN) AT3G58040 Solyc01g006200.3 133 103 115 102 52 110 98 59 49 69 51 76 146 95 82 Unknown protein Solyc01g006210.4 39 177 151 119 238 205 168 184 139 99 116 168 138 191 84 Non-structural maintenance of chromosomes element 1 (AHRD V3.3 *** A0A200Q0A2_9MAGN) AT5G21140 Solyc01g006220.3 287 362 397 407 476 461 513 408 383 344 317 452 291 367 345 histone-lysine N-methyltransferase ASHH3 (AHRD V3.3 *** A0A1S4DKJ0_TOBAC) AT2G44150 Solyc01g006230.3 1624 1439 1345 1491 1272 1306 1423 1243 1324 1576 1219 1344 1366 1404 1203 Cysteine protease (AHRD V3.3 *** A0A2G3AHQ7_CAPAN) AT2G44140 Solyc01g006240.3 46 41 181 97 68 81 59 24 42 72 202 48 41 74 110 Inactive protein restricted tev movement 1 (AHRD V3.3 *** A0A314KP80_NICAT) Solyc01g006250.2 285 189 220 206 199 208 232 140 150 162 172 125 168 215 364 F-box protein (AHRD V3.3 *** A0A2G3AHK9_CAPAN) Solyc01g006260.4 233 242 261 189 201 215 192 213 130 163 183 186 297 234 202 Ribonuclease P/MRP protein subunit POP5 (AHRD V3.3 *** A0A200Q6K4_9MAGN) AT1G04635 Solyc01g006270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g006280.3 1393 2200 1976 2304 2843 2812 3241 3224 3020 2029 2224 2484 2371 2458 2657 Formate--tetrahydrofolate ligase (AHRD V3.3 *** A0A2G3DED7_CAPCH) AT1G50480 Solyc01g006290.4 1566 597 445 1520 10 10 2 2 579 327 514 107 1290 457 2084 Peroxidase (AHRD V3.3 *** K4ASJ5_SOLLC) Solyc01g006300.3 1559 700 159 587 6 5 5 0 168 42 314 15 1241 899 3249 LECEVI1A Solyc01g006310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4ASJ7_SOLLC) AT5G19890 Solyc01g006320.4 308 339 445 256 83 97 63 64 234 274 308 150 616 341 66 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9LJT9_ARATH) AT3G20600 Solyc01g006330.4 74 87 92 82 162 221 198 146 93 57 105 107 60 64 135 Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** A0A2U1MH95_ARTAN) AT1G51110 Solyc01g006340.3 524 494 391 562 332 436 394 359 453 362 520 402 447 605 538 DEAD-box ATP-dependent RNA helicase 41 (AHRD V3.3 *** A0A2G3DEE5_CAPCH) AT3G02065 Solyc01g006350.4 2956 3783 3220 4020 3705 4249 4388 4108 3395 3494 3460 3804 2983 3805 3391 Callose synthase 1 (AHRD V3.3 *** A0A2G3AHL0_CAPAN) Solyc01g006360.4 380 494 321 267 456 360 331 673 668 518 227 586 272 431 310 Callose synthase 9 (AHRD V3.3 *** A0A2G3AHT3_CAPAN) Solyc01g006370.3 2575 5430 5310 5512 7761 7457 7842 9243 7048 5158 3899 7289 3505 5494 4887 Callose synthase (AHRD V3.3 *** K7PRK8_MAIZE) AT5G13000 Solyc01g006380.2 4 8 16 15 3 8 8 5 8 4 1 4 1 2 15 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2U1P546_ARTAN) Solyc01g006390.2 337 1211 2177 2715 7796 6439 4072 5982 11977 5553 4917 16944 778 5060 622 Pistil extensin like protein, partial CDS only (AHRD V3.3 *-* Q7DLN2_TOBAC) Solyc01g006400.4 18632 126863 91705 238234 246665 205149 255120 329575 391783 404924 212294 630253 137219 211870 39596 Pistil extensin like protein, partial CDS only (AHRD V3.3 *-* Q7DLN2_TOBAC) Solyc01g006410.4 0 3 0 1 2 0 1 11 2 2 0 4 0 1 0 Pistil extensin like protein, partial CDS only (AHRD V3.3 *-* Q7DLN2_TOBAC) Solyc01g006420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g006430.3 14555 14278 8910 12117 11318 9777 8735 12365 11174 18321 9521 14842 9322 10003 7925 Fatty acid desaturase (AHRD V3.3 *** E7CCC0_9BRAS) AT3G12120 Solyc01g006440.2 7 9 6 23 0 0 0 0 6 7 23 0 26 0 9 Protein NRT1/ PTR FAMILY 7.1 (AHRD V3.3 *** A0A1U8GXZ4_CAPAN) AT5G19640 Solyc01g006450.4 487 1408 1545 1552 1855 2058 2168 1835 1193 865 1485 1507 1043 1368 1284 Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic (AHRD V3.3 *** A0A2G3DE80_CAPCH) AT2G05990 Solyc01g006460.3 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 Non-structural maintenance of chromosomes element 4-like protein B (AHRD V3.3 *** A0A2G3DE98_CAPCH) Solyc01g006480.3 131 238 288 228 225 263 213 223 223 147 208 219 203 260 178 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q8GYI7_ARATH) AT5G19630 Solyc01g006490.4 228 191 192 212 185 150 159 204 200 183 182 186 267 227 233 UPF0061 protein (AHRD V3.3 *** A0A2G2XP25_CAPBA) AT5G13030 Solyc01g006500.4 335 225 216 178 221 165 167 175 186 203 196 237 196 202 229 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0XE98_9ASPA) AT5G48730 Solyc01g006510.3 1511 646 411 454 487 426 437 576 647 974 507 684 486 549 532 sorbitol related enzyme AT5G51970 Solyc01g006520.3 311 191 237 219 67 99 65 65 188 236 205 138 277 240 171 Receptor-like protein kinase (AHRD V3.3 *** A0A2U1PPA0_ARTAN) AT5G60900 Solyc01g006530.1 1 0 0 0 0 0 0 0 0 0 4 0 3 0 4 Receptor-like protein kinase (AHRD V3.3 *** A0A2U1PPA0_ARTAN) AT5G60900 Solyc01g006540.4 103 125 396 289 20 42 28 23 242 200 457 183 128 278 160 lipoxygenase C AT3G45140 Solyc01g006550.3 36 6 4 11 1 2 0 1 8 1 0 2 15 20 48 Receptor-like protein Cf-9 homolog (AHRD V3.3 *** CF0_SOLLC) Solyc01g006555.1 48 52 43 16 79 65 98 25 17 44 2 2 57 9 15 Lipoxygenase (AHRD V3.3 *** C0KKU8_SOLLC) Solyc01g006580.4 1 4 1 28 5 11 3 4 12 13 1 0 14 6 7 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) Solyc01g006585.1 0 12 4 0 0 0 0 0 37 17 6 8 1 1 3 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) Solyc01g006590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Receptor-like protein kinase (AHRD V3.3 *** A0A2U1PPA0_ARTAN) AT5G60900 Solyc01g006600.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A2U1PR62_ARTAN) Solyc01g006610.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) Solyc01g006620.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061DXG0_THECC) Solyc01g006630.3 437 777 807 750 994 1167 1166 1107 782 605 691 811 894 832 680 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1KNW2_ARTAN) AT3G20790 Solyc01g006640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A2U1PR62_ARTAN) Solyc01g006650.2 53 47 67 44 40 50 39 32 48 46 62 33 40 58 34 ETHYLENE INSENSITIVE 3-like 3 protein (AHRD V3.3 *** A0A2G3DES0_CAPCH) AT1G73730 Solyc01g006660.3 0 0 5 2 30 26 32 25 15 1 43 48 7 5 11 Subtilisin-like protease (AHRD V3.3 *** A0A2I0XJ46_9ASPA) Solyc01g006670.2 181 61 201 165 27 30 25 24 141 46 330 111 36 152 299 Glycosyltransferase (AHRD V3.3 *** A0A2I4H5S7_9ROSI) AT5G12890 Solyc01g006680.4 995 271 1553 840 129 151 145 111 706 306 1476 703 382 1104 1761 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NBL4_ARTAN) AT3G20810 Solyc01g006690.4 205 422 363 508 898 796 787 913 579 400 469 621 318 327 564 IRK-interacting protein (AHRD V3.3 *** A0A2I4FH54_9ROSI) AT5G12900 Solyc01g006700.3 736 1247 993 1060 1509 1432 1429 1575 1067 957 789 1479 730 973 581 downstream neighbor of Son (AHRD V3.3 *** AT3G54750.4) AT3G54750 Solyc01g006710.4 1570 1131 1045 1068 877 1114 1055 1005 1108 803 770 911 970 1337 1154 Helicase (AHRD V3.3 *** A0A200PRN8_9MAGN) Solyc01g006720.4 1325 1236 357 1201 600 685 742 755 1148 1007 470 417 935 689 1517 ABC transporter G family member 27 (AHRD V3.3 *** A0A2G2VCM9_CAPBA) AT5G06530 Solyc01g006730.4 10 9 9 3 0 5 3 5 14 12 21 14 13 7 12 Calcium-dependent protein kinase (AHRD V3.3 *** B8QUH1_GOSHI) AT2G38910 Solyc01g006740.4 134 198 202 236 313 271 314 266 184 138 206 201 147 153 188 Sucrose-phosphatase (AHRD V3.3 *** Q84ZX6_SOLLC) AT2G35840 Solyc01g006750.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g006760.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein (AHRD V3.3 *** Q9FT46_ARATH) AT3G52360 Solyc01g006770.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CIC6_CEPFO) Solyc01g006780.4 15 91 102 93 763 769 642 520 47 32 171 111 36 97 62 Unknown protein Solyc01g006790.3 58 130 75 87 646 605 599 541 100 53 174 206 31 87 78 hypothetical protein (AHRD V3.3 *-* AT2G27180.1) AT3G11690 Solyc01g006800.4 3589 3288 2968 2435 2479 2660 2466 2691 2621 2472 2575 2594 3904 3289 3161 Methionine aminopeptidase 2 (AHRD V3.3 *** A0A2G3AXU8_CAPCH) AT3G59990 Solyc01g006810.4 344 665 817 915 736 782 934 741 1039 882 1133 984 960 997 1144 E3 ubiquitin-protein ligase RHF2A-like (AHRD V3.3 *** A0A2I4GY35_9ROSI) Solyc01g006820.2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc01g006830.3 1216 1389 1641 1537 1081 1147 1154 1116 1857 1273 2386 1303 1779 1456 2000 Protein WVD2-like 1 (AHRD V3.3 *** A0A2G3AXV0_CAPCH) AT2G35880 Solyc01g006840.3 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 Calcium-dependent protein kinase (AHRD V3.3 *** B8QUH1_GOSHI) Solyc01g006845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g006850.1 34 37 43 49 39 36 35 59 46 28 43 60 41 55 39 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q9W7_9MAGN) AT5G06400 Solyc01g006860.3 357 466 450 500 632 498 566 522 509 369 485 539 470 550 364 Co-chaperone, HscB-like protein (AHRD V3.3 *** A8IK66_CHLRE) AT5G06410 Solyc01g006870.4 548 399 572 541 343 369 341 313 474 301 543 340 487 509 783 Polyketide cyclase/dehydrase/lipid transport superfamily protein (AHRD V3.3 *** F4K3U5_ARATH) AT5G06440 Solyc01g006880.4 659 438 375 431 350 359 384 461 525 479 298 410 370 535 599 Histone-lysine N-methyltransferase ATXR7 (AHRD V3.3 *-* A0A2G3AXS4_CAPCH) AT5G42400 Solyc01g006890.3 742 795 1184 945 1271 1223 1248 1348 1104 1030 1403 1339 1029 813 635 EEIG1/EHBP1 N-terminal domain (AHRD V3.3 *** A0A200Q9Q9_9MAGN) AT3G11760 Solyc01g006900.3 7783 5764 8034 7133 7284 7226 6753 6765 11502 10308 14772 12829 8085 7869 10391 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein (AHRD V3.3 *** A0A2U1NF61_ARTAN) AT5G06480 Solyc01g006910.4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1MY73_ARTAN) AT2G35910 Solyc01g006920.4 16 32 18 36 25 26 20 25 22 19 8 35 40 35 21 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XTB6_CAPBA) AT4G39530 Solyc01g006930.3 1334 751 410 800 169 239 233 160 493 713 514 481 899 755 685 Nuclear transcription factor Y subunit A-4 (AHRD V3.3 *** A0A2G2XTD6_CAPBA) AT5G06510 Solyc01g006940.4 351 669 574 644 981 824 885 924 815 628 683 826 443 595 651 RNA-binding protein CP33, chloroplastic (AHRD V3.3 *-* A0A1J3GQ27_NOCCA) AT3G52380 Solyc01g006950.3 326 102 89 50 0 4 0 1 14 71 50 7 112 223 53 syntaxin-121-like (AHRD V3.3 *** A0A2I4H4W7_9ROSI) AT3G11820 Solyc01g006960.3 1842 1514 1386 1629 1279 1453 1597 1339 1271 1513 1646 1212 1329 1431 1603 Trafficking protein particle complex subunit 8 (AHRD V3.3 *** A0A1J3IJK6_NOCCA) AT5G16280 Solyc01g006970.4 1842 1156 968 1034 963 1025 1072 1020 911 1147 783 917 887 1088 947 RNA helicase family protein (AHRD V3.3 *** A0A2U1PBZ9_ARTAN) AT2G35920 Solyc01g006980.4 756 1446 1032 908 1382 1305 1131 1713 1446 1107 880 1232 1418 1296 1115 Malonyl CoA-acyl carrier protein transacylase containing protein, expressed (AHRD V3.3 *** Q10MS3_ORYSJ) AT2G30200 Solyc01g006990.4 817 432 354 377 346 341 251 350 381 576 300 428 418 394 361 F-box family protein (AHRD V3.3 *** E5GBH4_CUCME) AT1G23780 Solyc01g007000.4 1 3 89 0 0 0 0 0 0 6 27 2 18 6 5 RING-type E3 ubiquitin transferase (AHRD V3.3 *** Q3HLY8_CAPAN) AT2G35930 Solyc01g007010.2 5 5 17 0 0 0 0 0 6 6 16 9 1 3 3 RING-type E3 ubiquitin transferase (AHRD V3.3 *** Q3HLY8_CAPAN) AT2G35930 Solyc01g007020.4 14 8 24 3 0 0 0 0 3 9 54 1 26 28 24 RING-type E3 ubiquitin transferase (AHRD V3.3 *** Q3HLY8_CAPAN) AT2G35930 Solyc01g007030.3 23 15 99 0 0 0 0 0 1 2 169 3 13 6 23 RING-type E3 ubiquitin transferase (AHRD V3.3 *** Q3HLY8_CAPAN) Solyc01g007040.4 61 64 192 14 0 0 0 1 3 35 366 26 31 57 86 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3AY39_CAPCH) Solyc01g007050.3 10 0 1 1 0 0 0 0 20 2 4 3 0 2 3 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3AY50_CAPCH) Solyc01g007060.3 399 407 682 603 521 598 710 579 539 403 657 492 398 479 506 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G3AY53_CAPCH) AT3G05675 Solyc01g007070.3 11973 7599 4501 7260 1171 1306 1172 837 4396 7115 8914 3224 8602 6612 14460 BEL1-like homeodomain protein 3 (AHRD V3.3 *** A0A2G3AY56_CAPCH) AT2G35940 Solyc01g007080.3 66 257 43 92 339 371 363 331 230 169 8 62 164 57 20 Aluminum-activated malate transporter (AHRD V3.3 *** A0A2U1PS47_ARTAN) Solyc01g007090.1 32 35 25 25 20 45 26 17 47 40 9 10 53 23 11 Aluminum-activated malate transporter (AHRD V3.3 *** A0A200Q9N0_9MAGN) Solyc01g007100.3 1739 1446 981 1249 1484 1549 1552 1503 1454 1198 873 1148 1383 1064 1176 Digalactosyldiacylglycerol synthase 1, chloroplastic (AHRD V3.3 *** A0A1U8EIN3_CAPAN) AT3G11670 Solyc01g007110.3 3609 1669 2917 1120 1347 1199 1067 1186 1267 2316 1969 1275 1654 1431 1361 LRAT-like domain (AHRD V3.3 *** A0A200Q9S3_9MAGN) AT5G06370 Solyc01g007120.3 614 681 364 398 407 459 417 515 543 383 309 535 814 652 492 Protein serine/threonine kinase (AHRD V3.3 *** F4J3A9_ARATH) AT3G51270 Solyc01g007130.3 1469 1436 1150 1895 2186 2032 1884 2316 1704 1422 1069 1600 1425 1334 2182 Receptor protein kinase (AHRD V3.3 *** A0A2R6R7M6_ACTCH) Solyc01g007140.3 298 450 254 340 327 251 235 331 320 200 271 246 491 512 365 ARM repeat superfamily protein (AHRD V3.3 *** AT5G06350.2) AT5G06350 Solyc01g007150.3 1978 2995 2107 2193 2719 2759 2929 3627 3024 2471 1765 2707 2546 2625 2263 Coatomer subunit beta (AHRD V3.3 *** A0A1U8EGF1_CAPAN) AT4G31490 Solyc01g007160.4 7 69 71 39 73 71 110 73 45 11 61 67 25 53 8 protein CHROMOSOME TRANSMISSION FIDELITY 7 (AHRD V3.3 *** A0A2I4GQF6_9ROSI) AT4G31400 Solyc01g007170.4 78 422 448 557 986 1026 971 1246 557 269 408 774 85 325 185 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061F065_THECC) AT3G03680 Solyc01g007180.3 169 133 135 103 93 71 68 84 71 90 198 108 126 98 108 Spc97/Spc98 family of spindle pole body (SBP) component (AHRD V3.3 *** A0A2K3MUW2_TRIPR) AT1G80245 Solyc01g007190.3 229 103 122 75 29 28 29 20 44 98 56 59 139 100 95 Unknown protein Solyc01g007200.2 155 266 546 609 736 683 630 681 183 399 276 543 162 326 141 Unknown protein Solyc01g007210.3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g007220.4 2731 1140 438 810 85 96 113 80 222 416 1823 162 787 1018 1610 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9SVC8_ARATH) AT3G52470 Solyc01g007230.4 358 679 663 545 627 458 433 674 528 466 432 579 628 506 246 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** A0A2U1KP17_ARTAN) AT5G06320 Solyc01g007240.3 0 0 12 0 0 0 1 1 0 0 0 0 0 0 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** O82294_ARATH) Solyc01g007250.4 882 1063 992 798 822 753 746 615 494 492 575 523 1215 1146 913 U3 small nucleolar ribonucleoprotein imp4 (BRIX domain-containing protein) (AHRD V3.3 *** A0A166XUR7_9PEZI) AT1G63780 Solyc01g007260.3 371 250 329 327 338 303 230 315 254 317 375 287 475 379 284 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KPR9_ARTAN) AT3G52490 Solyc01g007263.1 17 27 16 6 31 23 14 26 24 24 45 27 38 26 0 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** A0A0A1WDM2_NICAT) Solyc01g007267.1 70 94 54 84 90 95 91 120 82 74 59 90 76 73 48 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q9X6_9MAGN) AT3G49730 Solyc01g007740.4 436 598 476 525 669 601 630 760 632 588 379 605 590 566 412 2-Cys peroxiredoxin (AHRD V3.3 *** G1JT83_VITVI) AT5G06290 Solyc01g007750.3 572 431 524 682 577 596 623 511 397 861 572 531 301 362 439 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** O64685_ARATH) AT2G36000 Solyc01g007760.3 361 565 566 532 715 793 918 708 460 359 544 477 405 682 362 Transcription factor E2FA (AHRD V3.3 *** A0A2G2XS87_CAPBA) AT5G22220 Solyc01g007770.2 150 102 132 95 78 83 68 66 74 191 172 60 117 120 63 hypothetical protein (AHRD V3.3 *** AT5G06280.3) AT5G06280 Solyc01g007780.4 306 195 337 331 234 235 210 168 192 300 545 166 307 249 305 HVA22-like protein (AHRD V3.3 *** A0A2G3AY13_CAPCH) AT2G36020 Solyc01g007790.4 129 171 182 163 214 215 191 231 210 148 168 190 93 118 154 alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT3G11620.8) AT3G11620 Solyc01g007800.3 383 1056 800 1349 3136 2651 2241 2395 966 644 1136 1737 461 1058 552 ovate family protein 2 AT2G36026 Solyc01g007810.1 30 67 87 97 104 170 131 152 55 40 94 124 48 64 37 ovate family protein 3 AT2G36050 Solyc01g007830.2 11 0 2 15 0 6 1 2 5 3 5 1 2 5 0 Condensin complex subunit 2 (AHRD V3.3 *-* A0A2G3C0A3_CAPCH) Solyc01g007840.3 310 276 266 215 307 263 225 308 279 274 188 235 281 281 256 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1M9A7_ARTAN) Solyc01g007850.2 154 128 80 136 112 140 137 161 154 100 77 164 100 151 113 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QMV9_9MAGN) Solyc01g007860.3 4918 3708 4546 4178 4233 4755 4717 3810 2932 3296 4592 3453 3892 3726 5447 Ubiquitin-conjugating enzyme variant (AHRD V3.3 *** C8CP48_CITSI) AT3G52560 Solyc01g007870.3 583 1118 1197 1342 1952 1868 1581 1592 724 732 902 1310 982 848 408 hypothetical protein (AHRD V3.3 *** AT5G06270.2) AT3G11600 Solyc01g007880.4 325 419 379 354 428 347 433 351 415 289 284 371 327 397 246 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* D7KW77_ARALL) AT1G75010 Solyc01g007890.3 229 217 131 236 310 289 254 251 207 213 176 165 99 169 123 Protein indeterminate-domain 5, chloroplastic (AHRD V3.3 *-* A0A2G3AYF3_CAPCH) Solyc01g150101.1 45 27 17 145 0 0 0 0 8 8 7 0 27 5 29 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A1P8ASG1_ARATH) AT1G31050 Solyc01g007900.4 468 417 399 495 525 651 554 508 296 428 237 398 324 362 227 Tobamovirus multiplication protein 3 (AHRD V3.3 *** A0A2G3CF46_CAPCH) AT1G14530 Solyc01g007910.3 563 1328 962 986 1230 987 1073 1279 912 771 740 872 1678 1344 1116 succinyl-CoA ligase alpha 1 subunit AT5G23250 Solyc01g007920.2 238 170 190 160 206 177 160 134 182 192 237 148 208 183 214 Isochorismatase-like (AHRD V3.3 *** A0A200QJT4_9MAGN) AT5G23230 Solyc01g007930.4 4905 1114 1475 1662 837 907 871 804 882 1948 1788 1317 760 854 1421 F-box protein (AHRD V3.3 *** A0A2G2XSM3_CAPBA) AT1G70590 Solyc01g007940.4 0 0 0 0 3 1 0 0 0 0 0 4 0 0 0 Alanine aminotransferase 2 (AHRD V3.3 *** A0A2G2YVW4_CAPAN) Solyc01g007950.4 39 98 91 63 104 105 98 78 131 182 93 139 70 108 40 Peroxidase (AHRD V3.3 *** K4ASZ3_SOLLC) Solyc01g007960.3 12 17 8 4 0 0 0 0 0 3 0 0 105 70 30 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *** A0A2G2YVX5_CAPAN) AT1G70520 Solyc01g007970.2 15 2 0 11 0 0 0 0 0 0 0 0 8 18 9 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *** A0A2G2YVX5_CAPAN) AT1G70520 Solyc01g007980.4 382 259 203 305 26 20 25 12 85 183 93 89 496 332 313 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *** A0A2G2YVX5_CAPAN) AT1G70520 Solyc01g007990.4 922 596 912 285 169 173 208 161 283 389 423 211 920 607 418 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *** A0A2G2XSC5_CAPBA) AT1G70520 Solyc01g008000.3 2553 2567 2689 2516 2960 2865 2884 2927 2593 2837 2511 2365 3322 2466 2641 ADP-ribosylation factor (AHRD V3.3 *** A0A2U1LV56_ARTAN) AT1G10630 Solyc01g150102.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 TATA-box-binding protein (AHRD V3.3 *** A0A2G2XSN2_CAPBA) Solyc01g008010.3 343 373 447 430 482 446 498 398 469 384 425 396 484 358 430 DUF220 domain-containing protein (AHRD V3.3 *** A0A1Q3AZ34_CEPFO) AT1G70480 Solyc01g008020.4 734 721 973 982 829 952 954 902 890 1088 1111 1034 797 815 980 Equilibrative nucleotide transporter 1 (AHRD V3.3 *** A0A2G3AYC6_CAPCH) AT1G70330 Solyc01g008040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) Solyc01g008050.4 2 4 0 5 0 0 0 0 3 0 0 0 3 5 15 TRICHOME BIREFRINGENCE-LIKE 27 (AHRD V3.3 *** A0A2U1P3B7_ARTAN) AT1G70230 Solyc01g008060.3 2353 1742 1903 1770 1861 1829 1662 1603 1835 1536 1749 1632 1772 1890 1785 Ribonuclease H (AHRD V3.3 *** A0A2U1P3J3_ARTAN) AT1G24090 Solyc01g008070.3 1055 428 439 362 344 342 319 348 518 563 487 399 412 350 491 Plant/MCA23-20 protein (AHRD V3.3 *** G7LJD0_MEDTR) AT5G47860 Solyc01g008080.3 7099 7526 7559 6447 7624 8334 7925 6666 4473 4704 6602 5999 7794 7128 7689 40S ribosomal protein S27 (AHRD V3.3 *** S8E0G1_9LAMI) AT3G61110 Solyc01g008090.4 2717 5481 3856 3900 4800 4992 5319 5091 3046 3366 3119 3829 5715 5094 3401 40S ribosomal protein S27 (AHRD V3.3 *** S8E0G1_9LAMI) AT3G61110 Solyc01g008100.3 955 1432 1548 1773 1554 1272 1297 1327 1888 1826 1716 1912 1864 1647 1776 Transferring glycosyl group transferase (AHRD V3.3 *** Q8L9Q7_ARATH) AT4G14100 Solyc01g008110.4 3513 12637 5764 8775 10240 8190 7603 11120 21240 18532 11654 25385 14561 13406 6731 Cytochrome P450 (AHRD V3.3 *** A0A200R3Q9_9MAGN) AT1G11680 Solyc01g008120.4 2920 2443 2198 2249 1841 2231 2295 2171 2304 2096 1855 1844 2027 2421 2367 Histone acetyltransferase HAC12 (AHRD V3.3 *** A0A1U8E264_CAPAN) AT1G79000 Solyc01g008130.4 189 149 141 93 147 201 150 172 98 127 107 90 205 161 76 Glutaredoxin-related protein (AHRD V3.3 *** A0A2U1PBW7_ARTAN) AT3G11920 Solyc01g008140.4 1065 729 763 800 744 875 872 724 817 961 781 746 733 725 660 Phytosulfokine receptor 1 (AHRD V3.3 *** A0A2G2YWA1_CAPAN) AT2G02220 Solyc01g008150.1 0 1 6 0 1 3 0 5 1 0 0 0 1 1 12 Unknown protein Solyc01g008160.4 346 829 662 737 532 446 586 639 479 483 425 605 719 757 489 Protein SLOW GREEN 1, chloroplastic (AHRD V3.3 *** A0A2G2YVV0_CAPAN) AT3G18420 Solyc01g008170.3 1765 1435 1310 1191 1211 1368 1291 1403 1370 1207 1071 1333 1409 1512 1428 Zinc finger transcription factor 5 AT2G02160 Solyc01g008180.3 1341 1311 1453 1776 2382 2259 2423 2651 2036 1512 1635 2000 1265 1521 1400 Remorin (AHRD V3.3 *** A0A200QBN3_9MAGN) AT2G02170 Solyc01g008190.4 247 248 232 372 226 191 248 350 190 495 264 284 298 200 140 INO80 complex subunit D-like (AHRD V3.3 *-* A0A2K3PJC0_TRIPR) AT2G31600 Solyc01g008200.3 115 94 135 143 131 141 118 103 101 117 154 92 112 130 211 INO80 complex subunit D-like (AHRD V3.3 *-* A0A2I4G7W4_9ROSI) Solyc01g008220.3 308 215 242 151 146 186 158 131 142 143 165 138 74 134 225 UPF0664 stress-induced protein C29B12.11c (AHRD V3.3 *** A0A1J3H3L4_NOCCA) Solyc01g008230.4 941 1318 776 930 1556 1793 1767 1391 1247 864 1125 1069 994 749 812 TCP transcription factor 15 AT5G23280 Solyc01g008240.4 0 10 27 0 0 0 4 4 0 0 0 0 1 2 0 Sugar transporter protein 9 AT3G19940 Solyc01g008250.3 165 235 180 179 239 218 176 201 155 181 180 144 179 147 220 Thioredoxin (AHRD V3.3 *** A0A2U1L6U5_ARTAN) AT1G50320 Solyc01g008260.4 246 184 257 212 213 276 180 220 202 170 207 210 229 156 337 E2F-associated phosphoprotein (AHRD V3.3 *** A0A2I4ECY9_9ROSI) AT5G08320 Solyc01g008270.3 1341 1756 1806 1612 2092 2183 2001 1753 1381 1238 1981 1679 1644 1551 1933 Prefoldin subunit 5 (AHRD V3.3 *** B6TVU2_MAIZE) AT5G23290 Solyc01g008280.4 1478 1646 1075 1797 2001 1857 1985 2570 1342 1868 1181 1971 2012 2043 1364 Serine/threonine-protein phosphatase 2A activator (AHRD V3.3 *** A0A2G3AYA9_CAPCH) AT4G08960 Solyc01g008290.3 303 424 288 283 300 341 310 283 246 199 250 267 469 506 352 Dihydroorotate dehydrogenase (quinone), mitochondrial (AHRD V3.3 *** A0A1U8E220_CAPAN) AT5G23300 Solyc01g008300.2 23 39 23 55 19 21 20 10 93 74 22 79 42 43 13 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc01g008310.4 3187 3555 3372 3514 3739 3984 4114 3766 3026 2681 2771 2903 3587 3525 2948 Phenylalanine--tRNA ligase beta subunit (AHRD V3.3 *** A0A0G2HIH6_9PEZI) AT1G72550 Solyc01g008320.3 962 600 509 624 506 548 590 525 662 670 608 599 694 703 892 Shoot gravitropism 2 (SGR2) protein (AHRD V3.3 *** A0A072UJS6_MEDTR) AT1G31480 Solyc01g008330.4 406 1685 976 917 1846 1312 1515 2123 1418 947 682 1227 1470 1369 869 Biotin carboxylase (AHRD V3.3 *** B5LAS7_CAPAN) AT5G35360 Solyc01g008340.3 495 786 527 623 618 596 633 670 601 391 467 559 828 864 533 L19 ribosomal protein AT4G11630 Solyc01g008360.3 700 871 1006 845 1132 1366 1037 919 771 637 881 701 1055 1015 894 RNA binding protein (AHRD V3.3 *** B3TLZ0_ELAGV) AT5G12190 Solyc01g008370.3 9886 6094 6363 6150 5083 5367 5314 4765 4445 4861 5260 4759 5996 5531 5660 26S proteasome non-ATPase regulatory subunit 7 (AHRD V3.3 *** A0A2G3AYA8_CAPCH) AT5G05780 Solyc01g008400.3 34 51 46 17 62 40 50 28 36 32 48 24 53 47 108 Unknown protein Solyc01g008390.3 488 258 199 160 31 30 40 45 109 223 114 92 591 338 172 Hcr9-OR2C (AHRD V3.3 *** Q4VSU3_SOLPI) Solyc01g008410.3 164 60 51 52 19 16 10 11 24 58 63 13 182 104 113 Hcr9-OR2C (AHRD V3.3 *** Q4VSU3_SOLPI) Solyc01g008420.3 4 39 27 17 49 109 92 93 36 46 33 56 22 19 34 Protein DETOXIFICATION (AHRD V3.3 *** S6BP63_TOBAC) AT1G51340 Solyc01g008425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g008440.3 348 283 213 262 168 216 176 216 291 243 210 251 231 278 416 Calcium-dependent protein kinase (AHRD V3.3 *** B2KTB2_WHEAT) AT5G12480 Solyc01g008450.1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 2Fe-2S ferredoxin (AHRD V3.3 *-* A0A2G3AI40_CAPAN) Solyc01g008460.3 417 477 409 358 312 334 355 255 350 302 416 313 559 513 519 2Fe-2S ferredoxin (AHRD V3.3 *** A0A2G3B9S5_CAPCH) AT4G05450 Solyc01g008470.3 377 555 447 453 549 463 471 530 493 487 263 532 483 542 308 Translocation protein Sec62 (AHRD V3.3 *** A0A200QIN6_9MAGN) AT3G20920 Solyc01g150103.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150104.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g008473.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g008475.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150106.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g008477.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g008479.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g008480.4 601 346 251 313 203 250 291 243 310 323 250 240 241 358 387 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q273_9MAGN) AT2G01390 Solyc01g008490.4 306 225 198 300 186 191 160 170 288 245 254 258 222 263 317 Nuclear transcription factor Y subunit A-7 (AHRD V3.3 *** A0A2G2XP63_CAPBA) AT5G12840 Solyc01g008500.4 341 107 121 57 2 11 9 5 23 72 84 14 402 219 116 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3L8M9_TRIPR) Solyc01g008510.3 1 0 0 0 0 1 0 0 0 3 0 0 2 1 0 photosystem II 5 kDa protein, chloroplastic-like (AHRD V3.3 *-* A0A2I4GVV4_9ROSI) Solyc01g008520.3 347 166 164 156 95 103 108 110 149 302 179 191 197 189 155 Homolog of X-ray repair cross complementing 2 (XRCC2) (AHRD V3.3 *** A0A1P8BBF2_ARATH) AT5G64520 Solyc01g008530.3 1092 1219 1458 1271 1681 1484 1514 1401 1099 893 1107 1091 1284 1216 1498 phenylacetaldehyde reductase 1 AT1G51410 Solyc01g008540.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cinnamoyl-CoA reductase 1 (AHRD V3.3 *** A0A2G2XPA3_CAPBA) Solyc01g008550.4 2128 2274 2484 2298 2712 2602 2559 2670 2946 2681 2281 2676 3066 2283 2192 phenylacetaldehyde reductase 2 AT1G51410 Solyc01g008560.3 823 654 1005 606 448 416 418 478 562 804 628 445 742 790 581 NAD kinase (AHRD V3.3 *** F2Z9R4_NICBE) AT3G21070 Solyc01g008570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3N885_TRIPR) Solyc01g008580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc transporter protein (AHRD V3.3 *** A5BDR3_VITVI) Solyc01g008590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc transporter protein (AHRD V3.3 *-* A5BDR3_VITVI) Solyc01g008600.4 3510 7300 6539 8602 12146 12762 13722 12536 7117 5601 5611 9009 6300 7246 3633 Zinc finger transcription factor 6 AT5G12440 Solyc01g008610.4 1 0 0 1 0 0 0 0 0 0 0 0 0 0 5 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** E13D_TOBAC) Solyc01g008620.4 2204 1552 143 471 2 1 4 1 177 262 216 54 2413 3349 677 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A1U8FGD7_CAPAN) Solyc01g008640.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc01g008650.3 63 17 17 51 6 13 10 6 33 8 13 15 27 7 9 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc01g008660.4 402 262 173 162 207 165 134 186 186 228 91 206 190 182 155 F-box protein (AHRD V3.3 *** A0A2K3NCL9_TRIPR) AT4G12560 Solyc01g008670.4 154 104 176 146 39 15 18 12 128 185 444 188 97 120 114 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc01g008680.4 19 9 10 15 8 25 13 14 20 16 34 14 25 15 25 S2 self-incompatibility locus-linked pollen 3.2 protein (AHRD V3.3 *** Q7XAE8_PETIN) Solyc01g008690.3 1 0 6 5 0 0 0 0 1 1 1 0 3 2 0 GDP-mannose transporter (AHRD V3.3 *** A0A1B0VP09_ARATH) AT2G13650 Solyc01g008700.4 637 723 860 770 884 755 818 817 635 761 752 898 745 798 535 MutS2 (AHRD V3.3 *** AT2G26840.1) AT2G26840 Solyc01g008710.5.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mannan endo-1,4-beta-mannosidase Solyc01g008720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mannan endo-1,4-beta-mannosidase 4 (AHRD V3.3 *** MAN4_SOLLC) Solyc01g008730.3 504 397 332 365 354 418 339 415 432 358 397 342 485 419 375 BZIP transcription factor (AHRD V3.3 *** E9N3N2_9POAL) AT5G06950 Solyc01g008740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent protein kinase (AHRD V3.3 *** B2KTB3_WHEAT) AT5G12180 Solyc01g008760.4 154 165 169 149 216 197 177 187 174 169 158 139 202 140 243 mediator-associated protein 2-like (AHRD V3.3 *** A0A1U8E6W4_CAPAN) AT5G64680 Solyc01g008770.3 2343 2524 2089 2537 2492 2621 2627 2538 2487 2442 2092 2307 2446 2504 2398 Rho GTPase-activating protein 7 (AHRD V3.3 *** A0A2G3DEM8_CAPCH) AT5G19390 Solyc01g008780.3 1473 695 721 910 793 728 648 681 688 1008 616 675 752 595 939 Phospholipase A2 family protein (AHRD V3.3 *** AT4G29070.2) AT4G29070 Solyc01g008790.4 138 201 467 485 377 360 348 376 850 617 788 639 268 361 670 Non-specific phospholipase C6 (AHRD V3.3 *** A0A2G3DF85_CAPCH) AT2G26870 Solyc01g008800.3 827 514 540 531 165 160 193 129 420 394 537 255 367 493 603 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** F4KIC7_ARATH) Solyc01g008810.3 1623 1093 1322 1175 1492 1633 1548 1346 1029 1239 1666 1387 1186 1201 1109 RING/U-box superfamily protein (AHRD V3.3 *** AT5G19430.6) AT5G19430 Solyc01g008820.3 376 756 524 630 738 700 619 753 636 695 509 767 1127 771 327 signal peptide peptidase-like (AHRD V3.3 *** A0A2I4FPX2_9ROSI) AT2G03120 Solyc01g008830.2 926 715 663 1007 328 298 264 303 416 472 435 332 794 768 609 L-ascorbate oxidase (AHRD V3.3 *** A0A2G3AI57_CAPAN) AT5G21105 Solyc01g008840.3 1501 1370 911 1073 1128 904 1078 1231 1505 1053 913 1275 1741 1432 1086 COP9 signalosome complex subunit 2 (AHRD V3.3 *** A0A2G2XP81_CAPBA) AT2G26990 Solyc01g008850.3 2224 1462 2026 1467 483 493 569 692 1334 2371 2348 734 1340 1308 1135 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2XP60_CAPBA) AT2G26980 Solyc01g008860.1 0 0 4 1 0 0 0 1 0 0 7 4 1 0 0 Protein kinase APK1B, chloroplastic (AHRD V3.3 *** A0A2G3B9K0_CAPCH) Solyc01g008870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase APK1B, chloroplastic (AHRD V3.3 *** A0A2G3B9K0_CAPCH) Solyc01g008880.3 0 0 3 3 0 3 1 0 0 1 0 0 0 0 0 Solanum lycopersicum Cytokinin Response Factor 8 AT1G22985 Solyc01g008890.4 1040 694 758 680 789 767 753 588 601 498 748 562 749 697 924 Solanum lycopersicum Cytokinin Response Factor 3 Solyc01g008900.4 152 169 151 144 176 237 208 148 156 130 186 160 209 215 139 D-cysteine desulfhydrase 2, mitochondrial (AHRD V3.3 *** A0A2G3DF42_CAPCH) AT3G26115 Solyc01g008910.2 224 170 192 250 190 260 173 179 257 254 177 348 252 246 161 Transcription factor GRAS (AHRD V3.3 *** A0A200QIE7_9MAGN) AT1G50420 Solyc01g008920.4 80 86 43 57 47 42 40 52 55 54 50 35 59 75 61 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1L7S8_ARTAN) AT4G31530 Solyc01g008930.4 309 391 501 550 770 688 728 583 450 388 316 501 399 495 438 AUREA phytochromobilin synthase AT3G09150 Solyc01g008940.2 6 0 5 1 0 1 0 2 1 5 20 4 1 3 22 Unknown protein Solyc01g008950.4 3022 3346 3383 3569 4142 4427 4230 3693 3257 2659 3449 3061 3455 3385 3398 Calmodulin 1 Solyc01g008960.3 30742 23744 16758 19175 23895 21506 21407 29794 25731 32640 16262 30754 17877 19443 14334 Argonaute 4a AT2G27040 Solyc01g008970.4 15519 10713 8709 8075 8216 8257 7692 8196 9879 7967 7988 9143 8765 9323 7845 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4IIL5_ARATH) AT3G56860 Solyc01g008980.3 258 127 129 99 105 107 98 102 112 129 177 109 130 106 97 Abscisic acid-insensitive 5-like protein (AHRD V3.3 *-* A0A2K3P2S8_TRIPR) Solyc01g008990.4 450 456 478 345 513 468 433 359 409 329 349 388 555 434 382 THO complex subunit 7B (AHRD V3.3 *** A0A1U8H3F7_CAPAN) AT3G02950 Solyc01g009000.3 764 617 661 594 561 678 618 604 689 855 1001 639 751 642 664 RING/U-box superfamily protein (AHRD V3.3 *** A0A1I9LQQ9_ARATH) AT2G40830 Solyc01g009010.3 308 437 362 502 427 431 462 426 690 518 498 754 470 464 434 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase AT2G26930 Solyc01g009020.4 451 424 908 682 474 402 425 329 510 417 756 406 623 539 834 Cysteine proteinase inhibitor (AHRD V3.3 *** A0A059TCI1_TOBAC) AT2G40880 Solyc01g009030.4 664 1287 1258 1667 1765 2126 1750 1965 1233 1305 1487 1529 1369 1431 1294 dgd1 suppressor 1 (AHRD V3.3 *** AT5G12290.4) AT5G12290 Solyc01g009040.4 138 1296 1211 1975 3102 3183 3011 3549 1811 732 1258 2221 237 866 593 cyclinB1_4 AT4G37490 Solyc01g009050.3 1416 1110 943 961 729 622 822 883 1219 1192 910 1121 972 1121 881 Molybdopterin biosynthesis protein CNX1 (AHRD V3.3 *** A0A1U8HCP2_CAPAN) AT5G20990 Solyc01g009060.3 956 1034 860 884 912 969 1013 1048 824 913 650 953 968 829 645 BTB-POZ and MATH domain protein (AHRD V3.3 *** B9VXZ7_CAPAN) AT3G03740 Solyc01g009070.3 1061 874 1084 1222 1008 1280 1222 715 681 669 1251 770 604 802 1556 gamyb-like 1 AT3G11440 Solyc01g009080.4 171 392 76 223 504 462 439 507 229 231 99 180 248 111 79 Zeaxanthin epoxidase, chloroplastic (AHRD V3.3 *** A0A1J3K020_NOCCA) AT2G21530 Solyc01g009090.3 5232 4615 4072 3709 3794 3977 3881 3730 3515 3484 3649 3656 4108 4339 4316 Serrate RNA effector molecule (AHRD V3.3 *** A0A2G3AI64_CAPAN) AT2G27100 Solyc01g009100.4 991 4423 3781 3718 4798 4893 5207 3984 2262 1618 2681 2583 5541 4265 3573 60S ribosomal protein L30 (AHRD V3.3 *-* A0A2G2XP72_CAPBA) AT1G36240 Solyc01g009120.3 372 196 212 216 209 180 185 117 186 245 229 171 189 235 299 Histone deacetylase (AHRD V3.3 *** A0A2G2ZNY2_CAPAN) AT4G33470 Solyc01g009140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0Q1_CAPCH) Solyc01g009145.1 87 95 78 93 87 117 108 100 106 109 69 85 109 83 112 Glycosyl hydrolase (AHRD V3.3 *-* D9ZCD8_9CARY) Solyc01g009160.2 368 285 400 114 110 57 88 75 94 69 713 194 186 107 278 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q84VP8_ARATH) AT2G27080 Solyc01g009165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) Solyc01g009170.4 2792 1512 1130 1398 649 669 703 724 1276 1357 1054 938 1478 1413 1372 EIL-EIN3/EIL AT3G20770 Solyc01g009180.4 1157 1489 1135 1195 1006 1013 979 1173 1166 1081 811 964 1728 1564 1204 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (AHRD V3.3 *** A0A2G3DF96_CAPCH) Solyc01g009190.3 5 1 0 1 0 1 2 0 0 8 1 0 2 9 0 Double-stranded RNA-binding protein 1 (AHRD V3.3 *** A0A2G2XPP0_CAPBA) Solyc01g009200.4 71 89 332 205 153 146 113 76 151 105 372 95 59 159 378 inactive protein RESTRICTED TEV MOVEMENT 2-like (AHRD V3.3 *-* A0A2I4GKR2_9ROSI) AT5G20970 Solyc01g009210.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g009220.3 34 55 79 41 55 65 38 11 34 35 105 35 37 35 167 inactive protein RESTRICTED TEV MOVEMENT 2-like (AHRD V3.3 *** A0A2I4H6X9_9ROSI) AT5G20970 Solyc01g009230.4 682 968 536 708 786 765 767 913 861 546 494 624 756 828 684 sitiens AT2G27150 Solyc01g009240.4 2 12 17 6 18 17 22 33 24 4 11 15 5 7 15 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A2U1QCD6_ARTAN) Solyc01g009245.1 11 36 30 47 67 50 47 35 57 36 44 40 26 35 47 Chlororespiratory reduction 42 (AHRD V3.3 *** A0A0F7J401_9ROSI) AT5G20935 Solyc01g009250.3 4 7 19 17 13 8 6 10 13 4 17 4 19 13 10 hypothetical protein (AHRD V3.3 *** AT5G06380.1) Solyc01g009260.1 0 3 0 4 0 0 0 1 0 0 0 0 2 6 0 protein FAF-like, chloroplastic (AHRD V3.3 *** A0A2I4H6U5_9ROSI) AT5G22090 Solyc01g009270.1 5 3 10 8 0 0 0 0 0 7 0 0 0 3 26 protein FAF-like, chloroplastic (AHRD V3.3 *** A0A2I4H6U5_9ROSI) AT5G22090 Solyc01g009280.4 1223 1039 958 1101 940 1052 1073 1058 1164 918 1043 930 1028 1184 1146 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A2G2XPM1_CAPBA) Solyc01g009290.4 1947 1046 797 867 676 721 640 639 796 896 744 706 1006 1074 859 Protein CLP1 homolog (AHRD V3.3 *** A0A2G2XPN7_CAPBA) AT3G04680 Solyc01g009300.3 650 584 1037 990 519 620 560 449 853 693 1654 575 548 685 2432 Serine/threonine-protein kinase Nek2 (AHRD V3.3 *** A0A2G2XPS8_CAPBA) AT3G44200 Solyc01g009305.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g009310.3 5280 5597 4660 4021 3964 3352 3949 4086 4780 7281 3807 4144 10981 5575 4229 meloidogyne-induced giant cell protein DB217 AT1G50430 Solyc01g009320.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3DFC2_CAPCH) Solyc01g009330.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8EN04_CAPAN) Solyc01g009340.4 506 645 1115 614 1283 1390 1208 981 797 464 851 678 623 709 384 SUN-domain protein2 Solyc01g009350.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1M9A7_ARTAN) Solyc01g009360.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1M9A7_ARTAN) Solyc01g009370.2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1MC34_ARTAN) Solyc01g009380.3 486 437 586 385 389 410 441 397 426 416 469 465 511 614 593 Nicalin (AHRD V3.3 *** A0A1Q3D0I4_CEPFO) AT3G44330 Solyc01g009390.4 1351 910 664 1116 723 713 721 826 582 1328 616 961 1017 924 723 mRNA-decapping enzyme-like protein (AHRD V3.3 *** A0A2G2XQ62_CAPBA) AT1G08370 Solyc01g009400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4ATD6_SOLLC) AT5G22410 Solyc01g009410.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4ATD7_SOLLC) AT5G22410 Solyc01g009420.4 4379 4753 4577 3640 3674 3179 3582 3459 5131 4572 6449 3534 6652 4095 5295 UDP-apiose/UDP-xylose synthase (AHRD V3.3 *** A0A1B3TP38_SPIPO) AT1G08200 Solyc01g009430.3 2066 1569 805 830 306 225 241 236 918 1622 1340 355 416 744 1942 hypothetical protein (AHRD V3.3 *** AT2G27830.1) AT2G27830 Solyc01g009440.3 0 3 0 0 0 0 3 0 1 2 0 3 0 2 0 Dehydration-responsive element-binding protein 1B (AHRD V3.3 *** A0A2G2XQ55_CAPBA) Solyc01g009443.1 2306 1695 1233 1693 1218 1203 1353 1277 1130 1578 1163 1226 1403 1243 1733 Mitochondrial inner membrane protease ATP23 (AHRD V3.3 *** A0A2G3DGC1_CAPCH) AT3G03420 Solyc01g009447.1 464 1486 1367 923 1320 1440 1317 1274 807 707 883 867 1967 1438 1085 60S acidic ribosomal protein family (AHRD V3.3 *-* F4IGR3_ARATH),Pfam:PF00428 Solyc01g009470.2 24 1 29 4 0 0 0 0 5 5 1 9 0 20 17 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A2G2XQ99_CAPBA) AT5G22470 Solyc01g009480.4 2 0 33 0 4 0 5 3 0 6 6 4 1 2 4 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4J341_ARATH) Solyc01g009490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF4228 domain-containing protein (AHRD V3.3 *** A0A1Q3CT45_CEPFO) Solyc01g009500.4 191 199 182 251 212 184 170 183 234 178 299 156 163 179 219 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4J341_ARATH) AT3G44510 Solyc01g009505.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g009510.2 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 Abscisic acid responsive elements-binding factor 2 (AHRD V3.3 --* A0A1P8AV75_ARATH) Solyc01g009520.4 1629 2511 2317 1691 2274 2092 2132 2059 1733 1491 1712 1560 2814 2578 2504 Ribosomal protein (AHRD V3.3 *** Q6ER67_ORYSJ) AT1G08360 Solyc01g009530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 plant/protein (AHRD V3.3 *-* AT5G43400.1) Solyc01g009540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant/T31B5-30 protein (AHRD V3.3 *-* A0A2K3PGR9_TRIPR) Solyc01g009550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc01g009560.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terminal flower 1 (AHRD V3.3 *** A0A2Z4I2Q4_CITLI) AT5G62040 Solyc01g009565.1 503 473 582 762 609 736 691 518 892 765 797 875 454 549 418 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8E178_CAPAN) Solyc01g009580.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terminal flower 1 (AHRD V3.3 *** A0A2Z4I2Q4_CITLI) AT5G62040 Solyc01g009590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stamen-specific protein FIL1 (AHRD V3.3 *** A0A2G3AJI0_CAPAN) AT5G52160 Solyc01g009600.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1NM08_ARTAN) Solyc01g009610.3 666 753 586 566 681 705 672 667 841 693 819 650 739 625 585 Protein phosphatase inhibitor 2-like (AHRD V3.3 *** A0A2K3NNM1_TRIPR) AT5G52200 Solyc01g009620.3 295 457 458 397 519 583 490 405 326 210 393 345 456 436 403 Cleavage and polyadenylation specificity factor subunit 5 (AHRD V3.3 *** A0A2G2XQG1_CAPBA) AT4G25550 Solyc01g009630.3 1678 1136 1153 1030 1122 1075 972 1025 825 730 882 944 1275 1102 904 Cleavage and polyadenylation specificity factor subunit 5 (AHRD V3.3 *** A0A1U8G7I4_CAPAN) AT4G25550 Solyc01g009640.3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1KXQ2_ARTAN) Solyc01g009650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB transcription factor (AHRD V3.3 *-* B4FNQ6_MAIZE) Solyc01g009660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 Low-temperature-induced 65 kDa protein (AHRD V3.3 *** A0A1J3DLF3_NOCCA) Solyc01g009670.4 152 132 90 106 114 136 158 132 77 58 81 72 51 123 68 Poly(A) polymerase I (AHRD V3.3 *** A0A1J3JYV1_NOCCA) AT5G23690 Solyc01g009690.3 440 90 40 80 0 3 0 0 17 59 30 0 115 197 108 SC0A (AHRD V3.3 *** Q9ZS79_SOLLC) Solyc01g009700.3 136 51 11 83 0 6 10 4 53 59 90 6 30 91 131 NL0E (AHRD V3.3 *** Q9ZS81_SOLLC) Solyc01g009705.1 23 0 1 24 0 1 3 0 0 11 2 0 1 18 36 Unknown protein Solyc01g009710.1 0 0 0 0 0 0 0 0 0 3 0 0 1 0 0 Unknown protein Solyc01g009720.2 6 30 13 9 34 47 55 33 14 27 28 39 29 19 33 E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *-* A0A2I0WFP3_9ASPA) AT5G13250 Solyc01g009730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein TIFY 9-like (AHRD V3.3 *-* A0A2I4HSS0_9ROSI) Solyc01g009735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein TIFY 9-like (AHRD V3.3 *** XP_025884767.1) Solyc01g009740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 jasmonate-zim-domain protein 10 (AHRD V3.3 *-* AT5G13220.3) Solyc01g009750.3 5344 4021 3114 3625 4611 3424 3885 4725 3067 4579 2904 4325 3645 3490 2547 cysteine-rich and transmembrane domain-containing protein WIH2 (AHRD V3.3 *-* XP_004228441.1) Solyc01g009760.3 20 82 122 94 221 253 266 240 50 49 62 101 46 59 87 GRAM domain family protein (AHRD V3.3 *** A0A2U1NIK8_ARTAN) Solyc01g009770.3 100 348 318 250 527 569 625 553 280 211 226 337 261 250 114 ATP-dependent RNA helicase (AHRD V3.3 *** Q5HZ54_ARATH) AT2G33510 Solyc01g009780.3 813 517 623 539 404 400 398 451 463 685 613 429 632 451 447 GSH-induced LITAF domain protein (AHRD V3.3 *** GILP_ARATH) AT5G13190 Solyc01g009790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g009795.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g009810.3 30 27 11 2 0 0 0 0 1 23 0 0 149 64 3 Leucine-rich repeat protein (AHRD V3.3 *** A5HKK5_TOBAC) Solyc01g009820.4 2204 1356 1615 1670 1155 901 1072 982 922 1502 1537 1053 1544 1417 1195 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** A0A1P8AYF9_ARATH) AT2G33490 Solyc01g009830.3 0 1 0 1 6 1 1 2 1 5 3 0 1 2 0 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2U1NJJ9_ARTAN) AT4G32272 Solyc01g009840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor GRAS (AHRD V3.3 *-* A0A2U1QPG0_ARTAN) Solyc01g009850.4 379 780 841 917 1077 1126 1104 931 642 569 756 749 882 823 731 hypothetical protein (AHRD V3.3 *-* AT1G27435.1) Solyc01g009860.3 1841 932 901 546 286 235 154 227 598 686 933 309 1333 1159 872 NAC domain-containing protein (AHRD V3.3 *** A0A2K3LZ45_TRIPR) AT5G13180 Solyc01g009870.3 30 22 2 20 8 9 14 5 9 11 62 2 5 11 50 Glycerophosphodiester phosphodiesterase (AHRD V3.3 *** B6T3E4_MAIZE) Solyc01g009880.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1S6GXB5_TOBAC) AT5G13150 Solyc01g009890.1 0 2 1 14 7 7 2 1 4 4 3 2 1 5 0 Glutaredoxin (AHRD V3.3 *** A0A2G9G4Q3_9LAMI) AT3G02000 Solyc01g009900.3 2 26 39 12 22 34 19 29 28 7 24 10 0 10 3 Glutaredoxin (AHRD V3.3 *** A0A1R3H2Z3_COCAP) AT3G02000 Solyc01g009910.1 2 2 4 0 0 8 4 0 8 1 5 4 0 0 0 Glutaredoxin (AHRD V3.3 *** A0A1R3H2Z3_COCAP) AT3G02000 Solyc01g009920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (AHRD V3.3 *** A0A1P8BEQ3_ARATH) Solyc01g009930.3 17 1 0 0 0 0 0 0 1 2 0 2 5 46 5 receptor-like protein 12 (AHRD V3.3 *** A0A1U8F9L9_CAPAN) Solyc01g009940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5-methylthioadenosine/S-adenosylhomocysteine deaminase (AHRD V3.3 *** A0A2V4VVN3_PAEBA) Solyc01g009960.4 2 4 0 0 0 0 0 0 1 0 0 0 3 5 0 Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *** A0A2I4GZ93_9ROSI) Solyc01g009970.3 214 474 571 586 686 619 687 608 577 456 571 534 512 573 565 Hydrolase (AHRD V3.3 *** A0A2U1P3E1_ARTAN) AT2G35450 Solyc01g009975.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc01g009980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VMT6_9ASPA),Pfam:PF14223 Solyc01g009990.3 1118 3353 1827 2539 3652 3710 3711 3703 2664 1910 1950 2933 2373 2776 1791 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2G3DGA1_CAPCH) AT5G13120 Solyc01g010000.3 164 376 97 240 266 231 232 232 453 204 112 126 244 226 132 ACT domain-containing protein (AHRD V3.3 *** A0A1Q3BTU5_CEPFO) Solyc01g010020.3 189 80 159 95 36 39 21 35 66 116 92 44 93 103 62 Calmodulin (AHRD V3.3 *** B6SJJ2_MAIZE) AT3G25600 Solyc01g010030.3 1291 1355 1041 2928 1264 1145 2019 1895 1171 3058 1244 1699 1332 1495 836 Proline-rich receptor-like protein kinase PERK13 (AHRD V3.3 *-* A0A2G3AJ74_CAPAN) AT1G68690 Solyc01g010050.3 5133 2043 2318 2763 2492 2703 2737 2336 2737 3972 2848 2506 1655 2224 2325 S-adenosylmethionine decarboxylase 3 AT3G25570 Solyc01g010060.2 174 51 96 35 6 0 2 0 10 30 231 10 99 101 64 Unknown protein Solyc01g010063.1 0 0 0 0 0 0 0 0 1 2 0 1 3 0 0 Unknown protein Solyc01g010065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc01g010067.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *** A0A2K3N0D4_TRIPR) Solyc01g010080.3 5 11 7 5 8 0 1 3 7 2 0 0 4 7 2 Potassium channel AKT1 (AHRD V3.3 *** A0A2G3AJ60_CAPAN) AT4G32650 Solyc01g150108.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150109.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g010130.4 1099 1103 1417 1109 903 1197 1330 939 1253 768 1079 822 1374 1457 1341 bHLH transcription factor 001 AT1G68920 Solyc01g010140.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 18S pre-ribosomal assembly protein gar2-like protein (AHRD V3.3 *** AT2G03810.7) Solyc01g010150.3 273 403 521 392 1090 1132 1157 1120 533 349 735 684 515 544 321 ACT domain-containing protein (AHRD V3.3 *** A0A2U1MM44_ARTAN) AT1G69040 Solyc01g010160.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-glucosidase 34 (AHRD V3.3 *-* A0A2G3DFM9_CAPCH) Solyc01g010170.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 beta-glucosidase 40 (AHRD V3.3 --* XP_004228406.1) Solyc01g010175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc01g010180.3 1185 899 776 723 147 199 161 155 571 2155 409 408 3286 843 503 Unknown protein Solyc01g010185.1 6540 3499 4146 3378 1967 1396 1444 1443 2675 3883 3665 1601 8419 3479 3407 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MSD0_TRIPR) Solyc01g010210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g010215.1 1340 1548 1678 1489 1908 1066 1215 1608 1050 1302 1081 629 2432 1700 1015 UBN2 domain-containing protein (AHRD V3.3 *-* A0A1Q3DGW3_CEPFO) Solyc01g010220.3 313 305 463 250 198 129 131 154 153 207 290 143 586 289 261 Copia-like polyprotein/retrotransposon (AHRD V3.3 --* Q9FI33_ARATH) Solyc01g010230.2 2561 1597 2473 1900 787 697 703 855 1355 2082 1676 867 3044 2081 1608 MDIS1-interacting receptor like kinase 2 (AHRD V3.3 --* XP_024448779.1) Solyc01g010240.3 110 169 26 157 10 18 6 12 0 62 2 37 5 59 0 CRABS CLAW a AT1G69180 Solyc01g010250.4 333 387 299 265 211 217 183 190 205 244 225 261 590 406 366 6-phosphogluconolactonase (AHRD V3.3 *** B6U0H2_MAIZE) AT1G13700 Solyc01g010260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome 93A3 (AHRD V3.3 *** A0A1U8H5Z8_CAPAN) AT5G06900 Solyc01g010270.3 1290 839 1076 1200 767 779 864 814 1044 1328 1178 933 1038 823 1297 Protein SPIRAL1 (AHRD V3.3 *** A0A2G3DFN1_CAPCH) Solyc01g010280.3 0 0 0 0 0 0 4 0 1 2 0 1 0 0 0 suppressor SRP40-like protein (AHRD V3.3 *-* AT2G03630.1) AT1G69280 Solyc01g010290.4 1028 720 603 795 599 514 577 490 649 780 846 503 841 677 931 Ureide permease (AHRD V3.3 *** A0A2R6PBP7_ACTCH) AT2G03530 Solyc01g010310.4 606 1902 1380 1701 3322 3191 3397 3098 1413 1026 1964 1684 1496 1357 1015 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *** A0A1P8AZV6_ARATH) AT1G13830 Solyc01g010350.4 5 0 15 19 24 16 7 18 3 16 22 25 0 5 1 triose phosphate/phosphate translocator, chloroplastic-like (AHRD V3.3 *** A0A2I4H880_9ROSI) Solyc01g010360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14-3-3 protein (AHRD V3.3 *** A0A200R871_9MAGN) Solyc01g010365.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g010370.3 142 299 377 427 330 543 493 449 359 257 356 365 227 320 176 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1P6Q5_ARTAN) AT2G03480 Solyc01g010390.3 40 150 185 190 442 329 371 365 189 136 189 214 120 166 234 Beta-glucosidase 34 (AHRD V3.3 *** A0A2G3DFM9_CAPCH) AT1G26560 Solyc01g010400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1M803_ARTAN) Solyc01g010405.1 0 1 0 2 2 0 0 1 0 0 0 1 0 0 6 Plant transposase (Ptta/En/Spm family) (AHRD V3.3 *-* F4I6H5_ARATH) Solyc01g010410.3 17 13 15 30 3 11 3 14 12 22 25 19 34 7 46 Zinc finger protein (AHRD V3.3 *** A0A200PRD7_9MAGN) AT1G26610 Solyc01g010415.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc01g010420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin cross-linking protein (DUF569) (AHRD V3.3 *** Q9XIF7_ARATH) Solyc01g010430.4 298 82 98 87 41 35 28 38 67 133 134 57 65 90 72 Actin cross-linking protein, putative (DUF569) (AHRD V3.3 *** Q8GXC9_ARATH) Solyc01g010440.4 3253 2357 2009 1392 1515 1415 1312 1722 2005 2189 1696 1974 1924 1895 1874 Glycine-rich protein (AHRD V3.3 *** Q9LFX8_ARATH) AT1G27090 Solyc01g010460.4 207 242 166 150 128 181 154 160 166 136 115 154 164 207 137 5'-AMP-activated protein kinase subunit beta-2 (AHRD V3.3 *** A0A1J3EBW5_NOCCA) Solyc01g010470.2 201 229 150 362 189 179 240 168 146 188 146 193 131 188 218 5'-AMP-activated protein kinase subunit beta-2 (AHRD V3.3 *-* A0A1J3HGR2_NOCCA) Solyc01g010480.3 155 67 83 333 39 33 19 37 116 78 102 27 133 199 364 Protein TWIN LOV 1 (AHRD V3.3 *** A0A2G3AIG6_CAPAN) AT2G02710 Solyc01g010490.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1NH79_ARTAN) AT4G31500 Solyc01g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc01g010500.3 5 0 1 0 0 0 1 2 3 0 0 0 4 3 25 EIN3-binding F-box protein 1 (AHRD V3.3 *-* A0A2G2WKD4_CAPBA) Solyc01g010510.4 77 95 61 51 36 36 42 76 57 55 18 45 35 86 86 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2X910_CAPBA) AT1G26900 Solyc01g010520.3 1391 1170 1523 1449 1642 1722 1734 1578 1650 1326 1565 1516 1247 1280 1825 Helicase with zinc finger protein (AHRD V3.3 *** B3H5Y3_ARATH) AT2G46420 Solyc01g010530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sugar transporter protein 5 AT5G26250 Solyc01g010540.3 972 2205 1724 1449 2252 1902 1866 1950 1392 1074 1391 1357 2457 1920 1570 40S ribosomal protein S9 (AHRD V3.3 *** A0A1U8EPE0_CAPAN) AT5G39850 Solyc01g010550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g010570.4 1360 978 815 782 747 749 672 611 668 707 721 754 983 872 933 Mucin-related protein (AHRD V3.3 *** A0A2U1LU51_ARTAN) AT2G02880 Solyc01g010580.3 6250 5640 4780 3625 3896 3371 3034 3296 3234 3145 3195 3035 5253 4287 4710 40S ribosomal protein S9 (AHRD V3.3 *** A0A1U8EPE0_CAPAN) AT5G39850 Solyc01g010590.2 378 432 509 492 611 447 492 418 495 571 633 448 474 558 682 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A1U8HBC6_CAPAN) AT1G26940 Solyc01g010600.4 60 31 21 14 220 258 257 266 39 9 56 81 25 20 8 Homeobox-leucine zipper protein HOX21 (AHRD V3.3 *** A0A1U8ELC5_CAPAN) Solyc01g010640.3 784 443 267 1105 566 419 1119 938 275 1157 293 369 367 368 211 NAD(P)-linked oxidoreductase superfamily protein (AHRD V3.3 *** Q949S6_ARATH) AT1G14345 Solyc01g010650.3 989 657 767 711 553 717 643 542 665 876 836 914 657 684 960 UDP-galactose UDP-glucose transporter 3-like protein (AHRD V3.3 *** A0A2K3NS07_TRIPR) AT1G14360 Solyc01g010660.3 505 306 686 285 171 212 163 186 316 392 515 193 300 274 393 Protein kinase 2B, chloroplastic (AHRD V3.3 *** A0A2G3AIH7_CAPAN) AT2G02800 Solyc01g010670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g010690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Quinoprotein alcohol dehydrogenase-like superfamily (AHRD V3.3 *** A0A2U1NBT6_ARTAN) Solyc01g010700.3 909 572 623 786 342 376 342 200 538 779 693 542 701 738 1575 SNF1-related protein kinase regulatory subunit gamma-1-like (AHRD V3.3 *** A0A2G3DFN0_CAPCH) AT1G69800 Solyc01g010705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc01g010710.4 124 156 209 144 210 230 196 201 243 151 151 221 112 93 264 Carboxypeptidase (AHRD V3.3 *** A0A2I4FWA2_9ROSI) Solyc01g010720.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carboxypeptidase (AHRD V3.3 *** A0A2I4FWA2_9ROSI) Solyc01g010740.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectate lyase (AHRD V3.3 *** A0A2G3DIQ3_CAPCH) Solyc01g010750.4 18135 12560 11318 12815 10765 8974 8625 12254 14824 16067 11365 13560 12235 11574 13251 Ricin B lectin domain (AHRD V3.3 *-* A0A200Q0G6_9MAGN) AT2G39050 Solyc01g010755.1 0 12 1 5 5 12 14 11 1 3 8 1 0 0 15 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc01g010760.3 1511 2100 2057 1711 2288 1974 1972 2153 1711 1847 1576 2071 2941 2093 1475 Mitochondrial outer membrane protein porin (AHRD V3.3 *** A0A2K3KY08_TRIPR) AT3G01280 Solyc01g010780.4 2308 1698 2598 2280 1880 1918 2043 1636 1822 1685 3018 1588 1915 2245 2510 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1NYF7_ARTAN) AT5G15080 Solyc01g010785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VDL0_9ASPA) ATMG00810 Solyc01g010810.4 241 231 249 210 155 162 176 215 206 177 131 172 252 213 223 Ran-interacting Mog1 protein (AHRD V3.3 *** A0A200QSC1_9MAGN) AT1G69680 Solyc01g010820.3 951 1197 869 977 1075 1131 1044 1125 1369 975 771 926 1399 1307 1085 Cullin (AHRD V3.3 *** A0A2U1PKA1_ARTAN) AT1G26830 Solyc01g010830.4 329 445 306 413 343 411 384 447 361 319 395 285 383 396 432 Haloacid dehalogenase-like hydrolase-like protein (AHRD V3.3 *** Q6Z026_ORYSJ),Pfam:PF13419 AT1G14310 Solyc01g010840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g010860.3 682 408 477 446 376 354 356 323 355 481 534 391 406 344 432 Sphinganine C(4)-monooxygenase 1 (AHRD V3.3 *** A0A2G3DFM4_CAPCH) AT1G69640 Solyc01g010870.3 1808 1644 1301 1411 1393 1414 1498 1137 1410 1076 1338 1059 1740 1557 1626 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1LK68_ARTAN) AT1G26850 Solyc01g010880.3 226 252 273 299 285 309 331 236 254 318 310 305 277 260 218 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NXA0_ARTAN) Solyc01g010890.4 0 0 0 3 0 0 2 0 0 0 0 0 0 0 0 Expansin (AHRD V3.3 *** K4ATT2_SOLLC) Solyc01g010900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200QEP7_9MAGN) AT1G69500 Solyc01g010910.2 145 200 247 213 51 100 61 97 147 193 306 186 129 196 66 MYB transcription factor (AHRD V3.3 *-* A0A0U3IU11_MESCR) Solyc01g010920.2 108 121 188 165 145 195 234 138 103 81 93 73 104 168 148 O-fucosyltransferase (AHRD V3.3 *-* A0A2P5G0B7_TREOI) Solyc01g010930.4 51 69 50 78 60 84 66 70 68 42 57 93 54 48 50 O-fucosyltransferase family protein (AHRD V3.3 *** A0A2U1NIF6_ARTAN) Solyc01g010940.3 286 429 487 354 449 335 350 432 415 377 367 450 514 405 269 Transmembrane emp24 domain-containing protein p24delta7 (AHRD V3.3 *** A0A2G3AIH0_CAPAN) AT1G26690 Solyc01g010950.3 673 447 410 338 260 291 344 302 377 467 404 348 426 380 439 MAP kinase kinase kinase 2 AT1G14000 Solyc01g010960.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 60S ribosomal protein L35-like (AHRD V3.3 *-* A0A2I4GBA7_9ROSI) Solyc01g010970.3 219 532 507 521 454 570 426 557 466 407 562 685 305 519 435 Argonaute7 AT1G69440 Solyc01g010990.2 103 131 177 133 169 169 142 147 142 133 114 109 153 153 212 Son of sevenless protein (AHRD V3.3 *** Q9LQY7_ARATH) AT1G69430 Solyc01g011000.3 2861 4570 3245 2741 2888 2743 2975 3254 2578 2415 2123 2405 6555 4691 3731 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A1U8HES8_CAPAN) AT1G13950 Solyc01g011005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc01g011020.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g011030.3 511 423 434 454 524 453 468 431 276 313 436 421 403 467 417 RING/U-box superfamily protein (AHRD V3.3 *** A0A2K3MXG0_TRIPR) Solyc01g011040.3 824 1365 1306 1416 1554 1490 1427 1582 1264 1280 1215 1351 1332 1285 1204 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A2R6RFK8_ACTCH) AT5G61240 Solyc01g011050.3 0 10 53 0 0 0 17 9 0 0 0 0 0 1 0 leucine rich repeat protein Solyc01g011060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* O79414_SOLTU) Solyc01g011070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g011080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g011090.4 104 103 57 63 116 64 59 95 162 109 118 110 83 122 92 Phospholipid-transporting ATPase (AHRD V3.3 *-* A0A1U8GCQ9_CAPAN) Solyc01g011100.2 1559 1385 1620 1554 1089 1258 1426 1091 1756 1462 1819 1572 1517 1720 1595 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A1U8GCQ9_CAPAN) Solyc01g011105.1 25 19 43 65 77 93 91 77 29 42 86 65 34 35 84 CLAVATA3/ESR (CLE)-related protein 25-like (AHRD V3.3 *-* A0A2I4EI69_9ROSI) Solyc01g011110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g011113.1 0 4 0 0 0 0 0 0 0 0 0 0 0 2 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc01g011115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1S4D538_TOBAC) Solyc01g011117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein TIFY 9-like (AHRD V3.3 --* XP_025884767.1) Solyc01g011170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein TIFY 9-like (AHRD V3.3 *** XP_025884767.1) Solyc01g011180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sec1 family domain-containing protein MIP3 (AHRD V3.3 *-* A0A2G2VRM5_CAPBA) Solyc01g011190.1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 Sec1 family domain-containing protein MIP3 (AHRD V3.3 *-* A0A2G3BC24_CAPCH) Solyc01g011200.3 35 15 5 66 26 16 24 10 19 15 41 21 10 17 17 aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1S4D538_TOBAC) Solyc01g011220.3 24 16 6 8 3 10 18 9 15 11 4 17 2 4 7 Aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1J6IK01_NICAT) Solyc01g011230.3 5 3 10 5 7 5 5 5 3 5 9 13 1 2 18 Eukaryotic aspartyl protease family protein (AHRD V3.3 *-* Q0WQ50_ARATH) Solyc01g011260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1J6IK01_NICAT) Solyc01g011270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1J6IK01_NICAT) Solyc01g011273.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g011277.1 0 1 1 0 0 2 0 0 1 0 0 1 1 0 0 High mobility group B protein 10 (AHRD V3.3 *-* A0A2G2X5K3_CAPBA) Solyc01g011300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1J6IK01_NICAT) Solyc01g011310.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1S4C1I7_TOBAC) Solyc01g011320.2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1S4D538_TOBAC) Solyc01g011330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1J6IK01_NICAT) Solyc01g150114.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 --* AT1G08210.2) Solyc01g150115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc01g011340.3 1179 1117 1317 1358 1456 1493 1514 1433 1302 1070 1307 1251 1409 1350 1348 protein phosphatase 2A catalytic subunit 2 AT1G10430 Solyc01g011350.3 1139 652 775 672 799 978 897 688 710 509 685 752 482 707 707 DUF3755 domain-containing protein (AHRD V3.3 *** A0A1Q3D9X4_CEPFO) AT1G60670 Solyc01g011352.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0WBP1_9ASPA) Solyc01g011354.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0WDP9_9ASPA) Solyc01g011356.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G2W4T7_CAPBA) Solyc01g011358.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0WP97_9ASPA) Solyc01g011390.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 basic-leucine zipper transcription factor A (AHRD V3.3 *-* XP_021809091.1) AT5G35090 Solyc01g011410.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *-* A0A1U8QCJ3_CAPAN) Solyc01g011413.1 0 4 0 0 0 0 0 0 1 0 0 0 0 1 0 Unknown protein Solyc01g011417.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP47 reaction center protein (AHRD V3.3 *-* A0A140JZJ0_GYMST) Solyc01g011430.4 309 89 115 46 187 190 169 237 84 183 73 75 30 98 41 O-acyltransferase WSD1-like (AHRD V3.3 *** A0A2I4EG31_9ROSI) AT3G49210 Solyc01g011435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like protein 1 (AHRD V3.3 *** A0A1U8FEJ7_CAPAN),Pfam:PF00304 Solyc01g011460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 Unknown protein Solyc01g011465.1 1 0 1 4 7 1 0 0 1 4 4 0 1 5 0 Unknown protein Solyc01g011470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kirola (AHRD V3.3 *-* A0A2U1MSV5_ARTAN) Solyc01g011480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2G2VUH1_CAPBA) Solyc01g011490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 O-acyltransferase WSD1-like (AHRD V3.3 *-* A0A2I4EG31_9ROSI) Solyc01g011495.1 4 3 5 2 0 0 1 0 1 0 6 0 6 1 11 Defensin-like protein 1 (AHRD V3.3 *** A0A1U8FEJ7_CAPAN),Pfam:PF00304 Solyc01g011500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g011510.4 249 282 386 365 226 155 145 117 701 465 447 392 372 339 572 Aldehyde dehydrogenase (AHRD V3.3 *** A0A200Q0A3_9MAGN) Solyc01g011520.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g011530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g011540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g012540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g012550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0Q1_CAPCH) Solyc01g012560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0Q1_CAPCH) Solyc01g012570.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g012580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g012585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VHP9_9ASPA) Solyc01g012590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0R0_CAPCH) Solyc01g012610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2VE65_CAPBA) Solyc01g012650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g012670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g012680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0Q1_CAPCH) Solyc01g012690.1 0 0 0 0 0 0 0 0 0 2 1 0 0 1 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8DTH8_CAPAN) Solyc01g012700.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldehyde dehydrogenase (AHRD V3.3 *** A0A200Q0A3_9MAGN) Solyc01g012720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2VE75_CAPBA) Solyc01g012730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0R0_CAPCH) Solyc01g012740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g012750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldehyde dehydrogenase (AHRD V3.3 *-* A0A1Q3AVW5_CEPFO) Solyc01g012760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldehyde dehydrogenase (AHRD V3.3 *-* A0A200Q0A3_9MAGN) Solyc01g013760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g013780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g013790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0Q1_CAPCH) Solyc01g013810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0Q1_CAPCH) Solyc01g013820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 endoribonuclease Dicer homolog 2 (AHRD V3.3 --* XP_006428678.1) Solyc01g013840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g013850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0R0_CAPCH) Solyc01g013860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2VE65_CAPBA) Solyc01g013870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U7XMD6_NICSY) Solyc01g013880.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8DTH8_CAPAN) Solyc01g013883.1 1 13 0 18 7 4 6 15 4 0 3 6 0 2 2 Aldehyde dehydrogenase (AHRD V3.3 *-* A0A218WKY9_PUNGR) Solyc01g013887.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g013890.3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Aldehyde dehydrogenase (AHRD V3.3 *** A0A200Q0A3_9MAGN) Solyc01g013910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer 2b (AHRD V3.3 *-* A0A164W6J8_SOLLC) Solyc01g013920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g013930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G3B0Q1_CAPCH) Solyc01g013950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g013970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plastid transcriptionally active 3 (AHRD V3.3 *-* F4J3M2_ARATH) Solyc01g013975.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc01g013980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar protein-sorting-associated protein 33-like protein (AHRD V3.3 *-* A0A2G3CIT9_CAPCH) Solyc01g013985.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g013990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g013995.2 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing transcription factor VRN1-like isoform X1 (AHRD V3.3 --* A0A2I4FEY9_9ROSI) Solyc01g014000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plastid transcriptionally active 3 (AHRD V3.3 *-* F4J3M2_ARATH) Solyc01g014010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g014020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Hcr9-OR2C (AHRD V3.3 *-* Q4VSU3_SOLPI) Solyc01g014050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 asparagine-rich protein-like (AHRD V3.3 *-* XP_020397117.1) Solyc01g014055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc01g014060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plastocyanin-like (AHRD V3.3 *-* A0A200Q508_9MAGN) Solyc01g150116.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Early nodulin-like protein 1-like (AHRD V3.3 *-* A0A2K3NAJ4_TRIPR) Solyc01g014070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cupredoxin (AHRD V3.3 *-* A0A2U1PP75_ARTAN) Solyc01g014090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Synaptotagmin-4 (AHRD V3.3 *-* A0A2G2X4F1_CAPBA) Solyc01g014100.3 23 21 13 4 2 8 2 3 2 15 8 12 0 8 21 CLE protein 1 Solyc01g014105.1 106 126 116 131 123 159 128 138 105 70 78 104 76 96 41 IRK-interacting protein (AHRD V3.3 *** A0A2I4FH54_9ROSI) AT5G12900 Solyc01g014130.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8DTH8_CAPAN) Solyc01g014140.3 93 42 117 97 4 19 3 1 7 30 7 2 64 21 14 receptor-like protein 12 (AHRD V3.3 *-* A0A2G2YW48_CAPAN) Solyc01g014150.1 8 0 6 6 0 0 0 0 0 0 0 0 2 2 0 NL0E (AHRD V3.3 *-* Q9ZS81_SOLLC) Solyc01g014160.1 74 7 4 13 0 0 6 1 1 6 7 0 45 37 42 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8DTH8_CAPAN) Solyc01g014170.1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U7XMD6_NICSY) Solyc01g014180.3 9083 3880 4615 3666 2333 2765 2682 2029 3108 3458 5184 3522 3673 4215 7483 Zinc finger A20 and AN1 domain-containing stress-associated protein 8 (AHRD V3.3 *** A0A2G2UWG6_CAPBA) AT1G51200 Solyc01g014210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ADP,ATP carrier protein, mitochondrial (AHRD V3.3 *** A0A2G3CB84_CAPCH) Solyc01g014220.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 DUF616 domain-containing protein (AHRD V3.3 *-* A0A1Q3BIE2_CEPFO) Solyc01g014230.4 566 430 529 398 352 408 427 403 509 496 516 468 560 479 440 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CB55_CAPCH) AT2G23140 Solyc01g014240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TMV resistance protein N (AHRD V3.3 *-* A0A2G2VDZ1_CAPBA) Solyc01g014250.2 386 179 112 199 229 175 225 213 115 204 168 208 153 186 118 Unknown protein Solyc01g014260.1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g014270.3 330 126 174 199 128 164 165 109 124 208 298 136 104 158 283 Unknown protein Solyc01g014275.1 0 1 0 0 1 2 4 3 1 1 0 0 0 1 0 glycine-rich cell wall structural protein-like (AHRD V3.3 *-* XP_019067541.1) Solyc01g014300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A2G2YW48_CAPAN) Solyc01g014310.2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8DTH8_CAPAN) Solyc01g014315.1 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc01g014320.4 3 2 0 33 0 0 3 2 0 0 0 0 8 0 10 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1QHF5_ARTAN) Solyc01g014350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase family protein (AHRD V3.3 *-* F4ISN5_ARATH) Solyc01g014355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g014360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4-hydroxy-4-methyl-2-oxoglutarate aldolase (AHRD V3.3 --* A0A2G3CF74_CAPCH) Solyc01g014363.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc01g014367.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g014370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Synaptotagmin-4 (AHRD V3.3 *-* A0A2G2YVG9_CAPAN) Solyc01g014373.1 69 54 46 96 74 97 74 47 30 14 35 11 71 38 73 IRK-interacting protein (AHRD V3.3 *** A0A2I4FH54_9ROSI) Solyc01g014377.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g014390.3 11 1 14 3 4 6 3 11 2 2 11 16 3 14 6 Unknown protein Solyc01g014400.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g014410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dicer-like protein 2 (AHRD V3.3 *-* F8SXT7_NICAT) Solyc01g014420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g014430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g014440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g014450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dicer-like 2 protein (AHRD V3.3 *-* H9N4C7_NICAT) Solyc01g014470.1 0 9 2 18 34 19 22 13 8 9 4 17 9 14 12 Unknown protein Solyc01g014480.3 460 406 437 378 354 372 396 319 346 312 459 335 463 373 476 ETHYLENE INSENSITIVE 3-like 3 protein (AHRD V3.3 *** A0A2G3AJ97_CAPAN) AT1G73730 Solyc01g014490.4 965 936 898 889 1037 1057 1112 865 996 724 855 960 982 1040 1107 DNA topoisomerase 6 subunit B (AHRD V3.3 *** A0A2I4GDF3_9ROSI) AT3G20780 Solyc01g014510.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2K3NIX6_TRIPR) Solyc01g014520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *** A0A2U1PPA0_ARTAN) Solyc01g014530.2 112 52 46 70 21 46 54 17 97 100 63 109 66 102 169 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2K3PIJ6_TRIPR) Solyc01g014533.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0WSF9_9ASPA) Solyc01g150117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc01g014540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 --* A0A2K3NTH2_TRIPR) Solyc01g014550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *** A0A2U1PPA0_ARTAN) Solyc01g014560.4 102 52 125 85 44 28 43 48 34 70 54 47 49 45 47 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2K3PIJ6_TRIPR) Solyc01g014620.1 704 309 394 583 170 159 250 190 162 633 441 234 352 303 198 Unknown protein Solyc01g014640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2K3NIX6_TRIPR) Solyc01g014650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2U1PPA0_ARTAN) Solyc01g014660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2K3PIJ6_TRIPR) Solyc01g014680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2K3PIJ6_TRIPR) Solyc01g014690.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2U1PPA0_ARTAN) Solyc01g014700.2 13 4 0 1 0 3 0 0 2 7 0 0 2 9 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2K3PJV0_TRIPR) Solyc01g014710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF1677 family protein (DUF1677) (AHRD V3.3 *** AT1G72510.2) Solyc01g014720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Solanum lycopersicum Cytokinin Response Factor 7 AT1G22985 Solyc01g014725.2 1 0 0 0 0 0 0 3 0 3 0 0 0 0 0 Leucine-rich repeat protein kinase family protein, putative (AHRD V3.3 *-* A0A061F7S3_THECC) Solyc01g014730.2 1 2 0 4 0 5 0 0 0 3 3 0 0 3 0 Unknown protein Solyc01g014740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g014745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g014760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g014800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer-like protein 2 (AHRD V3.3 *-* A0A2G2Y661_CAPAN) Solyc01g014820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Inosine-uridine preferring nucleoside hydrolase family protein (AHRD V3.3 *-* A0A2U1LEG5_ARTAN) Solyc01g014830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Extensin-like protein Dif10 (AHRD V3.3 *** Q43504_SOLLC) Solyc01g014840.3 703 355 651 468 149 166 187 150 316 476 708 159 645 537 463 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2U1PW75_ARTAN) Solyc01g014850.4 1601 1383 1291 1062 1262 977 981 1095 837 851 816 905 1456 1263 1176 Zinc finger transcription factor 7 Solyc01g014860.3 235 217 141 141 177 150 129 195 129 162 83 136 186 189 79 Unknown protein Solyc01g014910.2 1 0 1 6 0 0 0 0 0 0 0 0 0 0 0 transcription factor bHLH95-like (AHRD V3.3 *** A0A2I4FIQ6_9ROSI) AT1G49770 Solyc01g014930.2 4 6 0 1 0 0 0 0 2 3 0 0 5 3 3 Hcr9-OR2C (AHRD V3.3 *-* Q4VSU3_SOLPI) Solyc01g014940.2 3 3 6 0 0 0 0 0 1 1 2 2 11 3 1 Hcr9-OR2A (AHRD V3.3 *-* Q4VSU5_SOLPI) Solyc01g014960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor bHLH95-like (AHRD V3.3 *** A0A2I4EEI6_9ROSI) AT1G49770 Solyc01g014963.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MX29_TRIPR) Solyc01g014967.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc01g014970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc-finger homeodomain protein 4 (AHRD V3.3 --* ZHD4_ARATH) Solyc01g014980.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g014990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g015000.3 1 0 1 0 0 1 0 1 3 0 0 0 1 0 1 Nitrogen regulatory protein P-II (AHRD V3.3 *-* A0A2G2Z6U6_CAPAN) Solyc01g015010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g015020.4 1447 1070 892 931 784 896 805 946 1243 988 896 1017 1197 1254 1442 PRLI-interacting factor (AHRD V3.3 *-* AT5G19900.5) AT5G19900 Solyc01g015030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g015035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g015050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 factor of DNA methylation 4-like (AHRD V3.3 --* XP_022844165.1) Solyc01g015060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XH/XS domain protein (AHRD V3.3 *-* A0A2K3NHW6_TRIPR) Solyc01g015080.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4AUE2_SOLLC) AT5G19890 Solyc01g150118.1 0 2 1 1 0 0 2 1 2 0 2 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) Solyc01g015130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* A0A2G2ZYX1_CAPAN) Solyc01g015133.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc01g015137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc01g015180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* A0A2G2X6L0_CAPBA) Solyc01g015185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc01g015200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plastid transcriptionally active 3 (AHRD V3.3 *-* F4J3M2_ARATH) Solyc01g015210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3D9A6_CEPFO) AT5G18000 Solyc01g015230.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g015250.1 0 0 0 1 0 3 0 0 0 1 0 0 0 0 0 Unknown protein Solyc01g015280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g015290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cold shock domain protein 1 (AHRD V3.3 --* AT4G36020.3) Solyc01g015293.1 12 11 7 15 9 13 13 7 0 18 0 0 17 0 1 Unknown protein Solyc01g015297.1 909 582 1003 814 353 385 374 356 366 665 1032 561 534 508 788 Unknown protein Solyc01g016300.1 0 3 1 2 0 0 5 1 5 5 5 6 8 0 26 Unknown protein Solyc01g016305.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NHV2_TRIPR) Solyc01g016350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8DTH8_CAPAN) Solyc01g016380.4 0 0 0 3 0 2 1 0 1 0 1 3 0 0 0 protein trichome birefringence-like (AHRD V3.3 *-* A0A2I4E1G4_9ROSI) Solyc01g016390.4 2 2 1 1 17 0 0 0 1 2 0 0 2 0 0 protein trichome birefringence-like (AHRD V3.3 *-* A0A2I4E1G4_9ROSI) Solyc01g016400.1 0 3 0 3 0 0 3 0 0 0 0 1 0 0 0 Unknown protein Solyc01g016410.4 498 353 392 496 359 409 434 380 312 545 516 430 490 412 511 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PQW6_ARTAN) AT2G44330 Solyc01g016412.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc01g016414.1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 TCP transcription factor 1 (AHRD V3.3 *** G3BGU2_SOLLC) Solyc01g016416.1 32 15 29 27 19 11 7 17 12 5 11 6 27 31 15 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1MQN8_ARTAN) Solyc01g016418.1 4 13 4 6 5 1 5 4 5 4 0 3 1 2 1 Unknown protein Solyc01g016430.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc01g016450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase AIP2 (AHRD V3.3 *-* XP_004228345.1) Solyc01g016460.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016470.3 335 844 753 514 542 558 569 585 432 316 344 422 1314 935 719 60S acidic ribosomal protein P1 (AHRD V3.3 *-* A0A2G2XN91_CAPBA),Pfam:PF00428 AT4G00810 Solyc01g016510.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant/protein (DUF789) (AHRD V3.3 *-* A0A1P8AV44_ARATH) Solyc01g016520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2Z5TZR0_9ASPA) Solyc01g016530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (DUF789) (AHRD V3.3 --* AT1G73210.3) Solyc01g016540.3 0 3 0 0 0 0 0 3 0 1 0 0 0 0 0 Plant/protein (DUF789) (AHRD V3.3 *** Q8LF98_ARATH) Solyc01g016545.1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc01g016550.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016560.1 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 Unknown protein Solyc01g016565.1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3CN06_NOCCA) Solyc01g016580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UPF0496 protein 1 (AHRD V3.3 *-* A0A1U8DXI0_CAPAN) Solyc01g016590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UPF0496 protein (AHRD V3.3 *-* A0A2K3LR63_TRIPR) Solyc01g016605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1NJZ4_ARTAN) Solyc01g150119.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016660.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* A0A1J6I800_NICAT) Solyc01g016665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc01g016670.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1L2L8_ARTAN) Solyc01g016685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc01g016690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016720.2 17 14 1 7 7 0 4 1 5 1 5 4 6 17 19 Unknown protein Solyc01g016725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) ATMG00240 Solyc01g016760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* XP_004234380.1) Solyc01g016770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB transcription factor (AHRD V3.3 *-* C0PK93_MAIZE) Solyc01g016780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor MYB86-like (AHRD V3.3 *-* XP_004232612.1) Solyc01g016790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150120.1 58 63 17 72 33 36 51 21 43 35 17 36 48 66 63 Transposon, En/Spm-like, Transposase-associated domain protein (AHRD V3.3 *-* A0A2U1N4P4_ARTAN) Solyc01g016830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016850.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plastid transcriptionally active 3 (AHRD V3.3 *-* F4J3M2_ARATH) Solyc01g016880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar protein-sorting-associated protein 33-like protein (AHRD V3.3 *-* A0A1J6K8K8_NICAT) Solyc01g016910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plastid transcriptionally active 3 (AHRD V3.3 *-* F4J3M2_ARATH) Solyc01g016930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plastid transcriptionally active 3 (AHRD V3.3 *-* F4J3M2_ARATH) Solyc01g016940.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g016960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-coding resistance gene analog (AHRD V3.3 *** B3V7S0_TOBAC) Solyc01g016970.2 2 0 15 0 1 0 1 4 2 4 0 3 0 0 1 Unknown protein Solyc01g016980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ARID/BRIGHT DNA-binding domain (AHRD V3.3 *-* A0A200PS47_9MAGN) Solyc01g017020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ARID/BRIGHT DNA-binding domain (AHRD V3.3 *-* A0A200PS47_9MAGN) Solyc01g017040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carotenoid cleavage dioxygenase 1 (AHRD V3.3 *-* A0A2U1PPW3_ARTAN) Solyc01g017060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A167NIB9_9SOLA) Solyc01g017070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1L2JIZ1_MURKO) Solyc01g017080.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2XPU4_CAPBA) Solyc01g017085.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S18, chloroplastic (AHRD V3.3 *** A0A1U8QD82_CAPAN) Solyc01g017090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* I6N9A4_DATST) Solyc01g017100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* Q9MUA4_9SOLN) Solyc01g017110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A251UU76_HELAN) Solyc01g017120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G3BUH1_CAPCH) Solyc01g017130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A167NIB9_9SOLA) Solyc01g017140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0F7BHY0_9SOLA) Solyc01g017145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* G0YEE9_CLAVI) Solyc01g017150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 protein (AHRD V3.3 *** J7H9P3_CAPAN) Solyc01g017160.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* W8CPX8_PANGI) Solyc01g017170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A2P1N7K1_9LAMI) Solyc01g017180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A0U5ELY8_IONAC) Solyc01g017200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (AHRD V3.3 *-* ACCD_SOLLC) Solyc01g017210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic (AHRD V3.3 *** A0A1L5JAF5_CHLPO) Solyc01g017220.2 0 0 0 0 0 0 0 1 3 1 1 2 0 1 1 ATP synthase epsilon chain, chloroplastic (AHRD V3.3 *** A0A1U8QCD5_CAPAN) Solyc01g017230.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* J7H711_CAPAN) Solyc01g017240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc01g017250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc01g017260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A125RTJ3_9ASTR) Solyc01g017280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2K9RIX1_GALTE) Solyc01g017290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc01g017300.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* W6CLH8_9LILI) Solyc01g017320.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* A0A1S6KJ48_POLSI) Solyc01g017330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* A0A059P402_9GENT) Solyc01g017360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A1U8QD58_CAPAN) Solyc01g017370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* F6I9L3_9LAMI) Solyc01g017380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* G1FB34_SPIPO) Solyc01g017390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA polymerase C (AHRD V3.3 *-* A0A023U9U5_9LILI) Solyc01g017410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A059Q6L0_HYONI) Solyc01g017420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2G2ZTM2_CAPAN) Solyc01g017430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b6-f complex subunit 4 (AHRD V3.3 *** A0A2G2XBM1_CAPBA) Solyc01g017440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *** A0A1U8QD90_CAPAN) Solyc01g017450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S11, chloroplastic (AHRD V3.3 *** A0A2S1H791_9ROSA) Solyc01g017460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* A0A2D3C2T2_9LAMI) Solyc01g017470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* A0A1U8QCC2_CAPAN) Solyc01g017480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc01g017510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2P1M6S4_9LAMI) Solyc01g017520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit a, chloroplastic (AHRD V3.3 *** A0A2G2ZQB4_CAPAN) Solyc01g017530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2 (AHRD V3.3 *** H2BC65_MOLVE) Solyc01g017535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** K4AUT5_SOLLC) Solyc01g017560.3 13 10 54 19 7 5 10 3 6 7 12 2 7 28 19 Unknown protein Solyc01g017565.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc01g017600.3 288 146 370 480 6 17 4 3 150 191 254 69 87 110 48 transmembrane protein 45B-like (AHRD V3.3 *** A0A2I4DQK0_9ROSI) AT1G55230 Solyc01g017610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tryptophan aminotransferase-related protein 2 (AHRD V3.3 *** A0A2G3ANV2_CAPAN) AT1G70560 Solyc01g017620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tryptophan aminotransferase-related protein 1 (AHRD V3.3 *-* A0A2G2VMW5_CAPBA) Solyc01g017640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017670.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MW90_TRIPR) Solyc01g017690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-coding resistance gene analog (AHRD V3.3 *-* B3V7R7_TOBAC) Solyc01g017700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-LRR protein (AHRD V3.3 --* Q9SM52_SOLAC) Solyc01g017720.2 23 26 26 10 15 24 26 24 5 50 11 11 24 16 10 Unknown protein Solyc01g017725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b6 (AHRD V3.3 *-* A0A1U8QCH4_CAPAN) Solyc01g017750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ARID/BRIGHT DNA-binding domain-containing protein (AHRD V3.3 *-* F4I2F0_ARATH) Solyc01g150122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017795.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* A0A2G2ZYX1_CAPAN) Solyc01g017820.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* A0A1U8G7I8_CAPAN) Solyc01g017825.1 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 Replication protein A 70 kDa DNA-binding subunit B (AHRD V3.3 --* RFA1B_ORYSJ) Solyc01g017860.3 188 125 107 108 84 128 93 80 79 113 164 98 124 119 78 Unknown protein Solyc01g017870.2 0 0 0 0 5 1 0 0 0 0 3 0 0 0 1 Unknown protein Solyc01g017873.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017877.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3NTW1_TRIPR) ATMG00860 Solyc01g017950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g017970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g018010.2 212 141 91 86 107 81 71 74 73 104 170 78 115 101 169 Unknown protein Solyc01g018015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 acidic leucine-rich nuclear phosphoprotein 32 family member E-like (AHRD V3.3 --* XP_010327604.1) Solyc01g018020.3 8 7 0 0 0 0 0 0 1 3 0 0 0 6 6 Transketolase (AHRD V3.3 *** A0A200R5S8_9MAGN) Solyc01g018040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc01g018045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) Solyc01g018070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ARID/BRIGHT DNA-binding domain (AHRD V3.3 *-* A0A200PS47_9MAGN) Solyc01g018100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g019100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020100.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *-* A0A2G2X5V3_CAPBA) Solyc01g020113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DREB2A-interacting protein 1 (AHRD V3.3 --* AT1G06770.1) Solyc01g020117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-alkenal reductase (NADP(+)-dependent)-like (AHRD V3.3 *-* A0A2I4GX13_9ROSI) Solyc01g020120.3 0 2 2 1 0 0 4 0 6 5 6 2 3 1 0 DNA helicase (AHRD V3.3 *-* A0A2G3A9H6_CAPAN) Solyc01g020130.3 25 117 28 55 8 17 38 15 72 17 17 61 13 34 21 Glycosyltransferases (AHRD V3.3 *-* K4D5Z0_SOLLC) Solyc01g020150.3 3 25 9 8 4 3 10 3 10 5 0 13 7 12 2 Glycosyltransferases (AHRD V3.3 *-* K4D5Z0_SOLLC) Solyc01g020160.1 5 13 4 5 1 0 0 0 6 2 3 4 1 1 0 transcription factor bHLH95-like (AHRD V3.3 *-* XP_019067769.1) Solyc01g020170.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 074 AT1G49770 Solyc01g020180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor bHLH95-like (AHRD V3.3 *-* A0A2I4FIQ6_9ROSI) Solyc01g020190.2 4 3 1 0 1 0 0 0 0 1 1 1 1 0 6 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* F4JV39_ARATH) Solyc01g020220.3 128 87 118 98 72 91 123 84 90 87 129 101 88 100 149 Replication factor C subunit 3 (AHRD V3.3 *** A0A1U8E9Y1_CAPAN),Pfam:PF13177 Solyc01g020240.4 366 418 474 461 650 602 565 585 460 349 402 556 443 460 452 hypothetical protein (AHRD V3.3 *** AT1G09290.1) AT1G09290 Solyc01g020245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020280.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150124.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L7a (AHRD V3.3 *-* A0A2G2XPX1_CAPBA) Solyc01g020300.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020320.3 194 203 325 247 251 301 289 201 218 167 270 210 265 224 242 hypothetical protein (AHRD V3.3 *** AT2G20480.1) AT2G20480 Solyc01g020323.1 0 0 3 0 10 5 2 10 1 0 0 1 0 0 0 Glucan endo-1,3-beta-glucosidase 6 (AHRD V3.3 *-* A0A2G2XC72_CAPBA) Solyc01g020327.1 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 Pectate lyase (AHRD V3.3 *-* A0A2G3B368_CAPCH) Solyc01g020340.2 14 32 17 17 18 14 18 22 24 18 7 22 19 15 13 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2U1MY66_ARTAN) Solyc01g020343.1 5 7 9 9 2 4 4 8 8 2 3 18 15 6 2 Unknown protein Solyc01g020347.1 9 14 6 5 0 14 9 5 10 4 2 5 11 12 7 Unknown protein Solyc01g020350.1 2 0 4 1 0 0 0 0 0 4 0 0 0 0 0 pentatricopeptide repeat-containing protein At5g66520-like (AHRD V3.3 *-* A0A2I4FSH7_9ROSI) Solyc01g020353.1 26 33 35 40 28 30 49 25 27 7 22 24 32 70 75 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc01g020357.1 57 36 19 67 22 38 31 29 29 40 14 59 39 49 43 Unknown protein Solyc01g020360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020372.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *-* A0A0B4ULM0_ORYSJ) Solyc01g150125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150126.1 6 5 4 20 1 3 0 0 6 5 7 5 3 19 41 Calcium-binding EF-hand (AHRD V3.3 *-* A0A2U1P7H3_ARTAN) Solyc01g150127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020440.3 703 1361 1047 918 1368 1278 1373 1606 875 728 724 1170 1209 1212 671 Replication factor C subunit 3 (AHRD V3.3 *** A0A1U8E9Y1_CAPAN) AT5G27740 Solyc01g150128.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin-like-specific protease ESD4 (AHRD V3.3 --* XP_021814887.1) Solyc01g020450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 orf82 (chloroplast) (AHRD V3.3 *-* YP_008994037.1) Solyc01g020470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 9 (AHRD V3.3 *** A0A290WKX8_SOLLC) Solyc01g020480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF659 domain-containing protein (AHRD V3.3 *-* A0A1Q3DB12_CEPFO) Solyc01g020490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HAT transposon superfamily (AHRD V3.3 --* A0A2U1MJ98_ARTAN) Solyc01g020495.1 115 109 86 128 86 62 93 87 67 102 53 86 65 112 48 Unknown protein Solyc01g020500.2 40 33 32 35 25 20 37 11 29 43 34 34 27 40 23 Unknown protein Solyc01g020510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2Z199_CAPAN) Solyc01g020520.4 127 111 88 133 149 144 144 121 100 102 67 129 117 104 65 Membrane-bound transcription factor site-2 protease (AHRD V3.3 *** A0A200QAL7_9MAGN) AT4G20310 Solyc01g020521.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020522.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g020524.1 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic (AHRD V3.3 *-* A0A2G2W0B0_CAPBA) Solyc01g020526.1 0 0 0 0 0 2 0 0 0 0 0 0 1 0 3 Pectate lyase (AHRD V3.3 *-* A0A2G3B368_CAPCH) Solyc01g020528.1 51 36 57 23 24 35 50 63 48 22 60 28 44 55 58 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic (AHRD V3.3 *-* A0A2G3CTC6_CAPCH) Solyc01g020570.3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G2VW56_CAPBA) Solyc01g020575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g021600.4 16 3 20 11 3 1 10 0 91 21 17 43 19 10 29 Dirigent protein (AHRD V3.3 *** K4AV41_SOLLC) AT1G58170 Solyc01g021610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g021620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** H8ZXA8_SOLTU) Solyc01g021640.3 451 373 395 383 317 394 339 326 342 345 305 333 562 522 422 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G17370.1) AT5G17370 Solyc01g021680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF4371 domain-containing protein (AHRD V3.3 *-* A0A1Q3C0Y0_CEPFO) Solyc01g021685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *-* A0A2G2X5V3_CAPBA) Solyc01g021690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin protein ligase DRIP1-like (AHRD V3.3 *-* XP_025888788.1) Solyc01g021695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g021700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2G2WUM4_CAPBA) Solyc01g021720.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc01g021730.2 18 14 1 9 0 0 0 4 1 2 3 21 9 8 14 NAC domain-containing protein (AHRD V3.3 *-* A0A2U1NIJ0_ARTAN) Solyc01g021740.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Mitochondrial carrier domain-containing protein (AHRD V3.3 *-* A0A2U1LMU6_ARTAN) Solyc01g021745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g022740.3 407 247 276 281 334 361 338 276 243 266 269 291 255 299 296 F-box/kelch-repeat protein (AHRD V3.3 *** A0A2G3DG30_CAPCH) AT1G55270 Solyc01g022745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc01g022750.3 654 1637 1392 1560 1942 1720 1844 1880 1533 1378 1462 1344 1848 1792 1358 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (AHRD V3.3 *** A0A1U8GJI0_CAPAN) AT3G12260 Solyc01g022760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g022780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 fibril-forming collagen alpha chain-like (AHRD V3.3 *-* XP_022866881.1) Solyc01g022785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc01g033990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 inositol-1%2C4%2C5-trisphosphate 5-phosphatase (AHRD V3.3 *-* AT5G54870.1) Solyc01g033995.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Flavin-containing monooxygenase (AHRD V3.3 *-* A0A2G2V7T6_CAPBA) Solyc01g034010.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc01g034020.3 789 1573 1425 1621 1910 1995 2194 1813 1340 1204 1152 1335 1541 1502 1321 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A2G3DEI1_CAPCH) Solyc01g034040.1 78 42 35 57 18 38 24 18 27 37 27 37 41 35 30 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1KQG6_ARTAN) AT1G40087 Solyc01g034050.1 0 0 0 0 6 0 0 4 0 0 0 0 0 2 1 Histone-lysine N-methyltransferase ASHR1 (AHRD V3.3 *-* A0A2G2WJX2_CAPBA) Solyc01g034070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 replication factor-A carboxy-terminal domain protein (AHRD V3.3 *** AT2G28105.2) AT2G28105 Solyc01g034075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc01g034080.1 7 3 9 9 19 9 9 8 5 10 7 15 11 7 2 Amino acid/polyamine transporter I (AHRD V3.3 *** A0A200RCI7_9MAGN) AT3G13620 Solyc01g034140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g034145.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc01g034150.4 1098 717 828 586 469 515 537 354 446 494 518 441 722 704 698 DNA polymerase eta (AHRD V3.3 *** A0A2G3AIQ2_CAPAN) AT5G44740 Solyc01g150129.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein At1g49475-like (AHRD V3.3 --* XP_025886111.1) Solyc01g034190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 DNA binding domain (AHRD V3.3 *-* A0A200PVN0_9MAGN) Solyc01g034210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MPB2_TRIPR),Pfam:PF14223 Solyc01g034213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g034217.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g038230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g038231.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g038232.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g038233.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g038234.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g038236.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g038238.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g028980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g028985.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc01g028960.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc01g028965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DEAD-box ATP-dependent RNA helicase (AHRD V3.3 *-* A0A1Y1II36_KLENI) Solyc01g028930.4 699 624 648 624 631 616 599 690 558 729 487 577 691 571 520 TATA-box-binding protein (AHRD V3.3 *** A0A1U8HIY4_CAPAN) AT1G55520 Solyc01g028910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *-* B6ZA83_HELAN) Solyc01g028900.3 2869 2152 2039 2081 1875 1492 1488 1680 2355 2790 2326 2065 2242 2209 2016 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (AHRD V3.3 *** A0A2G3DFR9_CAPCH) AT3G13450 Solyc01g028870.3 732 831 734 725 705 786 768 730 664 740 689 665 705 767 795 Antitermination NusB domain-containing protein (AHRD V3.3 *** Q93XY7_ARATH) AT4G26370 Solyc01g028875.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc01g028860.3 16190 12393 7014 7882 7876 8293 7684 8588 8713 8697 6767 8501 9414 9929 8929 Evolutionarily conserved C-terminal region 2 (AHRD V3.3 *** F4JDC2_ARATH) AT3G13460 Solyc01g028865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g028830.3 1713 1251 1900 1642 1100 1083 1198 1104 1566 1187 1689 1157 2139 1910 2161 Protein kinase domain (AHRD V3.3 *** A0A200R109_9MAGN) AT5G56460 Solyc01g028810.3 10572 10982 7723 6712 7506 6406 6988 8248 8631 7154 6383 8868 10613 9673 8215 Beta chaperonin 60 (AHRD V3.3 *** Q0W9E2_SOLCO) AT3G13470 Solyc01g028800.3 4 23 23 51 81 34 32 27 41 41 30 28 55 57 28 Pumilio-like protein 11 (AHRD V3.3 *** A0A2G2XPL6_CAPBA) AT5G56510 Solyc01g028803.1 171 50 35 61 35 30 28 34 29 37 65 16 94 120 111 Cytochrome P450 (AHRD V3.3 *** A0A200R9G0_9MAGN) Solyc01g028807.1 665 339 553 1011 50 50 31 38 368 275 718 155 837 594 2583 Unknown protein Solyc01g044270.3 661 577 644 447 487 570 551 569 520 523 495 460 563 623 524 DnaJ domain (AHRD V3.3 *** A0A200QGM0_9MAGN) AT2G25560 Solyc01g044275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g044300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g044340.3 53 39 23 27 15 16 16 20 42 69 19 27 36 53 9 RBR-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3AIF0_CAPAN) Solyc01g044350.3 1449 791 744 687 490 495 525 466 748 780 681 568 1152 880 766 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2XPJ0_CAPBA) Solyc01g044360.4 3421 5231 3036 3131 3423 3281 3609 4117 3553 3197 2601 3090 3842 4145 3341 importin-5-like (AHRD V3.3 *** A0A2I4FSB4_9ROSI) AT5G19820 Solyc01g044365.1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Alg9-like mannosyltransferase family (AHRD V3.3 --* AT5G14850.2) Solyc01g044370.3 34 26 53 52 8 27 25 24 30 39 48 38 51 60 67 Molybdenum cofactor sulfurase family protein (AHRD V3.3 *** A0A2U1MM41_ARTAN) Solyc01g044375.1 2 1 1 0 2 3 5 4 5 7 3 3 4 0 7 Molybdenum cofactor sulfurase (AHRD V3.3 *-* A0A200QQK0_9MAGN) Solyc01g044420.4 0 0 20 0 3 2 5 3 3 0 2 0 7 9 1 Calmodulin binding protein (AHRD V3.3 *** A0A2K3N563_TRIPR) AT3G13600 Solyc01g044490.4 410 637 816 797 807 757 781 634 582 471 557 512 927 822 661 Elongation factor P (AHRD V3.3 *** B6TVD2_MAIZE) AT4G26310 Solyc01g044500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g044520.2 0 0 1 0 0 0 0 0 0 0 4 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1QNF0_ARTAN) Solyc01g044523.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g044527.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LF16_TRIPR) Solyc01g044550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1N5S2_ARTAN) Solyc01g044551.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200Q4B5_9MAGN) Solyc01g044552.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g044554.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1P7E5_ARTAN) Solyc01g044556.1 138 52 83 93 59 59 47 23 44 60 94 50 74 79 176 TPX2 (targeting protein for Xklp2) protein family (AHRD V3.3 --* AT4G32330.4) Solyc01g044558.1 134 100 64 80 74 57 44 39 79 53 79 71 66 109 95 Cyclin-A1-1 (AHRD V3.3 *-* A0A1U8GEH4_CAPAN) Solyc01g047580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Signal recognition particle subunit SRP72 (AHRD V3.3 *-* A0A2G2YL73_CAPAN) Solyc01g049650.3 2532 1660 1797 2198 1401 1356 1384 1365 2137 1972 1874 1480 1847 1737 2261 Pyruvate kinase (AHRD V3.3 *** A0A2G2XPN6_CAPBA) AT5G56350 Solyc01g049660.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S2-locus F-box protein (AHRD V3.3 *** Q6JE34_PETIN) Solyc01g049680.3 2574 1699 1994 1662 1745 1748 1915 1466 1850 2037 2294 1674 1802 1794 2151 Transcription factor Pur-alpha 1 (AHRD V3.3 *** A0A2G2W459_CAPBA) AT2G32080 Solyc01g049690.4 432 295 227 189 261 253 225 254 294 397 203 333 290 297 162 transcription factor Pur-alpha 1 (AHRD V3.3 *-* A0A2I4G155_9ROSI) Solyc01g049720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g049740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4 (AHRD V3.3 *-* A0A1J3JCP1_NOCCA) Solyc01g049750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g049760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4GXB6_9ROSI) Solyc01g049770.3 383 194 270 213 131 218 178 133 150 192 286 147 292 188 308 Unknown protein Solyc01g049790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* I1WYF2_PAELC) Solyc01g049810.4 41 65 52 87 58 54 70 45 63 30 49 108 68 77 64 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RCJ8_9MAGN) AT5G56310 Solyc01g049820.2 5 6 0 0 5 23 23 6 6 0 16 8 0 2 4 kinesin-like protein KIF3A isoform X3 (AHRD V3.3 *** A0A2I4G0Z7_9ROSI) Solyc01g049830.2 2 1 3 0 0 8 6 3 2 1 0 2 0 0 0 Kinesin (AHRD V3.3 *-* A0A200Q0B0_9MAGN) Solyc01g049840.1 0 1 0 0 0 0 3 1 1 0 3 0 0 0 0 Kinesin (AHRD V3.3 *-* A0A200Q0B0_9MAGN) Solyc01g150130.1 0 0 0 0 0 2 0 1 1 0 0 1 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3CWT8_CAPCH) Solyc01g049880.3 227 65 345 412 21 33 36 22 277 103 281 135 29 236 312 Unknown protein Solyc01g049890.3 2219 2286 2345 2229 1963 1863 1927 2228 2615 2376 2000 2185 2440 2565 3035 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (AHRD V3.3 *** Q93WB8_ARATH) AT3G13410 Solyc01g049910.4 182 118 140 104 68 109 99 93 87 111 100 81 113 92 139 Membrane-bound transcription factor site-2 protease (AHRD V3.3 *** A0A200QAL7_9MAGN) AT4G20310 Solyc01g049920.2 17 22 10 11 9 7 4 6 12 15 2 3 11 10 9 Unknown protein Solyc01g150131.1 219 141 142 113 81 61 39 69 101 131 86 62 42 70 115 Unknown protein Solyc01g049950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L5 (AHRD V3.3 *-* A0A290WL59_SOLLC) Solyc01g049960.4 664 851 1174 951 1058 1071 1090 1199 863 677 919 1048 845 1038 910 chromosome-associated kinesin (AHRD V3.3 *** AT4G26410.1) AT4G26410 Solyc01g050010.3 175 114 329 188 115 147 156 105 123 127 214 132 269 169 293 Zinc finger BED domain-containing protein DAYSLEEPER (AHRD V3.3 *** A0A1J3I687_NOCCA) Solyc01g050040.4 237 164 207 180 181 261 237 141 192 141 270 148 123 172 220 RING/U-box superfamily protein (AHRD V3.3 *-* Q9FM98_ARATH) AT5G56340 Solyc01g050045.1 10 4 4 1 4 6 3 4 1 8 4 1 2 0 1 Unknown protein Solyc01g050070.4 186 220 195 250 211 241 234 199 161 161 109 217 207 234 228 Transmembrane protein (AHRD V3.3 *** A0A1P8AMQ6_ARATH) AT1G55535 Solyc01g050050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g055160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S3-locus SLFlike1 protein (AHRD V3.3 *** A0A076YJN5_PETIN) Solyc01g055165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc01g055200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S10-ribonuclease (AHRD V3.3 *** Q00591_PETHY) Solyc01g056200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cyclin-dependent kinase F-4 isoform X1 (AHRD V3.3 --* XP_019070805.1) Solyc01g056220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S2-locus F-box type-11 protein (AHRD V3.3 *** A0A076YEX4_PETIN) AT5G41720 Solyc01g056240.1 0 0 0 0 1 0 0 1 0 1 0 0 3 0 0 S-locus F-box-like protein a (AHRD V3.3 *-* B0F0G2_PETIN) Solyc01g056250.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S2-locus F-box protein (AHRD V3.3 *-* Q6JE34_PETIN) AT5G41720 Solyc01g056260.1 2 2 1 1 0 4 4 2 0 0 9 0 0 3 9 Unknown protein Solyc01g056280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S2-locus F-box protein (AHRD V3.3 *** Q6JE34_PETIN) Solyc01g056285.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S3-locus F-box type-4 protein (AHRD V3.3 *** A0A076YGV2_PETIN) Solyc01g056290.2 0 3 0 8 6 1 1 8 1 0 0 5 0 0 5 mediator of RNA polymerase II transcription subunit 3-like (AHRD V3.3 --* XP_010321536.1) Solyc01g056310.3 0 57 184 3 0 0 22 17 1 2 0 0 4 4 0 anther-specific LAT51 Solyc01g056320.1 83 29 38 44 16 25 26 10 20 47 51 45 22 48 31 Unknown protein Solyc01g056330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G2V8P8_CAPBA) Solyc01g056340.4 1348 998 1103 1271 898 881 815 818 825 1062 989 967 1076 1072 986 de-etiolated 1 AT4G10180 Solyc01g056360.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g056370.3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g056380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nodulin/glutamine synthase-like protein (AHRD V3.3 *-* F4J9A0_ARATH) Solyc01g056390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 nodulin/glutamine synthase-like protein (AHRD V3.3 *-* AT3G53180.1) Solyc01g056400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamine synthetase (AHRD V3.3 *-* I6WUR4_CAMSI) Solyc01g056410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nodulin/glutamine synthase-like protein (AHRD V3.3 *-* F4J9A0_ARATH) Solyc01g056420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H domain (AHRD V3.3 *** A0A200RDX4_9MAGN) Solyc01g056430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamine synthetase (AHRD V3.3 *-* I6WUR4_CAMSI) Solyc01g056440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nodulin/glutamine synthase-like protein (AHRD V3.3 *-* F4J9A0_ARATH) Solyc01g056450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamine synthetase (AHRD V3.3 *-* I6WUR4_CAMSI) Solyc01g056460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1B0VVX8_9LAMI) Solyc01g056470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2S0SUS0_9FABA) Solyc01g056480.3 82 101 98 88 54 69 80 90 79 87 73 87 59 57 79 Unknown protein Solyc01g150132.1 20 14 0 8 13 8 4 3 15 5 5 3 23 34 73 Unknown protein Solyc01g056520.3 945 894 985 1140 741 817 893 756 780 727 797 770 1090 1172 991 ARM repeat superfamily protein (AHRD V3.3 *** AT5G06120.9) AT5G06120 Solyc01g056530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oligopeptide transporter (AHRD V3.3 *-* A0A200RAW0_9MAGN) Solyc01g056570.3 1312 1199 1176 1425 1295 1375 1498 1405 1407 1337 1443 1428 1155 1511 1425 Regulator of chromosome condensation (AHRD V3.3 *** A0A200PRS6_9MAGN) AT3G03790 Solyc01g056575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc01g056580.4 2 0 0 0 0 1 4 0 0 5 0 0 0 0 0 L-aspartate oxidase (AHRD V3.3 *-* A0A2G3CUJ1_CAPCH) Solyc01g056590.2 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 transcription initiation factor TFIID subunit (AHRD V3.3 *-* AT5G65540.1) Solyc01g056600.2 228 276 188 100 264 243 210 350 298 249 196 327 253 217 132 Double-stranded RNA-binding protein 1 (AHRD V3.3 *-* A0A2G2XPY3_CAPBA) Solyc01g056610.1 1 6 14 0 5 1 0 5 3 1 1 7 5 9 0 Unknown protein Solyc01g056620.4 469 437 469 435 385 390 444 346 398 416 336 467 484 444 373 Double-stranded RNA-binding protein 1 (AHRD V3.3 *** A0A2G2XPY3_CAPBA) AT1G09700 Solyc01g056640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g056650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* A0A2G2XJF0_CAPBA) Solyc01g056653.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g056657.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g056660.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S3 putative F-box protein SLF-S3B (AHRD V3.3 *** Q64HD2_PETHY) AT5G41720 Solyc01g056665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g056690.4 632 788 535 498 633 849 928 984 722 727 554 676 663 616 377 Protein kinase and PP2C-like domain-containing protein (AHRD V3.3 *** A0A2G3AJ12_CAPAN) AT2G40860 Solyc01g056695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3MZI3_TRIPR) Solyc01g056720.4 924 661 778 624 727 731 633 619 632 823 911 602 986 759 591 small basic intrinsic protein 2.1 AT3G56950 Solyc01g056730.3 44 25 21 18 34 14 16 24 24 36 28 13 19 38 23 Unknown protein Solyc01g056750.1 59 39 34 16 30 31 25 32 25 20 24 12 41 29 18 Zinc finger, CCHC-type (AHRD V3.3 *-* A0A2U1PD96_ARTAN) Solyc01g056760.3 175 63 112 84 56 72 97 57 84 84 110 85 93 109 103 Zinc finger, CCHC-type (AHRD V3.3 *-* A0A2U1MSA1_ARTAN) Solyc01g056770.1 71 55 39 72 42 55 72 33 48 39 73 47 54 44 87 Unknown protein Solyc01g056780.3 215 712 731 534 749 673 721 761 561 448 549 743 477 728 562 50S ribosomal protein L34 (AHRD V3.3 *** A0A1U8FLP5_CAPAN) AT1G29070 Solyc01g056790.3 48 37 65 62 54 79 46 59 45 61 70 62 33 26 80 Exostosin-like protein (AHRD V3.3 *-* A0A2U1QBT5_ARTAN) Solyc01g056800.1 43 24 42 48 28 72 65 24 35 26 49 26 17 27 34 Exostosin-like protein (AHRD V3.3 *-* Q2HVN7_MEDTR) Solyc01g056810.4 274 230 211 252 293 337 375 285 251 183 259 301 225 265 272 Syntaxin (AHRD V3.3 *** A0F0A7_NICBE) Solyc01g056830.3 36 39 21 31 26 34 34 63 52 34 44 46 26 32 34 Syntaxin (AHRD V3.3 *-* A0F0A7_NICBE) Solyc01g056840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2L1ZQP9_9LAMI) Solyc01g056850.3 1248 2206 3128 2750 6601 8053 6389 7256 2360 2282 3162 4916 1537 4344 4648 CTP synthase (AHRD V3.3 *** A0A2G2XFG8_CAPBA) AT1G30820 Solyc01g056880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heme-binding-like protein, chloroplastic (AHRD V3.3 *-* A0A2G2VV44_CAPBA) Solyc01g150134.1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 Unknown protein Solyc01g056890.1 0 0 0 0 2 0 0 0 0 2 0 0 0 2 0 protein CURVATURE THYLAKOID 1A, chloroplastic-like (AHRD V3.3 *-* XP_004248070.1) Solyc01g056900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein CURVATURE THYLAKOID 1A, chloroplastic (AHRD V3.3 --* A0A2G3BDI0_CAPCH) Solyc01g056910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protease Do-like 7 (AHRD V3.3 *-* A0A2G3AAM6_CAPAN) Solyc01g056940.4 12 54 139 50 78 47 28 34 33 15 33 27 59 53 66 Ubiquitin (AHRD V3.3 *** B1P770_LOLTE) AT2G47110 Solyc01g056950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4-hydroxy-4-methyl-2-oxoglutarate aldolase (AHRD V3.3 *-* A0A2G3CF74_CAPCH) Solyc01g056960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter C family member 8 (AHRD V3.3 *-* A0A2G3CNG8_CAPCH) Solyc01g056970.1 0 0 4 0 0 0 0 0 0 0 0 0 0 2 0 protein PELPK2-like (AHRD V3.3 *** XP_004229132.1) Solyc01g056990.3 130 141 180 198 283 266 260 249 168 103 105 220 104 170 111 hypothetical protein (AHRD V3.3 *** AT5G06590.1) AT5G06590 Solyc01g057000.3 214 18 8 2 29 21 16 8 31 42 18 13 1 16 70 Universal stress protein AT3G58450 Solyc01g057003.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 binding protein (AHRD V3.3 *-* AT2G25570.3) Solyc01g057007.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-directed DNA polymerase (AHRD V3.3 *-* A0A2I0W3D4_9ASPA) Solyc01g057010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S3-locus F-box type-14 protein (AHRD V3.3 *** A0A076YJL9_PETIN) Solyc01g057020.3 338 288 198 275 297 265 259 319 310 313 300 302 226 351 251 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic-like (AHRD V3.3 *-* A0A2I4DQN1_9ROSI) Solyc01g057060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methyltransferase (AHRD V3.3 *-* A0A2U1QFS7_ARTAN),Pfam:PF03602 Solyc01g057080.1 0 1 0 2 0 0 0 0 0 12 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2X462_CAPBA) AT1G71520 Solyc01g057090.4 1061 523 642 564 420 477 493 499 435 663 486 612 401 453 551 DUF2215 domain-containing protein (AHRD V3.3 *** A0A1Q3D866_CEPFO) AT1G28760 Solyc01g057110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0XIZ1_9ASPA) Solyc01g057117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057120.2 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 Unknown protein Solyc01g057130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc01g057137.1 0 0 0 0 3 0 2 2 1 0 0 0 0 0 0 Carboxypeptidase (AHRD V3.3 *-* A0A1U8HG02_CAPAN) Solyc01g057140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057150.1 2 4 18 11 2 2 1 4 1 6 0 3 4 1 0 Unknown protein Solyc01g057160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057165.1 498 103 221 149 78 144 107 101 125 192 211 156 77 203 813 Unknown protein Solyc01g057180.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic translation initiation factor 3 subunit A (AHRD V3.3 *-* A0A2G3AVW5_CAPCH) Solyc01g057190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-locus F-box-like protein d (AHRD V3.3 *** B0F0G0_PETIN) Solyc01g057200.4 271 252 418 277 387 388 346 361 324 248 374 347 290 298 318 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1QJ39_ARTAN) AT3G06430 Solyc01g057210.3 1398 1278 828 1110 1767 1885 1737 1624 1118 1678 992 1329 1381 1004 847 Mitochondrial pyruvate dehydrogenase kinase (AHRD V3.3 *** E5GC37_CUCME) AT3G06483 Solyc01g057220.3 0 0 10 0 9 3 4 13 1 2 0 3 4 0 0 Pectinesterase (AHRD V3.3 *** A0A1Q3CE67_CEPFO) AT4G33230 Solyc01g057250.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L3 (AHRD V3.3 *-* A0A2G3A2L4_CAPAN) Solyc01g057255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DEAD-box ATP-dependent RNA helicase 8-like (AHRD V3.3 --* XP_021838650.1) Solyc01g057260.4 9 5 17 21 2 6 9 6 5 1 8 0 10 14 10 Transmembrane protein, putative (DUF247) (AHRD V3.3 *** F4IZB4_ARATH) Solyc01g057270.4 174 135 110 73 74 51 37 57 86 70 53 79 106 123 112 Calmodulin-binding transcription factor SR4 (AHRD V3.3 *** H8ZRY5_SOLLC) Solyc01g057300.2 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 bHLH transcription factor 002 AT1G49770 Solyc01g057310.4 204 558 515 738 1014 1203 1093 1213 802 402 609 798 310 475 389 Phragmoplast orienting kinesin 2 (AHRD V3.3 *** A0A2G2XPE0_CAPBA) Solyc01g057320.3 18 133 66 192 297 189 296 408 175 199 41 136 26 109 26 Kinesin (AHRD V3.3 *-* A0A200QSU4_9MAGN) Solyc01g057330.1 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 Metal-nicotianamine transporter YSL1 (AHRD V3.3 *-* A0A2G3CXV2_CAPCH) AT5G45450 Solyc01g057340.3 117 108 92 90 83 92 111 96 105 100 109 96 116 95 51 Unknown protein Solyc01g057350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g150135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc01g057390.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G3C774_CAPCH) Solyc01g057395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Unknown protein Solyc01g057420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057430.3 19 20 9 23 2 2 13 2 7 13 16 15 4 20 8 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic (AHRD V3.3 *-* A0A2G2W5S4_CAPBA) Solyc01g057435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc01g057440.3 38 24 3 2 13 25 16 16 9 10 7 6 17 13 14 Unknown protein Solyc01g057445.1 48 67 138 74 56 49 50 56 100 74 98 62 97 111 72 Mediator of RNA polymerase II transcription subunit 15a (AHRD V3.3 *-* A0A2G2ZG46_CAPAN) Solyc01g057470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057510.2 1 0 6 2 3 5 1 5 3 0 0 1 5 9 0 Bax inhibitor 1 (AHRD V3.3 *** A0A2G2XLQ4_CAPBA) Solyc01g057520.4 378 1095 898 987 1379 1342 1543 1453 878 825 769 1086 537 898 588 ARM repeat superfamily protein (AHRD V3.3 *** F4J550_ARATH) AT3G17340 Solyc01g057523.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc01g057527.1 0 0 6 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc01g057530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 COBRA-like protein 1 (AHRD V3.3 *-* A0A2G2X9E0_CAPBA) Solyc01g150136.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057570.3 422 437 393 481 554 526 501 655 567 607 379 641 604 467 450 alpha-ketoglutarate-dependent dioxygenase alkB homolog 6-like (AHRD V3.3 *** A0A2I4HR29_9ROSI) AT4G20350 Solyc01g057580.1 0 0 1 0 3 0 0 0 0 2 0 1 0 1 2 Protein kinase superfamily protein (AHRD V3.3 *-* A0A2U1PBH2_ARTAN) Solyc01g057585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057590.3 7 1 0 3 0 0 0 0 0 0 0 3 0 0 0 Unknown protein Solyc01g057600.3 41 2 21 4 6 1 3 0 1 7 26 4 3 1 10 Unknown protein Solyc01g057610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057640.1 0 0 0 0 1 5 3 7 0 0 0 0 0 0 0 Unknown protein Solyc01g057660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: uncharacterized protein LOC112191941 (AHRD V3.3 --* XP_024187199.1) Solyc01g057670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DnaJ heat shock n-terminal domain-containing protein (AHRD V3.3 *** A0A2K3NVM9_TRIPR) AT5G18710 Solyc01g057675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057680.4 13 6 19 6 0 1 0 0 0 5 5 0 1 28 7 Unknown protein Solyc01g057690.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell division cycle protein 48-like protein (AHRD V3.3 *-* A0A2G2WIS5_CAPBA) Solyc01g057700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent protein kinase (AHRD V3.3 *** E5GCJ4_CUCME) Solyc01g057703.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2K3NWY8_TRIPR) Solyc01g057705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histidine--tRNA ligase, chloroplastic/mitochondrial (AHRD V3.3 *-* A0A2I4EMG2_9ROSI) Solyc01g057707.1 2 1 0 0 0 0 2 1 1 0 2 0 1 0 15 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3BR55_CAPCH) Solyc01g057740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H protein (AHRD V3.3 *-* A0A2I0V757_9ASPA) Solyc01g057760.4 3249 3366 2728 2729 2564 2529 2886 2897 3278 2649 2486 2449 2981 3420 2927 RNA helicase DEAD2 AT3G06480 Solyc01g057770.3 496 871 4285 1155 913 1141 1020 908 1421 1713 3285 1083 954 910 740 HCO3-transporter family (AHRD V3.3 *** A0A2U1KUW6_ARTAN) Solyc01g057780.3 2172 1698 1116 1757 1080 909 1273 1219 1146 1512 1061 1287 1414 1765 1362 Zinc finger protein VAR3, chloroplastic (AHRD V3.3 *** A0A2G3BZA0_CAPCH) AT5G17790 Solyc01g057785.1 87 92 55 103 56 70 102 66 51 62 78 103 55 114 83 Unknown protein Solyc01g057830.3 754 1623 1837 1408 2236 1860 2125 2317 1978 1170 1399 1614 1152 1488 1651 30S ribosomal protein S1 protein (AHRD V3.3 *** A0A2U1PM45_ARTAN) AT5G30510 Solyc01g057840.3 907 814 675 519 589 668 614 601 688 562 698 614 981 918 756 Nuclear export mediator factor Nemf (AHRD V3.3 *** A0A1J3J1R1_NOCCA) Solyc01g057850.4 377 366 127 143 232 183 151 335 388 316 95 277 335 262 214 nuclear export mediator factor NEMF-like (AHRD V3.3 *** A0A2I4F1S6_9ROSI),Pfam:PF05833 AT5G49930 Solyc01g057853.1 127 57 48 24 23 25 18 16 10 23 7 16 43 53 62 Unknown protein Solyc01g057855.1 1 5 20 11 0 0 0 0 2 1 2 2 5 2 0 Unknown protein Solyc01g057857.1 1 0 0 8 0 1 0 0 1 0 0 1 5 5 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2Y582_CAPAN) Solyc01g057900.3 1679 1597 1516 1657 1716 1714 1777 1663 1720 1653 1451 1561 1782 1701 1677 E3 ubiquitin-protein ligase UPL6 (AHRD V3.3 *** A0A2G3DDX0_CAPCH) AT3G17205 Solyc01g057903.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057907.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc01g057910.3 773 354 144 120 4 12 11 5 105 264 324 142 110 235 307 R2R3MYB transcription factor 2 AT3G06490 Solyc01g057920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g057940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic (AHRD V3.3 *-* A0A2G3D103_CAPCH) Solyc01g057960.3 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 Homeobox leucine-zipper protein (AHRD V3.3 *-* Q8H963_ZINVI) Solyc01g057990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G2XEV3_CAPBA) Solyc01g058003.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc01g058007.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc01g058010.3 505 290 571 420 264 244 252 247 320 409 391 332 308 450 387 Neutral/alkaline invertase (AHRD V3.3 *** G5DC09_MANES) Solyc01g058020.4 109 70 255 175 55 85 67 56 80 71 174 88 122 134 175 Neutral/alkaline invertase (AHRD V3.3 *-* H6V7I6_MANES) Solyc01g058030.2 137 65 35 112 130 212 125 129 54 72 62 173 52 74 61 Gibberellin 2-oxidase (AHRD V3.3 *** A4GVL5_SOLLC) Solyc01g058040.2 45 23 1 20 34 52 13 36 29 34 15 29 23 45 0 gibberellin 2-beta-dioxygenase 2-like (AHRD V3.3 *-* A0A2I4DNY4_9ROSI) Solyc01g058050.1 0 0 3 0 0 0 0 0 3 1 0 1 0 0 0 Unknown protein Solyc01g058060.1 0 0 0 4 1 2 2 10 8 0 0 4 0 1 0 40S ribosomal protein S15-like (AHRD V3.3 --* NP_001274973.1) Solyc01g058070.1 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 nucleosome assembly protein 1-4 (AHRD V3.3 --* XP_004241880.1) Solyc01g058080.1 2 0 0 0 0 0 0 1 0 0 1 0 0 2 0 LOW QUALITY PROTEIN: probable helicase CHR10 (AHRD V3.3 --* XP_010325463.2) Solyc01g058100.2 7 116 98 188 134 157 157 113 86 48 107 96 24 85 33 Unknown protein Solyc01g058120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycerate dehydrogenase HPR, peroxisomal (AHRD V3.3 *-* A0A2G2WJW2_CAPBA) Solyc01g058130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 C2H2-type zinc finger protein (AHRD V3.3 --* NP_001241325.1) Solyc01g058140.3 3152 1830 1411 1438 1118 1148 1214 1236 1597 1834 1489 1442 1718 1711 1828 beta-glycosidase 2 AT3G06510 Solyc01g058160.3 340 191 182 258 242 247 237 270 233 325 247 331 154 259 234 Duf724 domain-containing protein 3 (AHRD V3.3 *** A0A314KQ04_NICAT) Solyc01g058170.4 295 157 181 199 187 296 240 209 192 245 245 215 116 187 340 Agenet domain containing protein (AHRD V3.3 *** A0A2P5F5R4_TREOI) Solyc01g058175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058190.4 549 599 643 476 409 430 376 420 466 423 487 463 539 661 658 30S ribosomal protein S6 (AHRD V3.3 *-* A0A1J3K846_NOCCA) AT3G17170 Solyc01g058200.3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058205.1 120 120 87 89 104 132 107 134 98 100 68 130 104 111 71 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XPG9_CAPBA) AT3G48810 Solyc01g058210.3 309 194 182 309 236 222 225 257 218 182 181 178 170 230 162 Villin (AHRD V3.3 *-* A0A2P5EN25_TREOI) Solyc01g058220.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Rhodanese-like domain-containing protein chloroplastic-like (AHRD V3.3 *-* A0A2K3P8I3_TRIPR) Solyc01g058225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 myosin 1 (AHRD V3.3 --* NP_001104925.1) Solyc01g058240.1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058245.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc01g058250.2 4 5 0 10 0 0 0 0 0 9 0 0 28 7 1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9SYM7_ARATH) Solyc01g058260.4 3833 1744 3430 3414 2264 2749 2860 1772 2398 4189 4480 3377 1678 2049 4655 Nuclear poly(A) polymerase 3 (AHRD V3.3 *** A0A2G3B5G8_CAPCH) AT3G06560 Solyc01g058270.3 117 241 250 392 300 299 350 221 298 302 287 293 246 252 432 O-acetyltransferase family protein (AHRD V3.3 *** A0A2U1M4H7_ARTAN) AT3G06550 Solyc01g058280.4 900 982 912 1001 810 780 791 688 714 766 819 797 1143 1040 959 ER membrane protein complex subunit 6-like (AHRD V3.3 *** A0A2I4GTM2_9ROSI) AT5G49540 Solyc01g058320.4 465 288 445 835 88 129 85 96 435 731 848 226 531 408 1107 transmembrane protein (AHRD V3.3 *-* AT3G17120.5) AT3G17120 Solyc01g058325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058350.1 39 8 1 5 5 8 10 17 9 12 8 10 2 5 0 Unknown protein Solyc01g058360.1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 protein ZINC INDUCED FACILITATOR-LIKE 1-like (AHRD V3.3 *** A0A2I4H204_9ROSI) Solyc01g150137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Helicase-like protein (AHRD V3.3 *-* A0A2K3M0A3_TRIPR) Solyc01g150138.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent DNA helicase (AHRD V3.3 *-* K3YXY4_SETIT) AT3G51700 Solyc01g058380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Coatomer subunit gamma (AHRD V3.3 *-* A0A2G3BVT4_CAPCH) Solyc01g058385.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058390.3 1116 614 460 502 531 508 432 622 633 801 469 570 472 440 584 Galactokinase (AHRD V3.3 *** A0A2G3AJ57_CAPAN) AT3G06580 Solyc01g058400.3 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Transcription factor (AHRD V3.3 *-* A0A1U8FBH1_CAPAN) Solyc01g058450.3 3061 2906 2772 2922 2518 2629 2637 2695 1879 2411 2487 2348 3115 3194 2810 Flowering time control protein FCA (AHRD V3.3 *** A0A2G2XPK6_CAPBA) AT4G16280 Solyc01g058470.1 147 89 37 84 41 62 63 25 60 85 50 93 56 49 7 Unknown protein Solyc01g058520.4 235 139 230 164 145 142 164 82 135 142 154 134 153 165 192 Peroxidase (AHRD V3.3 *** K4AW60_SOLLC) Solyc01g058530.4 92 91 90 80 81 109 101 61 77 71 79 86 69 66 92 Ribosomal protein S18 (AHRD V3.3 *-* A0A2Z5UCK0_CUSJA) Solyc01g058535.1 13 1 2 8 4 3 3 1 14 1 0 7 7 3 2 Unknown protein Solyc01g058540.3 18 14 17 10 8 0 2 5 8 8 13 9 8 7 25 WRKY transcription factor 47 Solyc01g058550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDT domain-containing protein PTM (AHRD V3.3 *-* XP_010313253.1) Solyc01g058590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin-like domain-containing CTD phosphatase (AHRD V3.3 *-* A0A2G2W8N6_CAPBA) Solyc01g058593.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *-* A0A2U1KM29_ARTAN) Solyc01g058597.1 5 9 0 0 3 7 9 0 0 0 0 0 3 2 7 Prefoldin subunit 3 (AHRD V3.3 *-* A0A2G2ZJK0_CAPAN) Solyc01g058660.1 1 1 7 5 1 4 5 5 2 4 0 6 0 0 0 Unknown protein Solyc01g058665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058670.3 890 1870 1572 2620 2642 2804 2728 2498 2392 1627 2005 2057 1781 1884 2181 Transcription factor (AHRD V3.3 *** A0A2G3DG53_CAPCH) AT3G06590 Solyc01g058673.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058677.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g058680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sister chromatid cohesion 1 protein 4 (AHRD V3.3 *-* A0A2G3DGK5_CAPCH) Solyc01g058685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VVU6_9ASPA) ATMG00810 Solyc01g058690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger CCCH domain-containing protein 41-like (AHRD V3.3 *-* A0A2I4HUT1_9ROSI) Solyc01g058700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sister chromatid cohesion 1 protein 4 (AHRD V3.3 *-* A0A2G3DGK5_CAPCH) Solyc01g058705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* XP_010319906.1) Solyc01g058720.4 85 276 121 137 141 129 114 143 208 351 98 113 1308 146 148 Calcium-binding EF-hand (AHRD V3.3 *** A0A2U1NQC6_ARTAN) AT5G49480 Solyc01g058730.4 2601 2128 1674 1683 1826 1667 1476 1782 2186 2504 1743 2193 2179 1934 2192 Transmembrane protein (AHRD V3.3 *** F4JLQ2_ARATH) AT4G16180 Solyc01g058740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP3-like (AHRD V3.3 *-* XP_010315661.1) Solyc01g059740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP3-like (AHRD V3.3 *** XP_019067583.1) Solyc01g059750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RRM_1 domain-containing protein/NTF2 domain-containing protein (AHRD V3.3 --* A0A1Q3C3M0_CEPFO) Solyc01g059760.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 sentrin-specific protease 2-like isoform X1 (AHRD V3.3 --* XP_024160256.1) Solyc01g059765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g059780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP3-like (AHRD V3.3 *-* XP_019067583.1) Solyc01g059800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g059810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g059820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g059830.3 394 398 398 302 401 340 349 340 457 474 377 396 500 369 436 Enoyl-CoA hydratase (AHRD V3.3 *** A0A1Y1IHV1_KLENI) AT4G16210 Solyc01g059840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2U1MC12_ARTAN) Solyc01g059850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *-* A0A1U8GC96_CAPAN) Solyc01g059860.3 2013 1128 835 925 1092 1029 1067 1066 930 1022 881 931 839 932 756 MAP kinase kinase kinase 3 AT3G06620 Solyc01g059870.4 875 1309 1001 1508 1810 1832 1728 2067 2241 1226 974 1245 1051 1083 1192 phytochrome B1 AT2G18790 Solyc01g059880.3 842 1298 799 992 1139 1084 1101 1383 1270 1115 872 1093 1289 1145 623 Citrate synthase-like (AHRD V3.3 *** A0A200R252_9MAGN) AT5G49460 Solyc01g059885.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3JVA4_COCAP) Solyc01g059900.4 0 1 0 0 1 0 0 4 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** K4AW97_SOLLC) Solyc01g059910.2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase FERONIA (AHRD V3.3 *** A0A2G3C1K8_CAPCH) AT3G04690 Solyc01g059920.4 295 370 399 305 523 546 605 491 311 270 329 378 311 436 282 Nucleic acid-binding, OB-fold (AHRD V3.3 *** A0A2U1P485_ARTAN) AT3G17030 Solyc01g059930.3 2972 1575 2089 2117 1079 946 973 1047 1758 2457 2118 1282 2649 1947 2638 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** Q9M9P5_ARATH) AT3G17020 Solyc01g059940.2 9 5 10 3 5 4 0 0 20 9 0 0 27 11 7 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *-* F4JC28_ARATH) AT3G36659 Solyc01g059950.1 24 21 15 26 5 11 0 3 41 30 4 1 60 47 70 Transcription factor GRAS (AHRD V3.3 *-* A0A200PWC4_9MAGN) Solyc01g059960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor GRAS (AHRD V3.3 *** A0A200PWC4_9MAGN) Solyc01g059965.1 1 0 0 1 0 0 0 0 0 0 0 0 1 1 4 Glucan endo-1,3-beta-glucosidase B (AHRD V3.3 *** E13B_SOLLC) AT4G16260 Solyc01g060010.3 4 6 0 9 0 0 0 0 0 0 0 0 0 1 20 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A2G3BH97_CAPCH) Solyc01g060015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *-* A0A2I0XDS5_9ASPA) Solyc01g060020.4 13 2 0 17 0 0 0 0 0 0 0 0 4 10 15 beta-1,3-glucanase TOMB13GLUB AT4G16260 Solyc01g060030.3 1593 1463 1354 934 1203 1181 1179 1124 1282 915 1460 1129 1332 1213 1543 Zinc finger CCHC domain-containing protein 10 (AHRD V3.3 *** A0A2G3ART8_CAPCH) AT5G49400 Solyc01g060040.3 523 498 674 642 556 714 776 591 553 357 725 540 394 803 776 WD40 domain-containing protein/Bromodomain domain-containing protein (AHRD V3.3 *** A0A1Q3BSD0_CEPFO) Solyc01g060050.3 88 180 88 135 144 168 161 198 227 150 93 172 131 160 112 WD40 domain-containing protein (AHRD V3.3 *** A0A2K3NUT6_TRIPR) Solyc01g060053.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc01g060055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g060057.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g060070.3 242 169 174 247 252 175 186 208 190 265 205 286 268 240 222 Outer envelope pore protein 16-2, chloroplastic (AHRD V3.3 *** A0A2G2XR36_CAPBA),Pfam:PF02466 AT4G16160 Solyc01g060080.4 723 435 585 516 381 527 540 343 390 407 537 326 376 558 580 serine/threonine-protein phosphatase 4 regulatory subunit 3-like (AHRD V3.3 *-* A0A2I4F1X2_9ROSI) AT5G49390 Solyc01g060090.1 144 106 76 59 87 56 80 70 80 84 44 101 23 70 48 serine/threonine-protein phosphatase 4 regulatory subunit 3-like (AHRD V3.3 *-* A0A2I4F1X2_9ROSI) Solyc01g060100.2 9 9 1 10 0 11 9 14 7 9 2 8 5 6 6 serine/threonine-protein phosphatase 4 regulatory subunit 3-like (AHRD V3.3 --* XP_004229001.1) Solyc01g060130.3 143 199 197 161 226 212 268 164 163 125 238 299 469 288 258 TOMGTPASE Mill. GTPase Solyc01g060140.4 3757 2382 2589 2467 1649 2008 2100 1834 2428 2408 2248 1888 2543 2429 3229 Calmodulin-binding transcription activator 5 (AHRD V3.3 *-* A0A2G2XR50_CAPBA) Solyc01g060160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mitochondrial-processing peptidase subunit beta (AHRD V3.3 *-* A0A2G3B7D4_CAPCH) Solyc01g060170.4 441 465 204 210 293 221 198 351 492 455 137 325 254 367 219 Calmodulin-binding transcription activator (AHRD V3.3 *-* A0A1I9LRY6_ARATH) Solyc01g060180.4 842 775 569 598 583 535 497 667 646 713 503 604 519 571 532 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200R265_9MAGN) AT3G16910 Solyc01g060183.1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *** A0A2U1QJI6_ARTAN) Solyc01g060187.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g060200.3 100 107 192 122 92 121 133 95 48 65 98 86 56 74 119 3'-5' exonuclease domain (AHRD V3.3 *** A0A200QLJ1_9MAGN) Solyc01g060210.4 145 99 110 87 55 65 61 52 64 46 75 75 15 92 89 XH/XS domain-containing protein (AHRD V3.3 *-* Q9M150_ARATH) Solyc01g150139.1 31 12 6 0 7 3 3 8 8 4 16 10 7 19 17 Unknown protein Solyc01g060220.1 2 0 1 0 0 1 0 0 0 0 0 2 0 0 0 Unknown protein Solyc01g060240.4 199 336 394 467 418 453 584 364 464 350 550 403 312 261 468 Unknown protein Solyc01g060250.2 123 80 56 106 79 93 94 84 99 144 53 78 68 105 58 Unknown protein Solyc01g060260.4 0 0 9 4 0 6 2 2 5 3 0 5 0 1 5 Glycine-rich protein family (AHRD V3.3 *-* AT5G49350.2) Solyc01g060270.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 Protein trichome birefringence (AHRD V3.3 *** A0A2G3BHS7_CAPCH) AT5G49340 Solyc01g060280.4 392 441 527 523 385 319 392 436 445 589 482 422 723 498 448 AMSH-like ubiquitin thioesterase 1 (AHRD V3.3 *** A0A2G2XPY5_CAPBA) Solyc01g060310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A0A2K3MRY7_TRIPR) Solyc01g060340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoglucanase (AHRD V3.3 *-* A0A328DEK8_9ASTE) Solyc01g060350.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc01g150140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *** B6SN49_MAIZE) Solyc01g060370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-binding pseudobarrel domain-containing protein (AHRD V3.3 *** A0A2U1N862_ARTAN) Solyc01g060375.1 1045 703 391 312 75 88 163 15 455 642 507 473 200 527 366 Unknown protein Solyc01g060390.1 0 1 0 1 1 1 1 0 0 0 0 5 0 0 0 UQ_con domain-containing protein (AHRD V3.3 *-* A0A1Q3CAP2_CEPFO) Solyc01g060395.1 0 7 3 13 22 17 14 14 5 12 0 14 0 4 0 Unknown protein Solyc01g060410.4 59 495 413 662 1092 1058 1015 1105 537 304 406 621 94 316 295 GPI-anchored adhesin-like protein (AHRD V3.3 *** Q9M2F2_ARATH) AT5G26910 Solyc01g060420.2 61 184 103 123 174 141 102 104 293 228 128 135 102 103 68 Zinc finger protein 8 (AHRD V3.3 *** A0A2G2XR52_CAPBA) AT5G43540 Solyc01g060430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B-cell receptor-associated protein 31-like protein (AHRD V3.3 --* AT5G48660.1) Solyc01g060450.3 24 30 78 35 75 48 38 20 15 26 79 10 12 16 20 transmembrane protein%2C putative (DUF1218) (AHRD V3.3 *** AT5G49320.1) AT5G49320 Solyc01g060460.2 31 28 26 36 31 40 43 71 32 22 52 43 14 22 6 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT1G05490 Solyc01g060470.3 3108 4468 2916 3179 4025 3897 3914 4540 3100 3097 2742 3213 4981 4027 2975 Importin subunit alpha (AHRD V3.3 *** A0A2G3DFJ0_CAPCH) Solyc01g060490.4 0 3 0 8 2 0 8 1 2 0 0 2 0 9 7 GATA transcription factor 23 (AHRD V3.3 *** A0A2G2VJP8_CAPBA) Solyc01g065490.4 758 364 543 441 291 319 333 254 403 273 524 302 386 469 1282 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) Solyc01g065500.3 374 490 633 393 312 220 202 222 505 448 565 326 610 500 592 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061EZM2_THECC) AT5G17980 Solyc01g065510.3 1196 3346 5943 4105 4089 3317 3052 3269 1845 4215 7448 2819 2065 1670 2213 leucine-rich repeat extensin-like protein 6 (AHRD V3.3 *-* XP_010321602.1) Solyc01g065530.3 1613 2039 2842 1424 2315 2259 2097 2578 1663 1715 8728 2569 1139 1107 2091 COBRA-like protein (AHRD V3.3 *** A0A2G3AIT3_CAPAN) AT4G16120 Solyc01g065540.3 3543 2195 1942 1451 2681 2486 2559 2885 2174 2253 2519 2629 2801 1833 1490 Two-component response regulator (AHRD V3.3 *** A0A2G3DGB4_CAPCH) AT4G16110 Solyc01g065545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc01g065550.3 344 236 434 358 210 315 301 278 324 309 406 270 365 333 376 Dehydration-induced 19-like protein (AHRD V3.3 *** E3T7S4_GOSHI) AT5G49230 Solyc01g065560.4 432 483 499 437 403 492 379 413 394 522 401 401 478 450 314 DUF789 domain-containing protein (AHRD V3.3 *** A0A1Q3DF52_CEPFO) AT4G16100 Solyc01g065570.2 6 1 0 4 0 6 1 1 2 0 4 8 0 1 0 DnaJ domain-containing protein (AHRD V3.3 *** A0A1Q3B8J9_CEPFO) AT3G06778 Solyc01g065580.4 2147 2507 1740 1612 1521 1342 1410 1475 1617 1267 1180 1644 2740 2499 1610 Pumilio-like protein 24 (AHRD V3.3 *** A0A2G2XR42_CAPBA) AT3G16810 Solyc01g065585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* A0A1U8QCJ1_CAPAN) Solyc01g065610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* A0A1U8QCJ1_CAPAN) Solyc01g065620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* A0A1U8QCJ1_CAPAN) Solyc01g065625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc01g065630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* U6EJ31_LINPH) Solyc01g065640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* A0A1U8QCJ1_CAPAN) Solyc01g065643.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 WD repeat-containing protein 43 (AHRD V3.3 --* XP_004231570.1) Solyc01g065647.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD repeat-containing protein 43 (AHRD V3.3 *-* XP_004231570.1) Solyc01g065650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* F4K6D8_ARATH) Solyc01g065660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 --* AT3G13340.3) Solyc01g065670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* A0A1P8BF16_ARATH) Solyc01g065680.2 2323 814 505 1500 499 542 793 685 445 1721 1071 730 533 641 504 Unknown protein Solyc01g065690.3 575 681 586 794 703 686 646 516 458 483 539 217 696 475 745 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6PJM0_ACTCH) Solyc01g065700.3 4 0 1 22 0 1 0 0 4 0 2 1 1 2 34 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1N538_ARTAN) Solyc01g065710.3 152 169 244 203 171 195 196 151 113 181 275 122 192 241 239 CST complex subunit TEN1 (AHRD V3.3 *** A0A2G3AIU0_CAPAN) AT1G56260 Solyc01g065720.4 798 606 599 695 530 733 670 514 706 604 635 582 637 787 733 Phospholipase (AHRD V3.3 *** A0A2I4F1X9_9ROSI) AT3G16785 Solyc01g065725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g065740.3 153 100 186 105 120 137 148 73 59 64 108 134 167 156 169 F-box/RNI-like superfamily protein (AHRD V3.3 *** F4KDV0_ARATH) AT3G18150 Solyc01g065750.2 28 7 21 31 0 9 1 6 13 19 31 10 10 30 7 Unknown protein Solyc01g065810.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 7 (AHRD V3.3 *-* A0A1B3IYY1_9LILI) Solyc01g065840.4 1209 840 1127 1114 990 1037 1073 756 633 725 957 782 697 965 1091 F-box/RNI-like superfamily protein (AHRD V3.3 *** A0A178U7Y7_ARATH) AT3G18150 Solyc01g065845.1 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc01g065900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 trihelix transcription factor ASR3-like (AHRD V3.3 *** A0A2I4FCD1_9ROSI) Solyc01g065903.1 0 1 1 0 6 0 0 4 4 1 0 0 0 0 0 protein PELPK1-like (AHRD V3.3 *-* XP_019068397.1) Solyc01g065907.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein PELPK1-like (AHRD V3.3 *** XP_019068397.1) Solyc01g065910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nucleoporin autopeptidase (AHRD V3.3 *-* AT1G10390.3) Solyc01g065930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g065960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 gamma-interferon-responsive lysosomal thiol protein (AHRD V3.3 *-* XP_004240418.1) Solyc01g065970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g065980.4 4894 3040 3073 3284 1906 1892 1647 2061 2389 3199 2952 3946 3261 4000 2677 Ethylene Response Factor E.4 AT3G16770 Solyc01g065983.1 1 1 0 5 11 2 10 0 0 0 0 3 0 0 0 Zinc finger CCCH domain-containing protein 53-like (AHRD V3.3 *-* A0A2K3PKI8_TRIPR) Solyc01g150141.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc01g065987.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc01g066020.3 7 2 5 8 2 6 0 0 8 5 1 10 15 5 17 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2U1PW75_ARTAN) Solyc01g066040.2 121 42 85 104 0 14 12 3 53 80 101 8 55 48 213 Unknown protein Solyc01g066050.3 783 1168 1061 1008 1395 1195 1061 1413 1334 1205 1010 1251 1004 955 707 Tetratricopeptide repeat-containing domain (AHRD V3.3 *** A0A200PWL4_9MAGN) AT3G16760 Solyc01g066055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polyprotein (AHRD V3.3 *-* Q9ZS84_SOLLC) Solyc01g066060.4 490 522 398 454 518 425 397 456 397 456 342 495 554 519 308 Multiple organellar RNA editing factor 3, mitochondrial (AHRD V3.3 *** A0A2G3AIV4_CAPAN) AT3G06790 Solyc01g066065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc01g066070.3 0 0 1 0 0 0 7 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** F4JQS2_ARATH) AT4G18180 Solyc01g066080.3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4GJH4_9ROSI) Solyc01g066090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4DPZ1_9ROSI) Solyc01g066100.2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4GJH4_9ROSI) Solyc01g066110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4GJH4_9ROSI) Solyc01g066115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A218XG81_PUNGR) Solyc01g066120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4GJH4_9ROSI) Solyc01g066130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 crocetin glucosyltransferase, chloroplastic-like (AHRD V3.3 *-* XP_004229323.3) Solyc01g066140.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A1Q3BPF3_CEPFO) Solyc01g066145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4GJH4_9ROSI) Solyc01g066150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4GJH4_9ROSI) Solyc01g066160.1 58 18 39 46 2 3 2 0 16 30 6 11 15 17 18 Unknown protein Solyc01g066190.1 1 0 0 0 0 0 0 0 1 8 0 0 0 2 0 Unknown protein Solyc01g066200.1 50 17 27 17 0 5 0 2 5 54 40 18 15 31 47 Unknown protein Solyc01g150142.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc01g066205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc01g150143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc01g066235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066260.2 9 9 0 13 0 0 0 0 0 2 0 0 10 12 12 Unknown protein Solyc01g066270.3 4 0 0 1 0 0 0 0 2 0 0 0 6 0 0 Unknown protein Solyc01g066280.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066290.2 34 13 15 38 0 0 0 0 1 23 7 2 12 27 154 Unknown protein Solyc01g066293.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066297.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 4-like (AHRD V3.3 *-* XP_010319895.2) Solyc01g066310.4 1560 1060 1214 1004 595 698 740 732 1164 1374 1166 860 1376 1364 1208 Acyl-CoA dehydrogenase family member 10 (AHRD V3.3 *** A0A1J3CLI6_NOCCA) AT3G06810 Solyc01g066320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066340.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066345.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc01g066350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066360.3 0 11 23 4 10 0 5 5 0 3 0 5 3 0 0 Pectinesterase (AHRD V3.3 *** A0A2G3DFT1_CAPCH) AT5G27870 Solyc01g066420.3 0 12 38 0 0 0 4 4 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G2XPD2_CAPBA) Solyc01g066425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A2G3DFP5_CAPCH) Solyc01g066410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A2G3DFP5_CAPCH) Solyc01g066380.4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc01g066390.4 0 4 27 0 0 0 6 1 0 1 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A2G3DFP5_CAPCH) Solyc01g066430.3 2035 1048 1860 373 231 306 216 200 347 492 2777 911 823 739 1602 RING-H2 finger protein ATL2-like (AHRD V3.3 *** A0A2I4E8K9_9ROSI) AT3G16720 Solyc01g066440.3 266 590 882 810 661 747 628 671 519 391 591 896 327 698 445 hypothetical protein (AHRD V3.3 *** AT3G06840.1) AT3G06840 Solyc01g066445.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc01g066450.3 59 59 57 35 75 78 90 68 48 40 79 60 42 51 54 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1Q133_ARTAN) Solyc01g150144.1 32 3 37 33 2 12 6 4 10 44 33 3 6 4 1 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MWY4_ARTAN) Solyc01g066455.1 0 5 0 5 10 12 4 4 6 9 0 2 1 1 0 Fumarylacetoacetate (FAA) hydrolase family (AHRD V3.3 --* AT3G16700.1) Solyc01g066457.1 53 27 33 102 74 41 31 26 21 92 41 34 10 25 33 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MWY4_ARTAN) Solyc01g066480.3 411 484 444 509 520 421 415 590 605 599 366 531 777 626 446 Fumarylacetoacetate hydrolase family (AHRD V3.3 *** A0A1Y1HN88_KLENI) AT4G15940 Solyc01g066490.2 87 51 75 56 35 46 66 24 32 46 72 43 44 21 76 Unknown protein Solyc01g066500.1 2 9 7 7 5 14 16 14 7 7 32 7 12 4 2 Transcription factor, MADS-box (AHRD V3.3 *-* A0A2U1QC70_ARTAN) Solyc01g066510.3 0 8 2 22 32 34 33 20 2 5 10 7 8 10 0 Protein GAMETE EXPRESSED 2 (AHRD V3.3 *** A0A2G3AJS1_CAPAN) AT5G49150 Solyc01g066520.3 439 423 417 299 329 336 323 347 423 451 413 355 357 405 266 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (AHRD V3.3 *** A0A024B875_SOLTU) AT3G06850 Solyc01g066560.3 0 0 0 8 0 0 0 0 13 6 0 0 0 0 137 Protein DETOXIFICATION (AHRD V3.3 *** A0A2G3DGJ0_CAPCH) AT5G49130 Solyc01g066570.3 967 485 389 776 257 271 222 210 241 646 455 648 569 507 585 FCS-Like Zinc finger 15 (AHRD V3.3 *-* FLZ15_ARATH) AT5G49120 Solyc01g066575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc01g066590.3 1372 1066 1487 1367 1840 1769 1723 1581 1238 1489 1742 1318 969 970 1232 Dynein light chain (AHRD V3.3 *** A0A2G3DI71_CAPCH) AT4G15930 Solyc01g066610.4 34 201 229 270 270 347 377 301 253 83 170 248 111 294 178 Fanconi anemia group I protein (AHRD V3.3 *** A0A2I4F1R6_9ROSI) AT5G49110 Solyc01g066612.1 178 101 152 134 97 132 111 74 104 85 196 90 78 140 263 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G3C774_CAPCH) Solyc01g066614.1 138 129 89 114 126 121 87 97 140 127 129 93 76 102 86 Guanylate-binding family protein (AHRD V3.3 *-* A0A2U1PP48_ARTAN) Solyc01g066616.1 54 41 45 59 13 28 23 17 33 39 12 32 10 34 77 replication protein A 70 kDa DNA-binding subunit B-like (AHRD V3.3 *** A0A2I4FHD9_9ROSI) Solyc01g066618.1 6 7 4 5 13 4 6 1 15 4 1 7 1 7 7 Unknown protein Solyc01g066620.4 159 116 102 150 133 230 195 188 131 119 113 182 176 138 224 Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a (AHRD V3.3 *** A0A2G3AJZ7_CAPAN) Solyc01g066625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc01g066630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066640.2 4885 2382 1798 1721 2842 2423 2403 2737 2039 3681 2361 3186 1496 1791 1257 Vitellogenin-like protein (AHRD V3.3 *-* Q9FH24_ARATH) AT5G49100 Solyc01g066650.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4GCM5_9ROSI) Solyc01g066660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc01g066670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc01g066680.3 12 0 26 1 2 0 1 0 0 2 15 4 0 7 1 Pollen Ole e 1 allergen and extensin family protein (AHRD V3.3 *** A0A2U1NI15_ARTAN) AT3G16660 Solyc01g066690.3 838 992 899 846 950 1110 1078 1248 837 730 813 789 1230 1043 942 Eukaryotic translation initiation factor 2 subunit 3 (AHRD V3.3 *** A0A1U8HGG1_CAPAN) AT1G04170 Solyc01g066700.4 64 37 41 38 12 13 2 8 23 13 46 17 36 37 132 UDP-glucuronic acid decarboxylase (AHRD V3.3 *** G5DXR5_SILLA) Solyc01g066710.4 2 8 32 4 4 3 3 3 4 11 25 6 13 8 29 UDP-glucuronic acid decarboxylase 4 (AHRD V3.3 *-* A0A2G2VJP5_CAPBA) Solyc01g066720.3 642 817 1533 989 1200 1158 1207 1022 891 802 1576 840 1481 999 1150 Hypoxia-responsive family protein (AHRD V3.3 *** S8D7L7_9LAMI) AT3G05550 Solyc01g066730.4 9 35 23 26 22 18 27 25 22 35 11 35 24 34 33 Transcription factor, MADS-box (AHRD V3.3 *-* A0A2U1LSQ9_ARTAN) Solyc01g066740.3 1130 1651 1444 1685 1745 1604 1525 1735 2135 2137 1424 1779 1868 1969 1612 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* A0A2U1LEC3_ARTAN) AT3G06880 Solyc01g066750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066760.2 2 16 4 3 9 12 9 12 8 3 3 6 14 8 13 Unknown protein Solyc01g066770.3 316 285 383 396 238 319 354 238 332 275 384 262 397 490 576 Chaperone protein dnaJ 49 (AHRD V3.3 *** A0A2G3B5J1_CAPCH) AT5G49060 Solyc01g066775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc01g066790.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 11 Unknown protein Solyc01g066800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin (AHRD V3.3 *-* B1NJ25_OPUST) Solyc01g066810.4 0 1 19 3 0 0 7 5 0 0 0 0 0 0 0 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** O82240_ARATH) Solyc01g066820.4 59 88 124 129 90 101 141 86 104 75 148 92 88 139 116 Kinesin-like protein (AHRD V3.3 *** A0A2G3CJ78_CAPCH) AT3G16630 Solyc01g066830.3 729 618 435 525 406 379 320 492 461 566 312 478 551 520 468 Ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** A0A1U8EF37_CAPAN) AT4G15880 Solyc01g066840.3 2162 4516 4841 3918 4715 4777 5049 4135 3210 2707 3537 3547 5681 5185 3957 40S ribosomal protein S21 (AHRD V3.3 *** A0A1U8E7W4_CAPAN) AT5G27700 Solyc01g066850.4 28 43 55 64 58 23 40 35 40 60 58 15 25 5 57 WAT1-related protein (AHRD V3.3 *** K4AWT5_SOLLC) AT4G01440 Solyc01g066860.3 263 457 923 704 636 487 458 222 427 420 1183 272 286 433 880 hypothetical protein (AHRD V3.3 *** AT1G63310.1) AT1G63310 Solyc01g150145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc01g066870.3 203 316 203 314 296 262 259 332 333 331 175 240 274 202 189 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1QFI0_ARTAN) AT3G16560 Solyc01g066880.3 462 147 407 372 114 135 108 59 136 157 462 66 207 171 520 heavy metal-associated isoprenylated plant protein 3-like (AHRD V3.3 *** A0A2G3ALM1_CAPAN) AT5G27690 Solyc01g066890.2 2 6 2 3 0 0 0 0 1 0 0 0 0 0 0 Kinesin-4 (AHRD V3.3 *-* A0A2G3CDB4_CAPCH) Solyc01g066895.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc01g066900.4 214 427 346 448 651 692 649 788 357 401 264 528 160 364 210 uveal autoantigen with coiled-coil/ankyrin (AHRD V3.3 *** AT4G15790.1) AT4G15790 Solyc01g066905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc01g066910.3 58 230 144 265 1273 1312 1277 955 93 335 121 257 462 180 97 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein (AHRD V3.3 *** A0A2P5CY45_TREOI) AT5G48485 Solyc01g066915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional nitrilase/nitrile hydratase NIT4B (AHRD V3.3 *-* A0A2G2VPR2_CAPBA) Solyc01g066940.3 406 229 252 232 212 252 225 146 229 231 171 169 339 266 286 Vesicle-associated membrane protein (AHRD V3.3 *** A0A1U8E616_CAPAN) AT4G15780 Solyc01g066950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flowering-promoting factor 1 (AHRD V3.3 *** A0A1U8FE64_CAPAN) AT5G24860 Solyc01g066970.2 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 Flowering-promoting factor 1 (AHRD V3.3 *** A0A1U8FE64_CAPAN) AT5G24860 Solyc01g066980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flowering-promoting factor 1 (AHRD V3.3 *** A0A1U8FMN5_CAPAN) AT5G24860 Solyc01g066990.1 7 1 1 1 2 1 1 3 0 5 0 5 0 1 0 Unknown protein Solyc01g067000.4 1881 1215 1098 740 664 573 465 648 1134 1073 1317 985 1321 1039 1081 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* F4JK83_ARATH) AT3G16510 Solyc01g067005.1 0 0 1 1 0 0 0 0 0 0 0 0 4 0 0 Unknown protein Solyc01g067010.3 448 203 147 162 77 66 53 52 48 285 386 152 119 94 261 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) AT3G06240 Solyc01g067020.4 417 225 116 72 0 0 0 0 13 87 32 14 192 125 103 Atypical receptor-like kinase 1 (AHRD V3.3 *** C5H8K0_SOLLC) Solyc01g067030.2 182 166 144 158 83 127 118 116 94 121 89 86 108 189 70 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) AT3G23880 Solyc01g067040.2 36 150 212 171 259 241 217 227 216 128 169 275 130 211 81 Tudor/PWWP/MBT superfamily protein (AHRD V3.3 *-* A0A1I9LQQ5_ARATH) Solyc01g067045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) ATMG00240 Solyc01g067070.3 832 541 833 568 723 834 811 630 457 598 819 616 517 584 801 Mitochondrial carrier protein (AHRD V3.3 *** A0A200QX10_9MAGN) AT5G48970 Solyc01g067080.3 151 203 229 237 222 279 269 197 181 146 253 186 300 255 281 dynein beta chain%2C ciliary protein (AHRD V3.3 *** AT3G21400.1) AT3G21400 Solyc01g067090.4 585 774 987 980 692 873 876 787 686 700 895 790 709 812 829 Arginine-glutamic acid dipeptide repeat protein (AHRD V3.3 *-* Q8GZA1_ARATH) AT2G47820 Solyc01g067100.4 2821 1807 2035 2180 1619 1761 1911 1712 2487 1889 2161 1808 2324 2407 2663 Cullin (AHRD V3.3 *** A0A200Q1J8_9MAGN) AT4G02570 Solyc01g067120.4 29 29 44 17 1 1 1 3 15 18 26 1 63 19 19 cullin-1-like (AHRD V3.3 *-* A0A2I4G9U1_9ROSI) Solyc01g067130.4 40 23 31 16 22 12 11 13 15 15 16 35 4 6 17 Nuclear transcription factor Y subunit B (AHRD V3.3 *** A0A2G2X323_CAPBA) Solyc01g067140.2 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 Cullin (AHRD V3.3 *** A0A200Q1J8_9MAGN) Solyc01g067145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase EXL3 (AHRD V3.3 *-* A0A2G3CQL4_CAPCH) Solyc01g067150.1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: probable disease resistance protein (AHRD V3.3 *-* XP_025884568.1) Solyc01g067160.4 52 20 20 44 66 62 41 36 36 21 45 20 63 54 70 AAA+ ATPase domain-containing protein (AHRD V3.3 *-* A0A2U1KZ76_ARTAN) Solyc01g067170.1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 Cullin (AHRD V3.3 *-* A0A200Q1J8_9MAGN) Solyc01g067173.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc01g067177.1 1 2 0 0 0 0 3 3 1 0 0 7 0 1 1 Unknown protein Solyc01g067200.1 3 7 17 8 11 9 7 3 9 0 8 0 10 7 9 Cullin 1 (AHRD V3.3 *-* A0A1J1EDP0_PETHY) AT1G59800 Solyc01g067190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2G2ZET2_CAPAN) Solyc01g067210.4 22 42 19 46 53 25 29 38 41 18 59 30 45 66 44 Cullin (AHRD V3.3 *-* A0A200Q1J8_9MAGN) Solyc01g067220.1 12 15 2 16 10 6 7 7 11 7 1 1 9 16 13 Unknown protein Solyc01g067230.4 57 36 25 59 37 31 39 22 43 26 18 22 39 77 62 Cullin 1 (AHRD V3.3 *-* A0A1J1EDP0_PETHY) Solyc01g067250.3 129 84 88 141 86 84 133 67 57 68 109 74 148 149 145 Cullin 1 (AHRD V3.3 *-* A0A1J1EDP0_PETHY) Solyc01g067255.1 36 67 46 43 61 48 78 72 65 51 39 56 37 64 31 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc01g067270.4 321 220 231 273 148 252 261 210 219 199 278 190 178 254 330 Cullin (AHRD V3.3 *-* A0A200Q1J8_9MAGN) Solyc01g067280.3 431 192 211 275 174 161 141 130 214 317 249 218 207 240 259 F-box-like protein (AHRD V3.3 *** AT4G15563.9) AT4G15563 Solyc01g067290.3 212 572 558 441 924 860 850 1031 509 414 412 624 327 388 263 Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic (AHRD V3.3 *** A0A2G2XQY6_CAPBA) Solyc01g067300.3 68 7 34 26 0 1 1 0 5 5 45 0 21 56 83 CASP-like protein (AHRD V3.3 *-* A0A0K9RZ96_SPIOL) AT4G15610 Solyc01g067295.1 840 888 2115 2130 282 263 242 90 1375 1269 3639 1170 1000 1515 1818 Fruit-specific protein (AHRD V3.3 *** A0A2G2VKF4_CAPBA) Solyc01g067320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2K3NZ00_TRIPR) Solyc01g067330.3 25 7 6 0 0 0 0 0 8 3 25 3 9 1 0 CASP-like protein (AHRD V3.3 *** A0A2G3DII6_CAPCH) AT4G15630 Solyc01g067340.3 0 0 0 0 5 12 5 5 9 0 1 2 1 0 0 bHLH transcription factor 075 Solyc01g067350.4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** R9WWA4_SOLLC) Solyc01g067360.3 164 69 142 111 248 226 208 222 45 118 134 119 45 80 72 E3 ubiquitin-protein ligase MIEL1-like (AHRD V3.3 *** A0A1S4C6Z0_TOBAC) AT5G18650 Solyc01g067370.3 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 TSB Solyc01g067380.4 787 400 361 349 323 257 307 314 310 652 414 473 387 325 386 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q6DBI3_ARATH) Solyc01g067390.4 6786 5429 5206 3628 4383 4872 4472 4810 4959 4990 4194 4590 5361 5460 5644 RNA helicase DEAH-box1 AT5G18620 Solyc01g067400.3 749 906 1155 909 1125 1176 1050 1010 1112 883 1094 1071 1130 1054 985 Serine/threonine-protein kinase PBS1 (AHRD V3.3 *** A0A2G2XQZ3_CAPBA) AT5G18610 Solyc01g067403.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc01g067407.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc01g067410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2I4HU58_9ROSI) Solyc01g067420.4 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 Pectinesterase (AHRD V3.3 *-* K4FZQ6_9BRAS) Solyc01g067440.4 14 13 15 37 1 0 1 0 3 1 4 4 1 1 72 Glutaredoxin (AHRD V3.3 *** A0A2G9GSG9_9LAMI) AT3G21460 Solyc01g067443.1 18 19 31 20 33 41 23 17 8 17 11 18 20 15 10 Unknown protein Solyc01g067445.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g067447.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g067460.3 22 4 9 52 0 0 0 0 1 3 0 1 7 10 120 monothiol glutaredoxin-S2-like (AHRD V3.3 *** A0A1U7VLQ4_NICSY) AT4G15700 Solyc01g067480.4 610 697 871 870 904 1036 1035 1097 872 840 739 947 720 863 692 Acyl-CoA-binding domain-containing protein 4-like (AHRD V3.3 *** A0A2K3NUA0_TRIPR) AT5G18590 Solyc01g067490.4 552 768 587 858 637 626 629 650 597 495 504 515 886 784 762 Anaphase-promoting complex subunit 7 (AHRD V3.3 *-* A0A1U8E4C9_CAPAN) Solyc01g067500.3 2478 1809 1472 1427 1855 1636 1582 2140 1752 1775 1339 1889 1479 1719 1436 Serine/threonine protein phosphatase 2A regulatory subunit B subunit gamma-like protein (AHRD V3.3 *** A0A2K3PGU2_TRIPR) AT5G18580 Solyc01g067510.3 60 113 261 224 144 149 165 143 114 63 198 151 32 82 158 receptor-like protein kinase FERONIA (AHRD V3.3 *** A0A2I4F2T3_9ROSI) Solyc01g067520.3 0 0 2 0 0 2 0 0 1 2 0 0 0 0 1 Cellulose synthase (AHRD V3.3 *** A0A200PS93_9MAGN) AT4G38190 Solyc01g067530.3 926 852 721 782 697 760 818 901 727 740 588 687 543 886 1239 GTPase OBG (AHRD V3.3 *** A0A2K3PK04_TRIPR) AT5G18570 Solyc01g067540.2 76 192 13 21 231 182 202 254 176 154 130 156 248 23 28 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3DID8_CAPCH) AT5G18560 Solyc01g067550.3 3745 3647 5020 7012 4995 5694 6149 4739 3733 4524 5322 4950 3659 4320 5421 Zinc finger transcription factor 8 AT5G18550 Solyc01g067560.3 1384 928 793 876 893 906 812 1065 936 979 654 981 631 860 720 Protein always early 3 (AHRD V3.3 *** A0A1J6HVB4_NICAT) AT3G21430 Solyc01g067570.3 1416 683 590 972 423 440 507 414 501 834 646 538 603 633 631 E3 ubiquitin-protein ligase RING1-like (AHRD V3.3 *** A0A2G3BK63_CAPCH) Solyc01g067580.4 421 453 418 439 460 438 364 433 356 346 381 359 437 346 326 E3 ubiquitin-protein ligase (AHRD V3.3 *** AT5G18540.4) AT5G18540 Solyc01g067590.3 655 903 764 684 814 813 799 863 657 724 726 759 874 829 693 Sucrose nonfermenting 4-like protein (AHRD V3.3 *** A0A2G2XRA5_CAPBA) Solyc01g067600.3 1605 1161 1299 1008 937 1139 1138 1092 1413 950 1155 998 864 1184 1107 Zinc finger, CW-type (AHRD V3.3 *-* A0A2U1Q0A5_ARTAN) Solyc01g067620.3 62 31 55 109 4 7 15 5 80 40 36 12 28 73 48 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MX13_ARTAN) AT3G21420 Solyc01g067630.3 269 486 475 583 522 591 563 660 491 382 430 494 384 463 426 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q8VZB1_ARATH) AT2G39080 Solyc01g067640.3 567 1457 1302 1339 1365 1447 1454 1579 1288 853 898 1266 1229 1479 866 Protein kinase domain (AHRD V3.3 *** A0A200Q1N4_9MAGN) AT1G54610 Solyc01g067650.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 classical arabinogalactan protein 9 isoform X1 (AHRD V3.3 --* XP_006594475.1) Solyc01g067660.3 4591 2727 503 1600 2964 2192 2308 2966 1713 3299 647 1204 1607 933 1536 1,4-alpha-glucan-maltohydrolase AT5G18670 Solyc01g067680.3 774 305 694 563 302 322 358 237 341 491 950 425 304 550 1260 Tubby-like F-box protein (AHRD V3.3 *** A0A2G3DFX8_CAPCH) Solyc01g067690.4 29 104 294 268 270 265 246 193 146 134 220 180 111 155 268 Unknown protein Solyc01g067700.3 62 146 189 240 284 258 291 261 224 204 170 255 131 170 160 SCA7, zinc-binding domain protein (AHRD V3.3 *-* X8JJA6_9HOMO) Solyc01g067710.3 1663 1583 1254 1511 1416 1255 1280 1244 1503 1928 2513 1326 2327 1715 1488 (Sodium/potassium)/proton exchanger 3 Solyc01g067720.4 323 244 200 211 200 132 125 147 199 215 186 124 192 265 209 Vesicle-associated protein 1-1 (AHRD V3.3 *** A0A2G3DFU6_CAPCH) AT1G08820 Solyc01g067730.3 1250 3203 2427 3500 3647 2807 2998 3378 2151 2288 1888 2679 3723 3105 2236 Acyl carrier protein (AHRD V3.3 *** A0A1U8EET6_CAPAN) AT5G27200 Solyc01g067740.3 4643 3338 3788 3451 1791 2504 2008 1336 4026 4559 3389 4450 8568 6266 3507 Superoxide dismutase [Cu-Zn] 1 AT1G08830 Solyc01g067750.3 701 1380 1039 1197 1787 1685 1658 1762 1173 989 900 1227 1093 1127 969 dehydroquinate dehydratase/shikimate:NADP oxidoreductase AT3G06350 Solyc01g067755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) ATMG00810 Solyc01g067760.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Photosystem I reaction center subunit IX (AHRD V3.3 *** M1FKX6_SALMI) Solyc01g067780.1 1 8 0 0 12 4 1 7 3 3 4 4 0 3 1 DnaJ domain (AHRD V3.3 *** A0A200QQ07_9MAGN) AT5G18750 Solyc01g067790.3 524 929 703 918 985 1148 1094 975 736 643 671 865 587 950 423 BRCT domain-containing DNA repair protein (AHRD V3.3 *-* A0A1P8B7K8_ARATH) AT3G21480 Solyc01g067800.3 1172 1080 1335 1091 1685 1411 1466 1513 1377 1545 1510 1341 1215 1279 1277 Zinc finger protein (AHRD V3.3 *** A0A2K3PE50_TRIPR) AT3G06330 Solyc01g067820.3 99 129 174 142 142 192 203 129 148 135 216 125 125 125 193 DNA mismatch repair protein (AHRD V3.3 *** AT3G62450.1) AT3G62450 Solyc01g067830.3 855 646 615 810 786 762 757 745 524 733 497 782 729 751 467 U1 small nuclear ribonucleoprotein C (AHRD V3.3 *** A0A2G3ALC7_CAPAN) Solyc01g067840.2 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc01g067850.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4AX33_SOLLC) Solyc01g067860.3 0 0 0 0 0 0 0 0 0 0 1 0 1 0 3 Peroxidase (AHRD V3.3 *** K4AX34_SOLLC) Solyc01g067870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4AX35_SOLLC) AT2G39040 Solyc01g067880.3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4AX36_SOLLC) Solyc01g067890.4 2813 2736 2302 2813 3939 3750 4208 3992 3369 3676 2764 2958 2424 2352 3166 1-D-deoxyxylulose 5-phosphate synthase AT4G15560 Solyc01g067895.1 21 32 17 16 19 10 22 14 14 22 19 18 26 23 29 Unknown protein Solyc01g067900.3 1310 2454 2215 2348 2418 2186 2260 2152 2294 2460 2085 2262 2690 1643 1576 Rapid alkalinization factor 23 (AHRD V3.3 *** A0A2G3DFY2_CAPCH) Solyc01g067910.3 18 58 43 61 95 52 67 59 22 26 29 56 46 49 49 Unknown protein Solyc01g067920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc01g067930.4 374 480 471 365 401 362 388 426 616 609 620 419 407 306 434 Xyloglucan 6-xylosyltransferase 1 (AHRD V3.3 *** A0A1J3JYE5_NOCCA) AT4G02500 Solyc01g067940.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g067950.1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 Unknown protein Solyc01g067960.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Transcription factor GTE12 (AHRD V3.3 --* W9QY23_9ROSA) Solyc01g067965.1 4 1 6 5 0 0 0 0 3 5 7 0 0 2 13 Methyl-CpG-binding domain-containing protein 2 (AHRD V3.3 *-* A0A1U8GNC1_CAPAN) Solyc01g067980.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase-2C (AHRD V3.3 *-* O82469_MESCR) Solyc01g067990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA damage-binding protein 2 (AHRD V3.3 *-* A0A1J3IRF0_NOCCA) Solyc01g068000.4 417 242 506 311 160 218 221 180 329 385 390 266 261 292 385 Protein phosphatase-2C (AHRD V3.3 *** O82469_MESCR) AT3G62260 Solyc01g068010.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g068020.4 359 347 511 531 442 558 590 473 483 434 764 541 443 448 461 Polyketide cyclase / dehydrase and lipid transport protein (AHRD V3.3 *** Q1G3L2_ARATH) AT1G02475 Solyc01g068030.3 362 339 473 628 472 484 569 515 639 642 604 723 364 432 505 Polyketide cyclase / dehydrase and lipid transport protein (AHRD V3.3 *** Q1G3L2_ARATH) AT1G02475 Solyc01g068040.1 14 5 0 43 2 2 3 2 3 6 0 9 3 4 0 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I0WSX7_9ASPA) Solyc01g068045.1 1358 3795 3136 2930 3499 4021 3771 3711 2116 1825 2659 2613 4197 3388 2983 Ubiquitin (AHRD V3.3 *** B1P770_LOLTE) AT2G47110 Solyc01g068050.3 401 422 491 418 392 398 441 358 331 322 427 338 504 454 460 tRNA:m(4)X modification enzyme TRM13 homolog (AHRD V3.3 *** A0A2I4DJN8_9ROSI) AT4G01880 Solyc01g068060.4 176 130 177 161 125 150 191 137 225 174 202 173 163 157 208 Autophagy-related protein (AHRD V3.3 *** F2YHL2_SOLLC) AT3G15580 Solyc01g068070.4 736 727 403 642 473 563 636 456 463 413 424 445 626 782 572 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *-* AT4G01860.2) Solyc01g068075.1 1 4 6 26 16 17 45 25 3 1 16 2 2 6 24 Unknown protein Solyc01g068080.4 67 71 131 102 163 131 103 148 97 75 154 96 56 66 39 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PJA8_ARTAN) AT1G68540 Solyc01g068100.4 5662 4095 4397 3657 2781 2985 3156 3160 5035 4791 4347 3105 4324 3797 3744 Squamosa promoter binding protein12a Solyc01g068110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc01g068120.4 0 21 74 3 0 0 1 12 0 1 0 0 0 3 0 Pectinesterase (AHRD V3.3 *-* A0A2G3AK10_CAPAN) Solyc01g068130.4 143 718 878 560 636 530 543 707 492 359 577 445 379 546 401 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2) Solyc01g068140.4 1 20 5 18 25 32 21 29 27 37 39 12 12 10 24 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1PGW7_ARTAN) AT3G62160 Solyc01g068150.3 689 669 770 488 532 633 572 540 428 467 599 487 786 702 388 NEFA-interacting nuclear protein (AHRD V3.3 *** Q5XV94_ARATH) AT3G62140 Solyc01g068160.4 1277 1237 1129 1094 1144 1190 1194 1200 1107 1225 872 1062 1259 1204 981 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (AHRD V3.3 *** A0A2U1MVH0_ARTAN) AT3G62130 Solyc01g068170.3 301 263 272 235 207 231 173 179 241 243 193 208 253 278 280 FK506-binding-like protein (AHRD V3.3 *-* Q93XY4_ARATH) AT3G51940 Solyc01g068180.3 398 286 253 256 270 264 264 281 259 227 265 243 250 312 230 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XRW7_CAPBA) AT4G20740 Solyc01g068190.3 141 217 359 157 215 176 142 140 168 170 160 170 242 237 153 high chlorophyll fluorescence 153 (AHRD V3.3 *** AT4G31560.1) AT4G31560 Solyc01g068200.4 589 787 893 966 800 1003 950 920 873 729 840 879 1025 917 949 Glycosyltransferase-like KOBITO 1 (AHRD V3.3 *** A0A2G2XRW4_CAPBA) AT3G08550 Solyc01g068210.3 1069 957 980 894 953 1008 963 1055 1093 1071 999 1071 907 1005 885 Glutamate dehydrogenase (AHRD V3.3 *** A0A2I4GHF6_9ROSI) AT1G51720 Solyc01g068240.3 730 1491 964 1051 972 1044 1128 973 976 659 650 860 1660 1642 1170 Ubiquitin carboxyl-terminal hydrolase 24 (AHRD V3.3 *** A0A2G3DH37_CAPCH) Solyc01g068250.2 21 184 45 138 305 261 248 327 114 80 69 93 21 67 86 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1NST7_ARTAN) AT3G51930 Solyc01g068260.4 375 525 736 722 818 950 1029 819 625 435 694 772 359 761 503 DNA topoisomerase 2-binding protein 1 (AHRD V3.3 *** A0A1J3J5G7_NOCCA) AT1G77320 Solyc01g068270.3 753 981 1015 1606 1058 1270 1286 1195 1534 1701 1237 1320 1334 1257 1270 Protein kinase family protein (AHRD V3.3 *** S8DW53_9LAMI) Solyc01g068280.3 429 1313 1185 1438 2555 2355 2280 2992 1793 1099 1381 1896 646 1097 720 Protein CHROMATIN REMODELING 24 (AHRD V3.3 *** A0A2G3DH52_CAPCH) AT5G63950 Solyc01g068290.4 646 552 495 494 397 414 475 438 401 474 484 391 434 503 642 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (AHRD V3.3 *** A0A2G3AKP6_CAPAN),Pfam:PF01134 AT2G13440 Solyc01g068293.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT1G05490 Solyc01g068297.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT1G05490 Solyc01g068300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) Solyc01g068305.1 1 0 0 1 0 1 2 0 0 0 0 0 0 0 0 Unknown protein Solyc01g068320.3 0 24 13 30 13 5 4 12 1 16 5 10 7 17 1 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT1G05490 Solyc01g068330.4 1353 1068 732 696 624 696 718 752 682 678 572 673 811 972 666 Cell division control protein 48-like protein C (AHRD V3.3 *** A0A2G3DH55_CAPCH) AT3G01610 Solyc01g068340.3 58 105 95 106 83 149 143 148 129 97 52 110 73 104 37 Crossover junction endonuclease MUS81 (AHRD V3.3 *** A0A2G3AKQ4_CAPAN) AT4G30870 Solyc01g068350.3 61 121 182 159 178 237 291 148 98 87 143 132 98 125 191 Crossover junction endonuclease MUS81 (AHRD V3.3 *-* A0A2G3AKQ4_CAPAN) Solyc01g068360.4 444 497 480 557 428 459 528 470 336 469 530 336 412 497 454 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *-* A0A2U1Q3K2_ARTAN) Solyc01g068370.4 166 153 109 146 147 156 168 123 128 174 93 113 94 104 137 histone-lysine N-methyltransferase SUVR3 (AHRD V3.3 *** A0A2I4DIZ4_9ROSI) AT3G03750 Solyc01g068380.3 31 13 22 38 23 15 9 7 25 14 16 28 28 28 36 Purple acid phosphatase (AHRD V3.3 *** A0A2G2XQL8_CAPBA) Solyc01g068390.3 1439 1335 1157 1151 1308 1282 1261 1281 1235 1399 1180 1108 1116 1200 1242 Zinc ion binding/nucleic acid binding protein (AHRD V3.3 *-* F4IK69_ARATH) AT3G62240 Solyc01g068400.3 750 839 885 697 891 866 889 884 723 645 915 635 926 728 1155 Tubulin-specific chaperone A (AHRD V3.3 *** A0A2G2XQI4_CAPBA) AT2G30410 Solyc01g068410.4 36 198 84 103 381 430 420 421 157 94 61 102 65 66 23 SlPIN5 AT5G16530 Solyc01g068420.4 0 0 0 0 0 1 1 3 0 1 0 1 0 0 0 Protein trichome birefringence-like 38 (AHRD V3.3 *** A0A2G3DHL2_CAPCH) Solyc01g068430.3 0 1 4 0 0 0 0 0 2 0 0 0 0 0 0 Protein trichome birefringence-like 37 (AHRD V3.3 *** A0A2G3AKU4_CAPAN) Solyc01g068435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g068440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 38 (AHRD V3.3 *** A0A2G3DHL2_CAPCH) Solyc01g068450.4 233 202 166 151 141 133 131 118 129 163 150 136 252 162 221 Essential protein Yae1, N-terminal (AHRD V3.3 *** A0A2U1P191_ARTAN) AT1G34570 Solyc01g068460.4 2013 1719 1988 2059 2804 2827 3080 3256 2969 2118 1989 1920 1835 2123 3082 Plant calmodulin-binding-like protein (AHRD V3.3 *** G7IW85_MEDTR) AT2G38800 Solyc01g068470.4 215 126 100 153 199 170 175 200 174 146 125 163 135 124 231 cytochrome C oxidase subunit (AHRD V3.3 *** AT2G38780.4) AT2G38780 Solyc01g068480.4 2747 2523 1818 1985 2056 2022 2232 2344 2207 2338 1772 2116 1893 2291 2535 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1P5L6_ARTAN) AT2G38770 Solyc01g068490.4 276 195 182 129 66 52 66 39 97 159 189 54 278 137 119 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A200RD53_9MAGN) Solyc01g068500.4 71 75 88 94 72 52 60 51 73 79 111 48 61 90 78 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *** A0A2K3NJK3_TRIPR) AT3G54510 Solyc01g068510.1 6 1 8 7 11 9 11 3 3 2 1 6 2 6 9 protein PELPK1-like (AHRD V3.3 *** XP_025884731.1) Solyc01g068520.1 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc01g068530.3 1913 3271 3472 2465 3020 3316 2956 3189 2348 1966 2355 2398 3997 3352 3106 40S ribosomal protein S16 (AHRD V3.3 *** A0A2G3DIR8_CAPCH) AT2G09990 Solyc01g068540.3 148 357 345 250 403 424 361 449 328 231 344 476 249 399 164 Homeodomain-like superfamily protein (AHRD V3.3 *-* AT3G53440.2) AT3G53440 Solyc01g068550.2 0 9 29 17 11 15 12 23 55 15 14 30 11 16 0 O-methyltransferase (AHRD V3.3 *** A0A1B4Z3W3_9ROSA) Solyc01g068560.3 1074 1147 320 954 1915 2145 1681 1543 959 1280 357 941 834 310 309 protein LNK2 isoform X1 (AHRD V3.3 --* XP_023879322.1) Solyc01g068580.4 908 993 966 1107 1164 1335 1393 1134 782 718 1099 820 1283 1054 1059 Hepatocellular carcinoma-associated antigen 59 (AHRD V3.3 *-* A0A200R1K4_9MAGN) AT1G02330 Solyc01g068590.4 1082 974 917 797 698 701 790 843 1206 1231 1064 739 914 844 1043 Metal ion-binding protein (AHRD V3.3 *** F4IX22_ARATH) AT3G62010 Solyc01g068620.4 232 375 491 385 399 485 449 471 409 308 488 382 364 371 343 Polyketide cyclase / dehydrase and lipid transport protein (AHRD V3.3 *** Q9M120_ARATH) AT4G01650 Solyc01g068630.3 4 7 28 20 0 0 0 0 4 4 0 0 6 1 83 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1PYM0_ARTAN),Pfam:PF13419 AT3G62040 Solyc01g068640.3 252 271 278 272 263 326 289 289 364 201 176 161 307 340 265 AarF domain-containing protein kinase 4 (AHRD V3.3 *** A0A2G2XSA9_CAPBA) AT4G01660 Solyc01g079060.4 68 60 54 35 49 63 54 71 64 54 24 56 41 40 38 charged multivesicular body protein 7 (AHRD V3.3 *** A0A2I4FMT0_9ROSI) Solyc01g079080.3 9 136 198 112 222 205 182 197 190 115 152 182 122 182 37 asynaptic protein (AHRD V3.3 *-* AT2G46980.2) AT2G46980 Solyc01g079090.4 2784 2132 2026 1890 2091 1951 2189 2054 1999 2141 1711 2018 1375 1732 2177 Protoporphyrinogen oxidase (AHRD V3.3 *** O64384_SOLTU) AT4G01690 Solyc01g079100.3 56 443 318 578 931 930 1010 838 454 233 582 590 79 251 320 S-acyltransferase (AHRD V3.3 *** A0A2G2XQX7_CAPBA) AT4G01730 Solyc01g079110.4 113 2069 2565 1906 3124 2925 2962 3156 1723 1130 1553 2773 766 2000 529 Histone H3 (AHRD V3.3 *** A0A2G3DHD8_CAPCH) AT1G09200 Solyc01g079115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g079120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g079130.2 4 34 90 227 27 16 7 14 7 23 8 20 23 16 10 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LK87_ARTAN) AT1G02460 Solyc01g079140.2 430 204 296 134 2 3 7 8 95 146 336 13 1079 338 142 Unknown protein Solyc01g079150.4 968 1761 329 2644 667 356 302 413 1002 840 289 360 1965 256 401 HCO3-transporter family (AHRD V3.3 *** A0A2U1KUW6_ARTAN) AT3G62270 Solyc01g079155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3N4Z1_TRIPR) ATMG00240 Solyc01g079160.4 0 1 4 21 20 7 12 7 2 2 1 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3AJV6_CAPAN) Solyc01g079170.3 152 135 26 171 229 191 156 254 203 78 77 137 39 61 145 Hexosyltransferase (AHRD V3.3 *** A0A2G3DHC3_CAPCH) AT2G47180 Solyc01g079180.4 2 63 71 11 75 45 61 63 25 4 24 43 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G2XQP7_CAPBA) Solyc01g079190.2 0 2 0 0 0 0 1 0 1 2 0 0 0 0 0 Unknown protein Solyc01g079200.4 192 80 464 180 21 16 9 10 73 255 294 76 70 72 117 gibberellin 2-oxidase 3 AT1G02400 Solyc01g079210.3 922 793 1098 978 950 954 1017 938 929 908 891 987 941 1073 1078 SWR1-complex protein 4 (AHRD V3.3 *** A0A2G3AKV1_CAPAN) AT2G47210 Solyc01g079220.4 277 298 327 380 274 254 317 315 323 358 382 323 353 355 337 NifU-like protein 1, chloroplastic (AHRD V3.3 *** A0A1U8E004_CAPAN) Solyc01g079230.4 8593 5641 4398 4035 3854 3996 3949 4052 4659 4772 4049 4650 4272 5420 4750 Duf724 domain-containing protein 3 (AHRD V3.3 *** A0A1J6JCE9_NICAT) Solyc01g079240.3 843 1403 1917 1595 1116 1228 949 1264 2052 1400 1331 2054 1120 1656 644 Long chain acyl-CoA synthetase 1 (AHRD V3.3 *** A0A2G3AKT2_CAPAN) AT2G47240 Solyc01g079250.3 14888 9646 6188 6970 6260 6546 6477 6409 5898 6874 5448 5461 7277 7635 6078 RNA helicase DEAH-box2 AT3G62310 Solyc01g079260.4 967 668 714 603 257 301 224 294 814 936 1528 587 446 706 716 WRKY transcription factor 23 AT2G47260 Solyc01g079270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor UPBEAT1 (AHRD V3.3 *** XP_022860772.1) AT2G47270 Solyc01g079280.1 1 2 0 1 0 9 1 0 1 3 0 0 0 2 0 Unknown protein Solyc01g079285.1 3 5 8 3 0 1 0 1 3 2 1 1 8 5 0 Unknown protein Solyc01g079290.1 0 8 8 12 8 7 21 5 7 1 8 9 0 1 7 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200R0D5_9MAGN) Solyc01g079300.4 72 22 68 34 0 3 0 3 32 13 22 12 19 126 155 Stachyose synthase (AHRD V3.3 *** S8CRI9_9LAMI) AT4G01970 Solyc01g079310.3 397 429 442 502 300 354 398 316 407 363 358 455 430 580 409 Heme binding protein (AHRD V3.3 *** Q9LZQ3_ARATH) Solyc01g079320.4 159 174 172 158 132 127 152 163 143 116 140 195 238 205 131 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PWD1_9MAGN) AT1G02370 Solyc01g079330.3 1057 932 698 693 934 881 776 926 808 787 676 823 876 883 713 RNA helicase DEAD3 AT2G47330 Solyc01g079340.3 2260 2625 2413 2772 2811 2870 2821 2954 2516 2730 2381 2700 2479 2738 2504 Serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2XQS7_CAPBA) AT4G02010 Solyc01g079350.3 3450 1908 1891 1598 1301 1504 1342 1179 1753 1861 2013 1763 1285 1579 2167 HIT zinc finger and PAPA-1-like domain-containing protein (AHRD V3.3 *-* F4I548_ARATH) AT2G47350 Solyc01g079360.4 695 365 493 389 195 156 153 130 701 784 826 754 556 617 657 WRKY transcription factor 37 Solyc01g079370.4 4 8 1 15 11 12 4 3 4 14 15 2 2 12 4 Transcription factor GRAS (AHRD V3.3 *** A0A200PWC4_9MAGN) Solyc01g079380.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Transcription factor GRAS (AHRD V3.3 *** A0A200PWC4_9MAGN) Solyc01g079390.4 1654 951 947 1040 688 826 925 738 1031 1181 1003 889 755 987 1283 EZ1 AT4G02020 Solyc01g079400.3 402 409 412 418 709 668 698 635 409 366 487 448 441 413 405 Protein trichome birefringence-like 6 (AHRD V3.3 *** A0A2G3AKU6_CAPAN) AT3G62390 Solyc01g079410.3 154 876 549 830 1126 994 983 1170 1104 1094 1058 1400 1082 1117 580 Calcium-dependent phosphotriesterase superfamily protein (AHRD V3.3 *** A0A2U1MTE8_ARTAN) AT2G16760 Solyc01g079420.4 657 994 1440 1312 1258 1412 1418 1046 787 796 1473 826 1105 1012 1485 Cytochrome c oxidase subunit 5C (AHRD V3.3 *** A0A2G3AK13_CAPAN) Solyc01g079430.2 154 164 129 98 194 166 158 158 175 152 90 163 187 188 110 Plant organelle RNA recognition domain (AHRD V3.3 *** A0A200QLU5_9MAGN) AT5G21970 Solyc01g079440.1 0 0 5 4 8 7 3 4 0 1 1 1 2 0 1 Unknown protein Solyc01g079450.3 2945 2714 2430 2734 2390 2314 2487 2803 3712 3626 2479 2933 2507 2990 2987 Peptidase S9 (AHRD V3.3 *** A0A200R223_9MAGN) AT2G47390 Solyc01g079460.2 17 8 65 24 16 13 11 17 20 14 65 26 2 7 28 hypothetical protein (AHRD V3.3 *** AT1G56423.2) Solyc01g079470.4 193 293 883 813 59 58 60 70 1255 209 807 444 494 1084 1749 Unknown protein Solyc01g079480.3 1357 973 2174 1225 1103 1492 1654 1172 1014 867 3420 1065 888 1021 1197 BZIP transcription factor (AHRD V3.3 *** C0LQL1_9CARY) AT3G62420 Solyc01g079490.2 267 528 665 707 845 942 997 794 595 568 642 706 557 700 582 Vacuolar protein sorting-associated protein 51-like protein (AHRD V3.3 *** A0A2S1CEW9_PRUYE) AT4G02030 Solyc01g079500.4 299 2374 2320 1935 3214 3108 3250 3232 2633 1469 1469 2680 1755 2856 897 DNA replication licensing factor MCM7 (AHRD V3.3 *** A0A1U8FE76_CAPAN) AT4G02060 Solyc01g079510.3 2498 1897 2095 1988 1465 1975 2271 1697 1987 1753 1729 1747 1540 2265 2521 WD40 domain-containing protein (AHRD V3.3 *** A0A178W3E8_ARATH) AT5G49430 Solyc01g079520.3 746 1133 1614 1079 1663 1908 1899 1636 1170 871 1115 1434 782 1456 718 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200R263_9MAGN) AT4G02070 Solyc01g079530.4 292 69 111 78 77 122 89 81 63 196 171 68 11 64 135 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1LZL6_ARTAN) AT1G02610 Solyc01g079535.1 1706 2476 2187 2103 2333 2196 2246 2221 2864 2854 2980 2813 3173 2260 2429 GTP-binding protein (AHRD V3.3 *** Q9SDK4_ORYSJ) AT4G02080 Solyc01g079550.2 35 19 51 41 27 46 42 25 32 58 31 27 43 15 8 Multidrug resistance protein ABC transporter family protein, putative (AHRD V3.3 *** A0A061DZ20_THECC) AT4G02090 Solyc01g079560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3CJU4_CEPFO) Solyc01g079570.3 7 457 179 109 780 600 608 727 134 139 104 71 93 106 85 Beta-D-xylosidase 1 (AHRD V3.3 *** A0A1U8DZL0_CAPAN) AT1G02640 Solyc01g079580.3 2376 1322 1796 1283 2584 2965 2723 2367 1152 2015 1964 1759 690 1022 603 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1LZR6_ARTAN) AT2G47440 Solyc01g079590.3 2522 1556 1683 2001 1582 1727 1698 1458 1736 2193 2129 2014 1532 1315 1621 Late embryogenesis abundant protein (LEA) family protein (AHRD V3.3 *** F4IYB7_ARATH) AT3G62580 Solyc01g079600.4 1397 514 1673 624 516 645 662 557 562 1349 2036 793 497 685 903 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1L2I9_ARTAN) AT1G02660 Solyc01g079610.3 354 890 712 508 877 851 812 875 656 483 636 647 1641 1228 746 DnaJ protein ERDJ3B (AHRD V3.3 *** A0A2G2Z6I0_CAPAN) AT3G62600 Solyc01g079615.1 81 18 22 6 0 0 1 0 11 28 30 4 11 30 60 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc01g079620.4 941 356 267 261 92 53 113 38 355 523 892 397 153 269 554 colorless fruit epidermis AT2G47460 Solyc01g079630.3 579 438 587 486 516 549 560 382 398 483 815 450 367 442 636 sucrose-phosphatase-like protein (AHRD V3.3 *-* AT3G62620.8) AT3G62620 Solyc01g079640.4 994 614 790 923 675 832 887 654 496 924 974 696 532 643 798 pollen-specific LRR extensin-like protein (AHRD V3.3 *** AT2G25920.1) AT2G25920 Solyc01g079650.3 1880 1411 1125 1382 1298 1504 1331 1214 875 1143 1140 1168 1243 1408 1931 CTP synthase (AHRD V3.3 *** A0A2G3AL34_CAPAN) AT4G02120 Solyc01g079660.2 95 81 648 14 3 9 4 8 26 49 604 47 71 29 275 Cotton fiber protein (AHRD V3.3 *** Q570M0_ARATH) AT5G38700 Solyc01g079670.2 2 1 21 6 0 0 0 0 0 1 4 0 0 1 7 Cotton fiber protein (AHRD V3.3 *** Q570M0_ARATH) AT5G38700 Solyc01g079680.3 1658 2340 1903 1682 2422 2317 2388 2822 2136 1693 1569 2142 2450 2590 1529 RAN GTPase-activating protein 1 (AHRD V3.3 *** A0A1U8DZ62_CAPAN) AT5G19320 Solyc01g079690.4 999 689 646 664 560 590 614 688 760 720 468 760 617 753 634 Snf2 chromatin remodeling protein (AHRD V3.3 *-* A0A1T3CE02_9HYPO) AT3G06010 Solyc01g079700.3 72 60 80 40 26 44 47 82 83 64 47 82 40 64 18 Helicase, C-terminal (AHRD V3.3 *-* A0A2U1NPJ2_ARTAN) Solyc01g079710.3 3404 2263 2037 1686 1146 1249 1327 1126 1270 1528 1794 1528 1788 1956 1959 Deoxyribose-phosphate aldolase (AHRD V3.3 *** A0A166YQY4_9PEZI) AT5G19300 Solyc01g079720.3 678 483 475 546 382 437 468 400 511 526 471 475 525 522 593 Protein phosphatase 2C 70 (AHRD V3.3 *** A0A1U8E8U4_CAPAN) AT5G19280 Solyc01g079750.3 531 1237 1147 1404 1656 1825 1818 2091 1148 1006 912 1437 549 867 702 MAP kinase kinase kinase 4 AT3G06030 Solyc01g079760.3 805 845 703 658 797 755 856 707 733 699 726 790 818 680 803 Peroxisomal adenine nucleotide carrier 1 (AHRD V3.3 *** A0A1U8DZM1_CAPAN) AT5G27520 Solyc01g079770.2 82 138 183 181 252 267 162 342 214 204 131 268 133 151 88 TLC domain-containing protein 2 (AHRD V3.3 *** A0A2I4HJX7_9ROSI) AT1G21790 Solyc01g079780.3 507 964 760 945 910 772 769 873 985 1196 935 915 1141 906 671 Glycoprotein membrane GPI-anchored (AHRD V3.3 *** Q9ZVL0_ARATH) AT5G19250 Solyc01g079790.4 208 674 598 426 761 751 828 866 767 585 411 609 404 438 399 ADP-glucose pyrophosphorylase large subunit 3 AT5G19220 Solyc01g079800.4 149 156 91 107 96 98 87 85 107 79 99 77 164 124 103 DEAD-box ATP-dependent RNA helicase 58, chloroplastic (AHRD V3.3 *** A0A2G3AL49_CAPAN) AT5G19210 Solyc01g079805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc01g079810.4 1272 1050 1591 1486 1113 1103 1107 1155 1212 1746 1195 1213 1559 1381 1387 E3 ubiquitin-protein ligase RHF1A (AHRD V3.3 *** A0A1J3FVF9_NOCCA) AT4G14220 Solyc01g079820.3 2215 2789 3153 2590 2740 2585 2495 2700 2582 2532 2512 2849 2873 2663 2907 Peroxiredoxin (AHRD V3.3 *** H6VUU5_9FABA) AT3G06050 Solyc01g079830.3 5 266 148 33 1896 2383 2590 1356 144 178 160 71 34 55 40 hypothetical protein (AHRD V3.3 *** AT5G19190.1) AT5G19190 Solyc01g079840.3 814 1084 1008 1042 921 1005 997 979 933 825 741 770 1142 1157 807 NEDD8-activating enzyme E1 catalytic subunit (AHRD V3.3 *** A0A1U8EA19_CAPAN) AT5G19180 Solyc01g079850.3 51 108 207 148 161 177 158 113 165 95 204 104 98 154 167 Protein trichome birefringence-like 11 (AHRD V3.3 *** A0A2G3DI26_CAPCH) AT5G19160 Solyc01g079855.1 5 0 0 4 0 0 1 1 1 0 0 0 3 0 0 Unknown protein Solyc01g079860.3 434 367 373 444 358 313 333 350 429 364 395 377 591 492 475 ATP-dependent (S)-NAD(P)H-hydrate dehydratase (AHRD V3.3 *** A0A1U8EBN0_CAPAN) AT5G19150 Solyc01g079870.4 8226 4167 2896 2729 2274 2202 2107 2327 2959 3794 2694 2645 4516 4267 4420 CONSTANS interacting protein 2b AT1G08970 Solyc01g079880.3 13084 4816 2940 3985 3300 2990 2885 3363 3283 6433 2172 2710 4168 3082 3691 Aluminum induced protein with YGL and LRDR motifs (AHRD V3.3 *** Q94BR2_ARATH) AT5G19140 Solyc01g079890.3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 NOD26-like intrinsic protein 7.1 AT3G06100 Solyc01g079900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc01g079910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan specific endoglucanase inhibitor (AHRD V3.3 *-* F6MHJ7_SOLTU) Solyc01g079920.3 0 0 0 0 1 0 0 0 0 3 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1M5P2_ARTAN) Solyc01g079930.3 0 1 1 4 0 0 4 2 8 2 6 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1KXX4_ARTAN) Solyc01g079940.4 53 93 138 46 46 28 23 45 64 94 62 62 43 23 42 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1KXX4_ARTAN) Solyc01g079950.3 36 172 335 224 188 241 188 318 158 127 353 125 141 176 332 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc01g079960.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc01g079970.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1KE41_ARTAN) Solyc01g079980.3 19 91 105 138 225 255 203 181 77 76 46 114 23 50 35 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc01g079990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc01g080000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc01g080010.2 27 35 118 47 33 17 31 25 70 225 64 31 85 21 190 xyloglucan endoglucanase inhibitor AT1G03220 Solyc01g080020.2 1545 572 520 255 532 487 594 493 431 1571 730 784 254 366 515 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc01g080030.3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2-alkenal reductase (NADP(+)-dependent) (AHRD V3.3 *** A0A2G3BME1_CAPCH) Solyc01g080040.3 147 99 172 217 137 196 192 119 154 119 252 139 129 165 181 Dual specificity protein phosphatase 1 (AHRD V3.3 *** A0A2G3DHV6_CAPCH) AT3G23610 Solyc01g080050.4 4 28 26 14 19 24 25 16 58 10 45 26 5 5 5 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1LW68_ARTAN) AT3G06120 Solyc01g080055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc01g080070.4 1463 4131 4140 4521 4052 4765 5322 4004 5475 2743 4682 4295 4136 4471 4014 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6PK24_ACTCH) AT3G06130 Solyc01g080075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc01g080080.3 1807 1084 1040 1237 1216 1117 1327 1082 833 1365 1045 1053 867 864 1099 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1KJJ9_ARTAN) Solyc01g080100.3 17 18 59 39 52 42 44 22 47 23 50 40 34 49 36 RING zinc finger protein (AHRD V3.3 *** AT3G06145.1) AT3G06145 Solyc01g080110.3 333 461 520 532 424 523 509 472 486 449 355 407 455 415 386 SNARE associated Golgi protein family (AHRD V3.3 *** B6U042_MAIZE) AT5G19070 Solyc01g080120.2 1 8 19 6 29 16 13 13 9 2 16 5 0 9 2 Cytochrome P450 family protein (AHRD V3.3 *** Q9M8K3_ARATH) AT3G06150 Solyc01g080130.2 627 681 813 917 648 840 816 683 959 880 956 696 662 707 1082 Cytochrome P450 family protein (AHRD V3.3 *** Q9M8K3_ARATH) AT3G06150 Solyc01g080140.3 422 706 667 647 788 673 837 813 633 548 548 678 757 806 640 UPF0613 protein PB24D3.06c (AHRD V3.3 *** A0A1J3GSX0_NOCCA) AT5G19050 Solyc01g080150.3 565 377 627 999 222 165 157 101 207 440 601 115 417 530 1584 Adenylate isopentenyltransferase (AHRD V3.3 *** B3XZI4_IPONI) AT5G19040 Solyc01g080160.4 355 334 322 264 341 284 302 389 323 302 235 304 311 307 232 DUF21 domain-containing protein (AHRD V3.3 *** A0A2G2Y4P4_CAPAN) AT4G14240 Solyc01g080170.3 606 417 469 432 288 312 344 311 509 503 583 425 487 456 543 Hydroxymethylglutaryl-CoA lyase, mitochondrial (AHRD V3.3 *** A0A1U8E166_CAPAN) Solyc01g080180.3 121 128 81 211 167 131 138 113 104 262 155 125 94 119 119 Ribosomal protein L34e superfamily protein (AHRD V3.3 *-* A0A1P8BBG9_ARATH) AT3G06180 Solyc01g080190.3 104 163 177 170 169 201 161 159 156 111 158 160 212 185 216 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A1U8E0X5_CAPAN) AT5G19020 Solyc01g080200.3 1835 1033 784 825 1053 1187 1179 1013 855 1130 981 897 680 935 1286 mediator of RNA polymerase II transcription subunit 33A-like (AHRD V3.3 *** A0A2I4F330_9ROSI) AT3G23590 Solyc01g080210.3 86 109 73 43 41 37 66 47 76 45 55 51 117 100 47 Ribonucleoside-diphosphate reductase small chain (AHRD V3.3 *** A0A1U8FR86_CAPAN) AT3G23580 Solyc01g080220.3 370 333 203 293 37 63 62 33 121 232 174 111 850 382 534 endo-1,31,4-beta-D-glucanase-like (AHRD V3.3 *** A0A2I4F2Y3_9ROSI) Solyc01g080230.3 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 endo-1,31,4-beta-D-glucanase-like (AHRD V3.3 *** A0A2I4F2Y3_9ROSI) Solyc01g080240.4 2033 2384 2977 2850 2698 3309 3196 2900 3077 2301 2691 2462 2263 2583 3053 mitogen-activated protein kinase 13 AT5G19010 Solyc01g080250.3 1803 1838 1569 1659 2058 1611 1588 2115 1775 2326 1178 1750 1964 1815 1238 BTB/POZ and MATH domain-containing protein 2-like (AHRD V3.3 *** A0A1S3ZJG5_TOBAC) AT3G06190 Solyc01g080260.3 13 5 16 15 30 26 44 16 9 10 35 10 9 15 15 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1LFG7_ARTAN) AT5G18980 Solyc01g080270.3 1463 979 976 880 767 673 742 657 785 754 852 714 945 865 948 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1N7S1_ARTAN) AT4G14290 Solyc01g080280.3 2608 4392 2669 2983 3793 3303 2873 4530 5043 4729 2642 3081 3937 2388 2703 chloroplast glutamine synthetase AT5G35630 Solyc01g080290.3 78 113 276 207 99 117 133 97 82 129 152 106 80 105 149 AWPM-19-like family protein (AHRD V3.3 *** Q8LG79_ARATH) AT5G18970 Solyc01g080300.4 335 426 327 513 534 480 592 460 408 418 282 455 349 436 329 Protein ABCI12, chloroplastic (AHRD V3.3 *** A0A1U8E1S5_CAPAN) AT3G21580 Solyc01g080310.4 397 351 260 328 296 326 333 310 346 271 270 237 364 346 350 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QWY3_9MAGN) AT5G18950 Solyc01g080320.3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g080330.4 2091 2039 2189 2203 1907 1941 2040 2009 2199 2405 2521 1919 2426 2064 2344 Bax inhibitor 1-related (AHRD V3.3 *-* A0A200RBK8_9MAGN) Solyc01g080340.3 413 371 264 296 256 233 247 285 358 387 412 322 428 269 337 BSD domain-containing protein (AHRD V3.3 *** A0A1Q3B6E5_CEPFO) Solyc01g080350.3 313 314 251 265 274 280 337 368 276 384 258 297 304 276 279 Mo25 family protein (AHRD V3.3 *** Q3E9D4_ARATH) AT5G18940 Solyc01g080360.3 797 505 390 369 426 363 373 425 529 481 405 420 336 428 482 AP-5 complex subunit mu (AHRD V3.3 *** A0A2G2XRL3_CAPBA) AT2G20790 Solyc01g080370.3 8 0 6 9 11 1 9 2 6 0 3 1 0 1 2 Unknown protein Solyc01g080380.4 1 45 19 36 22 28 33 40 49 5 14 33 18 45 36 S-adenosylmethionine decarboxylase proenzyme (AHRD V3.3 *** A0A2G2XRM2_CAPBA) AT5G18930 Solyc01g080400.3 303 226 394 314 327 316 294 295 295 281 321 353 284 365 403 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1LBE2_ARTAN) AT3G06270 Solyc01g080410.3 64 106 108 326 55 68 83 24 22 28 46 7 122 184 225 Peptide-methionine (R)-S-oxide reductase (AHRD V3.3 *** A0A1U8FLP0_CAPAN) AT4G04830 Solyc01g080420.1 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 Unknown protein Solyc01g080430.4 912 534 530 674 582 637 587 662 887 797 831 593 553 624 889 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8B7R8_ARATH) AT4G03000 Solyc01g080440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g080450.4 145 168 174 132 105 125 107 120 130 131 112 160 149 185 42 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q1U1_9MAGN) AT1G16830 Solyc01g080460.3 1585 1127 225 609 180 132 128 169 964 1118 304 506 643 410 476 Pyruvate, phosphate dikinase (AHRD V3.3 *** A0A0M8KRU1_NICAT) AT4G15530 Solyc01g080470.3 1570 719 677 594 419 539 550 394 524 777 766 538 542 611 798 tRNA/rRNA methyltransferase (AHRD V3.3 *** A0A200Q1Y8_9MAGN) AT4G15520 Solyc01g080480.4 13 8 3 6 3 8 3 4 14 3 2 10 3 15 29 DNAse I-like superfamily protein (AHRD V3.3 *** A0A2U1Q9H2_ARTAN) AT3G21530 Solyc01g080490.2 0 4 8 18 22 51 39 22 8 27 12 6 1 14 31 DUF679 domain-containing protein (AHRD V3.3 *** A0A1Q3B6H0_CEPFO) AT3G21550 Solyc01g080500.2 7424 4455 3884 2779 1296 1135 1003 1030 2266 3664 5351 2349 4254 3285 4261 Plant/F10N7-170 protein, putative (AHRD V3.3 *** G7IFN2_MEDTR) AT3G21570 Solyc01g080510.3 981 671 562 630 516 464 391 480 684 776 536 435 801 557 692 interactor of constitutive active ROPs protein (AHRD V3.3 *-* AT1G16520.1) AT4G15545 Solyc01g080520.3 3 0 1 0 0 4 1 0 0 0 0 0 0 0 0 Protein kinase family protein (AHRD V3.3 *** A0A2U1N2H6_ARTAN) AT5G18910 Solyc01g080530.3 516 617 541 593 648 590 635 551 539 520 645 570 876 757 690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1Q140_ARTAN) AT5G18900 Solyc01g080540.3 1041 634 880 867 789 850 802 605 553 795 848 594 543 473 1169 Histidine-containing phosphotransfer protein 1 (AHRD V3.3 *** A0A2G2VZ65_CAPBA) AT3G21510 Solyc01g080550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Inosine-uridine preferring nucleoside hydrolase family protein (AHRD V3.3 *** F4JZJ2_ARATH) Solyc01g080560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Inosine-uridine preferring nucleoside hydrolase family protein (AHRD V3.3 *** A0A2U1LEG5_ARTAN) Solyc01g080570.4 15 34 11 17 1 2 0 0 34 31 60 6 48 128 12 Inosine-uridine preferring nucleoside hydrolase family protein (AHRD V3.3 *** A0A2U1LEG5_ARTAN) AT5G18860 Solyc01g080580.4 571 541 424 787 958 896 886 755 616 701 454 358 940 736 905 Inosine-uridine preferring nucleoside hydrolase family protein (AHRD V3.3 *** A0A2U1LEG5_ARTAN) AT5G18860 Solyc01g080590.3 653 632 816 924 912 1122 1039 856 901 818 1120 1014 864 889 1000 Low-density receptor-like protein (AHRD V3.3 *** AT5G18850.1) AT5G18850 Solyc01g080600.4 54 1426 1132 1011 1616 1607 1719 1757 861 498 776 1286 375 1147 326 Histone H3 (AHRD V3.3 *-* A0A200Q2V7_9MAGN) AT1G09200 Solyc01g080610.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3ALG8_CAPAN) Solyc01g080620.3 1086 845 686 655 667 590 671 731 721 890 689 797 838 745 616 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2U1P225_ARTAN) AT4G15840 Solyc01g080630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g080640.3 3112 5750 3881 4342 4065 4080 4224 4193 9632 6762 6242 8250 5481 6690 5307 ABC transporter C family member 4 (AHRD V3.3 *** A0A2G3DI56_CAPCH) Solyc01g080660.3 928 629 818 616 656 624 650 542 509 699 811 650 572 682 858 serine/arginine-rich SC35-like splicing factor SCL28 (AHRD V3.3 *-* A0A2I4G9K3_9ROSI) AT5G18810 Solyc01g080670.3 4467 2150 3335 2892 1876 1809 1994 1891 2080 3341 2368 2140 1618 1992 2639 Squamosa promoter binding protein 7 AT5G18830 Solyc01g080680.3 0 1 2 5 2 3 3 0 3 0 1 0 0 0 0 Sugar facilitator protein 3 AT5G18840 Solyc01g080690.3 720 540 394 535 376 435 431 486 531 539 523 564 552 581 525 WD40 repeat (AHRD V3.3 *** A0A200QLR8_9MAGN) Solyc01g080700.4 234 367 419 500 519 713 668 510 502 341 537 535 292 423 650 Inosine-uridine preferring nucleoside hydrolase family protein (AHRD V3.3 *** A0A2U1NVI6_ARTAN) AT5G18860 Solyc01g080720.4 251 250 278 231 185 206 179 178 186 110 180 185 250 255 297 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XQW8_CAPBA) AT3G06920 Solyc01g080740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g080750.3 211 2002 1826 2785 5042 4891 4885 5214 2292 1206 2064 2822 308 1269 1012 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1P293_ARTAN) AT4G15830 Solyc01g080760.4 787 1046 1087 1136 1225 1227 1177 1263 1015 823 1064 1121 823 1156 1021 ABC subfamily C protein (AHRD V3.3 *-* AT4G15820.1) AT4G15820 Solyc01g080770.3 982 2280 2013 1757 3916 3338 3039 3879 2009 1572 1654 2138 2256 2338 1172 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A061DVS1_THECC) AT4G20270 Solyc01g080780.2 656 682 695 584 695 739 720 725 888 490 667 639 526 830 546 Translocase of chloroplast, chloroplastic (AHRD V3.3 *** A0A2G3ALC2_CAPAN) Solyc01g080785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor, MADS-box (AHRD V3.3 *** A0A2U1P6T8_ARTAN) Solyc01g080790.3 19 265 293 233 201 117 127 109 388 204 444 294 146 160 29 Plant basic secretory protein (BSP) family protein (AHRD V3.3 *** I3SK49_MEDTR) AT2G15220 Solyc01g080800.3 70 31 64 31 8 4 1 1 40 51 73 17 163 41 51 Basic secretory family protein (AHRD V3.3 *** A0A2K3LW23_TRIPR) Solyc01g080810.3 592 837 705 673 635 605 666 775 779 593 682 673 753 801 830 Isoleucine--tRNA ligase (AHRD V3.3 *** A0A1J3CFD6_NOCCA) AT5G49030 Solyc01g080820.1 0 0 0 3 1 0 0 2 0 0 2 1 0 0 0 similar to RCD one 3 (AHRD V3.3 --* AT1G70440.2) Solyc01g080830.3 82 98 203 161 170 186 195 168 135 136 190 147 134 110 108 Ribosomal L7Ae/L30e/S12e/Gadd45 family protein (AHRD V3.3 *** A0A2K3L785_TRIPR) AT4G01790 Solyc01g080840.3 1467 1211 1191 1117 1022 1225 1264 1044 1360 995 1217 1039 805 1169 1501 Protein translocase subunit SecA (AHRD V3.3 *** A0A2G3DHH8_CAPCH) AT4G01800 Solyc01g080850.4 3410 2821 2137 2804 2598 2561 3064 3263 2490 3960 2441 3013 2195 2723 2393 Protein transport protein SEC23 (AHRD V3.3 *** A0A2G3DHG4_CAPCH) AT4G01810 Solyc01g080860.3 1128 887 713 852 632 745 805 754 761 814 869 626 932 955 961 Protoheme IX farnesyltransferase, mitochondrial (AHRD V3.3 *** A0A2G2XSW4_CAPBA) AT2G44520 Solyc01g080870.3 51 47 3 11 0 0 0 2 5 59 24 2 3 5 18 Protein NRT1/ PTR FAMILY 7.3 (AHRD V3.3 *** A0A2G3DJ73_CAPCH) AT1G32450 Solyc01g080880.4 1212 1470 1621 1567 1742 1720 1642 1599 1652 1333 1281 1613 1463 1744 1501 Protein kinase domain (AHRD V3.3 *** A0A200QMD2_9MAGN) AT5G46570 Solyc01g080890.2 140 165 342 119 223 201 264 200 157 116 325 102 167 136 93 hypothetical protein (AHRD V3.3 -** AT1G32460.1) Solyc01g080900.4 278 205 138 280 210 161 124 124 235 212 100 213 170 207 297 Cytochrome P450 (AHRD V3.3 *** A0A200PPF3_9MAGN) AT2G32440 Solyc01g080910.2 1521 1694 778 1462 1656 1118 910 1734 2084 4144 1282 3756 1359 1692 658 polyadenylate-binding protein 1-B-binding protein (AHRD V3.3 *** AT5G44860.2) Solyc01g080920.3 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2XSX8_CAPBA) Solyc01g080930.4 992 888 995 961 838 909 890 692 903 880 949 775 975 928 1009 3-hydroxyisobutyryl-CoA hydrolase 1 (AHRD V3.3 *** A0A2G2XSY1_CAPBA) AT5G65940 Solyc01g080940.3 945 819 827 770 1026 821 844 1030 1062 1013 850 1088 1018 813 1077 5-hydroxyisourate hydrolase (AHRD V3.3 *** S8EER2_9LAMI) AT5G58220 Solyc01g080950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 late embryogenesis abundant protein 6-like (AHRD V3.3 *** XP_019068772.1) Solyc01g080960.4 20 11 6 5 11 23 15 23 9 15 3 37 5 25 5 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2K3MWW8_TRIPR) Solyc01g080970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1L2R0_ARTAN) AT3G11480 Solyc01g080980.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g080990.3 13 5 12 17 10 11 10 8 15 11 12 14 4 8 19 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1LGR9_ARTAN) AT3G11480 Solyc01g081000.3 11 21 41 18 39 34 35 15 14 11 18 20 35 12 26 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1NN53_ARTAN) Solyc01g081010.4 10155 11185 9150 6822 10890 12792 11145 10945 7598 6146 6674 7782 9867 10309 9168 Nucleolar GTP-binding protein 1 (AHRD V3.3 *** A0A1U8EKU8_CAPAN) AT1G50920 Solyc01g081020.1 53 36 49 69 23 54 45 30 52 53 26 85 37 103 86 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q8N4_9MAGN) AT4G37380 Solyc01g081030.4 1464 1380 1234 1427 1467 1406 1578 1391 1217 1314 1013 1334 1425 1404 1158 protein SCAI homolog (AHRD V3.3 *** A0A2I4HT97_9ROSI) AT3G03570 Solyc01g081033.1 6 0 0 0 0 1 0 0 1 0 0 0 1 0 0 Unknown protein Solyc01g081037.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g081040.4 11 20 24 29 60 39 35 43 16 24 43 43 11 10 91 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LC40_ARTAN) AT3G03550 Solyc01g081050.4 788 596 629 621 547 650 730 519 649 540 594 575 499 708 776 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200PXA7_9MAGN) AT5G35930 Solyc01g081060.4 559 523 327 308 64 67 31 44 271 350 601 349 369 283 439 Solyc01g081060 AT1G32170 Solyc01g081070.3 1480 1561 1260 1369 1187 1236 1396 1452 1334 1495 1224 1427 1526 1607 1463 Protein transport protein SEC23 (AHRD V3.3 *** A0A2G3ALY9_CAPAN) AT2G21630 Solyc01g081080.3 2 4 0 2 5 1 1 0 11 1 0 2 5 1 20 replication factor C subunit 3 (AHRD V3.3 *** A0A2I4FP32_9ROSI) Solyc01g081090.2 0 0 0 0 0 5 0 0 1 1 4 0 3 6 0 bHLH transcription factor 003 Solyc01g081100.3 0 0 0 1 0 1 1 0 0 0 1 0 1 0 0 bHLH transcription factor 004 AT2G31210 Solyc01g081110.4 66 52 80 59 35 30 44 65 59 40 19 45 59 94 44 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R2L0_9MAGN) Solyc01g081120.2 74 109 102 103 88 114 102 89 79 64 94 121 162 114 105 Complex 1 LYR protein (AHRD V3.3 *** A0A2U1PWJ3_ARTAN) AT1G65032 Solyc01g081125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MLP-like protein 43 (AHRD V3.3 *** A0A2U1L1Z2_ARTAN) Solyc01g081140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1Q0P6_ARTAN) AT5G17580 Solyc01g081150.3 459 418 520 403 426 415 363 433 360 295 376 417 633 477 466 DNA-directed RNA polymerases I, II, and III subunit RPABC3 (AHRD V3.3 *** A0A2U1P010_ARTAN) Solyc01g081160.4 0 0 0 2 0 0 0 2 1 0 0 0 7 0 25 Beta-glucosidase 11 (AHRD V3.3 *-* A0A2G2W098_CAPBA) Solyc01g081170.3 0 0 1 7 0 3 0 0 0 1 0 0 0 4 11 Beta-glucosidase 10 (AHRD V3.3 *-* A0A2G2ZW54_CAPAN) Solyc01g081180.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta glucosidase (AHRD V3.3 *-* I0J3H1_ARAHH) Solyc01g081185.1 10 9 3 17 4 15 5 16 5 5 17 11 7 11 12 Unknown protein Solyc01g081190.4 688 277 239 273 103 121 128 103 253 295 238 153 315 404 448 Calcium-binding EF hand family protein (AHRD V3.3 *** A0A2U1PWG2_ARTAN) AT1G64850 Solyc01g081200.3 113 99 243 172 153 182 168 167 146 143 175 170 126 186 167 hypothetical protein (AHRD V3.3 *** AT5G17610.1) AT5G17610 Solyc01g081210.4 36 48 49 96 28 30 21 20 52 46 65 30 99 64 136 F-box/kelch-repeat protein SKIP25-like (AHRD V3.3 *** A0A2I4FQ36_9ROSI) Solyc01g081220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phenylalanyl-tRNA synthetase (AHRD V3.3 *-* A0A2U1MCM3_ARTAN) Solyc01g081230.2 23 30 49 31 18 53 53 39 27 26 61 23 31 38 100 Unknown protein Solyc01g081240.3 46 41 50 55 23 50 46 48 59 18 41 41 29 45 42 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0VN18_9ASPA) Solyc01g081250.3 2 12 6 21 48 56 31 47 23 30 12 24 7 5 0 Glutathione S-transferase (AHRD V3.3 *** A0A200PVK3_9MAGN) Solyc01g081260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *-* A0A200QF27_9MAGN) Solyc01g081270.2 160 139 15 28 4 1 3 7 13 46 30 19 369 38 50 Glutathione S-transferase (AHRD V3.3 *** A0A200PVK3_9MAGN) AT2G29420 Solyc01g081290.4 357 317 363 395 353 439 461 389 317 294 346 343 287 394 402 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3ALT8_CAPAN) AT3G03580 Solyc01g081280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2U1PSN8_ARTAN) Solyc01g081300.4 402 580 387 403 625 535 551 647 405 391 383 533 720 517 272 Phosphoribosylaminoimidazole-succinocarboxamide synthase (AHRD V3.3 *** A0A2G3DIS8_CAPCH) AT3G21110 Solyc01g081310.3 98 37 32 32 0 1 0 0 11 6 33 2 30 56 133 glutathione S-transferase T3 AT2G29420 Solyc01g081320.4 334 236 195 296 272 260 352 297 399 232 220 293 141 269 203 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QXT6_9MAGN) AT5G27460 Solyc01g081330.3 294 296 198 215 281 264 243 258 267 162 181 205 232 256 217 Chaperone protein DnaJ (AHRD V3.3 *** A0A2U1QKJ2_ARTAN) AT1G28210 Solyc01g081340.4 58 81 74 64 117 83 82 62 141 99 84 83 86 98 39 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PMX3_ARTAN) AT5G04370 Solyc01g081350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aspartic proteinase cdr1 (AHRD V3.3 *** A0A314KJZ9_NICAT) Solyc01g081360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g081370.4 0 5 7 12 6 15 5 15 4 6 1 10 11 5 5 aspartic proteinase CDR1-like (AHRD V3.3 *** A0A1U7UZK6_NICSY) AT1G64830 Solyc01g081380.4 74 241 298 244 367 290 321 429 361 241 240 375 266 308 289 nuclear matrix protein 1 AT5G17620 Solyc01g081390.4 487 901 893 1027 1022 1271 1190 1127 976 839 801 1095 959 1017 970 Xylulose 5-phosphate/phosphate translocator, chloroplastic (AHRD V3.3 *** A0A1U8EHP7_CAPAN) AT5G17630 Solyc01g081400.3 344 307 232 212 221 204 218 233 284 262 292 323 247 289 206 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3BBR1_CEPFO) Solyc01g081410.4 15 63 32 68 122 123 92 98 93 50 34 94 31 66 112 Major facilitator superfamily protein (AHRD V3.3 *** F4KD53_ARATH) Solyc01g081420.3 59 54 14 50 82 33 54 57 99 76 44 58 49 100 18 Armadillo-type fold (AHRD V3.3 *-* A0A2U1LY20_ARTAN) Solyc01g081430.4 2419 1942 1792 1904 1753 1859 2051 1685 1938 1677 1736 1740 1569 2164 2408 Armadillo-type fold (AHRD V3.3 *** A0A2U1LXZ4_ARTAN) Solyc01g081440.3 380 610 1033 771 896 996 993 866 1145 608 1084 598 847 748 550 DUF1005 domain-containing protein (AHRD V3.3 *** A0A1Q3BB96_CEPFO) AT5G17640 Solyc01g081450.3 1565 1245 1338 1289 1235 949 985 1307 1462 1801 1208 1307 1522 1240 1255 glycine-rich protein A3 (AHRD V3.3 --* XP_004229538.1) Solyc01g081455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) ATMG00240 Solyc01g081460.3 166 148 150 151 184 207 236 192 145 162 143 126 91 190 201 tRNA (Guanine-N-7) methyltransferase (AHRD V3.3 *** A0A200R6M4_9MAGN) AT5G17660 Solyc01g081470.4 112 240 156 230 184 250 201 216 180 126 164 207 280 307 276 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (AHRD V3.3 *** A0A2G2XRB6_CAPBA) AT5G57300 Solyc01g081480.3 162 217 78 144 231 278 286 233 136 115 86 103 161 91 108 GPI inositol-deacylase PGAP1-like protein (AHRD V3.3 *** A0A2U1LZR3_ARTAN) AT5G17670 Solyc01g081490.3 208 429 329 336 415 410 502 407 487 267 307 366 235 399 317 RNA polymerase sigma factor (AHRD V3.3 *** A0A1U8EM77_CAPAN) AT1G08540 Solyc01g081500.4 2190 1967 2295 1859 2131 1976 1871 1900 1997 1637 2052 1966 2316 2137 1971 heterochromatin protein 1-like protein AT5G17690 Solyc01g081510.4 235 222 249 216 255 215 187 233 201 222 186 240 213 214 259 2-hydroxy-3-oxopropionate reductase (AHRD V3.3 *** A0A2Z5T525_9BACI) AT1G71170 Solyc01g081520.3 1761 2132 1825 1748 1615 1637 1633 1538 1532 1276 1322 1445 2235 2192 1700 UTP--glucose-1-phosphate uridylyltransferase-like (AHRD V3.3 *** A0A2I4HSM6_9ROSI) Solyc01g081530.3 0 1 0 0 4 3 1 1 0 3 0 5 0 2 0 Annexin (AHRD V3.3 *-* A0A2G3DIN6_CAPCH) Solyc01g081540.4 482 895 824 967 743 710 927 818 1017 709 888 435 748 686 1513 Myosin-17 (AHRD V3.3 *** A0A2G3ALU8_CAPAN) AT2G31900 Solyc01g081560.2 35 57 28 71 96 87 87 73 60 33 15 65 48 72 74 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QMV3_9MAGN) AT1G16480 Solyc01g081570.3 819 1655 1515 1229 2291 2184 2457 2417 1931 1448 1682 1274 1341 1182 1014 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3BKR6_CEPFO) Solyc01g081580.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A068UGG0_COFCA) Solyc01g081582.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nucleotide/sugar transporter family protein (AHRD V3.3 --* AT5G55950.4) Solyc01g081584.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc01g081586.1 7 0 1 1 1 0 0 0 1 1 0 0 1 0 0 Callose synthase-like protein (AHRD V3.3 *-* Q7XJC6_ORYSJ) Solyc01g081588.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A2P4M3N9_QUESU) Solyc01g081590.4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A2G2XRN2_CAPBA) Solyc01g081600.3 5 5 10 9 0 0 0 0 1 2 0 0 8 8 26 Non-specific lipid-transfer protein (AHRD V3.3 *** K4AY52_SOLLC) AT2G18370 Solyc01g081605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc01g081610.3 1074 986 1007 1836 1184 972 1154 1502 1348 3085 1266 1445 2062 1417 700 Beta-hexosaminidase (AHRD V3.3 *** A0A2G2XRM6_CAPBA) AT1G05590 Solyc01g081620.3 7 6 15 15 8 4 7 0 12 10 16 9 6 5 32 Vacuolar protein sorting-associated protein 62 (AHRD V3.3 *** A0A200RA51_9MAGN) AT2G44260 Solyc01g081630.4 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 UPSTREAM OF FLC-like protein (DUF966) (AHRD V3.3 *-* F4J7X6_ARATH) AT1G05577 Solyc01g081640.4 55 98 169 188 178 161 143 174 104 183 100 282 82 135 104 DUF936 domain-containing protein (AHRD V3.3 *** A0A1Q3BMN1_CEPFO) AT2G31920 Solyc01g073650.3 4893 3390 2685 3410 2774 3033 3040 2789 2699 3217 2769 2913 2994 2714 3296 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A1U8EGY9_CAPAN) AT3G58500 Solyc01g073660.3 1366 686 555 718 353 447 422 398 561 893 551 656 516 562 568 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1LP11_ARTAN),Pfam:PF13347 AT2G44280 Solyc01g073670.3 0 2 2 34 4 14 10 10 4 3 3 7 5 12 1 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1LP11_ARTAN),Pfam:PF13347 Solyc01g073680.4 582 636 1254 1155 986 957 954 1115 1035 1170 902 1038 811 821 1067 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A061DVR0_THECC) AT2G44300 Solyc01g073690.2 1393 2220 2696 2382 2646 2235 2270 2260 2571 1961 2499 2193 2801 2374 3184 V-type proton ATPase subunit D (AHRD V3.3 *** A0A2G2WYU9_CAPBA) AT3G58730 Solyc01g073700.3 0 4 11 1 0 5 0 1 2 3 0 0 0 3 29 Unknown protein Solyc01g073710.2 746 558 508 480 352 260 291 348 518 771 410 364 670 407 485 Calcium-binding EF-hand family protein (AHRD V3.3 *** O64866_ARATH) AT2G44310 Solyc01g073720.2 7 5 1 13 0 0 0 0 0 0 1 0 4 1 13 Transmembrane protein (AHRD V3.3 *** Q8LC91_ARATH) AT1G05575 Solyc01g073730.4 458 409 394 388 245 305 317 257 351 332 298 344 396 443 505 GTP 3',8-cyclase, mitochondrial (AHRD V3.3 *** CNX2_ARATH) AT2G31955 Solyc01g073740.4 809 1643 1709 1561 1679 1691 1888 1809 1736 1603 1483 1680 2152 1731 1617 Citrate synthase (AHRD V3.3 *** A0A2G3ALM4_CAPAN) AT2G44350 Solyc01g073750.4 7642 5503 4445 4721 5048 5225 5243 5502 6643 6534 3728 4338 4763 4898 5078 Callose synthase (AHRD V3.3 *** K7PRK8_MAIZE) AT2G31960 Solyc01g073770.2 7267 2645 1887 2041 2071 1878 1658 1935 2331 4131 2225 2665 2067 2011 1712 PRLI-interacting factor (AHRD V3.3 *-* AT5G19900.5) Solyc01g073780.2 3 21 21 9 17 16 15 29 20 15 16 15 13 6 26 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** Q9SL28_ARATH) Solyc01g073800.2 0 0 0 0 0 1 0 1 0 0 0 6 0 2 0 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** A0A2U1L9L8_ARTAN) Solyc01g073810.2 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** A0A2U1L9L8_ARTAN) Solyc01g073820.4 25 9 25 5 4 2 0 0 17 9 22 8 28 4 0 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** A0A2U1L9L8_ARTAN) Solyc01g073840.1 4 4 1 3 2 0 0 0 5 3 7 0 25 22 0 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** Q9SL28_ARATH) AT2G44380 Solyc01g073850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *-* Q9SL28_ARATH) Solyc01g073860.3 0 1 0 0 0 0 0 0 6 3 7 0 0 0 0 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** Q9SL28_ARATH) AT2G44380 Solyc01g073870.4 1146 558 544 549 456 409 429 484 576 570 477 492 564 627 677 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3I9M9_9ROSI) Solyc01g073880.2 43 10 27 18 3 4 11 3 23 15 24 15 11 7 25 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** Q9SL28_ARATH) AT2G28270 Solyc01g073890.3 63 27 51 25 0 9 0 6 27 23 108 4 49 86 55 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *-* Q9ZUW8_ARATH) Solyc01g073900.4 267 293 321 272 281 353 277 301 284 242 281 291 311 325 303 E3 ubiquitin-protein ligase (AHRD V3.3 *-* A0A2G3D341_CAPCH) Solyc01g073905.1 9 2 0 9 2 5 0 0 3 0 0 1 3 13 0 Unknown protein Solyc01g073910.4 3519 1589 1917 1632 1908 1813 1688 1582 1367 2909 1819 1868 1668 2533 1451 Homeobox-leucine zipper protein HOX27 (AHRD V3.3 *** A0A2G2XRN9_CAPBA) AT5G06710 Solyc01g073920.3 1618 1382 1348 2515 1452 1336 1775 1738 760 2420 1205 1452 1829 2307 798 Proline-rich family protein (AHRD V3.3 *** Q8GYK6_ARATH) AT2G32840 Solyc01g073930.3 209 234 270 268 388 387 351 254 279 218 311 254 259 317 301 Protein N-terminal asparagine amidohydrolase (AHRD V3.3 *** A0A200QRE4_9MAGN) AT2G44420 Solyc01g073940.3 394 379 569 499 452 525 430 454 492 360 463 496 433 439 478 Zinc finger transcription factor 9 AT5G06770 Solyc01g073950.4 1444 1370 1599 1129 1112 1193 1083 1123 1678 1125 1417 1148 1774 1906 1655 Myb_DNA-binding domain-containing protein/Bromodomain domain-containing protein (AHRD V3.3 *** A0A1Q3CDP2_CEPFO) AT2G44430 Solyc01g073960.4 2790 2079 1894 1847 1836 2051 1889 1886 1894 2001 2141 1875 2115 1829 1698 Protein EMSY-LIKE 3 (AHRD V3.3 *** A0A2G3DHH9_CAPCH) AT2G44440 Solyc01g073970.3 0 0 5 3 0 4 0 1 3 0 0 0 1 1 1 Histone H3 (AHRD V3.3 *** B3TM40_ELAGV) AT1G09200 Solyc01g073980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g073985.1 20 18 27 21 6 12 6 17 19 14 6 1 1 23 20 Disease resistance protein (AHRD V3.3 *** A0A200RBM1_9MAGN) Solyc01g074000.3 118 2617 2479 2005 2993 3117 2966 3229 1639 1002 1663 2538 732 1773 702 Histone H3 (AHRD V3.3 *** D8L9K7_WHEAT) AT1G09200 Solyc01g074010.4 1146 1706 1873 1618 1770 1694 1671 1662 1739 1208 2013 1385 1995 1828 2451 Protein kinase domain (AHRD V3.3 *** A0A200RDU7_9MAGN) AT2G32850 Solyc01g074020.3 179 276 200 232 308 224 199 235 208 159 177 234 299 280 207 Zinc finger, HIT-type (AHRD V3.3 *** A0A2U1P2A6_ARTAN) Solyc01g074030.3 1326 3823 1515 3844 4114 3527 3996 4375 3947 2020 2286 2919 3635 2762 4683 Beta-glucosidase (AHRD V3.3 *** Q43014_PRUAV) Solyc01g074040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-glucosidase 12 (AHRD V3.3 *** A0A2G3DGP1_CAPCH) Solyc01g074050.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-glucosidase (AHRD V3.3 *-* Q43014_PRUAV) Solyc01g074060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-glucosidase 12 (AHRD V3.3 *-* A0A2G3DGQ8_CAPCH) Solyc01g086640.2 188 142 415 127 201 269 321 187 202 111 731 213 71 124 143 O-fucosyltransferase (AHRD V3.3 *** A0A2P5FQR3_TREOI) AT2G44500 Solyc01g086650.3 266 397 422 436 397 496 447 343 378 284 512 331 597 412 485 Uroporphyrinogen-III C-methyltransferase (AHRD V3.3 *** A0A2I0V6U1_9ASPA) AT5G40850 Solyc01g086660.2 123 25 35 38 6 8 3 2 16 9 25 10 61 40 45 Unknown protein Solyc01g086670.3 434 225 105 129 0 2 7 0 16 175 125 20 336 129 197 Unknown protein Solyc01g086680.4 83 119 12 11 0 0 0 0 9 64 22 9 264 58 72 glutathione S-transferase T1 Solyc01g086690.2 19 442 416 413 590 615 717 572 403 212 231 505 245 427 115 Sister chromatid cohesion 1 protein 4 (AHRD V3.3 *** A0A2G3DGK5_CAPCH) AT3G59550 Solyc01g086700.4 1 5 8 6 15 6 8 11 14 7 3 6 0 1 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061DXG0_THECC) Solyc01g086710.4 1936 1643 1468 1277 783 953 989 908 969 1019 981 931 1710 1956 1632 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** A0A2G3AK33_CAPAN) AT1G29940 Solyc01g086720.3 94 118 218 167 155 158 134 97 143 147 276 93 126 214 202 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061DXG0_THECC) AT5G48060 Solyc01g086730.4 17 6 2 1 0 4 1 0 2 1 15 1 0 6 0 magnesium transporter%2C putative (DUF803) (AHRD V3.3 *** AT3G26670.4) AT3G26670 Solyc01g086740.3 1501 1359 1103 973 856 953 1027 976 935 883 834 926 1551 1339 1165 Chaperone protein dnaJ (AHRD V3.3 *** B6TA99_MAIZE) AT5G48030 Solyc01g086750.4 3263 5024 3722 3700 3769 3622 3959 4270 4207 3722 2729 3350 4775 4784 3866 Clustered mitochondria protein (AHRD V3.3 *** A0A2G3DGP3_CAPCH) AT3G52140 Solyc01g086760.4 0 5 0 0 0 0 1 3 2 0 0 1 0 4 0 Histone H3 (AHRD V3.3 *** A0A2K3KMV3_TRIPR) Solyc01g086770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 --* AT3G19940.1) Solyc01g086780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g086790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g086800.4 0 2 1 1 2 0 2 4 0 2 0 1 0 3 0 Histone H3 (AHRD V3.3 *** B6SYV0_MAIZE) Solyc01g086810.2 49 46 39 42 7 9 11 6 36 26 10 7 33 31 128 disease resistance protein RPM1-like (AHRD V3.3 *** A0A2I4DV93_9ROSI) Solyc01g086815.1 0 4 0 5 6 9 4 6 0 2 18 1 1 2 0 Unknown protein Solyc01g086820.4 327 4800 5494 5365 8148 8503 7524 7937 2980 2598 4215 6194 1376 4538 2098 Histone H3 (AHRD V3.3 *-* A0A2P6TS80_CHLSO) AT1G09200 Solyc01g086830.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1N9B3_ARTAN) AT3G07450 Solyc01g086840.3 2 7 0 2 1 0 0 0 2 0 1 0 4 0 3 Thaumatin-like protein (AHRD V3.3 *** A0A2U1L7J3_ARTAN) Solyc01g086850.3 149 123 138 138 137 141 161 135 112 128 218 114 129 104 166 Ras gtpase (AHRD V3.3 *** A0A1J9QT15_9PEZI) AT5G47960 Solyc01g086860.3 1051 947 1106 953 789 1008 1046 777 854 825 1299 842 941 947 1287 Expressed protein (AHRD V3.3 *** AT4G25315.2) AT4G25315 Solyc01g086870.3 663 273 537 366 134 128 159 129 424 520 567 166 264 275 519 bHLH transcription factor 076 Solyc01g086880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (AHRD V3.3 *-* E5KUE8_CORLA) Solyc01g086890.3 4952 3604 3539 3586 3350 3398 3614 3362 3858 3548 3799 3183 3750 3701 4410 G-patch domain-containing protein/Surp domain-containing protein (AHRD V3.3 *** A0A1Q3BXL6_CEPFO) AT3G52120 Solyc01g086900.4 233 382 419 432 476 459 467 401 325 375 484 442 283 355 385 tRNA (Cytidine(34)-2'-O)-methyltransferase-like protein (AHRD V3.3 *** A0A2K3NGI4_TRIPR) AT5G26880 Solyc01g086920.3 1590 6042 5874 8317 13037 9717 10173 14649 11286 7914 9346 10108 3290 4631 5494 Leucine-rich repeat receptor-like protein (AHRD V3.3 *** H6V789_MALDO) Solyc01g086930.4 65 267 291 298 481 465 461 499 339 181 250 470 117 260 226 protein gamma response 1 (AHRD V3.3 *** A0A2I4FRY7_9ROSI) AT3G52115 Solyc01g086940.2 202 259 237 156 256 150 182 268 284 187 113 172 288 234 163 Zinc finger CCCH domain-containing protein (AHRD V3.3 *-* A0A2K3NPU7_TRIPR) Solyc01g086950.4 576 455 512 652 509 612 659 518 517 429 498 571 677 619 555 Zinc finger CCCH domain-containing protein (AHRD V3.3 *-* A0A2K3NS98_TRIPR) Solyc01g086960.3 4165 3497 6530 2626 2907 2442 2328 2058 3512 3005 9001 2582 4216 3295 6373 Zinc finger A20 and AN1 domain stress-associated protein (AHRD V3.3 *** A0A2K3LXD0_TRIPR) AT3G12630 Solyc01g086970.4 4145 2012 2310 2020 1700 1809 1715 1466 1814 1821 2601 2021 2209 2354 3966 Zinc finger A20 and AN1 domain-containing stress-associated protein 8 (AHRD V3.3 *** A0A2G2XRT9_CAPBA) AT1G51200 Solyc01g086975.1 62 15 5 12 10 16 13 15 18 17 10 7 37 26 15 Unknown protein Solyc01g086980.4 1040 869 961 908 738 841 863 796 780 759 896 718 855 931 958 RRM_1 domain-containing protein/PWI domain-containing protein (AHRD V3.3 *** A0A1Q3BXM3_CEPFO) AT3G12640 Solyc01g086990.3 1690 1600 1242 1067 1242 1164 1106 1444 1604 1350 1196 1489 1529 1480 1577 Pre-mRNA-splicing factor SYF1 (AHRD V3.3 *** A0A1U8G7X9_CAPAN) AT5G28740 Solyc01g087000.3 147 75 104 135 82 95 80 49 65 64 130 38 104 77 93 Unknown protein Solyc01g087005.1 16 26 22 10 19 24 20 22 13 20 23 20 11 28 27 Unknown protein Solyc01g087010.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) Solyc01g087015.1 10 0 7 5 0 1 5 3 2 1 0 0 2 11 6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc01g087020.2 93 89 394 111 71 72 72 71 77 102 264 86 103 91 336 Unknown protein Solyc01g087030.3 1897 747 693 797 610 657 566 563 644 979 749 743 550 734 1010 Zinc finger transcription factor 10 AT3G08505 Solyc01g087040.2 345 285 130 736 580 541 1064 662 320 776 264 363 145 196 229 Photosystem II PsbP (AHRD V3.3 *** A0A200Q959_9MAGN) AT3G63540 Solyc01g087050.3 230 144 67 138 134 86 66 97 81 94 109 172 89 93 151 Zinc finger protein (AHRD V3.3 *** A0A200QA40_9MAGN) Solyc01g087060.4 1865 645 622 811 518 543 426 464 649 888 910 741 500 561 450 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NQN4_ARTAN) AT3G63530 Solyc01g087070.4 99 90 120 145 92 124 145 120 67 67 73 85 127 124 128 ADP,ATP carrier protein, mitochondrial (AHRD V3.3 *** A0A2U1N934_ARTAN) Solyc01g087075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g087080.4 54 551 334 681 1194 1216 1212 1075 430 159 435 549 38 278 223 interferon-activable protein (AHRD V3.3 *** AT3G52110.2) AT3G52110 Solyc01g087090.3 243 141 174 194 138 164 170 146 97 205 158 147 112 172 214 Unknown protein Solyc01g087095.2 37 114 248 176 279 358 373 284 160 101 158 209 57 156 27 Telomerase reverse transcriptase (AHRD V3.3 *** A0A2G2XQD1_CAPBA) AT5G16850 Solyc01g087120.3 3005 3596 3146 2597 3470 3038 2703 3746 3522 3242 2401 3215 3615 3205 2781 ATP synthase subunit O, mitochondrial (AHRD V3.3 *** A0A2G2XQH2_CAPBA) AT5G13450 Solyc01g087130.4 1 21 27 31 24 11 18 14 9 14 25 20 4 14 74 R2R3MYB transcription factor 47 Solyc01g087140.4 89 341 489 322 850 885 825 964 346 207 342 783 245 454 178 Late embryogenesis abundant protein (AHRD V3.3 *-* A0A200QZY3_9MAGN) AT3G08490 Solyc01g087150.3 71 88 171 200 92 51 57 67 101 170 62 62 177 73 63 Protein DETOXIFICATION (AHRD V3.3 *** A0A328DUA2_9ASTE) AT3G08040 Solyc01g087160.2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 6 Unknown protein Solyc01g087170.3 10709 9698 7813 10190 10314 10719 10231 9975 8268 10148 9058 9039 9090 9091 8913 Zinc finger transcription factor 11 AT2G41900 Solyc01g087180.4 4085 441 123 167 0 0 0 0 166 853 351 245 120 545 1575 Expressed protein (AHRD V3.3 *-* AT1G07985.1) AT1G07985 Solyc01g087190.4 819 442 402 460 571 545 530 533 424 557 498 530 332 335 306 Chaperonin-like RbcX (AHRD V3.3 *** A0A200R9J6_9MAGN) Solyc01g087200.3 395 336 285 396 411 394 380 346 401 368 332 350 306 348 525 Disease resistance protein (AHRD V3.3 *** A0A2U1Q201_ARTAN) Solyc01g087210.3 3001 3956 4402 4486 3825 4198 4342 4031 5341 5173 5455 4053 3775 3356 5207 Cellulose synthase (AHRD V3.3 *** M1A916_SOLTU) AT5G05170 Solyc01g087230.3 2134 1437 1122 1137 1013 1202 988 1214 1142 1496 1153 1261 1413 1389 1338 Mediator of RNA polymerase II transcription subunit 27 (AHRD V3.3 *** A0A2G3DH44_CAPCH) AT3G09180 Solyc01g087240.3 9302 3740 3432 3842 1515 1624 1487 1342 3747 4094 4102 3064 4911 5205 6118 Nuclear transcription factor Y subunit A-9 (AHRD V3.3 *** A0A1U8DTI1_CAPAN) Solyc01g087250.3 758 598 663 619 718 732 718 767 814 842 611 744 722 694 588 carotenoid cleavage dioxygenase 1A AT3G63520 Solyc01g087260.4 2964 1815 1202 1346 1461 1386 1348 1438 1996 1852 1551 1619 1413 1419 1801 carotenoid cleavage dioxygenase 1B AT3G63520 Solyc01g087270.3 0 1 0 0 0 0 0 0 1 1 0 0 0 0 3 Carotenoid cleavage dioxygenase 1 (AHRD V3.3 *-* A0A160HSC8_VACMY) Solyc01g087280.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LRJ2_ARTAN) Solyc01g087290.3 1299 1031 903 999 935 824 848 892 837 948 924 872 674 911 1001 tRNA-dihydrouridine synthase (AHRD V3.3 *** A0A2G3DGY4_CAPCH) AT3G63510 Solyc01g087300.3 781 1001 878 984 950 868 1012 941 700 749 835 739 1033 999 911 tRNA-dihydrouridine synthase (AHRD V3.3 *** A0A2G3DGY0_CAPCH) AT3G63510 Solyc01g087320.3 745 423 404 491 469 476 526 337 433 280 446 306 332 528 631 Zinc finger, FYVE/PHD-type (AHRD V3.3 *-* A0A2U1NX02_ARTAN) AT3G08020 Solyc01g087330.4 248 147 194 210 206 198 306 116 132 109 179 147 155 197 322 RING/FYVE/PHD-type zinc finger family protein (AHRD V3.3 *-* A0A2U1QBS4_ARTAN) Solyc01g087340.3 62 48 44 50 50 58 48 25 50 49 53 57 62 63 31 tRNA-dihydrouridine synthase (AHRD V3.3 *-* A0A2G3AKC9_CAPAN) Solyc01g087350.3 10 9 10 7 5 16 14 23 19 14 15 12 8 7 36 Unknown protein Solyc01g087360.3 3 5 8 14 6 8 14 3 5 9 6 5 4 4 8 RING/FYVE/PHD-type zinc finger family protein (AHRD V3.3 *-* A0A2U1QBS4_ARTAN) Solyc01g087370.2 663 335 425 434 194 386 343 176 272 265 440 243 255 396 531 RING/FYVE/PHD-type zinc finger family protein (AHRD V3.3 *-* A0A2U1QBS4_ARTAN) Solyc01g087390.2 88 88 35 65 38 40 57 61 68 56 66 54 40 93 16 RING/FYVE/PHD-type zinc finger family protein (AHRD V3.3 *-* A0A178V841_ARATH) Solyc01g087400.4 1190 555 660 659 453 597 698 364 553 415 799 466 462 723 1305 RING/FYVE/PHD-type zinc finger family protein (AHRD V3.3 *** A0A2U1QBS4_ARTAN) Solyc01g087410.4 243 143 104 105 99 87 132 146 143 149 91 127 86 174 72 Zinc finger, FYVE/PHD-type (AHRD V3.3 *-* A0A2U1NX02_ARTAN) Solyc01g087420.4 875 418 441 480 265 433 464 308 412 330 436 295 284 443 596 Zinc finger, FYVE/PHD-type (AHRD V3.3 *** A0A2U1NX02_ARTAN) AT3G08020 Solyc01g087430.3 1551 1135 884 856 774 897 844 959 1072 937 971 948 887 1090 1021 Zinc finger, FYVE/PHD-type (AHRD V3.3 *** A0A2U1NX02_ARTAN) AT3G08020 Solyc01g087440.3 2 6 3 4 7 5 16 26 10 10 10 20 10 12 18 Arm repeat superfamily protein (AHRD V3.3 *-* A0A2K3NTC9_TRIPR) Solyc01g087450.3 98 135 90 164 128 217 202 175 255 225 294 306 161 163 151 Arm repeat superfamily protein (AHRD V3.3 *** A0A2K3NMK6_TRIPR) Solyc01g087460.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1L3D8_ARTAN) AT2G34740 Solyc01g087470.3 680 690 710 613 655 703 625 891 848 626 672 750 735 662 653 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G3DGW7_CAPCH) AT3G21640 Solyc01g087490.4 3431 1980 1907 1625 1262 1293 1291 1474 2007 2696 1988 1708 1784 1858 1870 Protein OBERON (AHRD V3.3 *** A0A200R9K2_9MAGN) AT3G63500 Solyc01g087500.3 441 2620 2036 2695 4973 4615 4495 6021 3393 1867 2510 4212 727 1878 1359 DNA topoisomerase 2 (AHRD V3.3 *** A0A2G2XSS9_CAPBA) AT3G23890 Solyc01g087510.3 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 LRR receptor-like serine/threonine-protein kinase FLS2 (AHRD V3.3 *** A0A1U8FHU6_CAPAN) AT2G34930 Solyc01g087520.3 528 545 529 1165 729 572 767 799 646 959 799 787 576 646 530 Ferredoxin-thioredoxin reductase, variable chain (AHRD V3.3 *** A0A2G2XSR5_CAPBA) AT5G23440 Solyc01g087525.1 1 1 0 0 4 0 5 4 2 0 2 0 1 4 0 Unknown protein Solyc01g087530.3 521 568 591 610 610 546 509 605 566 657 710 534 741 701 460 Zinc transporter (AHRD V3.3 *** A0A2K3NPL0_TRIPR) AT3G08650 Solyc01g087540.4 1112 3507 3381 3280 3214 3455 3173 2843 2562 2404 3683 2830 3160 3133 3830 DUF642 domain-containing protein (AHRD V3.3 *** A0A1Q3AUQ6_CEPFO) AT3G08030 Solyc01g087550.3 403 283 347 287 242 250 251 277 288 318 355 310 328 361 521 Cytochrome b5 domain-containing protein RLF (AHRD V3.3 *** A0A2G3AK95_CAPAN) AT5G09680 Solyc01g087560.3 221 638 656 485 802 657 823 933 505 407 568 488 460 451 364 Methyltransferase (AHRD V3.3 *** A0A2G2XST8_CAPBA) AT5G13710 Solyc01g087570.2 122 527 1015 779 541 896 793 478 510 210 799 422 453 753 594 hypothetical protein (AHRD V3.3 *-* AT3G57450.1) AT3G57450 Solyc01g087580.3 67 19 29 9 21 8 3 2 17 11 145 41 18 31 46 hypothetical protein (AHRD V3.3 *-* AT3G57450.1) Solyc01g087590.3 131 372 1661 431 771 661 598 622 372 594 337 337 261 283 285 Polyamine oxidase (AHRD V3.3 *** Q4H439_TOBAC) AT5G13700 Solyc01g087600.3 420 786 700 749 901 902 973 955 823 847 652 879 678 583 739 transmembrane protein%2C putative (DUF288) (AHRD V3.3 *** AT2G41770.1) Solyc01g087610.3 675 722 653 591 894 759 720 861 1087 768 821 943 646 667 714 Alpha-N-acetylglucosaminidase (AHRD V3.3 *** Q9ZR45_TOBAC) AT5G13690 Solyc01g087620.3 722 631 1506 909 683 843 746 584 765 679 1256 688 1112 969 1233 Ubiquitin-like protein 5 (AHRD V3.3 *** A0A1U8DUI9_CAPAN) AT5G42300 Solyc01g087630.2 15 11 24 2 25 14 36 30 11 17 15 24 13 15 19 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *-* F4HQ07_ARATH) Solyc01g087640.3 352 307 325 271 234 217 182 239 324 324 234 230 420 412 464 alcohol dehydrogenase Solyc01g087650.4 1573 1586 1325 1490 1392 1475 1452 1607 1504 1603 1236 1415 1641 1497 1492 Conserved oligomeric Golgi complex subunit 8 (AHRD V3.3 *** K4AYF5_SOLLC) AT5G11980 Solyc01g087660.2 29 10 51 39 17 27 19 16 29 29 38 30 17 34 70 Unknown protein Solyc01g087670.3 2337 2264 1963 1827 1748 1586 1742 1678 1420 1548 1539 1798 2067 2107 2100 WD40 repeat (AHRD V3.3 *** A0A200Q3A4_9MAGN) AT4G04940 Solyc01g087680.4 354 194 192 211 159 108 114 126 214 314 226 282 169 195 241 UPF0114 domain-containing protein (AHRD V3.3 *** A0A1Q3BUG9_CEPFO) AT5G13720 Solyc01g087690.3 3 6 10 13 13 4 4 7 8 1 2 8 0 6 0 RNA polymerase sigma factor sigD, chloroplastic (AHRD V3.3 *** A0A2G2XSP7_CAPBA) AT5G13730 Solyc01g087700.1 0 0 0 1 3 1 6 0 2 1 0 0 0 2 0 Unknown protein Solyc01g087710.2 11 7 22 19 31 9 12 2 15 25 49 38 12 24 0 UPF0114 domain-containing protein (AHRD V3.3 *** A0A1Q3C5D7_CEPFO) AT5G13720 Solyc01g087720.4 4419 2615 2801 2751 2967 3360 3194 2994 2276 2975 2562 3193 2202 2594 2390 Structural maintenance of chromosomes protein 5 (AHRD V3.3 *** A0A2G3AKI3_CAPAN) AT5G15920 Solyc01g087730.4 6578 3189 2528 2698 2425 2342 2253 2368 2580 2640 2627 2248 1668 2465 2852 50S ribosomal protein L1 (AHRD V3.3 *** B2JA75_NOSP7) AT3G63490 Solyc01g087740.1 8 48 36 44 164 140 105 231 72 42 31 150 0 17 2 Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC) AT5G67090 Solyc01g087750.4 283 339 281 479 331 242 222 278 181 263 69 252 271 242 355 protein RETICULATA-RELATED 4, chloroplastic-like (AHRD V3.3 *** A0A2I4G748_9ROSI) Solyc01g087760.2 213 76 159 93 13 18 18 7 80 92 105 65 82 144 93 Subtilisin-like protease (AHRD V3.3 *-* O82777_SOLLC) Solyc01g087770.4 301 137 163 161 25 50 32 26 117 177 161 131 91 161 72 Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC) Solyc01g087780.2 2973 2147 3136 3217 1973 2065 1670 2468 3461 3294 3333 3877 2989 3347 2841 serine protease SBT4A Solyc01g087790.2 215 261 327 215 252 205 185 287 476 289 489 604 169 458 432 Subtilisin-like protease (AHRD V3.3 *** O82006_SOLLC) Solyc01g087800.2 567 200 153 241 6 12 13 24 64 236 348 81 129 285 541 Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC) Solyc01g087810.2 214 175 155 191 147 155 149 143 158 167 154 182 175 246 219 Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC) AT5G67090 Solyc01g087820.2 286 89 77 199 11 4 1 3 42 58 72 38 64 181 558 Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC) AT5G67090 Solyc01g087830.1 1 1 0 11 0 6 0 5 2 0 0 5 0 0 0 Subtilisin-like protease (AHRD V3.3 *-* O82777_SOLLC) Solyc01g087840.3 140 37 21 97 6 3 3 1 18 26 13 2 36 46 336 Subtilisin-like protease (AHRD V3.3 *** O82006_SOLLC) Solyc01g087850.2 710 420 793 1123 184 220 183 198 504 1178 1951 385 584 664 1929 serine protease SBT3 AT5G67090 Solyc01g087860.2 41 38 24 88 20 54 65 44 39 29 79 39 33 29 42 Unknown protein AT1G35430 Solyc01g087870.4 279 320 433 383 272 326 352 342 370 295 253 250 701 509 335 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (AHRD V3.3 *** A0A2I0VLF2_9ASPA) AT3G24090 Solyc01g087880.3 150 399 240 230 287 254 256 193 235 93 251 222 499 379 263 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase (AHRD V3.3 *** AT3G52040.1) AT3G52040 Solyc01g087890.3 1116 927 960 1353 1097 1136 1333 1322 1162 2037 824 1801 593 870 633 Plasma-membrane choline transporter family protein (AHRD V3.3 *** F4K425_ARATH) AT5G13760 Solyc01g087900.3 2071 1751 1540 1604 1400 1514 1334 1613 1551 1190 1677 1387 2367 1647 2011 N-acetyltransferase-like protein (AHRD V3.3 *** A8J3X9_CHLRE) AT5G13780 Solyc01g087910.4 912 561 521 355 331 387 396 395 408 514 463 441 439 408 439 F-box/WD-40 repeat-containing protein (AHRD V3.3 *** A0A1J3H907_NOCCA) AT3G52030 Solyc01g087920.2 0 0 8 0 0 1 0 9 0 1 3 0 0 8 0 Carboxypeptidase (AHRD V3.3 *** A0A2G3AKH5_CAPAN) Solyc01g087940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carboxypeptidase (AHRD V3.3 *-* A0A2G2XQF7_CAPBA) Solyc01g087950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carboxypeptidase (AHRD V3.3 *** A0A2G3AKH5_CAPAN) Solyc01g087960.3 0 2 2 3 4 1 2 3 3 5 0 0 1 0 0 Carboxypeptidase (AHRD V3.3 *** A0A2G3C5U0_CAPCH) Solyc01g087970.3 26 34 65 56 0 11 1 4 50 28 46 2 10 5 25 Carboxypeptidase (AHRD V3.3 *** A0A2G2XQG5_CAPBA) AT3G63470 Solyc01g087980.4 284 146 131 104 21 28 35 30 61 72 793 119 126 87 348 DUF793 domain-containing protein (AHRD V3.3 *** A0A1Q3CNG5_CEPFO) Solyc01g087990.3 145 105 157 95 132 121 107 117 38 93 112 97 164 152 107 MADS-box transcription factor (AHRD V3.3 *** Q75V01_9ASPA) AT5G13790 Solyc01g088000.4 855 511 370 421 476 518 430 427 459 577 296 492 415 407 473 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q8RXT8_ARATH) AT3G60910 Solyc01g088010.1 38 7 7 2 3 1 4 4 6 12 34 7 4 18 51 Lactoylglutathione lyase (AHRD V3.3 *** B6UH06_MAIZE) AT2G28420 Solyc01g088013.1 0 0 5 3 0 0 0 0 0 3 4 0 0 2 0 Unknown protein Solyc01g088017.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kinesin-like protein (AHRD V3.3 *-* A0A2K3P4G4_TRIPR) Solyc01g088020.3 8303 11117 8824 10376 11212 9819 10653 11843 10108 10591 8414 10666 12174 11608 9649 Protein transport protein SEC31-like protein B (AHRD V3.3 *** A0A2G3AKI6_CAPAN) AT3G63460 Solyc01g088030.4 70 64 59 54 61 45 37 44 49 74 69 79 93 62 62 Structure-specific endonuclease subunit slx1 (AHRD V3.3 *** A0A1J3GRL8_NOCCA) AT5G43210 Solyc01g088040.3 720 842 1226 1125 1052 1096 1287 959 892 925 1018 863 1109 1054 1150 Unknown protein Solyc01g088050.3 178 209 178 275 305 312 275 266 235 170 206 199 173 221 163 Serine/threonine-protein kinase-like protein (AHRD V3.3 *** A0A2G2XQK9_CAPBA) AT3G51990 Solyc01g088060.3 224 219 174 171 177 215 219 207 176 202 145 168 160 188 191 NBS-LRR resistance protein (AHRD V3.3 *** A0A2K3NXD2_TRIPR) Solyc01g088080.3 2732 3980 2220 2241 2884 2755 2392 3610 2711 2340 1593 2873 3976 3207 2241 T-complex protein 1 subunit theta (AHRD V3.3 *** A0A1U8F9M6_CAPAN) AT3G03960 Solyc01g088090.3 211 201 136 197 177 185 161 176 277 348 155 253 233 179 218 Pheophytinase, chloroplastic (AHRD V3.3 *** A0A2G3C5T3_CAPCH) AT5G13800 Solyc01g088100.4 6344 6003 5412 6076 6716 6785 6996 7302 6306 4939 5509 5845 5839 6534 5809 Zinc finger transcription factor 12 Solyc01g088105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g088120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g088140.3 1013 899 947 969 1033 971 870 977 933 1088 823 1121 899 950 612 hypothetical protein (AHRD V3.3 *-* AT5G13470.1) AT5G13470 Solyc01g088150.3 333 419 467 369 460 378 404 470 416 384 394 328 436 495 367 Glycerol-3-phosphate dehydrogenase [NAD(+)] (AHRD V3.3 *** A0A1U8F7U7_CAPAN) Solyc01g088160.4 5 11 1 41 0 6 5 5 20 5 3 8 14 28 10 cytokinin oxidase2 AT3G63440 Solyc01g088170.4 1409 1954 1991 1647 1375 1667 1905 1794 2097 1330 1494 1626 1716 1857 1537 aldehyde oxidase 2 AT2G27150 Solyc01g088180.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldehyde oxidase 3 (AHRD V3.3 *-* B0LB01_PEA) Solyc01g088230.3 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldehyde oxidase 3 (AHRD V3.3 *-* B0LB01_PEA) Solyc01g088200.4 7 12 10 9 12 10 7 4 18 8 32 8 9 19 50 aldehyde oxidase 4 pseudogene Solyc01g088220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldehyde oxidase 3 (AHRD V3.3 *-* B0LB01_PEA) Solyc01g088240.4 480 319 459 437 395 408 428 320 366 333 381 331 344 338 495 F-box protein FBW2 (AHRD V3.3 *** A0A2I0XBZ1_9ASPA) Solyc01g088250.4 467 761 797 724 629 688 768 491 1599 417 1608 664 655 857 1646 SUN domain protein3 AT5G13460 Solyc01g088260.3 18 17 16 16 16 10 9 6 3 24 14 10 23 28 24 Germin-like protein subfamily 1 member 20 (AHRD V3.3 *** A0A2G3CSH1_CAPCH) Solyc01g088270.3 5 2 3 0 8 7 0 4 1 2 3 0 10 1 0 Germin-like protein subfamily 1 member 15 (AHRD V3.3 *-* A0A1U8F7T4_CAPAN) Solyc01g088275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Germin-like protein subfamily 1 member (AHRD V3.3 *** A0A2K3P9M9_TRIPR) Solyc01g088290.2 0 0 3 0 0 5 2 0 3 2 9 0 3 2 5 Germin-like protein subfamily 1 member 15 (AHRD V3.3 *** A0A2G2XRZ1_CAPBA) Solyc01g088300.3 329 361 336 158 1001 942 837 1039 787 692 298 314 607 319 126 Germin-like protein subfamily 1 member 15 (AHRD V3.3 *** A0A2G3C5Q2_CAPCH) Solyc01g088310.3 493 938 622 662 943 960 782 1174 789 669 519 808 918 730 577 Geranylgeranyl diphosphate reductase, chloroplastic (AHRD V3.3 *** A0A2G3DH35_CAPCH) Solyc01g088320.2 66 29 60 66 47 94 56 52 25 30 11 24 45 59 32 DUF810 domain-containing protein (AHRD V3.3 *-* A0A1Q3BQC6_CEPFO),Pfam:PF05664 Solyc01g088330.1 14 17 18 20 34 25 26 27 20 17 32 14 33 40 13 protein unc-13 homolog isoform X1 (AHRD V3.3 *-* XP_019066501.1) Solyc01g088340.2 9 6 0 13 0 6 6 13 10 4 0 7 2 12 0 Unknown protein Solyc01g088350.4 142 232 353 294 377 359 402 312 271 247 255 315 282 304 265 NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) (AHRD V3.3 *** Q682I4_ARATH) AT2G44525 Solyc01g088360.4 0 2 3 0 0 0 1 0 0 1 1 0 6 0 0 Amidophosphoribosyltransferase (AHRD V3.3 *** A0A2G3ALZ7_CAPAN) Solyc01g088370.3 3163 4552 3375 2769 3276 3346 3273 3769 3685 2509 2613 2896 4869 4711 3947 Eukaryotic translation initiation factor 3 subunit B (AHRD V3.3 *** A0A1U8E9Z5_CAPAN) AT5G25780 Solyc01g088380.3 97 437 780 536 925 1098 1043 837 505 306 443 575 342 708 261 DNA replication helicase (AHRD V3.3 *** A0A2U1N8T9_ARTAN) AT1G08840 Solyc01g088390.3 102 321 323 271 362 468 413 326 265 164 246 282 251 407 130 Sister chromatid cohesion protein DCC1 (AHRD V3.3 *** A0A2K3PFF6_TRIPR) AT2G44580 Solyc01g088395.1 0 3 0 4 7 4 0 2 1 1 0 1 3 4 0 Unknown protein Solyc01g088400.4 879 2592 3839 4205 1120 1524 1147 1215 3998 3704 2843 2906 2247 3105 1677 ECERIFERUM 1 AT1G02205 Solyc01g088410.3 9 16 0 27 2 0 1 2 2 3 3 0 1 14 3 Fatty acid hydroxylase superfamily (AHRD V3.3 *-* A0A2U1MHC5_ARTAN) Solyc01g088430.4 378 188 386 283 90 97 45 17 230 282 735 226 184 408 252 Fatty acid hydroxylase superfamily (AHRD V3.3 *** A0A2U1L8N4_ARTAN) AT1G02205 Solyc01g088440.2 131 97 47 124 89 63 104 79 118 135 104 126 130 89 154 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LDD8_ARTAN) AT3G30460 Solyc01g088450.2 58 61 102 82 92 79 88 60 70 74 102 66 86 42 70 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LDD8_ARTAN) AT3G30460 Solyc01g088460.3 147 151 116 248 191 127 174 181 113 231 119 210 83 115 94 Unknown protein Solyc01g088470.3 250 252 560 341 348 408 432 317 377 334 468 419 279 349 455 50S ribosomal protein L18 (AHRD V3.3 *** A0A1J3IW82_NOCCA) AT3G20230 Solyc01g088480.3 348 987 846 925 1123 930 995 979 1057 775 758 841 1116 858 785 UMP-CMP kinase (AHRD V3.3 *** A0A2G2XT48_CAPBA),Pfam:PF00406 AT5G26667 Solyc01g088490.3 55 73 97 113 61 83 98 86 60 64 88 103 126 96 61 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8EAI1_CAPAN) AT1G06270 Solyc01g088500.3 14 296 234 200 496 353 388 483 188 94 178 245 100 138 72 Wall-associated receptor kinase galacturonan-binding domain (AHRD V3.3 *** A0A200R1S9_9MAGN) AT3G17350 Solyc01g150146.1 164 551 703 593 809 945 920 735 412 457 705 623 467 592 420 Phosphatidylinositol N-acetylglucosaminyltransferase subunit P (AHRD V3.3 *** A0A2G2XT73_CAPBA) AT2G39445 Solyc01g088520.3 73 128 62 59 158 73 118 263 106 109 53 99 62 69 21 Dynamin-related protein 1E (AHRD V3.3 *-* A0A1U8EK16_CAPAN) Solyc01g088530.2 510 631 794 860 843 896 748 677 612 580 804 668 663 571 744 hypothetical protein (AHRD V3.3 *** AT2G44600.1) AT2G44600 Solyc01g088540.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Unknown protein Solyc01g088550.3 384 252 585 375 192 256 326 218 221 315 295 172 411 348 431 Purine permease (AHRD V3.3 *** A0A2P5FPT3_TREOI),Pfam:PF16913 AT1G44750 Solyc01g088560.3 619 1091 1293 897 1032 1098 1115 1253 866 1149 1027 881 971 869 723 Rab family GTPase (AHRD V3.3 *** A0A1Y1IFP9_KLENI) AT2G44610 Solyc01g088570.3 339 840 1096 884 1277 1064 1174 1117 850 631 991 962 993 836 928 Acyl carrier protein (AHRD V3.3 *** A0A1U8EAL0_CAPAN) AT2G44620 Solyc01g088575.1 0 0 6 0 0 0 0 0 0 0 1 0 0 0 0 Pectinesterase inhibitor (AHRD V3.3 *** A0A2U1KTC1_ARTAN) AT5G46940 Solyc01g088590.5 9 7 5 10 9 11 6 12 7 21 13 11 3 5 6 Pectinesterase inhibitor (AHRD V3.3 *** A0A2U1KTC1_ARTAN) AT5G46940 Solyc01g088600.4 416 936 783 608 866 778 670 892 706 560 569 700 621 569 625 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic (AHRD V3.3 *** A0A2I4EI43_9ROSI) AT2G44640 Solyc01g088610.4 324 1039 937 777 1288 1269 1424 1241 810 562 583 861 1049 1117 673 10 kDa chaperonin (AHRD V3.3 *** A0A2K3N899_TRIPR) AT3G60210 Solyc01g088620.3 43 100 104 109 306 286 301 267 152 56 181 189 71 125 96 Ferredoxin-like protein (AHRD V3.3 *** Q8GYG8_ARATH) AT1G02180 Solyc01g088630.3 72 53 161 124 105 98 89 89 91 130 112 95 92 81 68 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1N3Q0_ARTAN) AT3G60220 Solyc01g088635.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g088640.4 972 354 441 462 367 416 421 332 352 582 483 371 444 414 458 E3 ubiquitin ligase BIG BROTHER-related-like (AHRD V3.3 *-* A0A2I4HNQ7_9ROSI) Solyc01g088650.4 698 603 410 557 517 558 489 588 453 641 484 582 550 563 604 Alpha-1,3-glucosyltransferase (AHRD V3.3 *** A0A2G3DIZ7_CAPCH) AT2G44660 Solyc01g088660.3 2343 1771 2473 2292 2561 2654 2389 2016 1291 1569 2980 1529 2638 2948 5140 FCS-Like Zinc finger 3 (AHRD V3.3 *** FLZ3_ARATH) AT2G44670 Solyc01g088670.3 220 206 148 163 149 160 190 214 232 188 148 236 85 161 121 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2K3NV92_TRIPR) Solyc01g088680.3 150 97 175 122 115 148 167 112 87 101 188 111 75 100 142 Unknown protein Solyc01g088690.3 581 418 652 525 575 451 488 480 440 362 466 435 330 462 607 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1KAY9_ARTAN) AT5G47070 Solyc01g088700.4 4411 6291 4449 4415 5213 5514 5761 6664 7764 5163 4228 5695 5434 6576 4665 Eukaryotic translation initiation factor 4G (AHRD V3.3 *** A0A2G2XT28_CAPBA) AT3G60240 Solyc01g088710.3 444 400 281 260 312 286 281 383 313 420 312 434 303 341 299 metacaspase-1 (AHRD V3.3 *** A0A1U8ED67_CAPAN),Pfam:PF00656 AT1G02170 Solyc01g088720.3 1162 1094 822 1117 960 876 1155 1231 832 1212 754 924 790 872 776 Transcription factor IIIB 90 kDa subunit (AHRD V3.3 *** A0A2G2XT56_CAPBA) AT3G09360 Solyc01g088730.3 485 345 484 334 330 311 310 292 274 292 307 236 418 391 490 DnaJ domain-containing protein (AHRD V3.3 *** A0A2U1Q731_ARTAN) AT5G23590 Solyc01g088740.4 1234 1555 1642 1372 1404 1711 1752 1275 1173 991 1387 1242 1521 1474 1384 Casein kinase II subunit beta (AHRD V3.3 *** A0A328DKK1_9ASTE) Solyc01g088750.3 146 139 134 155 256 168 162 203 132 170 112 175 168 161 107 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XT23_CAPBA) AT1G69290 Solyc01g088760.4 287 96 60 71 15 25 18 8 84 76 45 41 46 82 112 Cytochrome P450 (AHRD V3.3 *** A0A200RC30_9MAGN) Solyc01g088770.3 132 169 180 159 146 174 188 126 165 101 260 134 211 170 225 Cytochrome c oxidase-assembly factor COX23, mitochondrial (AHRD V3.3 *** A0A2G3DIY6_CAPCH) AT1G02160 Solyc01g088780.3 26 132 176 165 224 233 260 196 103 78 65 140 60 100 114 Rac-like GTP binding protein (AHRD V3.3 *** Q9S821_PHYPA) AT2G44690 Solyc01g088790.2 28 55 46 68 43 37 23 28 97 119 79 204 23 102 73 Nucleotide-diphospho-sugar transferase (AHRD V3.3 *** A0A2U1NTE6_ARTAN) AT1G28710 Solyc01g088800.4 1482 1390 1173 1403 1268 1349 1293 1530 1725 1349 1004 1254 1355 1607 1405 RNA binding protein (AHRD V3.3 *-* A0A2K3MUE2_TRIPR) AT2G44710 Solyc01g088810.4 20 28 13 34 31 22 29 8 14 25 50 7 47 24 44 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1MGK0_ARTAN) Solyc01g088820.2 329 243 238 280 275 299 348 315 232 251 181 234 238 277 232 trihelix transcription factor ASIL2-like (AHRD V3.3 *** A0A2I4HF85_9ROSI) AT2G44730 Solyc01g088830.2 4 3 0 1 0 0 1 0 2 5 5 2 8 3 1 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1MGK0_ARTAN) AT5G51160 Solyc01g089840.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamyl-tRNA reductase (AHRD V3.3 *-* A0A2G3AM66_CAPAN) Solyc01g089850.4 50 302 185 180 477 409 418 428 349 140 160 186 135 145 57 cyclinU4_1 AT2G44740 Solyc01g089853.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PNF5_TRIPR) ATMG00240 Solyc01g089857.1 1533 1182 1149 879 684 624 631 636 759 1090 1108 800 1257 1072 1048 histone-lysine N-methyltransferase SETD1B (AHRD V3.3 *-* XP_010325181.1) AT4G24370 Solyc01g089870.3 366 580 433 437 394 405 441 405 506 397 342 462 656 636 449 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8F0K6_CAPAN) AT1G02150 Solyc01g089880.3 167 114 201 108 78 38 39 31 77 239 164 18 256 111 73 PRA1 family protein (AHRD V3.3 *** A0A2G3AMA6_CAPAN) Solyc01g089890.3 474 146 184 76 14 6 14 6 46 259 176 38 443 243 147 PRA1 family protein (AHRD V3.3 *** A0A2G3AMA6_CAPAN) Solyc01g089900.4 278 284 341 320 236 264 292 261 238 183 239 300 235 367 257 Mannosyltransferase (AHRD V3.3 *** A0A1U8EDJ7_CAPAN) AT1G02145 Solyc01g089910.4 526 320 552 274 185 258 142 198 273 504 185 437 276 337 140 Flotillin-like protein (AHRD V3.3 *** A0A2K3NEM2_TRIPR) Solyc01g089915.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g089920.3 0 0 1 5 1 2 0 4 4 2 0 0 4 5 0 Bax inhibitor 1 (AHRD V3.3 *** A0A2G2XLQ4_CAPBA) Solyc01g089930.2 1 6 3 20 21 19 21 20 12 5 3 15 0 8 6 Riboflavin biosynthesis protein PYRR, chloroplastic (AHRD V3.3 *-* A0A1U8G2K3_CAPAN) Solyc01g089940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bax inhibitor-1 like (AHRD V3.3 *-* Q8LAY4_ARATH) Solyc01g089950.3 85 48 153 63 86 70 80 74 59 60 76 54 91 132 133 F-box domain (AHRD V3.3 *-* A0A200QFG4_9MAGN) Solyc01g089960.3 263 335 542 463 358 348 438 337 351 275 442 252 754 509 627 WRKY transcription factor 12 AT2G44745 Solyc01g089970.3 4164 6103 5837 4977 4543 4785 4913 6154 5741 4294 6300 5195 7309 6500 5965 Nucleoside diphosphate kinase (AHRD V3.3 *** A0A1U8EKT2_CAPAN) AT4G09320 Solyc01g089980.4 875 1156 1284 1327 1749 2177 2295 1463 1656 1228 1541 1389 752 1101 1997 ELMO/CED-12 family protein (AHRD V3.3 *** Q8VZ78_ARATH) AT3G60260 Solyc01g089990.3 16 9 11 29 20 28 25 18 23 16 5 19 6 6 0 Major facilitator superfamily protein (AHRD V3.3 *-* A0A2U1LP11_ARTAN) Solyc01g090000.1 0 2 0 2 0 2 1 4 1 0 0 0 2 1 0 Bax inhibitor 1 (AHRD V3.3 *** A0A1U8GP32_CAPAN) Solyc01g090010.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bax inhibitor 1 (AHRD V3.3 *** A0A1U8GP32_CAPAN) Solyc01g090020.3 0 0 2 0 0 1 0 1 0 0 0 0 0 0 0 BAX inhibitor-1 (AHRD V3.3 --* R9VYW4_CUCSA) Solyc01g090030.2 6 0 1 0 0 1 1 2 3 0 7 0 0 0 2 Bax inhibitor 1 (AHRD V3.3 *** Q93XB9_TOBAC) Solyc01g090040.3 147 71 81 82 114 116 146 110 98 82 62 142 68 70 44 serine/threonine-protein kinase ATG1c isoform X2 (AHRD V3.3 --* XP_010325831.1) Solyc01g090050.4 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 bax inhibitor 1-like isoform X2 (AHRD V3.3 *-* XP_025887342.1) Solyc01g090060.1 0 0 0 0 0 2 4 0 1 0 0 1 0 0 0 Unknown protein Solyc01g090070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BAX inhibitor-1 (AHRD V3.3 *** R9VYW4_CUCSA) Solyc01g090080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bax inhibitor 1 (AHRD V3.3 *** A0A2G2XLQ4_CAPBA) Solyc01g090090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bax inhibitor 1 (AHRD V3.3 -** S8EN25_9LAMI) Solyc01g090100.3 0 1 1 1 5 2 7 4 3 3 0 8 0 1 0 bax inhibitor 1-like (AHRD V3.3 *** XP_010325286.1) Solyc01g090110.2 0 2 0 0 0 1 3 2 0 3 0 3 0 0 0 Bax inhibitor 1 (AHRD V3.3 *** A0A1U8GP32_CAPAN) Solyc01g090120.3 13 139 121 265 125 119 104 82 88 262 225 132 40 138 413 Uclacyanin-3 (AHRD V3.3 *** A0A1U8ED46_CAPAN) AT3G60280 Solyc01g090130.3 22 4 7 1 4 2 1 0 1 2 9 4 3 0 11 Pectinesterase (AHRD V3.3 *-* A0A1U8EP37_CAPAN) Solyc01g090140.3 4 3 0 0 0 0 0 0 0 2 0 0 0 0 1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* F4IV21_ARATH) Solyc01g090150.1 7 1 5 3 0 5 8 3 0 0 10 3 0 1 1 Unknown protein Solyc01g090160.4 72 24 36 48 29 65 39 52 53 41 58 39 33 60 87 Unknown protein Solyc01g090170.4 2024 1595 2169 1688 1439 1606 1496 1488 1528 1731 1580 1473 1980 1580 1669 Ras-related small GTP-binding protein (AHRD V3.3 *** A0A1Y0K2B8_9ROSI) Solyc01g090180.4 71 578 385 660 1929 1780 1830 1544 754 867 525 1147 315 548 207 4,5-DOPA dioxygenase extradiol (AHRD V3.3 *** A0A1U8ED16_CAPAN) AT4G15093 Solyc01g090190.3 4068 4158 3035 3089 4459 3635 3443 4074 4396 3359 2904 3568 4665 3787 2724 Nuclear RNA binding protein (AHRD V3.3 *** C7TPG6_SOLTU) AT4G16830 Solyc01g090200.4 1267 1147 1330 1249 1277 1383 1609 1160 1184 994 1211 1124 969 1389 1415 Glycine-tRNA ligase (AHRD V3.3 *** A0A2U1L4F3_ARTAN) AT3G48110 Solyc01g090210.4 58 70 146 88 127 112 128 87 124 104 152 99 101 105 118 U-box domain-containing protein 35 (AHRD V3.3 *** A0A2I4F8Y4_9ROSI) AT5G47740 Solyc01g090220.4 724 716 776 693 605 730 745 658 677 632 879 663 708 862 1114 Phospholipase A1 (AHRD V3.3 *-* A4ZX88_BRACM) Solyc01g090230.3 1334 820 692 845 758 777 778 826 1056 1171 892 835 697 657 1014 GRAM domain family protein (AHRD V3.3 *** A0A2U1KYE4_ARTAN) AT1G02120 Solyc01g090240.3 766 1210 1323 1088 1315 1573 1535 1556 1398 997 1039 1468 1138 1366 1041 AvrPto-dependent Pto-interacting protein 3 AT2G44830 Solyc01g090260.5.1 843 652 583 873 532 607 614 571 545 563 548 569 493 638 669 ARM repeat superfamily protein (AHRD V3.3 *** AT3G08800.1) AT3G08800 Solyc01g090270.4 1586 2018 2387 2819 2568 2229 2416 2517 3100 2699 2527 2614 1852 2120 2181 DUF632 domain-containing protein/DUF630 domain-containing protein (AHRD V3.3 *** A0A1Q3CQQ2_CEPFO) AT3G60320 Solyc01g090280.4 700 636 673 554 622 606 681 649 487 580 468 540 684 709 615 Leucine carboxyl methyltransferase 1 homolog (AHRD V3.3 *** A0A2G2XS18_CAPBA) AT1G02100 Solyc01g090290.4 501 838 676 660 821 914 952 803 760 567 711 697 926 907 801 COP9 signalosome complex subunit 7 (AHRD V3.3 *** A0A1U8ECL6_CAPAN) AT1G02090 Solyc01g090300.2 1 3 19 9 4 8 15 3 14 16 50 28 5 2 0 Ethylene-responsive transcription factor 2 (AHRD V3.3 *** A0A2G3DF02_CAPCH) Solyc01g090310.3 0 0 149 1 0 0 0 1 18 37 286 18 4 0 13 Ethylene-responsive transcription factor 13 (AHRD V3.3 *** A0A2G2XMR4_CAPBA) Solyc01g090320.4 0 5 12 0 0 0 0 0 9 13 73 3 1 5 0 Unknown protein Solyc01g090340.3 687 1980 424 2167 2148 2128 1651 1562 2536 2203 1440 3149 2024 1722 1459 Ethylene-responsive transcription factor 2 (AHRD V3.3 *** A0A2G3DEZ8_CAPCH) Solyc01g090345.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor 2 (AHRD V3.3 *** A0A2G3DEZ9_CAPCH) Solyc01g090350.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** K4AYX6_SOLLC) AT4G33355 Solyc01g090360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** K4AYX7_SOLLC) AT4G33355 Solyc01g090370.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor 13 (AHRD V3.3 *** A0A2G2XN61_CAPBA) Solyc01g090380.3 211 161 293 222 185 181 151 89 132 166 164 131 164 138 212 hypothetical protein (AHRD V3.3 *** AT2G44850.3) AT2G44850 Solyc01g090390.1 56 83 113 57 50 70 50 69 82 81 54 59 45 83 40 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8ECB4_CAPAN) AT2G44880 Solyc01g090410.3 22 31 18 63 25 62 45 38 109 92 68 161 37 70 50 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KLU2_ARTAN) Solyc01g090420.4 1352 1213 961 1094 924 1018 1144 959 952 1076 1005 996 1054 1213 1120 Protein ARABIDILLO 1 (AHRD V3.3 *** A0A2G3DEY3_CAPCH) AT2G44900 Solyc01g090430.3 990 601 953 644 405 381 380 396 596 873 932 496 1017 569 569 NRC1 Solyc01g090440.2 178 487 563 669 1087 1026 1016 1058 932 661 600 840 343 504 536 cotton fiber protein (AHRD V3.3 *-* AT3G60380.1) AT3G60380 Solyc01g090450.3 126 213 176 183 250 245 252 222 219 177 248 248 209 198 152 Actin-related protein 2/3 complex subunit 5 (AHRD V3.3 *** A0A1U8EEJ8_CAPAN) AT4G01710 Solyc01g090460.3 2155 837 933 1079 498 612 532 580 1021 1139 1191 1059 800 979 1133 HD-ZIP Solyc01g090470.3 967 828 718 583 650 520 632 612 680 544 552 493 930 860 876 rRNA processing protein-like protein (AHRD V3.3 *** A0A1P8BD18_ARATH) AT5G61330 Solyc01g090480.4 4158 2589 2190 2608 1700 2135 2205 1726 1709 2127 2177 1918 2065 2272 2469 RNA-binding KH domain-containing protein PEPPER-like (AHRD V3.3 *** A0A2I4EJW1_9ROSI) Solyc01g090490.1 143 141 138 198 161 142 166 209 156 137 162 167 130 173 105 transcription termination factor MTEF18, mitochondrial (AHRD V3.3 *** A0A2I4HDY9_9ROSI) AT3G60400 Solyc01g090500.4 558 393 663 443 525 503 476 360 398 385 611 376 529 444 629 StAR lipid transfer-like protein (AHRD V3.3 *** AT3G60480.1) AT3G60480 Solyc01g090510.2 45 59 55 56 58 35 32 35 40 29 38 50 64 62 59 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QT61_9MAGN) AT3G25970 Solyc01g090515.1 26 52 29 56 43 25 45 20 32 8 36 41 44 41 25 Unknown protein Solyc01g090520.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g090523.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g090527.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g090530.3 32 31 208 101 145 180 109 100 41 61 50 133 31 75 63 R2R3MYB transcription factor 104 AT3G60460 Solyc01g090540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g090550.3 1107 698 1035 840 940 834 848 766 1121 780 1021 778 871 888 1339 DnaJ protein like (AHRD V3.3 *** A0A2I0VGE3_9ASPA) Solyc01g090560.4 222 405 273 463 569 650 531 510 520 625 645 672 498 451 609 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3DJ78_CAPCH) AT2G44940 Solyc01g090590.3 1060 574 607 578 298 406 390 325 433 628 539 524 674 654 675 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1P0W9_ARTAN) AT2G44970 Solyc01g090600.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chalcone synthase (AHRD V3.3 *** A0A2U1NKH0_ARTAN) Solyc01g090610.3 0 0 0 0 3 3 1 1 0 0 0 1 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9C938_ARATH) Solyc01g090630.4 0 0 0 0 11 3 4 5 0 0 15 4 0 2 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9C938_ARATH) Solyc01g090650.1 666 460 315 299 216 194 243 203 194 387 262 271 451 423 242 SNF2 domain-containing protein / helicase domain-containing protein (AHRD V3.3 *** A0A1P8AXX5_ARATH) AT2G44980 Solyc01g090660.3 0 1 0 0 9 0 0 0 0 0 0 0 0 0 0 carotenoid cleavage dioxygenase7 AT2G44990 Solyc01g090670.3 3170 4257 2130 3147 3970 2950 3118 4467 2652 3904 1721 3896 2947 2946 1797 nuclear pore complex protein NUP62 (AHRD V3.3 *-* A0A2I4GEZ1_9ROSI) AT2G45000 Solyc01g090680.3 1054 339 481 393 99 144 148 103 274 498 682 166 368 484 823 Uncharacterized conserved protein (UCP012943) (AHRD V3.3 *** AT4G25170.1) Solyc01g090690.4 2890 2109 1194 1254 1064 903 980 1198 1474 1585 986 1409 1910 1972 1277 Elongation factor G, mitochondrial (AHRD V3.3 *** A0A1U8EDZ1_CAPAN) AT2G45030 Solyc01g090693.1 772 564 826 691 649 584 679 494 704 446 771 515 601 787 888 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial (AHRD V3.3 *** A0A1U8EBI0_CAPAN) AT3G60510 Solyc01g090697.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial (AHRD V3.3 *** A0A1U8EBI0_CAPAN) AT3G60510 Solyc01g090710.3 20 35 103 63 47 60 47 34 47 60 135 39 23 34 62 cytosolic malate dehydrogenase Solyc01g090720.3 360 279 328 266 257 235 297 222 209 239 237 175 333 294 351 P53/DNA damage-regulated protein (AHRD V3.3 *** AT3G15351.5) AT3G15351 Solyc01g090730.3 442 1588 1843 1789 1265 1013 1095 1315 3501 2092 1977 2231 1519 1114 426 Squamosa promoter binding protein 8b AT1G02065 Solyc01g090740.3 996 499 206 278 94 113 129 62 177 502 298 274 271 318 296 zinc ion-binding protein (AHRD V3.3 *** AT3G60520.1) AT1G02070 Solyc01g090750.3 2526 3767 3604 3324 3751 4113 4144 3809 2612 2451 2762 3004 4517 3967 3426 T-complex protein 1 subunit alpha (AHRD V3.3 *** A0A2G3DJ65_CAPCH) AT3G20050 Solyc01g090760.4 775 361 867 544 513 484 583 387 264 859 510 678 88 264 324 GATA transcription factor (AHRD V3.3 *** K4AZ17_SOLLC) AT2G45050 Solyc01g090770.4 644 882 835 742 957 925 862 906 864 760 826 809 1064 1069 1042 alanine-tRNA ligase (AHRD V3.3 *** AT2G45060.1) AT2G45060 Solyc01g090780.3 5790 4130 2918 3561 2956 2966 3206 3215 3728 3838 2500 3432 3330 3971 3388 CCR4-NOT transcription complex subunit 1 (AHRD V3.3 *** A0A1J3I902_NOCCA) AT1G02080 Solyc01g090790.4 3788 3210 504 1434 2016 2025 2442 2081 1366 2641 405 1950 2043 740 1170 bHLH transcription factor AT4G00050 Solyc01g090800.3 8 117 102 150 166 179 182 167 175 146 59 52 264 113 55 cyclinU2_1 AT2G45080 Solyc01g090810.4 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 beta-expansin precursor AT1G65680 Solyc01g090820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Expansin-B15 (AHRD V3.3 *** A0A1U8ELM2_CAPAN) Solyc01g090830.2 0 1 1 4 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein ZAT3 (AHRD V3.3 *** A0A1U8ENB0_CAPAN) AT1G02040 Solyc01g090840.3 212 95 102 74 24 29 24 37 81 71 51 81 111 83 156 Zinc finger protein (AHRD V3.3 *** A0A200PXY0_9MAGN) AT3G60580 Solyc01g090850.3 1344 1337 1298 1312 1248 1246 1202 1722 1231 1500 1330 1512 1363 1338 1223 Zf-met domain-containing protein (AHRD V3.3 *-* A0A1Q3B1Z8_CEPFO) Solyc01g090860.3 1714 1425 1406 1670 1497 1549 1712 1504 1632 1448 1472 1386 1126 1451 1765 Non-canonical poly(A) RNA polymerase PAPD7 (AHRD V3.3 *-* A0A1J3H7W2_NOCCA) AT4G00060 Solyc01g090870.1 0 6 1 9 1 7 7 9 6 8 0 1 1 1 2 Transcription repressor OFP17 (AHRD V3.3 *** A0A2G2XV47_CAPAN) AT2G30395 Solyc01g090880.3 933 568 646 552 480 686 602 453 602 519 550 621 441 499 859 Holliday junction resolvase (AHRD V3.3 *** B6TEN1_MAIZE) AT1G12244 Solyc01g090890.3 0 13 3 4 0 2 0 1 2 3 2 5 0 0 6 SPX domain-containing protein (AHRD V3.3 *** A0A1Q3B249_CEPFO) AT2G45130 Solyc01g090900.3 212 255 300 268 204 223 239 176 258 298 270 228 372 276 247 cytochrome P450 family protein (AHRD V3.3 *** AT3G60590.3) AT3G60590 Solyc01g090910.3 1393 1209 1147 772 1220 1181 1118 1104 939 1139 1225 833 1333 954 1076 Vesicle-associated protein 1-1 (AHRD V3.3 *** A0A1J3D959_NOCCA) AT3G60600 Solyc01g090920.3 106 117 104 72 48 65 65 56 67 43 77 69 98 105 104 Calmodulin-related protein (AHRD V3.3 *-* A0A2U1L7U0_ARTAN) AT1G73440 Solyc01g090940.3 455 406 466 491 422 443 442 365 444 485 542 396 347 409 557 Phosphatidate cytidylyltransferase (AHRD V3.3 *** A0A2G2XTA5_CAPBA),Pfam:PF01148 AT2G45150 Solyc01g090950.4 1979 2069 2565 2524 3856 3515 3588 3657 2004 2008 1994 2587 2280 2477 1971 Transcription factor GRAS (AHRD V3.3 *-* A0A2U1PW81_ARTAN) AT4G00150 Solyc01g090960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g090965.1 15 265 24 126 438 544 594 323 92 57 24 48 67 25 55 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** Q9FJS1_ARATH) AT4G00165 Solyc01g090980.1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 hypothetical protein (AHRD V3.3 *-* AT2G35736.2) Solyc01g090990.3 208 335 291 278 295 357 323 327 364 260 335 365 486 327 355 Vesicle-associated protein 1-1 (AHRD V3.3 *** A0A2G3DJD8_CAPCH) AT4G00170 Solyc01g091000.4 1725 725 424 488 455 503 426 516 409 806 353 619 649 632 586 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1N4W8_ARTAN) AT3G60670 Solyc01g091010.3 3193 2544 3442 5783 3250 3788 2402 4218 1795 4177 1946 6501 1494 3281 882 CRABS CLAW-like protein1a AT2G45190 Solyc01g091020.3 672 868 1092 1293 1080 1329 1210 957 833 814 1396 944 1196 1075 1176 Golgi SNAP receptor complex member 1 (AHRD V3.3 *** A0A2G3BCT5_CAPCH) AT2G45200 Solyc01g091030.3 604 225 186 263 64 49 51 42 86 143 136 152 406 232 184 Small auxin up-regulated RNA1 AT2G45210 Solyc01g091040.3 314 712 618 632 911 714 750 775 470 326 552 367 589 584 576 Cysteine-rich repeat secretory protein 15 (AHRD V3.3 *** A0A2G2XNS3_CAPBA) AT3G60720 Solyc01g091050.4 1332 869 462 544 98 71 32 40 552 2422 1162 470 253 306 373 Pectinesterase (AHRD V3.3 *** A0A2G2XP44_CAPBA) AT2G45220 Solyc01g091060.2 17 0 1 5 0 1 1 0 4 0 9 2 2 6 6 Pectinesterase (AHRD V3.3 *** A0A2G3BCT8_CAPCH) Solyc01g091070.3 2200 1723 1388 1318 1112 1040 1122 1151 1151 1308 1283 1224 1992 1770 1522 Methionine aminopeptidase (AHRD V3.3 *** A0A2G2XNQ4_CAPBA) AT2G45240 Solyc01g091080.3 563 984 1145 1094 1262 1733 1681 1262 849 553 849 926 1009 1057 976 tubulin-folding cofactor D (AHRD V3.3 *** A0A2I4EM28_9ROSI) AT3G60740 Solyc01g091090.4 66 170 116 87 250 210 209 296 184 123 70 177 132 166 117 Tubulin-folding cofactor D (AHRD V3.3 *-* A0A2G2XNQ5_CAPBA) Solyc01g091100.2 7 1 0 0 0 0 0 0 0 1 0 0 0 3 0 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A061G797_THECC) Solyc01g091110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant invertase/pectin methylesterase inhibitor (AHRD V3.3 *** G7IYJ3_MEDTR) Solyc01g091120.3 3189 3373 2818 2844 3972 3848 3300 4289 3049 3111 2590 3191 3589 3210 2576 DUF641 domain-containing protein (AHRD V3.3 *** A0A1Q3CEI9_CEPFO) AT2G45260 Solyc01g091130.4 482 287 358 284 310 293 304 324 337 275 201 339 340 316 154 Nitroreductase family protein (AHRD V3.3 *** A0A2K3NXL4_TRIPR) AT1G02020 Solyc01g091140.4 66 86 64 156 234 190 204 229 116 90 76 121 55 133 92 Nitroreductase family protein (AHRD V3.3 *** A0A2K3NXL4_TRIPR) Solyc01g150147.1 6 12 15 10 17 28 33 27 13 18 4 25 13 12 23 Golgi SNAP receptor complex member 1 (AHRD V3.3 *-* A0A1U8EGS6_CAPAN) Solyc01g091160.4 628 342 255 226 196 184 182 217 198 243 168 250 356 412 269 arginase 1 AT4G08900 Solyc01g091170.3 234 661 553 478 463 653 546 592 5158 2397 2125 3335 726 886 290 ARGINASE 2 AT4G08900 Solyc01g091180.4 28 62 125 180 107 98 136 95 173 48 83 76 118 178 119 Protein NRT1/ PTR FAMILY 7.3 (AHRD V3.3 *** A0A2G2XNQ7_CAPBA) Solyc01g091190.3 814 2501 1725 1705 2549 2454 2401 2659 2288 1674 1444 2027 2598 2479 1638 5-enolpyruvylshikimate-3-phosphate synthase AT2G45300 Solyc01g091200.4 263 1087 963 983 1313 1363 1287 1357 1070 696 694 817 731 880 521 UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** A0A1J3F7T2_NOCCA) AT4G00110 Solyc01g091210.3 261 219 199 291 232 235 273 263 250 213 181 189 272 246 172 RNA 2'-phosphotransferase, Tpt1 / KptA family (AHRD V3.3 *** F4IW52_ARATH) AT2G45330 Solyc01g091220.3 1635 3549 3706 2630 3805 3800 3775 3507 2421 1865 3112 2518 4152 3768 3091 40S ribosomal protein S13 (AHRD V3.3 *** A0A2I0WN36_9ASPA) AT4G00100 Solyc01g091230.3 509 2610 2909 2892 7158 7134 6841 7003 4228 1827 4326 5209 2152 2736 1802 Receptor-like kinase (AHRD V3.3 *** A0A191UPW4_CASSA) AT2G45340 Solyc01g091240.4 76 135 149 180 334 264 217 318 185 165 108 255 136 153 136 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G3DDW2_CAPCH) AT2G45350 Solyc01g091250.3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 1 DUF1442 domain-containing protein (AHRD V3.3 *** A0A1Q3BAQ3_CEPFO) Solyc01g091260.3 476 330 282 347 373 343 387 226 334 112 131 287 337 230 134 myeloid leukemia factor (AHRD V3.3 *** AT2G45380.4) Solyc01g091270.3 554 405 355 281 307 304 250 293 298 250 266 276 352 412 437 myeloid leukemia factor (AHRD V3.3 *** AT2G45380.4) AT2G45380 Solyc01g091280.3 655 597 595 606 606 649 665 592 609 648 647 616 653 586 753 S-acyltransferase (AHRD V3.3 *** A0A1U8GVQ8_CAPAN) AT3G60800 Solyc01g091290.4 0 0 0 2 0 2 3 2 3 0 0 1 0 0 2 Sec1-like protein (AHRD V3.3 *-* A0A200QIG0_9MAGN) Solyc01g091300.3 2 7 11 8 7 13 10 8 24 4 20 20 8 7 7 Secretory 1A (AHRD V3.3 *** A0A1P8AMM7_ARATH) Solyc01g091310.3 795 965 847 693 834 693 590 806 855 705 617 763 1105 1006 824 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1L635_ARTAN) AT4G00090 Solyc01g091320.3 474 5471 2111 4387 6082 6439 5353 5093 9019 7586 9808 11058 3838 4307 3021 Methylsterol monooxygenase 1-2 (AHRD V3.3 *** A0A1U8H2N7_CAPAN) Solyc01g091330.4 55 144 71 101 109 163 159 184 111 169 130 144 154 123 48 Glutathione S-transferase (AHRD V3.3 *** A0A200QB36_9MAGN) Solyc01g091340.3 183 419 419 314 378 519 464 389 376 182 281 308 503 575 303 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G3AH66_CAPAN) AT3G12340 Solyc01g091350.4 765 680 613 557 677 571 589 744 566 659 628 696 717 714 568 ATP-dependent DNA helicase 2 subunit KU80 (AHRD V3.3 *** A0A2G3AH96_CAPAN) AT1G48050 Solyc01g091360.4 49 116 233 146 282 297 228 269 175 217 227 233 53 103 189 DUF1499 family protein (AHRD V3.3 *** AT3G60810.1) AT3G60810 Solyc01g091370.4 885 1488 2345 1893 1488 1466 1256 1476 1857 1249 1710 1980 1824 2161 1796 AT-hook motif nuclear-localized protein 1 (AHRD V3.3 *** A0A2G3AH71_CAPAN) Solyc01g091380.4 327 380 466 636 458 580 523 486 477 419 529 441 306 401 436 65-kDa microtubule-associated protein 9 (AHRD V3.3 *** A0A2G2XNT4_CAPBA),Pfam:PF03999 Solyc01g091390.2 875 806 797 926 893 706 655 961 976 1030 616 786 757 737 585 hypothetical protein (AHRD V3.3 *** AT3G60850.1) AT3G60850 Solyc01g091400.3 228 166 260 139 200 223 168 182 112 273 160 296 151 116 110 LOB domain-containing protein 31 (AHRD V3.3 *** A0A2G3DDY2_CAPCH) Solyc01g091410.3 0 0 0 0 2 3 2 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1N3W1_ARTAN) AT2G45610 Solyc01g091420.2 21 34 38 56 121 85 105 122 32 65 141 32 96 30 59 LOB domain-containing protein 18 (AHRD V3.3 *** A0A2G3DE12_CAPCH) AT2G45420 Solyc01g091430.2 48 27 25 43 18 18 47 13 13 14 47 8 14 33 22 ATP-dependent DNA helicase 2 subunit KU80 (AHRD V3.3 *-* A0A2G3AH96_CAPAN) Solyc01g091440.4 47 13 22 12 11 14 13 4 20 4 21 20 12 9 9 ATP-dependent DNA helicase 2 subunit KU80 (AHRD V3.3 *-* A0A2G2XNV2_CAPBA) Solyc01g091450.3 97 149 100 130 153 140 122 158 124 94 86 137 122 100 103 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XNT7_CAPBA) AT1G01970 Solyc01g091460.3 2137 3217 3100 3261 3773 3709 4122 4348 4148 3250 2998 3283 3190 3647 3187 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 (AHRD V3.3 *** A0A2G2XNT6_CAPBA) AT3G60860 Solyc01g091470.3 42 61 66 52 40 24 23 49 46 82 106 13 107 49 55 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2G3DDW3_CAPCH) Solyc01g091480.4 437 782 861 748 1071 1225 1342 1174 838 698 928 715 497 703 752 Kinesin-like protein (AHRD V3.3 *** K4AZ88_SOLLC) AT1G01950 Solyc01g091490.3 131 66 126 104 104 61 69 75 55 64 129 58 204 94 62 Unknown protein AT3G60890 Solyc01g091500.3 1155 1029 870 716 764 711 766 709 934 746 838 826 797 944 949 SMAD/FHA domain protein (AHRD V3.3 *** A0A2K3NM18_TRIPR) AT2G45460 Solyc01g091510.4 923 699 667 574 542 515 465 496 615 618 543 509 665 599 566 ankyrin repeat and zinc finger domain-containing protein 1 (AHRD V3.3 *** A0A2I4GRZ6_9ROSI) AT1G01930 Solyc01g091520.3 3417 2859 2364 3387 3910 2972 2662 3242 2631 3653 2871 2784 2978 2264 2712 Enoyl-CoA delta isomerase 1, peroxisomal (AHRD V3.3 *** A0A2G3DDW4_CAPCH) AT1G65520 Solyc01g091530.4 4117 14102 12613 12023 20248 18873 18591 21836 14226 12475 14119 13705 10374 8983 7388 Fasciclin-like arabinogalactan protein (AHRD V3.3 *** E3WHD6_9ROSI) AT3G60900 Solyc01g091540.3 1163 936 641 560 627 565 485 562 503 579 479 732 830 770 267 Growth-regulating factor 10 (AHRD V3.3 *** A0A2G3AGX2_CAPAN) AT2G45480 Solyc01g091550.3 612 386 433 437 546 494 596 534 459 431 419 500 386 407 358 Thioesterase superfamily (AHRD V3.3 *** A0A200QUL3_9MAGN) AT3G61200 Solyc01g091560.2 3 3 0 8 3 6 2 13 7 12 21 15 7 10 1 Thioesterase superfamily (AHRD V3.3 *** A0A200QUL3_9MAGN) AT3G61200 Solyc01g091570.3 395 239 347 302 163 143 162 142 184 258 228 140 382 261 307 Thioesterase superfamily (AHRD V3.3 *** A0A200QUL3_9MAGN) AT3G61200 Solyc01g091580.3 414 439 332 319 459 423 395 456 374 308 328 345 399 439 401 Signal recognition particle receptor FtsY (AHRD V3.3 *** E0RG96_PAEP6) AT2G45770 Solyc01g091590.3 419 194 504 36 1 2 3 2 11 24 1009 195 166 130 286 BON1-associated protein 2-like (AHRD V3.3 *** A0A2I4E3A5_9ROSI) AT2G45760 Solyc01g091600.4 510 321 313 269 231 280 253 233 292 431 322 347 377 329 358 RING/U-box superfamily protein (AHRD V3.3 *** Q93YQ5_ARATH) AT1G12760 Solyc01g091610.1 57 51 59 33 55 76 53 36 56 32 66 27 33 78 113 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0X2S8_9ASPA) AT3G61170 Solyc01g091620.3 5753 5388 6487 6200 6216 6727 5979 7224 5412 7381 5059 7344 4303 5134 4303 Shaggy-related protein kinase theta (AHRD V3.3 *** A0A2G2XNW0_CAPBA) AT4G00720 Solyc01g091630.3 2505 2441 2705 2402 1416 1628 1619 1513 2533 1870 2427 1899 1417 2016 2451 cutin deficient 2 AT4G00730 Solyc01g091640.3 691 1215 1123 1289 1654 1529 1435 1676 1475 1403 1126 1459 1174 1127 946 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MZF9_ARTAN) AT4G00740 Solyc01g091650.3 1395 2161 1626 1708 1862 1744 1619 1703 1723 1212 1406 1309 2568 2293 1686 COP9 signalosome complex subunit 1 (AHRD V3.3 *** A0A2G3AGT2_CAPAN) AT3G61140 Solyc01g091660.3 0 8 25 23 39 16 20 14 10 6 9 10 0 7 15 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1QER6_ARTAN),Pfam:PF13561 AT2G47140 Solyc01g091670.3 47 24 61 47 28 14 10 12 30 32 128 42 23 38 31 3-oxo-Delta(4,5)-steroid 5-beta-reductase (AHRD V3.3 *** A0A2G3DDY0_CAPCH) Solyc01g091690.3 46 135 82 77 55 46 33 61 81 99 83 53 77 74 60 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1NM08_ARTAN) AT4G00750 Solyc01g091700.4 565 135 135 163 168 146 204 170 99 550 175 181 73 60 66 F-box protein PP2-A15 (AHRD V3.3 *** A0A2G3DE53_CAPCH) AT3G61060 Solyc01g091710.4 503 461 469 385 543 533 512 553 398 466 378 504 439 397 303 F-box family protein (AHRD V3.3 *** A0A2U1QK66_ARTAN) Solyc01g091720.3 641 336 285 296 270 281 260 248 293 321 335 231 290 291 226 F-box family protein (AHRD V3.3 *** A0A2U1QK66_ARTAN) Solyc01g091730.3 4515 2777 2797 2685 2561 2097 2193 2570 3026 3594 2413 2522 2991 2904 2410 Peroxisomal membrane protein 11E (AHRD V3.3 *** A0A1U8GV12_CAPAN) AT2G45740 Solyc01g091740.4 273 460 497 534 729 761 695 757 526 485 541 563 270 300 289 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1QPK4_ARTAN) AT2G45720 Solyc01g091750.3 1175 1119 1141 1044 1210 1150 1131 1113 1036 866 1215 1098 1274 1162 1212 Arginine/serine-rich-splicing factor (AHRD V3.3 *-* G5DW02_SILLA) Solyc01g091760.3 1 1 0 2 0 0 0 0 2 1 0 0 1 7 0 Ethylene-responsive transcription factor 1 (AHRD V3.3 *** A0A2G3DE29_CAPCH) Solyc01g091770.4 201 165 268 201 198 235 216 165 162 165 239 165 217 163 315 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LC40_ARTAN) Solyc01g091780.4 618 466 695 607 504 483 636 467 580 516 749 566 458 496 679 Protein-ribulosamine 3-kinase, chloroplastic (AHRD V3.3 *** A0A2G2W3U1_CAPBA) AT3G61080 Solyc01g091790.2 305 358 543 754 491 459 479 432 335 493 546 602 439 515 464 AP2-like ethylene-responsive transcription factor SNZ (AHRD V3.3 *** AT1G01840.1) AT1G01840 Solyc01g091800.3 650 791 916 899 1196 1242 1386 1176 829 574 774 913 716 981 862 Ribosomal RNA small subunit methyltransferase A (AHRD V3.3 *** F4FS23_LACBN) AT1G01860 Solyc01g091810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *** E4MXH5_EUTHA) Solyc01g091820.3 379 311 254 361 392 408 405 363 313 317 300 346 275 294 385 Flap endonuclease GEN-like 1 (AHRD V3.3 *** A0A2G2W3T5_CAPBA) AT1G01880 Solyc01g091830.3 106 224 120 83 111 84 105 99 1149 310 700 367 388 149 107 hypothetical protein (AHRD V3.3 *** AT4G23020.2) AT4G00770 Solyc01g091840.4 329 260 313 124 76 69 81 43 123 269 190 99 371 208 128 UDP-galactose/UDP-glucose transporter 2 (AHRD V3.3 *** A0A2G3DE09_CAPCH) AT1G12600 Solyc01g091850.3 109 98 199 146 124 89 127 137 198 158 241 271 104 95 206 Ccc1 family (AHRD V3.3 *** A0A2U1QPJ4_ARTAN) Solyc01g091860.4 794 658 565 600 626 579 719 641 645 587 548 614 635 680 661 SET domain-containing protein (AHRD V3.3 *** A0A2U1QPR8_ARTAN) AT1G01920 Solyc01g091865.1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g091870.3 14 5 0 24 0 1 0 0 4 4 0 0 0 0 9 SPX domain-containing protein (AHRD V3.3 *** D7MDY2_ARALL) Solyc01g091880.3 613 683 536 440 435 410 468 464 510 562 345 419 681 541 515 ATPase (AHRD V3.3 *** A0A1U8GU61_CAPAN) AT1G01910 Solyc01g091890.3 301 268 377 319 271 269 257 304 272 251 323 283 294 244 313 Ubiquitin-related modifier 1 homolog (AHRD V3.3 *** A0A2G3DDZ7_CAPCH) AT2G45695 Solyc01g091900.3 469 264 404 274 205 217 228 218 258 300 284 264 277 331 412 Peroxisomal membrane protein PEX16 (AHRD V3.3 *** A0A2G2W3T2_CAPBA) AT2G45690 Solyc01g091910.4 490 890 1269 904 946 897 1051 1140 986 1033 1113 819 768 1000 793 phospholipase PLDb2 AT2G42010 Solyc01g091920.2 38 171 138 300 190 159 178 167 428 91 157 212 283 265 282 Subtilisin-like protease-like protein (AHRD V3.3 *** A0A2K3L9Q1_TRIPR) AT1G01900 Solyc01g091930.3 16 37 92 78 97 115 151 59 35 21 53 58 20 28 110 Subtilisin-like protease SBT4.14 (AHRD V3.3 *** A0A2G3AGX3_CAPAN) AT4G00230 Solyc01g091940.3 294 304 326 341 277 324 354 262 250 277 357 284 328 360 259 CRS2-associated factor 1, mitochondrial (AHRD V3.3 *** A0A2G2W3S2_CAPBA) AT4G31010 Solyc01g091950.4 3210 1373 806 1207 755 740 773 834 989 2201 969 996 813 1078 2070 Lysophospholipid acyltransferase LPEAT2 (AHRD V3.3 *** A0A1U8GTY1_CAPAN) AT2G45670 Solyc01g092950.3 411 277 170 256 415 452 434 345 258 248 197 231 318 286 273 MADS-box protein (AHRD V3.3 *** A1BQ41_VITVI) Solyc01g093965.2 287 223 161 157 100 127 115 108 208 257 136 250 303 205 187 MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) Solyc01g093960.3 557 317 464 226 121 193 123 146 130 287 128 312 32 302 104 MADS box transcription factor (AHRD V3.3 *** O82129_WHEAT) AT2G45650 Solyc01g093970.4 840 1786 1744 2206 2132 2247 2248 1906 1527 1230 1879 1605 1468 1529 1717 Hexosyltransferase (AHRD V3.3 *** A0A2G2W3R9_CAPBA) AT3G61130 Solyc01g093980.3 7 131 16 62 147 119 142 173 35 19 41 40 2 51 48 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A1P8B5N0_ARATH) Solyc01g093990.3 66 329 268 321 419 468 443 419 255 189 192 316 277 367 174 Glyoxylate/hydroxypyruvate reductase HPR3 (AHRD V3.3 *** A0A2G3AGX8_CAPAN) AT2G45630 Solyc01g094000.3 3347 2255 1783 1983 1987 1780 1883 2323 2454 3277 1728 2681 1766 1979 1807 Poly(A) RNA polymerase cid11 (AHRD V3.3 *** A0A1J3CZT2_NOCCA) AT2G45620 Solyc01g094010.3 960 1591 913 1366 698 559 560 657 1583 2213 1526 1324 1784 1059 1303 Alpha/beta-hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LX98_ARTAN) AT2G45600 Solyc01g094020.3 1083 1449 1541 1787 1804 1997 1952 1901 1344 1914 1576 1750 1281 1385 1249 Receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3DE20_CAPCH) AT2G45590 Solyc01g094030.3 1511 1556 1093 1078 1526 1505 1356 1759 1913 1522 1009 1298 1430 1244 1073 CLB1 AT3G61050 Solyc01g094040.3 202 238 324 174 166 166 166 180 194 191 363 120 364 276 287 blue copper protein-like (AHRD V3.3 *** A0A2I4GQX2_9ROSI) Solyc01g094050.1 56 173 152 136 260 154 216 361 340 179 103 184 107 168 150 WD-40 repeat family protein / beige-like protein (AHRD V3.3 *-* AT2G45540.6) Solyc01g094060.4 1220 1950 1800 2100 2276 2322 2575 2394 2425 1779 1514 2007 1563 2082 1925 BEACH domain-containing protein (AHRD V3.3 *-* A0A2U1L7V5_ARTAN) Solyc01g094070.3 16 9 42 28 7 8 18 3 33 22 51 22 30 43 55 Dihydroflavonol-4-reductase (AHRD V3.3 *** A0A2K3N028_TRIPR) AT2G45400 Solyc01g094080.4 873 717 617 459 594 530 499 622 706 496 374 568 629 647 657 Cytochrome P450 (AHRD V3.3 *** A0A200PMP8_9MAGN) Solyc01g094090.4 47 37 84 35 17 27 19 6 54 70 145 72 27 122 47 3-hydroxyisobutyryl-CoA hydrolase 1 (AHRD V3.3 *** A0A2G3BVL3_CAPCH) AT5G65940 Solyc01g094100.2 0 0 0 0 0 12 2 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200PMP8_9MAGN) Solyc01g094110.3 0 0 0 2 0 6 1 0 0 0 0 0 0 0 0 11-S seed storage protein (AHRD V3.3 *** A0A2U1KM33_ARTAN) Solyc01g094120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200PMP8_9MAGN) Solyc01g094130.2 1 0 0 0 5 0 1 0 0 1 0 0 1 0 1 Cytochrome P450 (AHRD V3.3 *** A0A200PMQ0_9MAGN) AT2G45510 Solyc01g094140.3 1 4 8 0 0 7 0 3 1 0 0 1 9 1 4 Cytochrome P450 (AHRD V3.3 *** A0A200PMQ0_9MAGN) AT2G45510 Solyc01g094150.3 421 352 386 399 350 469 397 339 349 370 417 329 446 464 469 AAA-type ATPase family protein (AHRD V3.3 *** A0A2U1ML03_ARTAN) AT2G45500 Solyc01g094160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g094170.3 273 223 227 205 99 169 155 129 229 181 284 199 286 229 128 Digalactosyldiacylglycerol synthase 2, chloroplastic (AHRD V3.3 *** A0A1U8E3X1_CAPAN) AT4G00550 Solyc01g094180.4 33 27 93 79 34 67 56 48 52 34 32 65 55 75 31 Keto acyl-acyl carrier protein synthase II (AHRD V3.3 *-* A0A2U1KPF3_ARTAN) Solyc01g094190.3 194 381 335 341 511 464 535 562 421 396 263 495 304 361 265 dTDP-4-dehydrorhamnose reductase (AHRD V3.3 *-* A0A200QUJ0_9MAGN) AT4G00560 Solyc01g094200.4 906 2046 1713 1798 1985 1781 2166 1880 2354 1380 1322 1547 2186 1903 1795 Malic enzyme (AHRD V3.3 *** A0A2G3BT53_CAPCH) AT4G00570 Solyc01g094210.2 193 74 17 101 6 2 7 8 40 16 3 1 71 14 38 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PI64_ARTAN) Solyc01g094220.3 146 113 77 79 58 68 87 71 136 80 81 60 104 154 168 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PI94_ARTAN) AT3G61220 Solyc01g094230.4 18 42 36 49 66 91 107 83 43 47 39 41 24 49 93 Riboflavin biosynthesis protein PYRR, chloroplastic (AHRD V3.3 *-* A0A2G3CU21_CAPCH) Solyc01g094240.3 1 7 32 15 18 11 21 6 12 11 21 4 4 9 34 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4JE70_ARATH) Solyc01g094260.4 58 33 55 58 23 11 9 7 102 91 105 82 26 71 109 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4JE70_ARATH) Solyc01g094270.3 0 1 1 4 0 0 0 0 0 3 0 0 0 0 4 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4JE70_ARATH) Solyc01g094280.3 2209 2230 2042 1800 1532 1229 1249 1524 1136 1447 1226 1669 2624 2294 1837 Bifunctional protein folD (AHRD V3.3 *** A0A2K3NTE4_TRIPR) AT4G00620 Solyc01g094290.3 936 1100 1036 1158 1095 1216 1319 1342 1602 1186 1032 1259 1139 1229 1376 K(+) efflux antiporter 1, chloroplastic (AHRD V3.3 *** A0A2G2YXI5_CAPAN) AT4G00630 Solyc01g094300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 U4/U6 small nuclear ribonucleoprotein Prp31-like (AHRD V3.3 *** A0A2I4E1L8_9ROSI) Solyc01g094310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 U4/U6 small nuclear ribonucleoprotein Prp31-like (AHRD V3.3 *-* A0A2K3LEE4_TRIPR) Solyc01g094320.3 2 1 0 4 2 1 1 1 1 0 0 0 6 0 0 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3C877_CEPFO) AT3G61230 Solyc01g094330.3 140 170 192 177 137 259 305 202 196 206 239 168 344 254 278 Terpene utilization protein AtuA (AHRD V3.3 *** A0A191YQC8_9PSED) AT1G01770 Solyc01g094340.3 1153 365 356 325 262 389 356 313 477 312 489 288 182 295 633 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (AHRD V3.3 *** B5LAS6_CAPAN) Solyc01g094350.4 1367 1696 1201 1143 1492 1480 1448 1680 1375 1240 1014 1463 1528 1454 1070 RNA helicase DEAD4 Solyc01g094360.3 160 320 349 388 391 519 324 461 309 265 282 472 153 297 281 MYB transcription factor (AHRD V3.3 *-* A0A0U3IU11_MESCR) AT3G61250 Solyc01g094370.3 792 731 1091 937 785 545 482 708 916 1132 1123 897 869 657 1474 remorin 2 Solyc01g094380.2 130 146 221 108 265 361 334 265 326 126 290 176 336 106 30 O-glucosyltransferase rumi-like protein (AHRD V3.3 *** A0A1J3GP63_NOCCA) AT2G45830 Solyc01g094390.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 O-glucosyltransferase rumi homolog (AHRD V3.3 *** A0A2I4FGK6_9ROSI) Solyc01g094400.3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Actin-depolymerizing factor (AHRD V3.3 *** A0A2G3BT36_CAPCH) Solyc01g094410.3 2055 1193 1628 1158 856 946 904 1011 1231 1907 2336 1283 1330 1185 1204 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061G6B5_THECC) Solyc01g094420.3 1968 2041 1707 1573 1799 1715 1613 1753 1888 1863 1246 1795 1904 2074 1576 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) AT4G08430 Solyc01g094430.1 0 0 0 0 0 0 0 0 0 7 15 0 0 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1M803_ARTAN) Solyc01g094440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1M803_ARTAN) Solyc01g094450.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1M803_ARTAN) Solyc01g094460.3 2821 1459 1284 1317 1709 1774 1876 1708 1438 2140 1255 1631 789 1030 955 AT-hook motif nuclear-localized protein 9-like (AHRD V3.3 *** A0A2I4E613_9ROSI) AT2G45850 Solyc01g094470.4 390 650 720 420 784 1004 808 771 636 265 804 589 859 622 663 Unknown protein Solyc01g094480.4 7916 4913 5001 4377 3838 4048 4083 3942 4267 5122 5272 4254 4065 4166 5208 WD40 repeat (AHRD V3.3 *** A0A200PPU0_9MAGN) AT4G15900 Solyc01g094500.3 126 195 207 212 296 298 294 246 203 157 204 242 210 193 201 Riboflavin biosynthesis protein RibD (AHRD V3.3 *** A0A2K3P0N6_TRIPR) AT4G20960 Solyc01g094510.2 16 6 14 23 27 21 19 17 15 17 5 18 10 12 10 Unknown protein Solyc01g094520.3 91 154 150 155 220 187 206 177 202 151 205 147 166 152 163 F-box/kelch-repeat protein SKIP4 (AHRD V3.3 *** A0A2G3BT10_CAPCH) AT3G61350 Solyc01g094530.4 692 713 1227 1016 1008 1154 1120 858 959 1048 1295 1183 940 984 1011 Acyl-CoA thioesterase family protein (AHRD V3.3 *** A0A2U1Q5B6_ARTAN),Pfam:PF13622 AT1G01710 Solyc01g094540.4 2608 4530 3524 3532 4603 4239 4638 5089 2219 3032 3015 3893 4268 3537 2366 Small nuclear ribonucleoprotein-associated protein (AHRD V3.3 *-* A0A2G3BT11_CAPCH) AT4G20440 Solyc01g094550.3 1046 1187 1736 1440 1562 1605 1572 1411 1386 1602 1796 1431 1162 1285 1419 Acyl-CoA thioesterase family protein (AHRD V3.3 *** A0A2U1Q5B6_ARTAN),Pfam:PF13622 AT1G01710 Solyc01g094560.4 333 546 514 388 475 562 524 461 388 332 399 369 663 529 475 60S ribosomal protein L36 (AHRD V3.3 *-* A0A2G2Z8V1_CAPAN) AT3G53740 Solyc01g094570.3 290 249 329 274 298 359 382 297 326 289 346 339 200 345 369 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MXT7_ARTAN) Solyc01g094580.3 1710 1286 1362 1091 1016 1280 1270 1211 1136 1156 907 1157 1134 1233 1066 Beta-amylase (AHRD V3.3 *** A0A2G2W5P7_CAPBA) AT2G45880 Solyc01g094590.4 62 33 14 52 4 24 14 13 22 26 37 39 34 38 41 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MX46_ARTAN) Solyc01g094600.2 16 19 12 23 25 18 11 12 13 13 0 9 18 12 10 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0XIB8_9ASPA) Solyc01g094610.4 23 114 141 154 178 142 153 141 122 79 80 104 50 65 69 Rop guanine nucleotide exchange factor 2 (AHRD V3.3 *** A0A2G3BT06_CAPCH) AT1G01700 Solyc01g094620.3 2290 1878 2446 2120 1792 2105 2151 1836 2045 2032 2102 1870 1785 2303 2414 Mediator of RNA polymerase II transcription subunit 12 (AHRD V3.3 *** A0A2G2YXN8_CAPAN) AT4G00450 Solyc01g094630.3 2687 1744 2299 2574 1572 2024 1943 1556 1292 1755 2439 1887 1441 1844 2460 pre-mRNA-splicing factor CWC22-like protein (DUF3245) (AHRD V3.3 *-* AT3G61370.3) AT3G61370 Solyc01g094640.4 1648 1376 1892 1505 1215 1490 1449 1202 1852 1509 1940 1146 1405 1519 1984 DUF3741 domain-containing protein/DUF4378 domain-containing protein (AHRD V3.3 *** A0A1Q3CNJ4_CEPFO) AT4G00440 Solyc01g094650.4 18 61 67 80 125 101 99 122 77 42 90 120 49 108 37 protein PAIR1 isoform X2 (AHRD V3.3 *** A0A1U8HLP3_CAPAN) AT1G01690 Solyc01g094660.3 2334 1017 1157 1120 454 618 701 432 765 969 1183 620 809 1049 1358 Protein kinase domain (AHRD V3.3 *** A0A200QU61_9MAGN) AT2G45910 Solyc01g094670.4 326 405 332 368 391 476 440 533 415 411 276 485 460 463 286 Aberrant root formation protein (AHRD V3.3 *** A0A1P8BFN5_ARATH) AT5G11030 Solyc01g094680.4 1959 1574 1687 1493 1453 1670 1703 1565 1660 1826 1693 1454 1891 1350 1733 Signal peptide peptidase-like 4 (AHRD V3.3 *** A0A2G3BSX8_CAPCH) AT1G01650 Solyc01g094690.4 1213 2347 3643 3124 4110 3924 3456 4278 2697 2212 3373 3571 1690 1975 1984 plasma membrane intrinsic protein 1.2 AT4G23400 Solyc01g094700.4 2247 3350 2390 2806 1901 2237 1701 2073 3278 2587 2199 2704 2895 2086 2132 Glycerol-3-phosphate acyltransferase, expressed (AHRD V3.3 *** D8L9N9_WHEAT) AT1G01610 Solyc01g094705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g094720.3 504 1204 934 971 1751 1718 1599 1796 1089 815 683 1180 818 919 827 Phosphate transporter (AHRD V3.3 *** A0A2H4H6T0_MALDO) AT4G00370 Solyc01g094723.1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 UB-like protease 1B (AHRD V3.3 --* AT4G00690.1) Solyc01g094727.1 0 5 0 0 1 1 1 0 1 0 0 2 0 0 0 Unknown protein Solyc01g094750.4 98 286 593 398 295 429 296 247 453 194 407 295 259 292 101 Cytochrome P450 (AHRD V3.3 *** A0A2U1NG86_ARTAN) AT2G45970 Solyc01g094760.3 73 253 197 236 356 381 389 388 226 161 207 297 209 233 80 Origin of replication complex subunit 5 (AHRD V3.3 *** A0A2G3BSZ3_CAPCH) AT4G29910 Solyc01g094770.4 983 581 599 569 367 520 455 413 624 685 670 525 757 754 679 mesoderm induction early response protein (AHRD V3.3 *** AT4G00355.3) AT2G45980 Solyc01g094780.4 56 120 192 97 194 134 148 166 120 132 107 90 145 149 53 LDL receptor wingless signaling/trafficking chaperone (AHRD V3.3 *** AT2G46000.1) AT2G46000 Solyc01g094790.3 383 337 345 207 323 232 180 314 401 178 181 247 243 258 294 Cysteine synthase (AHRD V3.3 *** A0A2G3BSX6_CAPCH) AT3G61440 Solyc01g094800.4 5451 4249 3985 3562 3352 3824 3961 3868 4598 3798 3702 3900 3223 4193 3929 ATP-dependent helicase BRM (AHRD V3.3 *** A0A2G2YXU8_CAPAN) AT2G46020 Solyc01g094810.3 328 262 352 407 539 483 505 563 340 467 348 431 307 276 294 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QU68_9MAGN) AT5G41340 Solyc01g094820.3 170 222 276 164 227 324 251 197 175 85 137 199 147 184 134 ARID domain-containing protein (AHRD V3.3 *** A0A1Q3B9R1_CEPFO) AT2G46040 Solyc01g094830.4 289 415 572 444 248 403 343 286 602 451 523 421 536 710 701 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 (AHRD V3.3 *** A0A2G3BSY6_CAPCH) AT4G00340 Solyc01g094840.3 379 304 375 239 155 190 151 205 241 344 337 322 276 261 253 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1M4T4_ARTAN) AT4G00335 Solyc01g094850.3 13 10 2 27 31 22 21 16 20 9 5 16 16 26 55 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2K3NKK0_TRIPR) Solyc01g094860.4 600 364 588 365 232 188 176 160 275 418 453 211 567 434 298 Transmembrane protein-related protein (AHRD V3.3 *** A0A2U1LWU9_ARTAN) AT2G46060 Solyc01g094870.3 87 462 564 908 720 895 925 989 1189 1126 2236 2345 240 662 262 PLAC8 family protein (AHRD V3.3 *** A0A2U1MEC7_ARTAN) AT4G23470 Solyc01g094880.3 1008 1020 770 1221 911 1102 1165 1038 995 1033 936 870 872 1049 1190 Quinoprotein amine dehydrogenase, beta chain-like RIC1-like guanyl-nucleotide exchange factor (AHRD V3.3 *** F4K735_ARATH) AT5G28350 Solyc01g094890.4 389 438 413 838 713 588 515 522 446 354 357 302 462 300 653 Ferric reduction oxidase 2 (AHRD V3.3 *** A0A2G2W6D0_CAPBA) Solyc01g094900.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Ferric reduction oxidase 2 (AHRD V3.3 *-* A0A2G2YXT1_CAPAN) Solyc01g094910.3 238 133 22 134 0 3 4 0 57 51 17 11 85 86 98 ferric-chelate reductase AT1G01580 Solyc01g094915.1 1 7 1 2 0 0 0 0 2 3 0 0 10 3 0 Unknown protein Solyc01g094920.3 874 910 1111 688 569 513 518 756 755 1742 1094 813 712 566 671 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3LAU4_TRIPR) Solyc01g094930.3 2282 2610 2384 2250 2794 2663 2500 3446 2567 2477 2112 2288 3198 2601 1739 CAAX prenyl protease 1 (Peptidase family M48) (AHRD V3.3 *** A0A166XK07_9PEZI) AT4G01320 Solyc01g094940.4 1454 1040 1011 869 738 613 755 855 1037 890 1311 717 487 763 1077 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1NZX1_ARTAN) AT1G01540 Solyc01g094950.3 8103 4606 5560 4063 3726 3287 3337 2965 4142 4561 6602 3181 4215 4461 7834 Protein BPS1, chloroplastic (AHRD V3.3 *** A0A2G2YY51_CAPAN) AT2G46080 Solyc01g094960.3 775 871 811 619 741 666 721 817 871 981 830 766 1086 836 718 mitogen-activated protein kinase 5 AT4G01370 Solyc01g094970.4 54 12 160 82 85 100 50 56 40 50 44 48 1 24 52 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A1I9LS88_ARATH) Solyc01g094980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g094990.2 0 13 22 30 53 37 41 38 8 7 25 7 5 12 19 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3C751_CEPFO) Solyc01g095000.3 254 168 127 148 111 110 124 95 104 114 114 80 189 164 233 Nuclear transport factor 2 (NTF2) family protein (AHRD V3.3 *** B4FRE7_MAIZE) AT2G46100 Solyc01g095010.4 191 283 307 231 306 265 299 322 273 254 173 315 273 252 240 Sphingoid long-chain bases kinase 2, mitochondrial (AHRD V3.3 *** A0A2G3BT73_CAPCH) AT2G46090 Solyc01g095020.3 3207 2093 2096 2334 1588 1640 1686 1570 2012 2081 2000 1674 2396 2484 2598 chorismate synthase (AHRD V3.3 *** AT4G01290.2) AT4G01290 Solyc01g095030.3 2674 1289 258 590 905 654 684 778 869 1263 285 594 1149 454 409 Altered Response to Salt Stress 1 Solyc01g095040.3 2624 2577 2470 2017 2471 2206 2284 2866 2275 2692 2066 2411 2306 2116 2123 C-terminal binding protein AN (AHRD V3.3 *** A0A2G3BT74_CAPCH) AT1G01510 Solyc01g095050.3 3911 3659 6556 4759 5014 4834 4774 3944 4506 4055 7374 3892 4038 4097 7914 cAMP-regulated phosphoprotein 19-related protein (AHRD V3.3 *** A0A2U1NUR8_ARTAN) AT5G64130 Solyc01g095060.4 146 64 54 92 62 51 46 43 47 77 106 72 48 68 131 Erythronate-4-phosphate dehydrogenase family protein (AHRD V3.3 *-* A0A2U1KDV3_ARTAN) Solyc01g095070.4 697 771 728 1065 935 829 641 773 583 913 925 547 803 555 736 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6R9M9_ACTCH) AT1G01490 Solyc01g095080.3 5 8 7 3 10 14 10 4 19 16 5 9 21 13 7 1-aminocyclopropane-1-carboxylic acid synthase-2 AT1G01480 Solyc01g095090.3 42 165 132 110 144 186 162 188 134 86 67 126 105 123 49 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1PKV6_ARTAN) AT4G01270 Solyc01g095100.4 289 371 872 657 268 288 252 255 463 508 1095 274 302 212 576 WRKY transcription factor 22 AT4G01250 Solyc01g095110.4 187 351 253 290 372 310 278 350 262 165 233 257 262 312 215 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1J3JYF9_NOCCA) AT3G61520 Solyc01g095120.3 617 751 616 666 861 744 714 788 883 1007 556 671 938 874 625 Proline iminopeptidase (AHRD V3.3 *** A0A1J3I0I9_NOCCA) AT3G61540 Solyc01g095130.4 23 47 125 66 117 145 149 116 54 43 57 95 78 52 10 E4 SUMO-protein ligase PIAL1-like isoform X1 (AHRD V3.3 *-* A0A2I4GBH8_9ROSI) Solyc01g095140.4 495 563 8797 296 2 13 10 10 305 1896 12570 433 319 481 1516 Desiccation protectant protein Lea14-like protein (AHRD V3.3 *** A0A2G3BT76_CAPCH) AT1G01470 Solyc01g095150.3 1839 1350 8182 1013 299 236 239 227 604 3470 6820 1129 997 846 2274 late embryogenesis-like protein AT2G46140 Solyc01g095160.3 45 63 27 51 25 28 36 50 34 29 27 39 62 60 42 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3DBJ5_CAPCH) AT4G37170 Solyc01g095180.2 697 1026 904 1279 827 994 1057 742 700 786 888 906 987 1113 830 RING/U-box superfamily protein (AHRD V3.3 *-* A0A178VRD3_ARATH) AT2G46160 Solyc01g095190.2 9 38 52 39 29 36 31 16 25 21 37 15 61 26 38 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q9M144_ARATH) AT4G01240 Solyc01g095200.3 4103 3167 2690 3145 2357 2626 2416 2571 2774 3258 2287 2904 3085 2894 2755 proteinase inhibitor 2 AT4G23630 Solyc01g095210.3 698 910 883 979 900 932 1042 940 1117 746 981 852 1009 1104 1092 Golgin candidate 4 (AHRD V3.3 *** A0A2G2YY90_CAPAN) AT2G46180 Solyc01g095220.2 99 76 60 100 54 70 73 43 62 38 75 45 56 63 81 Unknown protein Solyc01g095230.4 369 332 372 230 277 322 289 257 231 166 256 301 333 426 349 U11/U12 small nuclear ribonucleoprotein 59 kDa protein (AHRD V3.3 *** A0A2G3BSX0_CAPCH) AT2G46200 Solyc01g095240.3 65 90 49 84 66 56 31 39 60 103 80 30 90 34 41 Calcium-transporting ATPase 2, endoplasmic reticulum-type (AHRD V3.3 *-* A0A2G2XWG1_CAPAN) Solyc01g095250.1 0 3 3 3 0 0 3 0 5 2 3 8 1 0 0 Acidic endochitinase (AHRD V3.3 *** A0A2G2YXU9_CAPAN) AT5G24090 Solyc01g095260.1 9 1 0 0 2 1 0 0 0 1 13 3 0 0 1 Acidic endochitinase (AHRD V3.3 *** A0A2G2YXU9_CAPAN) AT5G24090 Solyc01g095270.3 953 386 389 464 224 236 234 183 435 635 476 504 499 457 441 DUF2358 domain-containing protein (AHRD V3.3 *** A0A1Q3BPE1_CEPFO) AT2G46220 Solyc01g095280.4 1225 1007 1065 1071 701 724 760 794 1075 1056 1054 800 1344 957 973 Protein ABIL1 (AHRD V3.3 *** A0A1U8E2Z9_CAPAN) AT2G46225 Solyc01g095290.4 232 465 322 425 459 473 467 635 467 406 356 529 403 356 270 Glycosyltransferase (AHRD V3.3 *** A0A1U8DT12_CAPAN) AT4G01220 Solyc01g095295.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VVU6_9ASPA) ATMG00810 Solyc01g095300.3 1168 1182 1383 1322 1604 1641 1662 1451 1466 970 1132 1188 1048 1128 1164 Glycosyl transferase, family 1 (AHRD V3.3 *** A0A2U1P6H1_ARTAN) AT4G01210 Solyc01g095310.1 11 5 5 1 9 7 1 9 4 0 8 14 10 6 7 Acidic endochitinase (AHRD V3.3 *** A0A1U8DT03_CAPAN) Solyc01g095320.4 732 727 191 273 122 107 107 100 368 157 1816 101 633 1578 1170 Bag family molecular chaperone regulator 6-like protein (AHRD V3.3 *** A0A2K3PRI9_TRIPR) AT2G46240 Solyc01g095330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g095350.2 2 1 9 4 1 4 3 0 1 0 0 6 2 0 1 Unknown protein Solyc01g095360.2 27 137 255 262 383 424 401 301 190 92 174 317 75 204 74 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* Q9M148_ARATH) AT4G01200 Solyc01g095370.3 612 541 605 703 636 814 688 559 537 713 660 614 592 633 529 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1U8DT00_CAPAN) AT3G61590 Solyc01g095380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g095390.3 343 362 269 283 158 152 117 132 221 187 223 198 333 238 352 Intracellular protein transporter USO1-like protein (AHRD V3.3 *-* A0A1P8BBF8_ARATH) Solyc01g095400.4 2446 1667 1465 1330 1263 1122 1099 1248 1454 2230 1471 1445 1554 1414 1666 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A1U8E4A8_CAPAN) AT3G61600 Solyc01g095410.3 13393 6482 8124 7069 4072 5228 4261 3164 5295 5538 8467 4696 7938 7299 12467 eukaryotic translation initiation factor 1A-like (AHRD V3.3 *** A0A2I4HKY5_9ROSI) AT2G04520 Solyc01g095420.3 355 532 419 366 520 443 382 359 381 315 286 351 540 507 395 copper ion binding protein (AHRD V3.3 *** AT4G05400.3) AT4G05400 Solyc01g095430.3 2765 2952 3147 3700 3921 3292 3414 3742 2848 4631 3602 3489 1772 1935 3674 Protein CURVATURE THYLAKOID 1A, chloroplastic (AHRD V3.3 *** A0A2G2YXY1_CAPAN) AT4G01150 Solyc01g095440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF1191 domain-containing protein (AHRD V3.3 *** A0A1Q3BWS1_CEPFO) AT4G01140 Solyc01g095450.4 18 72 132 77 595 409 490 425 123 79 186 176 23 30 72 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2W6L9_CAPBA) AT4G01130 Solyc01g095460.3 2585 1405 1458 1295 1308 1075 981 966 1138 1581 1450 1415 1546 2092 3764 Common plant regulatory factor 1 (AHRD V3.3 *** A0A1U8DT23_CAPAN) AT2G46270 Solyc01g095470.3 779 1542 1227 1339 2108 1905 1883 1900 1678 1390 1145 1552 1388 1505 1565 Glucose-6-phosphate 1-epimerase (AHRD V3.3 *** A0A1U8DT32_CAPAN) AT3G61610 Solyc01g095480.4 771 868 862 664 634 597 615 589 585 654 618 639 815 859 865 Exosome complex component Rrp41 (AHRD V3.3 *** A0A2G2YY34_CAPAN) AT3G61620 Solyc01g095490.3 481 413 326 297 430 353 300 400 321 404 261 350 449 348 385 Ubiquitin-conjugating enzyme (AHRD V3.3 *** H6VUS9_9FABA) Solyc01g095500.3 10 49 38 16 91 69 66 63 20 10 7 40 56 37 45 Sl Cytokinin Response Factor 5 Solyc01g095510.3 195 261 135 165 132 137 158 146 170 155 132 114 188 159 193 Mitochondrial carrier protein MTM1 (AHRD V3.3 *** A0A2G3BTD4_CAPCH) Solyc01g095515.1 6 7 17 7 6 3 6 10 4 6 4 2 7 3 9 Arabinogalactan peptide (AHRD V3.3 *** A0A200Q7C1_9MAGN) AT3G61640 Solyc01g095530.2 6687 5951 1338 9062 5453 6344 5601 4372 4147 3192 658 1329 7400 1246 4846 hypothetical protein (AHRD V3.3 *-* AT5G41761.1) Solyc01g095540.3 570 580 627 637 603 598 619 510 502 573 504 540 668 547 505 CMP-sialic acid transporter 1 (AHRD V3.3 *** A0A1U8E4F1_CAPAN) AT5G41760 Solyc01g095550.2 1 9 10 6 7 19 5 10 4 1 6 13 5 6 19 Protein kinase family protein (AHRD V3.3 *** Q9FGG5_ARATH) Solyc01g095560.3 75 40 29 41 41 20 28 8 22 68 64 24 138 50 37 Unknown protein Solyc01g095570.3 1131 1493 363 802 1232 1026 993 1063 814 807 388 542 1176 706 385 Mitochondrial carrier protein (AHRD V3.3 *** A0A200PUN8_9MAGN) AT4G01100 Solyc01g095580.3 1247 677 816 720 694 702 679 673 755 999 1223 576 894 832 985 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1NZC8_ARTAN) AT2G46370 Solyc01g095590.3 1604 1571 1409 1280 1498 1515 1473 1765 1780 1727 1434 1853 1926 1555 1097 Extra-large G-like protein, putative (DUF3133) (AHRD V3.3 *** Q0WVG1_ARATH) AT2G46380 Solyc01g095600.4 75 38 33 31 33 23 18 18 25 24 44 29 38 53 70 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8GFQ6_CAPAN) AT3G18840 Solyc01g095610.4 42 44 71 49 35 33 31 29 33 52 73 24 44 43 21 Protein trichome birefringence-like 25 (AHRD V3.3 *** A0A2G2W6P1_CAPBA) Solyc01g095620.3 2207 1768 945 1104 1373 1138 1097 1536 1443 2769 1235 1632 1219 943 1496 Glycosyltransferase (AHRD V3.3 *** A0A2U1KKS2_ARTAN) AT4G01070 Solyc01g095630.3 5651 2436 3811 1748 228 308 222 236 1243 2186 10725 1761 3106 2842 4032 WRKY transcription factor 41 Solyc01g095640.2 19 17 9 20 43 43 85 60 24 8 34 16 4 20 16 MYB-like transcription factor TCL1 (AHRD V3.3 *** A0A1U8HLQ3_CAPAN) AT5G53200 Solyc01g095650.4 31 148 108 164 295 346 372 321 134 90 214 167 42 95 82 Histone H3 (AHRD V3.3 *** A1BPL5_ARAHH) AT1G01370 Solyc01g095670.4 779 1204 848 1120 2464 2111 2044 2274 1345 1686 1040 1271 945 788 1081 Rhodanese-like domain-containing protein 4, chloroplastic (AHRD V3.3 *** A0A2G2YYH2_CAPAN) AT4G01050 Solyc01g095680.2 335 265 400 280 229 222 291 245 267 210 262 240 373 407 408 Plant organelle RNA recognition domain containing protein (AHRD V3.3 *-* A0A2P5DTG0_TREOI) Solyc01g095690.2 153 75 125 56 250 252 265 229 97 169 125 123 37 82 78 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2YY96_CAPAN) AT4G01030 Solyc01g095700.3 1545 709 985 875 417 431 424 392 906 1479 1497 597 1060 762 1054 Abscisic acid receptor PYL10 (AHRD V3.3 *** A0A2G3BTC1_CAPCH) Solyc01g095710.3 919 828 570 582 612 557 578 579 789 624 628 633 595 828 623 RNA helicase DEAH-box3 AT1G33390 Solyc01g150148.1 1 5 7 5 5 0 2 2 4 3 4 10 2 2 0 Unknown protein Solyc01g095720.3 142 129 148 286 118 118 108 98 91 184 145 166 98 130 130 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1L1L1_ARTAN) AT3G61680 Solyc01g095730.4 2162 1669 1480 1529 1408 1370 1610 1527 1554 1547 1427 1522 1398 1835 1659 PAP/OAS1 substrate-binding domain superfamily (AHRD V3.3 *-* F4J4G2_ARATH) AT3G61690 Solyc01g095740.4 1493 1964 1403 1332 1038 1072 1084 1149 1363 1092 1037 1451 1627 1959 1551 RNA helicase DEAD5 AT5G08610 Solyc01g095750.2 64 248 223 184 378 344 360 336 192 77 198 173 165 114 119 Long chain acyl-CoA synthetase 5 (AHRD V3.3 *** A0A2G3BTB6_CAPCH) Solyc01g095760.3 1 0 0 0 3 10 4 2 0 0 2 4 6 7 1 Glycosyltransferase (AHRD V3.3 *** A0A328CVV5_9ASTE) Solyc01g095770.3 31 19 46 23 0 6 4 4 47 92 266 45 14 41 39 Cyclic nucleotide-gated channel 7 (AHRD V3.3 *** A0A2U8YLK9_TOBAC) Solyc01g095780.2 0 0 2 1 0 3 0 0 1 0 1 0 0 0 0 non-specific lipid-transfer protein-like (AHRD V3.3 *** A0A1S4D5K2_TOBAC) Solyc01g095790.4 21782 6058 2916 3608 2725 2071 1845 2727 4895 5292 3916 4407 2946 3608 3749 Protein SDE2-like protein (AHRD V3.3 *** A0A2G3BTD6_CAPCH) AT4G01000 Solyc01g095800.3 383 397 363 404 440 524 498 447 468 394 322 454 375 437 311 F-box protein (AHRD V3.3 *** A0A2G2XT66_CAPBA) AT5G51380 Solyc01g095810.3 2 0 5 2 1 0 0 2 2 0 2 0 0 1 2 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1KEI5_ARTAN) Solyc01g095820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1KEI5_ARTAN) Solyc01g095830.3 0 0 0 2 0 0 3 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1MJ85_ARTAN) AT2G46495 Solyc01g095840.2 3 13 105 55 67 128 83 55 5 24 25 38 12 52 61 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1MJ85_ARTAN) AT2G46495 Solyc01g095850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1MJ85_ARTAN) AT2G46495 Solyc01g095860.3 1 3 1 3 0 3 0 0 1 1 16 1 4 1 1 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QFN9_ARTAN) AT2G46495 Solyc01g095870.3 0 17 31 8 20 14 9 13 7 2 0 11 6 10 27 F-box protein (AHRD V3.3 *** A0A2U1PSS6_ARTAN) AT5G36000 Solyc01g095880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *** A0A200QX46_9MAGN) Solyc01g095890.4 1315 902 754 1183 926 1130 1110 809 655 809 824 736 652 961 816 Histone-lysine N-methyltransferase (AHRD V3.3 *** A0A2G2YYC3_CAPAN) Solyc01g095895.1 18 18 16 3 6 6 4 11 6 19 11 13 5 14 14 Unknown protein Solyc01g095900.4 2420 1741 1327 2800 1067 1223 1502 1310 1307 1441 1183 1311 1148 1604 1673 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1QFM4_ARTAN) AT1G01320 Solyc01g095905.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Cytochrome and DOMON domain-containing protein (AHRD V3.3 *-* A0A2G3BTC7_CAPCH) Solyc01g095920.4 0 0 2 2 0 7 0 0 0 0 0 1 0 2 23 Ankyrin repeat/KH domain protein (DUF1442) (AHRD V3.3 *** O22136_ARATH) Solyc01g095930.4 801 499 165 251 1 4 3 0 82 132 33 16 120 959 3117 O-acyltransferase WSD1-like (AHRD V3.3 *** A0A2I4HF74_9ROSI) Solyc01g095950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A1U8QD58_CAPAN) Solyc01g095960.4 72 371 147 424 154 245 197 197 158 378 72 225 167 266 59 O-acyltransferase WSD1-like (AHRD V3.3 *** A0A2I4EG31_9ROSI) Solyc01g095970.3 323 626 580 605 707 676 627 696 577 484 525 557 425 482 441 Dynamin-like protein (AHRD V3.3 *** F4K015_ARATH) AT5G42080 Solyc01g095980.3 134 247 195 226 282 396 284 307 181 167 172 209 156 181 135 Acid phosphatase/vanadium-dependent haloperoxidase-related protein (AHRD V3.3 *** Q8RXV2_ARATH) AT3G61770 Solyc01g095990.3 1203 1088 1462 1269 1206 1148 1090 1219 1224 1727 1461 1170 964 895 1079 phosphatidylinositol 4-kinase gamma 4-like (AHRD V3.3 *** A0A2I4FK44_9ROSI) AT2G46500 Solyc01g096000.2 686 728 751 805 991 759 783 958 765 1063 845 896 917 620 635 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9T0A8_ARATH) Solyc01g096010.4 685 838 739 617 589 650 616 573 803 451 589 649 696 939 575 Embryo defective 1703 (AHRD V3.3 *** Q9M360_ARATH) AT3G61780 Solyc01g096020.4 547 449 605 584 674 751 669 537 438 547 822 501 334 411 547 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G3BTI0_CAPCH) Solyc01g096030.4 381 241 184 177 153 175 208 197 238 232 229 175 230 177 272 UV-stimulated scaffold protein A homolog (AHRD V3.3 *** A0A2I4GS49_9ROSI) AT3G61800 Solyc01g096040.4 2618 5416 5287 5657 5002 5223 5400 4617 4895 5083 4748 5634 5770 6085 7255 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A072U5I5_MEDTR) AT1G01300 Solyc01g096050.4 756 635 811 539 420 498 504 464 364 542 457 393 488 529 787 Transcription factor bHLH13 (AHRD V3.3 *** A0A2G2W6S0_CAPBA) AT1G01260 Solyc01g096060.4 826 1687 1200 1086 1501 1706 1361 2022 1217 975 790 1385 1341 1333 753 Exportin-2 (AHRD V3.3 *** A0A2G2YYL9_CAPAN) AT2G46520 Solyc01g096070.3 2283 4080 2670 2530 6535 7364 8593 6231 3095 2265 2585 3482 3407 3474 2505 Auxin Response Factor 18 AT4G23980 Solyc01g096080.3 895 829 1632 1169 1395 1421 1360 1254 1235 1091 1589 1559 1047 1117 1209 DUF688 domain-containing protein (AHRD V3.3 *** A0A1Q3BJN3_CEPFO) AT4G00950 Solyc01g096090.4 349 510 782 709 762 961 956 574 518 487 538 555 532 674 668 Fiber protein Fb11 (AHRD V3.3 *** B6SNA3_MAIZE) AT2G46540 Solyc01g096100.2 2319 1028 1573 975 939 1087 1241 806 1092 1336 1662 1041 970 1240 1400 Transmembrane protein (AHRD V3.3 *** A0A1P8B1K1_ARATH) AT2G46550 Solyc01g096110.3 1451 1281 1321 1317 1522 1519 1693 1477 1519 1210 1144 1292 1181 1708 1447 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1M7G0_ARTAN) AT2G46560 Solyc01g096120.3 189 198 242 221 182 191 170 159 93 85 179 108 181 185 134 Dof zinc finger protein1 AT2G46590 Solyc01g096130.3 773 398 232 396 315 283 290 332 328 635 395 398 353 354 379 ORMDL (AHRD V3.3 *** A0A200Q7B4_9MAGN) AT1G01230 Solyc01g096140.3 0 0 0 1 2 3 7 7 3 0 0 5 0 0 0 Aluminum-activated malate transporter 10 (AHRD V3.3 *** A0A2G2YY99_CAPAN) AT4G00910 Solyc01g096150.4 263 249 435 308 452 528 478 506 378 416 547 460 246 266 343 LRAT domain-containing protein (AHRD V3.3 *** A0A1Q3AS87_CEPFO) AT1G01225 Solyc01g096160.4 471 321 362 328 246 342 368 298 328 363 281 365 374 479 326 L-fucokinase/GDP-L-fucose pyrophosphorylase (AHRD V3.3 *** A0A2U1NSI7_ARTAN) AT1G01220 Solyc01g096170.4 13 9 17 33 20 20 16 13 15 18 8 18 23 47 59 MAP kinase kinase kinase 5 AT5G41990 Solyc01g096180.4 372 260 277 283 138 261 208 204 207 195 289 214 305 323 311 Serine/arginine-rich-splicing factor RS31 (AHRD V3.3 *** A0A0M8KSL4_NICAT) AT3G61860 Solyc01g096190.3 1926 1455 1523 1590 1204 1348 1305 1459 1259 1561 1077 1085 2684 1737 1119 Ca2+-ATPase AT4G00900 Solyc01g096200.4 896 729 1873 1015 611 797 833 583 826 1128 1429 615 934 874 1195 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2W6T8_CAPBA) Solyc01g096210.4 791 567 428 597 543 430 554 802 410 920 365 494 411 426 319 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q2Z2_9MAGN) AT5G16420 Solyc01g096220.3 119 467 563 461 620 571 521 669 655 420 636 551 484 357 421 Ras-related protein RABA3 (AHRD V3.3 *** A0A2G2W6X9_CAPBA) AT1G01200 Solyc01g096230.4 222 208 193 139 112 153 129 144 187 238 210 181 352 186 164 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NSJ9_ARTAN) AT2G46620 Solyc01g096240.4 1146 1648 1420 1696 1737 1698 1599 1903 1680 2167 1608 1819 1075 1191 1814 plant/protein (AHRD V3.3 *** AT3G61870.1) AT3G61870 Solyc01g096250.2 521 1649 1316 2538 1446 1057 1159 1058 978 2344 1662 903 1209 1023 726 proline-rich receptor-like protein kinase PERK2 (AHRD V3.3 *-* A0A2I4GSB7_9ROSI) Solyc01g096260.4 1343 563 635 816 132 94 74 81 751 1709 1030 306 447 429 374 NAD-dependent protein deacetylase HST1-like protein (AHRD V3.3 *** AT2G46640.2) AT2G46640 Solyc01g096270.3 1686 1498 1992 1744 1444 1524 1521 1338 1905 1965 2342 2284 2026 1979 2201 Cytochrome b5 (AHRD V3.3 *** A0A2G2W6T4_CAPBA) Solyc01g096280.2 43 104 67 148 84 65 42 68 310 81 76 362 254 239 201 Cytochrome P450 (AHRD V3.3 *** A0A200Q2S1_9MAGN) AT2G46660 Solyc01g096290.4 3807 5147 5167 3699 4728 4656 4693 4622 3427 3330 3799 3966 5639 4645 4790 Ubiquitin (AHRD V3.3 *** B2W3N0_PYRTR) AT3G52590 Solyc01g096300.4 132 122 112 168 87 199 145 131 99 116 150 144 97 157 165 Ubiquitin-specific protease family C19 protein (AHRD V3.3 *-* A0A2K3NKS0_TRIPR) Solyc01g096320.3 1333 277 77 167 0 7 2 1 182 450 190 118 89 1540 5919 Homeobox-leucine zipper protein HOX6 (AHRD V3.3 *** A0A1U8DTA9_CAPAN) AT3G61890 Solyc01g096330.2 19 3 7 14 1 6 2 0 4 9 9 13 10 12 22 Unknown protein Solyc01g096340.3 161 78 91 119 6 27 22 16 24 44 79 26 163 126 274 Small auxin up-regulated RNA2 Solyc01g096350.3 1065 881 898 847 584 665 612 664 865 797 919 737 958 884 901 CDPK-related kinase 4 (AHRD V3.3 *** A0A2G2W6Y9_CAPBA) AT2G46700 Solyc01g096360.3 159 553 532 635 499 579 569 611 1350 496 822 630 470 558 539 Rho GTPase-activating protein 3 (AHRD V3.3 *** A0A2G2YYE8_CAPAN) AT2G46710 Solyc01g096370.4 1272 1990 1427 1595 1638 1476 1498 1547 2406 2435 3076 2977 1712 1629 1749 transcription factor MYC2 (AHRD V3.3 *** A0A2I4DDN6_9ROSI) Solyc01g096380.1 0 4 0 0 3 1 0 0 4 8 0 5 3 3 1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** F4HS78_ARATH) AT1G01180 Solyc01g096390.4 2710 2969 3614 3324 3351 3813 3950 3390 3280 3115 3555 3809 2236 3259 3236 DNA-directed RNA polymerase subunit (AHRD V3.3 *** A0A2G2YYG0_CAPAN) AT2G40030 Solyc01g096400.4 10 19 10 32 12 20 17 16 54 32 23 64 15 37 13 Transglut_core2 domain-containing protein (AHRD V3.3 *** A0A1Q3C505_CEPFO) Solyc01g096405.1 5 21 54 25 29 47 30 23 25 18 51 37 13 29 64 Unknown protein Solyc01g096410.4 43 162 192 164 196 200 158 182 221 143 164 213 81 153 165 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *** K4B029_SOLLC) AT3G07960 Solyc01g096420.3 165 197 246 219 38 22 55 23 200 634 238 217 1181 551 1438 NADPH quinone oxidoreductase (AHRD V3.3 *** A0A2K3LWY2_TRIPR) AT3G27890 Solyc01g096430.4 290 474 663 567 525 731 707 507 560 500 859 356 842 639 1092 NADPH:quinone oxidoreductase-like (AHRD V3.3 *** A0A2I4GZV4_9ROSI) AT3G27890 Solyc01g150149.1 28 24 34 22 13 38 32 9 25 17 8 27 27 23 29 Unknown protein Solyc01g096440.4 16 17 26 25 26 22 34 30 37 23 16 17 14 26 13 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0X265_9ASPA) Solyc01g096450.4 2283 54125 29202 25712 45961 40994 45528 52117 54384 27866 23382 42115 25964 30298 20009 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1PLR1_ARTAN) AT5G07030 Solyc01g096460.2 353 180 207 254 171 179 148 144 180 304 227 164 221 162 243 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* T1R384_DATGL) AT1G08315 Solyc01g096470.3 3268 2550 2308 4214 1927 1882 1613 1654 1968 3150 2044 1804 3202 2203 3722 Sequence-specific DNA binding transcription factor (AHRD V3.3 *** A0A1I9LTW1_ARATH) AT3G54390 Solyc01g096480.2 1058 1460 1322 2026 1156 1043 1256 1098 675 1327 1139 1142 926 1254 1027 thioredoxin AF261142 AT3G06730 Solyc01g096490.3 1724 1533 1690 1666 1221 1610 1698 1483 1690 1333 1483 1425 1251 1633 1792 E3 ubiquitin-protein ligase KEG (AHRD V3.3 *** A0A2G2W6Y1_CAPBA) AT5G13530 Solyc01g096500.3 1386 1333 1420 1384 1425 1212 1388 1448 1511 1563 1532 1288 1212 1259 1373 Sphingoid long-chain bases kinase 1 (AHRD V3.3 *** A0A2G2W708_CAPBA) AT5G23450 Solyc01g096510.2 346 102 74 12 1 0 0 0 5 15 217 23 280 255 307 Sigma factor binding protein 1, chloroplastic (AHRD V3.3 *** A0A2G2W6X7_CAPBA) AT3G56710 Solyc01g096520.3 349 529 656 592 655 668 631 600 437 377 734 446 796 612 549 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2G2YYH4_CAPAN) AT2G38730 Solyc01g096530.3 254 254 358 345 372 354 293 260 303 290 398 328 338 379 417 Trafficking protein particle complex subunit (AHRD V3.3 *** A0A1U8DVU7_CAPAN) AT5G54750 Solyc01g096540.4 674 1188 1029 1033 1114 1106 1198 1405 1281 1110 990 1104 1069 1246 940 DUF810 domain-containing protein (AHRD V3.3 *** A0A1Q3BQC6_CEPFO),Pfam:PF05664 AT5G06970 Solyc01g096550.3 515 1028 815 684 454 726 661 445 483 388 516 560 1281 1199 978 Protein arginine N-methyltransferase (AHRD V3.3 *** A0A200R777_9MAGN) AT3G12270 Solyc01g096560.3 40 63 31 71 21 44 30 9 26 29 64 19 32 49 108 Subtilisin-like protease (AHRD V3.3 *** A0A2I0XJ46_9ASPA) Solyc01g096570.3 5215 3575 4225 4432 4429 4700 4510 4546 5041 5076 4570 5260 3601 4036 4370 Exonuclease (AHRD V3.3 *** A0A200Q3Q8_9MAGN) Solyc01g096580.3 1792 3253 2587 2075 2598 2394 2445 2290 1834 1539 2177 1741 3903 3163 2970 40S ribosomal protein S20 (AHRD V3.3 *** A0A2G3BTN1_CAPCH) AT5G62300 Solyc01g096590.3 1074 2515 2457 1654 2401 2274 2516 2416 1443 1373 1927 1785 2949 2208 2279 40S ribosomal protein S20 (AHRD V3.3 *** A0A2G3BTN1_CAPCH) AT5G62300 Solyc01g096600.4 1803 1765 1265 1253 1332 1336 1310 1402 1377 1308 1224 1299 1420 1530 1629 THO complex subunit 1 (AHRD V3.3 *** A0A2G2YYN0_CAPAN) AT5G09860 Solyc01g096610.4 675 435 375 354 301 328 396 356 350 388 398 301 476 456 560 Cilia- and flagella-associated protein 20 (AHRD V3.3 *** CFA20_CHLRE) AT3G12300 Solyc01g096620.4 853 472 21 230 368 301 301 356 261 563 36 191 226 140 62 Cilia-and flagella-associated protein 20 (AHRD V3.3 *-* A0A2G2YYL7_CAPAN) Solyc01g096630.3 1899 901 115 664 836 809 900 661 477 901 162 439 477 268 375 Cilia-and flagella-associated protein 20 (AHRD V3.3 *-* A0A2G2YYL7_CAPAN) Solyc01g096650.3 10 27 34 48 60 67 51 55 28 25 24 43 30 27 30 RING/U-box superfamily protein (AHRD V3.3 *-* F4KJ04_ARATH) AT5G07040 Solyc01g096660.3 806 1491 680 877 1156 1112 1252 1352 1139 1181 558 867 1153 609 827 proline-rich family protein (AHRD V3.3 *** AT5G07020.1) AT5G07020 Solyc01g096670.4 238 1691 698 865 2629 2328 2446 2476 1419 1169 907 1565 1115 1486 522 Cytochrome P450 (AHRD V3.3 *** A0A2U1MC34_ARTAN) AT2G40890 Solyc01g096680.4 58 216 286 280 406 399 368 383 233 175 315 362 90 229 151 65-kDa microtubule-associated protein 5 (AHRD V3.3 *** A0A2G2YYM5_CAPAN),Pfam:PF03999 AT2G38720 Solyc01g096690.3 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 Protein kinase domain (AHRD V3.3 *** A0A200R817_9MAGN) Solyc01g096700.4 9741 10674 8439 9225 9764 12160 10390 8053 8336 6061 10339 7366 10373 10066 12276 DnaJ domain-containing protein (AHRD V3.3 *-* A0A2U1QIS2_ARTAN) AT3G11450 Solyc01g096710.4 1753 1686 1997 1964 2005 1858 2001 1860 1681 1543 2316 1871 1988 1972 1936 Dr1-associated corepressor (AHRD V3.3 *** A0A2G3BTP5_CAPCH) AT3G12480 Solyc01g096720.4 0 0 0 0 3 0 0 3 0 6 0 0 2 0 0 Protein ZINC INDUCED FACILITATOR-LIKE 1 (AHRD V3.3 *** A0A1J3IH30_NOCCA) AT5G13750 Solyc01g096730.2 468 830 653 544 545 542 515 522 749 1706 791 787 2147 882 509 protein ZINC INDUCED FACILITATOR-LIKE 1-like (AHRD V3.3 *** A0A2I4H204_9ROSI) AT5G13750 Solyc01g096740.4 264 298 271 384 454 495 507 530 447 656 546 714 532 378 274 Protein ZINC INDUCED FACILITATOR-LIKE 1 (AHRD V3.3 *** A0A1J3IH30_NOCCA) AT5G13750 Solyc01g096750.1 4 23 218 261 91 106 114 135 20 112 21 143 29 45 9 Argonaute4d Solyc01g096760.3 663 772 766 551 651 645 668 571 454 446 709 515 825 650 700 pre-rRNA-processing protein TSR2-like (AHRD V3.3 *** A0A2I4GN69_9ROSI) AT5G27990 Solyc01g096770.2 0 0 0 0 0 0 0 0 0 0 0 4 0 2 0 Unknown protein Solyc01g096780.4 1903 2485 1903 1704 2607 2023 1880 2826 2147 2110 1443 2370 2275 1847 1717 Protein SAD1/UNC-84 domain protein 2 (AHRD V3.3 *** A0A2G2YYK2_CAPAN) AT5G04990 Solyc01g096790.4 82 31 71 38 46 80 53 49 51 32 50 52 52 114 38 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3CKL9_CEPFO) Solyc01g096800.3 606 1193 645 549 567 397 483 614 604 373 426 555 1347 1281 526 Peter Pan-like protein (AHRD V3.3 *** A0A2G2W6Y4_CAPBA) AT5G61770 Solyc01g096810.3 19156 4981 3475 3091 976 1037 959 974 3192 6827 4471 2693 3726 3122 3467 EIL3 Solyc01g096820.4 25 6 2 16 0 2 3 6 12 16 10 8 5 5 29 Calcium/calmodulin dependent protein kinase (AHRD V3.3 *** Q9S792_TOBAC) Solyc01g096830.3 1461 2030 1763 1881 1660 1877 1824 1905 1919 1580 1630 1762 1868 1870 1715 Cation-transporting ATPase (AHRD V3.3 *** A0A2G3BTP9_CAPCH) AT5G23630 Solyc01g096840.3 64 358 337 420 803 739 772 825 418 203 363 480 83 254 167 QWRF motif protein (DUF566) (AHRD V3.3 *-* A0A1P8B957_ARATH) AT2G44190 Solyc01g096850.4 513 434 437 443 412 414 472 440 520 456 410 460 492 523 480 Protein FAR1-RELATED SEQUENCE 3 (AHRD V3.3 *** A0A2G2YYN7_CAPAN) AT2G27110 Solyc01g096860.3 5 16 22 46 58 50 31 67 18 21 32 43 1 5 6 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2YVB3_CAPAN) AT3G54320 Solyc01g096870.4 1522 1514 1375 1115 1170 1214 1317 1224 1346 1085 1346 1084 1518 1560 1785 Proline-tRNA ligase-like protein (AHRD V3.3 *** A0A2K3PF09_TRIPR) AT5G52520 Solyc01g096880.4 284 330 363 471 205 210 135 236 606 375 638 302 310 258 482 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AZ04_ARATH) AT2G26690 Solyc01g096890.4 374 386 346 397 394 315 391 304 351 320 405 308 385 404 299 Serine-rich adhesin for platelets-like protein (AHRD V3.3 *-* A0A2K3NC33_TRIPR) Solyc01g096900.3 2673 2454 2150 1773 1834 1708 1866 2232 1630 1726 1460 1935 2128 2345 1600 DNA gyrase subunit A (AHRD V3.3 *** A0A2U1Q6G1_ARTAN) AT3G10690 Solyc01g096910.3 1915 1390 1217 1539 1354 1232 1229 1480 1194 2177 1202 1454 1072 1235 1046 Vacuolar protein sorting-associated protein 36 (AHRD V3.3 *** A0A2G3BTR2_CAPCH),Pfam:PF04157 AT5G04920 Solyc01g096920.3 2914 1982 1609 1150 1043 908 884 966 1472 1226 1312 1430 2070 2157 1633 GATA zinc finger protein (AHRD V3.3 *-* AT5G18440.2) AT5G18440 Solyc01g096930.3 298 236 181 267 141 294 252 234 221 164 169 149 179 188 242 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A2G2YYQ8_CAPAN) AT5G04930 Solyc01g096940.4 385 1104 814 1355 1538 1502 1495 1632 1472 617 661 955 1086 1019 693 Protein kinase (AHRD V3.3 *** Q2HVC0_MEDTR) Solyc01g096950.4 347 492 474 421 528 562 560 568 486 361 424 483 479 452 456 WD40 repeat-containing protein (AHRD V3.3 *** A0A2U1MAJ5_ARTAN) AT3G21060 Solyc01g096960.3 306 317 861 851 416 407 423 304 479 632 928 390 255 447 808 Inactive protein RESTRICTED TEV MOVEMENT 2 (AHRD V3.3 *-* R4NRR6_9LAMI) Solyc01g096970.3 72 108 82 130 89 99 126 80 71 90 100 70 112 124 144 Unknown protein Solyc01g096980.2 166 122 331 407 204 223 224 103 142 212 584 149 95 226 310 Inactive protein RESTRICTED TEV MOVEMENT 2 (AHRD V3.3 *-* R4NRR6_9LAMI) Solyc01g096990.4 1449 1421 1380 1379 1462 1387 1450 1401 1561 1651 1584 1473 1665 1380 1649 Vacuolar protein sorting-associated protein 9A (AHRD V3.3 *** A0A1U8DTK0_CAPAN) AT3G19770 Solyc01g097000.3 218 879 1117 996 1430 1397 1298 1549 1350 614 845 1780 640 954 598 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A1P8B9U3_ARATH) AT5G04885 Solyc01g097010.3 8827 6411 5616 5338 5084 4658 4809 5334 4531 5650 4987 5740 6174 5542 5089 RNA-binding KH domain-containing protein (AHRD V3.3 *** A0A1I9LM90_ARATH) Solyc01g097020.4 741 1672 3158 3179 4173 4316 4758 2750 1533 1370 2837 1816 1897 1975 2429 succinate dehydrogenase subunit 8, mitochondrial (AHRD V3.3 *** XP_024440768.1) Solyc01g097030.3 1021 993 629 656 796 737 760 779 779 857 617 801 738 838 499 Transposase, MuDR, plant (AHRD V3.3 *** A0A1R3HNQ0_COCAP) AT1G49920 Solyc01g097040.4 235 209 193 165 204 199 221 212 267 175 210 217 117 156 217 Myosin-binding protein 1 (AHRD V3.3 *** A0A2G2W735_CAPBA) AT1G08800 Solyc01g097050.4 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 Alba DNA/RNA-binding protein (AHRD V3.3 *-* Q9SR12_ARATH) AT3G04620 Solyc01g097060.3 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 Jasmonate ZIM domain protein m (AHRD V3.3 *** I3WTB1_NICAT) Solyc01g097070.4 153 536 495 448 931 949 801 886 347 377 604 798 328 518 157 DNA topoisomerase (AHRD V3.3 *** A0A2G2W734_CAPBA) AT3G42860 Solyc01g097080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g097100.1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g097110.2 16 232 179 235 246 338 306 415 182 148 164 276 77 224 84 Fanconi anemia group D2 protein (AHRD V3.3 *** A0A1P8B4W1_ARATH) AT4G14970 Solyc01g097120.3 3238 3389 2925 2518 4000 3372 2894 3948 3074 3027 2968 3117 3473 2432 2427 Protein WVD2-like 1 (AHRD V3.3 *** A0A2G2W789_CAPBA) AT1G54460 Solyc01g097130.4 369 568 615 601 765 855 786 837 641 533 651 772 533 747 743 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A1U8DW27_CAPAN) AT3G62470 Solyc01g097140.4 276 334 374 322 392 369 394 281 272 269 333 267 401 402 552 Arsenate reductase 2.1 (AHRD V3.3 *** A0A2G3BTS9_CAPCH) AT5G03455 Solyc01g097150.4 795 270 476 362 208 354 317 196 274 303 566 308 211 365 505 Unknown protein Solyc01g097160.3 563 671 681 555 742 693 740 700 646 776 585 677 363 713 831 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A2K3P5V9_TRIPR) AT3G04650 Solyc01g097170.3 204 191 245 330 247 221 265 197 245 229 257 271 240 232 213 vitellogenin (AHRD V3.3 *** XP_010327627.1) Solyc01g097180.2 0 0 2 0 0 0 1 0 0 1 0 7 0 0 0 At3g04700 (AHRD V3.3 *** Q9SR04_ARATH) AT1G08790 Solyc01g097190.4 1081 1048 1282 750 846 822 901 889 900 700 701 782 1572 1215 802 Ankyrin-like protein (AHRD V3.3 *** Q8H9C2_SOLTU) AT3G04710 Solyc01g097200.1 187 83 25 53 6 0 3 3 19 7 8 5 66 57 47 Ankyrin-like protein (AHRD V3.3 *-* Q8H9C2_SOLTU) Solyc01g097220.3 29 23 4 18 4 5 6 2 9 10 22 34 26 50 99 Ankyrin repeat family protein (AHRD V3.3 *** A0A2U1L9Z0_ARTAN) Solyc01g097230.4 375 415 389 621 434 411 478 405 342 467 474 403 444 430 333 PRA1 family protein (AHRD V3.3 *-* A0A2G2YYQ3_CAPAN) Solyc01g097240.3 489 483 134 218 7 16 9 16 120 272 255 23 1384 890 386 Pathogenesis-related protein 4 (AHRD V3.3 *** I6VW44_CAPAN) Solyc01g097250.4 230 228 300 198 394 345 321 260 258 223 278 194 193 198 338 Myb/SANT-like DNA-binding domain protein (AHRD V3.3 *** F4JHK5_ARATH) AT4G02550 Solyc01g097260.4 229 138 146 155 53 82 93 77 77 116 159 109 136 131 151 Unknown protein Solyc01g097280.2 918 859 920 557 723 588 584 628 1363 1286 1006 659 1498 625 444 Pathogenesis-related protein 4b (AHRD V3.3 *** A0A0H3TYE5_CAPAN) AT3G04720 Solyc01g097290.4 1451 2984 2067 2449 3188 3152 3096 2549 3491 2066 4505 2219 2282 2188 3570 auxin-regulated IAA16 AT3G04730 Solyc01g097300.4 219 434 478 441 539 480 528 448 417 247 557 408 715 504 441 Prefoldin subunit 4 (AHRD V3.3 *** A0A200Q4E2_9MAGN) AT1G08780 Solyc01g097310.3 815 1510 1130 1271 1909 1497 1565 1842 1352 1407 1275 1599 1451 1279 873 Sec-independent protein translocase protein TATA, chloroplastic (AHRD V3.3 *** A0A2G2W7A7_CAPBA) AT5G28750 Solyc01g097320.3 1021 716 779 624 639 695 628 700 668 830 549 679 554 665 831 Mediator of RNA polymerase II transcription subunit 14 (AHRD V3.3 *** A0A2G2W775_CAPBA) AT3G04740 Solyc01g097330.3 1406 1166 1310 1037 1719 1441 1544 1550 1107 1231 1566 1028 1173 1020 994 Light-inducible protein CPRF2 (AHRD V3.3 *** A0A2G2W7C8_CAPBA) AT5G28770 Solyc01g097340.3 527 1622 742 1080 3691 3424 3394 3932 2138 1429 849 1513 1985 1197 1064 GDP-mannose-3',5'-epimerase (AHRD V3.3 *** A5JPK5_VITVI) AT5G28840 Solyc01g097350.4 1106 1021 2347 1303 1143 1071 1143 980 1231 1347 1645 1051 1279 1196 1589 Calcium-binding EF hand family protein (AHRD V3.3 *** F4KA19_ARATH) AT5G28830 Solyc01g097360.4 1419 1601 1664 1250 1659 1543 1461 1538 1081 1176 1410 1256 1401 1282 1353 hypothetical protein (AHRD V3.3 *-* AT1G47820.2) AT1G47820 Solyc01g097370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ammonium transporter (AHRD V3.3 *** A0A2G2YYT5_CAPAN) Solyc01g097380.2 44 24 39 33 10 9 3 8 7 25 31 9 143 38 71 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) Solyc01g097390.4 68 503 416 258 575 498 524 507 392 265 386 414 715 456 228 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) Solyc01g097400.1 3 36 34 7 36 19 23 26 11 18 24 12 10 36 0 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G2W783_CAPBA) Solyc01g097420.1 0 0 3 1 0 2 0 0 0 2 0 0 7 3 0 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G2W783_CAPBA) Solyc01g097430.4 2 8 8 12 6 4 2 5 9 4 22 18 11 0 2 ABC transporter (AHRD V3.3 *** A0A0M3R8G1_9SOLA) Solyc01g097440.3 1479 1188 1361 1378 1372 1304 1468 1247 1217 1229 1378 1031 1355 1417 1399 Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (AHRD V3.3 *** A0A2G2YYU8_CAPAN) AT5G49570 Solyc01g097450.3 444 887 1033 899 1076 1089 1091 994 816 583 811 882 1049 916 796 PITH domain-containing protein (AHRD V3.3 *** A0A1U8E514_CAPAN) AT3G04780 Solyc01g097460.3 471 1024 707 803 1018 1007 902 1318 968 1003 811 1125 812 842 666 Ribose 5-phosphate isomerase A (AHRD V3.3 *** A0A1Y1IHK3_KLENI) AT3G04790 Solyc01g097470.4 133 148 264 176 240 294 205 191 374 314 199 331 179 145 98 Neurogenic locus notch-like protein (AHRD V3.3 *** F4JIF2_ARATH) Solyc01g097480.1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 Protein IQ-domain 14-like (AHRD V3.3 *** A0A2K3MAI9_TRIPR) Solyc01g097490.1 0 1 0 4 1 0 3 0 1 2 0 3 2 0 0 SUN domain protein 4 Solyc01g097500.4 4125 5146 6483 5915 6796 7640 7318 6396 5631 5774 6753 6624 4562 5849 5734 LSTK-1-like kinase AT1G54510 Solyc01g097510.4 1126 825 1054 797 181 219 218 164 1533 1873 1883 1579 1249 1360 1732 annexin 3 AT2G38760 Solyc01g097520.4 3020 2669 3436 2416 695 790 737 703 5746 10218 7184 5657 3818 4188 7251 annexin 5 AT2G38750 Solyc01g097530.3 3 1 3 0 1 1 2 0 0 0 12 2 0 0 2 Photosystem II protein D1 (AHRD V3.3 *-* A0A2G2YJG5_CAPAN) Solyc01g097540.4 250 117 145 108 58 67 52 77 191 142 108 194 174 212 132 annexin 4 AT2G38760 Solyc01g097550.4 0 0 0 0 0 0 0 0 5 4 1 0 1 0 0 annexin 6 AT2G38750 Solyc01g097570.2 12 11 17 13 29 27 28 30 21 36 33 20 26 20 14 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 (AHRD V3.3 *-* A0A2G2W7B7_CAPBA) Solyc01g097580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor GTE12-like isoform X2 (AHRD V3.3 *-* A0A2I4E979_9ROSI) Solyc01g097600.2 858 1186 1282 1158 912 1042 1140 892 784 534 855 886 1338 1490 1223 Pseudouridine synthase family protein (AHRD V3.3 *-* A0A2U1NRB8_ARTAN) AT3G04820 Solyc01g097610.3 387 369 377 384 350 318 434 411 401 473 324 417 337 348 267 F-box domain-containing protein (AHRD V3.3 *** A0A2U1P7U7_ARTAN) Solyc01g097620.2 0 0 0 1 0 2 0 0 1 3 0 0 1 0 0 Ribosome biogenesis protein BMS1-like protein (AHRD V3.3 *-* A0A2G2W7A2_CAPBA) Solyc01g097630.3 281 83 79 110 57 43 31 22 51 86 43 41 43 49 94 F-box protein At5g07610-like (AHRD V3.3 *** A0A2I4F448_9ROSI) Solyc01g097640.3 1554 2152 1358 1199 1250 1333 1378 1433 1454 925 1148 1287 2594 2412 1542 Ribosome biogenesis protein BMS1-like protein (AHRD V3.3 *** A0A2G2YYU1_CAPAN) AT1G06720 Solyc01g097650.3 195 254 335 483 270 271 330 225 229 244 398 221 233 295 442 Serinc-domain containing serine and sphingolipid biosynthesis protein (AHRD V3.3 *** A0A2U1MZP6_ARTAN) AT4G13345 Solyc01g097660.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pectinesterase inhibitor-like (AHRD V3.3 *** A0A1U8H1H8_CAPAN) Solyc01g097670.4 40 66 88 56 80 65 82 68 56 40 38 82 92 109 42 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PUU8_9MAGN) AT3G49170 Solyc01g097680.2 0 4 0 0 3 2 0 1 0 1 1 0 1 0 0 Extensin-like protein Dif10 (AHRD V3.3 *-* Q43504_SOLLC) Solyc01g097690.2 1 2 16 29 0 3 20 6 3 8 1 12 8 13 13 Extensin-like protein Dif10 (AHRD V3.3 *-* Q43504_SOLLC) Solyc01g097700.1 1 4 0 7 0 2 2 0 2 0 2 3 1 2 0 Extensin-like protein Dif10 (AHRD V3.3 *-* Q43504_SOLLC) Solyc01g097710.1 117 105 195 981 85 126 306 167 111 170 245 166 136 302 211 Extensin-like protein Dif10 (AHRD V3.3 *-* Q43504_SOLLC) Solyc01g097720.1 55 120 92 352 109 119 264 161 62 109 151 107 98 92 58 Extensin-like protein Dif10 (AHRD V3.3 *-* Q43504_SOLLC) Solyc01g097730.4 478 382 360 424 364 433 455 367 396 306 336 333 404 434 486 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2W7A9_CAPBA) AT3G60050 Solyc01g097740.3 1321 2501 2137 2255 2557 2418 2618 2287 2137 1471 1916 1780 2335 2161 1967 ER membrane protein complex subunit 2 (AHRD V3.3 *** A0A2I4G7Y9_9ROSI) AT3G04830 Solyc01g097750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 (AHRD V3.3 *-* A0A2G2W7B7_CAPBA) Solyc01g097760.3 8824 18754 16349 12845 15272 16953 17035 14184 10071 9547 11628 11287 19910 17516 15207 60S ribosomal protein L7a (AHRD V3.3 *** A0A2G3DGL0_CAPCH) AT3G62870 Solyc01g097770.4 3832 2744 848 2216 1915 1689 1959 1929 2826 2598 1790 1280 1520 793 1620 phototropin 2 AT5G58140 Solyc01g097780.1 0 1 0 0 0 2 0 2 4 0 0 0 0 0 0 Bifunctional phosphatase IMPL2, chloroplastic (AHRD V3.3 *-* A0A2I0VW30_9ASPA) Solyc01g097790.3 203 160 182 213 204 213 204 163 220 161 265 155 212 227 169 DUF868 domain-containing protein (AHRD V3.3 *** A0A1Q3CLP0_CEPFO) AT5G28150 Solyc01g097800.3 1006 776 432 645 663 536 554 703 781 833 453 714 747 589 632 Ribose-5-phosphate isomerase B (AHRD V3.3 *-* A0A1Y6GMG3_RAOOR) AT3G04880 Solyc01g097810.3 883 881 753 769 862 902 824 1028 1205 1212 711 1042 934 721 706 zeta-carotene desaturase AT3G04870 Solyc01g097820.4 1452 825 962 1811 940 1125 1452 784 782 1117 1122 1067 729 1132 1247 Adenine phosphoribosyltransferase-like protein, putative (DUF2358) (AHRD V3.3 *** Q94K63_ARATH) AT3G04890 Solyc01g097830.2 23 23 77 29 6 10 7 11 29 23 111 3 9 22 13 DUF868 family protein (DUF868) (AHRD V3.3 *** Q9SI11_ARATH) Solyc01g097840.3 722 441 648 630 581 614 558 421 491 553 861 409 509 509 827 MAP kinase kinase kinase 6 AT3G04910 Solyc01g097850.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc01g097860.4 657 581 513 736 654 569 577 585 478 714 521 582 584 606 828 myelin-associated oligodendrocyte basic protein (AHRD V3.3 *-* AT1G54520.1) Solyc01g097870.3 2700 3571 4332 3311 3505 4397 3949 3246 2257 2288 3312 2738 4290 3749 4265 40S ribosomal protein S24 (AHRD V3.3 *** A0A2G3BTW2_CAPCH) AT3G04920 Solyc01g097880.4 420 460 727 555 673 603 544 635 938 722 754 717 613 567 563 tRNA-specific adenosine deaminase, chloroplastic (AHRD V3.3 *** A0A2I0WQV8_9ASPA) AT5G28050 Solyc01g097890.2 1456 950 813 955 895 841 892 972 1046 1409 769 1105 886 892 932 DNA-binding storekeeper transcriptional regulator (AHRD V3.3 *-* A0A2K3LQD1_TRIPR) AT3G04930 Solyc01g097900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g097910.2 1203 734 537 1487 1150 845 1142 1228 549 1542 794 983 409 600 416 Rubredoxin (AHRD V3.3 *** E5GBR8_CUCME) AT1G54500 Solyc01g097920.3 83 455 239 284 452 399 400 493 386 365 189 233 859 384 346 Cysteine synthase (AHRD V3.3 *** A0A1U8E591_CAPAN) Solyc01g097930.3 58 62 100 57 85 111 93 112 142 61 163 90 102 56 17 Cysteine synthase (AHRD V3.3 *** A0A2G3BTX8_CAPCH) Solyc01g097940.1 2 5 8 10 8 6 6 9 9 4 8 5 13 3 4 Cysteine synthase (AHRD V3.3 *-* A0A2G2W7S1_CAPBA) Solyc01g097950.3 1 9 23 34 3 2 0 7 3 5 0 8 3 0 3 Cysteine synthase (AHRD V3.3 *** A0A2G2YYZ2_CAPAN) Solyc01g097960.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 Late embryogenesis abundant protein D-34 (AHRD V3.3 *** A0A2G2W7N8_CAPBA) AT5G27980 Solyc01g097970.4 94 511 604 339 634 598 631 602 444 184 314 489 446 664 194 Deoxyuridine 5'-triphosphate nucleotidohydrolase (AHRD V3.3 *** A0A2G2W7R1_CAPBA) Solyc01g097980.3 1467 904 1045 782 575 582 581 599 758 1086 729 721 986 944 1104 CTR1-like protein kinase 2 AT1G08720 Solyc01g097990.3 7 14 22 18 31 28 26 24 26 15 22 19 28 28 2 N-acetyltransferase (AHRD V3.3 *-* A0A1W6AHU6_BACMY) Solyc01g098000.3 693 1590 1087 879 1233 851 975 1055 1102 707 636 750 1903 1510 1090 Elongation factor 1-delta (AHRD V3.3 *** A0A2G2XZA6_CAPAN) AT1G30230 Solyc01g098010.4 23 7 16 13 19 20 14 1 14 24 35 21 14 9 31 N-acetyltransferase (AHRD V3.3 *** A0A2N9Z4V7_PAEPO) AT3G22560 Solyc01g098020.2 250 156 131 100 47 38 48 60 109 145 131 71 197 127 173 N-acetyltransferase (AHRD V3.3 *** A0A2N9Z4V7_PAEPO) AT3G22560 Solyc01g098030.4 1637 1665 1286 1358 1080 1133 1248 1282 1224 1124 1244 1459 1750 1717 1184 Hydroxyproline-rich glycoprotein-like (AHRD V3.3 *** Q655Y7_ORYSJ) AT1G53645 Solyc01g098040.3 1468 1726 1621 1826 2339 2447 2163 2328 1775 1747 1689 1819 1391 1533 1368 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q9MAA9_ARATH) AT3G05100 Solyc01g098050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G3BTX0_CAPCH) Solyc01g098060.1 0 0 0 0 0 1 3 0 0 1 0 0 0 0 0 Agamous-like MADS-box protein AGL21 (AHRD V3.3 *** A0A2G2W7Q0_CAPBA) Solyc01g098070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL21 (AHRD V3.3 *** A0A2G2W7Q0_CAPBA) Solyc01g098080.3 291 312 502 425 474 616 553 430 345 204 495 310 239 318 509 BY-2 kinesin-like protein 5 (AHRD V3.3 *** Q9AVP5_TOBAC) AT5G27950 Solyc01g098090.3 1151 1177 973 1040 846 992 1027 1047 1066 994 937 855 1149 1182 1250 meloidogyne-induced giant cell protein DB214 AT3G05090 Solyc01g098100.2 314 779 589 377 410 527 411 389 457 292 334 457 1138 780 526 60S ribosome subunit biogenesis protein NIP7 homolog (AHRD V3.3 *** A0A1U8E5A6_CAPAN) AT4G15770 Solyc01g098110.4 5991 2316 3240 7310 594 544 720 488 1940 5137 7463 1701 1926 3402 6328 Acyltransferase-like protein, chloroplastic (AHRD V3.3 *** A0A2G3BTU6_CAPCH) AT1G54570 Solyc01g098120.2 2 5 2 1 0 0 2 2 2 0 0 0 0 3 0 Unknown protein Solyc01g098130.2 1 0 0 0 0 0 2 0 0 3 0 0 0 0 1 Unknown protein Solyc01g098140.4 18 15 6 10 27 8 15 15 12 20 2 8 5 1 18 Alpha/beta-hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LX98_ARTAN) Solyc01g098150.3 269 298 335 259 174 201 188 133 220 161 185 170 280 312 244 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2YZ45_CAPAN) AT5G03800 Solyc01g098160.3 2522 2707 2533 2431 2713 2829 2832 2876 2923 2117 2398 2558 3034 2889 2869 Cyclin-dependent kinase C-2 (AHRD V3.3 *** A0A1U8DWE8_CAPAN) AT1G54610 Solyc01g098170.3 1214 1337 1286 1497 1345 1559 1434 1302 1301 1002 1207 1228 1245 1414 1288 Protein HASTY 1 (AHRD V3.3 *** A0A2G2W7K8_CAPBA) AT3G05040 Solyc01g098180.3 1725 1506 1532 1492 1280 1480 1323 1224 1254 1259 1348 1281 1306 1550 1875 translation initiation factor eIF-2B subunit epsilon isoform X1 (AHRD V3.3 *** A0A2I4F1W2_9ROSI) AT2G34970 Solyc01g098190.3 12849 4197 4885 5580 1776 2012 2373 1405 3656 6595 6499 3361 5924 5018 8164 (Sodium/potassium)/proton exchanger 4 AT3G05030 Solyc01g098200.3 266 345 349 364 359 394 353 377 444 326 492 411 416 376 332 Vesicle-associated protein 1-2 (AHRD V3.3 *** A0A2G2YZ23_CAPAN) Solyc01g098210.3 224 177 177 136 162 128 117 142 150 239 141 187 142 126 140 transmembrane protein adipocyte-associated 1-like (AHRD V3.3 *** A0A2I4GNC8_9ROSI) AT3G05010 Solyc01g098220.2 10 0 0 0 0 0 2 0 1 0 0 0 0 0 0 LOB domain-containing protein 20 (AHRD V3.3 *** A0A2G3BU77_CAPCH) AT3G03760 Solyc01g098230.3 605 699 513 383 474 439 462 433 511 383 458 379 927 603 556 Mitochondrial import inner membrane translocase subunit TIM44-2 (AHRD V3.3 *** A0A2G2W7N1_CAPBA) AT2G36070 Solyc01g098240.3 139 147 226 128 198 277 273 164 163 94 161 183 134 220 232 FRIGIDA-like protein (AHRD V3.3 *** A0A2G3BU64_CAPCH) Solyc01g098250.4 1631 1445 1298 1184 1373 1539 1405 1384 1464 1308 1181 1309 1236 1457 1023 DnaJ domain-containing protein (AHRD V3.3 *** A0A2U1PTF5_ARTAN) AT5G27240 Solyc01g098260.1 42 29 44 71 62 52 44 38 25 47 38 53 23 31 14 Unknown protein Solyc01g098270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 Chaperone protein DnaJ (AHRD V3.3 *-* A0A2G2W7P0_CAPBA) Solyc01g098280.4 0 0 3 9 0 6 0 4 1 0 0 1 0 0 12 DNAJ heat shock N-terminal domain-containing protein (AHRD V3.3 *-* F4K2V2_ARATH) AT5G18720 Solyc01g098290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g098300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNAJ heat shock N-terminal domain-containing protein (AHRD V3.3 *-* Q3E9D9_ARATH) AT5G18720 Solyc01g098310.3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 DnaJ heat shock amino-terminal domain protein (AHRD V3.3 *-* A0A2K3PM75_TRIPR) AT5G18720 Solyc01g098320.4 533 796 646 575 1375 1001 1046 1289 834 633 726 1129 1007 933 369 DNA-directed RNA polymerase V subunit 5A (AHRD V3.3 *** A0A1U8GKX3_CAPAN) AT3G57080 Solyc01g098330.1 21 9 12 24 17 16 21 29 14 6 33 8 28 21 13 DnaJ heat shock amino-terminal domain protein (AHRD V3.3 *-* A0A2K3MU01_TRIPR) AT5G18720 Solyc01g098340.3 991 683 856 766 981 1048 933 1118 897 904 904 930 599 865 984 DnaJ domain (AHRD V3.3 *** A0A200QQ07_9MAGN) AT5G18720 Solyc01g098350.3 1236 1169 1020 1032 936 1124 1127 913 987 817 844 960 1207 1224 1004 L1_1 AT2G26430 Solyc01g098360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8F9E2_CAPAN) Solyc01g098370.1 7 4 3 2 0 0 0 0 6 1 2 0 3 5 0 receptor-like protein 12 (AHRD V3.3 *** A0A1U8F9E2_CAPAN) AT1G47890 Solyc01g098380.4 308 1048 915 778 1370 1410 1283 1468 935 576 677 1112 1091 1090 915 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like (AHRD V3.3 *** A0A1U8FAN3_CAPAN) AT2G44040 Solyc01g098390.3 1988 944 854 835 453 708 658 635 750 1025 834 765 846 888 896 Gibberellin receptor (AHRD V3.3 *** E3VJP7_9FABA) AT5G27320 Solyc01g098400.3 1949 1033 1170 1268 273 276 203 227 2400 2177 1628 694 1520 1080 1301 Histidine phosphotransfer protein (AHRD V3.3 *** A0A0A1WCB7_NICAT) Solyc01g098410.4 820 339 288 222 88 74 47 66 302 214 737 139 165 208 289 Lyk13 (AHRD V3.3 *** G3KGB4_SOLLC) Solyc01g098420.3 10 0 21 1 6 2 5 0 7 4 17 0 10 4 2 Chitin elicitor receptor kinase 1 (AHRD V3.3 *-* A0A2G2YZ64_CAPAN) Solyc01g098430.3 1074 788 824 863 809 874 857 844 977 1188 968 819 958 812 749 Autophagy-related protein 18h (AHRD V3.3 *** A0A2G3BUA1_CAPCH) AT1G54710 Solyc01g098440.3 1 9 12 4 0 4 4 3 9 11 7 14 28 5 17 Receptor-like cytosolic serine/threonine-protein kinase RBK2 (AHRD V3.3 *** A0A2G2YZ52_CAPAN) AT3G05140 Solyc01g098450.4 421 334 175 283 197 168 200 255 285 276 155 198 168 277 221 TATA box-binding protein associated factor RNA polymerase I subunit C (AHRD V3.3 *** AT3G18310.1) AT3G18310 Solyc01g098460.4 1725 1062 1387 1415 1063 1325 1287 962 990 1125 1157 979 895 1070 1607 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase (AHRD V3.3 *** A0A2G2W7J1_CAPBA) AT2G21070 Solyc01g098470.2 5 16 29 26 38 15 33 21 6 13 30 9 17 30 15 Unknown protein Solyc01g098480.3 34 46 52 48 45 61 51 51 35 24 24 34 63 73 54 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2YZ86_CAPAN) AT2G21090 Solyc01g098490.3 21 9 27 11 18 18 13 14 5 7 1 6 17 13 20 Sugar facilitator protein 1 Solyc01g098500.3 1097 1465 1571 1884 2616 2468 2739 2160 1644 1525 1594 1377 1794 1267 2115 Sugar facilitator protein 5 Solyc01g098520.3 56 40 218 74 62 59 38 39 25 99 79 45 32 48 47 MUTL protein homolog 3 (AHRD V3.3 *-* AT4G35520.6) Solyc01g098530.3 6 7 18 7 19 12 9 5 2 36 33 4 3 12 19 CTP synthase (AHRD V3.3 *-* A0A2G3A9D9_CAPAN) Solyc01g098540.3 179 61 95 91 50 59 74 27 71 99 65 63 110 82 102 sec-independent translocase TatB-like protein isoform X1 (AHRD V3.3 *-* XP_006588656.1) Solyc01g098550.3 398 843 665 739 992 793 815 891 852 586 571 664 825 724 459 Tryptophan synthase alpha chain (AHRD V3.3 *** A0A2G2W7K5_CAPBA) AT4G02610 Solyc01g098555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g098560.3 371 454 269 340 644 631 610 527 653 381 456 614 318 397 420 Sugar facilitator protein 8 AT1G54730 Solyc01g098570.2 54 74 10 14 6 28 18 10 20 3 5 13 18 8 27 FANTASTIC four-like protein (DUF3049) (AHRD V3.3 *-* F4HX10_ARATH) Solyc01g098580.3 208 479 487 428 511 438 473 655 538 429 438 670 250 353 266 Phosphoglycerate mutase-like protein AT74H (AHRD V3.3 *** A0A2G3BUB5_CAPCH) AT3G05170 Solyc01g098590.3 889 286 533 301 25 60 25 34 253 615 941 145 298 308 537 Phosphoglycerate mutase-like protein AT74 (AHRD V3.3 *** A0A2G2YZL9_CAPAN) Solyc01g098600.3 189 237 270 244 289 324 258 298 201 206 209 265 202 234 286 Transmembrane protein, putative (DUF1068) (AHRD V3.3 *** F4ITS6_ARATH) Solyc01g098610.4 1064 1102 1213 1107 1106 1028 1114 1202 1281 1231 1010 1102 1354 1259 1276 glutathione synthetase 2 AT5G27380 Solyc01g098620.2 13 18 38 27 17 20 15 7 12 30 87 8 7 23 57 Unknown protein Solyc01g098630.3 313 309 338 221 167 152 181 161 164 114 207 199 386 414 411 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein (AHRD V3.3 *** B3H4A1_ARATH) AT5G27395 Solyc01g098640.3 505 690 591 731 1136 758 984 989 795 810 685 893 498 514 820 UPF0603 protein, chloroplastic (AHRD V3.3 *** A0A1U8E5D6_CAPAN) AT1G54780 Solyc01g098650.2 236 283 389 331 303 316 265 280 454 250 450 235 284 227 461 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3BUB9_CAPCH) AT1G54790 Solyc01g098660.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g098670.3 0 1 18 1 4 1 3 6 14 6 0 4 3 13 8 Kinesin-like protein (AHRD V3.3 *** A0A1Q3B5J7_CEPFO) AT3G63480 Solyc01g098680.2 0 0 0 0 0 0 5 3 0 0 0 5 0 0 0 Receptor-like protein 12 (AHRD V3.3 *** A0A1J6JWI2_NICAT) Solyc01g098690.2 98 170 214 107 69 104 112 133 146 110 161 113 92 96 111 Receptor-like protein 12 (AHRD V3.3 *** A0A1J6JWI2_NICAT) Solyc01g098700.4 605 581 483 483 548 485 480 708 779 659 558 638 753 581 621 Branched-chain-amino-acid aminotransferase-like protein 1 (AHRD V3.3 *** A0A2G2W7E2_CAPBA) AT3G05190 Solyc01g098710.3 1016 620 849 763 270 325 390 328 450 720 699 482 962 734 549 aspartic proteinase-like protein 2 (AHRD V3.3 *** A0A1S4CMW0_TOBAC) AT5G43100 Solyc01g098720.3 6 186 127 219 139 132 142 142 219 87 168 82 130 111 40 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1PAJ2_ARTAN) Solyc01g098730.2 48 30 36 20 17 14 19 11 13 31 33 16 43 33 17 Unknown protein Solyc01g098740.4 68 107 190 316 69 80 88 107 117 212 240 276 72 138 221 Protein kinase superfamily protein (AHRD V3.3 *** F4HYK7_ARATH) AT1G54820 Solyc01g098750.3 304 262 308 514 134 169 170 126 236 542 334 203 242 260 179 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1KJJ9_ARTAN) AT3G06140 Solyc01g098760.4 3530 3266 3870 3398 2397 2546 2214 2574 5559 4116 5100 4133 5927 4658 5589 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6PK24_ACTCH) Solyc01g098770.1 182 77 31 45 29 24 8 49 44 80 15 67 28 36 26 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1M5P2_ARTAN) Solyc01g098780.3 1159 1550 1482 1141 1421 1482 1356 1347 1487 1220 1365 1480 1820 1553 1459 Signal peptidase complex subunit 3 (AHRD V3.3 *** A0A2G2XZA0_CAPAN) AT5G27430 Solyc01g098790.2 297 102 58 69 47 42 37 44 113 174 86 118 87 69 117 Alpha-crystallin domain-containing protein 22.3 (AHRD V3.3 *** A0A2G2XZ98_CAPAN) AT1G54840 Solyc01g098800.4 284 416 750 582 395 487 510 440 363 633 667 433 305 406 370 Cation/calcium exchanger 5 (AHRD V3.3 *** A0A2G3BUD8_CAPCH) AT1G08960 Solyc01g098810.4 276 636 570 607 633 795 671 633 397 348 496 544 557 615 395 Alpha-crystallin domain-containing protein 22.3 (AHRD V3.3 *** A0A1U8E442_CAPAN) AT1G54850 Solyc01g098820.3 220 111 34 61 11 11 12 5 48 54 42 29 140 86 55 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A1P8BAS4_ARATH) Solyc01g098830.3 345 258 374 403 225 316 340 234 260 317 357 294 254 344 435 RING/U-box superfamily protein (AHRD V3.3 *** AT3G05250.1) AT3G05250 Solyc01g098840.3 1514 1354 1224 1192 1137 1292 1202 1059 1671 1922 1673 1980 1196 1499 1292 Mevalonate kinase (AHRD V3.3 *** A0A2G3BUF3_CAPCH) AT5G27450 Solyc01g098850.3 0 0 3 0 4 0 0 0 5 0 2 0 0 2 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A1P8AU36_ARATH),Pfam:PF13561 AT1G54870 Solyc01g098860.3 13 2 0 1 12 6 4 2 4 9 16 1 8 0 6 Glycoprotein membrane GPI-anchored (AHRD V3.3 *** A0A2U1LIH4_ARTAN) Solyc01g098870.3 1219 1578 1656 1695 1584 1878 1900 1794 1841 1344 1490 1468 1451 1675 1661 hypothetical protein (AHRD V3.3 *-* AT1G54920.2) AT1G54920 Solyc01g098880.3 1671 2779 2237 1471 2067 1794 1777 2010 1827 1375 1726 1688 3453 2595 1830 serine--tRNA ligase-like (AHRD V3.3 *** A0A2I4DVH0_9ROSI) AT5G27470 Solyc01g098890.1 4 0 0 8 0 0 0 0 0 1 5 0 0 0 32 CLE protein 2 Solyc01g098900.3 370 814 534 553 770 724 698 771 669 542 510 670 780 536 422 Protein YIPF (AHRD V3.3 *** A0A1U8DU83_CAPAN) AT5G27490 Solyc01g098910.3 190 144 286 201 161 168 171 151 147 189 232 123 146 129 106 Peroxisomal adenine nucleotide carrier 1 (AHRD V3.3 *** A0A1U8DU94_CAPAN) Solyc01g098920.4 6187 3902 3031 3296 2793 3028 3025 3113 3167 3566 2598 3509 3034 3399 3300 Mitochondrial Rho GTPase (AHRD V3.3 *** A0A2G2XZV8_CAPAN) AT5G27540 Solyc01g098930.3 61 79 135 100 63 103 127 78 103 55 89 75 100 74 105 cyclinU3_2 AT3G63120 Solyc01g098940.3 10 71 98 78 298 262 288 239 107 74 103 170 7 29 36 Pectinesterase (AHRD V3.3 *** A0A2G2Y083_CAPAN) AT3G10720 Solyc01g098950.3 127 48 13 78 16 21 14 7 29 57 54 45 27 55 124 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A2G3C9S8_CAPCH) Solyc01g098960.3 0 0 0 0 0 0 1 0 0 3 0 5 3 0 0 Hexosyltransferase (AHRD V3.3 *** A0A2G3BUG9_CAPCH) AT1G54940 Solyc01g098970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Hexosyltransferase (AHRD V3.3 *** A0A2G3BUG7_CAPCH) AT1G54940 Solyc01g098980.4 267 2090 2304 3029 4602 5327 5072 5075 2158 1252 2779 2946 475 1408 1334 MAP kinase kinase kinase 8 Solyc01g098990.4 459 608 524 531 726 855 838 746 668 461 562 583 371 495 582 DUF1995 domain protein%2C putative (DUF1995) (AHRD V3.3 *** AT5G27560.4) AT5G27560 Solyc01g099000.1 35 50 53 50 36 54 63 49 52 29 28 41 65 85 45 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8DU99_CAPAN) AT3G05340 Solyc01g099010.3 42 34 11 39 17 38 28 32 13 9 0 25 20 13 9 GDSL esterase/lipase At5g03980-like (AHRD V3.3 *** A0A1U8DUA9_CAPAN) Solyc01g099020.3 2 48 44 72 6 5 17 6 17 15 20 9 11 7 10 GDSL esterase/lipase (AHRD V3.3 *** A0A199UFA2_ANACO) Solyc01g099030.4 8 87 17 49 66 61 92 71 71 79 14 51 56 67 41 GDSL esterase/lipase At5g03980-like (AHRD V3.3 *** A0A1U8DUA9_CAPAN) Solyc01g099035.1 9 3 0 1 1 1 3 0 1 5 2 0 2 1 0 Unknown protein Solyc01g099040.4 1 0 0 0 0 7 3 0 0 0 0 0 0 1 0 GDSL esterase/lipase (AHRD V3.3 *** A0A199UFA2_ANACO) Solyc01g099045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g099050.3 4 3 11 3 0 1 2 0 8 1 1 2 6 0 0 GDSL esterase/lipase At5g03980-like (AHRD V3.3 *** A0A1U8DUA9_CAPAN) Solyc01g099060.3 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 GDSL esterase/lipase (AHRD V3.3 *** A0A199UFA2_ANACO) Solyc01g099070.1 0 3 10 0 0 2 6 0 1 5 0 1 0 8 0 GDSL esterase/lipase (AHRD V3.3 *-* A0A1D1YZ75_9ARAE) Solyc01g099080.4 61 10 18 5 10 11 18 2 11 11 19 17 22 8 17 GDSL esterase/lipase (AHRD V3.3 *** A0A199UFA2_ANACO) Solyc01g099090.3 3432 2461 2895 3200 3558 3725 3673 3572 4241 3315 3269 3674 2136 3004 3839 Mannosylglycoprotein endo-beta-mannosidase (AHRD V3.3 *** A0A2G2Y0C1_CAPAN) AT1G09010 Solyc01g099100.4 1317 1127 945 1180 1280 1230 1236 1367 1318 1236 1475 1285 1173 1268 1357 Long-chain acyl-CoA synthetase 6 (AHRD V3.3 *** A0A2U1MVC5_ARTAN) AT3G05970 Solyc01g099110.4 823 544 472 569 647 600 740 670 747 781 553 588 449 620 601 Xaa-Pro aminopeptidase (AHRD V3.3 *** A0A2I0XJM9_9ASPA) AT3G05350 Solyc01g099120.4 1082 1393 1420 1519 1847 1399 1395 1857 1126 1393 1187 1564 1266 1639 1078 Protein AUXIN RESPONSE 4 (AHRD V3.3 *-* A0A2G2Y0B6_CAPAN) AT1G54990 Solyc01g099130.3 1511 1005 526 775 728 734 758 840 888 1144 663 768 705 585 612 LysM domain-containing protein/F-box-like domain-containing protein (AHRD V3.3 *** A0A1Q3B5K4_CEPFO) AT1G55000 Solyc01g099140.4 323 343 366 315 376 434 383 434 320 337 337 337 350 332 267 Vacuole membrane protein KMS1 (AHRD V3.3 *** A0A2G2Y0A8_CAPAN) Solyc01g099150.5.1 12 8 6 4 0 2 4 5 8 34 7 7 2 1 1 Lipoxygenase (AHRD V3.3 *** K4B0V2_SOLLC) Solyc01g099160.4 1294 854 464 377 268 202 175 221 670 899 329 473 717 596 715 lipoxygenase AT1G55020 Solyc01g099170.4 1 0 1 0 0 0 0 0 0 3 2 4 0 4 1 Lipoxygenase (AHRD V3.3 *-* M1CAP3_SOLTU) Solyc01g099190.4 1 0 0 3 0 0 0 0 0 2 0 0 0 1 0 lipoxygenase B AT1G55020 Solyc01g099200.3 2 1 0 3 4 8 4 1 5 0 1 6 9 0 0 Lipoxygenase (AHRD V3.3 *** K4B0V7_SOLLC) Solyc01g099210.3 151 125 232 186 71 72 93 64 195 119 133 196 188 243 134 Lipoxygenase (AHRD V3.3 *** K4B0V8_SOLLC) Solyc01g099220.3 1033 673 546 571 524 442 558 493 613 540 435 524 675 751 770 DNA polymerase (AHRD V3.3 *** A0A2G3AW20_CAPCH) AT1G67500 Solyc01g099230.3 875 705 593 529 382 403 466 353 487 383 515 515 644 783 741 Zinc finger protein VAR3, chloroplastic (AHRD V3.3 *-* A0A1J3GSM9_NOCCA) AT1G55040 Solyc01g099240.4 696 881 745 810 847 829 794 1007 998 1123 748 1095 848 688 706 2-hydroxy-3-oxopropionate reductase (AHRD V3.3 *** A0A2Z5T525_9BACI) AT4G29120 Solyc01g099250.3 8 9 5 9 1 17 9 7 6 0 8 2 1 0 8 LRR receptor-like serine/threonine-protein kinase GSO2 (AHRD V3.3 *** A0A1U8DUC7_CAPAN) Solyc01g099260.3 391 270 267 539 310 242 194 211 352 284 248 189 297 290 678 Chaperone protein DnaJ (AHRD V3.3 *** A0A1J3IQ23_NOCCA) AT3G05345 Solyc01g099270.2 147 679 744 1105 1829 1732 1818 1689 754 611 908 1038 122 470 542 Microtubule-binding protein TANGLED1 (AHRD V3.3 *** A0A2G2Y0A3_CAPAN) AT3G05330 Solyc01g099280.3 740 1092 1164 1308 1265 1475 1593 1292 912 945 1109 1152 1158 1340 1059 Sucrose nonfermenting 4-like protein (AHRD V3.3 *** A0A1U8DUB7_CAPAN) AT1G09020 Solyc01g099290.3 224 412 630 515 426 357 421 327 516 399 451 529 434 620 596 Cullin (AHRD V3.3 *** A0A2U1PNZ9_ARTAN) AT1G59790 Solyc01g099300.3 1124 974 1047 1069 991 1028 1044 1004 935 885 1038 1002 894 1183 1207 ATPase, histidine kinase, DNA gyrase B-, and HSP90-like domain containing protein, expressed (AHRD V3.3 *** Q33AG5_ORYSJ) AT1G19100 Solyc01g099310.4 127 164 224 232 231 267 216 176 207 130 190 184 239 258 230 cyclinH1_1 AT5G27620 Solyc01g099320.4 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B-4 (AHRD V3.3 *** A0A1U8DWS7_CAPAN) AT1G09030 Solyc01g099340.3 279 161 159 192 207 163 237 172 174 194 184 120 182 148 386 Protein indeterminate-domain 12 (AHRD V3.3 *** A0A2G2W7U4_CAPBA) Solyc01g099350.3 622 1177 1088 910 1187 1177 1345 1104 1096 777 968 863 1459 1363 1107 Acyl-CoA-binding domain-containing protein 4 (AHRD V3.3 *** A0A2G2Y0B8_CAPAN) AT3G05420 Solyc01g099360.3 3152 2349 2560 2425 2193 2518 2648 2155 1685 2171 1990 2029 2298 2664 2399 Tudor/PWWP/MBT superfamily protein (AHRD V3.3 *-* F4K4D6_ARATH) AT5G27650 Solyc01g099370.3 2316 1050 2804 419 139 103 68 117 297 661 2859 420 799 640 1508 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* F4JK83_ARATH) AT1G09070 Solyc01g099380.4 304 137 249 231 167 205 225 140 194 169 249 240 188 259 323 SART-1 protein (AHRD V3.3 *** A0A200QRF5_9MAGN) AT3G14700 Solyc01g099400.4 3246 1235 944 1186 727 779 694 856 934 2393 960 1189 951 1006 911 WD-40 repeat containing protein (AHRD V3.3 *** A0A0K0XR34_TOBAC) Solyc01g099410.3 421 5166 5830 5845 8338 8106 7498 9686 3600 4237 4498 8207 1559 4716 2058 Histone H2A (AHRD V3.3 *** A0A0H5QLQ1_9EUKA) AT5G27670 Solyc01g150150.1 3 12 3 7 7 0 11 9 14 8 2 3 3 7 8 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G2XW06_CAPAN) Solyc01g099420.3 7 1 4 7 0 0 2 0 1 0 0 0 1 2 6 Unknown protein Solyc01g099440.4 20 12 64 28 16 22 30 12 19 20 44 21 23 29 15 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G2XW06_CAPAN) Solyc01g099450.4 1 14 29 17 23 10 12 9 16 3 17 4 4 6 10 ATP-dependent DNA helicase Q-like SIM isoform X5 (AHRD V3.3 *-* XP_025888467.1) Solyc01g099460.3 103 170 73 126 194 193 215 299 180 141 107 161 111 193 126 ATP-dependent DNA helicase (AHRD V3.3 *** A0A2G2XW06_CAPAN) AT5G27680 Solyc01g099470.3 71 114 97 128 147 219 249 139 122 59 197 117 146 155 108 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G2XW06_CAPAN) Solyc01g099480.4 1 4 5 5 1 5 2 0 0 3 0 0 0 0 0 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G2XW06_CAPAN) Solyc01g099490.1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G2XW06_CAPAN) Solyc01g099500.1 15 12 27 14 21 21 10 12 9 11 1 8 8 7 8 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G2XW06_CAPAN) Solyc01g099510.2 8 0 2 5 0 2 3 1 1 0 8 0 0 0 0 Unknown protein Solyc01g099520.3 342 578 998 556 612 630 488 359 550 461 1571 424 530 446 709 Rapid alkalinization factor (AHRD V3.3 *** RALF_TOBAC) AT4G15800 Solyc01g099530.3 107 123 99 117 106 135 165 130 154 86 73 134 48 104 119 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1N811_ARTAN) AT5G14770 Solyc01g099540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NTM19 protein (AHRD V3.3 *** O24140_TOBAC) Solyc01g099560.3 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 (+)-neomenthol dehydrogenase-like (AHRD V3.3 *** A0A2I4G5H1_9ROSI) Solyc01g099565.1 1 0 1 2 0 0 0 1 2 0 0 0 2 1 4 Unknown protein Solyc01g099570.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Desiccation-related protein PCC13-62 (AHRD V3.3 *-* A0A2G2W7R3_CAPBA) Solyc01g099580.3 5 13 56 46 209 209 183 176 23 16 42 6 27 35 20 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *-* Q9ZUW8_ARATH) Solyc01g099590.4 71 66 54 91 177 131 125 103 44 76 100 38 77 61 80 glutathione-S-transferase Solyc01g099600.4 5697 6682 5001 4946 8721 7694 6999 8207 5862 5518 4699 6476 9845 6030 3955 heavy metal-associated isoprenylated plant protein 3-like (AHRD V3.3 *** A0A1S3XS77_TOBAC) AT1G56210 Solyc01g099620.3 4 4 2 6 9 11 10 25 6 5 9 10 3 6 9 Respiratory burst oxidase-like protein (AHRD V3.3 *** C1IHQ9_9ROSI) AT1G09090 Solyc01g099630.4 378 3779 3316 4156 5715 5428 5590 5321 3788 2135 2621 3020 2519 3502 3019 xyloglucan endotransglucosylase-hydrolase 1 Solyc01g099640.4 163 154 181 205 124 151 172 129 134 136 182 111 142 167 172 Unknown protein Solyc01g099650.3 169 609 1131 1190 1474 1345 1406 1512 1502 682 1162 1906 733 833 853 Formin-like protein (AHRD V3.3 *** A0A2G3AXK0_CAPCH) AT3G05470 Solyc01g099660.4 42 9 33 8 1 7 2 7 18 23 31 11 48 54 49 Heat shock protein 70 family (AHRD V3.3 *** A0A200QCN5_9MAGN) Solyc01g099670.3 9532 16002 14435 11666 13432 14245 15239 12482 9368 9057 10941 10974 17648 15623 12983 meloidogyne-induced giant cell protein db212 AT4G25740 Solyc01g099680.3 3465 2407 2720 1517 1479 1265 1140 1583 2197 2977 2547 2141 3476 2174 1840 Rubber elongation factor (AHRD V3.3 *** A0A2U1LDB4_ARTAN) AT3G05500 Solyc01g099690.3 3532 2950 2092 2142 2605 2288 2188 2664 2507 2728 1955 2440 2892 2518 2344 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A1U8E4F5_CAPAN) AT1G09130 Solyc01g099700.3 1013 1009 1063 1214 1209 1319 1425 1391 937 1479 1092 1083 1442 1353 884 T-box protein (AHRD V3.3 *** AT5G27710.1) AT5G27710 Solyc01g099710.4 952 841 767 918 798 997 1063 832 820 925 872 806 991 871 925 Tafazzin family protein (AHRD V3.3 *** A0A2G2W842_CAPBA) AT3G05510 Solyc01g099720.2 615 884 1071 1019 1336 1446 1434 1284 918 765 957 988 698 863 812 F-actin-capping protein subunit alpha (AHRD V3.3 *** A0A2G2XXJ8_CAPAN) AT3G05520 Solyc01g099730.3 369 357 378 268 201 250 249 225 245 222 293 191 299 300 384 transmembrane protein (AHRD V3.3 *** AT2G41945.2) AT2G41945 Solyc01g099740.4 530 630 769 576 751 687 692 795 613 528 703 579 792 625 764 U6 snRNA-associated Sm-like protein LSm4 (AHRD V3.3 *-* A0A328E599_9ASTE) AT5G27720 Solyc01g099750.2 246 215 193 223 250 177 241 170 192 204 120 193 77 149 210 Heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) (AHRD V3.3 *** Q94CC1_ARATH) AT5G27730 Solyc01g099760.3 7944 6607 6026 5382 5157 5291 5269 5450 6202 5907 5251 5512 7586 6718 6588 LeMA-1 putatve Mg-dependent ATPase 1 AT3G05530 Solyc01g099770.3 52957 47025 50221 53753 46968 55064 49332 38058 33397 40011 48820 39354 45927 42785 57669 meloidogyne-induced giant cell protein DB141 AT3G16640 Solyc01g099780.3 165 186 151 231 127 124 132 81 75 127 107 94 347 192 211 Translationally controlled tumor protein (AHRD V3.3 *** U3SXQ9_NICBE) AT3G16640 Solyc01g099790.3 2774 2674 2722 3200 2887 3020 2820 2931 2678 3438 2420 2382 2731 2860 2346 RING/U-box superfamily protein (AHRD V3.3 *-* A0A0U9HU46_KLENI) AT3G05545 Solyc01g099800.4 1009 304 531 412 149 160 195 116 209 318 395 209 333 479 913 Unknown protein Solyc01g099810.3 1855 749 597 591 318 222 262 288 556 783 420 603 822 805 759 Serine/arginine-rich-splicing factor SR34 (AHRD V3.3 *-* A0A0M9UMW1_NICAT) AT1G09140 Solyc01g099820.3 20 90 107 85 115 150 112 89 72 66 87 87 61 70 80 Hypoxia-responsive family protein (AHRD V3.3 *** Q8LG60_ARATH) Solyc01g099830.3 3592 6611 6639 4724 6551 6221 6196 5854 4044 3573 5105 4688 6805 5960 5277 60S ribosomal protein L22 (AHRD V3.3 *** A0A1Y1HUA2_KLENI) AT5G27770 Solyc01g099840.3 9681 2568 1374 2804 386 540 410 331 1507 3574 1484 1138 2615 2910 5053 Dormancy/auxin associated protein (AHRD V3.3 *** A0A2K3MXX9_TRIPR) AT1G56220 Solyc01g099850.3 437 338 349 307 336 345 360 337 299 334 397 337 474 373 269 Folate receptor-like (AHRD V3.3 *** A0A200PWQ4_9MAGN) AT5G27830 Solyc01g099860.3 354 269 229 228 328 320 313 285 272 276 236 213 254 217 191 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A1U8DUK9_CAPAN) AT3G05580 Solyc01g099870.3 25 199 46 46 185 198 203 174 379 364 410 393 100 45 23 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A1U8DUK6_CAPAN) AT3G16690 Solyc01g099880.4 210 69 23 43 65 51 44 64 125 168 102 148 37 73 188 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A1U8E5W8_CAPAN) Solyc01g099890.3 402 983 1454 1114 1513 1902 1649 1285 849 787 1098 1114 1148 1257 1050 Translation machinery-associated protein 20 (AHRD V3.3 *** U9U144_RHIID) AT1G09150 Solyc01g099900.4 11869 17999 17188 12339 16377 17011 15878 16184 11570 10199 12980 12612 19567 18716 17262 60S ribosomal protein L18, putative, expressed (AHRD V3.3 *** Q10LN7_ORYSJ) AT3G05590 Solyc01g099910.4 77 145 135 110 127 99 130 131 103 142 79 129 77 119 24 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9M9W5_ARATH) AT3G05600 Solyc01g099920.4 2 0 3 1 8 4 4 0 3 2 1 1 0 3 0 PAR1-like protein (AHRD V3.3 *** A0A2U1KIG3_ARTAN) Solyc01g099930.3 2289 1368 2127 1826 1305 1680 1730 1165 1301 1264 2102 1420 1432 1707 2249 hypothetical protein (AHRD V3.3 *-* AT5G27860.2) AT5G27860 Solyc01g099940.3 0 3 10 0 0 0 4 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G2XYC5_CAPAN) Solyc01g099950.1 0 0 3 2 0 0 0 0 1 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G2W853_CAPBA) Solyc01g099960.4 220 214 395 383 238 249 191 177 209 248 424 164 171 208 449 Pectinesterase (AHRD V3.3 *** A0A1U8E4I6_CAPAN) AT3G05620 Solyc01g099970.4 2548 919 508 1200 158 257 347 264 230 558 376 298 900 749 578 F-box family protein (AHRD V3.3 *** A0A2U1M1I9_ARTAN) AT5G27920 Solyc01g099980.4 731 340 333 338 118 147 102 92 257 343 335 363 346 612 2243 Enolase (DUF1399) (AHRD V3.3 *-* F4I3L9_ARATH) AT1G56230 Solyc01g099990.3 12 52 746 205 19 25 29 7 15 21 2 6 42 21 40 F-box domain, Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1KKL5_ARTAN) AT1G09155 Solyc01g100000.3 151 49 352 183 26 9 8 8 238 81 715 134 142 153 185 F-box domain, Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1MNC1_ARTAN) AT1G09155 Solyc01g100010.3 359 102 588 147 4 14 15 16 179 169 1420 167 222 181 257 F-box domain, Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1MNC1_ARTAN) AT1G09155 Solyc01g100020.4 42 55 106 101 99 125 128 121 140 112 78 112 78 150 106 Phospholipase (AHRD V3.3 *** A0A2G2V7W7_CAPBA) Solyc01g100030.5.1 380 2248 3655 2507 3669 3474 3145 3577 2369 2049 2874 3886 2747 4360 798 deoxyuridine triphosphatase AT3G46940 Solyc01g100040.3 4503 2435 2631 2218 1920 1813 1630 1665 2807 4691 5623 2452 1993 1966 3717 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1N538_ARTAN) AT5G27930 Solyc01g100050.3 12263 6640 4369 4382 2888 2697 2565 3457 4076 5973 3363 3813 4718 4964 4966 TOPLESS 3 AT5G27030 Solyc01g100060.4 1645 1688 1640 1409 1655 1694 1453 1564 1774 1074 1419 1497 2206 1655 1896 Pre-mRNA-splicing factor 38A (AHRD V3.3 *-* A0A2G2V7Y2_CAPBA) AT2G40650 Solyc01g100070.3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 --* NP_175330.1) Solyc01g100080.3 335 494 404 343 323 342 331 264 317 230 264 392 600 507 435 Single-stranded DNA-binding protein, mitochondrial (AHRD V3.3 *** A0A2G2V7W4_CAPBA) AT4G11060 Solyc01g100090.1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 wall-associated receptor kinase-like 20 (AHRD V3.3 *** A0A2I4G6Z9_9ROSI) Solyc01g100100.4 12 13 8 37 17 23 13 15 12 10 7 6 12 26 14 RING/U-box superfamily protein (AHRD V3.3 *-* Q1G3M1_ARATH) Solyc01g100103.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *-* A0A0B4ULM0_ORYSJ) Solyc01g100107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *** A0A2U1LVQ4_ARTAN) Solyc01g100110.4 595 910 1196 994 1032 1142 1047 962 967 748 1043 870 924 785 789 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1PE44_ARTAN) AT1G09160 Solyc01g100120.4 2 4 27 8 11 11 13 6 11 8 2 9 5 0 31 Kinesin-like protein (AHRD V3.3 *** A0A2G2XY75_CAPAN) Solyc01g100130.3 759 786 995 1005 626 1016 1016 732 1047 678 1115 665 766 918 1095 Zinc finger protein (AHRD V3.3 *-* A0A200PWL1_9MAGN) AT3G05670 Solyc01g100140.4 791 354 440 471 348 372 452 342 389 463 505 391 485 430 670 Dehydration-induced 19-like protein (AHRD V3.3 *** E3T7S4_GOSHI) Solyc01g100160.3 844 393 251 574 408 281 264 383 329 606 303 475 259 325 325 Dehydration-induced 19-like protein (AHRD V3.3 *-* E3T7S4_GOSHI) Solyc01g100170.3 389 378 441 364 351 357 401 328 367 262 390 332 461 446 400 Syntaxin (AHRD V3.3 *** A0A2G3AXP6_CAPCH) AT3G05710 Solyc01g100180.4 265 463 505 651 650 655 654 644 534 560 578 632 463 661 457 DNA polymerase III subunit epsilon (AHRD V3.3 *** B6TZF8_MAIZE) AT5G26940 Solyc01g100190.4 447 394 371 458 425 477 509 490 444 367 429 458 466 514 484 Protein misato 1-like (AHRD V3.3 *** A0A2K3NYQ0_TRIPR) AT4G37190 Solyc01g100200.3 1701 790 959 559 234 261 188 262 599 1276 1880 549 945 633 1029 gras4 Solyc01g100210.3 21 22 95 58 43 71 40 47 39 64 123 16 26 26 110 Hexosyltransferase (AHRD V3.3 *** A0A2G2V7U8_CAPBA) Solyc01g100220.3 61 134 101 107 164 114 132 145 120 81 153 152 148 131 161 GATA transcription factor 23 (AHRD V3.3 *** A0A2G3AXR3_CAPCH) Solyc01g100230.3 532 285 818 540 89 84 155 67 513 383 760 649 650 881 606 DnaJ-like protein subfamily B member 6 (AHRD V3.3 *** A0A2G2V7W8_CAPBA) AT1G56300 Solyc01g100240.3 691 443 585 376 170 158 168 141 312 942 516 244 529 445 267 Calmodulin binding protein-like (AHRD V3.3 *** A0A200R2D8_9MAGN) Solyc01g100250.3 194 219 178 214 209 215 180 206 224 158 196 258 242 200 98 Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic (AHRD V3.3 *** A0A2G2ZTJ6_CAPAN) AT1G19800 Solyc01g100260.4 1383 1061 850 815 1232 1034 1094 1252 1211 1376 702 1244 870 996 832 Ppx/GppA phosphatase (AHRD V3.3 *** A0A200R285_9MAGN) AT1G09195 Solyc01g100270.4 727 381 331 313 413 444 371 418 458 448 339 566 287 331 391 exonuclease mut-7 homolog isoform X1 (AHRD V3.3 *** A0A2I4EA87_9ROSI) AT1G56310 Solyc01g100280.4 58 382 326 415 507 449 590 501 297 172 182 305 300 536 121 RNA helicase DEAH-box4 AT3G05740 Solyc01g100290.4 374 661 658 649 800 985 878 1004 843 533 652 699 509 689 602 GPI-anchored adhesin-like protein (AHRD V3.3 *** Q9M2F2_ARATH) AT5G26910 Solyc01g100300.3 0 0 0 3 0 1 0 1 1 0 0 4 1 0 1 Unknown protein Solyc01g100310.2 1672 2571 2688 2306 3976 4212 3925 4196 3286 1762 3209 3272 2149 2620 2322 DUF1645 family protein (AHRD V3.3 *-* G7I9G3_MEDTR) AT3G62630 Solyc01g100320.3 2905 6508 6140 6207 7945 7369 7241 6487 6900 4435 6108 5946 9088 8513 7217 Disulfide-isomerase-like protein (AHRD V3.3 *** B3TLY7_ELAGV) AT2G47470 Solyc01g100330.3 696 760 840 713 961 916 786 701 562 506 833 728 910 805 840 Zinc finger matrin-type protein 2 (AHRD V3.3 *** A0A1U8DUS0_CAPAN) AT3G05760 Solyc01g100340.4 68 90 60 42 39 60 42 55 32 52 35 27 94 86 67 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3AWS1_CAPCH) AT1G09190 Solyc01g100350.3 2960 2278 2827 2368 2580 2910 2488 2260 2116 2240 2597 2132 2612 2285 3495 GTP-binding protein (AHRD V3.3 *** Q9SDK4_ORYSJ) AT3G62560 Solyc01g100360.4 401 1571 1216 1477 1901 1669 1788 2068 1363 1113 1083 1469 1654 1508 1246 Dihydrolipoyl dehydrogenase (AHRD V3.3 *** A0A2U1LTA9_ARTAN) AT4G16155 Solyc01g100370.3 445 227 280 219 207 236 229 288 238 342 327 230 306 239 157 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A2U1PDN0_ARTAN) AT3G62550 Solyc01g100380.4 9329 27060 20136 17918 28196 27189 27723 26318 22742 16233 20231 23409 41243 33072 24673 Calreticulin (AHRD V3.3 *** A0A2G3AWT5_CAPCH) AT1G09210 Solyc01g100390.3 0 11 11 8 16 5 5 11 5 3 20 6 10 5 6 Pyrophosphate-energized vacuolar membrane proton pump (AHRD V3.3 *** A0A2G2V5M7_CAPBA) Solyc01g100400.3 330 250 280 315 316 368 383 305 233 191 292 301 360 391 301 Pseudouridine synthase (AHRD V3.3 *** A0A200PWH1_9MAGN) AT1G56345 Solyc01g100410.3 234 344 330 289 284 406 368 303 244 257 287 296 347 326 367 Iron-sulfur cluster insertion protein erpA (AHRD V3.3 *** G1XXB6_9PROT) AT5G03905 Solyc01g100420.3 245 260 299 283 194 246 240 190 217 170 321 275 371 385 390 Peptide chain release factor 2 (AHRD V3.3 *** B6SY98_MAIZE) AT1G56350 Solyc01g100430.3 445 812 493 373 521 597 572 510 523 353 442 465 957 818 432 rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** A0A2G3AWT6_CAPCH) AT2G47420 Solyc01g100440.3 0 34 4 4 0 0 3 1 27 306 9 3 41 5 10 ATP-dependent DNA helicase (AHRD V3.3 *-* Q9ZUI1_ARATH) Solyc01g100450.1 266 177 120 169 109 117 144 153 146 181 86 161 85 166 100 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2V5L4_CAPBA) AT1G09820 Solyc01g150151.1 96 80 73 101 61 86 84 51 72 54 123 70 42 66 85 Unknown protein Solyc01g100460.3 96 93 82 47 93 99 60 81 70 120 68 83 54 49 40 BZIP transcription factor (AHRD V3.3 *** C0LQL1_9CARY) Solyc01g100470.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g100480.3 207 245 274 198 203 197 193 243 249 247 224 225 260 214 222 hypothetical protein (AHRD V3.3 *** AT1G56423.1) AT1G56423 Solyc01g100490.4 181 366 817 903 6 15 4 6 57 62 58 10 147 102 234 chloronerva AT1G09240 Solyc01g100500.3 1566 1403 1341 1018 1116 1133 977 1205 1552 904 1199 1227 1562 1539 1664 microfibrillar-associated protein 1-like (AHRD V3.3 *** A0A2I4G8F8_9ROSI) AT4G08580 Solyc01g100510.4 789 817 697 513 949 714 653 766 703 840 846 661 633 508 551 knotted 4 AT1G70510 Solyc01g100520.3 1621 2674 2506 2389 3037 2703 2798 2938 2588 2297 2167 2579 2470 2558 2338 Clp protease 2 proteolytic subunit AT1G02560 Solyc01g100530.3 4137 5252 6234 6886 9866 9456 9377 11859 6030 6666 5265 8664 4801 5268 3726 Arm repeat superfamily protein (AHRD V3.3 *** A0A2K3NTC9_TRIPR) AT5G26850 Solyc01g100540.4 748 388 424 416 369 410 449 440 406 499 335 411 247 372 529 HIT zinc finger and PAPA-1-like domain-containing protein (AHRD V3.3 *-* Q8GYE3_ARATH) AT2G47350 Solyc01g113620.3 131 81 198 158 103 165 169 79 130 146 244 95 118 94 162 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3P6K1_TRIPR) Solyc01g100570.4 7697 9086 7757 5159 6190 5567 5164 6045 6143 4660 6402 6080 12324 9969 9764 Nucleolar protein 56 (AHRD V3.3 *** A0A1U8DUW6_CAPAN) AT1G56110 Solyc01g100580.3 691 813 606 471 507 493 503 409 379 355 485 497 833 844 639 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R237_9MAGN) Solyc01g100590.3 623 641 828 607 676 704 674 632 657 764 750 558 1066 646 493 Heme binding protein (AHRD V3.3 *** Q9LZQ3_ARATH) AT3G62370 Solyc01g100600.4 747 1796 2019 1693 2831 2579 2634 2894 2113 1170 2258 2023 1314 1508 1779 LATE TERMINATION Solyc01g100610.3 1023 798 742 955 1303 1347 1325 1461 808 989 702 1008 763 799 715 Solute carrier family 40 protein (AHRD V3.3 *** A0A1U8E683_CAPAN) AT5G26820 Solyc01g100620.3 2 12 7 10 63 85 97 68 13 9 12 16 0 5 0 High mobility group B protein 10-like (AHRD V3.3 *-* A0A2K3M492_TRIPR) Solyc01g100630.3 32 23 7 40 12 10 12 5 9 11 13 15 16 14 47 Catalase (AHRD V3.3 *-* S8E1K9_9LAMI) Solyc01g100640.4 173 120 128 213 38 54 47 47 46 67 88 37 57 69 206 Catalase (AHRD V3.3 *-* K0IBB4_NICBE) Solyc01g100650.3 1089 982 1065 1098 925 1019 1207 964 942 776 949 857 703 1049 1445 NHL repeat-containing protein 2-like (AHRD V3.3 *** A0A2K3NND0_TRIPR) AT1G56500 Solyc01g100660.4 3928 1996 1162 1720 1060 1142 1158 1137 1906 2710 2083 1749 1450 1407 1615 Transcription factor (AHRD V3.3 *** A0A2G3AWX7_CAPCH) Solyc01g100670.1 3 0 0 0 4 1 0 0 0 3 0 0 0 0 0 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I4ETQ4_9ROSI) AT3G12460 Solyc01g100680.1 0 0 7 0 0 0 0 0 1 3 1 5 0 0 0 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I4ETQ4_9ROSI) AT3G12460 Solyc01g100690.3 2054 743 874 667 445 496 430 390 506 755 914 599 455 550 634 transmembrane protein (AHRD V3.3 --* AT4G01960.2) Solyc01g100720.3 3052 2385 1833 1731 1965 1600 1566 2081 2163 2475 1418 1931 2341 2259 1661 Importin subunit alpha (AHRD V3.3 *** A0A2G3AWX1_CAPCH) AT1G09270 Solyc01g100730.3 638 562 549 508 448 450 433 431 425 452 445 510 503 495 547 Rhodanese-like domain-containing protein 6 (AHRD V3.3 *** A0A1U8DXD0_CAPAN) AT1G09280 Solyc01g100740.4 308 312 248 181 146 131 149 101 143 138 98 151 353 334 274 Xaa-pro aminopeptidase (AHRD V3.3 *** A0A1J9S034_9PEZI) AT1G09300 Solyc01g100750.2 147 962 1271 1414 1880 1961 1430 1694 973 645 731 1127 463 1027 358 DUF538 domain-containing protein (AHRD V3.3 *** A0A1Q3CLQ5_CEPFO) AT1G56580 Solyc01g100760.2 287 1032 654 817 919 797 671 836 875 489 433 591 1167 1003 607 DUF538 domain-containing protein (AHRD V3.3 *** A0A1Q3CLQ5_CEPFO) AT1G56580 Solyc01g100770.2 412 676 612 823 454 394 346 385 728 505 541 598 1029 749 1207 DUF538 domain-containing protein (AHRD V3.3 *** A0A1Q3CLQ5_CEPFO) AT1G56580 Solyc01g100780.3 173 264 287 222 389 361 340 363 232 143 263 298 286 278 225 Agenet-like domain-containing protein (AHRD V3.3 *** A0A2U1NB46_ARTAN) AT1G09320 Solyc01g100790.1 8 47 28 35 17 20 23 24 32 15 7 11 42 35 35 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R1X9_9MAGN) Solyc01g100800.2 83 100 161 151 116 137 140 143 117 82 87 128 162 154 156 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R1X0_9MAGN) AT1G56570 Solyc01g100810.3 275 270 253 268 353 334 430 325 291 374 280 204 295 276 214 Neutral/alkaline invertase (AHRD V3.3 *** V5N4X0_MANES) AT1G56560 Solyc01g100820.3 528 753 743 748 834 817 879 777 717 647 662 630 654 658 743 AP-3 complex subunit mu (AHRD V3.3 *** A0A2G2V6N1_CAPBA) AT1G56590 Solyc01g100830.2 0 0 1 0 0 0 0 0 0 0 0 0 0 5 0 galactinol synthase 1 Solyc01g100840.3 220 222 229 201 305 282 248 245 175 160 225 204 256 237 286 Trafficking protein particle complex subunit 4 (AHRD V3.3 *** A0A1U8GQD3_CAPAN) AT5G02280 Solyc01g100850.3 244 495 324 411 496 519 468 486 585 281 283 353 373 378 389 ABC transporter-like (AHRD V3.3 *** A0A200QSY4_9MAGN) AT5G02270 Solyc01g100860.3 2488 3411 3155 3483 3583 3246 3458 3025 2861 2677 3035 2426 3333 3086 3597 ADP-ribosylation factor (AHRD V3.3 *** B4FP40_MAIZE) AT2G47170 Solyc01g100870.3 2386 3356 3910 4350 4213 4027 4051 3857 3210 3379 3892 3282 3315 3178 4123 ADP-ribosylation factor (AHRD V3.3 *** B4FP40_MAIZE) Solyc01g100880.4 0 0 0 0 0 0 0 2 1 0 0 0 0 0 3 WAT1-related protein (AHRD V3.3 *** K4B1B9_SOLLC) AT1G09380 Solyc01g100890.4 16 158 131 139 271 185 234 186 52 43 35 58 65 102 15 WAT1-related protein (AHRD V3.3 *** K4B1C0_SOLLC) Solyc01g100900.4 189 210 147 297 210 148 188 155 121 103 107 76 142 116 278 WAT1-related protein (AHRD V3.3 *** K4B1C1_SOLLC) Solyc01g100910.3 51 31 21 112 33 26 11 19 8 1 0 0 32 23 46 WAT1-related protein (AHRD V3.3 *** K4B1C2_SOLLC) Solyc01g100915.1 6 4 0 1 0 0 1 0 0 2 2 0 8 0 8 Unknown protein Solyc01g100920.3 513 986 1195 1467 506 304 352 184 955 685 913 276 875 821 1299 WAT1-related protein (AHRD V3.3 *** K4B1C3_SOLLC) Solyc01g100930.3 497 2132 1500 1957 3370 3606 3418 3339 2563 1718 1688 2324 1867 1732 1450 GDSL esterase/lipase (AHRD V3.3 *** A0A1U8GQF3_CAPAN) AT1G09390 Solyc01g100940.2 99 171 212 251 148 213 156 107 131 124 221 110 179 307 724 protein NIM1-INTERACTING 1-like isoform X2 (AHRD V3.3 -** XP_020213781.1) Solyc01g100960.3 619 393 606 649 269 294 349 254 493 344 508 303 596 582 851 Glucose-6-phosphate 1-dehydrogenase (AHRD V3.3 *** A0A1U8GXG1_CAPAN) AT1G09420 Solyc01g100970.3 2923 1281 1408 1632 1308 1065 1125 1008 1471 1465 1453 1149 1212 1351 2178 Peptidase C15 (AHRD V3.3 *** A0A200R1U9_9MAGN) AT1G56700 Solyc01g100980.4 1 7 4 0 7 10 4 10 45 6 0 9 5 4 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LK87_ARTAN) Solyc01g100990.3 222 285 235 254 235 303 247 308 296 283 292 207 292 305 320 Zinc finger transcription factor 13 AT5G26749 Solyc01g101000.3 12702 10777 9083 10875 11794 11350 12011 11658 9395 11280 8656 9522 9624 8836 8930 Protein kinase domain (AHRD V3.3 *** A0A200QSW1_9MAGN) AT5G26751 Solyc01g101010.4 807 575 458 499 374 433 397 510 564 546 250 493 567 544 559 RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein (AHRD V3.3 *-* AT5G26760.2) Solyc01g101015.1 14 8 11 4 6 0 1 4 7 1 1 1 16 6 1 Unknown protein Solyc01g101020.4 2007 1667 1418 1259 1140 1204 1136 1199 1917 1462 1381 1283 1869 1923 1770 FACT complex subunit SPT16 (AHRD V3.3 *** A0A2G3AVF8_CAPCH) AT4G10710 Solyc01g101030.4 120 1013 1080 683 1344 1313 1345 1412 1223 528 553 1249 670 1256 338 FACT complex subunit SPT16 (AHRD V3.3 *** A0A2G3AVE2_CAPCH) Solyc01g101040.3 1041 2521 2092 2133 3646 3233 3515 3373 3677 2357 2469 2745 2629 2744 1938 ATP-citrate synthase (AHRD V3.3 *** B6TD54_MAIZE) AT1G09430 Solyc01g101050.3 2 11 16 5 2 9 4 14 8 6 10 6 5 0 1 Peroxidase (AHRD V3.3 *** K4B1D5_SOLLC) Solyc01g101060.4 35739 23676 19338 24042 16837 15389 16417 17530 27387 24495 23814 25541 15124 19359 32308 S-adenosyl-L-methionine synthetase AT4G01850 Solyc01g101070.3 2152 1032 1420 1129 603 771 923 588 693 766 964 707 725 1075 1175 ABC transporter-like (AHRD V3.3 *** A0A200R1R9_9MAGN) AT3G53480 Solyc01g101090.3 309 287 570 416 523 513 498 399 354 466 458 355 286 402 331 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A1I9LLP9_ARATH) AT5G15930 Solyc01g101100.4 1357 1930 1894 1823 2757 3111 2551 2950 2751 1907 2453 2367 1183 1347 1355 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1K9U7_ARTAN) Solyc01g101110.3 178 297 271 286 436 408 336 586 312 241 199 396 152 253 106 Serine/threonine-protein kinase haspin (AHRD V3.3 *** A0A146F677_TOBAC) AT1G09450 Solyc01g101120.4 2478 4214 4565 5214 3999 3591 3192 4731 4029 4671 3949 4316 5420 4285 4258 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* F4I0Z2_ARATH) AT1G09460 Solyc01g101130.3 899 500 707 535 500 544 427 526 492 647 589 648 392 521 563 Myosin heavy chain, cardiac protein (AHRD V3.3 *** A0A2P5D8H8_PARAD) AT5G26770 Solyc01g101140.4 3513 1742 1947 1603 1715 1661 1563 1896 1988 2432 1924 1693 1628 1741 1874 Endonuclease or glycosyl hydrolase (AHRD V3.3 *-* A0A2U1M909_ARTAN) AT3G62200 Solyc01g101150.3 60 43 28 37 29 34 42 78 60 46 23 42 30 47 38 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R1Q1_9MAGN) Solyc01g101160.2 3079 3086 2624 3503 3505 3375 3011 3668 2364 3813 2269 4191 2895 3465 1644 hypothetical protein (AHRD V3.3 *-* AT1G09520.1) AT1G09520 Solyc01g101170.4 0 0 4 0 0 0 0 1 4 1 7 0 0 6 0 Viridiflorene synthase (AHRD V3.3 *** TPS31_SOLLC) AT5G23960 Solyc01g101180.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *** G5CV44_SOLLC) AT5G23960 Solyc01g101190.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *** G5CV44_SOLLC) AT5G23960 Solyc01g101195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *-* G5CV43_SOLLC) Solyc01g101210.4 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 Terpene synthase (AHRD V3.3 *** G5CV43_SOLLC) AT5G23960 Solyc01g101220.3 0 0 2 9 1 4 0 2 1 0 0 3 3 0 7 Vetispiradiene synthase (AHRD V3.3 *-* Q9XJ25_SOLTU) Solyc01g101225.1 1394 1223 1313 1154 1121 1161 1300 1163 1300 1405 1353 1356 1262 1336 1305 Transposase, MuDR, Zinc finger, SWIM-type, MULE transposase domain protein (AHRD V3.3 *** A0A2U1MQR5_ARTAN) AT1G49920 Solyc01g101240.4 11680 5159 4547 4196 3341 3531 2963 3372 7705 9126 7479 8077 4736 5170 6735 aspartic protease precursor Solyc01g101250.3 1090 1010 1476 1279 1382 1445 1535 1107 1087 766 1283 978 1181 1061 1558 G-patch domain-containing protein (AHRD V3.3 *** A0A1Q3DGV7_CEPFO) AT5G26610 Solyc01g101260.2 31 70 228 174 131 62 94 51 60 25 61 74 216 68 155 hypothetical protein (AHRD V3.3 --* AT5G26620.1) AT3G05858 Solyc01g102260.3 3 2 11 5 1 1 2 3 2 2 2 1 1 10 0 Agamous-like MADS-box protein AGL80 (AHRD V3.3 *** A0A2G2UYN0_CAPBA) AT5G48670 Solyc01g102270.2 216 460 788 612 739 836 877 535 331 275 540 413 561 553 548 Unknown protein Solyc01g102280.3 29 24 4 13 28 19 22 19 19 23 60 11 18 4 5 Unknown protein Solyc01g150152.1 231 83 214 161 43 40 46 27 51 149 99 88 66 102 289 Unknown protein Solyc01g102290.3 472 131 214 168 14 23 16 12 63 266 381 92 91 129 389 Low temperature and salt responsive protein (AHRD V3.3 *** Q8H9B8_SOLTU) AT3G05890 Solyc01g102300.3 3503 1619 1202 1670 968 933 876 830 1122 1290 973 1008 1344 1441 2009 bHLH transcription factor 006 AT1G09530 Solyc01g102310.3 768 1176 938 492 430 447 417 566 1517 484 895 575 774 619 507 60S ribosomal protein L34 (AHRD V3.3 *-* A0A2G2VNY7_CAPBA) AT3G05900 Solyc01g102320.2 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200Q5Q6_9MAGN) Solyc01g102330.3 393 1397 1748 1732 2903 3089 2857 2808 1953 1310 1915 1930 1759 1680 1324 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) AT3G53010 Solyc01g102340.3 486 727 816 881 1839 1541 1918 1320 1144 1636 1901 999 1007 435 1325 R2R3MYB transcription factor 61 AT1G09540 Solyc01g102350.3 472 894 1579 1130 837 728 743 664 832 787 1811 801 741 677 992 Pectin acetylesterase (AHRD V3.3 *** K4B1G3_SOLLC) AT3G05910 Solyc01g102360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AT47_ARATH) Solyc01g102370.4 1005 1515 1686 1787 1888 2277 2338 1778 1146 1118 1286 1535 1583 1728 1329 Flap endonuclease 1 (AHRD V3.3 *** A0A2G2W895_CAPBA) AT5G26680 Solyc01g102380.5.1 2 0 0 8 0 2 0 0 0 1 2 0 1 0 1 germin AT1G09560 Solyc01g102390.4 218 400 600 336 282 413 333 290 379 300 660 341 505 359 523 Germin-like protein (AHRD V3.3 *** O65358_SOLTU) AT1G09560 Solyc01g102400.3 117 254 227 233 249 236 236 176 181 170 291 179 192 189 272 Germin-like protein (AHRD V3.3 *** O65358_SOLTU) AT1G09560 Solyc01g102410.3 870 1541 1155 897 1368 1185 1122 1541 1335 1083 1004 1130 1702 1401 941 Glutamine--tRNA ligase (AHRD V3.3 *** A0A2I0WQV3_9ASPA) AT5G26710 Solyc01g102420.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g102430.2 0 1 5 1 0 2 1 8 4 0 0 7 4 1 1 hypothetical protein (AHRD V3.3 -** AT3G05936.1) AT3G05936 Solyc01g102440.3 118 58 63 67 33 92 68 63 41 71 67 72 25 53 30 organic solute transporter ostalpha protein (DUF300) (AHRD V3.3 *-* AT5G26740.3) Solyc01g102450.3 64 37 13 56 28 49 53 32 18 33 11 31 12 34 5 organic solute transporter ostalpha protein (DUF300) (AHRD V3.3 *-* AT5G26740.3) Solyc01g102460.4 79 44 66 50 68 57 71 52 55 46 79 51 41 45 39 ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 --* AT5G26720.1) AT5G26720 Solyc01g102470.2 229 355 329 335 279 297 303 528 287 332 223 355 538 397 279 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200QSP1_9MAGN) AT5G03560 Solyc01g102480.3 1415 1347 1270 1435 1238 1226 1243 1336 1148 1579 1147 1480 1260 1113 1133 organic solute transporter ostalpha protein (DUF300) (AHRD V3.3 *** AT5G26740.3) AT3G05940 Solyc01g102490.3 560 401 707 398 377 424 479 379 421 413 475 328 384 509 604 NADPH:adrenodoxin oxidoreductase, mitochondrial (AHRD V3.3 *** A0A2G2XXN3_CAPAN) AT4G32360 Solyc01g102500.3 1179 959 653 843 557 648 597 534 757 734 744 698 1039 968 1083 netrin receptor DCC (AHRD V3.3 *-* AT3G50910.1) Solyc01g102510.4 2562 3049 2431 2480 2587 2567 2824 2853 2664 2306 2273 2322 2457 2604 2366 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** F4KIH8_ARATH) AT5G24710 Solyc01g102520.4 93 96 279 203 138 137 116 78 86 141 267 72 76 142 176 MLO-like protein (AHRD V3.3 *** K4B1I0_SOLLC) AT4G24250 Solyc01g102530.3 429 287 337 380 337 352 328 292 291 447 344 323 298 355 339 SNARE associated Golgi protein (AHRD V3.3 *** A0A200R1H8_9MAGN) AT2G02370 Solyc01g102540.3 1334 1273 1561 1268 1252 1630 1510 1373 1118 975 1098 1362 1379 1404 1255 hpoxia-induced protein 242 AT1G33410 Solyc01g102550.4 155 228 124 123 238 143 168 307 183 177 112 234 124 138 152 nuclear pore complex protein NUP160 isoform X4 (AHRD V3.3 *-* A0A2I4G5Z6_9ROSI),Pfam:PF11715 Solyc01g102560.2 1518 1800 1556 1345 1430 1743 1658 1400 1297 1018 1326 1231 1967 1820 1938 Eukaryotic translation initiation factor 3 subunit C (AHRD V3.3 *-* A0A2G2W8F5_CAPBA) Solyc01g102570.4 402 553 194 251 396 382 331 522 562 343 258 438 416 459 335 Eukaryotic translation initiation factor 3 subunit C (AHRD V3.3 *-* A0A2G3BUN7_CAPCH) Solyc01g102580.3 1947 2727 3414 2473 3132 2861 2966 3117 3750 3046 3738 2951 2603 2137 1905 endo-1,4-beta-glucanase (Cel3) AT5G49720 Solyc01g102590.3 1315 2396 1585 1478 1902 2179 2037 1883 1707 946 1433 1516 2163 2124 1400 Eukaryotic translation initiation factor 3 subunit C (AHRD V3.3 *-* A0A2G2W8F5_CAPBA) Solyc01g102610.3 1089 764 159 895 547 488 483 550 724 709 317 490 705 231 372 Ferric reduction oxidase 6 (AHRD V3.3 *** A0A2G3BUN6_CAPCH) AT5G49730 Solyc01g102620.3 0 0 0 0 1 0 0 0 4 0 0 0 1 0 0 Unknown protein Solyc01g102630.4 2 1 4 0 1 0 2 0 1 1 0 3 0 0 0 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc01g102640.2 182 73 157 121 55 113 108 79 49 78 101 44 46 76 121 Nuclear pore complex protein NUP98A (AHRD V3.3 *-* A0A2G3DE78_CAPCH) Solyc01g102650.2 292 88 240 217 81 113 83 66 53 84 93 80 96 125 108 Unknown protein Solyc01g102660.4 1943 1213 1637 1565 799 855 847 712 1621 1913 1886 1142 2205 1707 2981 Glutathione S-transferase (AHRD V3.3 *** A0A2U1NYU9_ARTAN) AT2G02390 Solyc01g102670.3 1809 858 607 572 550 574 569 539 714 716 646 722 407 664 582 DNA glycosylase (AHRD V3.3 *** A0A2U1MY08_ARTAN) Solyc01g102680.4 4 19 22 27 21 31 25 31 21 7 12 24 9 23 8 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1P0D3_ARTAN) Solyc01g102690.4 70 88 121 60 55 82 99 64 89 55 43 54 94 79 77 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2V0P1_CAPBA) AT3G49710 Solyc01g102700.4 750 837 1116 935 597 630 483 620 1060 856 768 887 539 870 606 Leucine-rich repeat receptor-like protein kinase 1 (AHRD V3.3 *** A0A1P8SF01_NICBE) AT5G49760 Solyc01g102710.2 2477 1345 1273 1052 330 357 350 330 1465 1610 1304 1159 1369 1445 1637 Leucine-rich repeat receptor-like protein kinase 1 (AHRD V3.3 *** A0A1P8SF01_NICBE) AT5G49760 Solyc01g102720.3 109 203 219 188 276 280 309 204 185 148 242 152 96 88 153 Polyketide cyclase/dehydrase and lipid transport superfamily protein (AHRD V3.3 *** A0A2U1QGT1_ARTAN) AT5G49800 Solyc01g102730.3 173 289 308 297 462 449 390 491 347 318 275 372 432 334 220 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q9ZVQ2_ARATH) AT2G02400 Solyc01g102740.3 182 233 109 297 150 106 182 155 284 176 316 175 120 100 158 NAC domain (AHRD V3.3 *-* A0A200PZR6_9MAGN) AT2G02450 Solyc01g102750.3 827 711 734 569 775 806 690 762 725 674 484 705 649 696 599 PHD finger protein ALFIN-LIKE 6 (AHRD V3.3 *** A0A2G2XXF4_CAPAN) AT1G14510 Solyc01g102760.3 1529 1701 1677 1524 2133 2327 2049 2178 1543 1326 1702 1701 1704 1632 1415 PHD finger protein ALFIN-LIKE 8 (AHRD V3.3 *** A0A1U8DXM3_CAPAN) AT1G14510 Solyc01g102770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein Z (AHRD V3.3 *** A0A1U8QD60_CAPAN) ATCG00300 Solyc01g102790.3 70 100 102 109 74 94 91 85 106 58 106 95 168 121 142 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8E6I7_CAPAN) AT1G14470 Solyc01g102800.3 852 1523 938 951 1147 1044 1061 1374 1265 980 788 1196 1517 1361 814 Histidine--tRNA ligase, cytoplasmic (AHRD V3.3 *** A0A2G3BUL7_CAPCH) AT3G02760 Solyc01g102810.3 498 785 892 753 1263 1316 1406 1621 1382 644 862 970 737 795 657 DNA polymerase III subunit gamma/tau (AHRD V3.3 *** A0A2K3P8Q5_TRIPR) AT2G02480 Solyc01g102820.4 786 869 957 934 1346 1137 1237 1323 933 992 771 1130 894 894 610 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (AHRD V3.3 *** A9ZN09_HEVBR) AT2G02500 Solyc01g102830.3 776 1196 1700 1700 1711 1897 2027 1564 1083 1251 1499 1352 1361 1303 1432 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A (AHRD V3.3 *** A0A1U8E6J2_CAPAN) AT1G14450 Solyc01g102840.3 329 169 585 182 77 73 75 105 153 331 465 93 230 195 158 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2U1NT16_ARTAN) Solyc01g102850.3 32 19 64 119 5 14 8 4 17 36 47 8 15 26 61 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *** F4K5U7_ARATH) Solyc01g102860.2 133 142 159 196 222 204 237 227 188 131 249 141 100 149 268 golgin family A protein (AHRD V3.3 *-* AT1G51080.1) AT1G51080 Solyc01g102870.3 72 54 73 79 116 54 74 74 34 79 62 57 74 121 67 receptor-like protein kinase BRI1-like 3 (AHRD V3.3 *** A0A1U8HLY5_CAPAN) Solyc01g102880.3 311 287 347 320 175 188 186 212 249 289 319 210 380 267 271 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3P9V5_TRIPR) Solyc01g102890.4 7 1 2 5 0 0 1 0 8 0 0 4 2 2 1 Germin-like protein subfamily 1 member (AHRD V3.3 *** A0A2K3JPE5_TRIPR) AT5G39190 Solyc01g102895.1 0 0 0 0 0 1 0 0 0 1 0 0 0 3 0 Germin-like protein subfamily 1 member 20 (AHRD V3.3 *** A0A2G2XXE7_CAPAN) AT5G39190 Solyc01g102910.4 25 3 7 46 0 3 0 0 22 13 7 5 2 2 5 Germin-like protein subfamily 1 member (AHRD V3.3 *** A0A2K3JPE5_TRIPR) AT5G39190 Solyc01g102920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3MNP1_TRIPR) Solyc01g102930.1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3PR54_TRIPR) Solyc01g102940.3 1304 2068 2465 2320 2665 3018 3110 2656 2631 2254 2468 2337 2220 2121 2075 Methionine S-methyltransferase (AHRD V3.3 *** A0A2G2W8J7_CAPBA) AT5G49810 Solyc01g102950.3 401 698 561 772 698 776 908 661 857 588 391 520 549 521 625 Lycopene beta/epsilon cyclase protein (AHRD V3.3 *** A0A2U1QDC2_ARTAN) AT2G32640 Solyc01g102960.3 47 24 22 46 21 27 26 26 75 6 40 46 56 20 1 22.0 kDa class IV heat shock protein (AHRD V3.3 *** A0A2G3ATG3_CAPCH) Solyc01g102970.3 1747 1507 1214 1120 1306 1226 1260 1485 1681 1317 946 1467 1400 1458 1209 squamous cell carcinoma antigen recognized by T-cells 3-like (AHRD V3.3 *** A0A2I4EEH0_9ROSI) AT4G24270 Solyc01g102980.3 545 690 871 822 1097 1065 820 948 495 558 571 873 435 443 353 zinc-finger homeodomain protein 4 (AHRD V3.3 *** A0A2I4EEG0_9ROSI) AT1G14440 Solyc01g102990.3 583 353 405 372 389 430 438 417 414 349 377 358 351 424 447 ATP-dependent Clp protease ATP-binding subunit ClpX (AHRD V3.3 *** A0A2G2Y1Q3_CAPAN) AT5G49840 Solyc01g103000.3 35 55 21 48 22 39 21 26 34 18 11 18 34 25 23 Unknown protein Solyc01g103010.4 2284 3781 2880 3337 3265 3343 3672 3998 3412 2603 2273 3223 3766 3925 3072 Cullin-associated NEDD8-dissociated protein 1 (AHRD V3.3 *** A0A2G2W8I3_CAPBA) AT2G02560 Solyc01g103020.4 1688 1132 1071 1037 967 1072 1061 852 1024 931 1185 959 1048 1073 1182 nucleic acid binding/RNA binding protein (AHRD V3.3 *** AT2G02570.4) AT2G02570 Solyc01g103030.3 1166 744 1418 1140 1757 1473 1352 1386 1738 1440 2093 1445 290 535 625 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1PWN6_ARTAN) AT1G59740 Solyc01g103040.4 311 450 317 353 471 562 593 574 602 277 376 435 352 412 284 mitotic spindle checkpoint protein MAD1 (AHRD V3.3 *** A0A2I4EES6_9ROSI) AT5G49880 Solyc01g103045.1 16 0 0 8 0 0 0 0 5 5 0 0 5 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc01g103050.3 6929 6669 4521 5312 5124 4930 5229 5509 5871 6267 4480 5204 5711 5731 4849 Auxin Response Factor 1 AT1G59750 Solyc01g103060.4 0 1 0 2 0 0 0 0 1 0 3 0 2 0 3 lipid transfer-like protein VAS (AHRD V3.3 *** A0A1U8HFX3_CAPAN) AT5G13900 Solyc01g103070.2 54 500 379 944 1288 1191 1324 1377 578 351 482 797 65 279 383 homeobox protein (AHRD V3.3 -** AT4G24265.3) AT4G24265 Solyc01g103080.3 1899 1377 1274 976 1044 1048 1014 1025 1164 1099 872 1113 1381 1425 1203 ATP-dependent RNA helicase (AHRD V3.3 *** A0A0U9HKI9_KLENI) AT1G59760 Solyc01g103090.4 1545 963 1137 846 851 941 1010 697 834 623 1135 687 875 1149 1480 Zinc finger transcription factor 14 Solyc01g103100.3 464 1090 883 909 1536 1475 1576 1489 868 678 773 871 875 733 790 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1N9F9_ARTAN) AT1G10310 Solyc01g103110.3 704 553 572 602 528 570 659 522 433 468 490 360 348 436 466 GNAT family N-acetyltransferase (AHRD V3.3 *** A0A248JVD2_9PROT) AT2G23390 Solyc01g103120.3 8 9 32 34 19 15 27 14 18 15 18 17 26 13 44 Dynamin-2B (AHRD V3.3 *** A0A2G2W8L1_CAPBA) Solyc01g103130.2 3 10 4 11 11 7 9 4 17 14 3 5 9 1 12 Dynamin (AHRD V3.3 *** A0A2U1N3P9_ARTAN) Solyc01g103140.3 119 283 234 291 267 342 308 252 264 249 361 287 238 268 335 Chloride channel protein (AHRD V3.3 *** K4B1P0_SOLLC) AT5G49890 Solyc01g103150.3 173 161 184 204 178 244 204 172 225 134 199 167 232 287 215 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MN76_TRIPR) AT1G10280 Solyc01g103160.3 3516 3432 2511 2533 2138 2264 2358 2264 2128 2199 2130 2371 3237 3397 2460 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2Y1S8_CAPAN) AT3G49240 Solyc01g103170.4 223 123 161 182 116 119 123 92 153 171 195 124 100 119 151 Lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707) (AHRD V3.3 *** F4JRK4_ARATH) AT4G18530 Solyc01g103180.4 800 625 595 719 678 851 720 537 567 576 612 570 524 580 641 Protein FAR1-RELATED SEQUENCE 11 (AHRD V3.3 *** A0A2G2Y1N4_CAPAN) AT1G10240 Solyc01g103190.3 621 345 321 275 217 299 292 219 330 285 416 243 392 356 391 COX assembly mitochondrial protein (AHRD V3.3 *** A0A2G3BUT7_CAPCH) AT4G21192 Solyc01g103200.4 274 284 383 349 349 418 463 233 331 316 422 298 209 212 244 plasminogen activator inhibitor (AHRD V3.3 *** AT1G57680.3) AT1G57680 Solyc01g103220.3 827 2871 3103 2177 2562 2555 2404 2246 1763 1350 2588 1598 3140 2563 2107 Cytochrome c (AHRD V3.3 *** A0A2G3BUT2_CAPCH) AT4G10040 Solyc01g103230.3 499 780 786 825 1108 967 1028 1089 1223 954 863 1024 735 884 996 Non-lysosomal glucosylceramidase (AHRD V3.3 *** A0A2G3BUU5_CAPCH) AT5G49900 Solyc01g103240.4 0 0 11 3 5 3 3 2 5 0 0 2 2 5 14 MAP kinase kinase kinase 9 Solyc01g103250.4 939 1179 2014 1565 2363 2623 2483 2237 1865 1039 1761 1771 1276 1748 1542 Zinc finger CCCH domain-containing protein (AHRD V3.3 *-* A0A2K3NPU7_TRIPR) Solyc01g103260.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g103270.4 5 9 9 18 28 22 30 31 22 11 14 24 7 16 12 Unknown protein Solyc01g150153.1 5 10 13 9 19 12 19 19 6 13 6 11 3 15 22 Plus-3 domain-containing protein (AHRD V3.3 *** A0A1Q3CWN4_CEPFO) Solyc01g103310.4 41 64 126 158 197 185 247 105 98 51 126 92 84 112 146 Zinc finger CCCH domain-containing protein (AHRD V3.3 *-* A0A2K3NPU7_TRIPR) Solyc01g103340.4 509 321 308 429 246 349 422 233 376 253 293 222 273 427 566 Zinc finger CCCH domain-containing protein (AHRD V3.3 *-* A0A2K3NPU7_TRIPR) AT5G23480 Solyc01g103330.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc01g103350.3 570 847 972 1236 985 1119 1297 1095 1018 1042 1039 1061 870 844 946 Cyclin-dependent kinase C-2 (AHRD V3.3 *** A0A2G2Y1M4_CAPAN) AT1G09600 Solyc01g103360.4 2 50 32 28 33 21 15 20 31 63 50 30 10 25 50 Glucuronoxylan 4-O-methyltransferase 3 (AHRD V3.3 *** A0A1U8DVE2_CAPAN) AT1G09610 Solyc01g103370.3 1424 1360 1512 1168 1747 1471 1335 1659 1851 1573 1354 1551 1849 1494 1374 small GTP-binding protein B AT3G11730 Solyc01g103380.4 363 626 482 422 608 459 444 604 574 423 394 447 566 645 482 Ras GTPase (AHRD V3.3 *** K2QMU3_MACPH) AT1G09630 Solyc01g103390.3 39 78 158 153 218 235 243 161 187 101 181 157 95 84 97 12-oxophytodienoate reductase 2 Solyc01g103400.4 508 441 678 643 527 632 592 414 440 424 939 484 474 426 697 transmembrane protein (AHRD V3.3 --* AT1G09645.1) AT1G09645 Solyc01g103410.3 3553 2857 3422 3132 3849 4516 3993 3114 3617 3056 4379 3099 3019 2850 4027 KH domain-containing protein (AHRD V3.3 *** A0A2G2W8I6_CAPBA) AT1G09660 Solyc01g103420.4 1439 976 947 1090 1058 1091 1155 1106 1101 994 972 995 1015 1152 1063 Regulator of nonsense transcripts UPF3 (AHRD V3.3 *** A0A2I0X275_9ASPA) AT1G33980 Solyc01g103430.4 3788 2566 3012 3397 2140 2338 2578 2208 2456 2738 2987 2407 1969 2581 3262 Shaggy-related protein kinase kappa (AHRD V3.3 *** A0A2G3BUT0_CAPCH) AT1G09840 Solyc01g103440.3 468 592 491 471 389 458 451 522 599 427 280 483 624 689 471 Phosphoribosylamine--glycine ligase (AHRD V3.3 *** A0A2G2Y1L3_CAPAN) AT1G09830 Solyc01g103450.3 6963 8208 6551 5093 6905 6988 6487 6123 6573 5444 5299 6309 7795 8396 7510 70 kDa heat shock protein (AHRD V3.3 *** Q2QV45_ORYSJ) AT4G24280 Solyc01g103460.2 2810 1279 919 1124 900 809 640 1016 1004 1506 1287 952 1130 962 1233 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I4H4A1_9ROSI) AT3G12460 Solyc01g103470.2 95 87 225 109 134 117 123 118 139 177 618 158 23 92 128 proline-rich receptor-like protein kinase PERK4 (AHRD V3.3 --* XP_026410247.1) Solyc01g103480.3 2375 4380 3741 3924 4475 4491 4747 4511 3977 3504 3533 3520 4144 3803 3609 Coatomer subunit delta (AHRD V3.3 *** A0A2G2W8M4_CAPBA) AT5G05010 Solyc01g103490.3 1458 1420 1642 1650 1449 1530 1705 1435 1441 1705 1464 1270 1723 1468 1203 MACPF domain-containing protein (AHRD V3.3 *** A0A1Q3B5D7_CEPFO) AT4G24290 Solyc01g103500.4 55 104 266 171 481 390 387 363 189 84 235 244 130 118 100 multidrug resistance protein (AHRD V3.3 *** AT1G58007.4) AT1G09812 Solyc01g103510.4 912 2897 1696 1872 1573 1978 1933 1798 1935 1095 1217 1373 2108 1974 1492 60S ribosomal protein L3 (AHRD V3.3 *** A0A2G3AWH4_CAPCH) AT1G61580 Solyc01g103530.3 1424 2746 2297 2115 3110 2944 3045 2996 2740 1984 1757 1893 3306 3284 2387 Leucine-rich receptor-like protein kinase family protein, putative (AHRD V3.3 *** A0A061DXB1_THECC) Solyc01g103540.3 63255 35401 21643 23351 18922 20400 17997 17423 21271 25960 19712 22528 26467 27568 26635 Evolutionarily conserved C-terminal region 2 (AHRD V3.3 *-* F4JDC2_ARATH) AT1G09810 Solyc01g103550.1 0 2 14 4 11 17 9 20 11 1 8 5 3 3 12 Transcription factor, MADS-box (AHRD V3.3 *-* A0A2U1PJL7_ARTAN) AT5G55690 Solyc01g103560.3 272 402 388 310 358 369 355 344 286 308 345 312 370 347 269 tRNA pseudouridine synthase (AHRD V3.3 *** A0A2G3BUS0_CAPCH) AT1G09800 Solyc01g103570.3 904 931 691 838 778 731 802 847 943 628 759 942 953 1051 681 DNA-binding bromodomain-containing protein (AHRD V3.3 *** F4I9P8_ARATH) AT1G58025 Solyc01g103580.3 162 143 226 240 181 174 180 129 145 172 335 172 110 125 176 DUF679 domain-containing protein (AHRD V3.3 *** A0A1Q3DCM8_CEPFO) AT4G24310 Solyc01g103590.4 1856 2718 5167 2950 4381 3554 5124 2862 5396 5757 7382 7386 3004 3161 2825 Lactoylglutathione lyase / glyoxalase (AHRD V3.3 *** A0A1Y1HY85_KLENI) Solyc01g103595.1 30 21 61 74 31 60 62 30 37 30 112 28 24 61 104 Jasmonate ZIM domain protein l (AHRD V3.3 *** I3WTB0_NICAT) Solyc01g103610.4 278 142 121 197 279 207 247 216 242 203 230 214 158 216 199 Disease resistance protein (AHRD V3.3 *** A0A2U1Q881_ARTAN) Solyc01g103620.4 168 165 253 274 292 273 268 354 241 332 148 299 160 208 123 Bile acid:sodium symporter (AHRD V3.3 *** A0A200PTK0_9MAGN) Solyc01g103630.4 0 25 69 25 10 7 19 8 49 31 83 32 0 10 2 Lactoylglutathione lyase / glyoxalase (AHRD V3.3 *** A0A1Y1HY85_KLENI) Solyc01g103640.4 49 112 92 87 44 89 72 97 92 111 150 92 94 90 68 Plant organelle RNA recognition domain (AHRD V3.3 *** A0A200QY68_9MAGN) AT4G24320 Solyc01g103650.3 198 161 100 119 88 76 110 87 213 235 192 86 235 211 116 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9XID7_ARATH) AT5G49950 Solyc01g103660.4 15 87 164 111 30 37 50 47 233 115 299 239 50 57 89 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9XID7_ARATH) AT5G49950 Solyc01g103670.4 374 373 352 410 436 417 528 522 496 387 435 406 400 446 405 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9XID7_ARATH) AT5G49950 Solyc01g103680.3 4374 5593 3048 3963 5031 4300 4136 5663 4012 5137 2917 4599 5154 4508 3436 DUF1682 domain-containing protein (AHRD V3.3 *** A0A1Q3D239_CEPFO) AT4G24330 Solyc01g103690.4 1997 1202 1034 1336 922 1171 1106 957 1101 1214 1370 1044 927 1306 1390 RNA helicase family protein (AHRD V3.3 *** A0A2U1QG01_ARTAN) AT1G58060 Solyc01g103700.3 1 38 21 4 21 11 16 9 19 12 16 11 1 21 29 WEB family protein (AHRD V3.3 *** A0A2G3AU55_CAPCH) AT1G58070 Solyc01g103710.4 1304 814 753 941 712 626 574 637 661 1116 739 730 792 829 854 NifU-like protein 2, chloroplastic (AHRD V3.3 *** A0A1U8DVJ9_CAPAN) AT5G49940 Solyc01g103720.4 4021 4341 3189 2835 2464 2657 2851 2583 2501 2387 2244 2596 4375 4069 3113 Ribosome biogenesis protein BOP1 homolog (AHRD V3.3 *** A0A2G2Y2H0_CAPAN) AT2G40360 Solyc01g103750.4 631 1312 1286 1254 1422 1419 1402 1472 1097 851 944 1112 1139 1100 1058 ATP phosphoribosyltransferase (AHRD V3.3 *** O46887_NOCGO) AT1G09795 Solyc01g103760.3 252 568 700 918 803 1166 1162 750 593 525 592 605 556 539 531 magnesium transporter NIPA (DUF803) (AHRD V3.3 *** AT4G13800.8) AT1G34470 Solyc01g103770.3 89 127 154 200 153 121 149 100 102 72 115 136 156 128 160 Unknown protein Solyc01g103780.4 4040 4957 3380 7104 5437 4834 5736 6712 4529 4752 3973 4431 4496 3358 4093 TCP transcription factor 11 Solyc01g103790.3 15 223 131 68 197 240 240 174 170 20 101 106 85 47 34 Protein kinase superfamily protein (AHRD V3.3 *-* A0A2U1PSD3_ARTAN) Solyc01g103800.3 2623 4719 5164 4144 5011 5268 5136 4063 2762 2627 4531 3656 5137 4741 4954 40S ribosomal protein S12 (AHRD V3.3 *** A0A1U8DVK6_CAPAN) AT2G32060 Solyc01g150154.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc-finger homeodomain protein 6 (AHRD V3.3 *** A0A2G3D7X0_CAPCH) Solyc01g150155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc-finger homeodomain protein 1-like (AHRD V3.3 *** A0A2I4FF48_9ROSI) Solyc01g103810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc-finger homeodomain protein 3 (AHRD V3.3 *** A0A2G3ASA5_CAPCH) Solyc01g103820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc-finger homeodomain protein 3 (AHRD V3.3 *** A0A2G3ATA7_CAPCH) Solyc01g103830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger-homeodomain protein 1 (AHRD V3.3 *** B0LK16_ACOAM) Solyc01g103840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 Zinc-finger homeodomain protein 6 (AHRD V3.3 *-* A0A1J3FEE5_NOCCA) Solyc01g103850.4 463 583 538 504 538 425 439 535 569 473 441 524 635 539 565 Ubiquitin-like domain-containing CTD phosphatase (AHRD V3.3 *** A0A1J3JLY9_NOCCA) AT4G06599 Solyc01g103860.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 COBRA-like protein (AHRD V3.3 *** K4B1W1_SOLLC) AT1G09790 Solyc01g103870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AGAMOUS-like 98 (AHRD V3.3 *-* Q9FIW6_ARATH) Solyc01g103873.1 369 386 459 320 266 255 222 342 398 451 274 361 413 363 253 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** F4I9R1_ARATH) AT1G58110 Solyc01g103875.1 240 282 143 211 398 314 245 395 323 308 193 355 246 299 125 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** F4I9R1_ARATH) AT1G58110 Solyc01g103877.1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 COBRA-like protein (AHRD V3.3 *** K4B1W1_SOLLC) AT1G09790 Solyc01g103890.3 892 751 844 827 725 847 739 778 953 855 798 799 830 782 794 magnesium transporter MRS2-4 (AHRD V3.3 *** A0A2I4FV61_9ROSI) AT3G58970 Solyc01g103900.2 0 3 3 0 0 0 1 0 0 1 0 0 0 0 0 Phospholipase D (AHRD V3.3 *-* M0ZZP4_SOLTU) Solyc01g103910.1 0 0 0 1 1 0 0 3 2 0 0 0 0 0 0 Phospholipase D (AHRD V3.3 *** K4B1W6_SOLLC) Solyc01g103920.3 21 16 52 70 8 8 11 10 24 15 84 23 39 23 197 Ferredoxin (AHRD V3.3 *** K4B1W7_SOLLC) AT1G60950 Solyc01g103930.3 1684 3177 2569 2755 3384 3157 3149 4277 3068 3246 2442 3542 3264 3018 2427 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G2Y1V0_CAPAN) AT1G10950 Solyc01g103940.3 2326 2908 2633 2457 2951 2596 2687 2738 2793 2916 2634 2550 3251 2973 3096 Protein kinase (AHRD V3.3 *** O65765_CRAPL) AT1G60940 Solyc01g103950.4 608 554 682 695 479 578 681 552 534 504 584 469 422 631 970 Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase (AHRD V3.3 *** A0A2Z4MGS9_BREBE) AT1G22940 Solyc01g103960.3 449 796 834 930 1259 1310 1214 1518 911 727 800 1138 335 750 324 RNA helicase DEAH-box15 AT1G10930 Solyc01g103970.4 1908 628 904 736 459 551 493 382 414 947 823 733 604 918 1629 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) (AHRD V3.3 *** Q0WWX8_ARATH) Solyc01g103980.4 1693 845 1113 1144 1029 1005 1143 771 738 1133 1235 1026 795 926 1398 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) (AHRD V3.3 *** Q93WJ5_ARATH) AT4G33940 Solyc01g103990.3 6755 3433 1516 2424 1530 1764 1522 1718 3001 4213 2816 2256 2535 2975 5391 T-complex protein 11 (AHRD V3.3 *** A0A2U1QKZ8_ARTAN) AT1G22930 Solyc01g104000.3 734 712 733 687 604 640 675 568 747 736 700 616 718 637 784 Serine hydroxymethyltransferase (AHRD V3.3 *** A0A1U8DVN3_CAPAN) AT1G36370 Solyc01g104010.2 20 46 55 41 49 38 25 21 31 26 32 17 20 45 67 BPS1-like protein (AHRD V3.3 *** AT1G22030.1) AT1G22030 Solyc01g104020.2 290 501 273 507 483 465 502 482 481 382 420 415 537 366 337 Embryo-specific protein (AHRD V3.3 *** A0A2K3LK15_TRIPR) AT2G41475 Solyc01g104030.3 1488 1545 1563 2271 1839 1592 1571 1450 1885 1296 2190 904 2020 1537 3627 Potassium channel AKT2 (AHRD V3.3 *** A0A1U8E6Z3_CAPAN) AT4G22200 Solyc01g104040.4 2900 3416 3169 2777 2808 2928 3159 3034 3404 3331 2829 2714 5325 4344 3114 UDP-glucose:glycoprotein glucosyltransferase (AHRD V3.3 *** A0A2I4FV41_9ROSI) AT1G71220 Solyc01g104050.4 523 315 380 318 128 157 163 110 331 420 487 247 251 277 376 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3P6R5_TRIPR) AT1G11050 Solyc01g104060.3 383 367 360 480 517 559 570 427 338 376 438 287 364 433 443 Aminomethyltransferase (AHRD V3.3 *** A0A1J3IXX0_NOCCA) AT1G60990 Solyc01g104070.3 929 1162 669 624 636 579 754 614 523 522 638 527 1011 1079 790 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1NNQ7_ARTAN) AT4G27640 Solyc01g104080.4 936 379 557 433 279 348 299 258 355 627 627 331 459 411 667 Senescence associated gene 18 (AHRD V3.3 *** F4I8F7_ARATH) AT1G71190 Solyc01g104090.4 11 21 30 6 6 10 15 15 27 10 29 18 32 16 21 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QR01_9MAGN) Solyc01g104100.3 12 3 24 30 5 5 4 2 5 14 41 4 18 1 11 11-S seed storage protein (AHRD V3.3 *** A0A2U1KM33_ARTAN) Solyc01g104110.4 5 13 21 8 0 1 0 0 5 11 38 1 6 12 21 11-S seed storage protein (AHRD V3.3 *** A0A2U1KM33_ARTAN) Solyc01g104130.4 639 390 264 292 238 312 337 304 374 399 347 313 406 405 413 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1N614_ARTAN) Solyc01g104140.3 609 588 601 700 451 513 515 408 533 448 660 530 521 722 849 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *** K4B1Y9_SOLLC) AT1G60890 Solyc01g104150.4 20 13 21 24 13 9 4 4 10 2 5 2 17 13 32 Unknown protein Solyc01g104160.4 2158 1317 1674 1409 1157 1291 1253 1050 1227 1060 1603 1048 1284 1494 1848 arginine/glutamate-rich 1 protein (AHRD V3.3 *-* AT1G10890.4) AT1G10890 Solyc01g104170.3 10550 8441 7926 6854 7346 6956 6604 8330 7862 7859 6656 7509 7550 7489 7859 Ankyrin repeat domain-containing protein 2 (AHRD V3.3 *** A0A2G2XWN6_CAPAN) AT2G17390 Solyc01g104180.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 elongation of fatty acids protein 3-like (AHRD V3.3 *** A0A2I4E461_9ROSI) Solyc01g104190.2 214 417 615 524 687 663 681 538 533 272 655 431 405 389 802 maternal effect embryo arrest 9 (AHRD V3.3 *** AT1G60870.1) AT1G60870 Solyc01g104200.4 60 218 206 174 193 313 260 195 234 148 453 115 287 246 83 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A2G2XX62_CAPAN) Solyc01g104220.3 786 867 953 935 1017 1028 978 982 938 1036 890 1009 1010 1001 900 Transmembrane emp24 domain-containing protein p24delta3 (AHRD V3.3 *** A0A2G3AUH9_CAPCH) AT1G09580 Solyc01g104230.4 15 279 331 332 517 532 557 470 244 132 198 267 51 198 122 F-box protein (AHRD V3.3 *** A0A1U8DY68_CAPAN) AT1G10780 Solyc01g104240.3 1098 780 804 989 672 761 594 600 437 736 894 631 602 631 640 Hydroxyproline-rich glycoprotein-like (AHRD V3.3 *-* Q5JLQ2_ORYSJ) Solyc01g104250.4 732 619 738 707 783 823 794 746 596 693 739 793 560 605 654 Rhomboid-like protein (AHRD V3.3 *** A0A2I0WGB8_9ASPA) AT1G25290 Solyc01g104260.3 16 29 62 50 25 25 36 20 28 41 35 33 10 26 63 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1KYA3_ARTAN) Solyc01g104270.4 3044 1937 1325 1600 966 1121 1182 1184 1436 1541 1198 1303 1260 1549 1539 protein RETICULATA-RELATED 1, chloroplastic-like (AHRD V3.3 *** A0A2I4FV19_9ROSI) AT5G24690 Solyc01g104280.2 330 353 371 738 567 513 572 585 322 402 361 398 265 337 353 elongation of fatty acids protein 3-like (AHRD V3.3 *** A0A2I4FV17_9ROSI) AT3G06470 Solyc01g104290.3 10 6 6 18 7 18 8 7 7 6 11 0 11 14 9 Pathogenesis-related thaumatin superfamily protein (AHRD V3.3 *** A0A1P8AMN6_ARATH) Solyc01g104300.3 589 420 406 507 259 361 369 315 445 374 383 331 384 565 489 DUF639 domain-containing protein (AHRD V3.3 *** A0A1Q3AZD2_CEPFO) AT1G71240 Solyc01g104310.3 868 620 643 801 688 759 817 614 729 810 731 768 576 638 650 Patatin (AHRD V3.3 *** A0A2G2W8F3_CAPBA) AT1G33270 Solyc01g104320.4 354 245 311 368 252 314 391 266 428 410 377 440 242 299 363 Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** A0A2U1Q907_ARTAN) Solyc01g104330.1 3 0 0 5 0 1 0 3 0 3 0 0 0 0 0 Unknown protein Solyc01g104340.2 55 52 115 117 84 114 101 77 66 45 83 98 78 82 94 green ripe Solyc01g104350.3 407 365 320 382 284 328 297 284 447 342 321 373 387 343 361 hypothetical protein (AHRD V3.3 *-* AT3G50040.4) Solyc01g104360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g104370.4 2941 7326 6346 5330 5997 6228 6525 5889 4022 3481 4621 4853 9060 7091 5258 60S acidic ribosomal protein P1 (AHRD V3.3 *** A0A2G2W8Q0_CAPBA),Pfam:PF00428 AT4G00810 Solyc01g104380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chemocyanin (AHRD V3.3 *** A0A2G3CNC8_CAPCH) Solyc01g104390.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chemocyanin (AHRD V3.3 *** A0A2G3CNC8_CAPCH) Solyc01g104400.3 444 1330 1022 1146 833 915 818 728 1271 646 639 1408 821 1355 728 Basic blue protein (AHRD V3.3 *** A0A1U8E747_CAPAN) AT2G02850 Solyc01g104410.4 488 265 219 424 194 293 270 296 302 333 223 292 277 365 273 Sterol 3-beta-glucosyltransferase (AHRD V3.3 *** A0A1J3HV40_NOCCA) AT5G24750 Solyc01g104420.1 0 0 0 0 2 0 1 2 1 1 0 5 0 0 0 Unknown protein Solyc01g104430.3 13 10 4 30 16 8 16 22 10 8 7 9 7 19 4 Nucleoporin autopeptidase (AHRD V3.3 --* AT1G59660.3) Solyc01g150156.1 450 347 358 500 358 374 361 325 208 456 394 327 382 310 321 nuclear pore complex protein NUP98A-like isoform X5 (AHRD V3.3 *-* XP_019068100.2) Solyc01g150157.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GATA transcription factor 26 (AHRD V3.3 *-* A0A2G2XLP4_CAPBA) Solyc01g150158.1 1 0 6 1 4 0 0 1 2 5 20 2 3 4 1 Unknown protein Solyc01g150159.1 14 25 45 23 5 6 4 6 7 22 86 16 8 15 30 nuclear pore complex protein NUP98A-like isoform X1 (AHRD V3.3 *-* XP_025885413.1) Solyc01g150160.1 192 123 122 209 68 142 104 93 101 90 144 73 86 97 191 Unknown protein Solyc01g150161.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK-related kinase 5 (AHRD V3.3 *-* A0A2G3AU25_CAPCH) Solyc01g150162.1 11 12 19 9 12 8 15 9 21 35 30 27 5 19 19 Unknown protein Solyc01g104440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g104443.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1Q935_ARTAN) Solyc01g104447.1 5 0 0 2 5 1 0 0 5 3 0 1 5 2 0 Unknown protein Solyc01g104460.4 357 433 433 304 561 499 459 506 417 303 407 492 599 433 325 partner of Y14-MAGO (AHRD V3.3 *** AT1G11400.6) AT1G11400 Solyc01g104470.3 12752 9050 6760 4751 5187 6459 5353 3812 4525 4603 5043 4206 8268 7296 7711 Ribosome assembly factor mrt4 (AHRD V3.3 *** A0A328DGN8_9ASTE) AT1G25260 Solyc01g104480.4 2816 2261 2174 1739 1948 2039 1843 1920 1780 2200 1621 2055 2148 2334 1585 C-jun-amino-terminal kinase-interacting protein (AHRD V3.3 *-* AT1G36990.1) Solyc01g104490.3 155 449 553 653 736 951 953 879 462 371 532 549 201 493 356 Separase (AHRD V3.3 *** A0A1J3GIR9_NOCCA) AT4G22970 Solyc01g104500.2 1504 1059 1074 971 1184 1076 970 1244 998 1347 987 1211 896 928 940 DUF1644 domain-containing protein (AHRD V3.3 *-* A0A1Q3BHE3_CEPFO) Solyc01g104510.3 2473 2818 2762 2587 2597 2840 2857 2502 2205 1942 2427 2495 2991 3182 2379 WD-40 repeat protein AT5G58230 Solyc01g104520.3 3 6 34 17 35 47 57 43 29 20 36 52 1 7 0 Kinetochore protein Ndc80 (AHRD V3.3 *-* A0A2U1PCC6_ARTAN) Solyc01g150163.1 3 9 32 31 73 44 63 29 15 8 37 37 6 21 8 kinetochore protein NDC80 homolog (AHRD V3.3 *-* A0A2I4H4F2_9ROSI) Solyc01g104530.3 2224 1196 1071 1107 918 1045 983 1036 1176 1542 982 1008 1111 1132 1372 MAP kinase kinase kinase 10 Solyc01g104540.3 1141 1018 907 904 934 1085 1029 1009 915 891 810 895 1071 885 955 C-jun-amino-terminal kinase-interacting protein (AHRD V3.3 *-* AT1G36990.1) Solyc01g104550.3 59 95 112 68 46 48 36 37 75 46 149 53 50 86 34 WRKY transcription factor 9 AT1G68150 Solyc01g104560.3 5379 4057 3672 3218 2897 2876 3066 2605 2964 2506 3216 2719 4342 4002 3558 protein-protein interaction regulator family protein (AHRD V3.3 *** AT1G15200.1) AT1G15200 Solyc01g104570.4 632 1228 942 1405 1832 1423 1359 1903 1418 1421 833 1626 979 1240 755 kinetochore protein NDC80 homolog (AHRD V3.3 *** A0A2I4H4F2_9ROSI) AT3G54630 Solyc01g104580.3 274 234 283 361 372 265 248 270 299 265 239 227 235 205 274 Late embryogenesis abundant protein (AHRD V3.3 *** A0A200Q6I0_9MAGN) AT2G01080 Solyc01g104590.3 9775 15571 11681 10384 11509 11390 12008 12385 9076 8534 8429 10378 15503 13490 10890 ribosomal protein L3 AT1G61580 Solyc01g104595.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc01g104600.4 398 584 781 562 640 552 602 597 561 450 562 528 595 680 623 COP9 signalosome complex subunit 8 (AHRD V3.3 *** A0A2I4GE15_9ROSI) AT4G14110 Solyc01g104620.4 0 3 0 0 0 1 0 0 0 0 0 0 1 0 0 Unknown protein Solyc01g104630.3 566 498 513 438 402 440 475 363 341 371 480 418 553 551 538 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8E783_CAPAN) AT2G06000 Solyc01g104640.3 747 1057 878 757 827 829 820 916 672 564 605 848 1176 1275 867 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B6E0_ARATH) AT4G15570 Solyc01g104650.3 1466 724 577 444 287 268 203 231 477 756 532 488 1178 880 1011 ABSCISIC ACID-INSENSITIVE 5-like protein 5 (AHRD V3.3 *** A0A2I4GE24_9ROSI) Solyc01g104660.3 930 643 446 481 373 397 377 450 478 588 480 418 595 469 580 Plant/F1M20-13 protein (AHRD V3.3 *** A0A072UZK1_MEDTR) Solyc01g104670.3 2774 2274 3437 2860 2857 3058 2849 2428 2673 2655 4048 2529 2402 2707 2830 Tubby-like F-box protein (AHRD V3.3 *** A0A2G2XVV2_CAPAN) AT1G25280 Solyc01g104680.4 1665 5519 3804 4010 4302 4573 4720 4425 3277 2628 3269 3858 6047 4796 3943 Ran protein/TC4 protein ran2a AT5G55190 Solyc01g150164.1 97 53 132 113 39 84 44 51 70 140 166 107 49 70 70 thionin-like protein (AHRD V3.3 *** AT1G25275.1) AT1G25275 Solyc01g104700.4 1938 3691 2660 2606 2931 3407 3049 3131 2434 2257 2496 2780 4283 2986 2618 Ran protein/TC4 protein ran2b AT5G55190 Solyc01g104710.3 330 188 240 295 246 230 144 197 283 339 517 173 156 180 554 thionin-like protein (AHRD V3.3 -** AT1G25275.2) AT1G25275 Solyc01g104720.3 205 123 204 317 174 157 144 93 337 270 525 146 181 220 985 thionin-like protein (AHRD V3.3 -** AT1G25275.1) AT1G25275 Solyc01g150165.1 20 2 15 19 7 5 8 6 6 20 27 21 46 16 48 transmembrane protein 184C (AHRD V3.3 *-* XP_010316698.1) Solyc01g104740.3 151 62 81 29 15 34 15 27 46 81 103 41 216 76 81 Multiprotein-bridging factor 1c (AHRD V3.3 *** A0A1U8F6N4_CAPAN) AT3G24500 Solyc01g104750.4 46 71 26 37 6 5 12 11 35 60 18 42 26 53 82 WAT1-related protein (AHRD V3.3 *** K4B247_SOLLC) AT1G25270 Solyc01g104760.2 149 99 65 46 37 39 36 33 85 66 84 50 52 176 200 Sequence-specific DNA binding transcription factor (AHRD V3.3 *** A0A2K3PC30_TRIPR) Solyc01g104770.4 475 347 166 278 185 166 130 142 268 206 135 140 277 226 410 Actin-related protein (AHRD V3.3 *** A0A200RCC6_9MAGN) Solyc01g104780.3 21 35 28 57 33 39 28 19 11 27 22 13 56 74 86 Vacuolar iron transporter-like protein (AHRD V3.3 *** A0A2K3NGY4_TRIPR) Solyc01g104790.4 704 520 380 497 330 371 398 419 444 521 315 424 525 533 467 LOW QUALITY PROTEIN: uncharacterized protein LOC8271878 (AHRD V3.3 *-* XP_025013952.1) Solyc01g104800.2 0 0 1 0 0 2 0 0 0 0 0 0 0 1 0 Vacuolar iron transporter-like protein (AHRD V3.3 *** A0A2K3NGY4_TRIPR) AT3G25190 Solyc01g104810.2 0 0 0 0 6 0 0 1 0 0 0 0 0 0 0 Vacuolar iron transporter-like protein (AHRD V3.3 *** A0A2K3NGY4_TRIPR) AT3G25190 Solyc01g104820.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar iron transporter-like protein (AHRD V3.3 *** A0A2K3NGY4_TRIPR) AT3G25190 Solyc01g104830.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar iron transporter-like protein 3 (AHRD V3.3 *** A0A2G2W8U2_CAPBA) Solyc01g104840.4 2131 2190 2230 1819 2132 2965 2714 2294 1600 1622 1871 1936 2361 2108 1989 RNA-binding protein (AHRD V3.3 *-* O24106_NICGU) Solyc01g104850.3 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 Carboxypeptidase (AHRD V3.3 *** A0A1U8HG02_CAPAN) Solyc01g104860.3 0 6 12 27 0 1 5 7 9 5 9 10 0 3 5 Peroxidase (AHRD V3.3 *** K4B258_SOLLC) AT4G25980 Solyc01g104870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *-* A0A2U1N0Z9_ARTAN) AT1G03050 Solyc01g104880.3 200 148 175 164 37 49 27 43 104 151 99 79 191 164 184 Phosphatidylserine decarboxylase proenzyme 2 (AHRD V3.3 *** A0A2G3AWK6_CAPCH) AT5G57190 Solyc01g104890.4 95 103 94 79 79 124 105 83 61 128 133 107 56 56 118 Unknown protein Solyc01g104900.3 90 17 61 48 68 79 73 39 60 42 155 37 2 22 113 NAC domain-containing protein (AHRD V3.3 *** A0A2U1K9C2_ARTAN) AT5G64530 Solyc01g104910.3 4977 1904 731 1138 855 934 934 818 1240 1959 1136 849 936 1106 1333 protein kinase family protein (AHRD V3.3 *-* AT4G12020.3) AT5G64550 Solyc01g104920.3 1854 2018 2039 1866 2115 1992 2138 2473 2212 2445 1540 1892 2638 2013 1570 Vesicle-fusing ATPase (AHRD V3.3 *** A0A2G3C862_CAPCH) AT4G04910 Solyc01g104930.3 78 59 60 50 27 34 33 13 32 50 45 57 30 68 58 Vesicle-fusing ATPase (AHRD V3.3 *-* A0A2G2ZB55_CAPAN) Solyc01g104940.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein (AHRD V3.3 *** A0A2G3B5C9_CAPCH) Solyc01g104950.4 1786 1378 1802 865 2666 2145 2583 2511 1481 3265 2827 1042 586 818 1110 LEXYL2 AT5G64570 Solyc01g104970.3 919 959 657 662 671 705 686 852 781 917 784 757 936 837 618 Receptor-like kinase (AHRD V3.3 *** A0A0K9PIY0_ZOSMR) AT4G33430 Solyc01g104980.4 1588 1066 934 1190 805 953 825 773 860 1096 931 762 874 966 1281 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1U8E5W2_CAPAN) AT1G22040 Solyc01g104990.4 173 162 174 163 178 225 214 196 181 165 153 180 136 151 165 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (AHRD V3.3 *** A0A1P8ASE3_ARATH) Solyc01g105000.3 19 19 99 72 56 57 64 53 25 27 81 69 2 42 16 heavy metal-associated isoprenylated plant protein 3-like (AHRD V3.3 *** A0A1S4DQD5_TOBAC) Solyc01g105010.3 393 1251 1408 1115 1708 1465 1716 1729 885 666 1049 984 794 1115 1178 Non-specific lipid-transfer protein-like protein (AHRD V3.3 *** A0A2G2W8U5_CAPBA) AT5G64080 Solyc01g105020.3 381 580 420 500 900 1025 993 1013 756 558 331 638 394 403 350 Protein phosphatase 2C (PP2C)-like domain (AHRD V3.3 *-* A0A200PXZ2_9MAGN) AT4G33500 Solyc01g105030.3 1253 2018 817 1473 3557 3164 3212 3534 1981 2591 847 1623 1466 720 917 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3AWK5_CAPCH) AT1G15820 Solyc01g105035.1 0 0 3 0 7 0 0 0 5 0 0 1 0 1 17 Unknown protein Solyc01g105040.3 281 236 148 177 349 275 276 338 230 213 192 215 300 280 172 Plant organelle RNA recognition domain-containing protein (AHRD V3.3 *** A0A118JTD2_CYNCS) AT3G58520 Solyc01g105050.3 1263 3561 1982 2690 6829 5816 5807 5997 3686 3214 1665 2791 2115 1326 1847 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3AWK5_CAPCH) AT1G15820 Solyc01g105060.3 291 1047 654 1013 1319 895 1018 1465 891 941 539 952 1059 867 380 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (AHRD V3.3 *** A0A2G2X231_CAPBA) AT5G10160 Solyc01g105070.3 19 35 18 17 2 0 0 0 12 9 94 5 3 1 43 LECEVI16G peroxidase precursor Solyc01g105080.2 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1NUU1_ARTAN) Solyc01g105090.3 973 390 411 342 331 347 390 288 359 525 637 372 371 398 646 RNA-binding CRS1 / YhbY (CRM) domain protein (AHRD V3.3 *-* A0A2U1NZ44_ARTAN) AT4G13070 Solyc01g105100.3 1510 1709 1670 1490 1457 1714 1709 1332 1327 1388 1605 1325 1984 1902 2013 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (AHRD V3.3 *** A0A2G2WZZ7_CAPBA) Solyc01g105110.1 1 0 35 33 2 6 1 1 11 0 14 6 0 14 4 cytoplasmic tRNA 2-thiolation protein (AHRD V3.3 *-* AT3G55570.1) Solyc01g105120.4 5638 4781 1135 3750 6131 6680 7427 5621 3218 4822 899 2761 3073 1361 1035 protein LNK1 (AHRD V3.3 *** A0A2I4GGH4_9ROSI) AT5G64170 Solyc01g105130.4 465 475 658 460 589 484 482 421 421 330 525 384 666 588 663 tropomyosin (AHRD V3.3 *** AT5G64180.2) AT5G64180 Solyc01g105140.3 2686 2291 2058 2232 2026 1979 2005 1901 2068 1724 2144 2218 2744 2464 2252 Arginine/serine-rich splicing factor, putative, expressed (AHRD V3.3 *-* Q6AVF4_ORYSJ) AT5G64200 Solyc01g105150.4 471 591 783 642 628 659 695 733 580 503 584 546 649 621 679 Potassium transporter (AHRD V3.3 *** K4B285_SOLLC) AT5G09400 Solyc01g105160.4 1396 2168 2170 1950 2758 2351 2322 3024 2740 2601 2155 3077 2115 2292 1633 Copper-transporting ATPase PAA1, chloroplastic (AHRD V3.3 *** A0A2G2X1Z0_CAPBA) AT4G33520 Solyc01g105180.3 436 248 525 222 131 127 213 103 258 342 436 106 693 312 322 Protein DA1 (AHRD V3.3 *** A0A2I0VSM4_9ASPA) Solyc01g105190.4 4 5 4 1 0 0 0 0 0 0 0 0 43 15 0 protein DA1-related 1-like (AHRD V3.3 *-* XP_004231350.2) Solyc01g105200.2 20 7 9 4 0 0 0 0 2 1 1 2 130 60 4 Protein DA1 (AHRD V3.3 *-* A0A2I0VSM4_9ASPA) Solyc01g105220.3 198 35 91 62 49 60 63 65 71 106 49 86 23 63 42 alternative oxidase 2 AT5G64210 Solyc01g105230.4 813 808 1127 915 958 1036 1038 899 967 796 1093 924 884 1068 1166 Calmodulin-binding transcription activator 2 (AHRD V3.3 *** A0A2G3AUZ8_CAPCH) AT5G64220 Solyc01g105240.3 2382 1388 1472 1251 1011 1046 1069 1120 1311 1593 1247 1337 1321 1480 1642 Ubiquitin carboxyl-terminal hydrolase 46 (AHRD V3.3 *** A0A2G2VAM8_CAPBA) Solyc01g105250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g105260.1 0 0 0 0 3 0 4 0 0 0 0 0 0 0 0 Vacuolar iron transporter-like protein (AHRD V3.3 *** A0A2K3NGY4_TRIPR) Solyc01g105270.4 526 460 448 557 436 459 606 506 375 534 365 536 580 508 374 LeTH2tobamovirus multiplication 1 homolog 2 Solyc01g105280.3 640 624 1147 652 507 595 529 463 664 552 1042 430 619 630 806 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1L906_ARTAN) AT1G34750 Solyc01g105290.3 607 394 263 311 292 256 244 255 311 471 258 285 460 263 267 BTB/POZ domain protein (AHRD V3.3 *** AT3G19920.2) AT5G64230 Solyc01g105300.4 40 96 81 75 76 76 78 53 80 140 87 54 37 45 187 Metacaspase-1 (AHRD V3.3 *** A0A2G2VS93_CAPBA),Pfam:PF00656 AT5G64240 Solyc01g105310.3 5 88 74 66 15 5 2 6 20 91 48 11 14 7 42 Metacaspase-1 (AHRD V3.3 *** A0A2G2VS93_CAPBA),Pfam:PF00656 AT5G64240 Solyc01g105320.4 90 26 69 44 23 15 22 13 29 30 52 14 23 33 66 Metacaspase-1 (AHRD V3.3 *** A0A2G3AV17_CAPCH),Pfam:PF00656 Solyc01g105330.3 1059 559 420 506 342 310 338 413 391 871 390 489 483 563 374 Methyl-CpG binding domain protein (AHRD V3.3 *-* A0A2K3LPB7_TRIPR) Solyc01g105340.4 2121 2697 2580 2717 2541 2831 2475 2251 2521 2062 2733 2358 2505 2895 2868 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G2VAL8_CAPBA) AT2G22360 Solyc01g105350.3 0 4 9 13 0 2 1 1 2 1 0 6 10 5 14 Glycosyltransferase (AHRD V3.3 *** A0A1Q3B719_CEPFO) Solyc01g105360.3 128 206 169 234 89 100 71 81 393 539 534 696 207 282 378 Glycosyltransferase (AHRD V3.3 *** A0A2I4DYG0_9ROSI) Solyc01g105370.4 351 418 364 270 215 261 250 195 293 576 280 258 1621 438 540 2-nitropropane dioxygenase-like protein (AHRD V3.3 *** Q9FMG0_ARATH) AT5G64250 Solyc01g105380.1 0 1 0 0 0 0 0 0 0 2 1 1 0 0 29 phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic (AHRD V3.3 *-* XP_004230644.2) Solyc01g105383.1 7 11 1 9 0 0 0 0 0 0 0 0 6 6 46 Phospho-2-dehydro-3-deoxyheptonate aldolase (AHRD V3.3 *** A0A2G3AV10_CAPCH) Solyc01g105387.1 11 0 6 0 0 0 0 5 1 2 0 0 0 0 0 ABC transporter G family member 11 (AHRD V3.3 *** A0A2G3AV03_CAPCH) Solyc01g105410.4 12728 3866 2279 1509 690 731 700 887 1767 7167 3849 2893 2674 2274 2074 Protein EXORDIUM-like 2 (AHRD V3.3 *** B1Q489_CAPCH) AT5G64260 Solyc01g105420.4 6640 2221 1222 1904 1117 886 961 1291 1826 3006 1592 1899 1708 1939 2012 Phospho-2-dehydro-3-deoxyheptonate aldolase (AHRD V3.3 *** A0A2G3AV10_CAPCH) AT4G33510 Solyc01g105430.4 79 58 55 112 105 81 59 63 49 60 46 68 62 47 34 Unknown protein Solyc01g105440.1 1 4 0 0 0 0 1 1 0 2 2 0 2 0 2 Unknown protein Solyc01g105450.4 1044 1296 469 770 1161 1195 943 1261 437 981 146 350 1781 470 143 ABC transporter G family member 11 (AHRD V3.3 *** A0A2G2VAJ3_CAPBA) Solyc01g105460.4 449 545 614 586 676 641 718 638 507 509 516 498 595 599 519 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic (AHRD V3.3 *** A0A2G2Y2Y1_CAPAN) AT1G60600 Solyc01g105470.4 176 160 165 186 171 163 187 112 101 118 101 164 128 150 118 Unknown protein Solyc01g105475.1 858 442 505 456 428 504 540 440 327 360 466 440 326 408 320 Unknown protein Solyc01g105490.4 35 26 39 10 19 31 34 43 31 34 15 39 30 18 9 Unknown protein Solyc01g105500.4 9 80 178 259 154 244 228 173 209 93 62 189 4 92 49 1,4-beta-xylanase (AHRD V3.3 *** B6THX1_MAIZE) Solyc01g105510.3 336 369 574 450 464 562 577 469 382 381 349 468 314 462 475 LMBR1-like membrane protein (AHRD V3.3 *** A0A200RDV5_9MAGN) Solyc01g105520.3 149 121 125 144 335 244 337 279 204 155 74 185 77 173 133 DNA helicase (AHRD V3.3 *** A0A2U1PZH1_ARTAN) AT2G14050 Solyc01g105530.3 40 65 125 96 123 152 155 82 44 34 81 87 15 82 74 minichromosome maintenance 9 (AHRD V3.3 *-* AT2G14050.1) Solyc01g105540.4 635 1636 1387 2033 2529 1973 2090 2466 1499 1621 1199 1629 1480 1407 1111 Dicarboxylate transporter 2.1, chloroplastic (AHRD V3.3 *** A0A2G2VAJ2_CAPBA) AT5G64290 Solyc01g105550.1 3 1 0 0 0 0 0 0 0 3 0 0 0 3 7 Acylsugar acetyltransferase (AHRD V3.3 *** K4HRU2_SOLHA) Solyc01g105560.3 455 860 899 649 1077 949 857 1045 1176 896 1062 924 916 838 740 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase AT5G64300 Solyc01g105570.4 284 281 227 260 296 240 300 288 213 234 190 257 230 273 109 U2 small nuclear ribonucleoprotein auxiliary factor-like protein (AHRD V3.3 *** AT5G64010.1) AT5G64010 Solyc01g105580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acylsugar acetyltransferase (AHRD V3.3 *** K4HT13_SOLHA) Solyc01g105590.2 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 Acylsugar acetyltransferase (AHRD V3.3 *** K4HRD2_SOLHA) Solyc01g105600.3 7 0 10 12 1 0 6 4 3 7 38 2 1 1 9 hypothetical protein (AHRD V3.3 *-* AT2G14095.1) AT2G14095 Solyc01g105610.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LC40_ARTAN) Solyc01g105620.4 73 35 5 46 5 12 14 13 17 14 8 7 40 69 31 RING/U-box superfamily protein (AHRD V3.3 *-* F4JJ02_ARATH) Solyc01g105630.4 36 17 9 4 0 0 0 1 2 1 18 1 4 17 1 Calmodulin (AHRD V3.3 *** A0A1U8DW89_CAPAN) Solyc01g105650.4 1 22 0 3 2 2 0 0 0 7 1 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MCV6_ARTAN) Solyc01g105660.4 242 262 181 329 69 38 29 28 143 102 79 58 281 121 170 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4INZ9_ARATH) Solyc01g105670.3 1455 1270 1787 1758 1948 2358 2492 2210 1844 1317 1494 1735 1328 1729 1567 Serine/threonine-protein kinase PEPKR2 (AHRD V3.3 *** A0A2G2Y344_CAPAN) AT1G12680 Solyc01g105680.4 116 141 230 188 71 84 161 72 95 132 201 47 203 258 756 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1PJR6_ARTAN) AT5G64330 Solyc01g105690.2 422 617 469 554 608 780 823 572 585 363 428 323 436 544 896 transcription factor bHLH143-like (AHRD V3.3 *** A0A2I4HEY9_9ROSI) Solyc01g105700.3 272 470 303 397 575 539 522 486 386 331 320 313 289 391 399 Myc-type, basic helix-loop-helix (BHLH) domain-containing protein (AHRD V3.3 *-* A0A2U1NNA1_ARTAN) AT5G50011 Solyc01g105710.3 808 1398 1645 1685 1988 1725 1916 1742 2008 1201 1720 1671 1708 1812 1861 FK506 binding protein 12 AT5G64350 Solyc01g105720.2 329 763 612 825 2420 2725 2285 2233 1311 1405 1121 1173 749 935 1422 hypothetical protein (AHRD V3.3 *** AT1G58120.1) Solyc01g105730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nucleoporin autopeptidase (AHRD V3.3 *-* AT1G10390.3) Solyc01g105740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 IgA FC receptor (AHRD V3.3 --* A0A1J3EIS4_NOCCA) Solyc01g105750.1 0 0 6 6 1 10 7 10 5 14 3 19 0 0 8 cornifin alpha-like (AHRD V3.3 --* XP_022010045.1) AT5G09520 Solyc01g105760.1 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 protein PELPK1-like (AHRD V3.3 *-* XP_004231361.1) Solyc01g105763.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc01g105767.1 21 16 8 29 3 2 2 3 65 16 146 25 127 122 80 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* AT5G09530.1) AT5G09530 Solyc01g105770.2 28 22 56 89 21 27 22 80 109 24 137 62 102 107 84 IgA FC receptor (AHRD V3.3 *-* A0A1J3K238_NOCCA) AT5G09530 Solyc01g105780.4 2988 2338 1661 1989 2411 2135 1881 3275 2951 3515 1540 3389 2065 1935 1471 DnaJ domain-containing protein (AHRD V3.3 *-* A0A2U1PVJ7_ARTAN) AT5G64360 Solyc01g105790.3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g105800.4 777 815 750 682 754 574 880 606 1072 789 1299 736 1295 797 896 MADS-box protein JOINTLESS (AHRD V3.3 *** A0A2G3AWN8_CAPCH) Solyc01g105810.4 3 3 10 2 37 5 7 12 6 5 2 17 11 6 8 GDP dissociation inhibitor AT5G09550 Solyc01g105820.3 1021 630 693 682 566 626 739 589 582 594 640 498 550 648 777 Unknown protein Solyc01g105850.3 6 7 44 18 3 6 6 2 10 15 13 4 5 16 8 (-)-camphene/tricyclene synthase, chloroplastic (AHRD V3.3 *** A0A2G3AWS7_CAPCH) Solyc01g105860.3 22 1 55 37 11 5 11 3 13 17 73 12 17 38 33 (-)-camphene/tricyclene synthase, chloroplastic (AHRD V3.3 *-* A0A2G3AWN9_CAPCH) Solyc01g105870.3 0 0 0 1 0 2 1 0 2 0 4 0 3 0 0 (-)-camphene/tricyclene synthase, chloroplastic (AHRD V3.3 *** TPS3_SOLLC) AT3G25830 Solyc01g105880.4 5 26 13 133 33 9 18 10 10 7 0 1 24 12 166 Monoterpenoid synthase 2 AT3G25830 Solyc01g105890.3 79 297 70 72 143 107 86 77 434 643 627 501 115 80 48 Monoterpene synthase 1 AT3G25830 Solyc01g105900.2 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 Beta myrcene/limonene synthase (AHRD V3.3 *** G1JUH4_SOLLC) AT3G25830 Solyc01g105910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cineol synthase (AHRD V3.3 *-* G1JUH5_SOLLC) Solyc01g105920.3 7 15 1 20 1 6 3 9 22 18 25 11 3 6 3 Beta myrcene/limonene synthase (AHRD V3.3 *** G1JUH4_SOLLC) AT3G25830 Solyc01g105930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-phellandrene synthase (AHRD V3.3 *-* Q1XBU4_SOLLC) Solyc01g105940.3 80 90 160 150 252 182 189 173 51 53 76 89 73 43 85 Linalool synthase (AHRD V3.3 *-* Q1XBU5_SOLLC) Solyc01g105950.3 2 1 0 0 8 1 3 2 1 3 0 0 0 0 0 Linalool synthase (AHRD V3.3 *-* Q1XBU5_SOLLC) Solyc01g105960.2 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 Cineol synthase (AHRD V3.3 *** G1JUH5_SOLLC) Solyc01g105970.3 1953 1383 1911 1939 1546 1451 1441 1348 1402 2134 2329 1373 1766 1602 2450 Magnesium-dependent phosphatase 1 (AHRD V3.3 *** A0A1J3GPG9_NOCCA) AT2G14110 Solyc01g105980.3 584 668 763 714 858 793 829 715 612 526 552 717 617 636 713 vacuole protein (AHRD V3.3 *** AT4G33625.1) AT4G33625 Solyc01g105990.3 2572 1989 1834 2236 1804 1923 2124 1673 1827 2020 2192 1753 1753 1968 2144 Protein EXECUTER 1, chloroplastic (AHRD V3.3 *** A0A2G3AWR1_CAPCH) AT4G33630 Solyc01g106000.4 1442 914 1333 1913 1021 951 1402 788 1859 1694 1789 1596 2097 2138 2686 Nicotinamidase 1 (AHRD V3.3 *** A0A1U8DWC4_CAPAN) AT2G22570 Solyc01g106010.3 899 436 582 648 498 530 576 409 424 697 751 489 432 509 726 Fructose-1,6-bisphosphatase (AHRD V3.3 *** B6SRX9_MAIZE) AT5G64380 Solyc01g106020.3 766 850 695 565 660 528 641 666 632 622 638 563 1094 827 647 KH domain-containing protein (AHRD V3.3 *** A0A2I0WKQ9_9ASPA) Solyc01g106030.4 929 754 881 750 786 830 820 782 677 889 720 779 803 962 998 GATA transcription factor 28 (AHRD V3.3 *** A0A2G3AWS2_CAPCH) AT1G51600 Solyc01g106040.3 139 128 229 151 135 145 162 117 161 99 218 183 130 240 161 GATA transcription factor 24 (AHRD V3.3 *** A0A2G3AWR4_CAPCH) Solyc01g106050.4 2045 2182 2555 2358 2162 2436 2549 2278 2149 1902 2021 2040 2244 2638 2663 Dynamin-related protein 3B (AHRD V3.3 *** A0A2G2Y3C9_CAPAN) AT4G33650 Solyc01g106055.1 475 452 599 518 582 640 600 546 578 606 455 689 526 567 460 Receptor-like protein kinase (AHRD V3.3 *-* A0A2K3NHR2_TRIPR) Solyc01g106060.3 268 276 558 486 177 213 239 226 621 588 1036 789 449 516 841 Glutamine amidotransferase (AHRD V3.3 *** A0A200PUF5_9MAGN) AT2G23970 Solyc01g106070.2 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 Putative endonuclease or glycosyl hydrolase (AHRD V3.3 --* AT5G61180.1) Solyc01g106080.4 1784 1509 1686 1747 1503 1718 1673 1503 1990 1463 1890 1569 1885 2050 1816 Methylmalonate-semialdehyde dehydrogenase (AHRD V3.3 *** A0A200PUD7_9MAGN) AT2G14170 Solyc01g106090.3 277 271 261 188 333 323 318 285 204 236 283 267 235 242 185 PsbP domain-containing protein 1, chloroplastic (AHRD V3.3 *** A0A2G3BUZ8_CAPCH) AT4G15510 Solyc01g106100.2 97 138 191 220 209 239 242 219 167 179 194 183 155 141 216 Zein-binding domain-containing protein (AHRD V3.3 *** A0A1Q3CXG5_CEPFO) AT1G18265 Solyc01g106110.2 368 286 234 263 279 277 234 211 228 302 281 257 295 284 320 F-box protein PP2-B10 (AHRD V3.3 *** A0A2G3BV22_CAPCH) Solyc01g106130.1 0 2 3 0 1 0 3 1 0 0 0 0 0 6 4 F-box protein family-like (AHRD V3.3 *** Q6ZCS3_ORYSJ) Solyc01g106140.2 1 5 8 0 32 43 71 38 3 1 14 12 0 7 0 F-box protein (AHRD V3.3 *-* A0A2K3NB03_TRIPR) Solyc01g106150.1 5 7 5 5 8 8 5 6 7 0 2 0 15 17 0 Interferon-related developmental regulator (AHRD V3.3 *** A0A200QG19_9MAGN) Solyc01g106160.3 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 Lectin receptor kinase-like protein (AHRD V3.3 *** S8CIF7_9LAMI) Solyc01g106170.4 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 MADS box transcription factor AGAMOUS (AHRD V3.3 *-* A0A1Q1NK16_PAELC) Solyc01g150166.1 2028 716 1637 1673 474 518 704 270 1123 826 2303 982 542 961 1502 Unknown protein Solyc01g150167.1 2 0 5 0 14 3 2 3 1 1 9 1 0 2 1 MADS-box transcription factor 27 (AHRD V3.3 *** A0A2G2Y3D7_CAPAN) Solyc01g150168.1 40 29 62 40 14 17 33 29 60 17 38 43 24 31 16 Unknown protein Solyc01g106180.3 2 0 0 0 0 6 1 2 0 1 3 5 1 0 0 BEST plant protein match is: (TAIR:plant.1) protein, putative (AHRD V3.3 -** G7INX9_MEDTR) AT4G28180 Solyc01g106190.4 357 265 227 297 309 312 308 307 208 258 130 351 250 329 340 heat shock protein (AHRD V3.3 *** AT5G09580.1) AT5G09580 Solyc01g150169.1 1 7 24 20 2 1 1 3 4 12 1 27 0 1 11 Oligopeptide transporter (AHRD V3.3 *-* A0A200QXQ7_9MAGN) Solyc01g106200.3 0 0 0 0 7 0 0 4 0 2 4 10 0 6 0 Oligopeptide transporter (AHRD V3.3 *-* A0A200QXQ7_9MAGN) Solyc01g106210.3 2970 4738 3161 2316 2402 2285 2382 2618 2960 1861 1912 2572 5795 4689 3028 Heat shock protein 70 kDa (AHRD V3.3 *** A0A2K3MZA1_TRIPR) AT5G09590 Solyc01g106220.4 6176 6332 4637 4143 3991 4047 4335 4266 4784 4197 3624 4419 5680 6416 5031 DNA polymerase V (AHRD V3.3 *** A0A2I4F5F3_9ROSI) AT5G64420 Solyc01g106250.4 30 28 48 51 29 18 6 13 19 22 20 29 28 18 26 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3CKL9_CEPFO) AT5G60140 Solyc01g106260.3 838 2347 1894 1539 1597 1581 1672 1654 1727 943 1330 1475 2503 2301 1329 Heat shock protein 70 kDa (AHRD V3.3 *** A0A2K3MZA1_TRIPR) AT5G09590 Solyc01g106270.1 2 5 0 0 0 3 0 1 1 0 0 1 0 1 2 DNA polymerase V family (AHRD V3.3 *-* A0A2U1NZ70_ARTAN) Solyc01g106280.3 7242 7997 11423 8542 7442 7848 8673 7871 8366 6856 13150 7825 9438 9443 12270 PSTVd RNA-biding protein AT5G65630 Solyc01g106290.3 188 77 322 103 101 119 103 85 78 110 280 118 74 86 114 Unknown protein Solyc01g106300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g106310.3 44 41 71 87 34 41 29 20 31 50 77 42 41 43 58 Unknown protein Solyc01g106320.2 4326 4260 4357 3951 3904 3354 3395 3963 4910 3768 4777 3908 5245 4678 5386 Phox/Bem1p (AHRD V3.3 *** A0A200QI01_9MAGN) AT5G64430 Solyc01g106330.3 500 653 937 1148 1197 1144 1231 961 1312 927 1349 985 699 795 1520 Glutamyl-tRNA(Gln) amidotransferase subunit A (AHRD V3.3 *** A0A2U1LC75_ARTAN) AT5G64440 Solyc01g106340.3 99 73 83 89 26 35 55 34 54 61 54 43 84 88 83 Glutamyl-tRNA(Gln) amidotransferase subunit A (AHRD V3.3 *** A0A2U1LC75_ARTAN) AT5G64440 Solyc01g106350.4 394 302 297 290 135 135 180 155 339 533 380 282 533 361 298 Fatty acid amide hydrolase (AHRD V3.3 *** A0A2G2Y3D5_CAPAN) Solyc01g106360.3 2429 3056 4227 4395 3291 4023 4197 3123 4113 3776 4120 4454 3505 4096 3536 Fatty acid amide hydrolase (AHRD V3.3 *** A0A2G3BV42_CAPCH) AT5G64440 Solyc01g106370.3 172 193 276 169 238 237 215 264 191 180 243 189 205 256 158 Protein trichome birefringence-like 12 (AHRD V3.3 *** A0A2G2W8Y8_CAPBA) AT5G64470 Solyc01g106380.2 37 72 46 80 82 82 65 89 75 80 133 74 80 67 55 hypothetical protein (AHRD V3.3 *** AT5G64480.2) AT5G64480 Solyc01g106390.3 326 239 329 224 147 211 180 134 200 170 904 198 214 247 509 Glutamyl-tRNA reductase (AHRD V3.3 *** A0A2G2Y3E1_CAPAN) AT1G58290 Solyc01g106400.3 41 65 146 76 51 78 88 84 78 100 108 84 34 86 153 Peptide-methionine (R)-S-oxide reductase (AHRD V3.3 *** A0A2G2W8Z3_CAPBA) Solyc01g106410.3 50 32 61 14 22 25 20 13 6 18 25 19 12 39 28 NBS-LRR resistance protein (AHRD V3.3 *** A0A2K3NXD2_TRIPR) Solyc01g106420.3 677 449 642 609 555 600 560 566 548 740 539 601 403 459 477 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1NYT6_ARTAN) AT5G64500 Solyc01g106430.3 1073 2592 2062 1762 3199 2538 2606 3423 2766 2135 1906 2526 2380 1868 1693 Inorganic pyrophosphatase (AHRD V3.3 *** A0A2G2W8Z5_CAPBA) AT5G09650 Solyc01g106440.3 566 491 363 528 490 521 479 521 549 534 475 499 473 532 472 S-acyltransferase (AHRD V3.3 *** A0A2G2W8Y7_CAPBA) AT2G14255 Solyc01g106450.3 1025 975 1043 1002 1023 1089 1177 984 986 984 1142 996 834 1071 1201 L-galactose dehydrogenase (AHRD V3.3 *** A0A2G3BV20_CAPCH) AT4G33670 Solyc01g106460.4 0 0 0 7 0 0 0 0 9 3 4 3 0 1 4 bHLH transcription factor 007 AT4G37850 Solyc01g106470.3 1005 833 385 721 1682 1379 1363 1467 649 1508 402 1101 974 454 344 Tunicamycin induced protein (AHRD V3.3 *** Q84JN2_ARATH) AT5G64510 Solyc01g106480.4 1406 1552 1213 1235 1442 1255 1248 1562 2168 2080 1458 1572 1161 1015 1227 glyoxisomal malate dehydrogenase Solyc01g106500.4 87 93 61 21 15 18 11 7 70 121 71 30 80 104 78 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q659_ACTCH) AT1G09970 Solyc01g106510.2 0 0 0 0 0 0 0 0 0 9 1 0 12 7 0 F-box domain-containing protein/DUF295 domain-containing protein (AHRD V3.3 *** A0A1Q3CTB5_CEPFO) Solyc01g106520.1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 F-box SKIP23-like protein (DUF295) (AHRD V3.3 *** AT3G25750.2) Solyc01g106530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ascorbic acid mannose pathway regulator%2C putative (DUF295) (AHRD V3.3 --* AT2G17690.1) Solyc01g106540.4 71 899 892 1230 2526 2460 2327 2654 1099 456 1041 1230 98 659 470 neurofilament heavy protein (AHRD V3.3 *-* AT4G17000.3) AT4G17000 Solyc01g106550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g106560.4 655 442 523 559 663 609 549 384 386 473 663 477 432 448 615 G patch domain protein (AHRD V3.3 *** AT4G33690.1) AT4G33690 Solyc01g106570.3 1698 1228 953 1027 640 767 610 763 1351 1157 869 950 1618 1401 1059 DUF21 domain-containing protein (AHRD V3.3 *** A0A2G2Y3A4_CAPAN) AT2G14520 Solyc01g106575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc01g106580.3 352 1404 1045 1126 1833 1757 1893 2010 1408 1289 1271 1502 1318 1267 1313 transmembrane protein (AHRD V3.3 *** AT3G49720.3) AT5G65810 Solyc01g106590.4 264 288 309 290 408 354 376 313 311 315 340 336 259 318 292 Protein trichome birefringence-like 13 (AHRD V3.3 *** A0A1U8E7U9_CAPAN) AT2G14530 Solyc01g106600.2 0 1 7 0 0 0 2 3 0 0 0 1 2 0 0 Pathogenesis-related protein 1 (AHRD V3.3 *** E2GEU1_9ROSI) Solyc01g106605.1 13 2 0 5 0 0 0 0 0 0 0 0 0 3 0 Pathogenesis-related protein 1 (AHRD V3.3 *** E2GEU2_9ROSI) AT3G19690 Solyc01g106620.2 5127 1342 1061 1669 8 2 2 2 285 668 495 129 845 1144 2823 pathogenesis-related protein 1-like (AHRD V3.3 *** A0A2I4HRD5_9ROSI) AT2G14580 Solyc01g106640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pathogenesis-related protein 1 (AHRD V3.3 *** E2GEU2_9ROSI) AT1G50060 Solyc01g106650.3 19 18 62 33 50 43 41 17 26 18 66 20 14 27 31 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G2V8Q2_CAPBA) AT2G14620 Solyc01g106680.4 982 1003 1218 835 1241 1197 1129 1153 1263 791 1188 992 1024 994 1107 myb-like protein X (AHRD V3.3 *-* AT4G33740.5) AT4G33740 Solyc01g106690.3 684 477 1386 468 395 505 797 329 622 392 1927 391 431 389 530 DUF1005 domain-containing protein (AHRD V3.3 *** A0A1Q3BZI1_CEPFO) Solyc01g106700.3 38 31 51 27 21 22 26 18 24 29 55 3 50 34 39 MADS-box transcription factor 23 (AHRD V3.3 *** A0A2G2Y5S9_CAPAN) Solyc01g106710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor, MADS-box (AHRD V3.3 *** A0A2U1P6T8_ARTAN) AT5G60440 Solyc01g106720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL62 (AHRD V3.3 *** A0A2G3BV97_CAPCH) AT5G60440 Solyc01g106730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *** A0A2K3L7S8_TRIPR) Solyc01g106740.4 662 845 776 872 607 709 727 698 701 617 696 634 831 847 753 Aspartate--tRNA(Asp/Asn) ligase (AHRD V3.3 *** A0A2G3BV66_CAPCH) AT4G33760 Solyc01g106750.2 86 911 686 1024 1914 1766 1599 2548 1017 708 615 1552 155 483 357 Serine/threonine-protein kinase TOR (AHRD V3.3 *-* A0A2G2V7H7_CAPBA) AT2G16270 Solyc01g106770.4 3601 2693 1702 2198 1826 1855 1859 2127 2357 2286 1637 2186 1930 2347 2096 Serine/threonine-protein kinase TOR (AHRD V3.3 *** A0A0K0XR78_TOBAC) AT1G50030 Solyc01g106780.3 1007 1427 872 894 986 968 923 930 920 700 754 802 1494 1244 955 Pyruvate kinase (AHRD V3.3 *** A0A2G3AVH0_CAPCH) Solyc01g106790.3 434 308 196 407 454 538 481 388 291 372 205 337 400 207 247 Tubulin alpha-6 chain, putative (AHRD V3.3 *** Q8LED1_ARATH) AT1G50020 Solyc01g106800.4 140 155 162 473 97 73 132 90 108 138 294 99 86 166 444 amino acid transporter 1 Solyc01g106810.4 135 96 210 170 187 172 166 170 96 178 105 99 126 130 150 short hypocotyl in white light1 (AHRD V3.3 *-* AT1G69935.1) AT4G33780 Solyc01g106820.3 1080 270 111 184 194 211 158 161 152 332 143 185 151 148 158 Ethylene-dependent gravitropism-deficient and yellow-green-like 3 (AHRD V3.3 *** A0A2U1KYW2_ARTAN) AT1G17870 Solyc01g106830.4 57 27 54 43 17 22 15 29 14 36 39 17 59 13 49 Phytosulfokine (AHRD V3.3 *** A0A2U1MA32_ARTAN) Solyc01g106840.2 6 0 0 0 5 5 3 0 1 0 0 1 0 0 0 Serine/threonine-protein kinase TOR (AHRD V3.3 *-* A0A2G3AVJ6_CAPCH) Solyc01g106850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g106860.4 0 0 0 0 1 0 10 1 0 2 10 3 0 0 1 Serine/threonine-protein kinase TOR (AHRD V3.3 *-* A0A1S3YJ59_TOBAC) Solyc01g106870.4 324 242 292 223 237 223 208 227 219 259 329 264 270 246 486 Receptor-like protein 12 (AHRD V3.3 *-* A0A2P4M348_QUESU) Solyc01g106880.3 153 160 151 158 82 133 104 98 108 102 132 83 227 182 110 Ribosomal RNA small subunit methyltransferase E (AHRD V3.3 *** A0A1J3G4Z5_NOCCA) AT1G50000 Solyc01g106890.2 260 111 301 178 78 78 64 72 171 178 416 126 207 225 268 hypothetical protein (AHRD V3.3 *** AT3G19660.1) AT3G19660 Solyc01g106900.3 1620 1131 919 996 911 854 751 981 1262 1452 954 1043 1015 934 1103 Magnesium transporter MRS2-F (AHRD V3.3 *** A0A2G2V1P4_CAPBA) AT3G19640 Solyc01g106910.4 513 274 294 251 276 359 272 324 327 474 498 378 278 241 594 hypothetical protein (AHRD V3.3 *** AT4G33800.2) AT4G33800 Solyc01g106920.4 0 2 1 2 0 0 2 1 0 0 9 0 1 5 0 Nucleobase-ascorbate transporter 8 (AHRD V3.3 *** A0A1U8DZ27_CAPAN) AT1G49960 Solyc01g106930.3 0 0 0 0 0 0 1 0 0 0 0 3 0 0 0 Unknown protein Solyc01g106940.4 297 176 168 189 131 136 116 132 240 237 224 229 157 214 276 Telomere repeat-binding factor 2 (AHRD V3.3 *-* A0A2G3AVM6_CAPCH) AT1G49950 Solyc01g106950.3 790 520 476 537 421 518 534 390 553 490 536 546 500 625 551 myosin heavy chain-like protein (AHRD V3.3 *** AT2G14680.3) AT2G14680 Solyc01g106953.1 31 22 30 24 14 32 31 12 24 16 27 26 28 16 14 BnaAnng27030D protein (AHRD V3.3 *-* A0A078DNT4_BRANA) Solyc01g106955.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 4 Unknown protein Solyc01g106957.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide-like helical domain, DYW domain protein (AHRD V3.3 *-* A0A2U1NF93_ARTAN) Solyc01g106960.2 7 5 12 3 9 2 8 6 7 7 0 2 5 8 1 Unknown protein Solyc01g106963.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide-like helical domain, DYW domain protein (AHRD V3.3 *-* A0A2U1NF93_ARTAN) Solyc01g106967.1 0 0 2 0 0 4 1 0 0 0 0 0 0 1 3 Unknown protein Solyc01g106970.3 80 47 4 26 0 1 0 0 4 19 6 11 20 5 2 F-box protein (AHRD V3.3 *-* A0A2K3PPT3_TRIPR) Solyc01g106980.2 19 5 5 3 0 1 0 0 1 2 6 0 0 0 0 Endo-1,4-beta-xylanase (AHRD V3.3 *** A0A1J3CP06_NOCCA) Solyc01g106990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endo-1,4-beta-xylanase (AHRD V3.3 *** A0A1J3CP06_NOCCA) AT4G33840 Solyc01g107000.3 0 6 11 2 3 3 0 3 7 0 0 1 0 0 0 Endo-1,4-beta-xylanase (AHRD V3.3 *** A0A1J3CP06_NOCCA) Solyc01g107010.3 32 122 187 189 91 167 223 127 113 78 97 116 101 173 144 DNA polymerase kappa (AHRD V3.3 *** A0A2G2V759_CAPBA) AT1G49980 Solyc01g107020.4 71 86 85 70 88 49 56 51 47 68 69 52 135 103 87 Acyl-CoA N-acyltransferase (AHRD V3.3 *** A0A2U1MJU7_ARTAN) Solyc01g107030.3 2182 1488 1539 1332 1415 1475 1398 1321 1524 1200 1582 1359 1737 1873 1721 cyclin-like protein (AHRD V3.3 *** AT3G19650.1) AT3G19650 Solyc01g107040.3 1095 1043 1023 895 927 1020 1040 923 936 1016 946 960 983 990 1176 Dual-specificity RNA methyltransferase RlmN 1 (AHRD V3.3 *** A0A1J3JZ36_NOCCA) AT3G19630 Solyc01g107050.3 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2K3MRI0_TRIPR) Solyc01g107060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g107070.4 202 93 114 158 64 84 83 32 66 68 177 106 171 143 250 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2K3MRI0_TRIPR) Solyc01g107080.3 12 9 8 7 4 3 0 2 10 6 24 3 23 19 3 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2K3MRI0_TRIPR) Solyc01g107090.2 262 77 83 27 0 1 3 2 10 23 412 23 17 79 148 beta-1%2C4-xylosidase (AHRD V3.3 *** AT3G19615.1) Solyc01g107100.3 13 5 25 11 5 3 3 1 24 15 132 9 6 5 28 beta-1%2C4-xylosidase (AHRD V3.3 *** AT3G19615.1) Solyc01g107120.3 7 1 0 3 2 0 3 2 2 0 3 6 16 10 2 BnaC03g41030D protein (AHRD V3.3 *-* A0A078GC68_BRANA) AT3G19610 Solyc01g107130.4 2639 3081 2670 2366 2278 2802 2604 2581 3203 2773 3018 2989 3504 3150 2809 Vacuolar sorting receptor homolog (AHRD V3.3 *** P93027_ARATH) AT2G14740 Solyc01g107140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor (AHRD V3.3 *** A0A2G2V728_CAPBA) AT2G14760 Solyc01g107150.3 1043 1505 1135 1578 1610 1578 1605 1627 1579 1324 1196 1510 1476 1514 1185 Zinc finger protein-like 1-like protein (AHRD V3.3 *** A0A1J3EQ45_NOCCA) AT2G14835 Solyc01g107160.3 862 1272 1231 1634 2081 2098 2211 1935 914 981 1388 1420 914 1039 935 Mitotic checkpoint protein BUB3, putative, expressed (AHRD V3.3 *** Q75HB5_ORYSJ) AT3G19590 Solyc01g107170.2 1160 190 79 93 19 18 10 12 51 169 212 199 103 180 320 Zinc finger protein (AHRD V3.3 *** A0T3Q5_SOLTU) Solyc01g107180.3 1429 1731 1747 1199 1523 1865 1741 1517 1331 916 1046 1109 1241 1466 1030 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1N5P4_ARTAN) AT2G14820 Solyc01g107190.3 498 232 350 268 717 665 545 506 183 187 378 126 350 285 409 LOB domain-containing protein 38 (AHRD V3.3 *** A0A2G2V731_CAPBA) Solyc01g107200.4 825 960 1185 1160 1456 1506 1458 1324 978 1007 1053 1273 941 1133 766 QWRF motif-containing protein 2 (AHRD V3.3 *** A0A2G2Y2D4_CAPAN) Solyc01g107210.4 142 168 174 133 121 120 149 146 181 163 212 165 174 147 180 transcriptional regulator of RNA polII%2C SAGA%2C subunit (AHRD V3.3 *-* AT4G33890.2) Solyc01g107220.2 2 0 3 8 5 3 12 5 2 6 2 9 7 7 4 extensin-2-like (AHRD V3.3 *-* XP_004231387.1) Solyc01g107230.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g107240.4 487 284 215 318 222 325 284 257 191 333 209 322 213 350 462 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *-* A0A2U1NNX3_ARTAN) Solyc01g107250.3 1691 1228 1544 1029 945 1131 943 1086 1165 1831 1272 1354 2014 1302 813 Leucine-rich repeat receptor-like protein kinase family (AHRD V3.3 *** A0A0K9P218_ZOSMR) Solyc01g107260.4 38 301 141 335 559 522 523 575 327 146 295 327 45 155 216 myosin-2 heavy chain-like protein (AHRD V3.3 *** AT1G49870.1) AT1G49870 Solyc01g107270.4 170 146 142 110 14 27 44 33 37 42 44 56 101 192 168 Phosphoribosylformylglycinamidine synthase (AHRD V3.3 *** A0A2G2Y2D6_CAPAN) Solyc01g107280.3 11 4 44 25 0 0 0 5 2 1 12 2 12 11 62 glutamate racemase (AHRD V3.3 *** AT3G19550.1) Solyc01g107290.3 620 324 816 510 314 273 320 292 391 535 628 335 526 464 546 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1QJN2_ARTAN) AT1G49850 Solyc01g107300.4 656 349 513 351 233 206 199 196 290 352 524 262 314 375 444 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1MLG3_ARTAN) Solyc01g107320.3 215 229 130 180 193 188 185 149 164 158 116 166 158 189 185 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2V732_CAPBA) AT5G02860 Solyc01g107330.4 595 1312 1740 1209 1817 1976 1829 1451 1097 711 1360 1402 1386 1533 1834 SWIB domain-containing protein (AHRD V3.3 *** A0A1Q3C0F4_CEPFO) AT2G14880 Solyc01g107340.4 1089 7465 5470 12771 9190 7068 8623 11113 4932 10985 6880 9532 3766 5528 5376 classical arabinogalactan protein 9 (AHRD V3.3 *-* XP_004230717.1) Solyc01g107350.3 796 1625 1611 1436 1869 1974 1733 1848 1647 1510 1998 1491 1075 1560 1206 DUF620 domain-containing protein (AHRD V3.3 *** A0A1Q3D2E6_CEPFO) AT3G19540 Solyc01g107360.4 848 469 363 281 281 230 222 259 380 565 302 294 384 426 387 WD40 repeat (AHRD V3.3 *** A0A200PS16_9MAGN) AT4G34280 Solyc01g107370.3 1 250 92 136 65 119 170 136 33 13 30 62 11 12 23 Gibberellin-regulated protein (AHRD V3.3 *** K0E174_POPTO) Solyc01g107380.3 5010 2616 2203 2451 2162 1912 1856 1846 2614 2944 2545 2417 2105 2177 3014 MAR-binding filament-like protein (AHRD V3.3 *** O82329_ARATH) AT2G14910 Solyc01g107390.4 224 167 602 96 71 40 35 67 109 446 840 406 25 69 57 Auxin-responsive GH3 product (AHRD V3.3 *** Q05680_SOYBN) AT2G14960 Solyc01g107410.3 1459 1537 1630 1111 1305 1637 1401 1330 1242 1004 1699 1290 1511 1753 1700 Pathogenesis-related homeodomain protein (AHRD V3.3 *-* PRH_PETCR) AT3G19510 Solyc01g107420.2 38 20 49 32 21 43 36 19 29 19 9 24 8 14 56 TIP41-like family protein (AHRD V3.3 *-* A0A068F539_BRANA) Solyc01g107430.2 340 264 152 349 229 216 217 132 156 200 104 76 280 123 333 Zinc finger protein (AHRD V3.3 *** A0A200QZQ7_9MAGN) Solyc01g107440.2 6 0 0 4 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc01g107450.4 443 1099 570 697 880 889 925 994 573 688 563 835 1223 1027 603 hypothetical protein (AHRD V3.3 *-* AT4G34265.6) AT4G34265 Solyc01g107460.2 563 570 4 200 29 22 20 40 189 70 8 49 278 15 3 Neuronal PAS domain protein (AHRD V3.3 *** A0A1P8BBZ0_ARATH) Solyc01g107470.4 77 160 140 176 236 155 217 160 185 143 200 170 204 179 118 Unknown protein Solyc01g107475.1 0 5 1 0 1 1 3 1 0 0 1 0 3 6 15 Unknown protein Solyc01g107490.2 73 61 346 157 209 224 172 212 90 188 129 323 45 114 28 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1Q6P2_ARTAN) AT3G19500 Solyc01g107510.3 1642 1124 1610 1160 907 1241 1436 1073 1056 1068 1264 880 1011 1366 1410 DNA repair protein REV1 (AHRD V3.3 *** A0A2G2Y2A0_CAPAN) AT5G44750 Solyc01g107520.3 37 55 38 44 9 14 11 15 43 21 8 22 80 58 50 Basic secretory protease (AHRD V3.3 *** A0A2G2W939_CAPBA) Solyc01g107530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g107540.4 0 3 0 5 5 0 1 0 0 0 0 3 0 0 1 Plant basic secretory protein (BSP) family protein (AHRD V3.3 *** I3SK49_MEDTR) AT2G15220 Solyc01g107550.3 790 1259 1108 1207 955 1060 1169 1168 1459 1168 1058 1084 1254 1249 1062 Methylthioribose kinase (AHRD V3.3 *** A0A1U8DWU8_CAPAN) AT1G49820 Solyc01g107560.3 318 881 446 742 1031 872 859 939 912 568 524 913 480 687 381 Glycosyltransferase (AHRD V3.3 *** A0A2G2W4I0_CAPBA) AT4G15480 Solyc01g107570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g107580.4 664 725 771 586 543 653 637 545 532 326 571 594 834 867 797 Pseudouridine synthase family protein (AHRD V3.3 *** A0A2U1QNN7_ARTAN) AT3G19440 Solyc01g107590.3 587 526 330 396 616 435 435 508 412 333 184 243 145 205 339 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *** J7FMA4_NICAT) AT4G34230 Solyc01g107600.3 412 573 415 436 548 551 542 549 488 494 361 489 771 581 335 protein unc-50 homolog (AHRD V3.3 *** A0A2I4F7Y3_9ROSI) AT2G15240 Solyc01g107610.4 614 610 739 411 809 575 563 707 567 590 659 618 708 541 583 PRKR-interacting protein 1 (AHRD V3.3 *** A0A2G3BVG8_CAPCH) AT2G15270 Solyc01g107620.4 231 297 257 189 241 309 298 259 181 250 216 216 352 309 283 Reticulon-like protein (AHRD V3.3 *** A0A1U8DZC5_CAPAN) AT2G15280 Solyc01g107630.4 213 287 209 180 292 251 248 272 206 190 182 215 285 240 153 cell division cycle protein 123 homolog (AHRD V3.3 *** A0A2I4EVK3_9ROSI) AT4G05440 Solyc01g107640.3 2527 4242 4303 5249 6258 5303 5600 5409 3862 3858 4074 4751 3924 4385 3686 Protein TIC 21, chloroplastic (AHRD V3.3 *** A0A2G2W952_CAPBA) AT2G15290 Solyc01g107650.3 1173 2937 2520 2856 5272 4304 4468 5324 3750 2887 2576 3120 3549 3182 1757 Ovary receptor kinase 1 (AHRD V3.3 *** S4WIP5_SOLCH) Solyc01g107660.3 203 307 421 431 417 434 508 424 415 327 452 475 285 365 279 Stress enhanced protein 1, chloroplastic (AHRD V3.3 *** A0A2G2W962_CAPBA) AT4G34190 Solyc01g107670.2 1784 2192 2877 2483 1875 1763 1849 1908 3087 2278 2512 1878 3491 2141 1305 Leucine-rich repeat receptor protein kinase (AHRD V3.3 *** A0A2R6Q5Y1_ACTCH) AT2G15320 Solyc01g107680.4 12 19 51 58 37 25 39 42 37 30 13 19 24 54 17 ATP-dependent Clp protease ATP-binding subunit ClpX (AHRD V3.3 *-* A0A2G2V959_CAPBA) Solyc01g107690.4 100 98 332 356 152 175 184 97 142 148 126 120 226 194 291 Unknown protein Solyc01g107700.4 1321 984 1108 1016 629 599 659 656 870 982 915 827 1320 1123 1366 Kynurenine formamidase (AHRD V3.3 *** A0A1J3JDK4_NOCCA) AT4G35220 Solyc01g107710.2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 Late embryogenesis abundant protein-related / LEA protein-like protein (AHRD V3.3 *-* A0A178VGJ3_ARATH) AT3G19430 Solyc01g107720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late embryogenesis abundant protein-related / LEA protein-like protein (AHRD V3.3 *-* A0A178VGJ3_ARATH) AT3G19430 Solyc01g107730.3 788 1609 2119 1400 2425 2421 2160 2215 2084 1472 1414 2224 1158 1693 907 D-type cyclin-2 AT4G34160 Solyc01g107740.3 507 562 555 1100 649 456 575 679 415 756 747 503 392 481 330 C2 domain-containing protein (AHRD V3.3 *** B1Q483_CAPCH) AT4G34150 Solyc01g107750.3 2810 2592 1991 2040 2058 2063 1970 2558 2544 2739 2193 2169 2597 2465 2229 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like (AHRD V3.3 *** A0A2I4FJ12_9ROSI) AT3G19420 Solyc01g107760.4 9 38 39 28 30 25 20 23 16 14 3 14 66 17 22 Cysteine proteinase RD21a (AHRD V3.3 *** A0A2G3BVF2_CAPCH) AT5G43060 Solyc01g107780.4 133 178 7 29 0 0 1 0 9 69 32 0 339 144 133 Glycosyltransferase (AHRD V3.3 *** A0A1Q3DDW3_CEPFO) Solyc01g107790.2 4 3 34 36 0 0 1 2 15 9 27 4 12 7 15 Leucine-rich repeat (AHRD V3.3 *** A0A200QZJ6_9MAGN) AT4G06744 Solyc01g107800.4 284 695 410 688 1025 1035 926 1019 934 1021 617 912 568 460 434 glucuronoxylan 4-O-methyltransferase 1-like (AHRD V3.3 *** A0A2I4H011_9ROSI) Solyc01g107810.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** P93364_TOBAC) AT4G34135 Solyc01g107820.2 1468 1197 439 131 1 13 7 5 167 910 426 102 6154 894 628 TOMATO WOUND-INDUCED 1 AT4G34135 Solyc01g107825.1 12 23 6 6 0 7 4 7 5 12 11 6 60 7 10 Glycosyltransferase (AHRD V3.3 *** P93365_TOBAC) AT4G34135 Solyc01g107850.4 6 13 9 2 6 3 10 7 1 8 37 9 11 5 38 Glycosyltransferase (AHRD V3.3 *-* P93365_TOBAC) Solyc01g107860.3 670 1132 1009 1279 1035 824 1086 1066 965 1107 967 933 1254 1310 857 CBS domain-containing protein-like (AHRD V3.3 *** B8AP73_ORYSI) Solyc01g107870.3 18828 22070 18294 19756 23676 26997 26366 23423 19116 17016 16697 19433 20323 20824 18973 Polyadenylate-binding protein (AHRD V3.3 *** Q9M6E6_TOBAC) AT1G49760 Solyc01g107880.3 7326 4597 3388 3750 3480 3339 3532 4227 4235 6574 3417 4696 3734 3697 3518 Zinc finger, RING-CH-type, Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *** A0A2U1NZJ9_ARTAN) AT4G34100 Solyc01g107890.3 1393 1745 1454 1969 1939 1660 1552 1916 2794 2168 2061 1431 2246 1441 2371 Filament-like plant protein 7 (AHRD V3.3 *** A0A314KPZ1_NICAT) Solyc01g107900.3 838 535 144 348 93 123 91 65 260 371 240 191 599 270 263 O-acyltransferase WSD1-like protein (AHRD V3.3 *** A0A2K3ND41_TRIPR) Solyc01g107910.4 152 166 194 200 387 317 270 281 169 200 149 148 123 136 338 caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2I4EET3_9ROSI) Solyc01g107920.2 13 2 1 3 2 8 5 5 7 6 1 0 2 6 17 Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A200QYS5_9MAGN) Solyc01g107925.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc01g107930.3 361 238 266 249 234 255 241 224 279 283 215 247 277 239 281 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B1Z6_ARATH) AT4G34040 Solyc01g107940.3 455 319 307 314 303 238 282 293 311 365 281 252 320 420 273 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8B1Z6_ARATH) AT4G34040 Solyc01g107950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 008 AT1G49770 Solyc01g107960.4 1 6 5 3 10 17 11 7 18 4 6 15 3 0 0 bHLH transcription factor 009 AT1G49770 Solyc01g107970.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 bHLH transcription factor 077 AT1G49770 Solyc01g107980.3 469 390 356 415 231 237 192 171 350 444 2200 444 322 228 838 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2W990_CAPBA) AT1G49780 Solyc01g107990.3 136 90 177 188 118 140 100 110 170 199 206 163 141 129 187 PI-PLC X domain-containing protein (AHRD V3.3 *** A0A2G2W995_CAPBA) AT1G49740 Solyc01g108000.3 193 264 375 346 374 410 387 415 301 272 288 356 392 308 274 Protein kinase domain (AHRD V3.3 *** A0A200QZI9_9MAGN) AT3G19300 Solyc01g108010.3 880 500 553 651 401 550 604 462 552 547 631 459 419 604 648 Endonuclease or glycosyl hydrolase (AHRD V3.3 *** A0A2U1M201_ARTAN) AT2G15560 Solyc01g108020.3 290 366 460 443 314 479 429 414 474 970 1128 723 406 397 396 Thioredoxin M3, chloroplastic (AHRD V3.3 *** A0A1U8E6Y3_CAPAN) AT2G15570 Solyc01g108030.4 1032 525 678 518 589 772 647 528 546 900 991 586 510 535 650 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial (AHRD V3.3 *** A0A1U8DZI7_CAPAN) AT4G34030 Solyc01g150170.1 23 10 35 39 17 27 32 32 31 40 39 23 23 32 28 Dynamin-related protein 3B (AHRD V3.3 *-* A0A2G2W9Y7_CAPBA) Solyc01g108040.1 30 31 81 45 20 27 39 26 33 43 13 39 27 32 52 Dynamin-related protein 3B (AHRD V3.3 *-* A0A2G2Y090_CAPAN) Solyc01g108050.3 205 131 219 255 91 204 159 98 119 149 195 131 183 123 327 Dynamin-related protein 3B (AHRD V3.3 *-* A0A2G2Y090_CAPAN) Solyc01g108060.2 0 0 0 2 0 1 1 1 1 1 0 2 0 0 9 Methylcrotonoyl-CoA carboxylase (AHRD V3.3 *-* A0A0B2UFQ9_9GAMM) Solyc01g108070.4 919 1081 1402 1312 1307 1414 1462 1071 1033 954 1137 1165 655 1111 1296 Protein DJ-1-like protein C (AHRD V3.3 *** A0A1U8DX25_CAPAN) AT4G34020 Solyc01g108080.4 3160 951 665 1010 683 712 738 777 857 1542 1025 1242 666 956 2186 ABSCISIC ACID-INSENSITIVE 5-like protein 7 (AHRD V3.3 *** A0A2G3BV73_CAPCH) Solyc01g108090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Spire, putative (DUF1685) (AHRD V3.3 *-* Q9ZQF4_ARATH) Solyc01g108100.3 121 34 273 168 21 23 13 13 175 49 275 84 47 136 268 cold regulated protein 27 (AHRD V3.3 *** AT5G42900.2) Solyc01g108110.4 234 261 208 201 244 203 233 227 196 162 244 201 211 257 221 Glycoprotein 3-alpha-L-fucosyltransferase (AHRD V3.3 *** Q70FI9_ORYSJ) AT1G49710 Solyc01g108120.3 261 227 254 257 243 209 232 203 242 241 282 299 291 253 285 B3 domain-containing protein (AHRD V3.3 *** A0A1U8HM78_CAPAN) Solyc01g108130.4 185 123 231 138 129 158 120 121 192 136 209 117 180 183 132 B3 domain-containing protein (AHRD V3.3 *-* A0A2G2W9Y8_CAPBA) Solyc01g108140.4 379 366 523 403 455 564 500 472 369 302 410 537 399 354 449 B3 domain-containing protein (AHRD V3.3 *** A0A1U8E8F3_CAPAN) AT3G19184 Solyc01g108150.3 1333 1285 1074 1093 1170 1097 1047 1418 1876 1862 1300 1400 1740 1604 1485 Zinc-binding alcohol dehydrogenase domain-containing protein 2 (AHRD V3.3 *** A0A1J3FLM3_NOCCA) AT1G49670 Solyc01g108160.3 1485 921 884 789 558 702 682 618 948 1037 767 811 944 949 799 autophagy-related protein 2-like (AHRD V3.3 *** A0A1S4AVK1_TOBAC) AT3G19190 Solyc01g108170.3 218 166 211 361 498 430 296 413 379 243 303 400 269 265 245 BEST plant protein match is: (TAIR:plant.1) protein, putative (AHRD V3.3 *** G7JLA4_MEDTR) Solyc01g108180.4 1192 1212 736 788 896 840 774 874 880 896 716 932 1261 1025 941 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QLP1_9MAGN) AT2G15690 Solyc01g108190.3 128 70 140 139 73 37 45 24 72 79 142 27 66 84 302 Calmodulin-like protein 1 (AHRD V3.3 *** A0A1U8E8F8_CAPAN) AT2G15680 Solyc01g108200.3 66 50 36 49 24 29 32 41 45 48 36 31 33 26 72 Protein disulfide-isomerase SCO2 (AHRD V3.3 *** A0A2G3AT86_CAPCH) AT3G19220 Solyc01g108210.4 532 167 65 114 89 86 78 66 137 364 23 34 219 181 109 Cytochrome P450 (AHRD V3.3 *** A0A200QZB6_9MAGN) AT3G19270 Solyc01g108220.3 34 37 92 16 8 7 33 9 19 33 92 21 13 42 2 Unknown protein Solyc01g108230.3 223 323 259 378 313 361 373 354 251 273 328 311 329 324 297 LAG1 longevity assurance-like protein 2 (AHRD V3.3 *** A0A1U8E8G3_CAPAN) AT3G19260 Solyc01g108235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc01g108240.3 33 39 1326 3 0 0 0 0 4 100 420 43 19 7 53 Ethylene Response Factor D.3 AT4G34410 Solyc01g108250.3 751 456 629 430 367 398 354 323 428 579 746 295 642 461 615 DEM2 AT3G19240 Solyc01g108260.4 2403 2308 2487 1987 2506 2225 2299 2127 2018 1957 1910 2188 2268 2236 1819 EKC/KEOPS complex subunit Tprkb (AHRD V3.3 *** A0A2I4EEJ6_9ROSI) AT4G34412 Solyc01g108270.4 0 2 0 0 7 3 5 2 2 3 0 4 2 2 0 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A0K9NJV0_ZOSMR) AT3G19230 Solyc01g108280.3 1274 926 801 904 874 904 915 770 892 800 634 671 1126 923 1583 Protein kinase (AHRD V3.3 *** O65765_CRAPL) AT4G33950 Solyc01g108290.3 592 628 851 569 672 692 750 545 542 503 856 521 1007 777 755 SWIB/MDM2 domain containing protein (AHRD V3.3 *** B6SZA4_MAIZE) AT3G19080 Solyc01g108300.3 632 476 434 493 775 797 928 612 422 325 523 260 510 682 1183 Two-component response regulator ARR18 (AHRD V3.3 *** A0A2G2W9W9_CAPBA) Solyc01g108310.4 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 La-related protein like (AHRD V3.3 *** A0A2R6RH75_ACTCH) AT3G19090 Solyc01g108320.3 23 28 68 18 27 62 42 31 76 38 74 32 54 33 36 Peroxidase (AHRD V3.3 *** K4B348_SOLLC) AT1G49570 Solyc01g108330.2 127 378 281 252 783 785 696 750 398 256 200 353 539 450 239 transmembrane protein (AHRD V3.3 *-* AT2G26520.1) AT2G26520 Solyc01g108340.3 637 769 741 718 849 871 833 853 696 618 543 671 1016 829 680 Peptidyl-prolyl cis-trans isomerase D (AHRD V3.3 *** A0A2G3BVL2_CAPCH) AT2G15790 Solyc01g108350.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 Cupredoxin (AHRD V3.3 *** A0A2U1P8C5_ARTAN) AT2G15780 Solyc01g108360.4 0 0 0 0 0 0 0 0 4 0 0 0 2 1 0 Cupredoxin (AHRD V3.3 *** A0A2U1P8C5_ARTAN) AT2G15780 Solyc01g108380.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine protease inhibitor, potato inhibitor I-type family protein (AHRD V3.3 *** F4IU00_ARATH) Solyc01g108390.3 69 104 181 280 133 145 156 100 57 103 229 44 157 177 266 Trypsin/subtilisin inhibitor (AHRD V3.3 *** A0A2G3AU57_CAPCH) Solyc01g108400.3 1026 1222 1414 1524 942 972 1056 911 1126 1015 1257 683 1548 1443 1461 CDPK-related protein kinase (AHRD V3.3 *** A0A2G3AU42_CAPCH) Solyc01g108410.3 367 272 239 294 207 230 213 268 324 358 181 215 261 348 302 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8E733_CAPAN) AT5G39710 Solyc01g108412.1 52 67 45 45 9 58 54 26 39 47 47 30 41 34 64 protein unc-13 homolog isoform X1 (AHRD V3.3 *-* XP_019066501.1) Solyc01g108414.1 81 47 15 46 33 33 55 50 35 67 15 51 19 44 24 Unknown protein Solyc01g108416.1 166 70 65 84 54 54 60 66 62 55 51 47 58 58 26 GATA transcription factor 26 (AHRD V3.3 *-* A0A2G3DC77_CAPCH) Solyc01g108418.1 189 63 89 79 58 106 98 67 66 71 80 65 58 65 31 CDPK-related kinase 5 (AHRD V3.3 *-* A0A2G3AU25_CAPCH) Solyc01g108420.2 0 3 1 0 1 3 2 1 2 2 0 0 0 0 1 Unknown protein Solyc01g108430.3 347 367 429 365 416 416 410 361 425 418 443 359 406 418 346 C2H2 and C2HC zinc fingers superfamily protein (AHRD V3.3 *-* F4I3B1_ARATH) AT1G49590 Solyc01g108440.2 288 174 216 129 31 43 17 32 108 194 244 32 260 158 316 Herbivore elicitor-regulated 1 (AHRD V3.3 *** S5ZR43_NICAT) AT2G15760 Solyc01g108450.3 254 122 204 122 95 109 154 109 78 187 113 106 83 76 100 Carboxypeptidase (AHRD V3.3 *** A0A2G2Y3S5_CAPAN) Solyc01g108460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carboxypeptidase (AHRD V3.3 *** A0A2G2Y3S5_CAPAN) Solyc01g108470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Carboxypeptidase (AHRD V3.3 *** A0A2G2Y3S5_CAPAN) Solyc01g108480.1 9 2 12 7 4 1 0 5 2 1 0 0 10 3 13 Carboxypeptidase (AHRD V3.3 *-* A0A2G2Y3S5_CAPAN) Solyc01g108490.3 350 665 365 385 520 431 422 573 958 1249 717 590 1431 562 406 Carboxypeptidase (AHRD V3.3 *** A0A1U8E723_CAPAN) Solyc01g108500.4 10538 8453 8235 8433 7367 9172 8215 6498 7431 8451 8236 6515 9062 7527 9328 RNA-binding protein (AHRD V3.3 *** A0A2K3PBB6_TRIPR) AT3G19130 Solyc01g108510.3 379 407 562 404 367 490 521 352 382 251 628 291 378 446 703 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1PVD3_ARTAN) AT2G15730 Solyc01g108513.1 5 7 12 16 4 4 5 5 15 9 17 13 16 16 10 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KK17_ARTAN) Solyc01g108517.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g108520.2 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KK17_ARTAN) Solyc01g108530.3 266 237 234 283 205 200 213 243 252 250 195 171 312 170 364 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KK17_ARTAN) Solyc01g108540.3 247 119 83 88 45 44 29 53 71 106 66 54 126 137 231 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KC75_ARTAN) AT3G48690 Solyc01g108550.1 2 3 0 3 7 1 1 5 1 0 3 1 4 4 0 Unknown protein Solyc01g108560.4 17 66 114 82 153 132 138 175 86 43 105 64 85 49 51 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KC75_ARTAN) AT3G48690 Solyc01g108570.3 20 42 17 26 47 86 40 86 37 58 29 35 55 21 19 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KC75_ARTAN) AT3G48690 Solyc01g108580.3 207 710 453 578 1028 724 746 1164 1099 747 652 861 765 544 533 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1Q2D0_ARTAN) AT3G48690 Solyc01g108590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g108600.3 1456 1953 1409 1465 1114 1190 1325 1239 1859 1066 1072 1158 2099 2088 1401 Presequence protease chloroplastic/mitochondrial-like (AHRD V3.3 *** A0A2K3NZI3_TRIPR) AT3G19170 Solyc01g108610.3 4 13 41 38 11 9 13 12 21 24 7 14 0 22 7 Cyclin-dependent kinase inhibitor (AHRD V3.3 *** A0A2G2W9Z0_CAPBA) AT1G49620 Solyc01g108620.3 834 339 412 360 344 306 285 259 307 652 322 293 248 322 233 peptidase%2C S9A/B/C family%2C catalytic domain protein (Protein of unknown function DUF829%2C transmembrane 53) (AHRD V3.3 *** AT5G44250.1) AT2G15695 Solyc01g108630.3 367 667 299 547 1174 1077 1177 1230 1119 622 385 441 1421 583 544 nii1 nitrite reductase AT2G15620 Solyc01g108640.1 7 1 5 6 6 1 3 5 9 2 0 6 1 0 1 GDSL esterase/lipase (AHRD V3.3 *** A0A199UQJ3_ANACO) Solyc01g108650.3 214 486 588 484 500 491 517 418 399 290 457 424 502 543 475 embryo defective 1273 (AHRD V3.3 *** AT1G49510.3) AT1G49510 Solyc01g108660.4 909 1148 932 1092 1121 1202 1140 1227 1112 1030 808 1073 1165 1154 1049 N-acetyl-gamma-glutamyl-phosphate reductase (AHRD V3.3 *** A0A1U8E8L1_CAPAN) AT2G19940 Solyc01g108670.4 198 1122 1628 1627 2519 2764 3075 2779 1695 853 1462 1665 237 945 983 Kinesin (AHRD V3.3 *** A0A200QYC3_9MAGN) AT3G19050 Solyc01g108680.4 1 0 0 0 0 5 0 1 0 0 16 0 0 0 0 Methylketone synthase Ib (AHRD V3.3 *** E0YCS5_SOLLC) Solyc01g108710.3 27 45 83 70 127 147 174 73 19 5 59 16 101 53 331 Unknown protein Solyc01g108720.2 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc01g108730.2 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 Methyl jasmonate esterase (AHRD V3.3 *-* Q56SE1_SOLTU) Solyc01g108740.3 4 1 0 3 1 0 1 2 2 0 3 0 5 1 3 Methylketone synthase Ib (AHRD V3.3 *** E0YCS5_SOLLC) Solyc01g108750.2 47 16 21 23 13 4 4 6 21 7 41 12 17 37 48 Methylketone synthase Ib (AHRD V3.3 *** E0YCS5_SOLLC) Solyc01g108760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g108770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 methylesterase 3 isoform X1 (AHRD V3.3 --* XP_015944400.1) Solyc01g108775.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Methylketone synthase Ib (AHRD V3.3 *** E0YCS5_SOLLC) Solyc01g108780.4 0 2 0 0 0 0 0 0 23 74 433 40 4 3 2 Methylketone synthase Ia (AHRD V3.3 *** E0YCS4_SOLLC) Solyc01g108790.3 244 65 0 29 3 0 0 0 3 9 31 0 31 38 50 3-hydroxyisobutyryl-CoA hydrolase 1 (AHRD V3.3 *-* A0A1U8EJT2_CAPAN) Solyc01g108800.4 2 3 0 4 3 6 2 5 7 4 1 13 4 2 0 3-hydroxyisobutyryl-CoA hydrolase 1 (AHRD V3.3 *** A0A2G3BVS1_CAPCH) AT5G65940 Solyc01g108810.3 1 2 6 3 4 14 5 3 4 7 6 3 3 1 28 Methylketone synthase Ib (AHRD V3.3 *** E0YCS5_SOLLC) Solyc01g108820.1 5 0 2 1 0 0 3 1 1 4 0 5 0 10 4 Methylketone synthase Ib (AHRD V3.3 *** E0YCS5_SOLLC) Solyc01g108830.3 0 0 3 0 0 0 0 1 1 4 5 3 3 6 7 Methylketone synthase I (AHRD V3.3 *-* E0YCS2_SOLHA) Solyc01g108835.1 3 1 6 6 0 3 1 0 0 2 0 0 0 6 0 Methylketone synthase Ib (AHRD V3.3 *-* E0YCS5_SOLLC) Solyc01g108840.3 1105 1058 1393 1160 1133 1145 1158 1019 1136 1043 1337 1197 1120 1030 921 Receptor protein kinase (AHRD V3.3 *** A0A2R6PGK7_ACTCH) Solyc01g108850.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor protein kinase (AHRD V3.3 *** A0A2R6RJ70_ACTCH) Solyc01g108860.3 0 0 6 1 1 0 1 0 0 2 6 0 0 0 9 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MKU7_ARTAN) Solyc01g108880.4 175 87 126 136 37 35 38 50 170 138 315 100 115 208 380 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MKU7_ARTAN) AT3G19000 Solyc01g108890.3 5056 4182 4662 6005 4310 4219 4490 4001 3503 4779 4456 4803 4040 4394 4931 BAT2 domain protein (AHRD V3.3 *** AT2G15860.1) AT2G15860 Solyc01g108900.4 2 4 25 2 0 1 23 5 1 3 0 0 1 7 1 pollen leucine rich repeat domain-extensin AT3G19020 Solyc01g108910.4 3148 524 1287 537 89 70 113 79 393 1156 1082 654 307 1335 1406 maternal effect embryo arrest 14 (AHRD V3.3 *** AT2G15890.1) AT2G15890 Solyc01g108920.4 1172 666 692 658 489 590 641 524 593 701 642 633 539 670 622 Phox domain-containing protein (AHRD V3.3 *** F4IJE1_ARATH) AT2G15900 Solyc01g108930.3 7 5 54 46 22 28 11 22 10 17 2 14 0 11 0 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3CJU4_CEPFO) Solyc01g108940.2 0 34 58 49 75 57 104 28 41 4 8 52 5 15 1 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3CKL9_CEPFO) AT5G60140 Solyc01g108950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3CKL9_CEPFO) AT5G60140 Solyc01g108960.1 52 16 37 60 39 25 29 8 31 25 38 20 18 26 40 Mitochondrial-processing peptidase subunit beta (AHRD V3.3 --* A0A2G3B7D4_CAPCH) Solyc01g108970.4 38 29 23 23 6 21 33 18 27 30 11 37 14 18 61 Phox domain-containing protein (AHRD V3.3 *-* A0A2K3PK20_TRIPR) Solyc01g108990.3 87 36 38 41 37 44 34 28 31 28 86 36 13 73 42 B3 domain-containing protein At5g60140-like (AHRD V3.3 *-* XP_019067402.1) Solyc01g109000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein Os12g0591400-like (AHRD V3.3 *-* XP_025884759.1) Solyc01g109010.3 239 177 115 166 129 130 152 88 108 113 157 135 124 207 283 phox domain-containing protein (AHRD V3.3 *-* AT2G15900.1) Solyc01g109020.3 0 2 0 0 0 2 1 0 0 0 0 0 0 1 0 GDSL esterase/lipase 5-like (AHRD V3.3 *** A0A1U8FAQ0_CAPAN) Solyc01g109030.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AP2/B3-like transcriptional factor family protein (AHRD V3.3 --* AT5G25475.3) Solyc01g109040.4 215 1287 1243 1339 1801 1924 2197 1666 1304 928 1372 1248 731 667 918 Cytochrome b6-f complex subunit 7 (AHRD V3.3 *** A0A1U8DXD4_CAPAN) AT2G26500 Solyc01g109050.2 86 76 80 77 115 79 51 87 72 83 61 98 127 119 47 Glycosyl hydrolase family protein 43 (AHRD V3.3 *** A0A2K3PJW0_TRIPR) Solyc01g109060.4 303 253 181 160 140 149 123 178 144 213 146 191 219 225 232 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2W9P4_CAPBA) AT2G15630 Solyc01g109070.2 255 263 287 192 205 270 212 168 165 121 286 168 503 292 260 Diphthamide biosynthesis protein 3 (CSL zinc finger) (AHRD V3.3 *** A0A166Z4Y4_9PEZI) Solyc01g109080.3 1058 866 892 736 756 759 862 900 1181 981 754 846 582 1054 966 Serine/threonine-protein kinase SMG1 (AHRD V3.3 *** A0A2K3NMP5_TRIPR) Solyc01g109090.2 8983 1996 2964 1243 85 118 101 37 850 3551 5536 550 689 2794 11465 Unknown protein Solyc01g109100.2 569 273 274 283 254 178 197 92 164 359 377 175 208 226 401 TMV resistance protein N (AHRD V3.3 *-* XP_020426626.1) Solyc01g109110.3 1191 386 481 309 135 134 143 130 214 484 464 179 407 353 333 Extra-large guanine nucleotide-binding protein 2 (AHRD V3.3 *** A0A1U8DXD5_CAPAN) Solyc01g109120.3 443 497 195 177 127 177 144 131 370 373 213 352 709 446 533 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1MAA7_ARTAN) AT3G18950 Solyc01g109125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) ATMG00240 Solyc01g109130.3 121 299 267 309 397 330 366 346 296 233 274 304 283 265 316 Proteasome assembly chaperone 2 (AHRD V3.3 *** A0A1U8E8Q2_CAPAN) AT3G18940 Solyc01g109135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc01g109140.3 7 8 5 0 0 0 0 0 0 0 0 0 1 14 3 divinyl ether synthase Solyc01g109150.4 13 273 38 104 203 235 165 261 93 61 17 53 151 161 44 cytochrome P450 CYP74C4 Solyc01g109160.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CYP74C4 Solyc01g109170.3 648 132 75 103 28 37 60 33 63 218 81 43 51 139 304 Cold-regulated plasma membrane protein 2 (AHRD V3.3 *** A0A1U8E7A7_CAPAN) Solyc01g109180.4 697 1410 1748 1573 1604 1735 1573 1335 1786 1381 1616 1583 1417 1608 1358 Long chain acyl-CoA synthetase 4 (AHRD V3.3 *** A0A2G2Y3Y7_CAPAN) AT1G49430 Solyc01g109190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g109200.4 560 453 375 401 272 314 259 254 282 313 579 336 319 368 458 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1Q188_ARTAN) AT3G18930 Solyc01g109210.2 960 466 345 564 205 270 230 228 385 736 592 308 367 439 563 Unknown protein Solyc01g109220.4 569 1137 1323 1087 1074 1170 1133 896 725 625 1018 870 1614 1299 1216 Mitochondrial import receptor subunit TOM6-like protein (AHRD V3.3 *** A0A1U8DXE9_CAPAN) AT1G49410 Solyc01g109230.3 107 144 174 168 137 115 104 83 71 162 229 56 91 93 119 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** A0A061E4Q7_THECC) AT2G16050 Solyc01g109240.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein 23 (AHRD V3.3 *** A0A2G2Y2B6_CAPAN) AT3G26660 Solyc01g109250.2 1874 1208 1657 1488 651 412 403 406 679 974 3733 654 825 682 1580 Mitochondrial fission regulator like (AHRD V3.3 *** A0A2R6RH96_ACTCH) Solyc01g109260.3 358 401 313 353 344 380 338 382 365 353 330 341 322 395 322 plastid division protein PDV2-like (AHRD V3.3 *** A0A2I4GTD4_9ROSI) AT2G16070 Solyc01g109270.3 22 304 167 135 277 264 297 306 362 78 200 205 180 168 119 electron transporter%2C putative (Protein of unknown function%2C DUF547) (AHRD V3.3 *** AT5G66600.9) Solyc01g109275.1 11 6 16 25 0 0 0 0 0 14 14 2 14 2 8 Unknown protein Solyc01g109280.3 770 670 630 581 568 685 664 557 646 618 793 698 619 641 740 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WA47_CAPBA) AT2G16090 Solyc01g109290.3 296 339 452 388 268 348 366 301 327 272 333 348 355 399 354 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PZ59_ARTAN) AT4G34360 Solyc01g109300.3 8211 4407 3667 4017 2379 2455 2419 2306 5697 5544 6690 5604 3507 3829 6132 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (AHRD V3.3 *** A0A2L0V4N5_9APIA) AT4G34350 Solyc01g109310.3 25 13 26 35 12 18 11 13 18 23 39 21 8 8 6 Protein DETOXIFICATION (AHRD V3.3 *** A0A200R7E8_9MAGN) Solyc01g109320.4 4 0 0 4 0 0 0 0 0 0 0 0 0 1 19 Protein DETOXIFICATION (AHRD V3.3 *** A0A200R7E8_9MAGN) Solyc01g109330.3 28 22 58 65 22 25 39 24 28 42 42 13 25 38 74 Cytochrome c biogenesis protein CCS1, chloroplastic (AHRD V3.3 *** A0A2G2VTA9_CAPBA) Solyc01g109340.4 392 261 383 360 283 304 282 210 297 464 524 246 331 234 533 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G3D341_CAPCH) Solyc01g109350.3 4540 2986 2387 2263 2204 2295 2272 2237 2249 2559 2009 2230 2713 2597 2726 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1LM82_ARTAN) AT3G18860 Solyc01g109360.3 1597 2225 2105 2001 2319 2481 2628 2384 1920 1741 1837 1870 2757 2371 2176 Tyrosine-tRNA ligase-like protein (AHRD V3.3 *** A0A2K3P3P3_TRIPR) AT2G33840 Solyc01g109370.3 366 384 683 566 746 830 911 604 422 508 747 571 387 455 731 Acyltransferase domain-containing protein (AHRD V3.3 *** A0A1Q3CKP3_CEPFO) AT3G18850 Solyc01g109380.3 364 409 731 454 493 498 541 372 730 455 777 587 470 417 501 UPF0496 protein (AHRD V3.3 *** A0A2K3LR63_TRIPR) AT4G34320 Solyc01g109390.3 2 202 134 227 334 303 355 291 192 76 165 169 135 250 41 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** Q8GXG3_ARATH) Solyc01g109400.3 368 564 777 574 666 603 635 497 492 426 510 473 710 553 567 Quinone reductase family protein (AHRD V3.3 *** A0A1Y1I2Y2_KLENI) AT4G36750 Solyc01g109410.4 4776 5272 4076 3720 4024 3376 3150 4803 4148 5764 2890 4236 7135 5004 3680 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (AHRD V3.3 *** A0A2G2WA56_CAPBA) AT5G66680 Solyc01g109420.3 218 107 70 47 18 13 20 8 24 60 104 18 138 81 107 Quinone reductase family protein (AHRD V3.3 *** A0A1P8B767_ARATH) AT4G36750 Solyc01g109430.3 133 457 715 697 1260 1366 1345 1102 479 462 755 694 410 516 411 PPPDE putative thiol peptidase family protein (AHRD V3.3 *** Q8RXP3_ARATH) Solyc01g109440.2 3 2 1 11 12 13 8 5 4 4 11 15 3 1 14 Unknown protein Solyc01g109450.3 265 362 432 364 374 451 488 378 315 284 327 335 297 308 314 Pseudouridine kinase (AHRD V3.3 *** A0A1J3EB77_NOCCA) AT1G49350 Solyc01g109460.3 5615 3125 2226 1776 800 752 588 919 2499 4653 3417 1970 1804 2125 2103 Polyol monosaccharide transporter 4 AT3G18830 Solyc01g109470.3 82 122 154 396 68 29 39 75 51 81 141 69 124 156 220 BURP domain-containing protein (AHRD V3.3 *** A0A1Q3C0F5_CEPFO) AT1G49320 Solyc01g109490.4 8 6 29 12 6 14 18 8 8 8 16 13 14 23 12 Unknown protein Solyc01g109500.4 229 470 438 2488 140 227 111 238 1797 695 1950 1134 2886 1013 3378 BURP domain-containing protein (AHRD V3.3 *-* A0A1Q3C0F5_CEPFO) Solyc01g150171.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g109510.3 5023 3673 2901 2185 2626 2398 2330 2802 3709 2836 2555 3189 2956 3037 2842 SWI/SNF complex subunit SWI3D (AHRD V3.3 *** A0A2I4FZ45_9ROSI) AT4G34430 Solyc01g109520.3 1859 1524 1482 1375 1330 1440 1417 1289 1231 1398 1495 1194 1555 1331 1626 Ras-related protein (AHRD V3.3 *** A0A2U1NEY8_ARTAN) AT3G18820 Solyc01g109530.3 0 3 14 4 0 1 0 0 0 0 0 0 0 0 0 Proline-rich receptor-like protein kinase PERK7 (AHRD V3.3 *** A0A2G2WA26_CAPBA) AT3G18810 Solyc01g109540.4 1470 3619 2379 2724 3432 3205 3192 4114 3409 2773 1905 2777 3771 3399 2589 Coatomer subunit gamma (AHRD V3.3 *** A0A1Q3D0F6_CEPFO) AT4G34450 Solyc01g109550.2 42 86 94 133 167 163 167 162 65 79 68 83 54 55 86 Transcription termination factor family protein (AHRD V3.3 *** A0A2K3NNA4_TRIPR) AT3G18870 Solyc01g109560.3 1776 1686 2023 1861 1982 2125 2180 1776 1312 1864 1910 1559 2015 1800 1667 Guanine nucleotide-binding protein subunit beta (AHRD V3.3 *** A0A2G3BVT8_CAPCH) AT4G34460 Solyc01g109570.4 1754 1516 1751 1228 1190 953 920 1094 1532 2874 2406 982 2165 1023 943 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** J9Z4Z2_ELAGV) AT4G34480 Solyc01g109580.4 57 377 219 374 566 542 517 545 354 262 210 421 239 304 176 Adenylyl cyclase-associated protein (AHRD V3.3 *** A0A2G3BVT0_CAPCH) AT4G34490 Solyc01g109590.3 298 590 1027 995 932 976 985 1014 845 771 970 958 538 681 1142 Protein kinase domain (AHRD V3.3 *** A0A200Q940_9MAGN) AT4G34500 Solyc01g109600.4 7489 996 1266 1195 861 953 899 782 847 1954 1706 1011 818 827 1555 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A2I0VL56_9ASPA) Solyc01g109610.4 258 83 190 189 44 47 54 36 64 125 78 145 25 152 85 Erythronate-4-phosphate dehydrogenase family protein (AHRD V3.3 *** Q8VYC6_ARATH) Solyc01g109615.1 1 0 0 1 4 0 0 0 2 1 0 1 0 0 0 Unknown protein Solyc01g109620.3 1057 1508 1729 1631 1832 2084 1964 1683 1564 1408 1503 1486 1679 1721 1606 NADH-quinone oxidoreductase subunit I (AHRD V3.3 *** A0A2W4F7J2_9RHIZ) AT1G79010 Solyc01g109630.4 508 324 455 564 405 407 521 439 403 586 375 535 217 366 305 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** A0A1P8AXV9_ARATH) AT2G21710 Solyc01g109640.3 140 230 216 221 245 225 259 190 206 203 258 215 192 218 138 AP complex subunit sigma (AHRD V3.3 *** A0A2G3BVV9_CAPCH) Solyc01g109650.3 246 477 577 558 562 684 643 614 539 368 610 445 335 396 438 Protein kinase domain (AHRD V3.3 *** A0A200Q977_9MAGN) AT2G16250 Solyc01g109660.2 8088 13115 11496 11116 12442 14168 12729 13631 14245 9377 9726 11310 12764 14367 9956 meloidogyne-induced giant cell protein DB275 AT2G21660 Solyc01g109670.3 0 6 35 151 47 24 15 10 4 17 1 9 2 15 25 Transcription factor RADIALIS (AHRD V3.3 *-* A0A2I0VXE6_9ASPA) Solyc01g109680.3 152 144 128 200 72 81 63 50 145 182 159 86 201 189 271 hypothetical protein (AHRD V3.3 *** AT4G39235.2) AT4G39235 Solyc01g109690.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Protein RADIALIS-like 6 (AHRD V3.3 *** A0A2G2XX78_CAPAN) Solyc01g109700.3 416 593 748 616 716 695 870 796 691 475 577 422 701 520 579 bHLH transcription factor 010 AT4G34530 Solyc01g109710.3 337 259 416 200 102 85 90 84 229 448 524 254 284 299 287 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** Q9SIJ8_ARATH) AT2G21620 Solyc01g109720.3 55 32 17 16 7 6 0 3 16 67 45 6 56 25 26 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9ASW5_ARATH) Solyc01g109730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein KTI12-like protein (AHRD V3.3 *** A0A2G2WA44_CAPBA) Solyc01g109740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A200Q992_9MAGN) AT2G21610 Solyc01g109750.2 18 142 120 215 312 304 247 291 204 95 186 184 20 76 157 syntaxin-112-like (AHRD V3.3 *** A0A2I4HRN6_9ROSI) Solyc01g109760.3 272 172 293 171 168 170 179 161 162 187 143 117 184 212 174 Major facilitator superfamily (AHRD V3.3 *-* A0A2U1KPS1_ARTAN) Solyc01g109770.3 1254 1572 1448 1574 1677 1587 1673 1732 1301 1852 1427 1594 1608 1488 1331 Protein RER1 (AHRD V3.3 *** A0A2G2XNN4_CAPBA) AT2G21600 Solyc01g109780.3 1327 866 515 688 736 721 696 781 989 996 828 693 743 539 583 F-box family protein (AHRD V3.3 *-* AT2G16365.6) Solyc01g109790.3 1887 2801 2109 3373 1764 1616 1503 1805 2802 2058 1000 2456 5576 4234 3453 ADP-glucose pyrophosphorylase large subunit 1 AT4G39210 Solyc01g109800.2 1033 263 174 159 15 13 10 10 167 326 212 33 106 222 590 DUF4408 domain-containing protein (AHRD V3.3 *-* A0A1Q3AR87_CEPFO) AT2G21560 Solyc01g109810.2 958 211 103 232 20 6 4 2 99 151 149 46 286 453 1264 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit (AHRD V3.3 *** Q9FJZ5_ARATH) AT4G34560 Solyc01g109820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 RING/U-box superfamily protein (AHRD V3.3 *-* Q9M0W0_ARATH) Solyc01g109830.3 946 1422 1275 1552 2003 1881 1612 2325 1470 1596 975 2105 1792 2146 1282 Bifunctional dihydrofolate reductase-thymidylate synthase (AHRD V3.3 *** A0A2G3BW20_CAPCH) AT2G16370 Solyc01g109850.3 1569 2511 2139 1951 2777 2605 2443 3342 2331 2526 1777 2511 2963 2667 1866 Diaminopimelate decarboxylase (AHRD V3.3 *** B6T3H3_MAIZE) AT3G14390 Solyc01g109860.3 8 6 12 15 3 1 1 1 4 4 8 5 3 1 3 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1QM07_ARTAN) AT4G36490 Solyc01g109870.3 4920 3055 2810 3209 2123 1854 1838 2159 3453 4744 3705 2894 2870 2729 6052 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1MGM1_ARTAN) AT2G21520 Solyc01g109880.3 1232 1432 2039 2093 1438 1491 1708 796 1777 729 2438 1263 2690 2591 3972 BZIP transcription factor (AHRD V3.3 *** Q8GTZ1_CAPCH) Solyc01g109890.3 261 347 544 350 363 272 241 339 481 314 255 354 466 414 285 Chaperone protein dnaJ 10 (AHRD V3.3 *** A0A2G3BVX6_CAPCH) AT4G39150 Solyc01g109895.1 306 126 82 114 1 1 1 0 17 44 8 2 46 70 215 aspartate carbamoyltransferase (AHRD V3.3 *-* AT2G16385.1) AT2G16385 Solyc01g109910.4 1560 1347 1353 1643 1500 1529 1482 1444 1030 1443 1588 1297 1338 1263 1260 RING/U-box superfamily protein (AHRD V3.3 *** Q8L7K7_ARATH) AT4G39140 Solyc01g109930.4 216 389 387 431 551 533 591 782 547 497 299 718 439 439 214 Inositol-1-monophosphatase (AHRD V3.3 *** B6SMK8_MAIZE) AT4G39120 Solyc01g109940.3 2520 3074 2345 2224 2976 2663 2713 3387 3249 2632 2124 2751 3402 2902 2360 26S proteasome regulatory subunit (AHRD V3.3 *** A8IR41_CHLRE) AT1G45000 Solyc01g109950.4 0 10 12 0 10 7 7 3 2 0 0 3 0 0 5 Kinase family protein (AHRD V3.3 *** D7MUJ9_ARALL) AT4G39110 Solyc01g109960.3 897 1196 875 876 962 1050 1041 1147 980 849 775 948 1144 1225 693 SUMO-activating enzyme subunit 2 (AHRD V3.3 *** A0A2G2XNL5_CAPBA) AT2G21470 Solyc01g109970.3 2004 1118 1098 860 932 1072 958 1006 1145 1552 1216 1226 1021 1014 1146 SNF2 domain-containing protein / helicase domain-containing protein (AHRD V3.3 *** A0A178VR01_ARATH) AT2G16390 Solyc01g109980.4 597 454 441 502 670 617 646 578 725 597 849 493 519 559 770 BEL1-like homeodomain protein 7 (AHRD V3.3 *** A0A2G3BW58_CAPCH) AT4G34610 Solyc01g109990.4 1519 1530 1247 1008 894 948 962 1126 1220 827 1150 1150 1601 1765 1567 RNA-binding protein 28 (AHRD V3.3 *** A0A1J3F968_NOCCA) Solyc01g110000.3 309 478 781 579 439 408 484 532 881 998 1002 651 405 646 964 Beta-galactosidase (AHRD V3.3 *** A0A2G3BW46_CAPCH) Solyc01g110010.3 196 216 201 240 211 270 182 251 162 182 188 226 217 227 171 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G3BW53_CAPCH) AT1G74600 Solyc01g110020.4 1593 877 973 944 910 967 893 734 981 1111 1124 1025 999 922 1015 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (AHRD V3.3 *** A0A2U1QMN7_ARTAN) Solyc01g110030.3 643 580 573 570 477 591 609 505 461 467 701 423 655 574 617 WD40 repeat (AHRD V3.3 *** A0A200QE38_9MAGN) AT2G16405 Solyc01g110050.1 0 0 0 0 0 4 3 5 3 4 9 1 0 2 0 Purple acid phosphatase (AHRD V3.3 *** Q6J5M9_SOLTU) AT2G16430 Solyc01g110060.3 198 726 427 439 657 566 599 611 615 507 476 407 651 454 397 Purple acid phosphatase (AHRD V3.3 *** A0A0C5AJS1_SOLLC) AT2G16430 Solyc01g110070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc01g110080.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3AH05_CAPAN) Solyc01g110090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3AGY9_CAPAN) Solyc01g110100.4 126 95 166 116 74 112 68 83 124 147 202 115 129 110 106 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2XNK4_CAPBA) Solyc01g110110.3 161 163 257 241 307 226 235 288 207 221 278 194 279 239 168 Cysteine protease (AHRD V3.3 *** Q9AUC5_IPOBA) AT4G39090 Solyc01g110120.3 2407 3817 3057 3481 3250 3154 3190 3796 4936 3770 3379 3759 3145 3482 3898 V-type proton ATPase subunit a (AHRD V3.3 *** A0A2G2XNJ6_CAPBA) AT4G39080 Solyc01g110130.3 1148 5343 4080 3553 6831 6176 6097 7813 5319 3677 2989 5862 4079 5588 1556 DNA helicase (AHRD V3.3 *** A0A2G3BW33_CAPCH) AT2G16440 Solyc01g110140.4 85 115 109 319 256 341 367 309 302 183 487 283 120 117 53 Unknown protein Solyc01g110150.2 261 205 186 217 170 181 182 188 239 253 187 220 360 169 222 Prostatic spermine-binding-like protein (AHRD V3.3 *-* O65687_ARATH) AT4G34630 Solyc01g110160.4 121 187 276 176 261 272 320 235 210 111 156 201 98 179 176 hypothetical protein (AHRD V3.3 *** AT2G21385.5) AT2G21385 Solyc01g110170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein KTI12-like protein (AHRD V3.3 *-* A0A2G2WA44_CAPBA) Solyc01g110180.4 1 3 9 18 18 7 16 10 6 18 13 14 20 5 4 Zinc finger, B-box (AHRD V3.3 *** A0A2U1KI66_ARTAN) AT4G39070 Solyc01g110190.4 380 513 568 573 638 691 694 670 610 514 452 695 395 521 468 Kinesin-related protein (AHRD V3.3 *** D3YBF5_TRIRP) AT4G39050 Solyc01g110200.2 0 0 0 0 7 1 3 4 2 4 1 5 0 0 0 Protein Mei2 (AHRD V3.3 *-* A0A0U9HRM8_KLENI) AT5G07930 Solyc01g110210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Mei2 (AHRD V3.3 *-* A0A0U9HRM8_KLENI) AT5G07930 Solyc01g110220.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Protein Mei2 (AHRD V3.3 *-* A0A0U9HRM8_KLENI) Solyc01g110230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Mei2 (AHRD V3.3 *-* A0A0U9HRM8_KLENI) AT5G07930 Solyc01g110240.1 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 Protein Mei2 (AHRD V3.3 *-* A0A0U9HRM8_KLENI) AT5G07930 Solyc01g110250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g110260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Mei2 (AHRD V3.3 *-* A0A0U9HRM8_KLENI) AT5G07930 Solyc01g110270.3 317 835 890 880 982 947 928 824 691 547 558 825 563 812 491 RNA-binding CRS1 / YhbY (CRM) domain protein (AHRD V3.3 *-* F4JV86_ARATH) AT4G39040 Solyc01g110280.3 199 389 328 342 411 405 454 380 390 246 465 358 364 397 337 Protein DETOXIFICATION (AHRD V3.3 *** A0A1J3G5W8_NOCCA) AT2G21340 Solyc01g110290.3 750 2473 1425 1809 2710 2285 2460 2411 2695 3059 3563 3236 2235 2151 1419 Squalene synthase (AHRD V3.3 *** Q9XJ31_SOLTU),Pfam:PF00494 AT4G34640 Solyc01g110300.4 1025 949 757 812 914 785 771 865 986 1070 843 886 1036 988 981 SH3 domain-containing protein (AHRD V3.3 *** A0A2U1NRE5_ARTAN) AT4G34660 Solyc01g110310.3 1784 1650 1495 1597 1533 1707 1577 1397 1449 1318 2105 1697 1632 1597 1804 GATA transcription factor (AHRD V3.3 *** K4B3P4_SOLLC) Solyc01g110320.4 0 1 0 1 0 0 2 0 1 2 0 0 0 0 13 Coiled-coil domain-containing protein 90B, mitochondrial (AHRD V3.3 *** A0A1J3GXX3_NOCCA) AT2G16460 Solyc01g110330.3 0 1 0 2 0 2 1 4 0 4 0 1 0 0 0 protein CHROMOSOME TRANSMISSION FIDELITY 7 (AHRD V3.3 *** A0A2I4GQF6_9ROSI) AT4G31400 Solyc01g110340.4 431 1196 452 1860 2148 1800 1503 2199 1918 2284 734 1266 1217 1178 807 Endoglucanase (AHRD V3.3 *** A0A218XGM2_PUNGR) AT4G39010 Solyc01g110350.2 109 148 167 163 126 159 171 143 118 97 110 136 125 139 126 hypothetical protein (AHRD V3.3 *** AT4G38980.1) AT4G38980 Solyc01g110360.3 5508 8559 4532 7968 7200 7404 6490 7517 6789 5481 4875 3913 3841 2705 10414 Fructose-bisphosphate aldolase (AHRD V3.3 *** Q9SXX5_NICPA) AT4G38970 Solyc01g110370.4 459 442 149 474 599 540 551 526 276 371 159 210 369 123 85 Zinc finger, B-box (AHRD V3.3 *** A0A2U1LAI4_ARTAN) AT4G38960 Solyc01g110380.3 1402 2138 1949 2047 2981 2828 3088 2805 1890 1896 1753 2002 2048 2409 2189 Kinesin-like protein (AHRD V3.3 *** A0A2G2XNI5_CAPBA) AT2G21300 Solyc01g110390.2 991 1361 1917 1631 1826 1932 1858 1499 1417 1114 1600 1333 1661 1438 1584 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (AHRD V3.3 *** A0A1U8E7N6_CAPAN) AT4G34700 Solyc01g110400.2 476 624 701 611 821 725 789 609 545 534 584 529 733 723 503 30S ribosomal protein S31, mitochondrial (AHRD V3.3 *** A0A1U8E943_CAPAN) AT2G21290 Solyc01g110410.3 2074 1887 1936 1816 1824 1929 1762 1827 1933 1873 1543 1722 2116 1836 1837 Ubiquitin fusion degradation protein (AHRD V3.3 *** B3TLZ5_ELAGV) AT2G21270 Solyc01g110440.5.1 2781 7340 15817 9696 13443 16808 16464 12208 14760 17985 16126 18796 6076 9039 8139 arginine decarboxylase AT4G34710 Solyc01g110430.3 2 2 3 13 3 10 8 15 3 3 0 7 0 2 0 Unknown protein Solyc01g110450.3 1704 2268 2420 2038 1619 1706 1778 1729 1783 1417 1772 1584 3191 2814 2836 NAD(P)-linked oxidoreductase superfamily protein (AHRD V3.3 *** A0A2U1PJ17_ARTAN) AT2G21250 Solyc01g110460.4 414 346 568 587 571 631 633 504 341 482 402 408 486 499 483 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (AHRD V3.3 *** A0A2U1L3J9_ARTAN) AT2G16530 Solyc01g110470.3 591 391 396 299 215 236 219 189 295 358 377 328 327 359 384 GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN98_SOLTU) AT2G21240 Solyc01g110480.4 3512 2692 4675 3261 2671 2645 2734 2396 3534 3155 4512 3265 2819 2979 3445 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** A0A2U1P1T7_ARTAN) AT4G38900 Solyc01g110490.4 2147 2325 1554 1691 1765 1831 1943 2196 1766 1626 1458 1881 2204 2413 1349 Zinc finger transcription factor 15 AT4G38890 Solyc01g110500.3 3 2 0 2 0 2 0 1 1 0 13 0 0 5 0 ENTH/VHS-like protein (AHRD V3.3 *** A0A2U1MPP6_ARTAN) Solyc01g110510.3 0 2 9 1 5 7 0 6 4 3 3 5 11 2 5 ENTH/VHS-like protein (AHRD V3.3 *** A0A2U1MPP6_ARTAN) Solyc01g110520.3 2120 3127 2060 3736 3444 3443 3101 3528 1731 2870 1692 2557 2659 2568 1337 Amidophosphoribosyltransferase (AHRD V3.3 *** A0A2G3BW41_CAPCH) AT4G34740 Solyc01g110530.3 540 878 862 662 1171 1057 1162 1040 918 890 869 706 990 679 589 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A1U8DXV8_CAPAN) AT2G18040 Solyc01g110540.3 1473 3176 5464 4460 4590 4774 4784 2957 2272 1895 4713 2677 3819 4295 4896 ATP synthase E chain (AHRD V3.3 *** Q8GXE7_ARATH) AT3G01130 Solyc01g110550.3 311 266 283 231 350 320 330 339 291 215 228 254 232 239 168 Ribosome-binding factor A (AHRD V3.3 *** A0A200QQX5_9MAGN) AT4G34730 Solyc01g110555.1 24 40 62 56 39 59 46 30 31 27 64 52 43 30 38 Auxin responsive SAUR protein (AHRD V3.3 *** A0A2U1P3N8_ARTAN) Solyc01g110570.3 19 85 56 163 348 384 291 349 121 46 114 162 31 132 22 Small auxin up-regulated RNA4 AT4G34760 Solyc01g110580.2 52 77 98 112 406 353 379 273 67 60 47 76 109 118 48 Small auxin up-regulated RNA5 Solyc01g110590.4 0 8 12 12 0 3 7 0 1 2 2 0 4 3 0 Small auxin up-regulated RNA6 AT4G34760 Solyc01g110600.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g110610.4 0 2 0 1 0 0 0 0 2 1 1 0 0 11 0 SAUR-like auxin-responsive protein family (AHRD V3.3 *** A0A2U1L7D7_ARTAN) AT4G34760 Solyc01g110620.1 0 0 0 0 3 1 0 0 0 0 0 3 0 0 0 Small auxin up-regulated RNA8 AT4G34760 Solyc01g110630.4 0 2 1 5 5 21 13 4 1 1 1 0 0 3 0 Small auxin up-regulated RNA9 AT4G38840 Solyc01g110640.2 120 58 48 39 16 30 16 12 26 25 41 11 34 46 96 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G3A9Q9_CAPAN) Solyc01g150172.1 152 68 67 86 26 35 14 26 51 29 79 53 55 55 90 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc01g110647.1 1 5 3 11 12 14 12 9 17 1 0 4 0 6 0 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XY34_CAPAN) Solyc01g110660.4 71 63 38 51 22 60 54 63 24 29 46 30 15 38 20 Auxin-responsive protein SAUR21 (AHRD V3.3 *** A0A2G2XNG0_CAPBA) AT2G21210 Solyc01g110670.3 173 149 143 182 137 165 188 109 111 49 41 71 43 71 168 Auxin-responsive protein SAUR21 (AHRD V3.3 *** A0A2G3BWF1_CAPCH) AT2G21210 Solyc01g110680.4 20 17 26 30 19 40 38 11 15 7 17 21 7 12 4 Small auxin up-regulated RNA12 AT4G38840 Solyc01g150173.1 27 15 9 21 6 6 6 2 9 5 17 8 5 7 43 Unknown protein Solyc01g150174.1 79 29 45 43 30 36 30 20 35 22 28 47 33 38 35 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G3A9Q9_CAPAN) Solyc01g110686.1 68 29 11 14 6 0 1 5 22 10 10 22 21 14 5 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc01g150175.1 33 11 2 26 4 4 7 7 9 14 3 13 12 23 12 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc01g110710.3 3 17 9 40 24 26 47 23 21 4 14 14 1 5 0 Small auxin up-regulated RNA10 AT4G38840 Solyc01g110720.2 15 39 30 55 43 80 115 45 35 25 28 15 8 9 10 Auxin-responsive protein SAUR21 (AHRD V3.3 *** A0A2G3BWF1_CAPCH) AT4G38840 Solyc01g110730.4 12 22 16 27 21 30 39 14 20 5 0 5 6 14 3 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XY34_CAPAN) AT4G38840 Solyc01g110770.2 0 9 2 19 13 7 12 5 21 3 27 0 0 2 0 Small auxin up-regulated RNA11 AT2G21210 Solyc01g110780.1 0 15 0 9 6 5 22 13 6 3 18 1 1 5 0 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XY34_CAPAN) AT4G38840 Solyc01g110790.3 0 11 7 7 0 11 12 0 11 0 1 3 0 2 8 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XY34_CAPAN) AT4G38840 Solyc01g110800.3 0 2 0 0 0 1 0 1 2 0 6 0 0 5 5 Small auxin up-regulated RNA19 AT4G38840 Solyc01g110810.3 129 117 177 193 137 153 163 78 88 82 244 85 75 129 137 Unknown protein Solyc01g110820.4 668 565 403 483 468 407 500 505 463 538 391 552 489 557 355 U11/U12 small nuclear ribonucleoprotein 65 kDa protein (AHRD V3.3 *** A0A1J3HYT0_NOCCA) AT1G09230 Solyc01g110825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR21 (AHRD V3.3 *** A0A2G2XY95_CAPAN) AT2G21210 Solyc01g110840.3 16 16 4 17 5 1 4 8 6 4 17 1 24 9 15 Unknown protein Solyc01g110860.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR21 (AHRD V3.3 *** A0A2G2XY50_CAPAN) AT2G21210 Solyc01g110870.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR21 (AHRD V3.3 *** A0A2G2XY50_CAPAN) AT2G21210 Solyc01g110880.1 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR21 (AHRD V3.3 *** A0A2G2XY50_CAPAN) AT2G21210 Solyc01g110890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR21 (AHRD V3.3 *** A0A2G2XY24_CAPAN) Solyc01g110900.1 0 3 1 3 1 9 3 1 17 2 21 7 3 7 0 SAUR-like auxin-responsive protein family (AHRD V3.3 *** Q9SW57_ARATH) AT4G34770 Solyc01g110903.1 0 1 0 2 20 5 4 2 0 0 0 1 0 0 0 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XY34_CAPAN) AT4G38840 Solyc01g110907.1 22 13 31 27 7 0 6 4 9 13 69 0 7 1 17 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XY34_CAPAN) AT4G38840 Solyc01g110920.4 102 75 124 76 37 55 76 38 60 57 65 25 52 21 225 Small auxin up-regulated RNA26 Solyc01g110930.1 1 15 6 7 18 8 6 5 4 0 2 0 12 8 13 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XXZ7_CAPAN) AT4G38840 Solyc01g110940.3 18 15 9 54 9 13 15 12 11 13 4 8 2 1 1 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XY34_CAPAN) AT4G38840 Solyc01g110950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DWNN domain, a CCHC-type zinc finger (AHRD V3.3 *-* A0A1P8BBL5_ARATH) Solyc01g110960.4 658 1798 1519 1018 2050 2197 1817 2041 1508 643 1062 1404 1378 1739 962 Prefoldin chaperone subunit family protein (AHRD V3.3 *** A0A2U1NI64_ARTAN) AT5G27330 Solyc01g110970.3 31 34 73 59 61 59 66 51 19 23 30 35 22 17 8 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XYI3_CAPAN) Solyc01g110980.4 0 1 0 4 0 0 1 0 3 3 4 0 0 1 3 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XY34_CAPAN) Solyc01g110990.2 2495 1554 1490 1131 902 889 889 885 1387 1478 1301 1133 1309 1335 1355 RNA helicase DEAH-box6 AT3G26560 Solyc01g111000.4 7 6 22 13 7 11 15 10 7 3 3 0 4 9 1 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G2XY34_CAPAN) AT2G21210 Solyc01g111010.4 16 17 36 28 3 17 7 4 13 11 50 8 11 5 13 X-intrinsic protein 1.6 Solyc01g111020.3 1638 1683 1822 1571 1531 1687 1720 1642 2060 1451 1898 1829 1183 1935 2233 Pentatricopeptide repeat-containing protein MRL1, chloroplastic (AHRD V3.3 *** A0A2G2W9F4_CAPBA) AT4G34830 Solyc01g111030.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosome biogenesis protein WDR12 homolog (AHRD V3.3 *** A0A2G3D985_CAPCH) AT5G15550 Solyc01g111040.4 788 399 413 453 141 223 163 192 328 463 605 288 352 386 842 Calcium-binding EF-hand family protein (AHRD V3.3 *** A0A2U1MN65_ARTAN) AT4G38810 Solyc01g111050.4 6 0 1 0 0 4 2 0 1 0 2 0 6 0 2 COBRA-like protein (AHRD V3.3 *** K4B3W8_SOLLC) Solyc01g111060.4 2104 2031 2342 2213 2523 2802 2509 2199 2061 1848 2031 2090 2575 2364 2420 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 (AHRD V3.3 *** A0A2G3BWG6_CAPCH) AT4G38800 Solyc01g111070.3 2 6 0 0 1 11 5 3 0 0 5 0 0 1 3 Chalcone synthase-like protein (AHRD V3.3 *** A0A2K3NPT9_TRIPR) AT4G34850 Solyc01g150176.1 412 227 182 116 2 7 3 4 38 54 125 14 84 200 126 Gibberellin regulated protein (AHRD V3.3 *** A0A200Q364_9MAGN) AT1G75750 Solyc01g111090.3 873 1058 770 812 896 873 827 972 900 1004 632 919 1110 921 610 Er lumen protein retaining receptor-like protein (AHRD V3.3 *** A0A2K3NRD2_TRIPR) AT4G38790 Solyc01g111100.5 75 897 799 804 566 570 648 630 1217 454 571 580 780 746 357 Neutral/alkaline invertase (AHRD V3.3 *** I0CL53_MANES) AT4G34860 Solyc01g111110.3 562 280 312 320 170 187 154 147 191 359 268 237 191 186 251 transmembrane protein (AHRD V3.3 *** AT2G21180.1) AT2G21180 Solyc01g111120.4 1160 1391 1410 1227 1096 1036 1083 1136 1491 1203 1231 1351 1500 1543 2093 Triosephosphate isomerase (AHRD V3.3 *** A0A200Q3A8_9MAGN) AT2G21170 Solyc01g111130.4 992 634 627 851 556 660 717 536 556 681 720 565 606 628 900 bHLH transcription factor 011 AT3G19860 Solyc01g111140.3 531 493 512 424 482 533 538 491 582 383 489 535 510 557 595 Protein XAP5 CIRCADIAN TIMEKEEPER (AHRD V3.3 *** A0A2G2Y2K1_CAPAN) AT2G21150 Solyc01g111150.2 1301 1765 1577 1386 1463 1487 1453 1379 1488 1565 1369 1272 3457 2235 2041 Translocon-associated protein subunit alpha (AHRD V3.3 *** A0A1U8F1N5_CAPAN) AT2G21160 Solyc01g111160.3 11 5 2 14 1 2 1 2 5 10 3 3 6 2 6 Unknown protein Solyc01g111170.3 28023 35322 38866 39848 29996 30995 32764 34164 34964 28277 27872 33579 48817 42706 37943 cyclophilin AT2G16600 Solyc01g111190.4 339 210 183 293 213 239 265 220 219 245 226 244 235 198 395 magnesium transporter NIPA (DUF803) (AHRD V3.3 *-* AT4G13800.8) Solyc01g111200.3 1138 2177 1161 1015 1378 1303 1302 1563 1505 962 982 1172 2143 1781 1262 eukaryotic translation initiation factor 4B3 (AHRD V3.3 *** A0A2I4EWR0_9ROSI) AT4G38710 Solyc01g111210.3 266 631 764 1043 885 941 863 981 840 601 753 877 503 619 769 Amidase (AHRD V3.3 *-* A0A200RAW3_9MAGN) AT4G34880 Solyc01g111220.3 10 9 45 21 39 43 44 35 7 14 37 14 16 14 13 Amidase (AHRD V3.3 *** A0A200RAW3_9MAGN) AT4G34880 Solyc01g111230.3 0 0 0 5 0 0 0 1 2 0 0 1 11 1 17 Dirigent protein (AHRD V3.3 *** K4B3Y5_SOLLC) AT2G21100 Solyc01g111240.4 9818 7240 5527 4678 5208 5415 5083 5529 7240 7579 5379 6851 4618 6722 6170 Translocase of chloroplast, chloroplastic (AHRD V3.3 *** A0A2G2W9J0_CAPBA) AT3G16620 Solyc01g111250.3 1 1 5 0 0 0 0 0 5 9 10 2 1 8 19 1-phosphatidylinositol phosphodiesterase (AHRD V3.3 *** A0A1J3JKG9_NOCCA) AT4G38690 Solyc01g111260.2 538 343 391 347 58 78 60 62 424 454 526 253 491 332 739 1-phosphatidylinositol phosphodiesterase (AHRD V3.3 *** A0A1J3JKG9_NOCCA) AT4G38690 Solyc01g111270.3 2 7 0 18 0 0 0 2 1 1 0 0 0 5 0 Armadillo repeat only 1 (AHRD V3.3 *** Q9SW41_ARATH) Solyc01g111280.3 11 23 28 40 12 17 12 16 10 6 20 14 25 23 25 Cold-shock protein (AHRD V3.3 *-* A0A200RAC1_9MAGN) Solyc01g111290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g111300.4 2648 5407 6346 4482 5634 5192 3926 6053 4800 3601 3698 6117 6586 5906 4298 Cold-shock protein (AHRD V3.3 *-* A0A200RAC1_9MAGN) AT4G38680 Solyc01g111310.3 923 2074 3535 3976 2432 2665 2341 2171 3151 1613 2217 3398 1721 3755 2768 SlLAX2 AT2G21050 Solyc01g111320.3 1182 765 916 961 721 817 734 645 747 998 977 814 816 885 1080 Thaumatin-like protein 1 (AHRD V3.3 *** A0A1U8E7X2_CAPAN) AT4G38670 Solyc01g111330.4 649 2717 2038 2348 5029 4322 4258 5839 3177 2359 2291 4300 2045 2173 994 Thaumatin-like protein 1 (AHRD V3.3 *** A0A2G3BWI2_CAPCH) AT4G38660 Solyc01g111340.4 15 230 221 215 680 740 719 666 272 66 156 191 34 175 74 Endo-1,4-beta-xylanase (AHRD V3.3 *** A0A1J3CP06_NOCCA) AT4G38650 Solyc01g111350.3 1155 1564 2696 3116 553 458 539 549 5472 2408 5159 2707 4399 4456 2632 Major facilitator superfamily protein (AHRD V3.3 *** Q9SW40_ARATH) AT4G34950 Solyc01g111360.3 289 667 788 888 864 951 899 809 802 483 888 802 795 1020 694 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A1U8DY34_CAPAN) AT4G34960 Solyc01g111370.3 470 594 510 771 555 494 607 795 617 1006 531 634 524 520 433 Choline transporter-like protein (AHRD V3.3 *** A0A2U1NLL4_ARTAN) AT4G38640 Solyc01g111380.3 449 391 298 519 371 302 273 251 496 439 270 185 659 370 644 Actin-depolymerizing factor-like protein (AHRD V3.3 *** A0A2K3P088_TRIPR) AT2G16700 Solyc01g111400.4 2881 3161 1773 2211 3225 2794 2446 3643 3137 3447 1646 3069 2761 2242 1814 Subtilisin-like protease-like protein (AHRD V3.3 *** A0A2K3P1W8_TRIPR) AT4G34980 Solyc01g111410.3 421 319 366 342 383 413 363 375 378 393 238 323 269 341 349 Protein prenyltransferase alpha subunit repeat-containing protein 1 (AHRD V3.3 *** A0A1J3ITR8_NOCCA) AT1G10095 Solyc01g111420.3 2653 3185 1669 1706 1294 1109 1076 1404 1356 1475 1365 1691 3209 3018 1905 Ribosomal protein L1 (AHRD V3.3 *** A0A200R8A3_9MAGN) AT3G58660 Solyc01g111430.2 13 15 18 25 68 22 26 36 32 30 21 26 30 22 27 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RA79_9MAGN) Solyc01g111450.3 2136 3728 3083 2934 4803 4247 4058 4759 3623 2837 2891 3742 4642 3758 2692 LEY14339 proteasome, alpha subunit AT5G66140 Solyc01g150177.1 26 36 43 45 25 44 52 21 31 25 68 38 31 46 52 Unknown protein Solyc01g111460.3 97 35 98 68 25 50 79 42 50 55 50 51 48 56 48 Proteasome subunit alpha type (AHRD V3.3 *-* A0A1U8E7Y7_CAPAN) Solyc01g111470.4 200 151 119 195 131 153 178 207 171 282 80 184 99 146 76 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q7R3_9MAGN) AT2G16880 Solyc01g111480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc01g111500.3 61 85 57 96 101 89 90 56 142 75 145 142 137 93 219 R2R3MYB transcription factor 7 AT4G38620 Solyc01g111510.3 2451 2305 3308 2659 2426 2344 2587 2253 2716 2406 2996 2465 2569 2318 3395 Ascorbate peroxidase (AHRD V3.3 *** Q8W4V7_CAPAN) AT4G35000 Solyc01g111520.3 1473 1725 1984 1814 1700 1502 1552 1831 2606 2311 1882 2011 2452 2067 1873 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A1P8BD17_ARATH) AT2G20990 Solyc01g111530.3 6083 5633 5190 5073 5099 5146 5460 5427 5372 5716 4869 5218 4747 5171 5097 E3 ubiquitin-protein ligase UPL3 (AHRD V3.3 *** A0A1U8E9F6_CAPAN) AT4G38600 Solyc01g111540.4 0 7 50 7 5 6 5 2 1 19 22 4 0 4 1 Beta-galactosidase (AHRD V3.3 *** A0A2G3ATV6_CAPCH) AT2G16730 Solyc01g111550.3 22 362 309 252 433 438 363 441 283 91 221 345 137 305 106 protein MCM10 homolog (AHRD V3.3 *** A0A2I4EWG7_9ROSI) AT2G20980 Solyc01g111560.3 1592 1451 1700 1403 2115 2227 2534 2097 1668 1399 1916 1754 1121 1377 1825 Rac-like GTP binding protein (AHRD V3.3 *** Q9S821_PHYPA) AT4G35020 Solyc01g111570.3 193 614 306 862 332 363 418 218 1304 1506 660 662 1224 713 1059 proline-rich receptor-like protein kinase PERK7 isoform X1 (AHRD V3.3 *** A0A2I4GC47_9ROSI) Solyc01g111580.3 988 1093 931 976 846 886 798 806 966 923 887 751 1142 901 904 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** A0A1Y1IM66_KLENI) AT2G16770 Solyc01g111590.4 125 535 768 577 647 729 690 608 506 359 434 680 456 907 265 WD-40 repeat-containing protein MSI1 (AHRD V3.3 *** A0A2G3AUE9_CAPCH) AT2G16780 Solyc01g111600.3 1779 1659 3243 2796 2600 2428 2560 1985 2307 2130 2774 2101 2711 2388 2930 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6QQA6_ACTCH) AT4G38580 Solyc01g111610.3 420 272 767 501 420 404 368 380 354 700 942 563 405 466 479 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** A0A2U1N6W4_ARTAN) AT4G35070 Solyc01g111620.3 702 1048 688 766 815 735 662 860 830 762 645 757 1535 1176 878 High-affinity nickel-transport family protein (AHRD V3.3 *** F4JM82_ARATH) AT2G16800 Solyc01g111630.3 2919 3326 1736 2394 3930 3518 3509 4202 3429 3456 1571 2786 2726 1757 1864 glycerate dehydrogenase (AHRD V3.3 *** A0A2I4EWU8_9ROSI) AT1G68010 Solyc01g111640.3 434 290 247 205 207 171 188 239 181 178 135 214 584 394 305 SKP1-like protein (AHRD V3.3 *** O82463_NICCL) Solyc01g111650.3 3126 2282 2317 1537 2234 1676 1645 2156 2378 2444 1571 2379 2673 2469 1866 SKP1-like protein (AHRD V3.3 *** O82463_NICCL) AT5G42190 Solyc01g111660.4 937 3926 3953 4532 7439 7576 6621 8083 3390 2546 3411 5337 1067 2172 1459 plasma membrane intrinsic protein 2.8 AT4G35100 Solyc01g111670.4 238 331 360 239 189 192 192 176 271 280 255 203 554 373 240 transmembrane protein%2C putative (DUF1279) (AHRD V3.3 *** AT2G20940.2) AT2G20940 Solyc01g111680.4 345 482 459 397 567 593 577 690 516 391 390 477 482 479 348 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200Q025_9MAGN) AT2G16920 Solyc01g111690.3 269 456 487 403 484 485 536 428 382 328 395 369 390 386 430 trafficking protein particle complex subunit 2-like protein (AHRD V3.3 *** A0A2I4GC85_9ROSI) AT2G20930 Solyc01g111700.2 18 20 31 41 25 37 24 48 49 20 34 21 15 45 39 26S proteasome non-ATPase regulatory subunit 3 (AHRD V3.3 *** B6TAE2_MAIZE) Solyc01g111710.4 5020 5967 6599 6004 6270 7148 6685 5524 5060 5021 5974 5399 6710 6200 6420 26S proteasome non-ATPase regulatory subunit 3 (AHRD V3.3 *** B6TBG8_MAIZE) AT1G20200 Solyc01g111720.4 842 1012 1043 922 921 942 1017 880 883 716 876 781 1282 1197 1058 Translation initiation factor 3 (AHRD V3.3 *-* A0A200PZ35_9MAGN) AT1G34360 Solyc01g111730.3 1759 920 1175 868 986 1170 1001 1002 923 1136 1275 987 901 874 947 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1M4W5_ARTAN) AT4G38520 Solyc01g111740.3 439 821 883 844 1986 1981 1684 2315 1273 1070 1028 1822 577 917 446 DUF632 domain-containing protein/DUF630 domain-containing protein (AHRD V3.3 *** A0A1Q3CAW0_CEPFO) Solyc01g111750.4 496 409 313 279 378 313 304 413 427 673 370 368 446 315 274 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like (AHRD V3.3 *** A0A2I4EWX0_9ROSI) AT2G20920 Solyc01g111760.4 4307 6809 5377 6480 7206 7569 7539 7275 8146 7481 6544 6543 7374 6457 7450 Vacuolar ATP synthase subunit B (AHRD V3.3 *** A0A2P6TTB9_CHLSO) AT4G38510 Solyc01g111770.2 271 565 591 478 711 729 641 736 606 446 353 554 538 561 533 DUF616 domain-containing protein (AHRD V3.3 *** A0A1Q3CAK1_CEPFO) AT4G38500 Solyc01g111780.4 2158 2535 1769 2068 2188 1974 2276 2488 2275 2166 1556 1911 2243 2250 2000 Transportin-1 (AHRD V3.3 *** A0A2G2W9L9_CAPBA) AT2G16950 Solyc01g111790.2 3 4 0 3 0 1 0 0 3 0 0 10 1 0 0 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *** A0A2I4EWF2_9ROSI) Solyc01g111800.4 51 51 107 96 53 42 48 37 82 88 99 106 90 73 70 Polyamine transporter PUT1 (AHRD V3.3 *** A0A2G3AUC9_CAPCH) Solyc01g111810.3 179 191 378 238 184 180 164 169 140 156 239 155 197 262 289 Ribosomal L18p/L5e family protein (AHRD V3.3 *** F4HXR7_ARATH) AT1G08845 Solyc01g111820.2 36 18 54 13 3 9 1 4 4 20 40 5 3 10 1 cell wall integrity and stress response component 2-like (AHRD V3.3 *-* XP_023735371.1) AT3G52520 Solyc01g111825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g111830.3 2700 8437 7637 6912 10955 9956 10418 10437 8086 4810 6915 7421 6459 5516 4172 Methyltransferase (AHRD V3.3 *** O24154_TOBAC) AT1G20330 Solyc01g111840.3 182 386 423 441 586 395 497 543 353 225 282 260 231 214 278 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8BEX6_ARATH) Solyc01g111850.3 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 Protein aspartic protease in guard cell 1 (AHRD V3.3 *** A0A314KGQ2_NICAT) Solyc01g111860.4 498 298 262 310 191 312 269 260 323 296 342 316 311 302 359 WD40 repeat (AHRD V3.3 *** A0A200QEI8_9MAGN) AT4G35140 Solyc01g111870.3 238 307 320 332 460 477 650 466 321 329 337 432 197 431 274 Serine/threonine-protein kinase ATR (AHRD V3.3 *** A0A2G3BW62_CAPCH) AT5G40820 Solyc01g111880.4 45 46 66 15 215 170 182 167 10 41 41 10 39 22 174 MAP kinase kinase kinase 11 Solyc01g111890.3 1482 1028 1108 1230 827 1092 1135 781 790 1033 1111 887 831 930 1361 F-box/LRR-repeat protein 10 (AHRD V3.3 *** A0A2G2W9S0_CAPBA) AT2G17020 Solyc01g111900.4 0 0 2 4 5 4 4 2 3 0 0 6 7 10 1 O-methyltransferase (AHRD V3.3 *** A0A2S1PVB6_CAMAC) AT4G35160 Solyc01g111910.3 3177 1828 1190 1190 755 893 844 909 1220 1500 1115 1133 1286 1580 1363 RNA polymerase II-associated protein 1 (AHRD V3.3 *** A0A200QJZ1_9MAGN) AT4G38440 Solyc01g111920.3 928 983 856 1387 1337 1199 1161 1437 1103 1553 1052 1740 770 916 883 F-box protein SKIP23 (AHRD V3.3 *** A0A2I4EWQ4_9ROSI) AT2G17030 Solyc01g111930.4 1264 1246 1471 1488 1692 1759 1627 1814 1468 1701 1465 1885 1043 1507 1200 Rop guanine nucleotide exchange factor 1 (AHRD V3.3 *** A0A2G2W9R1_CAPBA) AT4G38430 Solyc01g111940.4 669 838 911 756 912 912 836 1060 1155 684 686 926 1014 826 894 Coiled-coil protein (AHRD V3.3 *** Q8VYC9_ARATH) AT1G16210 Solyc01g111950.4 21 176 152 112 158 218 188 185 233 90 206 105 49 86 43 Serine-threonine protein kinase, plant-type, putative (AHRD V3.3 *** B9SR04_RICCO) Solyc01g111960.3 4 27 0 2 8 1 0 4 8 0 18 28 0 9 3 GDSL esterase/lipase At5g55050-like (AHRD V3.3 *** A0A1U7VAQ9_NICSY) Solyc01g111970.4 4 2 2 12 7 11 0 9 12 13 28 4 0 3 2 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A1U8DYA0_CAPAN) Solyc01g111980.3 3182 2047 1760 1206 731 857 711 931 1553 2028 4123 1297 1193 1244 1650 Lysine histidine transporter-like 8 (AHRD V3.3 *** A0A2G2XYM3_CAPAN) Solyc01g111990.3 556 588 529 577 428 570 648 605 750 442 449 566 306 578 819 Alanine--tRNA ligase (AHRD V3.3 *** K3XV85_SETIT) AT5G22800 Solyc01g112000.4 457 325 770 208 112 145 145 103 329 216 1577 217 186 180 608 expansin-like protein precursor 1 AT3G45970 Solyc01g112010.3 159 90 125 99 169 152 160 133 134 86 179 106 152 126 213 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT3G56510.5) AT3G56510 Solyc01g112020.3 1110 1569 1634 1341 1341 1668 1841 1454 1228 972 1137 1325 1751 1981 1692 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RCW9_9MAGN) AT4G35850 Solyc01g112025.1 601 547 589 563 636 607 570 592 527 629 455 561 425 562 346 Intron maturase, type II family protein (AHRD V3.3 *** A0A2U1N325_ARTAN) AT1G30010 Solyc01g112050.3 2251 1343 1301 1450 1062 1038 1125 1038 1260 1904 1370 1040 1407 1384 1171 DUF630 family protein, putative (DUF630 and DUF632) (AHRD V3.3 *-* Q9XI02_ARATH) AT4G35240 Solyc01g112040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc01g112060.4 608 768 606 772 943 832 1021 1025 1032 977 643 906 542 528 475 NAD(P)-binding domain-containing protein (AHRD V3.3 *** A0A2U1M2T6_ARTAN) AT4G35250 Solyc01g112070.4 60 124 143 199 69 86 86 81 127 120 146 154 222 221 93 O-fucosyltransferase family protein (AHRD V3.3 *** A0A061DZG6_THECC) Solyc01g112080.3 2088 4973 4045 4702 9071 6640 7349 11940 4778 5948 5083 6024 5560 3685 1858 Lysm domain GPI-anchored protein 2 (AHRD V3.3 *** A0A2U1M2U7_ARTAN) AT2G17120 Solyc01g112090.3 164 282 276 302 364 348 391 304 210 197 194 273 200 235 240 Protein DETOXIFICATION (AHRD V3.3 *** A0A328D307_9ASTE) AT4G38380 Solyc01g112100.3 976 550 504 873 367 499 473 309 491 415 782 327 536 592 1089 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G3BW83_CAPCH) Solyc01g112105.1 0 0 0 0 0 4 0 0 0 2 0 0 0 0 0 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G2W997_CAPBA) Solyc01g112120.4 9 12 15 20 8 20 24 10 5 3 12 8 0 11 11 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G2XYN9_CAPAN) Solyc01g112130.4 0 3 0 4 9 7 10 8 3 0 0 6 1 2 10 Flavin-containing monooxygenase (AHRD V3.3 *-* A0A1U8E9P1_CAPAN) Solyc01g112140.4 240 335 474 413 589 580 660 617 501 199 384 300 273 355 429 Flavin-containing monooxygenase (AHRD V3.3 *** A0A1U8E9P1_CAPAN) Solyc01g112150.3 1387 2340 1435 1676 2420 2051 1686 2625 2483 1823 1409 2259 1926 2102 1286 SEC1 family transport protein SLY1 (AHRD V3.3 *** A0A2G2W9B3_CAPBA) AT2G17980 Solyc01g112160.4 109 367 371 299 403 488 489 398 309 172 309 263 374 398 289 Phosphoglycerate mutase family protein (AHRD V3.3 *** A0A2U1PWX4_ARTAN) AT4G38370 Solyc01g112170.3 423 268 245 329 157 199 180 167 200 288 175 176 319 319 294 Calcium-dependent protein kinase SK5 (AHRD V3.3 *** A0A2I0W0P2_9ASPA) Solyc01g112180.4 908 665 827 710 928 908 845 849 664 832 790 786 787 824 616 Integral membrane protein hemolysin-III-like protein (AHRD V3.3 *** A0A2K3N7X1_TRIPR) AT4G38280 Solyc01g112190.3 235 180 60 229 166 152 114 166 97 89 37 30 245 133 106 Plant regulator RWP-RK family protein, putative (AHRD V3.3 *** A0A061FD78_THECC) AT4G35270 Solyc01g112200.3 92 109 74 113 75 79 68 70 67 66 85 70 130 111 100 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1KAS6_ARTAN) AT2G17210 Solyc01g112210.3 995 789 758 783 790 784 668 720 855 851 532 895 773 938 790 Hexosyltransferase (AHRD V3.3 *** A0A2G2XVL2_CAPAN) AT4G38270 Solyc01g112220.4 772 350 536 357 120 130 158 110 252 558 497 264 522 431 426 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1KP77_ARTAN) AT2G17220 Solyc01g112230.4 184 22 64 13 4 2 5 0 12 24 44 29 7 95 368 Plant EC metallothionein-like protein (AHRD V3.3 *** A0A200PQZ1_9MAGN) AT2G23240 Solyc01g112240.4 912 1016 1055 917 1100 1009 1077 927 839 786 977 786 1166 1048 966 Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (AHRD V3.3 *** A0A2U1LK20_ARTAN) AT4G38240 Solyc01g112250.4 2594 2862 2242 2450 2702 2266 2019 3147 2917 3675 2260 2761 3365 2759 2320 Calcium dependent protein kinase (AHRD V3.3 *** Q43676_VIGRR) AT2G17290 Solyc01g112260.4 383 945 1408 1012 1159 1021 1079 850 1029 905 1920 659 657 459 930 hypothetical protein (AHRD V3.3 *-* AT4G35320.1) AT4G35320 Solyc01g112270.1 11 0 4 6 3 10 9 5 4 12 1 1 3 2 0 Pantothenate kinase (AHRD V3.3 *** A0A1P8B493_ARATH) Solyc01g112280.3 4258 3349 2668 3446 3108 2606 2258 3926 4949 5895 3752 5708 3065 3531 3505 partialaminoacylase-1 AT4G38220 Solyc01g112290.4 5228 3343 3903 3875 3169 3514 3586 2573 2140 3023 3375 2946 2593 3037 3539 Glutamate--tRNA ligase, chloroplastic/mitochondrial (AHRD V3.3 *** A0A2G3BWC0_CAPCH) AT5G64050 Solyc01g112310.4 1020 654 702 732 610 769 765 555 501 699 580 569 497 640 827 Chloride channel protein (AHRD V3.3 *** A0A1U8E0X8_CAPAN) AT4G35440 Solyc01g112315.1 3 3 0 4 8 7 9 7 3 2 2 19 0 16 2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LF16_TRIPR) Solyc01g112320.3 986 768 950 783 1028 893 793 1022 962 1037 693 956 781 883 697 Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2G3BWC6_CAPCH) AT4G38180 Solyc01g112330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ARID/BRIGHT DNA-binding domain (AHRD V3.3 *-* A0A200PR43_9MAGN) Solyc01g112340.3 648 975 571 725 991 824 793 1345 962 1327 543 1068 376 671 488 Brefeldin A-inhibited guanine nucleotide-exchange protein 4 (AHRD V3.3 *-* A0A2G2XW39_CAPAN) Solyc01g112350.3 1797 1660 1522 1714 1637 1952 1974 1797 2085 1976 1648 1909 1360 1808 1794 Brefeldin A-inhibited guanine nucleotide-exchange protein 4 (AHRD V3.3 *** A0A2G2XW39_CAPAN) AT4G38200 Solyc01g112370.3 3 4 2 1 2 5 2 3 1 4 2 8 2 4 13 Expressed protein (AHRD V3.3 *** AT4G25315.2) AT4G25315 Solyc01g112380.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g004000.1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 Regulator of rDNA transcription protein 15 (AHRD V3.3 *-* A0A2G2V0S9_CAPBA) Solyc02g004003.1 14 6 11 21 16 12 20 7 7 14 8 7 6 10 8 Unknown protein Solyc02g004005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g004007.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g044050.1 0 3 0 0 0 1 0 0 1 1 1 0 2 3 1 ABC transporter C family member 4 (AHRD V3.3 *-* A0A2G3AL92_CAPAN) Solyc02g044040.3 0 0 0 0 0 0 1 0 2 0 1 0 2 1 0 Dihydropyrimidine dehydrogenase (AHRD V3.3 *-* Q6Z744_ORYSJ) Solyc02g044030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *-* A0A061DXG0_THECC) Solyc02g044020.3 15 3 4 8 2 5 2 7 12 10 4 3 1 10 0 Dual-specificity RNA methyltransferase RlmN (AHRD V3.3 *-* A0A1J3CX71_NOCCA) Solyc02g044000.3 0 0 0 0 0 0 2 0 0 3 0 0 0 0 0 ABC transporter C family member 4 (AHRD V3.3 *-* A0A2G3AL92_CAPAN) AT2G05642 Solyc02g044005.1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 RNA-directed DNA polymerase (AHRD V3.3 *-* A0A2I0VXC8_9ASPA) Solyc02g043990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g043980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g043970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g043960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SPX domain-containing protein (AHRD V3.3 *-* D7M0A7_ARALL) Solyc02g043965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g043950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g043940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g043900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g043880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcineurin-like metallo-phosphoesterase superfamily protein (AHRD V3.3 *-* F4JMQ8_ARATH) Solyc02g043885.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 tRNA pseudouridine synthase (AHRD V3.3 *-* A0A2G3BLE9_CAPCH) Solyc02g043860.3 922 945 747 583 886 791 789 1180 1131 1098 684 1079 990 865 613 Insulinase (Peptidase family M16) family protein (AHRD V3.3 *** A0A2U1QK83_ARTAN) AT1G06900 Solyc02g043820.1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 Unknown protein Solyc02g043810.4 12 21 7 20 7 28 30 21 17 16 39 11 36 17 69 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** A0A2U1N0Z9_ARTAN) AT5G57200 Solyc02g043813.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zf-RVT domain-containing protein (AHRD V3.3 *-* A0A1Q3DKC4_CEPFO) Solyc02g043817.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g055560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g150122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g055550.3 221 130 202 161 127 171 178 138 79 135 274 169 127 104 208 Unknown protein Solyc02g055540.1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance protein (AHRD V3.3 *-* A0A2U1LYL9_ARTAN) Solyc02g055530.4 1 3 0 0 0 0 0 0 0 0 7 0 0 0 0 Pleiotropic drug resistance protein (AHRD V3.3 *-* A0A2U1LYL9_ARTAN) Solyc02g055533.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 glycerol-3-phosphate acyltransferase 3-like (AHRD V3.3 *-* A0A2I4GCC2_9ROSI) Solyc02g055537.1 2 1 6 6 2 2 6 4 0 0 1 4 1 0 13 Replication protein A 70 kDa DNA-binding subunit (AHRD V3.3 *-* A0A2U1LJ34_ARTAN) Solyc02g055500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Purine permease (AHRD V3.3 *-* A0A2R6Q6Y9_ACTCH),Pfam:PF16913 Solyc02g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g055470.2 50 65 33 21 70 32 43 83 71 81 7 52 45 67 47 hypothetical protein (AHRD V3.3 *-* AT3G19780.2) Solyc02g055460.3 588 496 476 608 521 502 483 442 473 519 452 508 520 499 485 hypothetical protein (AHRD V3.3 *-* AT3G19780.2) AT3G19780 Solyc02g055440.4 76 288 331 375 563 593 671 588 444 251 514 451 93 165 489 E3 ubiquitin-protein ligase%2C putative (DUF177) (AHRD V3.3 *** AT3G19800.2) AT3G19800 Solyc02g055430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g055390.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UTP:RNA uridylyltransferase 1-like (AHRD V3.3 *-* A0A2I4H6C8_9ROSI) Solyc02g055395.1 0 4 0 1 0 0 0 0 3 0 0 2 2 1 6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc02g049070.4 622 816 870 868 817 934 1039 784 635 426 828 617 851 781 907 ribosomal RNA small subunit methyltransferase J (AHRD V3.3 *** AT5G08540.1) AT5G08540 Solyc02g049080.1 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 Unknown protein Solyc02g049090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g049100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g150117.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc02g150118.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc02g150119.1 34 32 2 5 19 20 15 25 58 21 18 21 10 24 4 Heat-inducible transcription repressor (DUF639) (AHRD V3.3 *-* Q8VXZ2_ARATH) Solyc02g049108.1 133 39 60 60 41 110 82 83 62 43 50 75 35 40 40 DUF639 domain-containing protein (AHRD V3.3 *** A0A1Q3B335_CEPFO) Solyc02g050170.1 3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Ribonuclease H protein (AHRD V3.3 *-* A0A2I0VNF6_9ASPA) Solyc02g050180.4 146 60 108 78 93 125 114 81 50 64 162 123 46 65 102 DUF639 domain-containing protein (AHRD V3.3 *-* A0A1Q3B335_CEPFO) Solyc02g050190.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposon, En/Spm-like, Transposase-associated domain protein (AHRD V3.3 *-* A0A2U1N4P4_ARTAN) Solyc02g050195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g050200.2 172 253 194 160 267 280 255 497 269 248 156 359 153 283 105 BREAST CANCER 2 like 2A (AHRD V3.3 *** A0A1P8B5L3_ARATH) AT5G01630 Solyc02g050210.2 138 208 240 196 248 336 372 232 166 143 224 160 186 253 206 BREAST CANCER 2 like 2A (AHRD V3.3 *-* A0A1P8B5L3_ARATH) Solyc02g050240.4 478 783 474 363 795 660 578 1111 952 696 317 1009 577 570 359 Oligopeptidase B (AHRD V3.3 *-* A0A0G2RJN8_CAPAN) Solyc02g050260.2 601 899 819 821 1330 1166 1079 1331 850 887 657 974 909 894 669 Oligopeptidase B (AHRD V3.3 *** A0A0G2RJN8_CAPAN) AT1G50380 Solyc02g050263.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) Solyc02g050265.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g050267.1 6 2 9 11 1 3 1 0 9 11 17 2 7 2 34 Unknown protein Solyc02g050280.4 1409 1185 1234 1137 970 1067 973 1095 1196 1256 1032 1172 1104 1313 1235 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (AHRD V3.3 *** A0A1I9LTA7_ARATH) AT1G50410 Solyc02g050290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *-* A0A0C5B9X0_9SOLA) Solyc02g050300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcriptional corepressor LEUNIG-like isoform X3 (AHRD V3.3 *-* XP_023881424.1) Solyc02g050320.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g050330.1 138 104 67 91 74 69 105 47 66 86 83 57 65 73 107 Unknown protein Solyc02g150120.1 2066 2895 2400 2635 4032 3626 3303 4001 2543 3313 2297 3076 2913 2751 1981 Calcium-binding EF hand family protein (AHRD V3.3 *** Q9FNN0_ARATH) AT5G08580 Solyc02g005000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin carboxyl-terminal hydrolase 20-like (AHRD V3.3 *-* XP_019067536.1) Solyc02g005003.1 810 537 422 748 361 449 463 361 408 513 492 436 341 463 482 Unknown protein Solyc02g005007.1 5 8 24 0 10 12 14 11 5 0 3 14 10 10 0 Guanylate-binding family protein (AHRD V3.3 *-* A0A2U1PP48_ARTAN) Solyc02g005070.3 7 0 53 0 32 6 18 2 0 1 1 80 15 2 1 Long chain base biosynthesis protein 2d (AHRD V3.3 *-* A0A2G2X885_CAPBA) Solyc02g005100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005110.3 129 141 285 279 256 299 385 154 264 153 518 176 178 217 466 MADS-box protein SOC1 (AHRD V3.3 --* XP_025887600.1) Solyc02g005140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005180.3 764 470 373 587 659 712 842 572 482 521 399 499 368 368 501 Sugar facilitator protein 2 Solyc02g005200.4 1580 839 836 810 587 774 685 637 864 1215 883 882 694 778 1054 RNA binding protein (AHRD V3.3 *** A0A2U1QF55_ARTAN) AT3G08010 Solyc02g005210.3 691 447 408 424 469 428 443 441 425 575 537 515 409 385 472 Cofactor assembly of complex C (AHRD V3.3 *** A0A2U1QJQ4_ARTAN) AT3G26710 Solyc02g005280.1 49 48 44 43 18 28 26 39 28 33 51 26 69 65 34 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q5Q8_9MAGN) AT1G50270 Solyc02g005290.4 1112 1073 1055 967 1252 1230 1124 1257 950 948 886 898 1057 1000 970 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G3A4Z8_CAPAN) Solyc02g005300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005305.1 412 402 271 360 499 428 385 429 375 378 318 432 388 396 137 Unknown protein Solyc02g005310.3 274 181 190 201 103 189 163 65 110 96 268 103 104 141 335 Unknown protein Solyc02g005320.2 402 169 247 192 141 163 124 101 232 131 200 144 148 218 333 Unknown protein Solyc02g005325.1 110 57 63 67 37 59 53 60 68 64 69 64 42 60 54 Unknown protein Solyc02g005330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) Solyc02g005340.4 16 17 102 87 97 95 83 91 8 16 73 2 19 0 66 Yellow stripe-like protein (AHRD V3.3 *** A0A2D1UXE7_ROSHC) Solyc02g005350.3 1207 1559 802 766 751 598 830 602 1469 1310 833 1568 1309 1306 982 succinyl-CoA ligase alpha 2 subunit AT5G23250 Solyc02g005360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 enhancer of mRNA-decapping protein 4-like (AHRD V3.3 *-* A0A2I4F2H1_9ROSI) Solyc02g005390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flavin-containing monooxygenase (AHRD V3.3 *-* A0A2G3CRK5_CAPCH) Solyc02g005400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flavin-containing monooxygenase (AHRD V3.3 *-* A0A2G2W225_CAPBA) Solyc02g005410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flavin-containing monooxygenase (AHRD V3.3 *-* A0A2G2W225_CAPBA) Solyc02g005420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005480.4 532 540 504 498 598 422 462 540 572 544 380 511 632 595 525 E3 ubiquitin ligase BIG BROTHER-related (AHRD V3.3 *-* A0A2I4ED69_9ROSI) Solyc02g005490.3 7 10 7 3 3 5 4 1 4 6 4 6 4 2 1 60S acidic ribosomal protein P1-like (AHRD V3.3 --* XP_026407736.1),Pfam:PF00428 Solyc02g005500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005510.4 271 235 374 307 392 327 363 276 235 194 357 272 291 280 389 Transcriptional coactivator/pterin dehydratase (AHRD V3.3 *** A0A1P8AWX1_ARATH) AT1G29810 Solyc02g005520.2 63 59 57 80 42 56 39 66 46 65 19 57 71 74 40 pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial isoform X5 (AHRD V3.3 *-* XP_025884931.1) Solyc02g005525.1 16 2 1 9 2 0 1 1 9 4 0 0 5 5 16 Unknown protein Solyc02g005550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G3AFL7_CAPAN) Solyc02g005601.1 3 1 0 0 0 0 0 0 0 0 1 0 0 1 10 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** Q9C6M0_ARATH) Solyc02g005602.1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 Potassium channel KAT1 (AHRD V3.3 *-* A0A2G3ANB5_CAPAN) Solyc02g005603.1 1364 1035 1109 1240 1135 1218 1139 1133 986 1286 1333 1059 1143 975 1085 UPF0664 stress-induced protein C29B12.11c (AHRD V3.3 *** A0A1J3H3L4_NOCCA) AT5G11680 Solyc02g005604.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) Solyc02g150100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g005606.1 78 31 35 81 0 2 2 0 17 23 80 14 35 43 197 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 *-* XP_019069006.1) Solyc02g005607.1 5 6 4 1 29 37 26 17 11 3 20 6 2 4 0 RWP-RK domain-containing protein (AHRD V3.3 *-* A0A1Q3AZ30_CEPFO) AT1G74480 Solyc02g005608.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0W6G5_9ASPA) Solyc02g010680.1 0 0 0 0 0 3 0 2 0 0 0 0 0 0 0 Unknown protein Solyc02g011680.4 22 58 45 45 48 59 58 47 53 27 35 25 94 74 92 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A4J6_CAPAN) AT5G27110 Solyc02g011700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plasma membrane ATPase (AHRD V3.3 *-* A0A2R6WXN5_MARPO) Solyc02g011710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* J7H711_CAPAN) Solyc02g011720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* A0A0B4ZNM2_PASSA) Solyc02g150101.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis protein CcsA (AHRD V3.3 *-* A0A2G2YJH0_CAPAN) Solyc02g011730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis protein CcsA (AHRD V3.3 *-* A0A2G2YJH0_CAPAN) Solyc02g011740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* R4PK39_UTRGI) Solyc02g011750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* A0A1U8QCJ1_CAPAN) Solyc02g011760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I iron-sulfur center (AHRD V3.3 *-* A0A141SC60_9ERIC) ATCG01060 Solyc02g011770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic (AHRD V3.3 *** A0A2G3BMB3_CAPCH) ATCG01080 Solyc02g011780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (AHRD V3.3 *** I6N9B1_DATST) Solyc02g011790.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *-* A0A2G2Z7P0_CAPAN) Solyc02g011800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *** A0A2G2XWW7_CAPAN) Solyc02g011810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *-* A0A2G3B5W4_CAPCH) Solyc02g011820.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* I6N9B5_DATST) Solyc02g011830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc02g011840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc02g011845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc02g011850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc02g011860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* I6N9B5_DATST) Solyc02g011870.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g011890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A076N3W2_SPIPO) Solyc02g011900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A125RTJ3_9ASTR) Solyc02g011910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A2Z5UDE9_9ASPA) Solyc02g011920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0U1ZJJ5_9SOLN) Solyc02g011940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0F7BHY0_9SOLA) Solyc02g011950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc02g011960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2H4NY40_9ERIC) Solyc02g011970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1B1MSL2_9APIA) Solyc02g150102.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2, chloroplastic (AHRD V3.3 *** A0A1D6YY87_9MAGN) Solyc02g011990.1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *** A0A1U8QBZ9_CAPAN) Solyc02g011995.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S16, chloroplastic (AHRD V3.3 *-* J7H6Q0_CAPAN) Solyc02g012000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *-* A0A0G2R8I1_MESCR) Solyc02g012010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *-* E5KU81_CORLA) Solyc02g012020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit b, chloroplastic (AHRD V3.3 *** I6N943_DATST) Solyc02g012025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit c, chloroplastic (AHRD V3.3 *** A0A1U8QD53_CAPAN) Solyc02g014020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4HS67_9ROSI) Solyc02g014030.3 471 391 579 285 114 111 90 176 261 723 451 284 550 317 206 Serine/threonine/dual specificity protein kinase, catalytic domain-containing protein (AHRD V3.3 *** A0A2U1M6E8_ARTAN) Solyc02g014035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L2B9_TRIPR) ATMG00240 Solyc02g014040.1 6 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1KP77_ARTAN) Solyc02g014050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *-* A0A2U1KP77_ARTAN) Solyc02g014060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase (AHRD V3.3 *-* A0A2U1PRE4_ARTAN) Solyc02g014070.2 8 13 3 18 5 6 17 10 7 6 30 8 12 13 22 Protein kinase superfamily protein (AHRD V3.3 *-* A0A2U1KP77_ARTAN) Solyc02g150103.1 2 6 0 1 3 2 1 3 5 1 3 2 1 0 1 receptor-like protein kinase FERONIA (AHRD V3.3 *-* A0A2I4HS69_9ROSI) Solyc02g150104.1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014090.3 698 606 693 705 587 736 588 531 596 576 992 559 743 600 797 Peptidoglycan-binding LysM domain-containing protein (AHRD V3.3 *** Q8VYP8_ARATH) AT5G08200 Solyc02g014110.1 89 85 107 137 112 110 122 58 64 65 97 60 83 117 80 Unknown protein Solyc02g014115.1 6313 3681 2905 5013 3092 3042 3348 3114 2648 5124 2962 3579 2793 3459 2872 ENHANCER OF AG-4 protein 2-like (AHRD V3.3 *-* A0A2I4ED54_9ROSI) Solyc02g014130.3 861 598 340 398 414 438 430 654 703 597 245 480 372 547 356 ENHANCER OF AG-4 protein 2-like (AHRD V3.3 *** A0A2I4ED54_9ROSI) Solyc02g014140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan galactosyltransferase KATAMARI1-like protein (AHRD V3.3 *** A0A1J3CAN7_NOCCA) AT1G68470 Solyc02g014150.4 453 818 568 518 696 655 678 839 729 645 571 742 538 742 426 Photosystem II stability/assembly factor HCF136 (AHRD V3.3 *** A0A1Y1IDD9_KLENI) AT5G23120 Solyc02g014170.3 1049 850 781 1206 814 1137 1235 788 860 996 1154 863 890 840 1088 Zinc finger, C3HC4 type (AHRD V3.3 *-* A0A2U1NDX1_ARTAN) Solyc02g014180.2 382 377 307 353 442 345 403 399 513 489 362 419 268 373 345 Zinc finger C3HC4 type (RING finger) protein (AHRD V3.3 *-* A0A2K3NL88_TRIPR) Solyc02g014190.4 143 193 145 205 269 172 274 252 343 252 197 207 127 173 213 Zinc finger C3HC4 type (RING finger) protein (AHRD V3.3 *** A0A2K3NPJ4_TRIPR) AT5G23110 Solyc02g014220.3 7 12 2 15 3 0 0 4 2 9 1 3 1 8 21 Endoglucanase (AHRD V3.3 *** A0A2G3D2B5_CAPCH) AT1G48930 Solyc02g014230.1 142 67 74 90 10 59 43 36 48 115 101 57 82 101 196 Disease resistance protein RGA2 (AHRD V3.3 *-* A0A2G2XMC9_CAPBA) Solyc02g014240.2 154 77 53 103 32 63 45 29 58 88 74 37 92 75 142 Disease resistance protein RGA2 (AHRD V3.3 *-* A0A2G3DCZ1_CAPCH) Solyc02g014250.3 22 17 28 11 3 6 5 1 10 12 13 8 4 16 38 Disease resistance protein RGA2 (AHRD V3.3 *-* A0A2G2XMC9_CAPBA) Solyc02g014290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Rapid ALkalinization Factor (AHRD V3.3 *-* K2REH2_MACPH) AT1G61566 Solyc02g014300.2 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G2VTJ6_CAPBA) AT5G04960 Solyc02g014310.4 10476 13688 9198 6824 6134 5444 5445 7863 9039 7598 5477 9245 17146 13972 9116 glycine rich protein X55695 AT1G48920 Solyc02g014320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *-* A0A2U1Q5Y6_ARTAN) Solyc02g150105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2K3P8C1_TRIPR) Solyc02g014340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell division cycle protein 48-like protein (AHRD V3.3 *-* A0A2G2WIS5_CAPBA) Solyc02g014350.4 837 1111 838 732 954 929 940 956 898 582 659 727 995 1077 867 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** F4JCC9_ARATH) AT3G19740 Solyc02g014360.3 201 425 533 936 535 803 738 734 407 290 538 610 472 655 441 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8FF53_CAPAN) AT4G14850 Solyc02g014380.3 775 830 893 947 1133 1198 1234 1037 874 917 876 838 942 863 811 protein odr-4 homolog (AHRD V3.3 *** A0A2I4GXT3_9ROSI) AT3G28670 Solyc02g014385.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3K694_NOCCA) Solyc02g014400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 replication factor A protein 1-like (AHRD V3.3 --* XP_024964661.1) Solyc02g014430.3 14 58 48 37 121 92 119 116 57 58 61 49 28 69 56 Equilibrative nucleotide transporter like (AHRD V3.3 *** A0A2R6QTM2_ACTCH) AT4G05120 Solyc02g014440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014450.3 259 267 370 459 534 517 522 517 327 211 361 276 327 364 580 Rab-GTPase-TBC domain (AHRD V3.3 *** A0A200PLY8_9MAGN) Solyc02g014460.4 341 1219 683 619 1484 1453 1410 1568 918 724 423 965 729 840 329 DNA damage-binding protein CMR1 (AHRD V3.3 *** R4XC35_TAPDE) AT1G80710 Solyc02g014470.4 7 27 21 31 40 47 33 13 21 27 25 11 8 20 27 Phospholipase A1-II 1 (AHRD V3.3 *** A0A1U8EZV6_CAPAN) AT4G18550 Solyc02g014480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014490.4 4 7 7 15 1 4 0 0 2 1 4 0 0 7 0 glycerophosphodiester phosphodiesterase GDPDL6-like (AHRD V3.3 *** A0A2I4H2H1_9ROSI) Solyc02g014520.4 1384 1048 1045 952 796 794 812 862 1051 990 849 1048 805 862 826 SET domain-containing protein (AHRD V3.3 *** A0A1Q3AV79_CEPFO) AT2G18850 Solyc02g014525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc02g014530.4 3 18 13 10 9 2 6 4 7 17 11 21 13 25 11 glycerophosphodiester phosphodiesterase GDPDL6-like (AHRD V3.3 *** A0A2I4H2H1_9ROSI) Solyc02g014540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin-related protein 2/3 complex subunit 3 (AHRD V3.3 *** A0A2G2Z0K1_CAPAN) Solyc02g014543.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014547.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc02g014560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium uptake protein mitochondrial-like (AHRD V3.3 *** A0A2K3MWX9_TRIPR) AT4G32060 Solyc02g014570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014670.2 0 1 0 0 0 0 0 0 0 0 0 0 0 3 1 BTB/POZ domain protein (AHRD V3.3 *** A0A1I9LLD2_ARATH) AT3G19920 Solyc02g014680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014720.4 1121 970 1372 1347 1196 1308 1212 938 998 1032 1196 993 912 1059 1451 HD domain-containing protein (AHRD V3.3 *** A0A1Q3BWL8_CEPFO) AT1G17330 Solyc02g014730.3 0 1 1 0 3 1 0 0 3 1 0 1 0 4 4 Cytochrome P450 (AHRD V3.3 *** A0A2U1QJ26_ARTAN) AT5G23190 Solyc02g014740.2 56 126 152 100 109 126 85 142 105 79 66 228 70 102 9 DNA-binding storekeeper transcriptional regulator (AHRD V3.3 *-* A0A2K3LQD1_TRIPR) Solyc02g014750.2 246 353 386 201 338 340 257 408 250 433 152 550 184 358 113 DNA-binding storekeeper transcriptional regulator (AHRD V3.3 *-* A0A2K3LQD1_TRIPR) Solyc02g014770.3 1825 1645 1433 1477 1244 1426 1425 1635 1304 1452 1097 1600 1560 1847 1212 RNA helicase DEAH-box7 AT2G02090 Solyc02g014773.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 *-* AT5G23160.1) Solyc02g150106.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G3AK65_CAPAN) Solyc02g014790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A167NIB9_9SOLA) Solyc02g014800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2XBS0_CAPBA) Solyc02g014820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1L2BNQ8_NICOT) Solyc02g014830.4 99 105 64 46 60 80 60 73 47 68 29 66 30 49 47 Carboxypeptidase (AHRD V3.3 *** A0A2G2XBM8_CAPBA) AT5G23210 Solyc02g014840.3 259 156 267 205 107 85 95 75 72 185 320 138 150 190 113 Unknown protein Solyc02g150107.1 0 3 0 12 0 2 0 0 3 0 3 12 0 1 13 Unknown protein Solyc02g014860.3 461 72 554 530 8 1 8 1 627 175 712 225 357 758 848 Chaperone protein DnaJ (AHRD V3.3 *** A0A1J3ID64_NOCCA) AT5G23240 Solyc02g014870.4 511 650 947 810 864 924 980 796 747 518 928 709 804 717 699 Thioredoxin-like protein 4A (AHRD V3.3 *** A0A1U8FQI4_CAPAN) AT5G08290 Solyc02g014871.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014872.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g150108.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014874.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014876.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g014878.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g020870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g020880.2 32 27 22 7 19 20 12 17 21 24 2 32 8 24 3 Unknown protein Solyc02g020890.4 845 603 1120 1039 563 563 529 463 454 876 1511 674 621 634 696 alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT3G19970.5) AT3G19970 Solyc02g020900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g020910.4 1620 1776 1323 1522 1792 1751 1806 1934 1954 1596 1240 1430 1507 1493 1556 Unknown protein Solyc02g020920.1 12 16 38 4 111 140 123 147 23 24 45 67 15 18 5 Unknown protein Solyc02g020930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g020940.3 773 1460 1196 1171 1110 1138 1200 1144 1455 1053 1574 711 934 693 2019 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A2G3D2C2_CAPCH) AT1G12900 Solyc02g020960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *** J7H3U2_CAPAN) Solyc02g020970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g020980.4 1198 1501 1541 1486 1679 1649 1784 2081 1880 1572 1332 1442 1290 1496 1489 4-alpha-glucanotransferase (AHRD V3.3 *** Q6R608_SOLTU) AT2G40840 Solyc02g021000.3 345 354 533 479 380 442 455 308 298 317 503 313 208 291 503 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic (AHRD V3.3 *** A0A2I4G7H0_9ROSI) AT5G36120 Solyc02g021010.2 154 96 145 144 93 128 121 55 75 56 150 95 86 156 183 Unknown protein Solyc02g021020.4 601 474 430 626 504 480 596 488 455 643 524 505 420 404 425 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3D2E2_CAPCH) AT2G17140 Solyc02g021050.3 104 130 94 127 116 129 121 114 147 91 126 150 160 143 93 BTB/POZ domain protein%2C putative (DUF177) (AHRD V3.3 *** AT3G19810.2) AT3G19810 Solyc02g021060.4 345 284 340 254 335 312 283 319 236 354 258 281 361 364 214 Uracil-DNA glycosylase (AHRD V3.3 *** A0A2G2XBC7_CAPBA) AT3G18630 Solyc02g150109.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CPS6_CEPFO) Solyc02g021067.1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ABC transporter B family member 11 (AHRD V3.3 *-* A0A2G2VP62_CAPBA) Solyc02g021100.3 1508 1096 1295 1099 1187 1299 1150 1104 1008 1121 1068 1089 1012 1319 1230 Methyl-CpG-binding domain protein 4-like protein (AHRD V3.3 *** MBD4L_ARATH) AT3G07930 Solyc02g021105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021140.3 945 941 1117 874 836 767 884 758 913 924 929 920 1079 1047 837 Superoxide dismutase (AHRD V3.3 *** A0A1U8EWU2_CAPAN) AT5G23310 Solyc02g021150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021160.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021163.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021167.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A1U8FGU3_CAPAN) Solyc02g021190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3D2T3_CAPCH) Solyc02g021210.1 18 10 38 28 13 24 13 18 24 13 84 12 21 47 36 BTB domain-containing protein/NPH3 domain-containing protein (AHRD V3.3 *-* A0A1Q3D7J0_CEPFO) Solyc02g021220.1 49 24 42 34 25 6 17 9 14 23 2 21 63 9 36 Subtilisin-like protease (AHRD V3.3 *** A0A1J3JRH1_NOCCA) Solyc02g021230.4 132 113 117 140 229 139 155 96 100 107 98 146 148 109 170 Nucleotide-diphospho-sugar transferase (AHRD V3.3 *** A0A200Q0X1_9MAGN) AT1G14590 Solyc02g021235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *-* A0A1U8FCX0_CAPAN) Solyc02g021240.3 1088 874 805 881 1047 1096 776 1040 966 1111 797 1013 878 802 813 oligopeptide transporter 1 AT2G02040 Solyc02g021250.1 11 16 21 18 37 19 34 27 16 12 6 21 17 15 2 Unknown protein Solyc02g021260.3 251 278 566 441 778 888 800 1081 543 594 673 959 180 399 236 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3DFU3_CEPFO) Solyc02g021270.3 290 222 246 225 157 200 211 186 189 161 167 146 182 284 213 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QSI9_9MAGN) AT2G02150 Solyc02g021290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *-* A0A2G2W5D4_CAPBA) Solyc02g021330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit C (AHRD V3.3 *-* A0A0D3GXF4_9ORYZ) Solyc02g021340.4 323 196 121 223 185 172 172 215 216 185 181 178 326 211 188 Transport/golgi organization-like protein (DUF833) (AHRD V3.3 *** F4JTM0_ARATH) AT4G38260 Solyc02g021350.4 1 0 1 0 9 3 2 4 1 0 0 0 0 1 0 NAP1-related protein 1 (AHRD V3.3 *** A0A2G3A4W4_CAPAN) Solyc02g021360.3 1034 1419 1464 1541 1708 1904 1987 1845 1590 1080 1338 1342 1353 1594 1301 Katanin p80 WD40 repeat-containing subunit B1 homolog (AHRD V3.3 *** A0A2G3D2K6_CAPCH) AT5G23430 Solyc02g021365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A2G3D2T0_CAPCH) Solyc02g021390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATPase subunit 4 (AHRD V3.3 *-* A0A060DDU8_9GENT) Solyc02g021400.2 1015 2097 2077 1864 2053 2192 2258 1627 1137 798 1794 1239 3057 2600 2319 40S ribosomal protein S28 (AHRD V3.3 *** A0A2G3BI08_CAPCH) AT5G03850 Solyc02g021410.4 6 12 45 52 49 66 62 47 33 24 35 19 28 8 51 cation/H(+) antiporter 15-like (AHRD V3.3 *-* A0A2I4GL35_9ROSI) Solyc02g021420.3 801 1394 1045 1202 1326 1278 1466 1318 1361 864 881 934 1367 1374 1118 villin-4-like (AHRD V3.3 *** A0A1U7XDQ7_NICSY) AT4G30160 Solyc02g021430.1 261 505 228 543 1003 737 880 954 507 483 340 473 339 298 307 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** O64685_ARATH) AT2G34620 Solyc02g021440.4 1147 1305 1577 1356 1596 1558 1485 1551 1930 1838 1529 1446 1247 1619 1874 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G3A4W0_CAPAN) AT1G30270 Solyc02g021450.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Myosin heavy chain-like protein (AHRD V3.3 *** A0A2K3P1M8_TRIPR) AT4G03620 Solyc02g021470.4 2522 1805 1496 1464 1614 1548 1490 1989 1791 2096 1510 1850 1671 1521 1345 cullin AT5G46210 Solyc02g150110.1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021480.4 405 290 329 357 355 402 430 287 340 265 349 357 308 339 331 Magnesium transporter CorA-like family protein (AHRD V3.3 *-* A0A2K3P294_TRIPR) Solyc02g021490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Magnesium transporter CorA-like family protein (AHRD V3.3 *-* A0A2K3P294_TRIPR) Solyc02g021520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021550.3 614 673 538 525 533 506 474 447 537 422 493 410 922 798 657 Eukaryotic translation initiation factor 4E (AHRD V3.3 *** Q00LS7_NICBE) AT4G18040 Solyc02g021560.4 3848 4145 3890 4295 3575 3343 3330 3867 4450 3529 2745 4113 4793 4664 3731 RNA-binding (RRM/RBD/RNP motif) family protein (AHRD V3.3 *** A0A2K3L2Z0_TRIPR) AT3G15010 Solyc02g021590.3 1122 1084 931 1233 1423 1437 1428 1488 1111 922 952 1280 850 921 1001 Protein male discoverer 2 (AHRD V3.3 *** A0A1J6KDE9_NICAT) AT5G45840 Solyc02g021600.1 389 380 292 383 255 327 263 303 279 377 289 241 396 306 226 F-box/kelch-repeat protein (AHRD V3.3 *** A0A2G2VW95_CAPBA) AT1G30090 Solyc02g021620.3 338 342 277 369 237 393 428 307 268 252 318 235 199 270 343 Cation-chloride cotransporter 1 (AHRD V3.3 *** A0A1U8GM21_CAPAN) AT1G30450 Solyc02g021630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021640.3 504 1071 831 882 1454 1339 1232 1438 1430 1000 906 1502 816 873 704 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A1U8FH79_CAPAN) AT1G30440 Solyc02g021650.3 1873 2241 1445 1543 2032 1762 1713 2455 2362 1825 1123 1996 2060 2005 1350 UV damaged DNA binding protein 1 AT4G05420 Solyc02g021660.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Protein kinase domain-containing protein (AHRD V3.3 *-* A0A2U1M6F3_ARTAN) Solyc02g021670.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Protein kinase superfamily protein (AHRD V3.3 *-* A0A1P8ANC9_ARATH) Solyc02g021680.3 322 196 507 182 210 196 183 133 139 261 539 174 224 178 455 WRKY transcription factor 35 AT1G30650 Solyc02g021685.1 0 0 0 0 0 0 0 4 0 0 3 0 0 0 0 Unknown protein Solyc02g021700.4 443 376 290 309 426 370 353 428 408 354 356 346 330 400 358 Alpha N-terminal protein methyltransferase 1 (AHRD V3.3 *** A0A1U8FFG8_CAPAN) AT5G44450 Solyc02g021760.3 1408 1184 910 825 873 979 925 1034 1036 988 930 1113 1028 1251 1249 Zinc finger transcription factor 16 AT1G30460 Solyc02g021770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 1 (AHRD V3.3 *-* A0A2G3CV23_CAPCH) Solyc02g021780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kinase family protein (AHRD V3.3 *-* S8C376_9LAMI) Solyc02g021785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g021800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A1J3DTB7_NOCCA) Solyc02g021810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A1J3DTB7_NOCCA) Solyc02g022810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g022830.3 834 907 631 637 764 756 663 782 673 532 703 692 868 874 763 Twinkle-like protein, chloroplastic/mitochondrial (AHRD V3.3 *** A0A1J3F578_NOCCA) AT1G30680 Solyc02g022850.1 309 287 359 252 116 103 73 76 338 723 362 222 303 284 167 FAD-binding Berberine family protein (AHRD V3.3 *** A0A1P8ATP1_ARATH) AT4G20840 Solyc02g022860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1MQE5_ARTAN) Solyc02g022870.4 747 1182 964 912 872 1200 1123 1088 986 645 584 876 1019 1346 1056 maternal effect embryo arrest 22 (AHRD V3.3 *-* AT2G34780.4) AT2G34780 Solyc02g022880.1 163 70 170 111 112 114 99 116 103 64 154 80 96 125 229 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3JID9_9ROSI) Solyc02g022890.3 469 341 684 492 340 547 415 388 272 340 402 338 304 236 464 Fatty acid hydroxylase (AHRD V3.3 *-* A0A200Q3T8_9MAGN) Solyc02g022900.3 109 80 214 171 68 142 114 99 79 89 153 97 85 93 96 Unknown protein Solyc02g022910.4 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 Fatty acid hydroxylase (AHRD V3.3 *** A0A200Q3T8_9MAGN) Solyc02g022920.1 159 189 181 231 293 255 238 299 249 269 175 315 257 273 280 ethylene-responsive nuclear protein AT5G44350 Solyc02g022930.3 232 181 172 207 176 185 207 216 240 170 183 186 236 219 151 3-hydroxyisobutyrate dehydrogenase (AHRD V3.3 *** A0A1U8FBY0_CAPAN) AT4G20930 Solyc02g022935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Golgi-associated plant pathogenesis-related protein 1 (AHRD V3.3 --* A0A226DTU7_FOLCA) Solyc02g023940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g023950.3 151 354 517 450 441 509 469 466 506 388 434 442 454 479 271 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A061G8R7_THECC) AT4G20940 Solyc02g023970.3 2718 3633 2376 1942 2653 2256 2110 2883 2407 2340 1480 2305 3697 3051 2449 Obg-like ATPase 1 (AHRD V3.3 *** A0A2G2XB41_CAPBA) AT1G30580 Solyc02g023980.3 320 304 255 279 215 230 303 263 270 365 212 245 362 320 321 ATPase (AHRD V3.3 *** A0A200Q5U6_9MAGN) AT1G30540 Solyc02g023990.3 56 114 138 130 134 88 137 108 156 98 80 112 57 119 87 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1KWY0_ARTAN) AT4G20760 Solyc02g024000.4 274 353 238 245 245 266 292 302 376 243 262 281 371 419 386 WPP domain-associated protein (AHRD V3.3 *** A0A2G2XDL8_CAPBA) AT2G34730 Solyc02g024010.1 143 136 204 170 146 76 90 83 137 133 184 82 124 179 279 transmembrane protein (AHRD V3.3 *** AT4G21740.1) AT4G21740 Solyc02g024020.3 245 318 317 265 319 244 227 262 313 188 222 248 297 259 303 Calcium-dependent ARF-type GTPase activating protein family (AHRD V3.3 *** A0A2U1Q799_ARTAN) AT4G21160 Solyc02g024040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type protein 1 (AHRD V3.3 *-* A0A1J3FK19_NOCCA) Solyc02g024045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) Solyc02g024050.3 1143 2521 2029 2264 2567 2083 1974 2789 2989 2077 1750 2362 3164 2572 1670 Ferredoxin--NADP reductase, chloroplastic (AHRD V3.3 *** K4B553_SOLLC) AT1G30510 Solyc02g024060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *-* A0A2U1P056_ARTAN) Solyc02g024070.3 1557 2961 4333 3807 4701 4904 5256 5056 4524 3326 4350 4396 3369 3546 2941 Homeobox leucine-zipper protein (AHRD V3.3 *** A0A2U1QME9_ARTAN) AT2G34710 Solyc02g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g026080.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3CKL9_CEPFO) AT5G60140 Solyc02g027080.2 272 252 306 288 243 256 317 217 320 320 297 258 241 299 398 Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *-* AT1G58390.2) Solyc02g030080.4 3933 3047 1743 1575 1502 1689 1645 1600 1754 1833 1677 1684 2467 2449 1816 WD repeat-containing protein 43-like (AHRD V3.3 *** A0A2I4EEZ8_9ROSI) AT5G11240 Solyc02g030090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030100.4 254 434 259 353 616 414 410 581 459 508 249 399 304 369 323 Vacuolar protein sorting-associated protein 54, chloroplastic (AHRD V3.3 *-* A0A2G3D2K9_CAPCH) Solyc02g030110.2 530 577 517 622 699 655 677 717 698 539 573 529 567 672 719 Vacuolar protein sorting-associated protein 54, chloroplastic (AHRD V3.3 *** A0A1U8FS35_CAPAN) AT4G19490 Solyc02g030120.3 61 141 144 73 149 198 189 129 125 86 182 143 62 112 107 Subtilisin-like protease-like protein (AHRD V3.3 *** A0A2K3PRK8_TRIPR),Pfam:PF17766 Solyc02g030130.4 247 642 566 539 899 834 850 938 666 622 491 801 370 418 266 Subtilisin-like protease (AHRD V3.3 *** A0A1J3H877_NOCCA) Solyc02g030133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g150112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030170.4 12439 13176 14475 13997 15198 16148 14149 16377 18718 15280 13555 19440 13615 13061 14152 DWARF1/DIMINUTO AT3G19820 Solyc02g030190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030200.1 51 49 17 28 39 33 32 43 34 44 34 23 30 23 26 Integrase-type DNA-binding superfamily protein (AHRD V3.3 *-* AT2G41710.3) Solyc02g030210.4 825 510 597 522 521 508 594 492 479 493 565 379 399 513 937 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3D2M5_CAPCH) AT2G41710 Solyc02g030220.1 0 0 0 1 0 0 0 0 0 3 0 0 0 0 0 Extensin-like protein Dif10 (AHRD V3.3 *-* Q43504_SOLLC) Solyc02g030225.1 435 473 458 564 647 497 477 407 751 703 911 626 455 479 1100 UDP-glucose 4-epimerase (AHRD V3.3 *** A0A1Y1ITM0_KLENI) Solyc02g030240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030243.1 851 1410 876 939 941 1018 1055 1153 1068 940 916 838 1522 1165 1230 Coatomer subunit epsilon (AHRD V3.3 *** A0A1U8FJB3_CAPAN),Pfam:PF04733 AT1G30630 Solyc02g030247.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitin-binding lectin 1 (AHRD V3.3 *** A0A2G3B766_CAPCH) Solyc02g030260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cc-nbs-lrr resistance protein (AHRD V3.3 *-* A0A2U1NMN8_ARTAN) Solyc02g030270.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* AT3G44480.5) Solyc02g030280.2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 NBS-LRR resistance protein (AHRD V3.3 *** A0A2K3LKG9_TRIPR) Solyc02g030290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-LRR disease resistance-like protein (AHRD V3.3 *** Q2LED6_9ROSI) AT5G45440 Solyc02g030300.3 40 26 21 27 17 4 0 0 42 22 9 6 40 16 62 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A1U8FGU3_CAPAN) Solyc02g030310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *-* A0A2U1KZG5_ARTAN) Solyc02g030313.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A1J3CN06_NOCCA) Solyc02g030317.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A1U8FGU3_CAPAN) Solyc02g030350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor protein kinase (AHRD V3.3 *-* Q40096_IPOTF) Solyc02g030370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MTR7_TRIPR),Pfam:PF14223 Solyc02g030375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3D2T3_CAPCH) AT5G39370 Solyc02g030420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *-* A0A2U1N0U6_ARTAN) Solyc02g030430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type protein 1 (AHRD V3.3 *-* A0A2U1NYF9_ARTAN) Solyc02g030450.3 600 421 462 438 356 394 370 377 331 419 323 372 438 396 392 Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** A0A2G3D211_CAPCH) Solyc02g030460.2 2617 2981 4840 6360 7633 7827 6797 7558 3204 4142 4411 7691 3069 4075 2476 trihelix transcription factor ASR3-like isoform X1 (AHRD V3.3 *** A0A2I4HRK6_9ROSI) AT1G31310 Solyc02g030461.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc02g030462.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxisome biogenesis protein 2 (AHRD V3.3 *-* A0A2G2X6N8_CAPBA) Solyc02g150113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nucleotide/sugar transporter family protein (AHRD V3.3 *-* A0A1P8BH42_ARATH) Solyc02g150114.1 0 0 9 8 13 5 12 8 1 0 1 0 3 2 0 glucan endo-1,3-beta-glucosidase 8-like precursor (AHRD V3.3 --* NP_001305571.1) Solyc02g030468.1 0 0 7 0 0 0 0 1 0 0 0 0 8 0 0 Unknown protein Solyc02g030480.4 51 295 286 301 199 179 175 211 317 202 311 242 267 254 188 Alcohol dehydrogenase superfamily (AHRD V3.3 *-* A0A200Q008_9MAGN) Solyc02g030490.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *-* F4K1Y4_ARATH) Solyc02g030500.1 2 2 0 2 0 1 0 0 1 3 1 0 4 6 0 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G2YP10_CAPAN) Solyc02g030510.1 16 11 22 8 4 1 8 0 10 5 15 14 17 41 38 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G3BHE9_CAPCH) Solyc02g030520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030523.1 5 1 0 0 0 2 0 0 0 0 0 0 1 1 10 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic (AHRD V3.3 *-* A0A2G2ZW71_CAPAN) Solyc02g030525.1 0 1 2 0 0 0 1 0 1 1 0 1 0 0 0 SNF1-related protein kinase regulatory subunit beta-3 (AHRD V3.3 *-* A0A2G3A5M6_CAPAN) Solyc02g030527.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF1-related protein kinase regulatory subunit beta-3 (AHRD V3.3 *-* A0A2G2WMW8_CAPBA) Solyc02g030530.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *** F4K1Y4_ARATH) Solyc02g030540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ras GTPase-activating protein-binding protein 2-like isoform X2 (AHRD V3.3 *-* XP_010317134.1) Solyc02g030550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2G2WUM4_CAPBA) Solyc02g030560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030565.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP3-like (AHRD V3.3 --* XP_010317361.1) Solyc02g030580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ras GTPase-activating protein-binding protein 2-like isoform X2 (AHRD V3.3 *-* XP_010317134.1) Solyc02g030590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g030600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP3-like (AHRD V3.3 *** XP_010317361.1) Solyc02g150115.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g030610.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g030620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g030625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g030630.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g030633.1 0 0 9 0 0 2 2 0 0 0 0 0 0 1 1 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g030637.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g030640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP3-like (AHRD V3.3 *-* XP_010317361.1) Solyc02g030650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g030660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g031680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g031700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g031710.3 343 257 332 412 239 263 215 239 396 274 543 260 291 339 666 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *-* A0A2U1LW40_ARTAN) AT3G12920 Solyc02g031730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc02g031740.3 223 247 367 313 211 166 154 126 195 219 451 109 194 231 373 Phloem protein 2-like (AHRD V3.3 *** A0A200QPN3_9MAGN) AT1G10155 Solyc02g031750.3 31 14 31 31 8 7 13 5 2 8 6 3 13 11 35 Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1PTN1_ARTAN) Solyc02g031755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g031760.2 2 0 0 1 1 2 0 0 2 2 4 0 0 0 0 Unknown protein Solyc02g031770.4 186 253 253 269 303 301 339 289 248 156 254 249 297 356 360 ATP synthase mitochondrial F1 complex assembly factor 1-like (AHRD V3.3 *** A0A2I4G3K4_9ROSI) AT2G34050 Solyc02g031780.1 23 15 30 26 5 14 6 8 19 15 14 17 7 19 5 Unknown protein Solyc02g031790.3 264 151 286 142 27 46 62 40 152 186 304 85 464 374 197 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc02g031800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2K3L086_TRIPR) Solyc02g031810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8E178_CAPAN) Solyc02g031830.1 418 353 360 360 407 318 266 365 366 471 339 444 393 329 298 polyadenylate-binding protein 1-B-binding protein (AHRD V3.3 *** AT5G44860.2) AT4G19950 Solyc02g031840.3 1829 1044 783 903 842 957 852 992 944 1323 872 864 797 834 905 Potassium transporter (AHRD V3.3 *** A0A1U8FIL6_CAPAN) AT2G35060 Solyc02g031850.1 129 106 147 118 99 108 106 69 88 99 137 90 168 100 302 Protein kinase domain containing protein (AHRD V3.3 *-* A0A0U9HPK6_KLENI) Solyc02g031860.3 2026 2149 1420 1489 1696 1756 1531 2002 2616 2103 1057 1670 1980 2185 1715 MAP kinase kinase kinase 12 AT2G35050 Solyc02g031890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Potassium transporter (AHRD V3.3 *-* A0A328DWP9_9ASTE) Solyc02g031900.3 71 41 104 72 42 81 104 61 46 30 53 38 57 61 49 Protein kinase domain containing protein (AHRD V3.3 *-* A0A0U9HPK6_KLENI) Solyc02g031910.2 2400 2769 1904 2170 3022 2818 2805 3567 3677 3088 2060 2703 2676 2805 1911 PB1 domain-containing protein/Pkinase_Tyr domain-containing protein (AHRD V3.3 *** A0A1Q3BH41_CEPFO) AT2G35050 Solyc02g031920.4 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 pathogen-related protein-like (AHRD V3.3 *-* A0A2I4FK57_9ROSI) Solyc02g031930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g031940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pathogenesis-related family protein (AHRD V3.3 *-* AT1G78780.5) Solyc02g031950.3 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 pathogenesis-related family protein (AHRD V3.3 *** AT1G78780.5) AT1G78780 Solyc02g031960.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectate lyase (AHRD V3.3 *-* A0A2G3DIQ3_CAPCH) Solyc02g031970.1 880 1131 1425 941 1430 1308 1259 1392 1019 744 966 1067 1200 1229 1031 50S ribosomal protein L7/L12 (AHRD V3.3 *** A0A1U8GY39_CAPAN) AT1G70190 Solyc02g031980.3 309 127 148 149 129 155 145 139 130 203 168 136 108 157 204 urease accessory protein D AT2G35035 Solyc02g031985.1 5 0 17 8 11 12 14 3 6 4 1 5 7 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) ATMG00240 Solyc02g031990.1 389 103 58 45 0 8 2 7 33 87 73 34 103 81 18 VQ motif-containing protein 22 (AHRD V3.3 *** A0A2G2XD74_CAPBA) Solyc02g032000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *-* A0A2G2XL38_CAPBA) Solyc02g032010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032020.3 43 18 21 7 1 5 0 1 7 37 44 13 9 7 4 Unknown protein Solyc02g032030.1 9 5 12 4 4 14 13 10 11 2 2 1 0 0 0 Dirigent protein (AHRD V3.3 *** K4B5E9_SOLLC) Solyc02g032035.1 0 3 0 0 0 0 1 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc02g032040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** K4B5F0_SOLLC) Solyc02g032050.1 6 44 57 67 97 49 169 68 78 82 52 62 25 37 46 Dirigent protein (AHRD V3.3 *** K4B5F1_SOLLC) Solyc02g032060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *-* A0A072UMX7_MEDTR) Solyc02g032080.2 1 0 0 0 0 0 0 2 0 0 0 1 0 0 1 B3 DNA binding domain-containing protein (AHRD V3.3 --* A0A2U1MFQ9_ARTAN) Solyc02g032090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *-* A0A2U1LK87_ARTAN) Solyc02g032100.4 116 290 1685 1054 105 97 104 42 71 150 280 130 391 439 380 Zinc transporter protein (AHRD V3.3 *** A5BDR3_VITVI) AT3G12750 Solyc02g032120.3 2447 2406 1719 2124 2578 2315 2620 2711 1871 3067 1845 2599 2481 2461 1569 Zinc finger (C2H2 type) family protein (AHRD V3.3 *** A0A1P8ASM0_ARATH) AT1G30970 Solyc02g032130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP1-like (AHRD V3.3 *-* XP_025885537.1) Solyc02g032140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g032150.1 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 ninja-family protein AFP1-like (AHRD V3.3 *** XP_025885537.1) Solyc02g032160.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ninja-family protein AFP1-like (AHRD V3.3 *** XP_025885537.1) Solyc02g032170.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B-9 (AHRD V3.3 *** A0A1U8F2B7_CAPAN) Solyc02g032185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear factor Y, subunit B6 (AHRD V3.3 *** A0A2U1QBQ6_ARTAN) Solyc02g032190.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B (AHRD V3.3 *-* A0A2G2X323_CAPBA) Solyc02g032200.4 1612 1146 1610 1454 1035 1152 1372 785 1017 986 1707 820 1433 1476 2035 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3P0U8_TRIPR) Solyc02g032210.1 0 0 0 0 0 0 3 2 1 0 0 0 1 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A2K3KKH3_TRIPR) AT2G32645 Solyc02g032220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A2K3MDL6_TRIPR) AT2G32645 Solyc02g032230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3M4T9_TRIPR) Solyc02g032235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Resistance protein (AHRD V3.3 *-* A0A2K3MX15_TRIPR) Solyc02g032240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3PI90_TRIPR) Solyc02g032250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* A0A2U1MPJ7_ARTAN) Solyc02g032260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN) Solyc02g032270.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A2K3MDL6_TRIPR) AT2G32645 Solyc02g032290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *** A0A2K3KKH3_TRIPR) AT2G32645 Solyc02g032300.3 1363 1049 978 993 675 770 897 753 750 943 1002 771 1019 1073 1073 Enhancer of polycomb-like protein (AHRD V3.3 *** A0A2G3D2K3_CAPCH) AT1G79020 Solyc02g032310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcineurin B-like protein (AHRD V3.3 *** C3TRS0_MAIZE) Solyc02g032320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* J7H711_CAPAN) Solyc02g032330.3 575 929 879 834 1008 929 1051 900 723 781 738 985 724 817 837 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 (AHRD V3.3 *** HSDD3_ARATH) AT2G26260 Solyc02g032340.2 0 5 9 3 39 16 8 8 6 4 30 13 0 2 0 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *-* A0A2U1N0U6_ARTAN) Solyc02g032350.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032355.1 1 1 11 1 6 8 3 1 1 15 0 9 0 1 5 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *-* A0A2U1N0U6_ARTAN) Solyc02g032380.3 36 36 32 45 45 32 50 40 37 40 30 60 33 39 99 Nuclear pore complex protein NUP214 (AHRD V3.3 *-* A0A2U1PQW9_ARTAN) Solyc02g032410.3 501 280 130 585 153 154 327 286 145 439 281 255 184 223 107 Unknown protein Solyc02g032420.1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc02g032450.3 2142 1893 1514 1629 1286 1440 1709 1320 1285 1475 1559 1467 1489 1758 1575 Nuclear pore complex protein (AHRD V3.3 *-* A0A200QTL2_9MAGN) Solyc02g032480.3 192 185 101 72 128 95 128 182 212 162 53 139 105 132 76 Nuclear pore complex protein NUP214 (AHRD V3.3 *-* A0A2U1PQW9_ARTAN) Solyc02g032490.3 80 90 39 42 52 48 62 141 79 100 26 91 48 63 56 Nuclear pore complex protein (AHRD V3.3 *-* A0A200QTL2_9MAGN) Solyc02g032510.3 1272 1469 1482 1603 1844 1747 1605 1755 1345 1576 1415 1508 1657 1719 1190 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G3A585_CAPAN) AT4G08455 Solyc02g032520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Apyrase (AHRD V3.3 *-* A0A2G3AV88_CAPCH) Solyc02g032523.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032527.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Apyrase (AHRD V3.3 *** A0A2G2XFE6_CAPBA) Solyc02g032555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1P2G6_ARTAN) Solyc02g032560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Apyrase (AHRD V3.3 *** A0A2G3AV93_CAPCH) Solyc02g032570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Apyrase (AHRD V3.3 *-* A0A2G2XFE6_CAPBA) Solyc02g032580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Apyrase (AHRD V3.3 *-* A0A2G2XFE6_CAPBA) Solyc02g032585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *-* A0A2U1P2G6_ARTAN) Solyc02g032590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 U-box domain-containing protein 4 (AHRD V3.3 *-* A0A2G2XGT0_CAPBA) Solyc02g032600.1 0 0 1 0 3 1 1 0 0 0 0 0 0 0 1 transmembrane protein (AHRD V3.3 *** AT4G18540.2) Solyc02g032620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032630.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pumilio-like protein 1 (AHRD V3.3 *-* A0A2G2VZ82_CAPBA) Solyc02g032650.3 625 382 442 310 92 111 124 118 234 340 380 127 379 249 383 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3NUH8_TRIPR) Solyc02g032660.3 19 23 17 28 17 4 7 9 37 10 5 3 19 32 62 Protein DETOXIFICATION (AHRD V3.3 *** A0A328DGG9_9ASTE) Solyc02g032663.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc02g032667.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3D9Z8_CEPFO) Solyc02g032670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g032680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g032690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g032695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g032720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g032730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ras GTPase-activating protein-binding protein 2-like isoform X1 (AHRD V3.3 *-* XP_004233930.1) Solyc02g032740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ras GTPase-activating protein-binding protein 2-like isoform X2 (AHRD V3.3 --* XP_010317134.1) Solyc02g032780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032790.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *** F4K1Y4_ARATH) Solyc02g032800.1 123 63 49 76 160 138 112 95 122 113 130 82 60 61 216 Senescence regulator S40 (AHRD V3.3 *** A0A200QJC6_9MAGN) AT1G11700 Solyc02g032810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (AHRD V3.3 *-* ACCD_SOLTU) Solyc02g032820.3 4 0 1 7 5 0 1 2 4 8 0 2 3 4 8 Calcium-dependent protein kinase (AHRD V3.3 *** Q8RW36_SOLLC) Solyc02g032830.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4B5M7_SOLLC) Solyc02g032840.1 1 11 34 4 7 5 8 6 2 6 12 2 2 9 0 Unknown protein Solyc02g032845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g032850.3 590 387 472 417 316 285 276 249 476 528 464 346 771 535 549 Phytoalexin-deficient 4-1 protein (AHRD V3.3 *** Q2TNK3_SOLTU) AT3G52430 Solyc02g032860.3 318 421 1084 452 256 391 401 374 636 471 825 571 999 573 489 5'-adenylylsulfate reductase 1, chloroplastic (AHRD V3.3 *** A0A2G3D220_CAPCH) AT4G04610 Solyc02g032870.4 189 338 365 385 558 502 480 573 330 274 274 437 247 368 337 Endonuclease/exonuclease/phosphatase family protein (AHRD V3.3 *** A0A2U1LJZ6_ARTAN) AT1G11800 Solyc02g032910.3 0 0 0 2 2 2 0 0 2 0 0 3 0 0 0 glycine rich protein precursor (AHRD V3.3 *-* NP_001233996.1) Solyc02g032920.3 821 1297 949 772 928 1003 1042 1019 945 684 685 853 1264 1372 821 U3 small nucleolar RNA-associated protein 6 homolog (AHRD V3.3 *** A0A2I4H129_9ROSI) AT4G28200 Solyc02g032930.3 521 476 580 515 510 625 603 581 531 514 670 459 774 585 720 B-cell receptor-associated 31-like (AHRD V3.3 *** A0A200QH03_9MAGN) AT5G42570 Solyc02g032940.4 320 360 786 597 191 263 226 183 433 507 600 292 283 375 488 Aspartic proteinase (AHRD V3.3 *** A0A1U8FF23_CAPAN) AT1G11910 Solyc02g032950.3 1025 920 460 636 33 54 28 50 276 423 481 91 593 546 838 WRKY transcription factor 16 AT1G62300 Solyc02g032960.2 754 1409 838 914 994 1090 1092 1719 1373 768 558 926 754 1276 675 ATP-dependent zinc metalloprotease FtsH 2 (AHRD V3.3 *** A0A1J3JSZ2_NOCCA) AT3G04340 Solyc02g032970.4 293 515 580 492 411 604 610 463 474 211 387 272 405 557 528 ATP-dependent zinc metalloprotease FtsH 2 (AHRD V3.3 *-* A0A1J3GU49_NOCCA) Solyc02g032980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein At5g26805-like (AHRD V3.3 -** XP_015881022.1) Solyc02g032990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ras GTPase-activating protein-binding protein 2-like isoform X2 (AHRD V3.3 --* XP_010317134.1) Solyc02g033020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP3-like (AHRD V3.3 *-* XP_010317361.1) Solyc02g033030.3 140 120 230 167 44 96 66 127 144 147 187 157 119 128 153 Unknown protein Solyc02g033035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc02g033050.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT1G05490 Solyc02g033055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc02g033060.3 401 134 219 166 191 229 213 171 222 206 261 183 128 126 262 vacuolar acid trehalase (AHRD V3.3 *** AT3G10405.1) AT3G10405 Solyc02g033070.1 28 12 15 3 5 10 10 3 13 9 19 0 18 13 12 Protein MEF2BNB-like protein (AHRD V3.3 *** A0A1J3J2M0_NOCCA) AT2G39170 Solyc02g033080.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g033090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g033100.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1P2G6_ARTAN) Solyc02g033110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1P2G6_ARTAN) Solyc02g033120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1NTE5_ARTAN) Solyc02g036130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *-* A0A2U1NTE5_ARTAN) Solyc02g036140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A8MQN6_ARATH) Solyc02g036160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g036170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A8MQN6_ARATH) Solyc02g036180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stigma-specific Stig1 family protein (AHRD V3.3 *** A0A2U1PTF1_ARTAN) Solyc02g036185.1 0 1 1 0 1 2 2 0 1 0 0 0 0 0 0 RNA-directed DNA polymerase (AHRD V3.3 *-* A0A2I0VKV5_9ASPA) Solyc02g036190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g036200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A8MQN6_ARATH) Solyc02g036210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *-* A0A2U1NFB6_ARTAN) Solyc02g036215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *-* A8MQN6_ARATH) Solyc02g036220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stigma-specific Stig1 family protein (AHRD V3.3 *** A0A2U1PTF1_ARTAN) Solyc02g036230.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1NTE5_ARTAN) Solyc02g036240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stigma-specific Stig1 family protein (AHRD V3.3 *** A0A2U1PTF1_ARTAN) Solyc02g036250.1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *-* A0A2K3MVY8_TRIPR) Solyc02g036260.4 33 49 134 101 56 95 71 31 53 91 158 33 27 50 111 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *** A0A2U1NFB6_ARTAN) Solyc02g036270.4 180 194 174 162 138 174 167 162 225 151 141 177 161 184 121 Disease resistance protein (AHRD V3.3 *** A0A2U1P003_ARTAN) Solyc02g036280.3 380 249 342 302 272 273 262 259 315 268 374 196 310 298 305 Pvr4 (AHRD V3.3 *-* A0A1D5AHY8_CAPAN) Solyc02g036290.4 59 46 70 52 81 63 72 31 38 36 62 46 62 63 78 Malonyl-CoA decarboxylase family protein (AHRD V3.3 *-* A0A2U1QFC7_ARTAN) Solyc02g036300.3 35 20 25 41 11 22 22 29 24 15 52 14 30 28 58 Malonyl-CoA decarboxylase family protein (AHRD V3.3 *-* A0A2U1QFC7_ARTAN) Solyc02g036310.4 38 25 18 29 10 29 23 19 35 43 23 34 34 46 34 Malonyl-CoA decarboxylase family protein (AHRD V3.3 *-* A0A2U1QFC7_ARTAN) Solyc02g036320.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A2U8ZZC7_9GENT) Solyc02g036330.3 1802 1438 1065 1172 1208 1004 1140 1251 1239 1266 1331 1216 1493 1256 1228 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1PV42_ARTAN) AT4G04180 Solyc02g036350.3 2926 1436 2258 1547 477 359 315 452 2579 2921 3971 396 1677 1372 1682 1-aminocyclopropane-1-carboxylate oxidase EF501822 AT1G05010 Solyc02g036360.1 241 505 414 267 362 387 368 425 522 283 346 304 472 463 386 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *-* A0A1R7T3E1_ARATH) AT1G62390 Solyc02g036370.3 4558 1820 216 926 759 575 469 644 589 1948 377 498 586 474 1086 Protein REVEILLE 7-like (AHRD V3.3 *** A0A2G3A4J4_CAPAN) AT5G17300 Solyc02g036380.3 1401 584 672 595 523 482 521 491 500 839 588 519 615 597 867 Autophagy protein 5 (AHRD V3.3 *** A0A2G2XBD3_CAPBA) AT5G17290 Solyc02g036390.1 0 18 9 10 22 17 18 14 24 1 14 7 3 1 24 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *-* F4JVE8_ARATH) Solyc02g036430.2 31 36 67 54 40 47 36 35 39 63 119 14 37 50 53 NAC domain-containing protein 78 (AHRD V3.3 *** A0A2G3D245_CAPCH) AT1G65910 Solyc02g036440.3 47 7 7 1 2 2 0 0 2 11 3 4 0 7 1 ALA-interacting subunit (AHRD V3.3 *** A0A1U8FRI2_CAPAN) Solyc02g036450.3 545 559 759 722 743 756 823 665 600 722 815 675 745 569 628 RAB GTPase (AHRD V3.3 *** A0A0P0YPT5_MARPO) Solyc02g036460.3 450 620 496 625 867 885 670 705 994 474 664 680 556 686 571 rho GTPase-activating protein (AHRD V3.3 *-* AT5G37010.1) Solyc02g036470.4 1280 601 652 693 525 482 518 419 532 780 799 685 554 648 957 WAT1-related protein, chloroplastic (AHRD V3.3 *** A0A1U8FQ16_CAPAN) AT3G02690 Solyc02g036480.1 414 128 28 47 1 3 5 3 137 82 81 30 82 312 95 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9SLI0_ARATH) AT5G36970 Solyc02g037490.1 5 36 53 49 46 67 44 60 63 12 39 55 28 62 24 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200RCS7_9MAGN) Solyc02g037500.1 0 4 8 0 0 4 3 1 13 8 4 10 11 4 21 Unknown protein Solyc02g037510.3 303 195 175 230 238 267 316 252 284 307 236 239 208 230 282 Cationic amino acid transporter 2, vacuolar (AHRD V3.3 *** A0A2G3A4Q3_CAPAN) Solyc02g037530.3 2570 6514 3660 4144 12108 10924 13270 13678 6561 4394 4254 5030 5013 5132 3671 auxin response factor 8B AT5G37020 Solyc02g037540.3 23 2 7 0 0 0 1 0 2 5 8 0 7 8 0 Disease resistance protein (AHRD V3.3 *** A0A2U1P5P8_ARTAN) AT1G12210 Solyc02g037545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3DEI6_NOCCA) Solyc02g037550.3 24 169 8 140 192 94 136 132 368 200 165 187 105 24 122 Auxin efflux carrier (AHRD V3.3 *** A0A2U1MR93_ARTAN) Solyc02g037555.1 0 0 6 0 7 2 2 3 4 7 6 1 2 2 0 Unknown protein Solyc02g037590.3 731 336 321 526 203 303 323 267 248 615 245 506 241 361 179 Unknown protein Solyc02g150116.1 26 34 12 24 5 2 10 5 13 15 23 20 6 16 9 Unknown protein Solyc02g038640.3 95 25 60 42 47 47 38 34 72 41 62 58 28 70 83 Replication protein A subunit (AHRD V3.3 *-* A0A176W2E5_MARPO) Solyc02g038650.1 0 0 0 3 5 0 0 1 0 0 0 0 0 0 0 Tetratricopeptide repeat protein 5 (AHRD V3.3 *** A0A2U1N5G0_ARTAN) Solyc02g038660.3 2 2 0 0 0 0 0 2 0 0 0 0 0 0 0 Tetratricopeptide repeat protein 5 (AHRD V3.3 *** A0A2U1N5G0_ARTAN) Solyc02g038670.3 0 0 1 0 1 6 0 8 1 0 6 9 0 5 7 Tetratricopeptide repeat protein 5 (AHRD V3.3 *** A0A2U1N5G0_ARTAN) Solyc02g038680.1 0 0 6 2 0 3 1 0 1 0 9 2 0 1 0 Tetratricopeptide repeat protein 5 (AHRD V3.3 *** A0A2U1N5G0_ARTAN) Solyc02g038690.1 73 893 553 653 974 1066 868 1045 436 356 682 851 218 573 273 Histone H2B (AHRD V3.3 *** A0A078K3Z1_BRANA) Solyc02g038700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide repeat protein 5 (AHRD V3.3 *-* A0A2U1PT40_ARTAN) Solyc02g038705.1 0 0 0 7 0 5 0 0 0 0 0 0 1 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc02g038720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acyl carrier protein (AHRD V3.3 *** A0A2U1L3I2_ARTAN) Solyc02g038723.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) ATMG00240 Solyc02g038727.1 2 0 17 6 10 13 16 9 4 6 21 9 5 1 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4EGG2_9ROSI) Solyc02g038740.4 569 375 415 298 320 297 244 403 227 485 408 327 187 311 453 3-hydroxy-3-methylglutaryl coenzyme A reductase (AHRD V3.3 *** A0A2G2XB84_CAPBA) Solyc02g038750.3 530 666 599 540 383 457 465 421 426 303 418 402 1033 890 557 WD repeat-containing protein 55-like (AHRD V3.3 *** A0A2K3P0N4_TRIPR) AT2G34260 Solyc02g038760.4 841 986 769 980 816 993 977 978 811 819 832 894 1254 1032 1020 AT-hook motif nuclear-localized protein 1 (AHRD V3.3 *** A0A2G3A4Q2_CAPAN) Solyc02g038770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* Q9LTU8_ARATH) AT5G54990 Solyc02g038790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 6 (AHRD V3.3 *-* A0A1J3JA15_NOCCA) Solyc02g038800.1 76 222 201 129 197 229 249 223 238 190 234 152 160 169 141 Plant intracellular Ras-group-related LRR protein (AHRD V3.3 *** A0A2R6RJA8_ACTCH) AT4G35470 Solyc02g038801.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 sentrin-specific protease 1-like (AHRD V3.3 -** XP_022861117.1) Solyc02g038802.1 0 0 0 0 0 1 2 1 0 0 2 0 2 0 0 Unknown protein Solyc02g038803.1 1458 1745 1665 1606 1679 1606 1436 1941 2162 2261 1470 2090 2335 2020 1281 Eukaryotic translation initiation factor 6 (AHRD V3.3 *** A0A2G3A551_CAPAN) AT3G55620 Solyc02g038804.1 1243 1253 1274 1233 1800 1572 1449 2049 1401 1150 1099 1583 1262 1613 973 Peptidase_C48 domain-containing protein (AHRD V3.3 *-* A0A1Q3BJV2_CEPFO) Solyc02g038805.1 53 44 30 91 102 96 97 106 59 71 69 106 43 76 60 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LB75_ARTAN) Solyc02g038806.1 294 304 562 311 416 517 426 403 321 315 414 274 317 299 279 MLO-like protein (AHRD V3.3 *** A0A1C9A1F5_SOLLC) AT5G65970 Solyc02g038807.1 27 60 48 35 23 42 43 25 31 16 10 49 67 60 30 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1LH09_ARTAN) AT3G51470 Solyc02g038808.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4I629_ARATH) Solyc02g038809.1 3 0 3 2 6 8 3 2 1 0 0 3 1 0 0 asparagine-rich protein-like (AHRD V3.3 *-* XP_020397117.1) Solyc02g038810.1 74 38 154 77 118 244 139 133 6 61 33 25 100 11 75 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc02g038811.1 31 45 30 56 28 22 18 29 22 25 16 18 45 38 71 Amino acid transporter (AHRD V3.3 *** A0A200PYH9_9MAGN) AT4G38250 Solyc02g038812.1 742 970 908 975 1010 1026 1033 1053 1064 816 880 769 980 1156 1009 Calcium-binding EF hand family protein (AHRD V3.3 *** A0A1P8APZ6_ARATH) AT1G21630 Solyc02g038813.1 389 316 540 451 345 353 365 280 441 355 532 253 400 426 489 Protein kinase - like protein (AHRD V3.3 *** O81783_ARATH) AT2G17530 Solyc02g038814.1 170 246 301 319 308 326 336 307 237 239 381 290 246 262 254 Phosphatidylinositol N-acetylglucosaminyltransferase subunit H (AHRD V3.3 *** A0A1J3FSW3_NOCCA) AT4G35530 Solyc02g038815.1 46 84 91 86 118 136 165 114 53 38 80 80 126 118 68 tail-anchored protein insertion receptor WRB-like protein (AHRD V3.3 *** AT4G16444.1) AT4G16444 Solyc02g038816.1 2162 1744 2002 1524 1794 1802 1784 1415 1337 1254 1743 1507 1610 1620 1936 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4JZ11_ARATH) AT5G66010 Solyc02g038817.1 389 367 514 301 257 277 309 262 359 372 440 295 554 354 277 Protein kinase domain (AHRD V3.3 *-* A0A200PQX9_9MAGN) Solyc02g038818.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QHH9_9MAGN) AT5G02790 Solyc02g038819.1 278 423 244 265 317 320 347 375 366 226 255 305 473 415 359 Phosphoinositide phosphatase family protein (AHRD V3.3 *** A0A2U1LC37_ARTAN) AT5G66020 Solyc02g038820.1 2 0 0 0 0 0 0 0 3 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A2G3CHZ3_CAPCH) Solyc02g038825.1 12 5 30 6 4 9 11 4 10 5 11 10 9 7 26 Unknown protein Solyc02g060560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g060570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein DSK2b (AHRD V3.3 *** A0A2G3D7C7_CAPCH) Solyc02g060580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein DSK2b (AHRD V3.3 *-* A0A2G3D7C7_CAPCH) Solyc02g060585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin domain-containing protein DSK2b-like (AHRD V3.3 --* XP_025884879.1) Solyc02g060590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein (AHRD V3.3 *-* A0A1Q3CSA3_CEPFO) Solyc02g060595.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin domain-containing protein DSK2b-like (AHRD V3.3 *-* XP_025884879.1) Solyc02g060600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein (AHRD V3.3 *** A0A1Q3CSA3_CEPFO) Solyc02g060605.1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Cyclin (AHRD V3.3 *** A0A200PQW1_9MAGN) Solyc02g061600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g061605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VDL0_9ASPA) ATMG00810 Solyc02g061610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein DSK2b (AHRD V3.3 *** A0A2G3D7C7_CAPCH) Solyc02g061620.2 0 0 0 1 0 2 0 0 0 0 0 1 0 0 0 Phenylalanyl-tRNA synthetase (AHRD V3.3 *-* A0A2U1MCM3_ARTAN) Solyc02g061630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g061640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein (AHRD V3.3 *-* A0A1Q3CSA3_CEPFO) Solyc02g061650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cyclinB2_1 Solyc02g061660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g061665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin domain-containing protein DSK2b-like (AHRD V3.3 *-* XP_025884879.1) Solyc02g061670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein DSK2b (AHRD V3.3 *** A0A2G3D7C7_CAPCH) Solyc02g061680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein DSK2b (AHRD V3.3 *** A0A2G3D7C7_CAPCH) Solyc02g061690.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cyclinB2_2 Solyc02g061700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g061710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein DSK2b (AHRD V3.3 *-* A0A2G3D7C7_CAPCH) Solyc02g061720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin domain-containing protein (AHRD V3.3 *** A0A1Q3CSA3_CEPFO) Solyc02g061730.2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Cyclin (AHRD V3.3 *-* A0A200PQW1_9MAGN) Solyc02g061740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AMP-dependent synthetase/ligase (AHRD V3.3 *-* A0A200QNJ1_9MAGN) Solyc02g061750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AMP-dependent synthetase/ligase (AHRD V3.3 *-* A0A200QNJ1_9MAGN) Solyc02g061760.4 350 806 412 663 1180 1181 1302 1242 743 1032 385 866 627 572 334 Protein DETOXIFICATION (AHRD V3.3 *** A0A328DP91_9ASTE) Solyc02g061770.4 58 69 22 15 0 7 4 3 38 129 8 13 615 111 23 chitinase 2 Solyc02g061780.3 38 3 3 2 0 0 0 0 0 0 0 0 16 27 4 NAC domain (AHRD V3.3 *** A0A200QLB5_9MAGN) Solyc02g061790.4 142 219 292 238 340 295 316 313 199 136 264 309 329 218 143 Activated RNA polymerase II transcriptional coactivator p15 (AHRD V3.3 *** A0A2G2XC29_CAPBA) AT5G09250 Solyc02g061800.2 3 3 0 5 1 1 1 0 0 0 9 0 5 1 10 Peptidyl-prolyl cis-trans isomerase-like protein (AHRD V3.3 *** W7U8L5_9STRA) Solyc02g061810.3 350 374 452 502 495 590 563 468 361 431 465 586 343 412 341 S-acyltransferase (AHRD V3.3 *** A0A1U8FFD7_CAPAN) AT3G51390 Solyc02g061820.4 365 422 331 481 420 374 378 412 461 464 327 460 440 520 297 Ankyrin repeat (AHRD V3.3 *** A0A200QEF9_9MAGN) AT5G66055 Solyc02g061825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CLP4_CEPFO) Solyc02g061840.3 1238 1143 1212 1188 1028 1071 1202 1042 756 865 1180 998 1429 1116 1195 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4JNU2_ARATH) Solyc02g061850.4 20 46 54 60 45 69 63 58 33 37 64 22 34 34 59 Phospholipase D (AHRD V3.3 *** K4B675_SOLLC) AT4G35790 Solyc02g061860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g061870.1 0 0 1 1 0 0 0 0 1 0 2 0 4 0 0 Senescence-specific cysteine protease SAG39 (AHRD V3.3 *-* A0A2G3CBW6_CAPCH) Solyc02g061880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g061890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g061900.1 3 5 21 13 4 8 2 9 0 10 6 3 5 0 32 Senescence-specific cysteine protease SAG39 (AHRD V3.3 *-* A0A2G3CBW6_CAPCH) Solyc02g061910.1 0 8 13 0 1 3 2 2 5 1 14 4 0 2 3 Senescence-specific cysteine protease SAG39 (AHRD V3.3 *-* A0A2G3CBW6_CAPCH) Solyc02g061920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MSD0_TRIPR) AT5G48050 Solyc02g061940.4 125 141 188 223 148 208 185 149 164 149 218 180 114 142 206 Myb/SANT-like domain (AHRD V3.3 *** A0A200QA43_9MAGN) AT3G11310 Solyc02g061950.4 176 113 143 75 102 129 112 124 108 103 98 99 139 150 68 Methyltransferase family-like protein (AHRD V3.3 *** A0A2K3PHE1_TRIPR) AT1G63855 Solyc02g061960.3 3775 3278 2632 3019 3095 3014 2827 3152 2798 3071 2673 3160 2568 2821 3236 la-related protein 1C-like (AHRD V3.3 *** A0A2I4FDA4_9ROSI) AT4G35890 Solyc02g061980.3 2025 2001 1482 1732 1482 1773 1809 1760 1499 1513 1501 1561 1938 1905 1604 la-related protein 1C-like (AHRD V3.3 *** A0A2I4FDA4_9ROSI) AT4G35890 Solyc02g061990.3 2162 1370 2375 2115 1353 1496 1102 1476 1859 2674 1507 1790 1676 1197 1057 BZIP transcription factor FD (AHRD V3.3 *** A0A2U1NCD2_ARTAN) Solyc02g062000.4 1777 1116 1124 1592 770 667 788 750 867 1375 802 760 1084 1159 942 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A (AHRD V3.3 *** A0A2I0X875_9ASPA) Solyc02g062010.1 177 120 140 144 156 181 172 144 81 105 155 148 88 85 77 Unknown protein Solyc02g062015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g062020.3 430 713 684 701 803 857 735 730 512 444 515 522 607 529 516 Rac-like GTP binding protein (AHRD V3.3 *** Q9S821_PHYPA) AT2G17800 Solyc02g062030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** Q9M7M3_CAPAN) Solyc02g062040.3 541 314 398 347 207 254 220 168 233 421 450 304 373 318 561 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1ML59_ARTAN) AT4G35840 Solyc02g062045.1 0 1 5 0 8 8 9 4 0 3 19 2 0 2 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc02g062050.3 11 11 18 29 49 42 57 44 11 11 9 18 2 10 28 Senescence/dehydration-associated protein-like protein (AHRD V3.3 *-* A0A1P8B3G4_ARATH) Solyc02g062060.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Senescence-specific cysteine protease SAG39 (AHRD V3.3 *-* A0A2G3CBW6_CAPCH) Solyc02g062070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein 96-like (AHRD V3.3 *-* XP_004233985.1) Solyc02g062080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein 96-like (AHRD V3.3 *-* XP_004233985.1) Solyc02g062090.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Senescence-specific cysteine protease SAG39 (AHRD V3.3 *-* A0A2G3CBW6_CAPCH) Solyc02g062100.4 412 553 900 616 573 599 509 753 509 1130 597 608 744 647 351 Senescence/dehydration-associated protein-like protein (AHRD V3.3 *** A0A1P8AYB1_ARATH) AT2G17840 Solyc02g062110.4 693 618 541 592 613 594 563 666 767 791 510 712 831 782 679 Vacuolar fusion protein CCZ1-like protein (AHRD V3.3 *** A0A1J3IFZ9_NOCCA) AT1G80910 Solyc02g062120.3 337 132 228 173 91 98 173 85 121 119 147 91 144 152 302 Membrane fusion protein Use1 (AHRD V3.3 *-* A0A1P8AP56_ARATH) Solyc02g062130.4 221 162 234 159 178 168 208 189 240 160 171 131 245 182 235 Ferredoxin--NADP reductase, chloroplastic (AHRD V3.3 *** K4B6A3_SOLLC) AT5G66190 Solyc02g062140.2 1042 543 743 536 103 114 125 89 501 881 791 322 1051 591 657 Armadillo repeat only 1 (AHRD V3.3 *** Q9SW41_ARATH) Solyc02g062150.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G3A4H7_CAPAN) Solyc02g062160.1 2 13 0 8 0 1 6 2 6 9 0 0 14 2 5 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G2XG76_CAPBA) AT2G17880 Solyc02g062170.3 20 211 241 325 502 741 611 571 248 104 228 376 22 193 137 Chalcone-flavanone isomerase family protein (AHRD V3.3 *-* AT5G66230.1) Solyc02g062180.3 94 94 75 129 162 193 181 186 111 86 138 136 130 138 162 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1N614_ARTAN) Solyc02g062190.2 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 Tryptophan aminotransferase-related protein 4 (AHRD V3.3 *** A0A2G2W482_CAPBA) AT1G34060 Solyc02g062195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) Solyc02g062200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide repeat protein 5-like (AHRD V3.3 *-* A0A2K3NNT8_TRIPR) Solyc02g062210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain (AHRD V3.3 *-* A0A200QRX8_9MAGN) Solyc02g062220.2 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 Myb/SANT-like domain (AHRD V3.3 *-* A0A200QQD5_9MAGN) Solyc02g062230.1 32 27 14 38 20 26 10 14 19 32 2 16 24 14 72 Small auxin up-regulated RNA32 Solyc02g062240.3 531 1116 964 684 1177 1066 1009 1171 720 480 728 905 1193 1053 820 Small nuclear ribonucleoprotein Sm D3 (AHRD V3.3 *** A0A1U8FJ77_CAPAN) AT1G20580 Solyc02g062250.3 1190 1668 1719 1398 1748 1994 1822 1847 1481 1141 1467 1373 2269 1686 1401 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A1U8FHR4_CAPAN) AT2G18040 Solyc02g062255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic (AHRD V3.3 --* A0A2G2ZW71_CAPAN) Solyc02g062290.2 2678 2907 2016 2001 2178 2151 2061 2112 2861 1952 1853 2274 2568 3002 2394 RNA binding protein (AHRD V3.3 *-* A0A2K3MUE2_TRIPR) Solyc02g062280.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc02g062300.3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BURP domain-containing protein (AHRD V3.3 *** A0A2U1M493_ARTAN) Solyc02g062310.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 BURP domain-containing protein (AHRD V3.3 *-* A0A2U1NKA9_ARTAN) Solyc02g062313.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BURP domain protein (AHRD V3.3 *** A0A2K3PM47_TRIPR) Solyc02g062317.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BURP domain protein (AHRD V3.3 *** A0A2K3PM47_TRIPR) Solyc02g062320.3 1 6 38 15 25 21 14 22 32 18 29 17 3 6 14 BURP domain protein (AHRD V3.3 *** A0A2K3PM47_TRIPR) Solyc02g062330.3 14 18 49 49 64 63 46 51 51 11 33 43 23 37 59 Kinesin-like protein (AHRD V3.3 *** A0A2G2XB42_CAPBA) AT3G51150 Solyc02g062340.3 2183 5056 3003 3245 6874 5347 5781 7120 4309 3818 3432 3054 2627 2027 4320 Fructose-bisphosphate aldolase (AHRD V3.3 *** Q9SXX4_NICPA) AT4G38970 Solyc02g062350.3 139 316 252 235 356 358 347 337 275 217 249 293 305 377 248 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic (AHRD V3.3 *** A0A2I4ERI8_9ROSI) AT3G51140 Solyc02g062370.4 1952 1684 2433 1649 1324 1659 1715 1360 1881 1559 2704 1353 1459 2024 2579 Zinc finger CCCH domain-containing protein 19 (AHRD V3.3 *** A0A2G2XGC4_CAPBA) AT3G51120 Solyc02g062380.3 89 153 207 187 183 176 154 152 112 89 114 177 294 234 212 GATA transcription factor (AHRD V3.3 *** K4B6C7_SOLLC) Solyc02g062390.3 25 15 3 11 1 3 0 0 0 5 3 0 8 18 83 abscisic acid and environmental stress-inducible protein TAS14 (AHRD V3.3 *-* A0A1U8FJ72_CAPAN) Solyc02g062400.3 88 118 120 152 115 134 145 97 123 81 180 80 108 72 60 Expression of terpenoids 1 (AHRD V3.3 *** K4B6C9_SOLLC) AT3G51060 Solyc02g062410.2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 Protein BOBBER 1 (AHRD V3.3 *** A0A2G3D107_CAPCH) Solyc02g062420.4 197 204 186 191 229 218 266 230 183 199 210 234 175 215 147 green ripe-like 2 AT3G51040 Solyc02g062430.3 389 303 467 512 356 435 429 402 414 364 435 441 432 422 476 D-2-hydroxyglutarate dehydrogenase, mitochondrial (AHRD V3.3 *** A0A2G2XBI2_CAPBA) AT4G36400 Solyc02g062435.1 4 0 0 2 0 0 1 0 2 2 0 0 0 1 9 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc02g062460.4 1944 1963 1748 1136 694 672 643 581 1518 1533 850 1239 1715 1505 543 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) Solyc02g062490.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) Solyc02g062500.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) Solyc02g062505.1 0 1 0 0 0 0 4 0 0 0 0 0 1 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc02g062510.3 1 28 2 27 14 36 31 13 36 5 31 31 24 28 24 Peroxidase (AHRD V3.3 *** K4B6D9_SOLLC) AT5G66390 Solyc02g062520.3 460 438 326 517 364 460 342 375 363 361 416 405 526 446 312 Pseudouridine synthase (AHRD V3.3 *** A0A200QI62_9MAGN) AT3G52260 Solyc02g062530.3 481 893 634 605 809 758 829 795 647 486 507 653 1264 1005 629 thiamine-phosphate synthase (AHRD V3.3 *-* AT5G49410.2) AT5G49410 Solyc02g062535.1 4 0 0 0 0 0 0 1 2 3 0 0 0 2 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc02g062540.3 209 253 362 280 309 274 364 300 288 205 267 296 288 286 459 Thioredoxin domain-containing protein (AHRD V3.3 *** A0A1Q3D5L0_CEPFO) AT5G66410 Solyc02g062550.3 112 88 151 108 82 112 117 95 81 107 232 60 74 100 152 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NGS8_ARTAN) AT3G50930 Solyc02g062560.3 383 588 567 559 665 637 783 733 657 457 554 712 625 664 525 Tobacco mosaic virus resistance-1 AT5G66420 Solyc02g062565.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc02g062570.4 128 122 177 113 140 147 137 96 83 105 115 108 106 114 103 Phosphatidic acid phosphatase (AHRD V3.3 *** E5F729_9BRAS) AT5G66450 Solyc02g062580.3 134 72 98 115 87 99 90 131 65 137 60 99 69 126 99 Lipid phosphate phosphatase epsilon 2, chloroplastic (AHRD V3.3 *** A0A2G2XB00_CAPBA) AT5G66450 Solyc02g062590.3 41 12 108 59 0 0 0 6 32 5 71 8 12 104 298 Hexosyltransferase (AHRD V3.3 *** A0A2G2XBE9_CAPBA) Solyc02g062600.3 476 1408 1958 1886 2311 2409 2477 1659 1112 1054 1909 1267 1776 1750 2512 GAMMA carbonic anhydrase (AHRD V3.3 *** G5DWW7_SILLA) AT1G19580 Solyc02g062610.3 159 448 203 362 420 372 387 439 363 245 161 246 264 183 276 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** O23227_ARATH) AT4G36530 Solyc02g062615.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc02g062620.3 1352 1430 1298 1426 2036 2038 1958 1948 1489 1520 1159 1547 1548 1380 1192 Nuclear cap-binding protein subunit 2 (AHRD V3.3 *** B8YFW2_SOLTU) AT5G44200 Solyc02g062630.1 34 42 21 33 23 22 44 25 30 27 28 37 28 47 50 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A498_CAPAN) AT1G71420 Solyc02g062640.4 992 506 535 585 525 600 585 489 500 658 525 413 436 419 550 Phosphopantetheine adenylyltransferase (AHRD V3.3 *** A0A2G2WHT8_CAPBA) AT2G18250 Solyc02g062650.3 1 23 18 15 10 22 8 5 6 7 21 2 0 16 6 Laccase (AHRD V3.3 *** K4B6F3_SOLLC) Solyc02g062660.2 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 Laccase (AHRD V3.3 *-* M1B968_SOLTU) Solyc02g062670.3 291 374 403 475 544 635 612 547 468 441 426 593 409 386 440 Tubby-like F-box protein (AHRD V3.3 *** A0A2G3D7T8_CAPCH) AT2G18280 Solyc02g062680.3 998 978 1541 1294 1361 1542 1406 947 835 842 1554 1008 1122 1249 1611 Anaphase-promoting complex subunit 10 (AHRD V3.3 *** A0A2G3D1X5_CAPCH) AT2G18290 Solyc02g062690.3 1367 1526 1133 1486 1612 1554 1582 986 1745 1611 2811 750 1090 916 793 bHLH transcription factor 012 AT4G36540 Solyc02g062700.3 565 1362 952 718 692 764 833 700 741 366 704 707 1737 1435 1001 ATPase family AAA domain-containing protein 3-like (AHRD V3.3 *** A0A2I4E883_9ROSI) AT2G18330 Solyc02g062710.1 69 42 36 60 12 18 9 14 33 4 25 16 47 49 170 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2K3MRI0_TRIPR) Solyc02g062720.4 1436 1377 917 1643 1948 1567 1719 2271 1341 2079 1243 1684 1412 1283 742 DNA-3-methyladenine glycosylase 1-like (AHRD V3.3 *** A0A2I4EQE9_9ROSI) Solyc02g062725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LG19_TRIPR) Solyc02g062740.3 663 721 645 887 1077 1135 1127 1264 1002 873 735 1071 745 785 708 cytosine-5 DNA methyltransferase5 AT5G15380 Solyc02g062750.4 0 0 0 0 0 0 0 0 0 3 0 1 2 0 0 sugar facilitator protein 9 Solyc02g062760.4 39 178 160 147 340 322 317 323 249 174 257 165 251 227 161 GATA transcription factor 18-like (AHRD V3.3 *** A0A2I4G7Z6_9ROSI) AT3G50870 Solyc02g062770.2 4 3 6 7 0 0 0 0 2 4 0 3 4 3 1 late embryogenesis abundant protein (AHRD V3.3 *** AT5G66780.1) AT5G66780 Solyc02g062780.4 484 1027 1176 896 1553 1618 1646 1722 1127 924 758 1407 864 1234 634 ATP-dependent DNA helicase DDM1 (AHRD V3.3 *** A0A2G3D1Z5_CAPCH) AT5G66750 Solyc02g062790.3 55 35 53 97 45 47 70 25 23 50 44 52 63 45 35 Proline-rich receptor-like protein kinase PERK7 (AHRD V3.3 *** A0A2G3A4A7_CAPAN) AT4G34440 Solyc02g062800.2 3069 1614 1488 1507 770 909 801 847 964 2435 1677 979 2991 1618 1524 Ribosome biogenesis protein BMS1-like protein (AHRD V3.3 *-* A0A2G2W7A2_CAPBA) Solyc02g062810.4 658 781 692 716 811 802 839 726 745 565 691 703 895 882 714 Signal recognition particle subunit SRP68 (AHRD V3.3 *** A0A2G2X690_CAPBA) AT5G61970 Solyc02g062813.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase 2D (AHRD V3.3 *-* XP_004240029.1) Solyc02g062815.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription initiation factor TFIID subunit (AHRD V3.3 *-* AT5G65540.1) Solyc02g062817.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g062830.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Signal recognition particle subunit SRP68 (AHRD V3.3 *-* A0A2G3CUH8_CAPCH) Solyc02g062840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Signal recognition particle subunit SRP68 (AHRD V3.3 *-* A0A1U8G8F6_CAPAN) Solyc02g062850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polyol transporter 5 (AHRD V3.3 *-* A0A2G2XB31_CAPBA) Solyc02g062860.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 polyol monosaccharide transporter 6 AT4G36670 Solyc02g062870.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Polyol monosaccharide transporter 7 AT4G36670 Solyc02g062880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein REM14 isoform X2 (AHRD V3.3 *-* XP_010324528.1) Solyc02g062890.3 10 3 0 12 0 0 2 1 1 2 7 0 9 26 27 polyol monosaccharide transporter 5 AT4G36670 Solyc02g062910.3 707 1187 698 739 902 649 646 826 623 578 597 797 1327 1029 532 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3A487_CAPAN) AT4G36680 Solyc02g062915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc02g062920.3 3425 2457 1704 1868 1911 1944 2040 2091 2027 1814 1717 1971 2110 2389 2007 U2 snRNP auxiliary factor large subunit (AHRD V3.3 *** A0A2G3AAC4_CAPAN) AT1G60900 Solyc02g062940.3 1501 1185 1279 1184 1159 1335 1298 1223 1079 1358 1296 1109 1114 1109 1247 Zinc finger protein (AHRD V3.3 *-* A0A200Q257_9MAGN) Solyc02g062950.3 2298 1095 884 823 833 800 683 874 819 1320 1209 882 793 790 1376 G-box binding AT4G36730 Solyc02g062953.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) Solyc02g062957.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MA39_TRIPR) Solyc02g062960.4 1346 365 166 259 37 59 57 38 640 1116 780 304 155 217 68 Homeobox-leucine zipper protein HOX14 (AHRD V3.3 *** A0A1U8FQP7_CAPAN) AT4G36740 Solyc02g150123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g062970.3 6908 3504 2170 2646 1845 1576 1683 1844 3193 3634 2290 2623 3177 2801 3126 Xaa-Pro aminopeptidase 2 AT4G36760 Solyc02g062990.1 28 162 37 111 277 240 255 211 209 117 127 165 95 84 77 Glycosyltransferase (AHRD V3.3 *-* A0A2I4ENI5_9ROSI) Solyc02g063000.4 39 253 2 43 107 120 107 121 256 102 0 96 101 1 8 Glycosyltransferase (AHRD V3.3 *** A0A2I4ENI5_9ROSI) AT2G18570 Solyc02g063010.3 2924 3733 4476 6816 5295 4393 4932 4944 3786 7127 5626 4551 3380 3200 3694 BES1/BZR1-like protein (AHRD V3.3 *** A0A2U1KKL8_ARTAN) Solyc02g063020.3 261 124 219 84 23 17 13 7 126 288 313 85 173 100 78 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1P386_ARTAN) AT4G36790 Solyc02g063030.4 511 1407 1427 1176 3364 3384 3282 2590 2047 1103 2728 1751 1076 1077 834 Mental retardation GTPase activating protein (AHRD V3.3 *** A0A1I9LSH4_ARATH) AT5G16030 Solyc02g063050.3 1503 1139 1082 984 842 834 845 911 1006 1018 821 881 1096 1083 742 hypothetical protein (AHRD V3.3 *** AT5G23490.1) AT5G23490 Solyc02g063060.4 472 1364 1032 971 1255 1430 1426 1702 1198 828 583 1349 936 1332 618 Zinc-finger domain of monoamine-oxidase A repressor R1 (AHRD V3.3 *** A0A2U1N5J3_ARTAN) AT5G38690 Solyc02g063070.3 4143 3879 3247 2824 3152 3029 2876 3218 2636 3107 2523 2668 4856 3808 3460 tft4 AT5G38480 Solyc02g063075.1 479 407 356 275 409 401 366 341 300 387 420 424 441 380 405 Target SNARE coiled-coil-like domain-containing protein (AHRD V3.3 *** A0A2U1KSY6_ARTAN) AT4G14600 Solyc02g063080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic (AHRD V3.3 *-* A0A2R2UJ57_9ASTR) Solyc02g063085.1 224 454 523 429 524 695 666 373 319 209 447 339 438 435 539 COX assembly mitochondrial protein (AHRD V3.3 *** A0A2G3D1U1_CAPCH) AT5G16060 Solyc02g063090.3 1394 2099 1156 1019 1360 1224 1218 1377 1261 948 947 1149 2272 1856 1195 T-complex protein 1 subunit zeta (AHRD V3.3 *** A0A2G3D7N6_CAPCH) AT3G02530 Solyc02g063100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g063110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g063120.1 5 16 12 34 52 45 69 58 34 20 28 31 9 20 25 Unknown protein Solyc02g063130.4 9695 5932 3789 4150 4598 3990 3750 5572 5572 5392 3908 5407 6084 4708 4059 RAD23 protein (AHRD V3.3 *** Q9STA6_SOLLC) Solyc02g063133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Rad23 UV excision repair protein family (AHRD V3.3 *-* F4JD59_ARATH) Solyc02g063137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc02g063140.4 90 147 245 188 134 181 96 137 182 167 291 233 187 243 111 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G3D1W0_CAPCH) Solyc02g063150.3 2237 5506 4887 4683 5529 6139 5601 4595 6269 4563 4777 4313 3829 2036 4788 RuBP carboxylase small subunit AT5G38430 Solyc02g063160.4 108 314 354 389 432 473 503 382 376 259 278 310 434 354 323 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B9I4_ARATH) AT5G16120 Solyc02g063170.3 54 56 76 116 26 22 16 16 50 70 67 22 59 24 60 Abscisic acid (Aba)-deficient 4 (AHRD V3.3 *-* A0A1P8AQ81_ARATH) AT1G67080 Solyc02g063180.4 58 121 166 148 263 326 288 178 166 72 227 179 113 123 179 UDP-N-acetylenolpyruvoylglucosamine reductase (AHRD V3.3 *-* A0A200Q3E8_9MAGN) Solyc02g063190.2 8 32 23 38 24 36 34 31 42 23 14 29 10 33 6 UDP-N-acetylenolpyruvoylglucosamine reductase (AHRD V3.3 *-* A0A200Q3E8_9MAGN) Solyc02g063200.3 5 0 1 1 0 6 4 1 1 0 1 2 0 3 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B9I4_ARATH) Solyc02g063210.1 2 0 0 3 0 0 0 0 0 0 0 0 2 2 19 Leucine-rich repeat protein (AHRD V3.3 *-* A0A2G9GVT3_9LAMI) Solyc02g063220.3 459 294 270 288 244 206 222 182 313 388 329 258 278 290 289 Mannose-6-phosphate isomerase (AHRD V3.3 *** A0A2G2XBW4_CAPBA) AT1G67070 Solyc02g063230.1 64 149 177 170 91 85 60 64 209 219 654 88 100 119 162 membrane-associated kinase regulator (AHRD V3.3 *** AT1G67050.1) AT1G67050 Solyc02g063240.4 856 792 773 817 822 855 673 827 734 920 869 784 935 723 983 Delta(7)-sterol-C5(6)-desaturase (AHRD V3.3 *** A0A1U8FPX0_CAPAN) AT3G02580 Solyc02g063250.3 14 16 24 8 1 1 2 1 27 20 81 0 11 16 35 Peptide methionine sulfoxide reductase MsrA (AHRD V3.3 *** A0A1D8JN47_9ENTR) Solyc02g150124.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Enolase (AHRD V3.3 *-* A0A2G3A202_CAPAN) Solyc02g063260.4 15 17 72 77 68 103 91 55 24 45 27 75 8 35 36 Protein DETOXIFICATION (AHRD V3.3 *** A0A328DLR5_9ASTE) AT1G66760 Solyc02g063270.4 892 744 705 588 345 455 420 384 495 598 480 421 540 747 810 Protein DETOXIFICATION (AHRD V3.3 *** A0A328DLR5_9ASTE) AT1G66760 Solyc02g063280.4 406 417 359 217 197 185 219 167 239 157 322 241 637 479 492 stress response protein (AHRD V3.3 *-* AT1G60640.2) AT1G60640 Solyc02g063290.3 100 178 208 189 202 270 250 266 185 159 241 165 169 219 312 Histone chaperone (AHRD V3.3 *** A9TVI5_PHYPA) Solyc02g063300.3 116 137 149 149 213 112 129 137 112 134 95 160 133 119 154 carboxypeptidase (AHRD V3.3 *** AT5G38060.1) AT5G38060 Solyc02g063310.2 4 0 0 0 0 1 0 0 2 2 0 1 0 0 0 NOD26-like intrinsic protein 4.3 Solyc02g063320.4 141 55 44 84 48 70 66 60 76 82 71 59 91 88 180 U-box domain-containing protein 4-like (AHRD V3.3 *** A0A2I4HV32_9ROSI) AT3G03440 Solyc02g063330.3 46 109 201 118 140 140 150 133 86 97 192 130 139 100 159 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1NMG2_ARTAN) AT5G37790 Solyc02g063340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polcalcin Nic t 2 (AHRD V3.3 *** A0A2G3D1K3_CAPCH) AT3G03430 Solyc02g063350.1 35 27 107 35 26 29 27 15 25 15 80 19 25 24 133 Calcium-dependent protein kinase (AHRD V3.3 *-* CDPK_DAUCA) AT1G66400 Solyc02g063355.1 25 10 3 14 2 7 4 5 5 1 0 2 10 0 21 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LMA8_ARTAN) Solyc02g063370.2 1 2 8 9 0 8 1 1 0 8 15 3 0 0 2 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LMA8_ARTAN) Solyc02g063373.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_SOLLC) Solyc02g063377.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_SOLLC) Solyc02g063380.1 68 49 64 52 147 99 111 126 59 66 94 53 64 51 63 Unknown protein Solyc02g063390.4 29 113 55 78 103 108 88 124 204 232 197 342 118 101 72 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) (AHRD V3.3 *** O81042_ARATH) AT2G46890 Solyc02g063400.3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *-* A0A1Q3DJL5_CEPFO) Solyc02g063410.3 278 170 240 254 69 51 70 42 66 85 129 104 376 288 368 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** A0A2U1M3E1_ARTAN) Solyc02g063420.3 59 135 510 328 38 45 57 40 110 45 292 82 418 219 286 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** A0A2U1M3E1_ARTAN) AT5G65660 Solyc02g063430.4 64 292 315 280 536 554 425 391 248 187 263 337 373 351 223 bHLH transcription factor 078 Solyc02g063440.3 227 126 82 150 79 23 43 16 75 111 72 66 217 159 133 Unknown protein Solyc02g063450.4 4706 3843 3180 3816 2698 1700 1862 3570 5487 6489 5369 3837 2352 3592 7911 Glycine-rich domain-containing protein 2 (AHRD V3.3 *** A0A2G3A574_CAPAN) AT2G22660 Solyc02g063455.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc02g063460.1 102 110 115 211 126 109 136 135 78 211 133 134 130 108 45 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q9XII4_ARATH) AT2G16030 Solyc02g063470.1 0 0 0 0 0 5 1 0 0 0 0 1 0 0 0 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A200QEE6_9MAGN) Solyc02g063480.2 2 3 9 7 5 4 0 3 28 40 2 54 53 8 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc02g063490.3 510 413 490 494 420 452 406 433 564 424 650 518 532 493 606 Malate dehydrogenase (AHRD V3.3 *** A0A2G2XBH7_CAPBA) AT2G22780 Solyc02g063510.1 3 5 0 22 1 0 4 0 4 6 3 0 5 5 5 hypothetical protein (AHRD V3.3 *-* AT5G67020.1) AT2G22790 Solyc02g063520.3 752 492 313 317 271 256 298 212 291 417 342 215 901 456 1243 Homeobox-leucine zipper protein HAT22 (AHRD V3.3 *** A0A2G2XBJ3_CAPBA) Solyc02g063523.1 2 1 0 3 2 1 1 2 2 4 6 3 0 1 4 Squalene epoxidase (AHRD V3.3 *** I6YVX5_9ASPA) AT4G37760 Solyc02g063527.1 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 Squalene epoxidase (AHRD V3.3 *** I6YVX5_9ASPA) AT4G37760 Solyc02g063540.3 0 0 3 0 0 0 0 0 0 0 0 0 1 0 0 1-aminocyclopropane-1-carboxylate synthase 7 Solyc02g063543.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3 *** A0A2G2XH75_CAPBA) Solyc02g063547.1 0 2 0 0 8 0 1 1 0 0 1 1 0 3 2 Squalene epoxidase (AHRD V3.3 *** I6YVX5_9ASPA) AT4G37760 Solyc02g064560.1 111 24 5 2 0 0 0 0 4 11 0 0 4 25 23 protein PHLOEM PROTEIN 2-LIKE A10-like (AHRD V3.3 *** A0A2I4HNC1_9ROSI) Solyc02g064570.2 2 1 0 0 0 1 2 0 1 0 3 0 0 2 1 VQ motif-containing protein 29 (AHRD V3.3 *** A0A2G2VXX9_CAPBA) Solyc02g064580.3 663 657 664 609 653 760 722 608 591 495 498 622 728 657 521 Transmembrane protein (DUF2215) (AHRD V3.3 *** F4K567_ARATH) AT5G67610 Solyc02g064620.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1MQ52_ARTAN) AT4G20060 Solyc02g064590.2 19 9 19 18 28 8 14 22 27 27 0 18 3 22 6 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1MQ52_ARTAN) AT4G20060 Solyc02g064630.4 389 330 347 382 389 373 371 354 296 320 308 311 343 327 425 Telomere repeat-binding factor 1 (AHRD V3.3 *** A0A1J3IGS9_NOCCA) Solyc02g064640.4 311 265 258 287 322 431 399 336 244 240 204 240 316 244 321 ADP-ribosylation factor-like protein 8A (AHRD V3.3 *** A0A2G3BN09_CAPCH) AT3G49870 Solyc02g064650.3 393 388 446 623 429 509 425 412 510 468 330 430 380 510 366 xyloglucan endo-transglycosylase B2 AT2G14750 Solyc02g064660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g064670.1 1765 3097 3854 2647 3039 3149 3077 2767 2580 1716 2841 2109 4695 3816 3515 60S ribosomal protein L26 (AHRD V3.3 *** A0A1U8FHZ3_CAPAN) AT3G49910 Solyc02g064680.4 3278 2197 9133 3371 1284 1606 1344 1449 2624 6721 5268 2283 2484 2707 2144 Calcium-transporting ATPase (AHRD V3.3 *** A0A1U8FI07_CAPAN) AT4G37640 Solyc02g064690.3 522 204 57 79 35 32 29 23 64 177 139 93 77 165 43 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** A0A1P8B3D5_ARATH) AT4G37580 Solyc02g064700.3 1977 1603 1553 1668 1356 1328 1315 1451 1226 1996 1210 1320 1469 1517 1233 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1NAV0_ARTAN) AT2G23070 Solyc02g064710.3 84 46 57 61 39 44 52 39 58 57 88 63 64 67 50 transcriptional regulator of RNA polII%2C SAGA%2C subunit (AHRD V3.3 *** AT4G33890.2) AT4G33890 Solyc02g064720.3 1241 418 312 485 84 108 92 73 273 218 334 105 322 779 1523 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2XBD2_CAPBA) Solyc02g064730.3 6287 3212 4153 3293 2980 3332 3025 2288 2715 2461 3915 2457 3044 2832 4923 DUF1909-domain-containing protein (AHRD V3.3 *** A0A1J7IYE1_9PEZI) AT2G23090 Solyc02g064740.3 529 370 621 705 498 520 641 372 464 343 692 347 398 551 851 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G2XBH3_CAPBA) AT4G37480 Solyc02g064750.4 678 602 624 521 491 491 504 484 479 882 508 447 679 596 446 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1KVM6_ARTAN) AT4G33910 Solyc02g064760.3 0 0 1 1 0 2 2 1 2 1 0 4 2 0 0 Sigma-B regulation protein RsbQ (AHRD V3.3 *-* A0A2T0QUB6_9BURK) Solyc02g064770.4 1551 802 546 691 302 342 267 243 700 585 497 614 609 660 751 Sigma-B regulation protein RsbQ (AHRD V3.3 *** A0A2T0KZ78_9BURK) AT4G37470 Solyc02g064775.1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc02g064780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g064790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 COBRA-like protein (AHRD V3.3 *-* A0A2K3PB36_TRIPR) Solyc02g150125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3L8G7_TRIPR) Solyc02g064800.3 3850 1372 1106 1525 1246 1179 1396 1309 1217 1839 1664 1040 861 1087 1158 WD40 repeat (AHRD V3.3 *** A0A200PS16_9MAGN) Solyc02g064810.1 243 100 80 52 18 39 26 11 30 101 74 49 47 80 51 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1PM65_ARTAN) Solyc02g064830.4 17 17 171 28 14 9 8 14 19 43 30 26 2 15 6 Indole-3-acetic acid-amido synthetas 3-3 Solyc02g064840.1 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 Unknown protein Solyc02g064850.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G2XCE1_CAPBA) Solyc02g064860.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 cyclinD3_5 Solyc02g064870.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Protein kinase-like protein (AHRD V3.3 *** Q8LCP0_ARATH) Solyc02g064880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *** Q8LCP0_ARATH) Solyc02g064890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mitogen-activated protein kinase kinase kinase 17-like (AHRD V3.3 *-* XP_004233946.1) Solyc02g064900.3 0 6 0 0 6 7 1 8 0 4 0 0 2 1 0 cyclinD3_6 AT5G67260 Solyc02g064910.3 0 0 0 0 1 0 5 0 1 0 0 1 0 0 0 cyclinD3_7 Solyc02g064920.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *** Q8LCP0_ARATH) Solyc02g064930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MAP kinase kinase kinase 13 Solyc02g064940.1 13243 8489 5895 11923 7641 5971 5352 7161 9847 21922 8916 7219 10719 4617 5362 Leucine-rich repeat family protein (AHRD V3.3 *** G3CHK6_PONTR) Solyc02g064945.1 5 16 1 18 16 14 2 4 18 17 11 4 9 5 5 Glucuronoxylan 4-o-methyltransferase 1-like protein (AHRD V3.3 *** A0A2K3MTC9_TRIPR) AT5G67210 Solyc02g064950.3 741 771 649 679 616 516 507 543 736 845 702 902 698 831 612 CBS domain-containing protein (AHRD V3.3 *** A0A1Q3DGW2_CEPFO) AT4G36910 Solyc02g064960.3 291 367 224 491 568 610 651 387 145 105 358 139 333 249 290 APETALA2b AT4G36920 Solyc02g064970.4 0 0 2 1 0 1 0 0 0 2 0 1 1 3 1 Peroxidase (AHRD V3.3 *** K4B6T2_SOLLC) AT2G41480 Solyc02g064980.1 10 33 126 7 14 9 8 5 4 20 20 28 17 21 33 MAP kinase kinase kinase AT4G36950 Solyc02g064990.3 183 199 203 300 261 246 215 205 376 246 296 251 164 257 240 Remorin (AHRD V3.3 *** A0A200QZA9_9MAGN) Solyc02g065000.1 55 28 48 73 18 15 11 11 21 50 30 23 32 43 47 Calcium-binding EF-hand (AHRD V3.3 *** A0A2U1N7Z6_ARTAN) Solyc02g065010.1 12 4 13 19 0 9 5 4 6 14 6 3 4 19 21 EF-hand domain (AHRD V3.3 *** A0A200QZA6_9MAGN) Solyc02g065020.2 124 172 436 342 117 177 131 171 201 221 209 333 101 163 51 BEST plant protein match is: (TAIR:plant.1) protein, putative (AHRD V3.3 *** G7K7Z5_MEDTR) AT5G66800 Solyc02g065030.1 56 76 87 108 83 88 77 66 69 82 83 87 107 108 44 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R8L7_9MAGN) Solyc02g065040.1 0 5 10 31 1 0 1 0 23 0 0 20 0 1 0 Unknown protein Solyc02g065050.1 331 327 159 197 363 353 333 456 236 242 213 224 231 105 72 aspartic proteinase PCS1-like (AHRD V3.3 *** A0A2G3A5E0_CAPAN) AT2G39710 Solyc02g065060.3 30 35 30 16 9 12 31 12 26 91 27 28 37 31 30 Short-chain dehydrogenase/reductase SDR (AHRD V3.3 *** A0A200PU74_9MAGN) AT3G50560 Solyc02g065070.3 1351 1031 1098 1160 968 1038 984 900 1003 910 906 914 1232 1034 686 CDPK-related protein kinase (AHRD V3.3 *** A0A2G3D8R0_CAPCH) AT3G50530 Solyc02g065080.3 499 344 435 314 365 305 352 360 336 417 343 344 368 407 454 Phosphoglycerate mutase-like protein 4 (AHRD V3.3 *** A0A1U8FJL4_CAPAN) AT3G50520 Solyc02g065090.4 1 0 0 0 0 0 5 1 2 0 0 0 0 7 3 Patatin (AHRD V3.3 *** A0A2G2XCC6_CAPBA) Solyc02g065100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Patatin (AHRD V3.3 *** Q9FZ08_TOBAC) Solyc02g065110.3 1237 922 697 862 1148 1361 1286 1305 883 1129 678 993 732 658 644 MAP kinase kinase kinase 15 AT5G66850 Solyc02g065112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA pseudouridine synthase 7 (AHRD V3.3 *-* A0A2G2X2A6_CAPBA) Solyc02g065114.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc02g065116.1 18 23 28 28 49 28 30 10 26 20 21 22 36 34 30 Unknown protein Solyc02g065118.1 2 5 9 1 14 2 14 1 5 6 7 0 4 8 13 Unknown protein Solyc02g065140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g065150.2 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 LOB domain-containing protein 36 (AHRD V3.3 *** A0A2G3D2Y4_CAPCH) AT5G66870 Solyc02g065160.2 0 0 2 4 11 4 7 15 7 3 1 7 2 0 17 SWIB/MDM2 domain (AHRD V3.3 *-* A0A200QJ19_9MAGN) Solyc02g065170.3 122 1039 1243 611 1063 1152 1293 1127 728 906 1273 571 413 598 453 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A2G3D2Z5_CAPCH) AT5G66920 Solyc02g065180.3 228 139 153 176 139 179 130 138 173 197 167 168 209 160 163 Meiotically up-regulated protein (AHRD V3.3 *** F4K264_ARATH) AT5G66930 Solyc02g065190.3 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A1U9X5Y9_THAGA) AT2G45550 Solyc02g065210.4 1 1 0 1 0 4 0 8 10 14 7 2 4 0 0 Cytochrome P450 (AHRD V3.3 *** A0A1U9X5Y9_THAGA) AT2G45550 Solyc02g065220.4 409 285 105 223 87 70 77 81 251 333 216 66 351 207 247 Cytochrome P450 (AHRD V3.3 *** A0A1U9X5Y9_THAGA) AT2G45550 Solyc02g065230.3 15 67 12 23 116 69 76 108 48 33 6 20 45 6 13 Cytochrome P450 (AHRD V3.3 *** A0A1U9X5Y9_THAGA) AT2G45550 Solyc02g065240.3 83 182 57 176 108 180 133 246 224 300 58 196 243 129 60 Methyl esterase 1 (AHRD V3.3 *** A0A2U1LMY0_ARTAN) AT2G23620 Solyc02g065250.2 0 1 0 4 0 0 0 0 1 0 0 2 0 0 0 Methyl esterase 1 (AHRD V3.3 *** A0A2U1LMY0_ARTAN) AT2G23620 Solyc02g065253.1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 Methylesterase 1 (AHRD V3.3 *-* A0A2G3D2Z7_CAPCH) Solyc02g065257.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3AQH1_CEPFO) Solyc02g065260.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methylesterase 1 (AHRD V3.3 *** A0A2G3D300_CAPCH) Solyc02g065270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methylesterase 1 (AHRD V3.3 *-* A0A2G3D300_CAPCH) Solyc02g065280.3 55 75 76 80 44 56 40 63 131 87 80 90 70 29 82 Methylesterase 1 (AHRD V3.3 *** A0A2G3D300_CAPCH) AT2G23620 Solyc02g065290.1 387 300 706 682 469 584 339 515 282 594 555 983 94 403 101 Dof zinc finger protein2 Solyc02g065300.1 4326 6025 3662 3785 4431 4273 4262 4965 4542 3964 3285 4416 5349 5154 3618 Leucine--tRNA ligase, cytoplasmic (AHRD V3.3 *** A0A2G3D329_CAPCH) AT1G09620 Solyc02g065310.1 9 4 16 3 7 21 6 7 9 2 13 9 6 6 13 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3DFU3_CEPFO) Solyc02g065320.2 4 0 0 8 0 9 2 2 1 2 3 4 0 1 0 High mobility group B protein 2 (AHRD V3.3 *-* A0A2G3D313_CAPCH) Solyc02g065330.1 8 5 20 18 21 22 15 43 6 4 3 11 3 4 9 High mobility group B protein 2 (AHRD V3.3 *-* A0A2G3D313_CAPCH) Solyc02g065340.3 18 40 45 19 41 63 47 49 39 14 34 85 13 10 15 High mobility group B protein 3 (AHRD V3.3 *-* A0A2G3CLL5_CAPCH) AT5G18000 Solyc02g065350.3 171 578 886 773 1001 1172 1170 927 503 418 810 660 498 695 987 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3D977_CEPFO) Solyc02g065360.4 1178 637 525 646 492 492 560 552 378 626 506 662 576 628 527 Protein root UVB sensitive 4 (AHRD V3.3 *** A0A1U8FR98_CAPAN) AT2G23470 Solyc02g065370.3 1025 1017 1196 930 1039 1129 983 795 859 720 1311 834 1329 1360 1324 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2%2C 6-diaminopimelate ligase (AHRD V3.3 *** AT4G37090.1) AT4G37090 Solyc02g065380.3 723 972 993 1053 1130 1100 1060 1257 898 1281 848 1275 853 891 725 Cold-regulated plasma membrane protein 2 (AHRD V3.3 *** A0A1U8FJM9_CAPAN) AT3G50830 Solyc02g065400.3 3118 4867 2733 2895 7997 6349 6236 8590 5742 5721 3427 5219 2833 2064 2999 33kDa precursor protein of oxygen-evolving complex AT3G50820 Solyc02g065410.3 114 163 46 144 115 139 91 131 141 107 87 134 132 194 92 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q413_9MAGN) Solyc02g065420.3 111 81 153 95 73 99 100 66 56 76 85 79 53 81 78 CASP-like protein (AHRD V3.3 *** A0A2U1PJG0_ARTAN) AT3G50810 Solyc02g065430.1 188 157 396 248 75 98 59 52 83 88 176 72 172 95 117 HTH-type transcriptional regulator (AHRD V3.3 *** Q680G2_ARATH) AT2G23690 Solyc02g065440.3 0 0 12 3 0 0 0 5 0 0 0 0 0 0 2 F-box protein At5g03100-like (AHRD V3.3 *-* XP_010313235.1) Solyc02g065470.1 145 536 555 938 869 873 872 985 2212 1713 1713 1325 656 774 1074 Pathogenesis-related protein 1 (AHRD V3.3 *** A0A2K3L121_TRIPR) AT5G66590 Solyc02g065480.2 0 14 31 12 15 15 18 13 9 11 1 7 0 15 6 electron transporter%2C putative (Protein of unknown function%2C DUF547) (AHRD V3.3 *** AT5G66600.9) AT5G66600 Solyc02g065490.4 53 25 112 69 29 48 25 25 22 43 30 74 17 41 37 BEL1-like homeodomain protein 4 (AHRD V3.3 *** A0A2G3D326_CAPCH) Solyc02g065500.4 635 837 667 633 665 779 730 745 634 524 474 606 825 917 570 ribosome 60S biogenesis amino-terminal protein (AHRD V3.3 *** AT4G27010.1) AT4G27010 Solyc02g065510.1 111 105 91 68 105 148 112 155 101 95 59 84 142 162 81 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A5S6_CAPAN) AT5G66631 Solyc02g065520.1 129 96 143 162 121 114 138 70 78 68 98 118 84 103 169 Lyk10 (AHRD V3.3 *** G3KGB1_SOLLC) Solyc02g065530.4 35 65 57 266 15 24 27 30 170 472 143 129 236 82 462 Hexosyltransferase (AHRD V3.3 *** A0A2G2XBK6_CAPBA) Solyc02g065540.3 549 469 683 504 454 449 497 417 442 495 587 551 536 453 504 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G3D341_CAPCH) AT1G19310 Solyc02g065550.4 335 341 584 348 664 645 674 441 273 272 549 298 398 506 756 ACI19 AT2G23790 Solyc02g065560.1 34 72 63 51 116 69 52 53 50 39 81 55 69 96 67 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8FT74_CAPAN) AT2G33680 Solyc02g065570.1 227 113 208 79 92 108 133 58 186 107 451 109 112 143 255 DVL1 (AHRD V3.3 *** Q6X5V0_ARATH) AT5G16023 Solyc02g065580.3 672 897 730 714 640 678 762 629 635 631 855 803 1078 816 963 Cytochrome b561 (AHRD V3.3 *** Q3LGX4_CITLA) AT5G38630 Solyc02g065590.3 31 21 9 37 30 28 36 33 28 32 5 30 27 18 36 Alpha/Beta hydrolase fold protein (AHRD V3.3 *** A0A2U1Q9F9_ARTAN) Solyc02g065600.3 16 12 0 17 1 3 2 4 4 7 29 3 17 7 52 Protein trichome birefringence-like 19 (AHRD V3.3 *** A0A2G3D385_CAPCH) AT5G15900 Solyc02g065610.3 12 18 71 18 36 34 28 16 12 37 43 29 15 29 11 Protein trichome birefringence-like 21 (AHRD V3.3 *** A0A2G3A5R0_CAPAN) Solyc02g065620.3 615 618 799 577 540 682 569 575 490 452 504 486 511 576 606 BRCT domain-containing protein (AHRD V3.3 *** A0A1J3H3Y1_NOCCA) AT1G67180 Solyc02g065630.4 1523 1427 1094 1000 1160 1137 1114 1272 1246 1242 1042 1197 1341 1362 892 Protein FLX-like 2 (AHRD V3.3 *** A0A2G3D383_CAPCH) AT1G67170 Solyc02g065640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late embryogenesis abundant protein (LEA) family protein (AHRD V3.3 *** A0A2U1MVV9_ARTAN) AT5G38760 Solyc02g065650.1 344 235 192 240 172 133 165 222 187 230 117 191 185 231 185 RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) Solyc02g065660.4 627 666 628 794 619 725 745 604 574 482 656 569 586 732 785 WPP domain-interacting tail-anchored protein 2 (AHRD V3.3 *** A0A1J3JZ59_NOCCA) AT5G11390 Solyc02g065670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4F7C4_9ROSI) Solyc02g065680.3 1971 1867 1495 1678 2352 2309 2241 2080 1811 1986 1704 1722 1485 1219 1787 Amino acid transporter (AHRD V3.3 *** A0A200QY84_9MAGN) AT3G30390 Solyc02g065690.3 133 68 103 95 75 94 97 80 90 74 90 87 111 89 188 Biogenesis of lysosome-related organelles complex 1 subunit 2 (AHRD V3.3 *** A0A1U8FIA1_CAPAN) AT5G49550 Solyc02g065700.3 1519 694 362 589 680 633 615 542 654 942 619 624 699 501 690 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9LY90_ARATH) Solyc02g065710.3 0 0 0 0 0 0 0 4 2 1 0 1 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6RUC3_ACTCH) Solyc02g065720.3 531 258 393 356 214 175 175 174 327 436 365 294 380 338 490 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QNZ5_ARTAN) AT3G02290 Solyc02g065730.2 406 412 555 306 100 151 102 132 309 497 862 263 907 271 1364 MADS box transcription factor (AHRD V3.3 *** Q689E7_GENTR) Solyc02g065740.3 1 14 2 1 0 3 4 2 9 10 1 6 8 2 7 alpha-1,4-glucan-protein synthase [UDP-forming] 1-like (AHRD V3.3 *** A0A2G3A5L5_CAPAN) Solyc02g065750.3 0 0 0 0 0 0 0 0 3 1 5 3 0 0 1 cytochrome P450 AB190445 Solyc02g065753.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200PRP1_9MAGN) Solyc02g065757.1 0 0 3 0 4 3 0 3 0 0 0 1 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc02g065760.3 10 4 1 8 15 8 7 14 0 0 4 11 0 5 6 Unknown protein Solyc02g065765.1 1702 2699 2355 3257 2131 2034 2163 2222 4069 3899 3053 2366 3372 2188 4101 COBRA-like protein (AHRD V3.3 *** K4B708_SOLLC) AT5G60920 Solyc02g065780.1 330 417 359 702 632 660 655 559 503 506 719 368 502 243 510 Protein RALF-like 27 (AHRD V3.3 *** A0A2G3D352_CAPCH) AT3G29780 Solyc02g065790.3 1007 874 791 753 857 1005 1015 900 771 740 785 702 611 841 746 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *-* A0A1I9LMI0_ARATH) Solyc02g065800.3 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 TCP transcription factor 28 Solyc02g150126.1 10 7 9 5 0 2 3 2 3 1 0 3 6 2 6 Unknown protein Solyc02g066800.3 7 1 0 2 0 4 1 3 5 5 0 4 2 2 3 Unknown protein Solyc02g066803.1 31 32 34 64 53 79 67 53 33 12 28 31 16 14 8 Unknown protein Solyc02g066807.1 4 1 0 16 7 2 8 7 7 2 13 5 1 4 4 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *-* F4K1Y4_ARATH) Solyc02g066830.4 223 225 299 299 158 249 253 171 172 154 344 158 201 263 392 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *** F4K1Y4_ARATH) Solyc02g066840.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP3-like (AHRD V3.3 *-* XP_010317361.1) Solyc02g066850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g066853.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc02g066855.1 0 5 0 1 0 0 0 0 0 2 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g066857.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g066880.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ninja-family protein AFP3-like (AHRD V3.3 *-* XP_010317361.1) Solyc02g066890.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g066900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g066905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ninja (AHRD V3.3 *-* A0A200QVW0_9MAGN) Solyc02g066910.3 381 468 417 525 435 460 519 387 483 384 493 424 420 488 412 Nucleotide/sugar transporter family (AHRD V3.3 *** A0A1Y1INK6_KLENI) AT3G17430 Solyc02g066920.3 100 97 144 86 197 168 162 131 133 142 257 98 69 81 233 Chlororespiratory reduction 7 (AHRD V3.3 *** A0A2U1NIM3_ARTAN) AT5G39210 Solyc02g066930.3 399 266 389 225 223 205 258 171 245 144 271 347 375 334 302 RNA-binding protein (AHRD V3.3 *-* Q941H9_TOBAC) Solyc02g066940.4 7786 5125 5358 4955 3893 4462 4669 3530 3848 5068 5403 3816 4615 4433 4917 Protein RIK (AHRD V3.3 *** A0A2G3D3D0_CAPCH) AT3G29390 Solyc02g066950.4 1016 1098 1247 1412 1206 1187 1456 1229 1606 1156 1186 1036 1197 1323 1473 Alpha-amylase isozyme 2A (AHRD V3.3 *** A0A2G3A5T2_CAPAN) Solyc02g066960.3 7 5 3 15 8 17 6 11 20 13 3 14 4 1 0 UDP-glycosyltransferase 83A1 (AHRD V3.3 *** A0A1J3EZ71_NOCCA) AT3G02100 Solyc02g066970.1 14 162 362 284 137 135 174 144 267 60 170 243 99 210 103 hypothetical protein (AHRD V3.3 *-* AT3G29370.1) AT3G29370 Solyc02g066980.1 15 41 29 63 130 144 128 123 51 25 68 103 8 34 30 TPX2 (Targeting protein for Xklp2) protein family (AHRD V3.3 *** F4K9T9_ARATH) AT5G15510 Solyc02g066990.2 17 31 40 47 105 120 83 163 93 63 55 50 57 35 25 Unknown protein Solyc02g066993.1 17 17 3 27 19 12 25 7 10 18 32 21 13 24 38 cathepsin B-like protease 3 (AHRD V3.3 *-* XP_004233221.1) Solyc02g066997.1 8 4 1 0 9 1 2 0 2 1 0 4 3 0 4 Unknown protein Solyc02g067010.3 35 125 147 193 206 294 316 197 206 150 160 226 147 151 260 ARF guanine-nucleotide exchange factor GNL1 (AHRD V3.3 *** A0A1U8FQ69_CAPAN) Solyc02g067015.1 0 0 0 3 0 2 0 0 1 0 4 0 0 0 0 Unknown protein Solyc02g067020.1 2 0 0 0 0 0 2 3 2 0 0 1 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3D9K3_CAPCH) Solyc02g067030.4 2779 2374 1967 2168 2480 2205 2246 2529 2157 2598 1653 2091 2288 2454 2356 SNF1 AT3G01090 Solyc02g067040.3 121 181 141 219 192 228 209 242 226 138 138 163 85 158 87 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A1J3E5X3_NOCCA) AT3G29180 Solyc02g067050.3 265 52 19 24 126 69 104 137 43 195 49 37 8 29 120 UPF0301 protein (AHRD V3.3 *** A0A2K3PAH7_TRIPR) AT3G29240 Solyc02g067060.3 336 328 428 393 391 518 485 421 382 390 463 427 307 391 429 Hexosyltransferase (AHRD V3.3 *** A0A1U8FIH2_CAPAN) AT5G15470 Solyc02g067070.4 627 504 653 632 559 513 483 512 565 502 558 541 771 704 765 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein (AHRD V3.3 *-* AT5G61190.1) Solyc02g067080.4 675 1577 1039 1150 1506 1405 1297 1492 1723 1373 1160 1178 1975 1442 1022 UDP-glucose 6-dehydrogenase (AHRD V3.3 *** Q6IVK6_TOBAC) AT5G15490 Solyc02g067085.1 4 8 7 12 4 8 15 9 3 8 5 8 3 4 2 Unknown protein Solyc02g067090.4 2246 1314 1210 1223 1193 1207 1320 1327 1438 1303 1296 1350 965 1314 1548 Coilin (AHRD V3.3 *-* COIL_ARATH) AT1G13030 Solyc02g067100.3 58 531 601 874 1212 1539 1526 1203 561 223 693 768 79 348 364 TPX2 (Targeting protein for Xklp2) protein family (AHRD V3.3 *** F4K9T9_ARATH) AT5G15510 Solyc02g067103.1 10 20 4 17 9 10 18 16 11 15 2 14 8 12 2 Unknown protein Solyc02g067107.1 254 191 311 326 225 307 291 153 155 189 332 223 129 208 310 Unknown protein Solyc02g067120.4 1189 951 1134 1048 1534 1527 1730 1484 1033 1204 1088 998 760 767 1140 hypothetical protein (DUF1997) (AHRD V3.3 *** AT5G39530.1) AT5G39530 Solyc02g067160.4 693 411 402 427 316 327 357 280 361 366 366 331 265 313 347 SPX domain-containing protein 4 (AHRD V3.3 *** A0A1U8FRG4_CAPAN) AT5G15330 Solyc02g067150.4 0 0 0 2 0 0 0 1 3 1 2 0 0 0 4 glycine-rich protein (AHRD V3.3 *-* AT3G29075.1) AT5G39570 Solyc02g067180.3 2017 3919 2975 3704 5716 5712 5992 5399 3647 2946 2255 3098 4273 3663 2723 cystathionine gamma synthase AT3G01120 Solyc02g067190.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_SOLTU) AT5G15290 Solyc02g067200.4 213 224 225 196 176 242 233 193 145 158 168 156 218 180 169 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QP33_9MAGN) AT5G15280 Solyc02g067210.3 6801 6168 5951 6424 5902 6835 6370 5550 4967 4976 5510 5060 5594 5908 6114 KH domain-containing protein (AHRD V3.3 *** A0A1J3DQI6_NOCCA) AT5G15270 Solyc02g067220.4 0 4 3 0 1 3 2 1 2 0 0 0 3 0 12 Calmodulin-like protein (AHRD V3.3 *-* B6TXW9_MAIZE) AT3G29000 Solyc02g067230.3 952 869 112 341 453 428 407 722 290 409 107 201 431 150 101 Dof zinc finger protein3 AT5G39660 Solyc02g067240.3 0 3 0 3 2 0 2 5 4 1 0 0 3 4 9 Unknown protein Solyc02g067250.3 176 77 122 97 25 52 49 42 88 104 58 69 82 46 124 Ribosomal protein L34e superfamily protein (AHRD V3.3 *** A0A2U1Q180_ARTAN) AT5G15260 Solyc02g067270.3 78 33 41 52 21 37 28 17 49 40 28 33 18 36 57 Unknown protein Solyc02g067280.1 17 7 5 4 12 1 8 5 28 16 0 6 6 6 1 RING/U-box superfamily protein (AHRD V3.3 *-* Q93YQ5_ARATH) Solyc02g067290.3 26 53 46 25 27 28 41 28 27 27 20 22 27 32 40 Structural maintenance of chromosomes protein (AHRD V3.3 *-* A0A328DN75_9ASTE) Solyc02g067300.2 12 4 18 7 2 6 14 9 17 3 4 7 9 3 7 Structural maintenance of chromosomes protein (AHRD V3.3 *-* A0A0K9Q8I9_SPIOL) Solyc02g067310.4 2918 4243 3545 4005 4762 4677 3968 4631 3810 2989 2752 4125 4506 3878 2384 Zinc-finger homeodomain protein 10 (AHRD V3.3 *** A0A2G2XD03_CAPBA) AT5G39760 Solyc02g067320.3 1941 3637 2545 2889 3988 3679 3415 3689 3369 2075 2219 2832 4008 2951 1951 Zinc-finger homeodomain protein 10 (AHRD V3.3 *** A0A2G3D3J7_CAPCH) AT5G39760 Solyc02g067330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger homeodomain protein 1 (AHRD V3.3 *** B6SKR5_MAIZE) Solyc02g067340.4 189 278 407 261 212 184 184 141 247 203 313 185 171 275 255 R2R3MYB transcription factor 96 Solyc02g067350.3 45 17 0 14 0 2 1 1 5 3 8 1 4 8 20 DUF1666 domain-containing protein (AHRD V3.3 *-* A0A1Q3AQV7_CEPFO) AT5G39785 Solyc02g067360.3 133 173 177 277 242 219 238 220 256 186 221 338 131 202 193 Protease Do-like 8, chloroplastic (AHRD V3.3 *** A0A2G3A5X1_CAPAN) AT5G39830 Solyc02g067370.4 1084 1594 2270 1708 1828 1833 1551 1670 1458 1163 1622 1627 1797 1876 2082 Nucleosome assembly protein family (AHRD V3.3 *** A9RDK1_PHYPA) Solyc02g067380.4 4 35 7 9 9 4 1 4 13 35 19 14 3 9 26 Unknown protein Solyc02g067390.3 303 321 224 207 229 198 233 212 273 306 242 205 319 275 365 Binding partner of ACD11 1 (AHRD V3.3 *** A0A199VQH5_ANACO) AT3G01210 Solyc02g067400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutaredoxin family protein (AHRD V3.3 *-* A0A2K3KYH7_TRIPR) Solyc02g067410.2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HOX21 (AHRD V3.3 *** A0A2G3A638_CAPAN) AT5G15150 Solyc02g067420.3 1349 803 959 965 913 894 887 814 775 1047 973 711 773 611 811 Ubiquitin-conjugating enzyme (AHRD V3.3 *** Q5ZFS2_PLAMJ) Solyc02g067430.3 0 0 2 0 0 0 3 0 1 1 0 2 1 0 0 WRKY transcription factor 72 Solyc02g067440.3 48 71 265 72 169 264 268 252 79 171 302 133 158 125 95 meloidogyne-induced giant cell protein DB114 AT5G39890 Solyc02g067450.4 0 8 49 2 0 0 7 10 0 0 0 0 6 0 4 Pectate lyase (AHRD V3.3 *** A0A1U8FTH1_CAPAN) Solyc02g067460.3 2168 7511 6213 4820 7384 6773 6688 7641 5114 4099 4261 5310 8148 6537 4245 Mitochondrial outer membrane protein porin (AHRD V3.3 *** A0A2K3KY08_TRIPR) AT3G01280 Solyc02g067470.4 137 176 294 145 239 257 223 210 172 188 236 218 191 219 171 Hypersensitive-induced response protein (AHRD V3.3 *** A6YGE4_CARPA) Solyc02g067480.3 19 123 102 118 148 186 179 196 82 58 83 150 82 118 56 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A2U1MZ38_ARTAN),Pfam:PF03486 AT5G39940 Solyc02g067490.3 2 23 11 25 24 37 49 28 23 16 7 23 16 14 39 Actin cross-linking protein (DUF569) (AHRD V3.3 *** Q9XIF7_ARATH) Solyc02g067510.3 0 0 8 3 0 2 8 0 0 0 0 3 1 0 0 Actin cross-linking protein, putative (DUF569) (AHRD V3.3 *** Q8GXC9_ARATH) Solyc02g067520.4 455 325 536 515 302 442 496 264 329 276 443 300 285 408 436 Unknown protein Solyc02g067530.4 259 350 424 296 239 277 244 274 279 334 331 199 500 312 280 Oxoglutarate/iron-dependent oxygenase (AHRD V3.3 *** A0A2U1MYZ7_ARTAN) AT3G28480 Solyc02g067540.3 660 615 828 762 697 682 724 678 629 545 557 645 536 657 640 Methyltransferase (AHRD V3.3 *** A0A2U1QFS7_ARTAN),Pfam:PF03602 AT3G28460 Solyc02g067550.2 16 22 60 27 58 67 43 34 40 36 48 43 23 32 16 CLE protein 3 AT3G28455 Solyc02g067560.1 113 136 159 138 136 172 138 142 208 165 149 220 211 220 189 Inactive receptor kinase (AHRD V3.3 *** A0A2R6P9E5_ACTCH) AT3G28450 Solyc02g067570.3 1641 1296 1220 1115 1090 1226 1218 1186 1364 1276 1158 1182 1056 1348 1202 Paired amphipathic helix protein Sin3-like 1 (AHRD V3.3 *** A0A2G2XCQ9_CAPBA) AT5G15020 Solyc02g067580.3 796 1305 1546 1574 2512 2803 2372 2220 898 1190 2168 1331 845 1062 882 B12D protein (AHRD V3.3 *** Q9XHD5_IPOBA) AT3G48140 Solyc02g067590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* D3WC93_NELNU) Solyc02g067600.1 0 0 7 2 0 4 1 2 8 1 26 1 2 6 0 Unknown protein Solyc02g067605.1 12 6 17 13 10 7 11 4 6 2 6 7 6 12 1 Unknown protein Solyc02g067620.3 1274 733 560 910 594 577 539 740 585 1135 527 741 687 824 654 Metal tolerance protein 8 (AHRD V3.3 *-* A0A2G2Y0P2_CAPAN) AT2G04620 Solyc02g067630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 abscission polygalacturonase 2 AT3G59850 Solyc02g067640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** O22817_ARATH) AT3G59850 Solyc02g067650.3 0 0 1 0 7 0 0 1 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** O22817_ARATH) AT3G59850 Solyc02g067655.1 43 65 100 84 117 110 125 122 55 59 129 65 81 62 101 Unknown protein Solyc02g067660.4 1946 1471 2386 1480 891 833 717 950 1345 2197 4059 1078 2321 1873 1295 Alpha/Beta hydrolase fold protein (AHRD V3.3 *** A0A2U1Q6M2_ARTAN) AT5G14930 Solyc02g067670.4 1752 1500 1722 1239 1347 1538 1547 1504 1782 1320 1387 1520 1218 1581 1623 DNA repair protein UVH3 (AHRD V3.3 *** A0A2G2XCM0_CAPBA) AT3G28030 Solyc02g067680.1 89 264 278 145 233 225 181 205 181 159 177 172 167 153 57 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1N3Q0_ARTAN) AT5G40250 Solyc02g067690.3 88 166 157 136 372 200 209 249 148 155 110 104 103 107 112 Glycosyltransferase (AHRD V3.3 *** A0A2U1M9M1_ARTAN) AT2G16890 Solyc02g067700.1 62 111 66 74 54 82 52 54 60 58 58 38 63 58 76 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LDD8_ARTAN) Solyc02g067710.3 139 85 124 150 150 153 192 127 104 81 153 154 67 103 96 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1PMP5_ARTAN) AT5G14790 Solyc02g067720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exonuclease family protein (AHRD V3.3 *** A0A2U1PL29_ARTAN) AT5G40310 Solyc02g067730.2 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 RNA exonuclease 4-like (AHRD V3.3 *** A0A2I4FB02_9ROSI) AT5G40310 Solyc02g067740.4 441 535 278 332 385 342 374 377 375 369 349 350 414 418 454 beta-galactosidase (AHRD V3.3 *** AT3G27930.1) AT3G27930 Solyc02g067750.4 4 6 0 0 0 0 0 0 64 3 1 0 2 2 1 Carbonic anhydrase (AHRD V3.3 *** A0A2G3D3J4_CAPCH) Solyc02g067760.4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 R2R3MYB transcription factor 21 AT3G27810 Solyc02g067770.3 0 1 1 1 6 6 0 11 1 3 2 8 4 1 7 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *-* A0A2I0VVQ8_9ASPA) Solyc02g067780.3 11 25 35 28 35 71 54 38 23 17 40 60 49 32 42 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *** A0A2G2VMT5_CAPBA) Solyc02g067790.4 0 2 1 1 7 0 8 8 3 8 6 1 35 4 0 High affinity nitrate transporter 2.7 (AHRD V3.3 *** A0A2G2Y0R2_CAPAN) AT5G14570 Solyc02g067800.4 113 68 128 153 52 83 57 45 111 191 202 68 88 118 99 LOB domain-containing protein (AHRD V3.3 *** A0A2U1M8Q7_ARTAN) AT3G27650 Solyc02g067810.1 68 118 99 85 113 112 118 99 92 81 61 86 133 77 87 Cyclin-dependent protein kinase inhibitor SMR6 (AHRD V3.3 *** SMR6_ARATH) AT5G40460 Solyc02g067820.4 1501 1439 1256 1418 1577 1580 1520 1704 1478 2259 1376 1770 1300 1340 1269 Gaa1-like, GPI transamidase component (AHRD V3.3 *** A0A2U1KP79_ARTAN) AT5G19130 Solyc02g067830.3 146 366 349 314 343 344 377 317 364 253 382 248 299 352 437 Protein kinase G11A (AHRD V3.3 *** A0A2G3A680_CAPAN) AT3G27580 Solyc02g067840.3 804 678 558 447 391 340 368 379 670 587 539 582 913 764 728 altered inheritance of mitochondria protein 32-like (AHRD V3.3 *** A0A2I4HUQ2_9ROSI) AT5G40510 Solyc02g067850.2 25 32 48 61 67 59 72 35 30 25 68 39 19 63 45 U-box domain-containing protein 4-like (AHRD V3.3 *** A0A2K3PH98_TRIPR) AT5G14510 Solyc02g067860.4 608 388 308 519 368 247 289 216 392 469 388 366 452 374 333 Glucose-6-phosphate 1-epimerase (AHRD V3.3 *** A0A1U8FRS7_CAPAN) AT5G14500 Solyc02g067870.3 3 2 0 0 0 0 3 1 0 1 19 0 1 2 0 chalcone isomerase Solyc02g067880.3 0 4 0 0 0 0 1 0 4 0 0 0 0 0 0 Uridine kinase (AHRD V3.3 *** A0A2G2XD18_CAPBA) AT3G27440 Solyc02g067890.3 621 785 600 651 1250 1071 1023 1330 760 802 675 665 793 603 570 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MED4_ARTAN) AT5G14430 Solyc02g067900.3 405 297 356 327 305 333 344 276 283 231 287 291 357 319 374 Bromodomain testis-specific protein (AHRD V3.3 *** Q45GG8_ARATH) AT5G40600 Solyc02g067905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g067910.1 294 492 457 430 652 557 505 470 344 278 372 405 541 464 438 Unknown protein Solyc02g067920.4 384 426 493 276 338 350 313 366 411 379 497 378 492 388 356 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9LY90_ARATH) AT3G01690 Solyc02g067930.3 228 659 993 807 1258 1446 1556 1087 673 607 1004 1005 437 640 743 Glycerol-3-phosphate dehydrogenase [NAD(+)] (AHRD V3.3 *** A0A1U8FRT5_CAPAN) AT5G40610 Solyc02g067935.1 8 1 4 10 0 0 0 0 4 9 11 1 17 3 1 Calcium-binding site protein (AHRD V3.3 *** O22947_ARATH) AT5G24640 Solyc02g067950.4 151 750 874 1270 1789 1777 1620 2067 719 493 836 1105 366 658 523 TPX2 (Targeting protein for Xklp2) protein family (AHRD V3.3 *-* F4J761_ARATH) AT3G01710 Solyc02g067960.3 137 181 148 191 186 140 206 182 156 170 154 175 171 167 98 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** O64531_ARATH) AT1G79220 Solyc02g067970.4 65 332 331 451 880 902 791 766 413 177 524 524 61 225 192 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *-* F4IWG7_ARATH) Solyc02g067980.3 832 880 1156 936 877 1080 1126 960 990 998 1064 795 954 995 831 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *** A0A1U8FK60_CAPAN) AT1G13460 Solyc02g067990.3 990 1187 1400 1442 1632 1909 1856 1594 1384 1128 1458 1380 1158 1275 1264 AUGMIN subunit 6-like (AHRD V3.3 *** A0A2I4E4M7_9ROSI) AT5G40740 Solyc02g068000.2 244 140 176 129 145 142 151 139 126 153 164 178 119 197 197 F-box protein (AHRD V3.3 *** A0A1J3ESG6_NOCCA) Solyc02g068010.4 477 421 271 511 483 432 358 504 328 693 313 561 438 343 236 TRAM/LAG1/CLN8-like domain-containing protein (AHRD V3.3 *-* A0A2U1PG06_ARTAN) AT3G25950 Solyc02g068020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g068040.3 1462 445 488 353 117 141 95 81 256 489 308 354 299 449 1128 Unknown protein Solyc02g068050.4 422 367 248 354 405 381 342 410 502 434 210 451 286 377 252 Rubisco methyltransferase family protein (AHRD V3.3 *** Q8VZB5_ARATH) AT5G14260 Solyc02g068060.3 446 447 677 618 798 879 903 727 586 590 865 763 452 554 648 Protein kinase domain (AHRD V3.3 *** A0A200QYA9_9MAGN) AT5G14210 Solyc02g068070.4 195 651 699 692 2346 1928 1839 2128 669 807 717 974 466 599 365 Lipase (AHRD V3.3 *** A0A1U8FRV6_CAPAN) AT5G14180 Solyc02g068080.3 1086 1037 1002 745 2055 2226 2383 2170 1317 1183 2217 1073 1681 1692 2998 Chloride channel protein (AHRD V3.3 *** K4B7E0_SOLLC) AT3G27170 Solyc02g068090.3 454 1151 1090 1693 1658 1223 1497 1983 1141 1373 970 1141 907 966 756 30S ribosomal protein S21 (AHRD V3.3 *** A0A2G2XI83_CAPBA) AT3G27160 Solyc02g068100.3 5159 4242 3390 3413 3603 3500 3200 4322 4151 4830 2913 4528 4117 4019 3099 SWI/SNF complex component SNF12-like protein (AHRD V3.3 *** A0A2G3BVC1_CAPCH) AT5G14170 Solyc02g068110.4 720 494 732 657 899 845 904 639 492 370 626 509 575 519 580 Transcription and mRNA export factor ENY2 (AHRD V3.3 *** A0A2G3D3N3_CAPCH) AT3G27100 Solyc02g068120.3 351 662 739 530 976 851 831 1158 750 654 821 914 690 598 663 DCD (Development and Cell Death) domain protein (AHRD V3.3 *-* A0A2U1P2J5_ARTAN) AT3G27090 Solyc02g068130.4 3060 3137 3393 2928 2776 2517 2581 2316 2263 2355 2915 2270 4052 3612 4126 Mitochondrial import receptor subunit TOM20 (AHRD V3.3 *** TOM20_SOLTU),Pfam:PF06552 AT3G27080 Solyc02g068140.3 29 88 90 70 184 124 122 132 67 28 30 40 49 46 94 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1PZJ0_ARTAN) AT3G01930 Solyc02g068150.4 702 1893 1895 1463 2024 1924 2170 1980 1319 952 1496 1408 2440 1910 1588 Nuclear transport factor 2 (AHRD V3.3 *** A0A2G2XD55_CAPBA) Solyc02g068160.1 47 27 32 105 56 35 39 29 25 39 103 17 39 48 73 Transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** Q9SMN3_ARATH) AT3G27027 Solyc02g068170.1 22 8 6 37 0 1 0 0 0 3 1 3 0 12 14 Unknown protein Solyc02g068180.3 259 224 336 251 299 226 292 295 214 195 239 247 212 242 296 ABC transporter ATP-binding protein (AHRD V3.3 *** A0A347ZBK6_LACPN) AT5G14100 Solyc02g068190.1 56 55 19 33 38 34 35 50 32 38 10 40 46 62 22 RNA helicase DEAD6 Solyc02g068195.1 3 0 1 3 13 5 7 2 4 3 1 3 3 5 14 Unknown protein Solyc02g068200.1 407 177 251 173 52 65 57 28 107 177 238 47 263 223 321 TCP transcription factor 18 AT3G27010 Solyc02g068210.1 2 0 4 0 0 1 0 0 0 0 0 7 0 0 2 UDP-glycosyltransferase 87A1-like (AHRD V3.3 *-* A0A2I4F9W2_9ROSI) Solyc02g068220.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 UDP-glycosyltransferase 87A2-like (AHRD V3.3 *-* A0A2I4F9Y2_9ROSI) Solyc02g068230.3 434 498 677 619 666 789 687 630 608 375 716 507 628 665 735 Membrane-anchored ubiquitin-fold protein (AHRD V3.3 *** A0A2G3D3P3_CAPCH) AT3G26980 Solyc02g068240.4 542 347 283 249 260 257 314 246 447 507 305 477 305 284 329 Diacylglycerol O-acyltransferase 2 (AHRD V3.3 *** A0A2G3D3R8_CAPCH) AT3G51520 Solyc02g068250.4 3 1 0 2 4 6 0 5 1 9 3 5 0 2 0 Unknown protein Solyc02g068260.3 120 91 111 89 48 91 85 56 49 65 75 56 59 118 125 Vacuolar iron transporter-like protein 4 (AHRD V3.3 *** A0A2G3A6A6_CAPAN) Solyc02g068270.4 185 158 190 243 190 156 226 168 234 175 293 244 186 191 271 transmembrane protein (AHRD V3.3 *** AT3G51510.1) AT3G51510 Solyc02g068280.4 379 581 737 830 1069 1205 1205 756 694 480 883 734 468 575 1105 subtilisin-like protein Solyc02g068290.2 452 246 337 212 207 226 222 250 363 352 317 262 343 288 436 hypothetical protein (AHRD V3.3 *-* AT3G51500.1) AT3G51500 Solyc02g068295.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) ATMG00240 Solyc02g068300.3 274 319 290 289 187 208 178 191 298 289 447 240 376 411 370 Lectin-receptor kinase (AHRD V3.3 *** A0A2U1KV35_ARTAN) Solyc02g068310.4 43 76 154 108 146 137 129 126 127 93 126 125 57 101 133 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9XI75_ARATH) AT1G14130 Solyc02g068315.1 159 302 331 343 363 329 339 270 532 412 379 308 325 359 335 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9XI75_ARATH) AT1G14130 Solyc02g068330.2 2 1 0 7 7 11 5 3 4 0 1 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9XI75_ARATH) AT1G14130 Solyc02g068340.3 931 1846 2001 1760 2630 2845 3008 2849 1914 1299 1639 1782 1499 1962 1614 Kinesin-like protein (AHRD V3.3 *** O24147_TOBAC) AT5G65930 Solyc02g068350.1 189 503 339 406 670 509 565 659 437 314 242 371 351 419 322 Uroporphyrinogen-III synthase (AHRD V3.3 *** B6U9W1_MAIZE) Solyc02g068360.4 486 366 367 306 276 295 337 260 258 264 458 253 309 254 491 Tafazzin family protein (AHRD V3.3 *** A0A1U8FTW9_CAPAN) AT1G78690 Solyc02g068370.3 738 641 765 612 494 770 746 509 590 712 719 582 800 690 512 C-type lectin receptor-like tyrosine-protein kinase (AHRD V3.3 *** A0A2G3D3S0_CAPCH) AT1G52310 Solyc02g068380.3 871 797 498 538 914 881 989 1000 705 888 446 536 554 574 495 Allantoate deiminase/N-carbamoyl-L-amino-acid hydrolase (AHRD V3.3 *** A0A316ELX8_9BURK) AT4G20070 Solyc02g068390.3 59 136 139 166 201 214 253 184 146 141 218 146 147 148 115 Mitochondrial inner membrane protease subunit 1 (AHRD V3.3 *** A0A1J3ERE8_NOCCA) AT1G53530 Solyc02g068400.3 23 57 86 116 45 50 39 30 82 69 69 117 55 85 78 Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G20050.7) AT4G20050 Solyc02g068410.3 4 3 8 3 13 20 14 13 6 1 7 8 0 18 59 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1KSX1_ARTAN) AT4G20040 Solyc02g068415.1 47 70 55 117 0 3 0 3 52 28 21 2 103 99 67 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1KVX7_ARTAN) Solyc02g068420.4 6698 4671 4207 3425 3351 3938 3444 3181 3365 3304 3081 3270 3963 3948 4671 Ribosome biogenesis protein NOP53 (AHRD V3.3 *** A0A200QRU3_9MAGN) AT2G40430 Solyc02g068430.4 1907 1614 2072 1192 1377 1347 1095 1415 1855 1676 1898 1206 1667 1487 1650 Choline-phosphate cytidylyltransferase (AHRD V3.3 *** A0A2I0V8H3_9ASPA) AT2G32260 Solyc02g068440.3 260 200 348 208 265 289 258 175 190 224 247 237 125 202 308 RNA binding protein (AHRD V3.3 *-* B6U487_MAIZE) AT4G20030 Solyc02g068450.3 775 1347 1516 1635 1447 1254 1400 1340 1414 1472 1223 1225 1854 1470 1268 V-type proton ATPase subunit F (AHRD V3.3 *** A0A1U8FKD8_CAPAN) AT4G02620 Solyc02g068460.1 18 16 0 0 0 0 0 0 0 1 0 0 39 0 0 VQ motif-containing protein 22 (AHRD V3.3 *** A0A2G3D3T0_CAPCH) Solyc02g068480.3 1075 1046 894 814 825 802 834 942 882 990 681 923 944 1074 822 U4/U6.U5 tri-snRNP-associated protein 2 (AHRD V3.3 *** A0A2G2XD80_CAPBA) AT4G22285 Solyc02g068485.1 0 0 3 0 0 4 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g068490.4 1206 764 654 787 672 526 538 593 894 978 720 712 648 781 747 Copper-transporting ATPase RAN1 (AHRD V3.3 *** A0A2G3D3S9_CAPCH) AT5G44790 Solyc02g068500.3 760 1075 1031 1163 1290 1233 1322 1460 973 1187 843 1215 1024 1012 857 Thioredoxin O1, mitochondrial (AHRD V3.3 *** A0A2G3A6C2_CAPAN) AT2G35010 Solyc02g068510.2 708 296 228 202 363 338 228 361 143 448 228 507 64 162 107 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1P2G6_ARTAN) AT1G31040 Solyc02g068530.4 504 772 530 666 703 703 816 836 796 691 580 586 732 644 695 UDP-N-acetylglucosamine diphosphorylase 1 (AHRD V3.3 *** A0A1U8FKE1_CAPAN) AT2G35020 Solyc02g068540.2 1 1 2 0 5 8 0 5 13 12 26 10 2 5 1 leucine-rich repeat receptor protein kinase EMS1-like (AHRD V3.3 *** A0A2G3A6F6_CAPAN) Solyc02g068550.2 440 234 220 187 175 212 262 201 257 225 84 222 238 229 190 FAR1-related sequence 1 (AHRD V3.3 *** F4JU19_ARATH) Solyc02g068560.3 3538 2993 3096 3553 3611 4028 4099 4246 3096 3301 2917 3377 2199 3260 3072 Protein CHROMATIN REMODELING 4 (AHRD V3.3 *** A0A2G2XDA8_CAPBA) AT5G44800 Solyc02g068580.1 455 698 658 437 697 759 685 682 620 503 480 600 944 703 576 Histone acetyltransferase type B catalytic subunit (AHRD V3.3 *** A0A2G2W5B7_CAPBA) AT5G56740 Solyc02g068590.3 755 638 725 717 751 877 807 809 753 779 600 762 603 699 940 Potassium transporter (AHRD V3.3 *** A0A2G3D415_CAPCH) AT2G35060 Solyc02g068600.3 237 162 478 468 399 492 429 303 364 377 316 357 211 308 285 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1NQG8_ARTAN) Solyc02g068610.2 29 56 30 40 39 35 27 53 80 50 52 45 35 59 27 Ankyrin repeat-containing protein (AHRD V3.3 *-* A0A2U1PE49_ARTAN) AT5G35830 Solyc02g068615.1 13 24 6 27 17 28 22 20 23 9 39 19 15 23 17 Ankyrin repeat (AHRD V3.3 *-* A0A200RCA6_9MAGN) Solyc02g068620.1 0 1 0 1 0 0 2 1 1 0 0 0 0 2 0 Unknown protein Solyc02g068630.1 18 21 52 41 34 41 22 34 22 15 31 32 37 49 35 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QE75_9MAGN) AT3G47840 Solyc02g068640.3 626 639 597 672 661 635 657 586 613 600 569 651 963 933 975 Pyrroline-5-carboxylate reductase (AHRD V3.3 *** A0A328DV79_9ASTE) AT5G14800 Solyc02g068650.2 156 196 133 193 187 229 253 203 199 171 160 156 220 225 110 tRNA (guanine-N(7)-)-methyltransferase (AHRD V3.3 *** A0A2G3D3W0_CAPCH),Pfam:PF02390 AT5G24840 Solyc02g068660.3 268 149 173 113 79 76 66 48 129 104 188 130 155 109 123 wall-associated receptor kinase-like 10 (AHRD V3.3 *** A0A2I4G978_9ROSI) AT1G16120 Solyc02g068670.3 153 61 130 36 11 5 8 5 14 50 111 17 102 62 17 Ankyrin repeat (AHRD V3.3 *** A0A200R0Y6_9MAGN) AT3G18670 Solyc02g068680.1 95 33 57 11 0 1 0 6 26 22 103 26 37 67 35 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *-* Q9FIY8_ARATH) Solyc02g068690.3 505 516 525 568 546 684 636 602 565 801 560 669 462 550 571 Exostosin-like protein (AHRD V3.3 *** A0A2U1LYJ8_ARTAN) AT2G35100 Solyc02g068700.3 217 405 554 536 696 636 690 563 470 438 482 460 404 426 465 Histidine triad (HIT) protein (AHRD V3.3 *** A0A2U1PU92_ARTAN) AT1G31160 Solyc02g068710.3 162 110 103 115 93 129 99 120 112 97 76 87 164 122 162 Sulfiredoxin (AHRD V3.3 *** D2KKL9_PEA) AT1G31170 Solyc02g068720.3 2245 2402 2190 2725 3026 3078 3340 3196 2210 2355 2165 2537 2382 2307 2018 Protein NAP1 (AHRD V3.3 *** A0A2G3A6H3_CAPAN) AT2G35110 Solyc02g068730.3 1606 723 598 508 306 352 374 246 359 378 539 392 548 757 882 60 kDa chaperonin (AHRD V3.3 *** B2IXD2_NOSP7) AT5G18820 Solyc02g068740.3 209 810 905 957 987 1036 1110 830 599 401 643 470 947 843 881 Glycine cleavage system H protein (AHRD V3.3 *** A0A1U8FKG0_CAPAN) AT2G35120 Solyc02g068750.1 2023 2417 2018 1549 1891 1587 1532 2215 1749 2004 1713 2119 2423 2217 1742 tRNA N6-adenosine threonylcarbamoyltransferase (AHRD V3.3 *** A0A2H5UB77_RHIID) AT4G22720 Solyc02g068760.4 171 76 256 306 78 69 159 27 310 142 326 378 114 191 234 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A6F7_CAPAN) AT2G35130 Solyc02g068770.4 450 436 534 402 489 520 512 444 410 282 530 320 576 471 640 Ribosomal protein L30 (AHRD V3.3 *** A0A200QE96_9MAGN) AT5G55140 Solyc02g068780.4 501 361 459 430 385 497 540 362 362 315 406 332 367 460 662 Unknown protein Solyc02g068790.4 1159 1287 1244 1423 1298 1286 1401 1494 1153 1566 1129 1508 1287 1441 1146 Alpha 1,4-glycosyltransferase family protein (AHRD V3.3 *** A0A2U1LES8_ARTAN) AT4G19900 Solyc02g068793.1 0 4 1 0 0 1 2 0 0 1 0 3 0 0 5 Unknown protein Solyc02g150127.1 21 26 18 43 60 55 53 45 31 30 35 48 9 17 21 Unknown protein Solyc02g068797.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g068810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat (AHRD V3.3 *-* A0A200R0Y6_9MAGN) Solyc02g068820.3 342 243 294 135 84 107 98 120 190 240 345 119 350 153 133 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc02g150128.1 271 79 14 25 0 2 5 1 11 56 19 2 172 91 26 Lrr receptor-like serinethreonine-protein kinase fls2 (AHRD V3.3 *** A0A314LAY5_NICAT) Solyc02g068840.1 0 1 1 1 0 2 3 2 0 1 0 0 0 1 0 Unknown protein Solyc02g068850.1 0 0 3 0 0 1 0 0 1 0 0 0 0 0 0 Unknown protein Solyc02g068870.3 9 15 19 16 12 7 11 12 14 9 6 16 9 19 0 Unknown protein Solyc02g068880.2 0 0 0 0 0 4 1 0 1 2 0 0 0 1 0 LRR receptor-like serine/threonine-protein kinase EFR isoform X1 (AHRD V3.3 *-* A0A1S3YZB2_TOBAC) Solyc02g068890.3 127 167 121 230 148 205 194 166 175 104 140 134 150 208 145 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A6D5_CAPAN) AT4G19890 Solyc02g068900.3 1276 1279 860 1154 1097 873 980 956 1312 1219 1014 797 1226 1066 1460 Glutathione S-transferase (AHRD V3.3 *** A0A200QN08_9MAGN) AT4G19880 Solyc02g068910.3 750 1023 1355 1013 1656 1609 1723 1489 1179 909 1228 881 1062 980 1122 Trypsin family protein (AHRD V3.3 *** A0A2U1MFG3_ARTAN) AT5G45030 Solyc02g068920.3 3015 1202 936 1016 916 613 665 843 1209 1760 1214 1151 1119 1201 1426 lecithine cholesterol acyltransferase AT4G19860 Solyc02g068930.4 113 153 336 227 268 275 273 229 211 165 250 239 222 218 381 Cytochrome c6, chloroplastic (AHRD V3.3 *** A0A1U8FS80_CAPAN) AT5G45040 Solyc02g068960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger protein ZAT9-like (AHRD V3.3 --* XP_022857561.1) Solyc02g068970.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger protein 4 (AHRD V3.3 --* XP_006279345.1) Solyc02g068980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcriptional regulator SUPERMAN-like (AHRD V3.3 -** XP_023732550.1) Solyc02g068990.3 1074 729 759 649 910 978 910 807 680 812 788 709 748 677 716 Unknown protein Solyc02g069000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger protein 10-like (AHRD V3.3 -** XP_021644789.1) Solyc02g069010.4 317 329 447 463 462 438 497 391 452 329 365 350 317 424 525 Inositol-1-monophosphatase (AHRD V3.3 *** A0A1U8FS39_CAPAN) AT1G31190 Solyc02g069020.3 163 132 199 222 84 81 49 35 89 105 173 64 170 198 429 Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1PTN1_ARTAN) AT4G19840 Solyc02g069030.3 83 39 165 139 30 53 36 18 54 75 101 19 47 78 150 Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1PTN1_ARTAN) Solyc02g069040.4 3 1 14 7 5 5 5 3 12 11 14 1 6 5 5 Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1PTN1_ARTAN) Solyc02g069050.1 2 4 34 7 2 5 10 7 8 9 24 15 3 3 23 Transmembrane protein, putative (DUF594) (AHRD V3.3 *-* Q9FHI2_ARATH) Solyc02g069053.1 0 0 0 0 0 0 0 0 1 5 1 0 0 3 0 Phloem protein 2-like (AHRD V3.3 *** A0A200QPN3_9MAGN) Solyc02g069055.1 0 10 5 5 0 0 0 0 1 1 8 3 6 6 0 Phloem protein 2-like (AHRD V3.3 *** A0A200QPN3_9MAGN) AT1G10155 Solyc02g069057.1 0 3 0 3 0 0 0 0 9 2 0 5 0 5 0 Phloem protein 2-like (AHRD V3.3 *** A0A200QPN3_9MAGN) AT1G10155 Solyc02g069060.4 3 39 6 8 5 5 2 0 8 4 21 3 5 6 7 Phloem protein 2-like (AHRD V3.3 *** A0A200QPN3_9MAGN) Solyc02g069065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phloem protein 2-like (AHRD V3.3 *** A0A200QPN3_9MAGN) AT1G10155 Solyc02g069070.3 72 606 546 489 922 848 966 532 351 213 445 452 356 610 176 Ribonuclease H2 subunit C-like protein (AHRD V3.3 *** F4IVV8_ARATH) AT2G39440 Solyc02g069080.4 1297 1270 1284 1349 1704 1538 1496 1678 1601 1545 1072 1663 1469 1447 1146 Exocyst complex component EXO84C (AHRD V3.3 *** A0A1U8FJ63_CAPAN) AT1G10180 Solyc02g069090.3 5662 3990 3938 4781 4895 4639 4651 4528 4101 4611 4101 4518 3743 4028 4177 Cathepsin B-like cysteine proteinase (AHRD V3.3 *** Q40413_NICRU) AT4G01610 Solyc02g069100.4 1441 1354 1649 1197 810 816 770 828 2438 2342 1783 2006 2785 2287 1663 Cathepsin B-like cysteine proteinase (AHRD V3.3 *** Q6ST24_SOLTU) Solyc02g069110.4 367 974 1955 1396 1930 1786 1869 1755 3214 1554 1921 2760 988 1984 1480 Cathepsin B-like cysteine proteinase (AHRD V3.3 *** Q40413_NICRU) AT4G01610 Solyc02g069120.3 263 573 335 361 386 374 385 429 368 248 204 349 506 486 253 zinc finger protein ZPR1-like (AHRD V3.3 *** A0A2I4F7X7_9ROSI) AT5G22480 Solyc02g069130.3 307 317 317 445 333 336 384 378 358 397 288 374 261 297 303 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G2XYU6_CAPAN) AT4G19830 Solyc02g069140.3 67 24 39 41 4 14 2 3 13 34 2 27 9 37 37 Leucine--tRNA ligase, cytoplasmic (AHRD V3.3 *** A0A2G2XZ91_CAPAN) AT1G09620 Solyc02g069150.3 3401 2604 3205 2991 2481 2597 2465 2597 2451 2922 2742 2666 2743 2458 3476 Vesicle-associated membrane protein (AHRD V3.3 *** A0A1U8H291_CAPAN) Solyc02g069160.3 4105 3211 2859 2904 2785 2841 2887 3064 2494 3100 3092 2979 3223 3361 2953 RNA-binding protein (AHRD V3.3 *-* G2X1T0_VERDV) AT1G71800 Solyc02g069170.3 154 112 105 71 93 105 102 109 94 66 44 69 137 114 86 Transcription initiation factor TFIID subunit 8 (AHRD V3.3 *** A0A1J3F703_NOCCA) AT1G31240 Solyc02g069175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g069180.4 1107 902 1082 824 789 870 762 689 1263 920 1356 973 1336 1107 1224 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *-* A0A2U1LW40_ARTAN) AT3G12920 Solyc02g069190.4 63 43 0 0 0 0 0 0 10 112 12 14 0 5 0 iron-regulated transporter 2 AT4G19690 Solyc02g069200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 iron-regulated transporter 1 AT4G19690 Solyc02g069210.3 0 0 10 11 0 2 1 0 2 4 0 2 0 4 0 Zinc transporter protein (AHRD V3.3 *** A5BDR3_VITVI) AT4G19690 Solyc02g069220.2 205 102 212 204 96 149 129 76 106 145 135 134 120 122 146 Unknown protein Solyc02g069230.3 614 777 746 909 912 997 965 827 888 695 790 690 955 1042 949 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8FJ78_CAPAN) AT4G19670 Solyc02g069240.1 6 7 7 1 1 6 4 0 0 2 8 2 0 5 0 O-fucosyltransferase family protein (AHRD V3.3 *** S8EG27_9LAMI) AT3G05320 Solyc02g069250.4 195 128 144 89 41 53 32 42 69 108 94 45 258 272 158 Alcohol dehydrogenase superfamily (AHRD V3.3 *-* A0A200Q008_9MAGN) Solyc02g069260.3 6698 3550 3625 2910 2812 2513 2380 3089 3509 7251 3368 3639 5391 3136 2132 Argonaute2a AT1G31290 Solyc02g069270.2 101 61 57 30 30 56 66 37 54 63 51 78 31 51 26 Argonaute 2b AT1G31290 Solyc02g069280.2 0 0 0 5 1 8 7 7 4 5 0 5 1 1 9 Argonaute3 AT1G31290 Solyc02g069290.3 416 257 305 411 60 95 98 60 206 230 210 72 288 262 440 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A218W8P0_PUNGR) Solyc02g069300.1 2 0 21 0 0 0 0 1 2 1 0 3 2 0 8 pectinesterase inhibitor-like (AHRD V3.3 -** A0A1S3B9K9_CUCME) Solyc02g069310.3 1200 747 1152 677 369 396 433 377 939 955 984 479 1109 767 906 NIM1-like protein 1 AT5G45110 Solyc02g069320.1 264 316 196 155 190 138 128 158 151 140 182 119 207 207 153 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** A0A178V165_ARATH) AT4G19650 Solyc02g069330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cell wall / vacuolar inhibitor of fructosidase 1 (AHRD V3.3 *** A0A2I4GTK7_9ROSI) AT3G49330 Solyc02g069340.4 548 653 464 456 459 451 498 506 367 431 335 397 704 760 525 RNA 3'-terminal phosphate cyclase (AHRD V3.3 *** A0A200PQ43_9MAGN) AT5G22100 Solyc02g069350.4 371 385 268 407 428 496 485 475 331 398 321 363 348 351 462 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (AHRD V3.3 *** A0A2U1Q6S5_ARTAN) AT1G31300 Solyc02g069360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1LJN9_ARTAN) AT5G45120 Solyc02g069370.3 637 722 825 711 947 761 789 824 756 1059 800 687 1036 717 743 Ras-related protein Rab-5A (AHRD V3.3 *** A0A1U8FSC3_CAPAN) AT5G45130 Solyc02g069380.3 681 560 566 621 388 494 412 451 421 514 467 459 649 571 606 Membrane fusion protein Use1 (AHRD V3.3 *** A0A1P8AP56_ARATH) AT3G55600 Solyc02g069390.2 61 103 157 125 352 366 355 429 209 95 161 311 93 117 107 Myb-like domain-containing protein (AHRD V3.3 *** A0A2U1L859_ARTAN) AT1G31310 Solyc02g069400.3 533 435 645 539 655 688 588 602 563 562 526 549 490 515 454 Alpha/Beta hydrolase fold protein (AHRD V3.3 *** A0A2U1NSZ5_ARTAN) AT5G14930 Solyc02g069410.4 88 248 226 413 252 263 286 266 308 191 280 337 189 310 247 Haloacid dehalogenase-like hydrolase domain-containing protein (AHRD V3.3 *** A0A1J3HBG0_NOCCA) AT5G45170 Solyc02g069420.4 5 9 15 2 0 8 5 6 2 2 7 3 7 7 11 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A2G2Y2S2_CAPAN) Solyc02g069430.4 9 5 31 19 2 15 10 2 5 2 26 4 9 6 25 Phospholipid-transporting ATPase (AHRD V3.3 *-* A0A2G3D422_CAPCH) Solyc02g069440.3 7 9 15 15 27 32 30 23 11 3 8 18 13 21 26 LOB domain-containing protein 3 (AHRD V3.3 *** A0A1U8G035_CAPAN) AT1G31320 Solyc02g069450.3 209 696 348 507 1465 1372 1408 1558 728 696 422 663 341 297 346 Photosystem I reaction center subunit III, chloroplastic (AHRD V3.3 *** A0A1U8FJA0_CAPAN) AT1G31330 Solyc02g069460.3 1145 2429 1487 1925 3456 2973 3469 3951 2562 2351 1363 2238 1606 1415 1676 Photosystem I reaction center subunit III, chloroplastic (AHRD V3.3 *** A0A1U8FJA0_CAPAN) AT1G31330 Solyc02g069470.4 890 999 1173 1142 998 1042 982 880 1146 938 1633 1179 767 1165 882 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *** A0A2U1N0U6_ARTAN) Solyc02g069480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1KXQ2_ARTAN) Solyc02g069490.4 1238 14766 2381 6810 9715 8206 7718 9553 26391 16089 9673 26621 11017 11636 4299 Delta(24)-sterol reductase (AHRD V3.3 *** A0A2G2XDD5_CAPBA) AT3G19820 Solyc02g069500.1 66 114 141 99 186 238 181 136 118 99 145 136 153 165 105 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2Y2T3_CAPAN) AT4G21300 Solyc02g069510.1 535 545 845 918 428 407 233 305 389 633 361 1040 429 595 358 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A2G3D431_CAPCH) Solyc02g069520.2 1088 803 727 867 701 649 562 721 618 718 647 713 977 758 775 mediator of RNA polymerase II transcription subunit 9 (AHRD V3.3 *-* A0A1S4AG64_TOBAC) AT1G55080 Solyc02g069530.1 11 8 19 14 6 17 12 4 17 8 11 17 4 13 10 protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like isoform X2 (AHRD V3.3 *-* XP_019067789.1) Solyc02g069540.3 35 51 68 59 41 36 47 27 63 27 44 45 47 37 43 protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like isoform X1 (AHRD V3.3 *** A0A2I4G6S0_9ROSI) AT4G31805 Solyc02g069550.1 2 10 1 4 33 27 26 38 7 1 0 0 0 7 1 protein prune homolog isoform X1 (AHRD V3.3 *** A0A2I4DQP5_9ROSI) Solyc02g069560.3 78 591 700 838 1146 1402 1339 1416 653 418 732 1034 179 403 300 Protein CHUP1, chloroplastic (AHRD V3.3 *** A0A2G3D453_CAPCH) Solyc02g069570.3 242 394 365 342 430 540 451 480 388 214 235 358 354 395 302 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A1U8FUD9_CAPAN) AT1G30610 Solyc02g069580.3 2661 1830 3231 2279 1481 1694 1798 1327 2050 2287 2763 1999 2677 2707 3664 UDP-glucose 4-epimerase (AHRD V3.3 *** A0A1Y1ITM0_KLENI) AT1G30620 Solyc02g069585.1 1323 2617 2093 1997 3005 2300 2650 2781 2276 2195 1763 2218 3232 2591 1887 Coatomer subunit epsilon (AHRD V3.3 *** A0A1U8FJB3_CAPAN),Pfam:PF04733 AT1G30630 Solyc02g069600.3 4 11 22 31 33 43 18 43 21 5 25 10 5 9 38 Cytochrome P450 (AHRD V3.3 *** A0A200R9G0_9MAGN) Solyc02g069610.3 420 503 446 458 462 519 472 435 411 479 374 509 602 487 427 Got1/Sft2-like vescicle transport protein family (AHRD V3.3 *** A0A2U1KLQ9_ARTAN) AT5G01430 Solyc02g069620.4 177 270 347 387 404 375 434 303 294 132 268 247 155 307 365 Ribose 5-phosphate isomerase A (AHRD V3.3 *** A0A1Y1I8P0_KLENI) AT5G44520 Solyc02g069630.3 469 1030 890 1098 1646 1739 1711 1590 1268 707 885 971 586 738 810 Subtilisin-like protease (AHRD V3.3 *** A0A1J3H877_NOCCA) AT5G44530 Solyc02g069640.3 560 839 1084 1008 1115 1146 1127 1030 1036 933 880 954 1314 1120 1256 Gamma-soluble NSF attachment protein (AHRD V3.3 *** A0A2G3D4B3_CAPCH),Pfam:PF14938 AT4G20410 Solyc02g069650.3 1534 1286 1438 1592 1479 1572 1732 1639 1468 1461 1350 1475 1080 1493 1455 Unknown protein Solyc02g069670.4 308 609 588 893 978 1000 943 812 792 599 855 819 553 603 758 alpha-glucosidase (AHRD V3.3 *** A0A2I4FA71_9ROSI) Solyc02g069680.3 842 1907 2302 2203 4039 3773 3587 3847 2532 1927 2284 2932 1216 1832 1417 vacuolar protein sorting-associated protein 2 homolog 2 (AHRD V3.3 *** A0A2I4FA45_9ROSI) AT5G44560 Solyc02g069690.1 71 182 123 190 150 132 144 214 218 153 79 132 344 189 182 FAD-binding Berberine family protein (AHRD V3.3 *** A0A1P8AT94_ARATH) AT1G30760 Solyc02g069700.1 3 4 0 0 0 0 2 1 0 4 0 7 0 0 11 Unknown protein Solyc02g069710.4 176 172 214 197 163 186 188 171 183 208 201 197 186 203 164 Cation/calcium exchanger 4 (AHRD V3.3 *** A0A2G3A6Q7_CAPAN) AT1G54115 Solyc02g069715.1 33 11 5 14 23 17 14 21 25 30 8 13 13 17 2 Unknown protein Solyc02g069720.3 1364 974 1120 1034 916 963 844 811 959 1149 1071 913 1143 1036 1044 LSD1 zinc finger family protein (AHRD V3.3 *** F4JUW0_ARATH) AT4G20380 Solyc02g069730.3 0 6 1 6 0 0 0 6 0 0 0 0 0 2 0 CASP-like protein (AHRD V3.3 *** A0A2G3D4D7_CAPCH) AT5G44550 Solyc02g069740.4 51 76 94 59 26 44 29 52 38 49 72 68 44 51 33 Transcription factor jumonji (Jmj) family protein / zinc finger (C5HC2 type) family protein (AHRD V3.3 *** A0A2U1QN90_ARTAN) Solyc02g069750.3 121 135 143 125 92 113 74 102 109 82 75 119 188 154 125 Choline/ethanolamine kinase (AHRD V3.3 *** A0A2I0WMF4_9ASPA) AT1G74320 Solyc02g069760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1L356_ARTAN) Solyc02g069770.3 458 698 450 387 404 407 383 353 417 246 303 428 864 731 431 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1MQ79_ARTAN) AT4G05410 Solyc02g069780.3 1133 1135 1239 1538 1354 1591 1718 1189 1447 1151 1699 1173 935 1313 2010 SIT4 phosphatase-associated family protein (AHRD V3.3 *** F4I6B2_ARATH) AT1G30470 Solyc02g069790.3 1802 1823 1778 1642 1708 1597 1571 2071 1444 1796 1508 2035 1979 1777 1702 U2 snRNP auxiliary factor large subunit (AHRD V3.3 *-* A0A166WX29_9PEZI) AT1G30480 Solyc02g069800.1 877 1015 811 659 595 478 507 516 991 823 816 465 1726 1264 967 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1PVQ0_ARTAN) Solyc02g069810.3 86 42 118 47 29 23 19 32 30 45 32 39 56 53 46 Nucleic acid binding protein (AHRD V3.3 *** A0A2K3PHJ0_TRIPR) Solyc02g069820.3 320 492 795 682 754 932 804 736 584 413 547 524 628 635 535 kxDL motif protein (AHRD V3.3 *** AT3G29130.6) AT3G29130 Solyc02g069830.4 2228 1597 2277 2156 2335 2549 2480 2338 1519 1753 1663 2073 1802 1620 1387 Unknown protein Solyc02g069840.3 395 577 699 617 761 742 717 623 411 358 561 561 721 614 535 50S ribosomal protein L20 (AHRD V3.3 *** A0A2G2XDQ1_CAPBA) AT1G16740 Solyc02g069850.3 6773 13955 15116 11522 15837 16008 13641 14762 8328 8018 11899 10041 15961 12938 12406 40S ribosomal protein S25 (AHRD V3.3 *-* A0A2G3D4C4_CAPCH) AT2G21580 Solyc02g069860.4 1717 1697 337 1138 1650 1369 1209 1817 770 1279 384 1030 1335 739 557 Nuclear transcription factor Y subunit A-7 (AHRD V3.3 *** A0A2G3D4E1_CAPCH) AT1G30500 Solyc02g069870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g069880.4 1536 1065 1156 1123 1508 1647 1715 1381 860 975 1099 1028 768 678 668 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A1U8FSK4_CAPAN) Solyc02g069890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g069900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g069910.2 40 217 505 298 282 309 294 173 284 137 410 138 180 190 328 Unknown protein Solyc02g069920.4 161 209 225 360 346 452 444 327 274 261 284 229 121 254 337 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal (AHRD V3.3 *** A0A2G2XDL4_CAPBA) AT1G30520 Solyc02g069930.1 64 74 79 73 63 46 34 46 85 98 128 104 64 55 49 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9LFQ7_ARATH) Solyc02g069940.4 1172 886 815 697 751 693 833 706 732 715 675 782 870 894 733 WPP domain associated protein AT2G34730 Solyc02g069950.3 2178 1911 1684 1391 2058 2099 2060 2002 1519 1414 1418 1418 2287 1880 1856 KRR1 small subunit processome component (AHRD V3.3 *** A0A2G3DH49_CAPCH) AT5G08420 Solyc02g069960.4 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 NAC domain-containing protein (AHRD V3.3 *-* A0A2K3N8K8_TRIPR) Solyc02g069970.4 251 216 187 233 231 314 302 258 359 192 345 231 256 204 190 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3PS49_TRIPR) AT1G30570 Solyc02g069980.4 1025 712 646 844 728 974 875 584 562 816 856 659 626 713 823 ELM2 domain, Zinc finger, PHD-type, Zinc finger, CW-type, Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *-* A0A2U1QAI8_ARTAN) Solyc02g069990.1 8 2 0 1 0 0 0 0 2 3 0 4 2 5 19 Unknown protein Solyc02g070000.4 1206 2218 2681 2222 3811 3962 3991 3924 2639 2154 2242 3573 1924 2443 1600 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A061G8R7_THECC) AT4G20940 Solyc02g070010.1 223 88 119 109 80 94 89 95 150 140 95 104 191 147 142 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A6Q0_CAPAN) AT2G01860 Solyc02g070020.1 76 42 28 21 2 1 1 5 10 7 9 4 33 47 33 UDP-Glycosyltransferase superfamily protein (AHRD V3.3 *** A0A2U1N3R1_ARTAN) AT5G49690 Solyc02g070030.4 595 770 526 505 611 593 638 672 650 614 554 711 830 802 477 Small RNA 2'-O-methyltransferase-like (AHRD V3.3 *** A0A2S1CES1_PRUYE) AT4G20910 Solyc02g070040.1 67 133 357 60 70 58 54 69 133 62 520 156 134 137 197 ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2) (AHRD V3.3 *-* AT4G20880.1) AT5G44350 Solyc02g070050.3 552 1064 1469 1282 1416 1539 1462 1305 1275 1115 1659 1314 1086 1081 747 Fatty acid hydroxylase (AHRD V3.3 *** A0A200Q3T8_9MAGN) AT2G34770 Solyc02g150129.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g070060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1MQE5_ARTAN) AT4G20860 Solyc02g070070.1 35 27 22 69 0 0 0 3 17 26 10 7 18 76 282 FAD-binding Berberine family protein (AHRD V3.3 *** A0A1P8AT94_ARATH) AT1G30760 Solyc02g070080.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QGX7_ARTAN) Solyc02g070090.1 0 0 1 0 0 0 0 0 5 1 0 0 0 7 17 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1KT07_ARTAN) AT1G30700 Solyc02g070100.3 1512 1532 1430 1006 847 803 774 911 1048 830 969 1021 1839 1554 1292 RNA helicase DEAD7 AT4G34910 Solyc02g070110.1 5 1 6 6 0 0 0 0 3 3 12 3 3 13 38 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1LDC6_ARTAN) AT5G44440 Solyc02g070120.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A2U1MQE5_ARTAN) Solyc02g070130.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1LDC6_ARTAN) Solyc02g070140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein 90 (AHRD V3.3 -** XP_003553602.1) Solyc02g070150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A2U1MBD9_ARTAN) Solyc02g070160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1LDC6_ARTAN) Solyc02g070170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1LDC6_ARTAN) Solyc02g070180.3 0 0 0 9 0 0 2 0 0 0 0 0 0 0 5 FAD-binding Berberine family protein (AHRD V3.3 *** A0A1P8BFF2_ARATH) Solyc02g070190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A1P8BBH9_ARATH) Solyc02g070200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1LDC6_ARTAN) AT5G44440 Solyc02g070210.3 70 1552 1029 1393 2940 3015 2932 3562 1407 454 981 1553 122 670 670 Patellin-4 (AHRD V3.3 *** A0A2G2XDH3_CAPBA) AT1G30690 Solyc02g070220.3 92 134 175 186 113 90 191 93 108 84 129 110 125 156 185 Twinkle-like protein, chloroplastic/mitochondrial (AHRD V3.3 *-* A0A1J3IPL8_NOCCA) AT1G30660 Solyc02g070230.2 42 53 36 61 47 47 46 44 31 39 52 32 47 33 68 Twinkle-like protein, chloroplastic/mitochondrial (AHRD V3.3 *** A0A2G2XBQ5_CAPBA) Solyc02g070240.3 1283 1112 808 786 849 764 737 851 786 811 830 903 1221 1304 1046 Zinc finger transcription factor 17 AT1G30460 Solyc02g070250.4 508 496 662 552 564 572 561 523 471 517 674 514 551 509 639 Glycolipid transfer protein domain (AHRD V3.3 *** A0A200PSJ4_9MAGN) AT2G34690 Solyc02g070260.4 3692 4517 3573 3560 4710 4765 4599 5912 5386 4988 3185 4802 3126 4271 3848 Outer arm dynein light chain 1 protein (AHRD V3.3 *** A0A2U1P7A2_ARTAN) AT2G34680 Solyc02g070270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cationic amino acid transporter (AHRD V3.3 *** S8D7Y4_9LAMI) Solyc02g070280.3 581 344 208 83 27 32 32 52 143 438 127 98 852 330 170 Cationic amino acid transporter (AHRD V3.3 *** S8D7Y4_9LAMI) AT4G21120 Solyc02g070290.3 917 884 1118 1034 927 961 987 807 725 692 798 668 764 876 862 Cation-chloride cotransporter 1 (AHRD V3.3 *** A0A2G2XDT0_CAPBA) AT1G30450 Solyc02g070300.4 358 369 415 328 317 395 364 359 236 284 275 344 323 347 184 Protection of telomeres protein 1a (AHRD V3.3 *** A0A2I0WWR8_9ASPA) AT5G06310 Solyc02g070310.3 4830 7676 7952 5670 7653 7532 7714 6569 5925 3684 5940 4502 9283 7328 7348 60S ribosomal protein L32 (AHRD V3.3 *** A0A2G3D4E0_CAPCH) AT4G18100 Solyc02g070330.4 2478 5350 4253 3309 4077 3941 4206 4341 3218 2726 3177 3609 5734 4960 3437 40S ribosomal protein S4 (AHRD V3.3 *** A0A2G2WHB8_CAPBA) AT5G58420 Solyc02g070340.3 3855 8137 7049 6142 7650 7891 8493 7690 5407 4437 5916 6174 8800 8491 6182 40S ribosomal protein S4 (AHRD V3.3 *** A0A2G2WHB8_CAPBA) AT5G58420 Solyc02g070380.1 2 2 1 0 0 2 0 0 3 0 0 2 0 1 1 Disease resistance protein (AHRD V3.3 *-* A0A200PSC5_9MAGN),Pfam:PF18052 Solyc02g070385.1 65 47 139 122 63 67 76 29 39 40 84 35 61 124 226 Unknown protein Solyc02g070390.3 468 522 490 340 224 259 251 326 528 204 351 375 445 665 452 protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 (AHRD V3.3 *** A0A2I4GUX2_9ROSI) AT2G34640 Solyc02g070400.3 835 980 1488 1266 1436 1541 1522 1364 1145 1193 1304 1311 1231 1256 1008 Galactosyltransferase family protein (AHRD V3.3 *** A0A2U1PE75_ARTAN) AT4G21060 Solyc02g070410.2 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1M2V8_ARTAN) Solyc02g070420.2 48 69 211 125 101 86 63 38 101 61 219 44 67 65 210 transmembrane protein (AHRD V3.3 *-* AT2G34530.1) AT2G34530 Solyc02g070430.3 14 186 179 134 296 273 228 264 193 99 212 295 63 113 46 Gibberellin 2-oxidase 1 (AHRD V3.3 *** A7LCJ5_SOLTU) AT1G30040 Solyc02g070440.3 2089 3212 4342 4911 4947 4848 5641 4640 5449 4730 6114 6497 3770 3897 3905 Katanin p60 ATPase-containing subunit (AHRD V3.3 *** A0A1Y1IFT3_KLENI) AT2G34560 Solyc02g070450.2 30 28 123 65 96 114 71 53 51 97 104 59 71 49 151 Glucan endo-1,3-beta-glucosidase 11 (AHRD V3.3 *** A0A2G3A704_CAPAN) AT1G30080 Solyc02g070460.3 555 620 502 559 604 612 577 772 631 585 470 578 566 631 437 Cullin (AHRD V3.3 *** A0A200QC17_9MAGN) AT5G46210 Solyc02g070470.1 2081 2154 3404 2767 2065 2109 2105 1613 1738 2069 3494 1674 2683 2265 4142 transmembrane protein (AHRD V3.3 *** AT2G34585.1) AT2G34585 Solyc02g070480.4 1344 1136 1007 1159 1233 1202 1119 1266 1148 1334 1106 1212 996 946 884 F-box protein (AHRD V3.3 *-* A0A2G2XDN8_CAPBA) Solyc02g070490.4 94 143 115 127 146 160 150 168 96 119 153 98 109 46 115 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9FFW9_ARATH) AT5G38520 Solyc02g070510.3 629 1013 947 1053 1209 1320 1387 1434 1039 1077 978 1088 1212 1262 985 Proteasome subunit alpha type (AHRD V3.3 *** A0A218W7U7_PUNGR) AT3G14290 Solyc02g070520.3 338 419 469 377 362 451 395 350 389 309 377 331 465 474 451 alpha-1,2-Mannosidase (AHRD V3.3 *** A0A1U8FJR2_CAPAN) AT1G30000 Solyc02g070530.4 26 791 724 367 2392 2832 2748 2312 894 200 264 605 54 321 200 Potassium channel KAT1 (AHRD V3.3 *** A0A2G3ANB5_CAPAN) AT5G46240 Solyc02g070540.3 1627 4337 4088 2869 5690 4450 4001 5947 5613 3452 3310 4602 3823 3831 3280 DUF642 domain-containing protein (AHRD V3.3 *** A0A1Q3DKA7_CEPFO) AT1G29980 Solyc02g070550.3 5743 3448 4181 4261 4082 4254 3772 3733 4359 3906 4125 4029 3251 3626 4963 La-related protein 6A (AHRD V3.3 *** A0A2G2XDP4_CAPBA) AT5G46250 Solyc02g070560.3 212 138 221 241 166 187 208 187 169 212 147 211 187 208 162 Phospho-N-acetylmuramoyl-pentapeptide-transferase-like protein (AHRD V3.3 *** A0A2G2XE40_CAPBA) AT4G18270 Solyc02g070570.4 3484 4433 3790 2886 3158 3534 3394 3157 2557 2475 2503 2585 4738 4300 3888 40S ribosomal protein S14 (AHRD V3.3 *** A0A2G2YPH6_CAPAN) Solyc02g070580.1 330 585 552 529 745 802 717 765 872 481 629 581 385 417 246 sterol 22-desaturase AT2G34500 Solyc02g070600.3 224 242 245 336 553 507 443 671 269 196 257 695 188 348 99 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) Solyc02g070610.3 3 13 27 13 34 18 14 9 13 5 1 11 13 11 21 GDSL esterase/lipase (AHRD V3.3 *** A0A1J3J8D5_NOCCA) Solyc02g070620.4 488 485 617 685 1020 906 952 1195 339 482 455 863 165 475 108 F-box domain (AHRD V3.3 *** A0A200PSQ4_9MAGN) Solyc02g070630.3 1236 606 853 656 668 773 679 659 476 828 738 758 583 662 822 60S ribosomal protein L18a-like protein (AHRD V3.3 *** A0A2I4HA23_9ROSI) AT1G17080 Solyc02g070640.3 1697 4674 3396 2462 3622 3399 3498 3191 2643 1522 2676 2120 5832 4441 3375 60S ribosomal protein L18a (AHRD V3.3 *** A0A2G2WKJ7_CAPBA) AT3G14600 Solyc02g070650.2 944 2357 2077 1422 2210 2145 2027 1787 1273 857 1501 1223 2828 2356 2321 60S ribosomal protein L18a (AHRD V3.3 *** A0A2G2WKJ7_CAPBA) AT3G14600 Solyc02g070660.3 8 26 33 35 27 29 31 17 21 7 28 35 21 19 62 Cytochrome b561 domain-containing protein (AHRD V3.3 *** A0A1J3IXU1_NOCCA) AT2G30890 Solyc02g070670.4 894 1121 1091 1014 759 794 733 756 1364 1129 1060 1330 740 838 740 Urease accessory protein UreG-like (AHRD V3.3 *** A0A2K3MUD0_TRIPR) AT2G34470 Solyc02g070680.4 808 646 676 548 560 542 477 477 687 683 759 609 635 741 942 Cytochrom_B561 domain-containing protein (AHRD V3.3 *-* A0A1Q3BEM3_CEPFO) Solyc02g070690.1 4 8 6 4 6 8 12 14 3 5 8 8 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* O22783_ARATH) Solyc02g070700.3 39 98 30 80 133 77 83 128 81 57 61 120 63 101 50 WRC (AHRD V3.3 *** A0A200QU19_9MAGN) Solyc02g070705.1 37 25 47 17 20 42 34 14 29 27 63 6 46 42 52 LOW QUALITY PROTEIN: uncharacterized protein At2g34460, chloroplastic (AHRD V3.3 --* XP_021294069.1) Solyc02g070710.3 61 65 50 22 48 39 63 47 49 32 24 43 40 77 29 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q363_9MAGN) AT3G20730 Solyc02g070720.1 10 8 10 7 3 6 14 4 20 12 2 11 15 4 25 Unknown protein Solyc02g070740.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc02g070750.1 5 1 6 0 0 2 2 0 5 5 13 7 5 8 5 Disease resistance protein (AHRD V3.3 *-* A0A200Q3R7_9MAGN) AT1G52660 Solyc02g070755.1 1 8 0 2 8 4 9 4 5 1 8 7 3 8 6 Unknown protein Solyc02g070760.4 324 234 516 352 478 613 582 456 371 339 420 364 312 337 321 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1NQA9_ARTAN) AT2G34460 Solyc02g070770.3 291 490 556 491 595 631 642 542 580 441 572 490 452 499 698 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1NQA9_ARTAN) AT2G34460 Solyc02g070780.4 356 3051 2460 2472 3943 3516 3734 4333 2813 1899 1751 3017 2117 3332 882 DNA helicase (AHRD V3.3 *** A0A2G2XDX1_CAPBA) AT5G46280 Solyc02g070790.3 165 1037 567 996 1272 1009 940 1584 1017 732 579 1019 738 930 416 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** A0A2I4EJY8_9ROSI) AT5G46290 Solyc02g070800.2 1231 1212 3694 3282 1123 1053 1107 1230 5303 1303 3927 3709 1553 3384 3270 DUF561 domain-containing protein (AHRD V3.3 *** A0A1Q3DH97_CEPFO) Solyc02g070810.4 1504 1560 1433 1260 1434 1705 1527 1428 1089 1115 984 1358 1478 1512 1348 Nuclear pore complex protein (AHRD V3.3 *** A0A2G3D4U4_CAPCH) AT5G40480 Solyc02g070820.1 11 21 47 22 13 17 8 7 30 10 48 12 23 15 52 Avr9/Cf-9 rapidly elicited protein 180 (AHRD V3.3 *** Q9FQZ1_TOBAC) AT5G46295 Solyc02g070830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein SKIP23-like (AHRD V3.3 *** A0A2I4GFL5_9ROSI) Solyc02g070850.1 21 13 8 15 27 15 18 18 25 11 22 15 10 19 12 F-box/kelch-repeat protein At3g23880-like (AHRD V3.3 *-* XP_025884893.1) Solyc02g070860.4 546 316 282 344 257 323 364 311 298 379 403 300 274 308 408 tobamovirus multiplication protein 1-like (AHRD V3.3 *** A0A2I4EJZ3_9ROSI) AT3G59090 Solyc02g070870.4 199 151 126 167 180 125 148 167 157 166 226 172 189 219 227 mitochondrial inner membrane protease subunit 1-like (AHRD V3.3 *** A0A2I4HRQ8_9ROSI) Solyc02g070875.1 358 444 467 595 564 549 525 619 557 539 275 603 395 494 402 BnaA07g07520D protein (AHRD V3.3 *-* A0A078HZ87_BRANA) Solyc02g070880.1 1420 1778 2332 2354 1883 2560 2360 1930 2298 1609 2312 1738 1871 2100 2096 Helix-loop-helix DNA-binding AT1G29950 Solyc02g070890.3 66 87 200 73 104 120 100 205 219 114 457 28 16 29 9 Flagellin Sensing 2 AT5G46330 Solyc02g070900.1 299 232 226 212 165 154 158 166 150 231 142 274 221 234 157 Unknown protein Solyc02g070920.3 341 356 91 306 368 316 405 380 321 253 90 234 307 145 94 Unknown protein Solyc02g070910.3 12 15 27 23 10 15 14 11 19 15 13 14 17 22 20 Receptor kinase (AHRD V3.3 *** H2AKU7_ARATH) AT5G46330 Solyc02g070930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g070940.1 13304 37525 5800 19314 60274 46629 51771 59528 22110 31164 4625 19059 15148 5419 3141 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3A7J8_CAPAN) AT1G29930 Solyc02g070950.1 443 1654 490 957 519 418 505 426 1414 1107 308 707 700 547 505 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3A7J8_CAPAN) AT1G29930 Solyc02g070970.1 347 1254 380 556 1861 1673 1613 1484 1133 588 157 465 308 196 95 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3A7J8_CAPAN) AT1G29930 Solyc02g070980.1 135 1217 200 278 988 838 885 730 727 428 52 215 197 66 78 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *-* A0A2G3A7J8_CAPAN) AT1G29930 Solyc02g070990.1 199 645 102 187 209 147 202 153 668 376 76 117 183 64 71 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3A7J8_CAPAN) AT1G29930 Solyc02g071000.1 274 604 138 307 282 229 263 201 696 476 132 206 250 162 197 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3A7J8_CAPAN) AT1G29930 Solyc02g071010.1 1845 4346 1392 2871 6546 5487 6157 6157 5036 6569 1577 3154 1566 1206 1500 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3A7J8_CAPAN) AT1G29930 Solyc02g071020.3 5 7 18 7 0 8 5 4 0 4 0 7 13 0 0 Unknown protein Solyc02g071030.2 21742 20202 7971 21180 38379 30784 32929 31210 21005 27295 9602 18347 12555 9688 26765 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3A7J8_CAPAN) AT1G29930 Solyc02g071040.3 482 474 727 588 418 517 494 466 581 460 564 540 555 558 651 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** A0A314LCS0_NICAT) AT4G18240 Solyc02g071050.4 10 15 25 42 17 26 22 22 22 34 14 35 13 2 14 Purine permease (AHRD V3.3 *** A0A2P5DL88_TREOI),Pfam:PF16913 Solyc02g071060.3 127 218 182 158 156 120 114 189 305 291 227 284 193 160 89 Purine permease (AHRD V3.3 *** A0A2P5DL88_TREOI),Pfam:PF16913 Solyc02g071070.3 0 0 1 1 0 1 0 2 0 0 0 1 0 0 0 Cation/H(+) antiporter 16 (AHRD V3.3 *** A0A2G2XDT2_CAPBA) Solyc02g071080.3 13 60 56 157 57 63 68 47 91 29 59 67 32 63 9 Purine permease (AHRD V3.3 *** A0A2U1LZ22_ARTAN),Pfam:PF16913 Solyc02g071090.3 164 118 90 161 71 61 39 65 103 156 72 149 44 57 130 Purine permease (AHRD V3.3 *** A0A2U1LZ22_ARTAN),Pfam:PF16913 Solyc02g071100.3 118 230 109 258 127 125 73 152 189 202 66 234 97 100 209 Purine permease (AHRD V3.3 *** A0A2U1LZ22_ARTAN),Pfam:PF16913 Solyc02g071110.3 64 76 70 99 52 115 83 80 64 67 68 65 31 29 41 Purine permease (AHRD V3.3 *** A0A2R6Q6Y9_ACTCH),Pfam:PF16913 AT4G18210 Solyc02g071120.3 625 1110 1090 1149 1145 1325 1372 1218 1218 1097 854 1103 1175 1055 913 O-acetyltransferase family protein (AHRD V3.3 *** A0A2U1PD69_ARTAN) AT2G34410 Solyc02g071130.4 59 30 12 29 1 4 3 1 116 22 42 23 18 18 51 WRKY transcription factor 71 AT1G29860 Solyc02g071140.3 563 310 184 304 243 266 218 341 313 470 193 346 257 273 250 Two-pore potassium channel 3 (AHRD V3.3 *** A0A2G2XE18_CAPBA) AT4G18160 Solyc02g071150.3 2720 2338 3045 2248 2194 2289 2144 1931 2169 1802 2703 1828 2940 2491 2921 Double-stranded DNA-binding family protein (AHRD V3.3 *** B4FN06_MAIZE) AT1G29850 Solyc02g071160.4 567 893 649 918 1183 941 1043 1322 764 1146 745 849 745 601 726 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* Q9M144_ARATH) AT1G29790 Solyc02g071170.3 842 946 1552 1173 1550 1753 1584 1219 894 989 1379 1044 914 990 1167 Coatomer subunit zeta-2 (AHRD V3.3 *** A0A2G3A7H8_CAPAN) AT1G60970 Solyc02g071180.3 4437 3516 2174 2313 2646 2517 2623 3384 2337 3101 1929 2674 3138 2957 1817 DUF1296 domain-containing protein (AHRD V3.3 *** A0A1Q3CH94_CEPFO) AT1G29370 Solyc02g071190.4 359 208 273 215 211 174 200 171 156 217 253 203 138 187 242 Carboxyl-terminal-processing protease-like protein (AHRD V3.3 *** A0A2K3PAE2_TRIPR) AT5G46390 Solyc02g071200.4 248 383 555 836 465 437 495 285 280 643 746 247 260 336 449 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* A0A1P8AUE5_ARATH) AT1G29380 Solyc02g071210.3 939 600 666 937 731 756 845 702 634 987 691 743 506 696 1076 Cold-regulated inner membrane protein 2, chloroplastic (AHRD V3.3 *** A0A2G3D4Q0_CAPCH) AT1G29390 Solyc02g071220.3 165 292 220 458 391 457 328 226 935 247 389 124 580 883 434 type-A response regulator2 Solyc02g071240.3 1362 1115 808 1101 793 881 1011 787 916 1011 1119 973 725 975 977 Pre-mRNA-processing factor 39-like protein (AHRD V3.3 *-* A0A2K3NW85_TRIPR) Solyc02g071250.3 2922 1585 1536 1567 935 1049 1023 920 1243 1691 1404 1067 1476 1472 1466 CTD small phosphatase-like protein 2 (AHRD V3.3 *** A0A2I4EJV3_9ROSI) AT5G46410 Solyc02g071260.3 887 862 586 909 955 1098 1104 1099 988 901 622 1012 608 702 682 Phytochrome (AHRD V3.3 *** A0A2G2XE21_CAPBA) AT4G18130 Solyc02g071270.3 2041 1425 1225 1446 1329 1386 1680 1291 1190 1233 1454 1179 1192 1338 1625 Protein MEI2-like 5 (AHRD V3.3 *** A0A2G3A7K3_CAPAN) AT1G29400 Solyc02g071280.3 317 203 199 202 123 177 177 155 197 126 150 162 203 274 235 Ribosome maturation factor RimM (AHRD V3.3 *** A0A1J3G163_NOCCA) AT5G46420 Solyc02g150130.1 476 670 755 549 473 584 710 398 307 233 571 250 982 890 762 60S ribosomal protein L32 (AHRD V3.3 *** A0A2G2XE07_CAPBA) Solyc02g071290.1 2 0 1 4 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g071300.1 52 35 25 39 20 24 24 43 24 5 15 29 47 28 13 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3D4N1_CAPCH) AT5G46460 Solyc02g071310.3 72 62 193 125 79 117 60 47 67 76 71 39 27 75 113 Awpm-19-like family protein (AHRD V3.3 *** A0A2K3KYB6_TRIPR) AT1G29520 Solyc02g071320.4 1343 1374 1092 1216 926 1206 1171 1016 1158 908 906 971 1356 1107 1114 Unknown protein Solyc02g071330.4 467 692 623 528 805 720 773 793 566 494 536 573 765 611 498 SH3 domain-containing protein (AHRD V3.3 *** A0A2U1QNC4_ARTAN) AT4G18060 Solyc02g071340.2 1 0 0 0 6 1 2 2 5 2 2 4 0 0 0 ABC transporter B family member 11 (AHRD V3.3 *** A0A2G2XDY2_CAPBA) AT4G18050 Solyc02g071350.3 11 8 2 3 1 2 0 0 6 2 14 4 11 23 38 ABC transporter B family member 9 (AHRD V3.3 *** A0A2G3A7K1_CAPAN) AT4G18050 Solyc02g071360.4 209 186 214 140 96 97 86 73 210 200 263 136 359 202 125 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4I629_ARATH) AT1G17020 Solyc02g071370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein SRG1 (AHRD V3.3 *-* A0A2G3BQV4_CAPCH) Solyc02g071375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc02g071380.2 176 100 12 85 2 4 1 1 31 28 3 14 51 9 16 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4I629_ARATH) AT1G17020 Solyc02g071383.1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc02g071387.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc02g071400.3 14 16 13 10 19 15 25 14 25 9 10 16 15 11 40 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4I629_ARATH) AT1G17020 Solyc02g071410.3 54 37 62 19 29 21 20 25 34 38 105 51 48 37 19 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9SB33_ARATH) AT4G25310 Solyc02g071420.4 0 0 0 0 2 0 0 1 0 0 0 2 1 0 5 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1PS98_ARTAN) Solyc02g071430.3 89 20 25 1 0 1 3 0 7 71 46 3 23 32 114 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4I629_ARATH) AT1G17020 Solyc02g071435.1 6 1 1 8 0 0 0 0 0 1 6 5 9 0 15 mechanosensitive ion channel protein 8-like (AHRD V3.3 --* XP_004238626.1) Solyc02g071440.3 15 9 20 0 3 4 9 7 10 8 21 18 10 11 1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9SB33_ARATH) AT4G25310 Solyc02g071450.3 303 344 251 251 354 306 292 327 363 317 233 321 503 346 293 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9SB33_ARATH) AT4G25310 Solyc02g071460.2 2 1 3 6 0 9 3 4 0 0 11 9 6 6 0 hypothetical protein (AHRD V3.3 *-* AT3G57450.1) AT3G57450 Solyc02g071470.4 11 4 0 0 0 1 0 3 0 0 0 1 0 6 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9SB33_ARATH) AT4G25310 Solyc02g071480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9SB33_ARATH) AT4G25310 Solyc02g071490.4 2 0 0 0 1 11 6 1 3 1 0 0 2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9SB32_ARATH) AT4G25310 Solyc02g071500.2 43 74 74 59 96 56 53 31 56 13 57 29 114 71 33 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9SB33_ARATH) AT4G25310 Solyc02g071510.3 2633 1597 1295 1108 969 900 885 831 1272 1587 1336 1293 1321 1401 1614 Transcription factor GTE12 (AHRD V3.3 *** A0A2G3BQT5_CAPCH) Solyc02g071520.3 144 156 234 170 279 236 256 215 203 152 206 240 218 177 181 Bidirectional sugar transporter SWEET (AHRD V3.3 *** M1AAY0_SOLTU) Solyc02g071530.2 50 268 335 329 429 464 476 444 303 177 276 313 196 351 186 Exonuclease 1 (AHRD V3.3 *** A0A2G3A7F7_CAPAN) AT1G29630 Solyc02g071535.1 0 0 0 0 0 0 1 3 0 0 0 1 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc02g071560.4 2 5 0 0 0 0 0 0 0 2 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** A0A2I0VHD6_9ASPA) Solyc02g071570.4 250 203 182 200 207 198 191 167 190 132 187 167 168 209 236 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G3A7D3_CAPAN) AT4G18975 Solyc02g071580.4 91 267 232 281 384 333 321 385 374 202 228 491 101 235 116 Subtilisin-like protease SBT5.3 (AHRD V3.3 *** A0A2G2XF91_CAPBA) AT5G45650 Solyc02g071590.3 83 154 133 255 185 227 176 200 172 138 133 212 121 239 142 Trehalose-6-phosphate synthase (AHRD V3.3 *** D7KVC5_ARALL) Solyc02g071600.4 436 426 488 428 472 508 526 452 281 357 421 404 391 356 226 adenine phosphoribosyltransferase (AHRD V3.3 *** AT5G45660.1) AT5G45660 Solyc02g071610.3 496 888 1114 958 417 464 394 460 1433 1010 1569 857 575 632 851 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2XF69_CAPBA) AT5G45670 Solyc02g071620.3 167 229 648 287 41 37 50 54 368 445 1518 150 134 162 460 GDSL-motif lipase/hydrolase family protein 1 AT1G29670 Solyc02g071630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g071640.3 121 76 67 79 42 55 56 37 49 59 81 42 82 82 72 GDSL esterase/lipase (AHRD V3.3 *-* A0A2G3A7C5_CAPAN) Solyc02g071660.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g071670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g071680.1 76 116 52 101 47 33 68 36 23 30 64 28 39 89 65 GDSL esterase/lipase (AHRD V3.3 *-* A0A2G3A7C5_CAPAN) Solyc02g071690.2 6 0 10 1 7 5 4 0 0 0 2 0 0 3 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3A7C5_CAPAN) Solyc02g071700.3 816 4723 1834 2317 4209 3368 4235 4373 13874 4453 3344 7057 3232 3894 2334 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3A7C5_CAPAN) Solyc02g071710.3 200 2278 1522 2030 2147 1591 1389 2628 8443 2980 7490 8552 4372 3783 2985 GDSL esterase/lipase At1g29670-like (AHRD V3.3 *** A0A1U8FLP2_CAPAN) Solyc02g071720.2 27 274 263 184 227 190 210 246 733 318 672 831 245 300 155 GDSL esterase/lipase At1g29670-like (AHRD V3.3 *** A0A1S3XHA6_TOBAC) Solyc02g071730.4 2226 1248 1519 1190 260 370 130 211 288 793 127 1097 487 754 483 Tomato AGAMOUS 1 AT4G18960 Solyc02g071740.3 1124 713 1024 668 609 522 537 576 812 1141 687 597 811 717 756 MAP kinase kinase kinase 16 AT4G18950 Solyc02g071750.3 191 143 136 183 111 93 104 113 239 184 171 166 126 167 171 cyclic phosphodiesterase-like (AHRD V3.3 *** A0A1S4BIY5_TOBAC) AT4G18930 Solyc02g071760.4 28 0 0 0 0 0 0 0 0 5 0 0 0 4 6 oil body-associated protein 2A-like (AHRD V3.3 *** A0A2I4FEE8_9ROSI) AT1G29680 Solyc02g071770.3 34 15 46 30 8 6 22 6 30 18 6 32 45 65 195 oil body-associated protein 2A-like (AHRD V3.3 *** A0A2I4FEE8_9ROSI) AT5G45690 Solyc02g071780.3 409 418 986 604 426 505 545 519 576 575 616 466 471 477 413 MACPF domain-containing protein (AHRD V3.3 *** A0A1Q3CKD2_CEPFO) AT1G29690 Solyc02g071790.3 33 60 67 45 22 17 10 11 105 57 51 58 68 55 34 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *-* G7KRB1_MEDTR) Solyc02g071800.3 2286 2951 4056 3098 1495 1525 1813 1029 2786 3016 5603 3496 3643 3965 7048 Protein kinase domain (AHRD V3.3 *** A0A200QIY1_9MAGN) Solyc02g071810.4 253 323 509 315 293 317 340 248 383 158 513 328 208 347 400 Protein kinase domain (AHRD V3.3 *** A0A200QV78_9MAGN) Solyc02g071820.4 3339 1956 2996 3256 51 114 154 22 4575 2340 4695 1010 2824 4810 3835 LRR_1 domain-containing protein/Pkinase_Tyr domain-containing protein/Malectin domain-containing protein (AHRD V3.3 *** A0A1Q3CJY9_CEPFO) Solyc02g071830.3 81 91 127 96 192 256 269 187 112 73 109 75 43 76 125 plant/protein (DUF810) (AHRD V3.3 *-* AT5G06970.1) Solyc02g071840.1 3 1 1 2 2 3 6 3 1 2 5 1 2 0 10 Unknown protein Solyc02g071850.1 3 0 7 6 1 1 3 1 0 0 18 0 6 3 6 Unknown protein Solyc02g071860.4 1269 1096 1049 1297 1511 1630 1536 1309 1120 968 951 1045 804 888 1023 LRR_1 domain-containing protein/Pkinase_Tyr domain-containing protein/Malectin domain-containing protein (AHRD V3.3 *** A0A1Q3CJY9_CEPFO) Solyc02g071870.4 1128 637 884 729 441 642 651 438 591 651 1066 660 672 787 810 Protein kinase domain (AHRD V3.3 *** A0A200QV78_9MAGN) AT1G29750 Solyc02g071880.3 977 969 1237 1136 993 1109 1257 805 973 721 1634 945 823 1185 2205 Protein kinase domain (AHRD V3.3 *** A0A200QV78_9MAGN) AT1G29750 Solyc02g071890.3 696 682 541 577 601 634 671 652 596 505 404 478 725 686 586 Histidinol dehydrogenase (AHRD V3.3 *** O48933_NOCGO) AT5G63890 Solyc02g071900.3 204 133 195 174 118 157 141 114 107 159 249 115 177 151 178 Adipose-regulatory protein (Seipin) (AHRD V3.3 *** A0A2U1QJP7_ARTAN) AT1G29760 Solyc02g071910.1 9 4 7 0 1 0 2 0 3 1 0 0 0 0 1 NOD26-like intrinsic protein 2.2 Solyc02g071920.3 420 188 267 221 102 93 75 82 202 202 292 164 200 133 209 NOD26-like intrinsic protein 1.2 AT4G18910 Solyc02g071930.2 34 281 300 327 533 552 495 731 281 159 151 453 47 140 73 Ctd small phosphatase-like protein (AHRD V3.3 *** A0A2K3M2Z3_TRIPR) AT5G45700 Solyc02g071940.1 30 40 92 104 99 132 131 95 51 36 96 54 73 77 40 BnaC03g59480D protein (AHRD V3.3 *-* A0A078H9Y5_BRANA) Solyc02g071950.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g071960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g071970.1 5 5 1 5 0 0 0 0 0 0 0 0 4 2 9 N66 matrix protein (AHRD V3.3 *** XP_004233072.1) Solyc02g071980.3 392 266 365 251 251 329 280 244 300 329 358 313 253 339 293 RING/FYVE/PHD-type zinc finger family protein (AHRD V3.3 *** Q84WW7_ARATH) AT1G29800 Solyc02g071990.3 2706 2106 2743 2337 2168 1901 1750 2054 1483 2972 2086 2278 1685 2328 1927 BES1/BZR1 (AHRD V3.3 *** A0A2K3PP13_TRIPR) AT1G78700 Solyc02g072000.3 386 191 295 167 72 83 70 39 116 184 245 93 363 202 281 Heat shock transcription factor (AHRD V3.3 *** Q9M597_MEDSA) AT4G18880 Solyc02g072010.3 15 56 27 60 43 42 35 86 32 35 28 57 40 69 17 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XEC7_CAPBA) Solyc02g072020.3 14 27 34 49 36 36 35 34 31 29 46 41 54 22 34 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XEC7_CAPBA) Solyc02g072030.1 4 12 21 22 16 31 18 9 20 6 18 13 16 20 5 ovate family protein 5 AT4G18830 Solyc02g072040.3 3 2 1 8 0 0 0 0 2 0 1 0 0 0 0 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2) AT2G47010 Solyc02g072050.2 8 24 30 15 16 24 16 23 5 10 10 41 10 11 24 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2) AT2G47010 Solyc02g072060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heat shock transcription factor (AHRD V3.3 *-* A0A1Y1I763_KLENI) Solyc02g072070.4 31 17 19 8 1 7 11 9 20 13 20 6 33 27 7 Lectin-domain receptor-like kinase (AHRD V3.3 *** G4XXY5_NICAT) Solyc02g072080.1 803 641 741 449 344 389 352 260 470 371 1779 473 415 507 897 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A1E0Y2_SOLTU) AT1G29340 Solyc02g072090.2 636 1283 1235 1077 1742 2022 2044 2047 1601 764 1034 1411 911 1155 857 DNA polymerase III gamma-tau subunit (AHRD V3.3 *** E5GC26_CUCME) AT4G18820 Solyc02g072100.3 121 132 194 161 183 189 185 139 150 145 268 120 166 125 160 Ubiquitin domain-containing protein (AHRD V3.3 *** A0A2U1KFN7_ARTAN) AT1G53400 Solyc02g072105.1 398 688 574 567 609 545 584 656 570 431 319 584 780 803 476 Dihydroorotase (AHRD V3.3 *** A0A1U8FT91_CAPAN) AT4G22930 Solyc02g072120.3 57 129 147 124 151 189 188 176 141 175 141 207 124 124 135 ER lumen protein-retaining receptor (AHRD V3.3 *** A0A1U8FK40_CAPAN) AT1G29330 Solyc02g072130.3 6312 6861 5129 4741 5446 4928 4559 6403 5544 7211 4283 6842 7099 6090 4801 Protein transport protein Sec61 subunit alpha (AHRD V3.3 *** A0A1U8FK13_CAPAN) Solyc02g072140.1 603 1015 1442 939 1777 1775 1506 1510 1267 758 1091 944 1014 1089 645 DUF641 domain-containing protein (AHRD V3.3 *** A0A1Q3APE9_CEPFO) AT1G29300 Solyc02g072150.3 1229 306 451 313 391 427 391 347 288 852 846 251 212 225 213 Trehalose-6-phosphate synthase (AHRD V3.3 *** E5GC29_CUCME) AT1G06410 Solyc02g072160.4 1382 1126 589 962 1237 1396 1482 1482 1325 1251 706 950 973 732 683 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1LDJ7_ARTAN) AT4G18810 Solyc02g072170.3 30 11 9 19 17 15 10 5 12 14 47 12 15 30 18 hypothetical protein (AHRD V3.3 --* AT4G15140.1) Solyc02g072180.3 234 698 745 747 793 890 827 761 699 491 601 602 779 767 647 RAB GTPase (AHRD V3.3 *** A0A2U1Q460_ARTAN) AT4G18800 Solyc02g072190.4 14 17 31 8 44 61 30 36 32 11 29 20 11 13 47 WRKY transcription factor 79 AT1G29280 Solyc02g072210.1 118 84 132 27 3 16 11 13 17 32 133 24 71 57 124 hypothetical protein (DUF1685) (AHRD V3.3 --* AT1G05870.9) Solyc02g072220.1 28 92 22 73 171 157 106 128 30 24 42 39 48 18 113 DUF1685 family protein (AHRD V3.3 *-* AT2G42760.1) Solyc02g072230.3 506 387 314 431 345 342 412 345 314 338 337 384 358 442 413 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1NCE8_ARTAN) AT5G45760 Solyc02g072240.3 8 147 84 132 118 74 87 106 85 128 102 76 26 104 249 Cellulose synthase (AHRD V3.3 *** K4B8J8_SOLLC) AT4G18780 Solyc02g072250.1 6 31 26 49 13 40 31 21 20 45 52 4 28 19 22 Leucine-rich repeat family protein (AHRD V3.3 *** E5GC33_CUCME) AT4G18760 Solyc02g072260.4 452 315 190 204 438 349 313 371 383 275 157 282 345 217 138 Rho termination factor (AHRD V3.3 *** A0A200QXF1_9MAGN) AT4G18740 Solyc02g072270.3 55 50 69 55 49 62 39 29 27 30 75 32 82 61 45 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** B6SN54_MAIZE) Solyc02g072280.1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc02g072290.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc02g072300.4 4810 4327 4653 4287 4389 4869 4801 4565 4038 5117 5065 4816 4408 3999 4415 SHAGGY-like kinase (AHRD V3.3 *** N0A047_WHEAT) AT4G18710 Solyc02g072310.3 78 71 94 78 86 93 97 63 90 35 39 82 58 76 94 Protein NSP-INTERACTING KINASE 1 (AHRD V3.3 *** A0A2G3A7N6_CAPAN) Solyc02g072320.1 43 18 59 41 54 93 61 39 37 43 43 62 25 40 45 Protein NSP-INTERACTING KINASE 1 (AHRD V3.3 *-* A0A2G3A7N6_CAPAN) Solyc02g072330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc02g072340.1 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 Subtilisin-like protease (AHRD V3.3 *-* Q9LWA3_SOLLC),Pfam:PF17766 AT5G59110 Solyc02g072350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc02g072370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc02g072400.1 0 0 0 2 0 2 0 0 10 4 10 0 1 0 0 LRR receptor-like serine/threonine-protein kinase EFR (AHRD V3.3 *** A0A1S3YR00_TOBAC) Solyc02g072405.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g072410.1 1 5 0 0 0 0 0 0 0 0 0 0 2 0 0 Unknown protein Solyc02g072420.1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3LAF5_TRIPR) Solyc02g072423.1 0 0 0 0 7 1 1 3 1 0 6 0 4 0 0 F-box protein (AHRD V3.3 *-* A0A2K3NXX3_TRIPR) Solyc02g072427.1 4 0 7 2 0 0 1 1 0 0 0 1 0 0 0 Unknown protein Solyc02g072440.4 91 103 155 214 161 170 200 159 140 117 144 117 111 89 203 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc02g072450.4 47 90 99 108 127 153 157 106 91 109 70 109 38 88 105 Unknown protein Solyc02g072470.4 222 88 51 38 0 0 1 0 13 49 39 31 46 92 50 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc02g072480.4 15 13 2 2 0 0 0 0 0 0 1 0 7 3 17 LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR) Solyc02g072490.3 4 17 7 34 16 13 19 7 16 23 28 14 0 17 27 O-fucosyltransferase (AHRD V3.3 *** A0A2P5EP10_TREOI) AT1G29200 Solyc02g072500.3 193 638 511 932 1290 1293 1171 1550 706 524 548 1017 250 519 406 Nucleobase-ascorbate transporter 7 (AHRD V3.3 *** A0A1U8FKB3_CAPAN) AT2G34190 Solyc02g072510.3 553 566 492 529 442 519 569 516 564 492 457 507 726 634 515 transcriptional regulator family protein (AHRD V3.3 *-* AT1G29220.1) AT1G29220 Solyc02g072520.3 1178 1095 1025 931 924 877 860 935 990 1266 1056 895 1273 1109 858 Concanavalin A-like lectin/glucanase, subgroup (AHRD V3.3 *** A0A2U1KZV6_ARTAN) AT5G45800 Solyc02g072530.3 922 764 565 624 621 734 587 706 848 812 566 628 699 670 761 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G3A7N9_CAPAN) AT4G18700 Solyc02g072540.3 150 167 20 245 84 69 51 81 138 106 19 17 110 28 125 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2XE54_CAPBA) AT5G45820 Solyc02g072550.1 10 3 0 5 0 0 0 0 0 2 0 1 1 0 19 Delay of germination 1 (AHRD V3.3 *-* C8CJG9_BRARP) Solyc02g072560.1 40 22 1 35 3 0 0 0 5 2 0 0 11 10 31 Delay of germination 1 (AHRD V3.3 *-* A0A2H1ZE87_ARATH) Solyc02g072570.2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Transcription factor TGA like domain (AHRD V3.3 *** A0A200Q9U0_9MAGN) AT4G18690 Solyc02g073570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor TGA like domain (AHRD V3.3 *** A0A200Q9U0_9MAGN) AT4G18690 Solyc02g073580.1 3 3 24 0 0 0 0 0 0 1 7 3 2 4 6 transcription factor TGA6-like (AHRD V3.3 *** A0A2I4DJ54_9ROSI) AT4G18650 Solyc02g076630.1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 17 Unknown protein Solyc02g076635.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc02g076640.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Transcription factor TGA like domain (AHRD V3.3 *-* A0A200Q9W5_9MAGN) Solyc02g076650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor TGA like domain (AHRD V3.3 *-* A0A200Q9W5_9MAGN) Solyc02g076660.3 1117 631 611 630 678 811 745 741 601 874 630 821 663 528 369 Protein male discoverer 2 (AHRD V3.3 *** A0A1J6HUC9_NICAT) AT5G45840 Solyc02g076670.3 62 62 66 62 17 17 23 18 56 34 69 29 43 40 94 Myb domain, Homeodomain-like protein (AHRD V3.3 *** A0A2U1Q384_ARTAN) AT2G42660 Solyc02g076680.3 528 1383 1002 1511 1629 1725 1516 1809 1397 832 889 1210 1581 1556 1437 DUF688 domain-containing protein (AHRD V3.3 *** A0A1Q3BIV2_CEPFO) Solyc02g076690.3 558 419 1309 1460 460 566 694 402 1319 792 1377 1206 413 934 1303 Cysteine protease CP14 (AHRD V3.3 *** T2BRA8_TOBAC) Solyc02g076700.1 25 39 6 23 4 17 21 24 33 16 8 26 17 28 36 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PME2_9MAGN) Solyc02g076710.3 53 53 87 46 58 48 62 34 903 72 486 241 67 115 66 Cysteine protease CP14 (AHRD V3.3 *** T2BRA8_TOBAC) Solyc02g076720.3 2409 2777 3090 2557 2309 2543 2449 1980 2460 2047 2281 2255 2519 3100 2515 Phosphoribosylformylglycinamidine synthase (AHRD V3.3 *** A0A2G2VBS3_CAPBA) AT1G74260 Solyc02g076730.3 90 243 396 472 350 525 568 193 483 191 764 361 266 331 627 Cysteine protease CP14 (AHRD V3.3 *-* T2BRA8_TOBAC) Solyc02g076740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g076750.3 301 1152 652 1278 1097 794 888 1109 2618 1252 848 2086 678 909 863 Cysteine protease CP14 (AHRD V3.3 *** T2BRA8_TOBAC) Solyc02g076760.3 152 238 298 295 346 299 325 308 300 272 314 261 323 296 343 N-(5'-phosphoribosyl)anthranilate isomerase (AHRD V3.3 *** S8D1B0_9LAMI) AT1G07780 Solyc02g076770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 abscisic acid receptor PYL4-like (AHRD V3.3 *** A0A2I4EQL0_9ROSI) Solyc02g076780.3 391 385 424 455 524 591 682 622 567 394 425 482 421 423 556 MAP kinase kinase kinase 17 Solyc02g076790.4 631 579 661 680 682 824 764 598 510 514 524 582 587 644 735 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1PUY4_ARTAN) AT3G56210 Solyc02g076800.1 324 148 119 207 370 258 224 188 128 273 123 77 191 81 157 Phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein (AHRD V3.3 *** A0A2P5EP15_TREOI) AT1G29195 Solyc02g076810.4 885 579 649 533 494 561 505 527 564 760 602 466 702 562 593 trihelix transcription factor ASIL2-like (AHRD V3.3 *** A0A2I4DK89_9ROSI) Solyc02g076820.4 30 34 17 69 26 32 42 16 20 37 56 9 70 47 97 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A2G3D5D2_CAPCH) Solyc02g076830.1 8 3 1 0 5 3 5 1 2 1 0 0 1 4 10 Cell attachment protein in somatic embryogenesis (AHRD V3.3 *** Q6I6Y6_DAUCA) AT1G78830 Solyc02g076840.3 2437 2075 2147 2017 2827 2875 2853 3444 2678 2727 2236 2896 1576 1960 1818 Protein SCAR1 (AHRD V3.3 *** A0A2G2VBP6_CAPBA) AT4G18600 Solyc02g076850.2 21 16 64 48 41 40 54 32 27 13 61 65 55 33 45 Dof zinc finger protein4 AT1G29160 Solyc02g076860.3 0 1 3 1 0 0 0 3 3 0 0 0 0 0 0 Pollen allergen Ole e 1 family (AHRD V3.3 *** A0A2U1LWI3_ARTAN) Solyc02g076870.4 653 477 486 520 422 463 472 512 507 546 506 482 426 490 422 Hydrolase-like protein family (AHRD V3.3 *** AT1G29120.8) AT1G29120 Solyc02g076880.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6Q6X8_ACTCH) Solyc02g076890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF538 family protein (AHRD V3.3 *** B6T6F5_MAIZE) Solyc02g076900.4 302 302 258 271 218 226 243 234 184 219 343 230 329 321 301 Dual specificity phosphatase (AHRD V3.3 *** A0A200QWG9_9MAGN) AT4G18593 Solyc02g076910.3 3 2 0 1 0 0 0 0 0 0 3 0 0 0 0 Cysteine protease (AHRD V3.3 *** A0A2U1Q178_ARTAN) AT5G45890 Solyc02g076920.3 0 1 0 2 2 3 13 1 0 0 8 3 2 1 0 bHLH transcription factor 013 Solyc02g076930.2 32 51 56 23 72 53 71 52 39 33 43 59 63 32 30 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1Q4E6_ARTAN) AT2G27430 Solyc02g076940.2 3 4 5 11 16 23 13 13 12 5 1 6 12 8 25 Receptor-like cytosolic serine/threonine-protein kinase RBK2 (AHRD V3.3 *-* A0A2G3BYG5_CAPCH) Solyc02g076950.2 184 197 207 176 137 208 212 205 196 226 131 255 147 215 123 Maternal effect embryo arrest 18 (AHRD V3.3 *-* A0A2U1M458_ARTAN) Solyc02g076970.2 6 10 35 26 15 26 15 6 9 7 14 15 6 17 11 Cysteine protease (AHRD V3.3 *** A0A2U1Q178_ARTAN) Solyc02g076980.5.1 109 19 7 32 0 2 5 1 3 8 6 5 96 109 30 Cysteine protease-like protein (AHRD V3.3 *** Q9SG15_ARATH) Solyc02g076990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phospholipase A1-II 1 (AHRD V3.3 *** A0A1U8FS88_CAPAN) Solyc02g077000.3 1 0 0 2 0 0 0 0 0 0 0 0 3 0 6 Phospholipase A1-II 1 (AHRD V3.3 *** A0A1U8FS88_CAPAN) Solyc02g077010.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Phospholipase A1-II 1 (AHRD V3.3 *** A0A2G2VBM1_CAPBA) Solyc02g077020.3 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 Phospholipase A1-II 1 (AHRD V3.3 *** A5YW95_CAPAN) Solyc02g077030.3 54 104 104 120 53 51 32 24 128 116 273 79 110 86 161 Phospholipase A1-II 1 (AHRD V3.3 *** A0A2G2VBM1_CAPBA) Solyc02g077040.4 1352 432 220 88 2 1 1 6 41 242 126 11 1676 1411 439 phytophthora-inhibited protease 1 Solyc02g077050.3 546 498 400 230 198 163 128 197 148 255 499 122 302 182 192 Cysteine protease (AHRD V3.3 *** A0A2U1Q178_ARTAN) Solyc02g077060.2 10 2 6 0 0 0 0 1 1 3 9 0 2 6 8 NB-ARC domains-containing protein (AHRD V3.3 *-* A0A2U1QPI4_ARTAN) AT3G50460 Solyc02g077070.3 2 6 12 1 0 0 0 0 0 0 1 0 1 0 0 Unknown protein Solyc02g077080.3 484 557 769 527 645 688 596 594 905 840 1900 653 781 454 639 Protein trichome birefringence-like 40 (AHRD V3.3 *** A0A2G2VBM9_CAPBA) AT1G29050 Solyc02g077090.4 1010 2485 2047 3076 4419 3558 3854 5234 2812 3509 1956 4488 1514 1929 913 Protein CHUP1, chloroplastic (AHRD V3.3 *-* A0A2G3D559_CAPCH) AT4G18570 Solyc02g077100.3 795 431 577 568 99 72 78 50 247 205 431 129 530 560 854 Phospholipase A1-IIgamma (AHRD V3.3 *** A0A2U1NY06_ARTAN) Solyc02g077110.3 66 84 153 87 90 115 113 80 139 59 218 53 46 71 189 Phospholipase A1-II 1 (AHRD V3.3 *** A0A2G2XE87_CAPBA) AT4G18550 Solyc02g077130.2 13 15 13 8 11 16 10 13 7 16 11 6 13 2 24 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3D516_CAPCH) Solyc02g077140.3 76 111 39 95 44 54 35 56 120 57 30 47 94 39 74 Phospholipase A1-II 1 (AHRD V3.3 *** A0A2G2XEC5_CAPBA) Solyc02g077150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phospholipase A1-II 1 (AHRD V3.3 *** A0A2G3AN96_CAPAN) AT4G18550 Solyc02g077160.3 217 392 522 412 730 772 686 647 446 275 315 389 450 317 530 Phospholipase A1-IIgamma (AHRD V3.3 *** A0A2U1NY06_ARTAN) Solyc02g077170.3 7 27 79 53 171 135 105 145 49 22 40 72 23 38 6 XH/XS domain-containing protein (AHRD V3.3 *-* A0A1P8B8T3_ARATH) Solyc02g077180.1 6 6 1 3 19 26 20 19 9 3 1 19 5 6 3 Unknown protein Solyc02g077190.3 5 9 6 9 26 15 27 20 16 7 6 21 20 22 2 Unknown protein Solyc02g077200.3 1 4 7 1 3 7 6 1 5 8 6 7 2 6 0 Unknown protein Solyc02g077210.1 32 58 86 83 109 117 96 90 98 47 25 58 61 83 33 hypothetical protein (AHRD V3.3 *-* AT4G18490.7) Solyc02g077220.3 323 792 794 942 1619 1402 1346 1695 924 767 741 1272 831 815 436 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3D5Q5_CAPCH) AT5G45920 Solyc02g077230.3 83 39 51 23 19 8 4 6 32 39 23 22 87 67 33 transmembrane protein (AHRD V3.3 *-* AT2G31090.1) Solyc02g077240.4 148 255 296 363 360 280 296 321 363 390 363 250 389 352 204 Pyruvate decarboxylase (AHRD V3.3 *** A0A2K3PNN6_TRIPR) Solyc02g077250.2 105 228 346 483 149 273 198 160 454 264 348 369 293 378 233 TCP transcription factor 1 Solyc02g077260.3 262 228 206 207 103 101 115 103 233 167 132 118 611 253 271 SUN-like protein5 AT2G33990 Solyc02g077270.4 40 28 49 48 7 24 17 6 22 46 118 25 47 41 107 Calcium-binding EF-hand family protein (AHRD V3.3 *-* A0A2U1MZJ3_ARTAN) Solyc02g077280.4 378 339 407 340 451 405 430 358 327 260 314 260 325 431 398 GTPase Era (AHRD V3.3 *** A0A1J3F6D1_NOCCA) AT5G66470 Solyc02g077290.2 17 11 0 9 3 10 7 1 7 7 8 4 6 12 7 glutamate receptor-like 1.2 Solyc02g077300.2 12 23 50 50 67 54 37 47 15 6 1 19 21 48 26 Peroxidase (AHRD V3.3 *** K4B8V7_SOLLC) AT2G34060 Solyc02g077310.4 94 99 108 105 181 136 179 102 112 95 132 134 156 140 130 D-aminoacyl-tRNA deacylase (AHRD V3.3 *-* A0A1J6IGK4_NICAT) AT4G18460 Solyc02g077320.4 743 696 728 641 666 704 742 689 620 618 489 632 776 903 641 Negative regulator of systemic acquired resistance (SNI1) (AHRD V3.3 *** A0A2U1M5U8_ARTAN) AT4G18470 Solyc02g077330.3 454 1136 2187 1797 798 792 746 710 1878 1112 2155 1461 1064 952 987 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3D5Q8_CAPCH) AT5G45950 Solyc02g077340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3BD38_CAPCH) AT5G45960 Solyc02g077350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 Unknown protein Solyc02g077360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene Response Factor B.2 AT4G18450 Solyc02g077370.1 140 48 64 24 12 8 1 0 6 22 76 9 105 144 85 Ethylene Response Factor C.5 Solyc02g077380.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain protein (AHRD V3.3 *-* A0A2K3KYL2_TRIPR) Solyc02g077390.2 60 295 106 67 240 185 162 261 60 111 270 99 94 32 13 compound inflorescence AT2G33880 Solyc02g077400.4 7 28 13 33 18 12 7 18 13 16 25 3 7 9 33 Rac-like GTP binding protein (AHRD V3.3 *** Q9S821_PHYPA) AT5G45970 Solyc02g077410.3 3217 2801 3098 2477 2018 1993 1888 1744 1960 1971 2295 1818 3358 2812 3346 28 kDa heat-and acid-stable phosphoprotein (AHRD V3.3 *** A0A1U8FTR4_CAPAN) AT5G46020 Solyc02g077420.3 1 6 17 9 0 5 1 0 22 9 83 0 22 28 307 Phospholipase A1-II 1 (AHRD V3.3 *** A0A2G3D5J6_CAPCH) Solyc02g077430.4 278 259 94 80 253 269 201 181 190 160 120 134 144 268 397 Phospholipase A1-II 1 (AHRD V3.3 *** A0A2G3D5J3_CAPCH) Solyc02g077440.3 610 233 233 278 242 262 254 227 300 314 419 283 335 277 277 Transcription elongation factor 1 homolog (AHRD V3.3 *** A0A1U8FVQ1_CAPAN) AT5G46030 Solyc02g077450.3 1526 903 1108 903 955 869 776 1088 1169 1687 1101 1261 904 858 1079 Vascular plant one zinc finger transcription factor protein (AHRD V3.3 *** V6BQR5_9BRYO) AT1G28520 Solyc02g077460.3 163 206 308 212 236 290 291 201 249 123 347 209 146 221 270 Octanoyltransferase (AHRD V3.3 *** A0A2G3AER8_CAPAN) AT1G04640 Solyc02g077470.4 220 402 712 453 475 536 493 418 384 440 457 349 557 519 311 OPA3-like protein (AHRD V3.3 *** A0A2I4G3K5_9ROSI) AT1G28510 Solyc02g077480.1 411 4631 3688 3853 6250 5962 5214 6631 2713 2481 2862 5171 1128 3669 1547 Histone H3 (AHRD V3.3 *** B3TM40_ELAGV) AT1G09200 Solyc02g077490.3 3 3 3 0 0 9 6 2 1 2 0 4 3 1 0 3'-5' exonuclease domain (AHRD V3.3 *-* A0A200QBM5_9MAGN) Solyc02g077500.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g077510.4 1 0 14 3 14 8 4 7 0 4 2 2 0 5 2 O-methyltransferase (AHRD V3.3 *** A0A2S1PVB3_CAMAC) Solyc02g077520.3 1 7 0 3 0 0 0 0 1 3 0 0 9 2 0 O-methyltransferase (AHRD V3.3 *** A0A2S1PVB3_CAMAC) Solyc02g077530.2 0 0 0 0 0 1 0 8 0 0 0 0 0 0 0 O-methyltransferase (AHRD V3.3 *** A0A2S1PVB3_CAMAC) Solyc02g077540.4 3 3 0 0 30 21 14 17 14 2 2 5 3 0 0 DUF599 domain-containing protein (AHRD V3.3 *** A0A1Q3C482_CEPFO) AT5G46060 Solyc02g077550.4 0 0 12 10 0 2 0 0 1 0 4 0 0 1 0 DUF599 domain-containing protein (AHRD V3.3 *** A0A1Q3C482_CEPFO) AT5G46060 Solyc02g077560.3 4564 3895 4903 4446 5096 6053 5461 5681 6365 4471 5994 5886 3481 4063 3521 auxin response factor 3 AT2G33860 Solyc02g077570.3 2 6 2 0 6 13 9 7 1 9 0 0 34 3 3 MLO-like protein (AHRD V3.3 *** A0A1C9A1H9_SOLLC) Solyc02g077580.1 0 0 0 0 8 6 1 2 0 0 0 0 2 0 0 Glutaredoxin-C9 (AHRD V3.3 *** A0A2G2XEH8_CAPBA) Solyc02g077590.1 768 209 262 398 10 22 19 5 136 99 193 16 97 196 368 Homeobox-leucine zipper-like protein (AHRD V3.3 *-* Q3HRT1_PICGL) AT5G53980 Solyc02g077600.3 1847 1801 1795 1293 1546 1518 1562 1712 1508 1298 1331 1393 1391 1574 1278 Guanylate-binding protein (AHRD V3.3 *** A0A200QKY2_9MAGN) AT5G46070 Solyc02g077610.3 119 44 185 99 36 17 9 15 32 53 181 29 72 79 87 NAC domain protein (AHRD V3.3 *** S5R952_9ROSA) Solyc02g077620.1 5 18 31 40 18 46 12 28 16 9 7 36 7 17 20 Sulfotransferase (AHRD V3.3 *** A0A1Q3AUR5_CEPFO) AT1G18590 Solyc02g077630.3 707 1265 1549 1464 1970 2173 1988 1687 1895 1300 1797 1847 1564 1484 1268 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6QLC9_ACTCH) AT1G28440 Solyc02g077640.1 7 5 0 16 2 11 10 8 13 4 11 5 1 3 0 DUF679 domain-containing protein (AHRD V3.3 *** A0A1Q3AXA9_CEPFO) AT4G18425 Solyc02g077650.2 88 48 39 39 77 44 53 61 32 40 31 35 93 95 42 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2UXY2_CAPBA) AT5G46100 Solyc02g077660.3 2586 1872 1791 1381 1277 1770 1593 1533 1795 1422 1617 1376 1532 1867 1848 Homeobox domain-containing protein/DDT domain-containing protein (AHRD V3.3 *** A0A1Q3AXQ1_CEPFO) AT1G28420 Solyc02g077670.3 595 363 480 507 266 227 258 276 506 347 402 406 550 440 331 DnaJ-like protein (AHRD V3.3 *** Q9SP09_TOBAC) AT2G20560 Solyc02g077680.4 585 770 879 1002 1055 1042 1216 1242 1017 841 760 865 653 920 932 Alpha-1,4 glucan phosphorylase (AHRD V3.3 *** A0A2G2XET2_CAPBA) Solyc02g077690.4 131 163 184 168 234 192 210 248 291 153 173 159 208 214 155 Myosin heavy chain-like protein (AHRD V3.3 *** F4HY55_ARATH) AT1G28410 Solyc02g077700.1 140 232 155 398 390 266 291 317 198 226 340 215 260 267 259 transmembrane protein (AHRD V3.3 *** AT2G33855.1) AT2G33855 Solyc02g077710.1 3911 9715 6819 7304 5822 4730 3359 6705 9588 8936 8375 9081 9166 7611 8726 protein E6-like (AHRD V3.3 *-* A0A2I4DTB4_9ROSI) AT2G33850 Solyc02g077720.4 83 91 88 111 72 57 45 31 99 48 202 73 133 48 216 Unknown protein Solyc02g077730.3 1214 1892 1584 1266 1482 1437 1561 1523 848 973 1535 1256 2343 1846 1601 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial (AHRD V3.3 *** A0A2G3C0W3_CAPCH) AT1G28395 Solyc02g077740.3 2714 2067 2022 1768 2073 1845 1748 2079 2308 1960 1809 2251 2688 2048 1693 Nucleic acid-binding, OB-fold (AHRD V3.3 *-* A0A2U1QDH2_ARTAN) Solyc02g077750.4 3610 1531 1180 1159 695 856 737 723 1083 1443 975 1068 1007 966 1116 Protein DEHYDRATION-INDUCED 19 (AHRD V3.3 *-* A0A2U1KNK7_ARTAN) Solyc02g077760.2 550 175 239 307 172 195 156 115 128 179 221 204 141 147 277 Unknown protein Solyc02g077770.3 134 44 42 126 86 72 94 56 80 216 52 104 63 61 74 F-box domain-containing protein (AHRD V3.3 *** A0A2U1MSG2_ARTAN) Solyc02g077780.3 660 516 634 424 197 274 239 420 446 500 627 312 792 447 386 MACPF domain-containing protein (AHRD V3.3 *** A0A1Q3CFU3_CEPFO) AT1G28380 Solyc02g077790.1 6 0 0 1 6 8 1 0 0 1 0 4 0 0 0 Unknown protein Solyc02g077800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g077810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor 4 (AHRD V3.3 *** A0A1U8FGJ1_CAPAN) AT5G44210 Solyc02g077820.1 0 3 0 0 0 1 0 0 0 1 0 0 0 0 0 Ethylene-responsive transcription factor 4 (AHRD V3.3 *** A0A1U8FGJ1_CAPAN) AT5G44210 Solyc02g077830.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g077840.2 4217 2235 1548 1382 1840 1211 1122 1653 1056 2557 2118 2504 2005 1529 1764 Ethylene-responsive transcription factor 4 (AHRD V3.3 *-* A0A2G3D5H4_CAPCH) Solyc02g077850.3 885 965 1101 947 971 1008 1031 1102 1183 1305 949 1158 1014 1054 1024 Leucine-rich repeat receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A0A7LUM7_ALBBR) AT1G28340 Solyc02g077860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *-* D6C626_9APIA) Solyc02g077865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) ATMG00240 Solyc02g077870.1 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 Unknown protein Solyc02g077880.3 18388 5211 6194 5286 1095 1214 1437 780 4763 10414 7969 5780 3652 6283 12159 Auxin-repressed protein (AHRD V3.3 *** A9YSI8_TOBAC) AT1G28330 Solyc02g077890.4 557 581 512 410 475 463 447 419 520 527 491 520 569 586 392 RING 1B (AHRD V3.3 *** F4I2H5_ARATH) Solyc02g077900.4 1320 1017 1183 1113 921 1094 1046 929 991 1133 1110 849 1119 1265 1288 glyoxysomal processing protease, glyoxysomal (AHRD V3.3 *** A0A2I4DWT0_9ROSI) AT1G28320 Solyc02g077910.4 126 153 212 175 137 131 158 142 121 92 142 180 202 172 210 Mitochondrial substrate carrier family protein (AHRD V3.3 *** A0A1P8B094_ARATH) Solyc02g077920.4 239 207 232 212 159 289 227 195 110 163 132 182 140 91 83 Colorless non-ripening AT2G33810 Solyc02g077940.1 230 218 162 175 178 236 239 194 158 226 198 191 185 250 135 Unknown protein Solyc02g077950.3 903 925 591 916 1065 1134 993 1063 887 869 572 842 1261 806 464 Dof zinc finger protein5 AT1G28310 Solyc02g077960.3 138 116 72 92 235 202 190 216 113 112 100 135 177 168 115 Dof zinc finger protein PBF (AHRD V3.3 *** A0A2G3A8C7_CAPAN) Solyc02g077970.4 493 105 54 53 54 31 40 41 140 152 110 283 65 304 1083 Late embryogenesis abundant protein (AHRD V3.3 *** A0A200PQ87_9MAGN) AT5G44310 Solyc02g077980.3 242 38 13 44 21 12 5 6 51 58 74 66 27 50 156 Unknown protein Solyc02g077990.3 757 1663 1505 2135 2255 1638 2390 2577 1735 1681 1333 1888 888 1262 1053 30S ribosomal protein S5, chloroplastic (AHRD V3.3 *** A0A1U8FKT3_CAPAN) AT2G33800 Solyc02g078000.2 1193 753 909 893 601 712 879 469 673 717 860 716 689 971 941 transcriptional corepressor LEUNIG-like (AHRD V3.3 *-* A0A2I4H8H0_9ROSI) Solyc02g078010.4 40 27 24 25 13 23 38 23 14 23 10 48 36 21 19 transmembrane protein (AHRD V3.3 *** AT1G28250.1) AT1G28250 Solyc02g078020.3 765 538 491 493 474 428 374 443 698 630 451 416 692 660 673 Telomerase activating protein est1 (AHRD V3.3 *-* A0A1Y1IMS9_KLENI) AT1G28260 Solyc02g078030.3 2537 2865 3720 5765 3198 2883 4060 5118 2691 4441 3945 2661 3271 3585 2116 VQ motif-containing protein 4 (AHRD V3.3 *** A0A2G2XER5_CAPBA) AT1G28280 Solyc02g078040.3 11342 26506 28644 53303 64356 50027 61418 81569 21643 36386 28408 47928 16379 29673 30567 Pistil-specific extensin-like protein (AHRD V3.3 *-* A0A2G3A881_CAPAN) Solyc02g078050.4 0 1 1 12 1 5 10 4 0 1 1 1 3 3 2 Pistil-specific extensin-like protein (AHRD V3.3 *-* A0A2G3A8A5_CAPAN) AT1G28290 Solyc02g078060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pistil extensin like protein (AHRD V3.3 *-* Q40552_TOBAC) Solyc02g078080.1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 LOW QUALITY PROTEIN: pistil-specific extensin-like protein (AHRD V3.3 *-* XP_019067603.1) Solyc02g078090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 forkhead box protein G1-like (AHRD V3.3 *** XP_010316756.1) Solyc02g078100.3 1 2 0 0 2 1 2 4 0 2 7 1 0 2 2 Pistil-specific extensin-like protein (AHRD V3.3 *-* A0A2G3A881_CAPAN) Solyc02g078120.2 3775 7360 4468 4127 5873 4550 4239 6498 4980 5080 3120 5670 7455 6664 3446 Eukaryotic translation initiation factor 3 subunit D (AHRD V3.3 *** A0A1U8FKT0_CAPAN) AT4G20980 Solyc02g078130.3 338 690 981 528 442 324 365 321 834 994 782 628 2416 1135 850 bHLH transcription factor 079 AT4G20970 Solyc02g078140.3 1017 875 724 799 1148 1195 1152 1129 825 978 604 991 947 675 653 MAP kinase kinase kinase 18 AT5G58950 Solyc02g078150.4 379 100 144 43 514 277 658 231 35 262 237 27 6 70 871 PDDEXK-like protein (AHRD V3.3 *** A0A2U1QIN2_ARTAN) AT2G20670 Solyc02g078160.3 177 79 80 29 6 9 9 7 19 65 131 31 5 90 608 DUF506 domain-containing protein (AHRD V3.3 *** A0A1Q3CKJ0_CEPFO) AT2G20670 Solyc02g078170.3 193 132 98 102 42 67 53 71 84 103 124 93 62 83 78 Lectin receptor kinase (AHRD V3.3 *** A0A2K3NP35_TRIPR) AT4G04960 Solyc02g078180.3 423 545 669 508 519 583 593 480 561 438 630 419 412 494 440 DUF616 domain-containing protein (AHRD V3.3 *** A0A1Q3BIE2_CEPFO) AT1G28240 Solyc02g078190.3 0 0 0 4 0 0 0 1 3 0 0 0 0 0 0 V-type proton ATPase subunit G (AHRD V3.3 *** A0A1U8G030_CAPAN) AT4G25950 Solyc02g078200.4 1151 1367 971 1693 1506 919 1198 1113 875 1256 1044 1054 1443 1615 1050 50S ribosomal protein L21, mitochondrial (AHRD V3.3 *** A0A2G3D631_CAPCH) AT4G30930 Solyc02g078210.3 5198 2419 1940 3503 2436 2697 2449 2784 2973 3824 2228 1826 1689 1803 3073 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QBL2_9MAGN) AT2G33770 Solyc02g078220.1 473 456 451 414 334 381 417 385 487 579 365 434 437 405 399 DUF2921 family protein, putative (DUF2921) (AHRD V3.3 *** Q9SVS7_ARATH) AT4G21700 Solyc02g078230.2 1646 1258 1151 1248 1581 1751 1759 1592 1402 1307 943 1556 680 1134 714 Callose synthase 12 (AHRD V3.3 *** A0A2G3D663_CAPCH) AT4G04970 Solyc02g078240.4 298 222 173 181 411 455 370 323 223 269 145 216 174 176 154 Phosphoglycerate mutase (AHRD V3.3 *** A0A1Y1HX49_KLENI) Solyc02g078250.4 0 0 0 2 0 0 0 0 0 0 4 0 1 0 0 CASP-like protein (AHRD V3.3 *** A0A218WXP0_PUNGR) AT4G03540 Solyc02g078260.3 5694 4974 3629 3396 3293 3170 3438 3796 4377 4080 3012 4025 3688 4409 4133 RNA polymerase II subunit 2 AT4G21710 Solyc02g078270.3 324 530 526 411 607 578 637 602 579 410 440 494 596 646 555 LSD1 zinc finger family protein (AHRD V3.3 *-* A0A1Y1ICY2_KLENI) Solyc02g078280.3 3 35 33 9 8 21 28 30 21 13 28 30 6 24 3 DNA ligase-like protein (AHRD V3.3 *** AT2G33793.2) AT2G33793 Solyc02g078285.1 70 32 81 43 41 73 61 52 64 59 51 48 52 72 82 Transcription initiation factor TFIID subunit 13 (AHRD V3.3 *** A0A2G3D630_CAPCH) AT1G02680 Solyc02g078290.4 0 14 23 14 28 14 25 25 18 1 2 16 10 23 11 DNA ligase-like protein (AHRD V3.3 *** AT2G33793.2) Solyc02g078300.3 212 261 315 280 370 398 330 259 212 224 270 215 331 281 368 Transcription initiation factor TFIID subunit 13 (AHRD V3.3 *** A0A2G3D630_CAPCH) AT1G02680 Solyc02g078320.3 817 421 359 442 470 318 455 390 390 771 828 436 419 405 599 E3 ubiquitin-protein ligase RMA1H1-like (AHRD V3.3 *** A0A2I4ELD1_9ROSI) AT4G27470 Solyc02g078330.3 252 258 252 277 303 269 232 242 259 190 269 217 284 318 268 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QWZ8_9MAGN) AT2G20710 Solyc02g078340.4 0 3 0 0 0 0 2 0 1 1 12 1 1 0 11 Heat stress transcription factor B-2b (AHRD V3.3 *** A0A2G3D674_CAPCH) Solyc02g078350.3 103 120 96 85 101 103 92 78 83 67 87 60 114 71 64 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QWY0_9MAGN) AT4G21705 Solyc02g078360.4 499 540 303 325 448 417 312 631 464 486 241 522 607 451 271 Glutaredoxin (AHRD V3.3 *** A0A200PQV3_9MAGN) AT4G04950 Solyc02g078370.1 0 2 3 0 5 0 0 4 1 6 9 0 0 0 0 anther-specific protein TA-29-like (AHRD V3.3 *** XP_004233830.1) Solyc02g078380.3 570 247 281 238 421 391 373 463 272 381 288 357 221 246 456 Stem-specific protein TSJT1 (AHRD V3.3 *** A0A1U8FVZ0_CAPAN) Solyc02g078390.3 656 536 537 362 218 361 334 294 410 493 675 354 606 508 459 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200PQX6_9MAGN) AT1G65070 Solyc02g078400.3 327 639 239 422 359 402 281 520 1154 1199 128 529 1106 264 115 Allantoinase (AHRD V3.3 *** A0A2G3D677_CAPCH) AT4G04955 Solyc02g078410.1 328 357 374 267 491 448 383 393 419 442 438 265 356 227 465 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 (AHRD V3.3 *** A0A1U8FTY5_CAPAN) AT1G48320 Solyc02g078430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein (AHRD V3.3 *-* AT4G21720.3) Solyc02g078440.3 554 548 485 570 504 477 521 464 574 472 536 458 538 583 671 RNA polymerase II transcription factor B subunit 2 (AHRD V3.3 *** A0A2G3A8K6_CAPAN) AT4G17020 Solyc02g078450.3 137 110 188 216 122 164 162 163 118 91 80 71 461 272 150 tetraspanin-19-like (AHRD V3.3 *** A0A2I4GWP3_9ROSI) Solyc02g078460.3 1226 539 381 579 344 360 325 298 511 824 522 417 556 486 799 RING/U-box superfamily protein (AHRD V3.3 *** F4JAD0_ARATH) AT5G58787 Solyc02g078470.4 207 143 170 173 115 131 159 107 123 161 215 153 160 167 191 Tetratricopeptide-like helical (AHRD V3.3 *-* A0A2U1KJF7_ARTAN) Solyc02g078480.3 212 294 522 316 269 250 250 267 390 563 437 334 341 293 199 CBS domain-containing protein (AHRD V3.3 *** A0A1Q3C2E1_CEPFO) AT5G53750 Solyc02g078490.3 191 120 134 149 129 161 182 128 156 145 167 141 73 137 154 splicing factor U2af large subunit A isoform X1 (AHRD V3.3 *** XP_010316737.1) Solyc02g078500.2 69 27 50 38 65 84 81 77 76 57 69 83 19 50 41 Aluminum induced protein with YGL and LRDR motifs (AHRD V3.3 *** Q9FG81_ARATH) Solyc02g078510.4 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 Acylsugar acyltransferase 3 (AHRD V3.3 *-* A0A0B5J4M4_SOLHA) Solyc02g078520.4 5140 2741 1804 2129 1589 1636 1515 1667 2303 2907 1648 2099 2009 2364 1916 Mediator of rna polymerase ii transcription subunit 16 (AHRD V3.3 *** A0A1J6K1R5_NICAT) AT4G04920 Solyc02g078530.3 56 37 120 51 30 21 14 22 62 73 99 44 64 44 38 Protein kinase domain (AHRD V3.3 *** A0A200PQT3_9MAGN) Solyc02g078540.4 3586 9191 6140 6025 10233 7317 7386 9302 8147 5784 6977 7139 9220 7232 6954 Clathrin light chain (AHRD V3.3 *-* A0A2G3D6A8_CAPCH) Solyc02g078550.3 1657 1507 1351 1532 1202 1508 1671 1353 1193 1031 1152 992 1237 1185 1057 RNA polymerase II C-terminal domain phosphatase-like 1 (AHRD V3.3 *** A0A2G3D6D3_CAPCH) AT4G21670 Solyc02g078560.4 2121 1603 1682 2140 1384 1417 1592 1343 1320 1674 1805 1449 1554 1892 1486 WAPL (Wings apart-like protein regulation of heterochromatin) protein (AHRD V3.3 *** A0A2U1QIN8_ARTAN) AT1G11060 Solyc02g078570.3 126 269 397 429 686 490 463 490 417 345 303 439 295 366 169 Epoxide hydrolase (AHRD V3.3 *** A0A2U1MDJ4_ARTAN) Solyc02g078580.1 998 1032 902 789 840 868 807 897 1115 850 829 951 1231 1066 932 RNA polymerase-associated protein RTF1 (AHRD V3.3 *** A0A2K3PFZ0_TRIPR) AT1G61040 Solyc02g078590.1 38 59 67 57 73 88 87 76 79 43 65 84 78 66 50 Alpha 1,4-glycosyltransferase family protein (AHRD V3.3 *** A0A1P8APP1_ARATH) AT1G61050 Solyc02g078600.3 89 76 75 94 82 69 57 58 119 86 126 92 65 94 194 polyol monosaccharide transporter 1 AT2G20780 Solyc02g078610.4 3912 3089 2105 1832 1690 1751 1770 2081 2104 2097 1604 1846 2983 2675 2346 Splicing factor 3B subunit 2 (AHRD V3.3 *** A0A2G2XEY6_CAPBA) AT4G21660 Solyc02g078620.1 32 17 26 26 0 2 1 0 15 9 9 1 8 6 67 Dof zinc finger protein DOF5.3 (AHRD V3.3 *** A0A2G3D6D4_CAPCH) Solyc02g078630.2 234 251 351 322 234 266 274 165 166 158 314 196 250 216 349 DUF1218 domain-containing protein (AHRD V3.3 *** A0A1Q3B9K8_CEPFO) AT1G61065 Solyc02g078640.3 3024 3874 3442 4284 4100 4019 4466 4669 4275 3248 3071 3615 2970 3786 4041 Protein MOR1 (AHRD V3.3 *** A0A2G3D6B7_CAPCH) AT2G35630 Solyc02g078645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g078650.4 320 123 362 223 4 6 11 2 159 152 134 72 479 228 350 Polyphenol oxidase, chloroplastic (AHRD V3.3 *** A0A2G3D678_CAPCH) Solyc02g078660.4 25 14 80 25 4 6 2 4 12 24 66 10 18 14 18 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* A0A1P8AWR9_ARATH) AT1G61080 Solyc02g078670.3 781 1325 2054 1540 1648 1755 1875 1333 2854 1533 3032 1574 1583 1492 2305 COP1-interacting protein 7 (AHRD V3.3 *** CIP7_ARATH) AT1G61100 Solyc02g078680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3MZK9_TRIPR) AT1G61105 Solyc02g078690.2 30 10 76 84 3 18 6 14 1 5 8 6 5 25 107 Carboxypeptidase (AHRD V3.3 *** A0A1U8FL14_CAPAN) AT1G11080 Solyc02g078700.3 16 19 69 53 51 26 33 35 26 26 31 20 47 46 36 LisH and RanBPM domains containing protein (AHRD V3.3 *** F4HTG9_ARATH) Solyc02g078710.1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat plant protein, putative (AHRD V3.3 *** G7INY3_MEDTR) Solyc02g078720.4 435 363 511 673 576 629 650 469 334 426 708 638 378 341 395 multidrug resistance protein (AHRD V3.3 *** AT1G58007.4) AT1G11120 Solyc02g078750.3 632 463 465 326 237 244 281 277 347 455 397 203 358 242 185 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2XEX2_CAPBA) AT4G03230 Solyc02g078740.4 2 4 9 12 3 8 2 0 29 6 3 6 2 17 9 Unknown protein Solyc02g078760.1 868 1437 1131 1226 610 505 444 534 1477 1161 1469 635 821 718 977 hypothetical protein (AHRD V3.3 *** AT1G11125.1) AT1G61170 Solyc02g078770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g078780.3 1450 2264 2344 2184 3191 3164 3367 3829 2289 2041 2326 2672 1582 1942 1900 Protein STRUBBELIG-RECEPTOR FAMILY 3 (AHRD V3.3 *** A0A2G3D5W2_CAPCH) Solyc02g078790.4 1133 947 869 846 742 825 883 746 996 877 800 708 797 924 1151 Lysine-specific demethylase JMJ25 (AHRD V3.3 *** A0A1J3D4G6_NOCCA) AT1G09060 Solyc02g078800.4 1123 1027 1149 1201 1055 1150 1225 1088 1228 1285 1366 1107 1076 1163 1474 Katanin p80 WD40 repeat-containing subunit B1 (AHRD V3.3 *** A0A2G2XVM8_CAPAN) AT1G61210 Solyc02g078810.4 1472 553 513 396 390 406 378 307 417 638 654 492 424 554 869 Bromodomain protein (AHRD V3.3 *** A0A2K3P7T0_TRIPR) AT1G61215 Solyc02g078820.3 473 361 445 378 372 424 404 303 318 286 292 278 470 427 375 Lysine ketoglutarate reductase trans-splicing-like protein (DUF707) (AHRD V3.3 *** A0A1P8AQF5_ARATH) AT1G61240 Solyc02g078830.4 3103 3368 2320 2239 1968 1723 1720 1949 1521 1661 1785 2203 2852 2509 2022 p21-activated protein kinase-interacting protein 1-like (AHRD V3.3 *** A0A2I4GUT3_9ROSI) AT1G65030 Solyc02g078840.4 763 581 302 429 399 333 312 491 469 750 398 463 689 503 312 Secretory carrier-associated membrane protein (AHRD V3.3 *** A0A1U8FU36_CAPAN) Solyc02g078850.1 62 203 173 195 164 174 148 181 235 142 231 238 210 204 149 glycine-rich protein (AHRD V3.3 --* AT4G21620.2) Solyc02g078860.3 163 214 209 268 243 302 262 272 289 186 274 287 278 290 408 PAP-specific phosphatase HAL2-like (AHRD V3.3 *** A0A1U8FL20_CAPAN) AT5G54390 Solyc02g078870.1 64 55 135 85 14 19 15 10 48 46 93 42 31 86 163 BnaA08g25420D protein (AHRD V3.3 *** A0A078G8I6_BRANA) Solyc02g078880.4 1756 1544 1580 1195 1340 1352 1271 1357 1360 1341 1518 1367 1417 1438 1587 RNA helicase DEAD8 AT5G05450 Solyc02g078890.1 185 262 540 174 107 206 205 120 273 295 398 242 199 251 380 BnaA08g25420D protein (AHRD V3.3 *** A0A078G8I6_BRANA) Solyc02g078900.3 760 644 632 541 572 598 467 468 670 738 605 636 831 699 607 Alternative NAD(P)H dehydrogenase mitochondrial-like (AHRD V3.3 *** A0A2K3P845_TRIPR) Solyc02g078910.3 55 54 61 106 69 75 123 48 62 48 87 31 47 77 93 endonuclease AM238701 AT1G11190 Solyc02g078920.4 446 549 637 638 718 762 750 717 723 664 577 691 658 629 545 Endonuclease 3 (AHRD V3.3 *** A0A2G3D5Y1_CAPCH) AT4G21585 Solyc02g078930.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late embryogenesis abundant (LEA) protein-related protein (AHRD V3.3 *** A0A2U1PXC7_ARTAN) AT1G54890 Solyc02g078940.3 3376 2099 2746 2457 1865 1780 1708 1797 2474 2365 2949 2382 2720 2498 3173 Oxidoreductase, zinc-binding dehydrogenase family protein (AHRD V3.3 *** A0A2U1PX72_ARTAN) AT4G21580 Solyc02g078950.4 539 996 1288 1052 2204 2381 2634 2225 1392 859 2027 1293 672 960 976 Beta-galactosidase (AHRD V3.3 *** A0A2G3A8L8_CAPAN) Solyc02g078960.4 634 490 486 400 484 427 434 436 451 663 420 483 441 469 522 Organic solute transporter ostalpha protein (DUF300) (AHRD V3.3 *** F4I7E7_ARATH) AT1G11200 Solyc02g078970.4 2448 2231 1736 1626 1881 1655 1609 1894 1868 1931 1549 1924 1988 2009 1941 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1MY18_ARTAN) AT1G10580 Solyc02g078980.3 238 187 237 291 283 261 327 222 280 231 194 235 227 226 228 TatD related DNase (AHRD V3.3 *** A0A2U1PXB2_ARTAN) AT5G17570 Solyc02g078990.4 443 711 479 600 721 709 713 766 662 575 522 642 720 772 519 thiosulfate sulfurtransferase Solyc02g079000.4 479 861 740 662 760 765 725 825 753 562 567 637 784 943 575 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic (AHRD V3.3 *** A0A2G2ZY87_CAPAN) AT1G79560 Solyc02g079010.4 23 66 169 106 78 81 96 88 73 48 124 23 24 41 166 Cotton fiber expressed protein (AHRD V3.3 *** A0A109XNG5_GOSHI) Solyc02g079020.4 2961 1431 1468 1396 892 1015 1059 917 1109 1515 1454 1274 1441 1514 1847 B3 domain-containing transcription repressor VAL1 (AHRD V3.3 *** A0A2G2XEW6_CAPBA) Solyc02g079030.3 63 104 148 117 71 86 97 126 99 127 159 114 151 117 67 Sphingosine kinase (AHRD V3.3 *** A0A218NG31_TOBAC) AT4G21540 Solyc02g079040.3 1223 826 1432 805 478 397 393 426 879 919 1100 443 816 780 730 Calmodulin binding protein-like (AHRD V3.3 *** A0A200QI92_9MAGN) AT5G57580 Solyc02g079050.3 290 368 335 362 423 399 448 440 280 229 219 376 303 454 363 Anaphase-promoting complex subunit 4 (AHRD V3.3 *** A0A1J6JF33_NICAT) AT4G21530 Solyc02g079060.3 1789 2235 2239 2049 2377 2347 2276 2084 1996 1802 2069 1849 2544 2433 2306 Eukaryotic translation initiation factor 3 subunit J (AHRD V3.3 *** A0A2G3D5W1_CAPCH) AT1G66070 Solyc02g079070.4 0 31 12 25 51 67 39 39 24 13 69 21 14 40 23 IQ motif (AHRD V3.3 *-* A0A200RBW2_9MAGN) Solyc02g079080.2 0 4 0 3 0 0 2 1 0 0 0 0 0 0 1 F-box/RNI-like superfamily protein (AHRD V3.3 *** A0A1I9LTT4_ARATH) Solyc02g079090.4 136 148 77 184 133 163 193 161 136 147 72 175 117 125 91 Bifunctional riboflavin kinase/FMN phosphatase (AHRD V3.3 *-* A0A2G3D5Y9_CAPCH) Solyc02g079100.3 810 555 660 754 879 825 915 640 709 727 737 640 508 631 842 Riboflavin kinase/FMN hydrolase (AHRD V3.3 *** A0A2U1MB96_ARTAN) AT4G21470 Solyc02g079110.3 876 679 666 641 667 628 690 796 499 565 440 734 705 802 581 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1LQD8_ARTAN) AT4G21520 Solyc02g079120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *** A0A1Q3ASY9_CEPFO) AT1G61330 Solyc02g079130.3 418 506 469 433 516 399 451 431 321 408 335 384 724 509 447 SEC-C motif containing protein (AHRD V3.3 *** A0A2U1MX42_ARTAN) AT3G04950 Solyc02g079140.2 40 50 38 21 60 23 59 66 33 40 33 57 94 46 60 heterogeneous nuclear ribonucleoprotein U-like protein 1 (AHRD V3.3 *-* A0A2I4HRG6_9ROSI) Solyc02g079150.2 4 18 5 9 20 23 25 16 5 15 4 9 0 7 9 F-box family protein (AHRD V3.3 *** A0A2U1N101_ARTAN) AT4G21510 Solyc02g079160.2 134 143 166 171 148 160 143 152 78 108 99 113 153 108 121 Unknown protein AT4G21500 Solyc02g079170.3 94 143 106 79 44 25 31 26 84 183 201 52 257 128 148 External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial (AHRD V3.3 *** A0A2G3A937_CAPAN) AT4G21490 Solyc02g079180.1 0 3 0 2 0 4 1 4 7 2 3 0 0 0 0 Heat shock transcription factor (AHRD V3.3 *-* A0A1Y1I763_KLENI) Solyc02g079190.3 3490 2528 2556 3530 2553 2720 2514 2262 2968 3127 3629 2416 2159 1990 3197 Protein AUXIN SIGNALING F-BOX 3 (AHRD V3.3 *** A0A2G3D604_CAPCH) Solyc02g079200.1 141 123 191 258 156 228 246 177 289 217 283 195 192 175 248 ARM repeat superfamily protein (AHRD V3.3 *** O64785_ARATH) AT1G61350 Solyc02g079210.3 3494 3477 1902 2068 1887 1474 1396 1934 1985 1803 1791 2103 3879 3027 2091 Multiple organellar RNA editing factor 5, mitochondrial (AHRD V3.3 *** A0A2G3D600_CAPCH) AT4G20020 Solyc02g079220.4 258 251 593 389 337 618 349 534 310 405 706 394 315 367 248 Sugar transporter protein 1 AT1G11260 Solyc02g079230.3 847 726 678 480 551 561 594 699 681 851 745 540 876 545 380 vesicle-associated protein 4-1-like (AHRD V3.3 *** A0A2I4H6S4_9ROSI) AT4G21450 Solyc02g079240.1 628 20 0 4 0 0 0 0 1 42 0 4 10 19 14 Unknown protein Solyc02g079250.4 489 322 334 330 394 400 360 342 330 315 330 342 270 274 222 Inositol monophosphatase family protein (3',5'-bisphosphate nucleotidase) (AHRD V3.3 *** A0A166NZV4_9PEZI) AT4G05090 Solyc02g079260.2 81 105 104 92 80 88 87 88 94 95 51 91 76 141 81 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XF25_CAPBA) AT4G13650 Solyc02g079270.4 544 356 532 414 449 442 472 421 342 491 540 399 359 443 478 Inositol monophosphatase (AHRD V3.3 *** A0A200QBY1_9MAGN) AT4G05090 Solyc02g079280.3 74 31 28 26 4 4 4 3 44 32 67 9 27 96 355 MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR) AT4G21440 Solyc02g079290.3 55 14 18 6 4 2 2 5 9 28 8 5 7 57 79 FLOWERING LOCUS T/ TERMINAL FLOWER 1-like protein (AHRD V3.3 *** Q6L5N9_POPNI) Solyc02g079300.3 274 458 555 434 649 671 757 631 536 465 481 498 544 552 432 Transcription factor jumonji (JmjC) domain-containing protein (AHRD V3.3 *** Q8VYB9_ARATH) AT4G21430 Solyc02g079310.3 4 0 0 0 0 0 0 0 4 1 1 0 1 0 0 Equilibrative nucleotide transporter like (AHRD V3.3 *** A0A2R6QTM2_ACTCH) Solyc02g079320.3 283 356 472 323 399 586 427 385 241 287 410 410 360 360 273 Unknown protein Solyc02g079330.3 19 42 25 46 24 25 17 23 76 61 103 31 41 29 15 Equilibrative nucleotide transporter like (AHRD V3.3 *** A0A2R6QTM2_ACTCH) Solyc02g079340.3 439 469 528 559 471 672 632 409 300 361 433 422 377 475 391 Unknown protein Solyc02g079350.3 3 4 3 13 9 8 5 7 16 16 12 8 7 17 14 Equilibrative nucleotide transporter like (AHRD V3.3 *** A0A2R6QTM2_ACTCH) Solyc02g079360.3 983 604 635 599 666 509 588 847 592 973 533 848 386 401 345 Phox/Bem1p (AHRD V3.3 *** A0A200Q8I8_9MAGN) AT4G05150 Solyc02g079365.1 0 0 4 0 0 4 1 1 2 1 9 1 4 4 0 Unknown protein Solyc02g079370.3 118 931 441 469 492 420 358 389 896 328 375 844 439 488 303 cyclinD6_3 Solyc02g079380.2 135 114 102 106 86 48 88 134 94 94 35 88 90 94 113 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XF29_CAPBA) AT1G11290 Solyc02g079390.4 174 144 109 181 189 222 219 216 163 272 280 203 85 117 164 Protein PLANT CADMIUM RESISTANCE like (AHRD V3.3 *** A0A2R6QA13_ACTCH) AT1G11380 Solyc02g079400.3 1252 1426 1205 1040 1318 1239 1133 1239 1368 1089 1099 1204 1647 1350 1215 nitric oxide synthase-interacting protein (AHRD V3.3 *** A0A2I4DLR0_9ROSI) AT1G61620 Solyc02g079410.2 947 649 535 473 446 442 386 630 541 678 407 563 874 573 337 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A1P8BH73_ARATH) AT1G11360 Solyc02g079415.1 479 1572 943 747 968 1072 1180 1080 961 492 787 900 1590 1562 1017 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q8VYM6_ARATH) AT4G26600 Solyc02g079430.4 205 233 73 165 122 193 197 131 174 189 104 130 155 75 75 Zinc finger protein CONSTANS-LIKE 13 (AHRD V3.3 *** A0A2G2XF19_CAPBA) AT5G54470 Solyc02g079440.3 0 6 9 2 0 0 0 0 12 2 0 0 3 1 1 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1MQE5_ARTAN) Solyc02g079450.1 0 0 0 0 0 0 0 0 2 1 0 2 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A1P8BBH9_ARATH) Solyc02g079460.1 1 5 0 1 0 0 1 0 0 0 0 1 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1MQE5_ARTAN) Solyc02g079470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1MQE5_ARTAN) Solyc02g079480.1 1 0 0 0 0 7 3 2 6 2 0 9 2 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1MQE5_ARTAN) Solyc02g079490.3 1 18 5 2 6 2 1 0 14 4 2 5 2 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** Q9MAP9_ARATH) AT1G32910 Solyc02g079500.4 2503 3477 2132 2146 1216 1061 954 1004 3482 2241 2638 3566 2689 2527 2118 Peroxidase (AHRD V3.3 *** M1C184_SOLTU) Solyc02g079510.3 704 576 579 785 541 433 499 546 596 485 515 1109 265 467 486 Peroxidase (AHRD V3.3 *** M1C184_SOLTU) Solyc02g079520.3 57 46 73 74 23 30 25 14 32 38 47 33 96 58 27 Calcium-binding protein PBP1 (AHRD V3.3 *** A0A1U8G283_CAPAN) Solyc02g079530.4 10 4 1 6 0 0 1 8 6 3 10 1 0 7 9 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2VAF6_CAPBA) AT1G11330 Solyc02g079540.2 13 8 0 42 0 0 0 0 2 1 6 4 8 22 76 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2VAF2_CAPBA) AT1G11330 Solyc02g079550.3 31 44 19 12 0 0 0 3 3 19 0 3 18 31 58 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3D6E9_CAPCH) AT1G11330 Solyc02g079560.1 25 11 8 8 0 0 0 0 3 10 2 6 14 6 43 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3A8Y5_CAPAN) Solyc02g079570.4 151 96 160 87 112 115 115 114 201 115 173 102 98 164 95 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3A8W8_CAPAN) AT4G21390 Solyc02g079580.4 164 92 84 105 65 115 90 97 40 66 113 36 52 64 161 S-receptor kinase-like protein 1 (AHRD V3.3 *** Q5NJB1_SENSQ) Solyc02g079590.3 1791 1272 1871 1087 519 446 513 491 921 1755 1712 681 1466 1373 1341 Receptor protein kinase (AHRD V3.3 *** Q40096_IPOTF) AT4G21380 Solyc02g079600.3 409 180 306 190 35 43 41 30 142 233 479 96 370 183 201 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3N612_TRIPR) Solyc02g079620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G2XZF1_CAPAN) Solyc02g079630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine-rich receptor-like protein kinase (AHRD V3.3 *** A0A2K3LV55_TRIPR) Solyc02g079640.3 781 402 330 415 167 161 128 138 341 324 381 344 400 361 464 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3A8X5_CAPAN) Solyc02g079660.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Receptor-like kinase (AHRD V3.3 *-* P93068_BRAOL) Solyc02g079670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like kinase (AHRD V3.3 *-* B6SWL2_MAIZE) Solyc02g079680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase (AHRD V3.3 *-* B6SVD4_MAIZE) Solyc02g079690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-locus lectin protein kinase family protein (AHRD V3.3 *** F4I8U6_ARATH) Solyc02g079700.1 8 3 1 17 0 0 0 0 0 1 19 0 2 18 68 S-receptor kinase-like protein (AHRD V3.3 *-* Q39393_BRAOL) Solyc02g079710.4 16 14 2 9 1 0 0 0 1 3 16 0 12 20 16 S receptor kinase (AHRD V3.3 *** A4UWL9_BRANA) Solyc02g079715.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) ATMG00240 Solyc02g079720.1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 Calcium-binding protein PBP1 (AHRD V3.3 *** A0A2G3D6J3_CAPCH) Solyc02g079730.4 202 189 189 227 141 117 134 118 160 109 178 154 259 214 228 Thioredoxin-like fold protein (AHRD V3.3 *** A0A2U1LR17_ARTAN) AT4G28590 Solyc02g079740.1 896 884 458 625 580 531 471 629 449 1079 535 763 821 560 567 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3D6H8_CAPCH) AT4G21350 Solyc02g079750.4 295 608 630 558 635 568 521 489 781 519 749 576 643 535 693 Quinone reductase (AHRD V3.3 *** F8WQS4_NICBE) Solyc02g079760.3 350 460 591 1206 554 439 555 506 716 628 553 498 532 483 718 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1PMP2_ARTAN) AT1G61660 Solyc02g079770.3 617 1066 1102 1207 665 636 758 744 1065 804 669 1010 988 1154 794 Multiple organellar RNA editing factor 9, chloroplastic (AHRD V3.3 *** MORF9_ARATH) AT1G11430 Solyc02g079780.1 142 79 66 87 54 34 47 27 99 159 362 40 80 57 328 hypothetical protein (AHRD V3.3 *** AT1G11440.1) AT1G11440 Solyc02g079790.3 6 31 41 67 77 99 97 53 32 18 115 32 44 40 55 DUF538 domain-containing protein (AHRD V3.3 *** A0A1Q3D5N1_CEPFO) AT1G61667 Solyc02g079800.1 4 2 4 0 0 0 4 0 6 2 18 1 0 2 0 transmembrane protein (AHRD V3.3 --* AT3G09280.1) Solyc02g079810.3 0 0 0 1 6 0 0 1 0 0 2 0 0 0 0 bHLH transcription factor 080 AT4G21330 Solyc02g079820.4 74 82 45 46 40 73 48 33 35 42 60 34 56 87 90 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1J3IUT7_NOCCA) Solyc02g079830.1 253 471 443 409 623 474 399 651 446 398 328 486 619 463 284 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1J3CHX3_NOCCA) Solyc02g079840.2 9 0 0 0 2 0 3 3 1 1 0 0 3 1 0 Terpene synthase (AHRD V3.3 *** G5CV40_SOLLC) AT3G25830 Solyc02g079850.4 589 750 784 761 600 754 758 688 796 552 907 723 802 758 967 Unknown protein Solyc02g079860.1 14 4 22 8 11 23 15 5 2 16 23 12 9 4 19 BTB domain-containing protein/NPH3 domain-containing protein (AHRD V3.3 *** A0A1Q3D7J0_CEPFO) Solyc02g079870.4 116 152 296 178 139 150 101 98 190 116 101 110 314 248 260 Unknown protein Solyc02g079880.3 2064 1815 1734 1670 1618 1588 1537 1837 2070 2041 1896 1528 1568 1796 1966 Eukaryotic translation initiation factor-related protein (AHRD V3.3 *** A0A2U1P0K8_ARTAN) AT1G11480 Solyc02g079890.2 2 32 6 10 13 18 10 14 13 13 5 1 2 5 0 Terpene synthase (AHRD V3.3 *** G5CV49_SOLLC) Solyc02g079900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *-* G5CV49_SOLLC) Solyc02g079910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *-* G5CV48_SOLLC) Solyc02g079920.3 58 101 94 61 136 108 90 100 100 65 121 92 64 80 75 Zinc finger, C2H2 (AHRD V3.3 *** A0A2U1PE02_ARTAN) Solyc02g079930.3 198 55 183 114 65 42 47 34 77 74 148 123 62 132 366 phosphosulfolactate synthase AT4G21320 Solyc02g079940.3 11 38 39 29 27 28 38 17 19 30 63 16 7 13 26 Transmembrane protein, putative (DUF1218) (AHRD V3.3 *** A0A1P8B4W6_ARATH) AT4G21310 Solyc02g079950.3 1267 2413 2465 1948 3873 2911 3025 3281 3231 2805 2540 3091 1606 1517 2652 photosystem II oxygen-evolving complex protein 3 AT4G05180 Solyc02g079960.3 611 232 183 192 176 201 172 159 112 236 244 154 162 176 289 Thioredoxin (AHRD V3.3 *** A0A2G3D6G6_CAPCH) AT1G11530 Solyc02g079970.4 4525 4435 4734 5768 5215 4553 4917 4238 3734 5804 5321 4537 4897 4149 4439 bHLH transcription factor 014 Solyc02g079980.3 23 29 50 26 2 3 1 9 10 21 22 12 39 38 83 Sulfite exporter TauE/SafE family protein 2 (AHRD V3.3 *** TAUE2_ARATH) AT1G61740 Solyc02g079990.3 320 374 347 360 196 217 250 180 456 416 566 262 458 268 182 Cysteine-rich receptor-like protein kinase 10 (AHRD V3.3 *** A0A2G3D6H0_CAPCH) AT4G38830 Solyc02g080000.1 0 0 0 0 0 1 0 0 0 0 9 0 0 0 0 Cysteine-rich receptor-like protein kinase 10 (AHRD V3.3 *-* A0A2G2XFS8_CAPBA) Solyc02g080010.2 1092 519 448 637 264 293 316 269 324 577 480 291 503 388 292 Cysteine-rich receptor-like protein kinase 10 (AHRD V3.3 *** A0A2G2XFS8_CAPBA) AT4G23180 Solyc02g080020.1 3 0 1 6 0 0 1 0 2 0 1 0 0 0 0 Cysteine-rich receptor-like protein kinase 29 (AHRD V3.3 *-* A0A2G2XFA8_CAPBA) Solyc02g080030.2 1 0 0 1 0 0 0 1 2 0 0 0 5 1 0 Cysteine-rich receptor-like protein kinase (AHRD V3.3 *** A0A2K3PK62_TRIPR) Solyc02g080040.4 1521 655 534 312 49 52 43 26 155 342 742 81 778 689 523 Cysteine-rich receptor-like protein kinase 29 (AHRD V3.3 *** A0A2G2XFA8_CAPBA) AT4G38830 Solyc02g080050.1 1168 587 348 193 24 12 14 14 134 388 238 37 497 452 256 Cysteine-rich receptor-like protein kinase (AHRD V3.3 *** A0A2K3NTV2_TRIPR) Solyc02g080060.1 12 22 3 4 1 0 4 2 2 5 0 1 13 10 0 Cysteine-rich receptor-like protein kinase 29 (AHRD V3.3 *** A0A2G2XFA8_CAPBA) Solyc02g080070.3 1167 613 549 543 151 111 102 102 376 654 501 339 719 695 562 Cysteine-rich receptor-like protein kinase 29 (AHRD V3.3 *** A0A2G2XFA8_CAPBA) AT4G23180 Solyc02g080080.3 78 86 38 38 0 1 0 1 14 12 29 0 108 201 135 Cysteine-rich receptor-like protein kinase 29 (AHRD V3.3 *** A0A2G2XFA8_CAPBA) AT4G23180 Solyc02g080090.1 0 0 0 0 0 2 2 0 2 0 0 3 1 0 11 Cysteine-rich receptor-like protein kinase 29 (AHRD V3.3 *** A0A2G2XFA8_CAPBA) Solyc02g080100.1 18 19 66 48 27 42 40 9 31 14 52 12 15 4 54 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9SYB2_ARATH) AT4G05220 Solyc02g080110.3 102 98 171 191 37 57 54 54 143 103 38 65 202 197 108 transmembrane protein (AHRD V3.3 *** AT4G21215.2) AT4G21215 Solyc02g080120.3 134 45 21 58 109 85 84 42 30 308 52 53 13 1 36 Gibberellin 2-beta-dioxygenase 8 (AHRD V3.3 *** A0A1U8FMY1_CAPAN) Solyc02g080130.4 1149 994 1010 810 693 757 662 565 711 888 1027 605 1175 1114 1245 Chaperone protein dnaJ 50 (AHRD V3.3 *** A0A2G3A964_CAPAN) AT1G61770 Solyc02g080140.4 812 619 983 793 1035 1124 977 800 727 736 1062 738 788 869 1122 Cysteine-rich PDZ-binding protein (AHRD V3.3 *** A0A1U8FLI2_CAPAN) AT1G61780 Solyc02g080145.1 7 7 0 7 0 0 6 0 1 0 0 2 0 3 24 Unknown protein Solyc02g080150.3 152 228 201 203 178 205 206 201 201 154 148 172 307 252 226 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3CXR1_CEPFO) Solyc02g080160.4 89 436 722 386 508 627 479 482 430 391 355 502 547 466 273 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G2VBB5_CAPBA) Solyc02g080170.1 75 159 53 186 124 145 131 179 121 143 57 162 124 140 54 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1MQR4_ARTAN) AT4G21170 Solyc02g080180.1 10 29 41 69 17 18 28 25 20 42 9 35 42 30 22 Oligosaccharyltransferase complex/magnesium transporter family protein (AHRD V3.3 *** AT1G61790.2) Solyc02g080190.3 13 59 85 79 65 83 62 65 44 48 110 33 44 76 57 Nuclear transport factor 2 (AHRD V3.3 *** A0A2G3A947_CAPAN) AT1G11570 Solyc02g080200.4 67 180 107 307 82 76 48 64 123 89 99 174 145 130 96 Pectinesterase (AHRD V3.3 *** A0A2G2VBJ7_CAPBA) AT1G11580 Solyc02g080220.3 195 147 294 263 35 48 40 14 183 214 562 254 164 205 159 Pectinesterase (AHRD V3.3 *** A0A2G2VBJ7_CAPBA) AT1G11580 Solyc02g080230.3 30 115 113 156 135 190 181 138 145 63 168 133 91 141 79 CRIB domain-containing protein RIC10 (AHRD V3.3 *** A0A1U8FUJ1_CAPAN) AT4G04900 Solyc02g080240.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 COBRA (AHRD V3.3 *** A0A200QL26_9MAGN) Solyc02g080260.4 606 892 590 518 606 647 500 717 710 752 398 769 782 855 281 Woolly Solyc02g080270.3 659 555 695 627 758 757 741 699 598 630 475 612 742 567 640 Vacuolar protein sorting-associated protein 28 homolog (AHRD V3.3 *** A0A1U8FLJ7_CAPAN) AT4G05000 Solyc02g080275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *-* J7H3Z6_CAPAN) Solyc02g080290.3 111 145 148 80 145 189 198 134 132 145 170 104 276 145 134 Beta-glucosidase 46 (AHRD V3.3 *** A0A1U8FUJ5_CAPAN) AT4G21760 Solyc02g080300.3 81 85 79 119 61 49 80 60 111 72 142 94 225 188 209 Beta-glucosidase 46 (AHRD V3.3 *** A0A1U8FUJ5_CAPAN) AT4G21760 Solyc02g080310.2 1141 1398 2381 2153 3806 3809 4098 2549 2925 2039 4202 4249 1512 1763 2289 Beta-glucosidase 46 (AHRD V3.3 *** A0A1U8FUJ5_CAPAN) AT4G21760 Solyc02g080320.4 453 529 343 425 321 429 383 413 243 193 182 362 553 747 525 RNA pseudouridine synthase 6, chloroplastic (AHRD V3.3 *** A0A2G2VBE2_CAPBA) AT4G21770 Solyc02g080330.4 2059 3147 2857 2848 3866 4252 3093 3945 3286 2759 2151 3764 2756 2763 1261 Cytochrome P450 (AHRD V3.3 *** A0A200QM51_9MAGN) AT1G11600 Solyc02g080340.3 480 609 467 702 639 761 736 651 668 515 533 498 653 600 560 Patatin (AHRD V3.3 *** A0A2I4H6Z2_9ROSI) AT1G61850 Solyc02g080350.1 42 52 49 24 26 27 18 39 28 26 24 43 83 89 40 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8FUJ9_CAPAN) AT1G77170 Solyc02g080360.1 2 0 7 9 4 3 0 4 2 0 2 6 0 1 3 transcription factor SOX-4 (AHRD V3.3 --* XP_004982548.1) AT4G21780 Solyc02g080370.3 2978 1737 2457 2163 1864 2095 1924 1721 1499 2307 2062 1984 1697 1797 2076 obamovirus multiplication 1 AT4G21790 Solyc02g080380.4 2204 1549 1392 1326 1610 1620 1328 1656 1529 1724 1473 1903 1793 1691 1540 Derlin (AHRD V3.3 *-* A0A2U1QFF8_ARTAN) Solyc02g080390.2 144 471 451 566 865 954 1038 1214 520 463 467 654 136 449 236 Binding / calmodulin binding protein (AHRD V3.3 *** A0A1P8B7Z7_ARATH) AT4G21820 Solyc02g080400.3 61 186 346 312 411 438 432 338 168 147 376 367 90 184 182 binding / calmodulin binding protein (AHRD V3.3 *-* AT4G21820.3) Solyc02g080410.3 58 65 78 58 63 58 79 41 76 90 151 50 71 49 71 18.8 kDa class V heat shock protein (AHRD V3.3 *** A0A2G2VBF1_CAPBA) AT4G21870 Solyc02g080420.4 3919 4394 3725 4165 3943 3560 3765 3462 3560 2988 3590 4140 4819 4577 3593 RNA-binding protein (AHRD V3.3 *** A0A2K3PBB6_TRIPR) AT1G11650 Solyc02g080430.3 948 908 1050 902 1177 967 1060 947 669 744 864 824 1020 968 871 Mediator of RNA polymerase II transcription subunit 21 (AHRD V3.3 *** A0A2G3CWI4_CAPCH) AT4G04780 Solyc02g080440.3 1064 585 258 404 492 396 381 513 590 816 369 536 509 425 470 Fe-S cluster assembly protein SufB (AHRD V3.3 *** A0A1P8DZ57_9SPHI) AT4G04770 Solyc02g080450.1 3 18 46 29 11 17 7 6 21 10 30 13 39 17 57 hypothetical protein (AHRD V3.3 *-* AT4G04745.1) AT1G11655 Solyc02g080460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kinesin-like protein (AHRD V3.3 *-* A0A2K3P4G4_TRIPR) Solyc02g080470.3 402 765 778 657 875 873 900 844 879 514 726 630 986 957 862 Heat shock protein 70 family (AHRD V3.3 *** A0A200QM07_9MAGN) AT1G11660 Solyc02g080480.3 80 334 89 268 65 94 94 72 308 143 135 124 293 251 360 Protein DETOXIFICATION (AHRD V3.3 *** A3KDM5_TOBAC) Solyc02g080490.3 240 701 699 708 1148 1220 1192 1126 788 614 894 746 504 515 528 Protein DETOXIFICATION (AHRD V3.3 *** A0A328DGG9_9ASTE) Solyc02g080500.3 1700 1584 968 1239 1828 1568 1557 1882 1170 1354 989 1286 1182 946 1010 hypothetical protein (AHRD V3.3 *** AT1G61900.1) AT1G61900 Solyc02g080510.1 1972 2003 1464 1913 4046 4049 3550 3120 2357 1456 2223 1421 2257 1285 2357 Senescence regulator S40 (AHRD V3.3 *** A0A200Q815_9MAGN) AT1G11700 Solyc02g080520.4 294 339 204 389 467 528 449 454 385 255 241 234 364 324 499 Actin cytoskeleton-regulatory complex pan-like protein (AHRD V3.3 *** Q9LPT5_ARATH) Solyc02g080530.3 18940 16351 28252 31478 34584 30829 29895 29330 25632 25351 27519 27001 21918 18783 40871 Peroxidase (AHRD V3.3 *** K4B9S4_SOLLC) AT4G21960 Solyc02g080540.1 503 1370 1094 1343 2309 1948 2332 2160 1651 1429 1569 1381 744 925 1261 ATP synthase gamma chain, chloroplastic (AHRD V3.3 *** A0A2G3D743_CAPCH) AT4G04640 Solyc02g080550.1 43 255 236 244 336 316 355 388 299 214 212 283 127 242 136 Unknown protein AT5G54970 Solyc02g080560.1 53 240 186 155 273 196 251 181 169 131 83 148 188 193 45 Unknown protein AT5G54970 Solyc02g080570.3 814 1163 898 1163 1373 1208 1208 1483 1613 1032 887 1248 1105 1128 969 Soluble starch synthase (AHRD V3.3 *** C7F7H9_SOLTU) AT1G11720 Solyc02g080580.1 226 86 67 55 17 38 25 32 25 78 62 69 49 59 109 senescence regulator (Protein of unknown function%2C DUF584) (AHRD V3.3 *** AT4G04630.1) Solyc02g080590.3 386 287 408 461 383 412 423 381 365 408 393 420 449 393 460 Autophagy-related protein (AHRD V3.3 *** A0A1U8FUM7_CAPAN) AT1G62040 Solyc02g080600.1 412 174 267 383 66 64 63 59 123 93 213 41 220 142 391 Unknown protein Solyc02g080610.4 318 708 877 677 858 872 835 883 1044 657 723 934 662 834 444 Ankyrin repeat (AHRD V3.3 *** A0A200PYZ7_9MAGN) AT1G62050 Solyc02g080620.3 245 597 641 716 1093 1095 1112 780 600 637 843 736 569 594 387 Arogenate dehydratase (AHRD V3.3 *** A0A1U8FWM0_CAPAN) AT1G11790 Solyc02g080630.4 3080 4146 4879 3998 6386 5352 5198 5981 7977 4795 5372 6429 4397 4718 5057 Lactoylglutathione lyase (AHRD V3.3 *** A0A1U8FLK7_CAPAN) AT1G11840 Solyc02g080640.4 1268 1405 2017 1961 1137 1513 1189 1059 1614 1311 1624 1094 2757 992 1183 adenylyl-sulfate reductase AT4G04610 Solyc02g080650.3 324 301 206 179 189 261 208 244 232 264 170 238 198 211 173 ataxin-10-like (AHRD V3.3 *** A0A2I4FM85_9ROSI) AT4G00231 Solyc02g080660.3 396 2792 1563 1453 3720 3706 4049 3405 1666 609 1201 1474 1028 1292 665 Glucan endo-1,3-beta-glucosidase 1 (AHRD V3.3 *** A0A1U8FWM4_CAPAN) Solyc02g080670.3 170 2932 1465 1538 3809 3294 3531 4202 2577 1375 1415 2190 1383 1666 1048 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A1U8FN33_CAPAN) AT4G22010 Solyc02g080680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G42660.1) Solyc02g080690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 glycine-rich protein 5 (AHRD V3.3 *-* XP_010317312.1) Solyc02g080700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 L-ascorbate oxidase-like protein (AHRD V3.3 *-* A0A1U8FN33_CAPAN) Solyc02g080710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeodomain-like protein (AHRD V3.3 *-* A0A2U1MEU4_ARTAN) Solyc02g080730.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeodomain-like protein (AHRD V3.3 *-* A0A2U1M305_ARTAN) Solyc02g080740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeodomain-like superfamily protein (AHRD V3.3 *-* Q9SIZ5_ARATH) Solyc02g080750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g150131.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeodomain-like superfamily protein (AHRD V3.3 *-* Q9SIZ5_ARATH) Solyc02g080760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 glycine-rich protein 5 (AHRD V3.3 *-* XP_010317312.1) Solyc02g080770.2 0 0 0 6 1 1 0 0 0 1 2 0 0 2 0 Unknown protein Solyc02g080780.3 493 367 326 307 228 260 328 218 235 376 353 271 338 220 172 orotidine 5'-phosphate decarboxylase (AHRD V3.3 *** AT1G62250.3) AT1G62250 Solyc02g080790.4 0 1 1 0 0 0 0 3 0 0 3 2 0 0 0 Deoxyhypusine synthase AT5G05920 Solyc02g080800.4 780 821 859 683 651 742 788 567 537 541 774 601 1075 868 746 deoxyhypusine synthase AT5G05920 Solyc02g080810.3 668 1858 1775 1663 2616 2524 2541 2622 2478 1605 1441 1705 1295 1548 2144 Aminomethyltransferase (AHRD V3.3 *** A0A2G2VBG4_CAPBA) AT1G11860 Solyc02g080820.3 397 545 844 590 863 877 833 910 614 622 786 678 629 602 577 Peroxisomal membrane protein PMP22 (AHRD V3.3 *** A0A1U8FN47_CAPAN) Solyc02g080830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box plant-like protein, putative (AHRD V3.3 *** A0A072V4I2_MEDTR) AT4G22030 Solyc02g080840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box plant-like protein, putative (AHRD V3.3 *** A0A072V4I2_MEDTR) AT4G22030 Solyc02g080850.1 1 0 0 0 0 0 0 0 0 0 5 1 0 0 0 F-box plant-like protein, putative (AHRD V3.3 *** A0A072V4I2_MEDTR) AT4G22030 Solyc02g080860.3 5 20 12 13 80 77 87 86 12 11 25 39 18 14 6 protein PHOSPHATE STARVATION RESPONSE 1-like (AHRD V3.3 *-* A0A2I4HP29_9ROSI) Solyc02g080870.3 1 0 0 0 0 1 0 0 0 0 0 0 2 3 11 B-cell receptor-associated protein 31-like protein (AHRD V3.3 *** A0A2U1PTE6_ARTAN) Solyc02g080880.4 5325 1899 2361 1439 1681 1477 1286 1909 1865 2878 2031 2243 1157 1847 1877 Aspartic proteinase (AHRD V3.3 *** A0A1U8FF23_CAPAN) AT1G11910 Solyc02g080890.3 1841 638 1659 541 42 38 39 43 342 837 3674 414 729 900 905 WRKY transcription factor 6 AT1G62300 Solyc02g080900.3 113 404 449 463 560 525 593 555 306 326 435 325 383 342 271 Wall-associated receptor kinase-like protein (AHRD V3.3 *** A0A2K3NTT9_TRIPR) AT1G11915 Solyc02g080910.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectate lyase (AHRD V3.3 *** A0A2G3A9B6_CAPAN) Solyc02g080920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stigma-specific protein Stig1 (AHRD V3.3 *** A0A200RCL2_9MAGN) AT1G11925 Solyc02g080930.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stigma-specific Stig1 family protein (AHRD V3.3 *** A0A2U1PTF1_ARTAN) AT1G11925 Solyc02g080940.3 644 724 769 739 901 779 744 694 746 587 714 661 803 780 1090 Pyridoxal phosphate homeostasis protein (AHRD V3.3 *** A0A1U8FN56_CAPAN) AT1G11930 Solyc02g080950.3 209 232 172 386 221 164 245 325 199 293 121 232 236 357 221 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XFX2_CAPBA) AT4G04370 Solyc02g080955.1 22 20 16 53 34 49 41 50 26 24 50 34 33 30 37 Unknown protein Solyc02g080960.3 33 52 66 37 25 49 60 12 36 21 81 27 47 46 55 Transmembrane protein, putative (DUF1068) (AHRD V3.3 *** F4ITS6_ARATH) Solyc02g080970.4 601 450 570 551 521 396 454 367 423 467 449 507 446 501 732 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *-* A0A2K3MVY8_TRIPR) AT1G62305 Solyc02g080990.2 296 383 467 398 449 470 431 451 490 299 389 409 349 486 591 Leucine--tRNA ligase (AHRD V3.3 *** A0A2G3D719_CAPCH) AT4G04350 Solyc02g150132.1 95 38 80 39 39 42 26 36 54 76 40 44 76 66 43 Unknown protein Solyc02g081010.3 404 374 511 314 228 321 258 329 458 354 409 291 421 419 330 Lysine-specific demethylase JMJ25 (AHRD V3.3 *** A0A2G3A990_CAPAN) AT1G11950 Solyc02g081015.1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc02g081020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g081030.4 1568 1602 2766 1884 1679 1758 1727 2067 2241 3253 4992 2021 1578 1661 3319 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *-* A0A2U1NFB6_ARTAN) Solyc02g081040.4 101 132 145 167 66 84 91 66 196 145 144 149 267 166 207 Lyk11 (AHRD V3.3 *** G3KGB2_SOLLC) Solyc02g081050.4 22 30 3 23 9 21 11 10 15 10 7 20 8 17 2 Lyk12 (AHRD V3.3 *** G3KGB3_SOLLC) AT3G21630 Solyc02g081060.4 17 1 10 19 0 1 3 6 16 2 16 10 0 9 34 Chaperonin-like RbcX (AHRD V3.3 *** A0A200QGZ5_9MAGN) AT4G04330 Solyc02g081070.4 2567 3980 6637 5758 7492 7291 7774 7886 7583 7168 7828 7699 4861 4927 6153 Kinase (AHRD V3.3 *** D7ME76_ARALL) AT4G22130 Solyc02g081080.3 632 405 438 346 462 451 431 387 323 418 421 335 326 443 429 O-fucosyltransferase (AHRD V3.3 *** A0A2P5F0G9_TREOI) AT1G62330 Solyc02g081083.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g081085.1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1KQG6_ARTAN) AT1G40087 Solyc02g081087.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g081120.4 1919 1426 1857 1558 1548 1439 1146 1548 1443 1338 1489 1523 1674 1721 1567 class 1 knotted-like homeodomain protein AT1G62360 Solyc02g081130.3 14 8 48 25 91 102 105 88 24 47 46 15 11 8 33 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (AHRD V3.3 *** A0A2U1QHU8_ARTAN) Solyc02g081140.3 2541 2339 2343 1933 1970 1510 1645 1698 2115 2460 2461 1608 3716 2383 2104 plant UBX domain-containing protein 4 (AHRD V3.3 *** A0A2G3A9D5_CAPAN) AT4G04210 Solyc02g081150.1 1500 1408 1752 1464 1692 1652 1521 1603 1597 1507 2111 1534 1434 1141 1698 serine/arginine repetitive matrix-like protein (AHRD V3.3 *** AT4G22190.1) AT4G22190 Solyc02g081160.3 2127 3846 3253 2856 3601 3335 3157 4198 4076 2892 2393 3921 3836 4186 3831 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (AHRD V3.3 *** A0A1U8FN75_CAPAN) AT4G04040 Solyc02g081170.4 1936 1040 697 926 365 251 243 386 650 1135 551 569 1498 1460 1259 plastid lipid associated protein CHRC AT4G04020 Solyc02g081180.2 23 20 15 19 2 5 2 3 8 5 1 15 43 36 0 RING/U-box superfamily protein (AHRD V3.3 *** Q5XV87_ARATH) Solyc02g081190.4 6804 4262 3869 3594 1250 1157 1024 1380 3493 4232 3906 844 5736 3935 3818 1-aminocyclopropane-1-carboxylate oxidase 4 AT1G05010 Solyc02g081200.1 507 1241 742 755 967 1007 946 1085 1009 563 633 671 949 1090 636 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** A0A1R7T3E1_ARATH) AT1G62390 Solyc02g081210.3 119 573 561 469 693 571 628 773 574 399 573 552 458 485 305 Expansin (AHRD V3.3 *** K4B9Z1_SOLLC) AT3G03220 Solyc02g081220.3 10 3 0 3 1 3 1 0 3 9 0 0 0 0 1 Reticuline oxidase-like protein (AHRD V3.3 *-* A0A1U8FLR4_CAPAN) Solyc02g081230.4 71 94 90 118 72 93 97 93 83 85 33 81 49 77 67 PC-Esterase (AHRD V3.3 *** A0A200PTL6_9MAGN) Solyc02g081240.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QUY3_9MAGN) Solyc02g081250.3 640 665 510 592 542 596 554 527 561 569 485 481 523 618 524 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3A9F6_CAPAN) AT1G65920 Solyc02g081270.4 121 626 751 644 1830 1839 1641 1923 786 470 868 1118 521 705 380 NAC domain-containing protein 53 (AHRD V3.3 *** A0A2G2XFS7_CAPBA) AT1G65910 Solyc02g081290.4 3920 3043 2813 2139 2202 2271 2148 2356 2752 2616 2293 2620 2918 2851 2559 RNA helicase DEAD9 AT2G33730 Solyc02g081300.3 148 196 476 307 312 315 213 110 314 245 560 158 94 210 478 Sucrose synthase (AHRD V3.3 *** K4BA00_SOLLC) AT1G73370 Solyc02g081310.3 721 1088 992 983 1050 1017 1150 1023 889 715 939 874 1259 1156 1016 50S ribosomal protein L15 (AHRD V3.3 *** A0A2G3A9B7_CAPAN) AT5G64670 Solyc02g081320.4 534 466 548 490 580 510 491 335 459 396 579 413 391 564 684 Protein SET DOMAIN GROUP 40 (AHRD V3.3 *** A0A2G2XFT1_CAPBA) AT5G17240 Solyc02g081330.4 658 643 611 548 1241 1032 1103 1055 857 707 1000 809 487 566 1296 phytoene synthase 2,Pfam:PF00494 AT5G17230 Solyc02g081340.3 161 801 409 258 285 356 497 382 1293 417 313 991 2417 1255 1685 Glutathione S-transferase (AHRD V3.3 *** E1AWJ7_CAPAN) AT3G03190 Solyc02g081345.1 5 8 0 3 2 3 12 1 2 2 2 3 8 8 4 AMP-dependent synthetase/ligase (AHRD V3.3 *-* A0A200PYF6_9MAGN) Solyc02g081360.4 56 53 146 189 330 362 295 250 187 145 163 127 113 130 132 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200PYF6_9MAGN) Solyc02g081370.2 1 6 1 1 37 28 35 23 10 1 4 4 12 0 12 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200PYF6_9MAGN) AT1G66120 Solyc02g081380.3 679 787 1179 1088 1035 1091 1100 944 938 966 1118 925 1089 923 811 Ras-related protein Rab-5C (AHRD V3.3 *** A0A2G3A9R5_CAPAN) Solyc02g081390.3 556 789 624 783 693 626 771 583 1281 944 897 525 1211 812 530 Lysine-specific histone demethylase 1 (AHRD V3.3 *** B6SW44_MAIZE) AT1G65840 Solyc02g081400.3 825 664 571 493 423 408 421 544 726 664 457 524 769 591 792 Protein DJ-1 (AHRD V3.3 *** A0A2U1PKX3_ARTAN) AT3G02720 Solyc02g081410.3 1457 1907 1903 1260 1697 1787 1632 1708 1624 1248 1685 1512 2207 2096 1774 Beta-catenin-like protein 1-like (AHRD V3.3 *** A0A2K3P215_TRIPR) AT3G02710 Solyc02g081420.3 164 268 425 324 268 337 324 321 302 183 283 237 259 325 358 P-loop containing nucleoside triphosphate hydrolase (AHRD V3.3 *** A0A2U1NM30_ARTAN) Solyc02g081430.3 602 833 762 856 603 713 666 792 850 1074 826 815 1057 889 686 Microsomal glutathione s-transferase (AHRD V3.3 *** F4IBK9_ARATH) AT1G65820 Solyc02g081440.4 181 1020 1106 1648 3036 2776 2885 3330 1283 961 1187 2138 283 822 534 rho GTPase-activating protein (AHRD V3.3 *-* AT5G37010.1) AT5G37010 Solyc02g081450.2 150 152 91 77 60 35 29 47 93 66 132 57 81 111 216 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *-* Q9SLI0_ARATH) AT5G36970 Solyc02g081460.4 674 967 736 781 1256 920 801 1113 1012 874 597 938 829 798 795 Gamma-tubulin complex component (AHRD V3.3 *** A0A2G3A9L0_CAPAN) AT5G17410 Solyc02g081470.4 6 5 0 1 0 9 9 1 2 0 0 0 0 0 9 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3NGQ7_TRIPR) Solyc02g081480.4 303 112 185 141 32 37 23 37 78 124 164 58 154 198 154 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3NJB3_TRIPR) Solyc02g081500.3 1399 812 1004 755 285 305 319 318 534 895 1533 307 833 578 695 Receptor kinase LRK10 Solyc02g081510.3 25 10 2 18 0 2 0 0 4 11 10 6 29 10 44 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3PPP5_TRIPR) Solyc02g081520.3 632 463 429 390 518 476 488 504 493 509 342 506 367 474 372 Nijmegen breakage syndrome 1 (AHRD V3.3 *** A0A2U1MCL4_ARTAN) AT3G02680 Solyc02g081530.1 241 302 215 357 264 251 343 381 229 569 199 358 171 343 171 Plant organelle RNA recognition domain protein (AHRD V3.3 *** A0A072UXM1_MEDTR) AT1G06440 Solyc02g150133.1 45 39 26 64 64 78 78 54 51 35 52 41 73 47 46 Unknown protein Solyc02g081540.2 16 4 14 9 8 19 8 20 5 3 9 9 14 1 2 hypothetical protein (AHRD V3.3 *** AT5G36960.1) AT5G36960 Solyc02g081550.3 63 48 1 74 26 32 26 55 35 25 4 17 15 2 16 LeftsH6FtsH protease AT5G15250 Solyc02g081560.1 134 65 88 62 6 17 14 21 54 117 80 66 52 73 66 Methionyl-tRNA synthetase (AHRD V3.3 *** Q8RXY3_ARATH) AT5G10695 Solyc02g081570.4 113 104 218 182 130 97 82 121 101 161 144 168 81 122 99 YELLOW STRIPE like 8 (AHRD V3.3 *** A0A2U1PCK1_ARTAN) AT1G65730 Solyc02g081580.3 1618 1061 905 1064 1097 1058 1032 1209 856 1344 1066 1138 925 784 830 LRAT domain-containing protein (AHRD V3.3 *** A0A1Q3B136_CEPFO) AT3G02700 Solyc02g081590.3 4232 2187 1638 1287 1098 1070 934 1135 1761 2514 1665 1474 2876 1963 1447 FACT complex subunit SPT16 (AHRD V3.3 *-* A0A2G3C2X6_CAPCH) Solyc02g081600.4 262 369 409 409 511 409 415 433 597 521 482 271 853 402 404 Zinc transporter protein (AHRD V3.3 *-* A5BDR3_VITVI) Solyc02g081610.3 319 401 437 612 582 617 626 511 338 386 424 489 459 467 289 Phosphatidylinositol N-acetylglucosaminyltransferase (AHRD V3.3 *** A0A2U1P7N9_ARTAN) AT2G34980 Solyc02g081620.3 5236 4459 3626 4388 4142 3687 4350 4572 3360 4501 3251 4368 4024 4314 2653 Zinc finger (C2H2 type) family protein (AHRD V3.3 *** A0A1P8ASM0_ARATH) AT1G30970 Solyc02g081640.4 1616 1112 780 954 933 855 970 861 949 915 739 971 1033 1143 1045 Myb_DNA-binding domain-containing protein (AHRD V3.3 *** A0A1Q3B0N5_CEPFO) Solyc02g081650.3 1511 910 1171 924 954 1041 1115 964 905 957 1083 1117 914 931 1090 Enhancer of polycomb-like protein (AHRD V3.3 *** A0A1U8FX19_CAPAN) AT1G79020 Solyc02g081660.3 385 591 505 323 351 358 312 287 348 276 300 308 594 607 410 GTP-binding protein ERG (AHRD V3.3 *** A0A2G2V4X3_CAPBA) AT1G30960 Solyc02g081670.1 158 362 1033 1031 709 958 441 886 495 911 301 1619 18 941 106 anantha AT1G30950 Solyc02g081680.4 1223 1763 1541 977 963 911 1026 913 961 739 948 1188 2083 1858 1362 Nucleolar complex protein 2-like protein (AHRD V3.3 *** A0A2G2V4X2_CAPBA) AT2G18220 Solyc02g081690.1 236 242 252 342 506 394 290 483 415 608 428 565 293 379 314 Glycosyltransferase (AHRD V3.3 *** A0A2I4E012_9ROSI) Solyc02g081700.1 1659 2549 2375 2283 3096 2899 2753 2938 2665 2137 2091 2411 3500 2859 2253 Proteasome subunit alpha type (AHRD V3.3 *** A0A1U8FNG0_CAPAN) AT3G22110 Solyc02g081720.2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Polyol transporter 5 (AHRD V3.3 *-* A0A2G2V4U3_CAPBA) Solyc02g081730.3 274 899 612 866 1022 939 1061 1041 1377 1312 1154 1641 822 937 647 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (AHRD V3.3 *** A0A2G2V0L0_CAPBA) Solyc02g081740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1NYH9_ARTAN) Solyc02g081750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1NYH9_ARTAN) Solyc02g081760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1NYH9_ARTAN) Solyc02g081770.2 38 110 214 152 465 473 482 427 185 125 225 176 131 166 105 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc02g081780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 High mobility group B protein 2 (AHRD V3.3 *-* A0A2G3D313_CAPCH) AT5G18000 Solyc02g081800.1 4 0 1 6 0 5 1 1 6 9 9 6 5 3 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc02g081810.4 6236 10392 7253 4816 4710 4909 4369 5660 4854 3954 4894 5763 11772 10379 7341 H/ACA ribonucleoprotein complex subunit 4 (AHRD V3.3 *** A0A2G2XFE0_CAPBA) AT3G57150 Solyc02g081820.3 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1MTA1_ARTAN),Pfam:PF00702 Solyc02g081830.4 119 188 220 219 231 229 258 292 206 182 167 193 203 219 237 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1MTA1_ARTAN),Pfam:PF00702 AT5G44730 Solyc02g081840.4 376 409 463 505 277 294 377 242 280 246 356 301 491 472 541 translocator assembly/maintenance protein (AHRD V3.3 *** AT3G47630.6) AT3G47630 Solyc02g081850.4 360 212 404 363 163 174 167 173 277 377 404 162 220 252 664 Cationic amino acid transporter 1 (AHRD V3.3 *** A0A1U8FM22_CAPAN) Solyc02g081860.3 110 76 105 62 68 70 61 74 71 66 55 65 82 67 50 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XFC9_CAPBA) AT4G20090 Solyc02g081870.4 3 0 6 0 0 1 2 6 4 0 0 3 0 2 0 ABC transporter-like (AHRD V3.3 *** A0A200PWT6_9MAGN) AT2G29940 Solyc02g081880.3 1777 880 1412 1260 763 810 906 723 1489 1102 1610 1067 946 1114 1799 Molybdenum cofactor sulfurase (AHRD V3.3 *** A0A200QQK0_9MAGN) AT1G30910 Solyc02g081890.4 5 12 1 20 3 3 11 4 2 11 30 31 6 15 63 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) Solyc02g081900.4 49 41 51 35 37 30 64 22 27 18 66 31 40 38 65 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QB05_9MAGN) AT3G57430 Solyc02g081910.2 374 756 514 415 495 546 567 598 586 356 460 508 700 794 542 DNA topoisomerase 1 (AHRD V3.3 *** A0A1J3HC09_NOCCA) AT4G31210 Solyc02g081920.3 1103 1186 966 971 1023 1010 1059 1148 945 830 674 1170 1042 1305 1033 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic (AHRD V3.3 *** A0A1J3I115_NOCCA) AT4G20130 Solyc02g081930.3 80 119 65 179 168 137 147 150 94 133 71 164 110 78 44 pentatricopeptide repeat-containing protein At4g11690-like (AHRD V3.3 *-* A0A2I4FQS6_9ROSI) Solyc02g081940.3 644 649 423 382 416 377 354 496 534 357 390 437 697 636 489 multiple RNA-binding domain-containing protein 1 isoform X1 (AHRD V3.3 *** A0A2I4DTT0_9ROSI) AT4G19610 Solyc02g081950.4 551 785 858 867 905 982 935 885 724 751 803 831 812 675 585 RNA ligase/cyclic nucleotide phosphodiesterase (AHRD V3.3 *** A0A2U1MB77_ARTAN),Pfam:PF13563 AT5G40190 Solyc02g081960.3 5710 4224 2811 3316 2977 2768 2918 3606 2907 4146 2763 4109 3001 3722 2618 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (AHRD V3.3 *** F4HW92_ARATH) AT1G14650 Solyc02g081970.4 1015 413 276 221 27 23 31 20 124 301 105 56 627 486 224 Vacuolar-sorting receptor 1 (AHRD V3.3 *** A0A1U8FV38_CAPAN) AT1G30900 Solyc02g081980.3 983 2965 3051 2688 5436 4397 4605 5656 7690 6083 3713 7167 2511 2874 1356 Apyrase (AHRD V3.3 *** A0A2G2XFE6_CAPBA) Solyc02g081990.3 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G2XFI1_CAPBA) AT5G04960 Solyc02g082000.3 7773 12576 13918 10072 13330 13812 12773 13055 9347 7978 9192 10118 14656 12549 11090 40S ribosomal protein S15 (AHRD V3.3 *** A0A2G3D6Q0_CAPCH) AT5G09510 Solyc02g082010.3 340 569 680 514 671 618 653 629 580 553 651 642 524 621 593 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** Q9SD94_ARATH) Solyc02g082020.3 756 890 843 608 643 856 783 626 600 504 635 581 1000 850 649 Unknown protein AT1G30880 Solyc02g082030.3 477 438 512 550 602 584 497 585 605 588 411 609 638 609 374 Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic (AHRD V3.3 *** A0A2G3A9J3_CAPAN) AT3G20320 Solyc02g082035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g082040.3 13 40 36 8 9 1 1 0 8 22 15 2 52 5 41 R2R3MYB transcription factor 56 AT3G12720 Solyc02g082050.3 77 179 207 189 55 70 55 41 88 154 185 49 152 212 226 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3PDT8_TRIPR) AT5G17680 Solyc02g082060.2 1698 699 1474 2083 158 174 167 120 631 1274 1335 417 1154 1324 3208 PPPDE putative thiol peptidase family protein (AHRD V3.3 *** A0A2U1M5H1_ARTAN) Solyc02g082070.4 619 181 79 133 18 6 18 9 100 178 200 48 169 250 238 Cytochrome 71AV8 (AHRD V3.3 *** A0A2G2XFF3_CAPBA) Solyc02g082080.1 1907 1659 1329 1523 1826 960 855 1597 1916 3386 2692 1205 1838 1315 2309 Copper transporter (AHRD V3.3 *** E9LK45_VITVI) AT5G20650 Solyc02g082090.3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4BA79_SOLLC) AT1G30870 Solyc02g082100.4 251 500 702 689 844 974 913 823 707 513 706 573 364 352 505 RING/U-box superfamily protein (AHRD V3.3 *-* F4IIX4_ARATH) Solyc02g082110.4 1998 817 627 516 455 364 343 444 749 920 725 645 520 623 789 Zinc finger transcription factor 18 Solyc02g082120.3 3588 2796 3374 2740 2403 2330 2652 2075 3500 5045 5374 2559 1913 2278 5611 DNA-3-methyladenine glycosylase I (AHRD V3.3 *** B6TPB7_MAIZE) AT5G44680 Solyc02g082125.1 7 2 2 11 0 3 2 6 2 3 0 3 2 6 3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L2B9_TRIPR) Solyc02g082130.2 2379 3469 3026 1911 2803 2667 2262 2850 2537 2118 2096 2330 4156 3168 2245 Surfeit locus protein 6 (AHRD V3.3 *** A0A2U1QM59_ARTAN) AT5G05210 Solyc02g082140.3 2680 1497 1658 1449 862 834 815 929 1155 1987 2502 1220 1092 1209 2173 galactan beta-1,4-galactosyltransferase GALS3 (AHRD V3.3 *** A0A2I4EYQ4_9ROSI) AT4G20170 Solyc02g082150.1 23 39 156 18 29 21 32 26 22 33 127 17 34 18 127 BnaCnng18720D protein (AHRD V3.3 *** A0A078IGP5_BRANA) AT4G20190 Solyc02g082160.2 79 74 54 78 74 90 67 92 58 40 43 66 68 81 43 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QWV0_9MAGN) Solyc02g082170.3 0 46 99 42 1119 757 637 1128 67 47 249 213 116 51 9 Purine permease (AHRD V3.3 *** A0A2P5EE53_TREOI),Pfam:PF16913 AT1G30840 Solyc02g082180.3 405 2457 1959 1652 2863 2734 2872 3403 2607 1543 1571 2523 1994 2723 800 DNA helicase (AHRD V3.3 *** A0A2G2XFH5_CAPBA) AT5G44635 Solyc02g082190.3 1176 1311 925 864 1096 1012 1052 1081 671 1047 651 845 1473 1209 918 CTP synthase (AHRD V3.3 *** A0A2G2XFG8_CAPBA) AT1G30820 Solyc02g082200.4 582 749 934 806 894 836 974 870 842 782 961 707 965 824 936 Glutaredoxin (AHRD V3.3 *-* A0A200PXX9_9MAGN) AT3G54900 Solyc02g082210.4 458 530 560 601 547 526 619 562 533 554 604 602 470 661 628 transmembrane protein (AHRD V3.3 *** AT3G26950.1) AT3G26950 Solyc02g082220.3 2979 3496 2623 2955 2867 2624 2895 3741 3045 3476 2179 2933 3228 3254 2861 Protein transport protein Sec24-like (AHRD V3.3 *** A0A1J3HPV9_NOCCA) AT3G07100 Solyc02g082230.4 972 1133 919 790 1255 1215 1253 1205 1066 980 853 1064 981 1037 1002 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A2G2XFJ1_CAPBA) AT5G63870 Solyc02g082240.1 11 3 6 12 0 8 4 5 12 5 18 7 1 8 84 Unknown protein Solyc02g082250.4 557 1076 994 806 994 1017 830 1130 810 609 727 756 1366 1005 669 Thioredoxin reductase (AHRD V3.3 *** A0A2G3D6M1_CAPCH) AT2G17420 Solyc02g082260.3 1732 8477 8996 11728 13547 13129 13004 12319 20831 18044 33397 34977 4856 11075 15507 3-hydroxy-3-methylglutaryl CoA reductase AT1G76490 Solyc02g082270.3 5377 1585 1924 1743 633 841 826 569 995 3441 2185 923 967 1476 2250 RNA-binding protein 38-like (AHRD V3.3 *** A0A2I4G7F9_9ROSI) AT1G76460 Solyc02g082280.3 1311 1240 1612 1370 1275 1408 1536 1351 1305 1366 1729 1127 1298 1297 1607 Trafficking protein particle complex subunit 11 (AHRD V3.3 *** A0A1J3ESW4_NOCCA) AT5G65950 Solyc02g082290.4 457 342 438 392 242 287 261 313 438 389 307 406 328 446 464 Histidine kinase-like ATPase domain, Zinc finger, CW-type (AHRD V3.3 *** A0A2U1PNY4_ARTAN) Solyc02g082300.3 37 55 55 68 72 60 67 70 52 47 53 58 45 47 54 AT-hook motif nuclear-localized protein 10 (AHRD V3.3 *** A0A2G3A9R6_CAPAN) Solyc02g082310.2 71 100 75 67 132 133 110 132 113 80 76 119 136 79 110 Receptor-like protein kinase (AHRD V3.3 *-* A0A2K3P7F7_TRIPR) Solyc02g082315.2 20 12 0 15 7 9 3 6 4 9 7 3 12 6 14 F-box protein At4g19940 (AHRD V3.3 --* FB238_ARATH) Solyc02g082320.1 2 1 1 0 0 0 0 2 0 0 0 0 0 1 0 F-box domain (AHRD V3.3 *-* A0A200PSM3_9MAGN) Solyc02g082330.1 17 19 2 6 8 2 1 7 10 5 3 10 15 11 0 Unknown protein Solyc02g082340.3 10141 5223 3660 3600 3073 3341 3261 3023 3223 3974 3064 3151 3456 3719 4739 RNA polymerase I-specific transcription initiation factor RRN3 (AHRD V3.3 *** A0A2I4H2G7_9ROSI) AT2G34750 Solyc02g082350.3 551 516 600 583 620 588 639 610 554 598 699 538 456 454 628 Plant intracellular Ras-group-related LRR protein (AHRD V3.3 *** A0A2R6Q1R9_ACTCH) AT4G35470 Solyc02g082360.4 70 64 35 45 57 48 43 36 22 28 12 12 117 77 68 Eukaryotic translation initiation factor 6 (AHRD V3.3 *** A0A2I4DGM7_9ROSI) Solyc02g082370.1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 transcription factor MYBS3 (AHRD V3.3 --* XP_021274588.1) Solyc02g082375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G3C4H9_CAPCH) Solyc02g082390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G3C4H9_CAPCH) Solyc02g082400.4 616 541 493 463 348 401 371 353 338 318 418 347 521 574 728 Transcription factor jumonji (JmjC) domain-containing protein (AHRD V3.3 *** C0SV12_ARATH) Solyc02g082410.4 30 34 93 101 77 102 86 78 50 24 51 64 27 58 107 Tonoplast monosaccharide transporter 3 Solyc02g082420.3 616 493 492 675 829 816 820 729 528 551 622 533 440 558 1087 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN) Solyc02g082430.4 592 507 648 438 419 452 504 475 768 846 730 551 632 654 559 MLO-like protein (AHRD V3.3 *** K4BAB3_SOLLC) AT5G65970 Solyc02g082440.2 857 672 616 652 450 369 438 331 408 764 494 246 474 501 506 Unknown protein Solyc02g082450.3 458 252 18 48 7 12 6 6 28 128 1 24 131 75 67 Auxin efflux carrier (AHRD V3.3 *** A0A200PYL2_9MAGN) AT2G17500 Solyc02g082460.3 2371 2299 1725 1691 1815 1753 1905 1773 1948 1685 1365 1712 2382 2415 1675 Ribonuclease II family protein (AHRD V3.3 *** A0A2U1MGF5_ARTAN) AT2G17510 Solyc02g082470.4 2218 1666 1430 1317 1583 1469 1439 1774 2008 2389 1437 2028 1350 1538 1633 Serine/threonine-protein kinase/endoribonuclease IRE1b (AHRD V3.3 *** A0A2G3D760_CAPCH) AT2G17520 Solyc02g082480.3 561 782 730 770 1056 840 944 1065 995 1070 739 921 878 911 774 glutamate receptor-like 3.5 AT3G51480 Solyc02g082490.4 175 208 194 246 392 419 414 374 178 182 180 221 223 179 184 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1LH09_ARTAN) AT3G51470 Solyc02g082500.1 474 761 609 565 752 722 632 628 612 405 502 548 804 657 564 50S ribosomal protein L11 (AHRD V3.3 *** B4FC48_MAIZE) AT4G35490 Solyc02g082510.1 189 147 144 103 95 82 74 70 99 107 139 73 108 92 55 Amino acid transporter (AHRD V3.3 *** A0A200PYH9_9MAGN) AT4G38250 Solyc02g082520.3 1 1 0 0 0 5 1 1 0 0 0 0 0 2 0 Amino acid transporter (AHRD V3.3 *** A0A200PYH9_9MAGN) Solyc02g082540.4 7038 4634 3142 3703 3411 3375 3584 4035 3997 4747 3337 3691 3564 4095 4044 Calcium-binding EF hand family protein (AHRD V3.3 *** A0A1P8AQ08_ARATH) AT1G21630 Solyc02g082550.3 172 154 298 207 175 179 216 144 239 131 318 188 185 209 245 Protein kinase - like protein (AHRD V3.3 *** O81783_ARATH) AT2G17530 Solyc02g082560.1 90 43 90 45 26 31 34 30 31 63 9 27 36 56 37 CTP synthase (AHRD V3.3 *-* V4LDK1_EUTSA) Solyc02g082570.3 964 1051 939 1002 1038 962 921 935 1185 747 973 939 1233 1176 1160 PHD finger-like protein (AHRD V3.3 *** AT4G35510.1) Solyc02g082590.3 109 65 40 66 40 48 58 56 66 52 26 63 62 77 42 Protease Do-like 14-like protein (AHRD V3.3 *-* A0A2K3MMS3_TRIPR) Solyc02g082600.4 136 66 61 112 63 39 76 19 51 64 85 55 61 103 70 Trypsin family protein with PDZ domain-containing protein (AHRD V3.3 *-* A0A178UPC0_ARATH) Solyc02g082610.1 7 3 75 7 4 7 7 6 3 11 84 7 29 7 37 Unknown protein Solyc02g082630.2 13 18 38 35 8 19 11 11 22 28 18 11 22 26 29 Phosphoinositide phosphatase family protein (AHRD V3.3 *-* A0A2U1LC37_ARTAN) Solyc02g082633.1 173 130 401 135 87 68 91 34 127 96 328 90 92 140 230 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc02g082635.1 145 118 229 144 45 54 68 36 73 38 223 50 68 107 98 Unknown protein Solyc02g082637.1 67 58 82 74 49 41 34 22 25 29 58 17 64 42 43 Unknown protein Solyc02g082660.3 257 435 808 559 600 717 802 808 575 672 649 628 493 520 446 DNA mismatch repair protein MLH3 (AHRD V3.3 *** A0A2G3A9Q9_CAPAN) AT4G35520 Solyc02g082670.3 1006 1011 1179 924 880 789 730 746 1226 1227 1281 983 1560 1168 1740 WUSCHEL-related homeobox 13 (AHRD V3.3 *** A0A1U8FNS5_CAPAN) AT4G35550 Solyc02g082680.4 748 740 1195 751 494 584 574 513 1488 827 1168 703 550 722 1194 RB1-inducible coiled-coil protein (AHRD V3.3 *** AT2G17550.1) AT2G17550 Solyc02g082690.3 404 448 672 603 857 808 706 929 709 614 456 858 371 620 528 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1QAZ8_ARTAN) AT4G35560 Solyc02g082700.3 4772 7460 7941 6501 8307 8116 7678 8510 8225 7056 7911 8912 5026 6952 6446 High mobility group family (AHRD V3.3 *** S8EDU2_9LAMI) AT1G20693 Solyc02g082710.3 194 135 153 156 123 89 119 120 130 150 125 166 211 147 127 tail-anchored protein insertion receptor WRB-like protein (AHRD V3.3 *** AT4G16444.1) AT4G16444 Solyc02g082720.4 39 70 51 84 113 110 99 86 59 52 75 104 71 129 83 Protease Do-like 14-like protein (AHRD V3.3 *** A0A2K3MMS3_TRIPR) Solyc02g082725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g082730.3 1502 1304 924 1602 1320 1163 1311 1492 1241 1496 1029 1312 1021 1244 1190 Guanosine nucleotide diphosphate dissociation inhibitor (AHRD V3.3 *** A0A2U1LSZ7_ARTAN) AT3G06540 Solyc02g082733.1 6 4 2 8 4 2 0 0 1 3 1 2 1 0 0 Unknown protein Solyc02g082737.1 28 2 6 15 0 0 0 0 7 7 1 0 8 9 22 Unknown protein Solyc02g082740.1 1587 810 554 1031 259 184 206 227 440 1225 710 343 3152 1462 760 Dirigent protein (AHRD V3.3 *** K4BAE4_SOLLC) Solyc02g082750.4 3 6 1 9 11 3 8 4 1 0 0 3 2 6 0 Phosphoinositide phosphatase family protein (AHRD V3.3 *** A0A2U1LC37_ARTAN) AT5G66020 Solyc02g082760.3 7458 5188 2008 2688 3876 3299 2962 4439 4240 5947 1705 3276 4210 1979 2021 ethylene-responsive catalase AT4G35090 Solyc02g150134.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g150135.1 3 4 0 0 0 0 0 0 0 0 0 0 4 2 0 Unknown protein Solyc02g082770.3 314 225 331 446 93 126 127 64 117 164 269 101 150 187 367 Phosphoinositide phosphatase family protein (AHRD V3.3 *-* A0A2U1LC37_ARTAN) Solyc02g082775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g082780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g082790.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g082800.3 4118 4557 3205 3346 4410 3654 3707 5012 4716 4829 3072 4283 4401 4059 2816 Ubiquitin domain-containing protein DSK2b (AHRD V3.3 *** A0A2G2XFV2_CAPBA) AT2G17200 Solyc02g082810.3 507 425 415 299 329 405 353 345 457 308 433 366 493 510 406 Poly(A) polymerase I (AHRD V3.3 *** A0A1J3HIS1_NOCCA) AT2G17580 Solyc02g082820.3 59 485 396 667 944 1077 1081 903 555 249 495 587 56 348 277 cyclin B2 Solyc02g082830.3 1478 5929 2671 5757 5570 3440 3803 6040 4745 3842 2739 4038 5909 6140 3031 Phosphoserine aminotransferase (AHRD V3.3 *** A0A328DLJ5_9ASTE) AT4G35630 Solyc02g082840.3 769 994 1081 864 899 880 908 857 1317 864 1050 1047 934 1042 1209 Protein GRIP (AHRD V3.3 *** A0A1U8FMA7_CAPAN) AT5G66030 Solyc02g082850.3 369 335 290 425 448 437 403 476 317 300 476 257 604 380 388 Serine acetyltransferase 2 (AHRD V3.3 *** A0A2G3D7B8_CAPCH) AT4G35640 Solyc02g082860.3 132 270 199 193 214 350 300 318 233 191 379 211 366 262 231 Isocitrate dehydrogenase [NAD] subunit, mitochondrial (AHRD V3.3 *** A0A2P6TV14_CHLSO) Solyc02g082870.4 10 15 36 28 0 5 5 6 15 16 69 13 7 16 23 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNJ1_9MAGN) AT2G17650 Solyc02g082880.2 2 5 12 10 18 14 3 5 0 0 1 3 18 6 17 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNF3_9MAGN) AT2G17650 Solyc02g082890.1 5 7 6 9 9 6 4 6 1 2 0 5 0 6 11 RING/U-box superfamily protein (AHRD V3.3 *-* F4ILN3_ARATH) AT5G37280 Solyc02g082900.3 1756 549 271 308 142 172 174 188 258 425 237 230 418 620 407 Protein STRICTOSIDINE SYNTHASE-LIKE 6 (AHRD V3.3 *** A0A2G2XFW5_CAPBA) AT3G51440 Solyc02g082910.4 40 20 67 22 0 0 2 0 10 44 23 8 80 47 4 Acyl-CoA synthetase (AHRD V3.3 *** A0A1Y0KWS9_9PSED) Solyc02g082920.4 3092 2993 1326 1148 14 8 8 7 2145 4521 3253 253 10554 4873 2429 acidic extracellular 26 kD chitinase Solyc02g082930.3 6775 4164 4316 2427 590 758 588 851 3806 3265 3428 941 11802 6235 7706 acidic extracellular 27 kD chitinase Solyc02g082940.3 2 12 10 21 12 11 9 19 4 2 6 4 4 5 0 Protein trichome birefringence-like 34 (AHRD V3.3 *-* A0A2G3D7B4_CAPCH) Solyc02g082950.3 74 44 64 36 77 75 26 53 41 48 45 50 90 56 43 Protein trichome birefringence-like 34 (AHRD V3.3 *** A0A2G3D7E9_CAPCH) Solyc02g082960.3 16 1 0 7 0 0 1 5 1 3 3 11 3 5 3 Chitinase (AHRD V3.3 *** Q9FS45_VITVI) Solyc02g082970.1 497 723 496 625 532 383 351 566 591 494 393 630 838 715 475 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XFX3_CAPBA) AT2G17670 Solyc02g082980.1 4 0 2 1 0 3 5 6 0 0 0 0 2 1 0 DUF241 domain-containing protein (AHRD V3.3 *** A0A1Q3CEB1_CEPFO) AT4G35680 Solyc02g082990.4 0 3 2 0 0 0 0 0 1 0 2 0 0 0 0 Late embryogenesis abundant protein (LEA) family protein (AHRD V3.3 *** A0A2U1ND46_ARTAN) AT5G38760 Solyc02g083000.1 11 7 1 0 0 0 0 0 2 5 6 8 2 16 28 DUF241 domain-containing protein (AHRD V3.3 *** A0A1Q3CEB1_CEPFO) AT4G35690 Solyc02g083005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g083010.1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF241 domain-containing protein (AHRD V3.3 *** A0A1Q3CEB1_CEPFO) AT4G35690 Solyc02g083020.1 61 7 15 11 2 3 1 0 8 22 49 15 3 9 16 DUF241 domain-containing protein (AHRD V3.3 *** A0A1Q3CEB1_CEPFO) AT4G35690 Solyc02g083030.1 33 10 19 7 0 1 0 0 4 14 12 17 0 9 32 DUF241 domain-containing protein (AHRD V3.3 *** A0A1Q3CEB1_CEPFO) AT4G35690 Solyc02g083040.1 18 3 19 7 0 0 0 0 8 27 22 5 2 7 13 DUF241 domain-containing protein (AHRD V3.3 *** A0A1Q3CEB1_CEPFO) AT4G35690 Solyc02g083050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heat shock protein 90-1 (AHRD V3.3 *-* A0A2G2XG09_CAPBA) AT4G35690 Solyc02g083060.1 3 9 0 8 1 11 4 7 13 8 10 16 0 2 0 Unknown protein Solyc02g083070.2 2 7 2 8 4 0 3 6 21 2 36 5 0 4 0 Heat shock protein 90-1 (AHRD V3.3 *-* A0A2G2XG09_CAPBA) AT4G35690 Solyc02g083075.1 1 3 5 0 6 2 1 0 2 0 0 1 0 0 0 Unknown protein Solyc02g083090.1 50 21 48 38 38 34 15 31 71 73 110 102 14 37 32 Heat shock protein 90-1 (AHRD V3.3 *-* A0A2G2XG09_CAPBA) AT4G35690 Solyc02g083100.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 DUF241 domain-containing protein (AHRD V3.3 *-* A0A1Q3CEB1_CEPFO) Solyc02g083110.1 2300 1801 1399 1493 2179 1766 1532 2057 2096 2338 1778 2200 1588 1467 1687 DUF641 domain-containing protein (AHRD V3.3 *** A0A1Q3C2N9_CEPFO) AT5G58960 Solyc02g083120.3 158 70 118 133 37 34 24 39 117 236 97 117 113 101 192 DUF241 domain-containing protein (AHRD V3.3 *** A0A1Q3CEB1_CEPFO) AT4G35720 Solyc02g083130.4 1720 1373 1705 1711 1668 1581 1534 1649 1725 1906 2188 1572 926 1571 2815 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *** F4JNS8_ARATH) AT4G35730 Solyc02g083140.3 508 480 527 481 370 477 464 401 334 239 369 331 469 603 493 ribonuclease E AT2G04270 Solyc02g083150.3 408 458 390 464 510 508 556 517 476 382 396 505 437 447 384 S-acyltransferase (AHRD V3.3 *** M0ZMP8_SOLTU) AT3G51390 Solyc02g083160.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase At5g33370-like (AHRD V3.3 *** A0A2G3A9S5_CAPAN) Solyc02g083170.3 826 443 501 245 251 265 234 349 378 639 371 419 431 391 278 F-box family protein (AHRD V3.3 *** A0A2K3PD56_TRIPR) Solyc02g083180.4 1151 602 549 661 602 527 530 396 530 658 678 621 621 604 718 UPF0548 protein (AHRD V3.3 *** A0A1U8FXK9_CAPAN) AT2G17695 Solyc02g083190.2 454 507 526 532 392 333 329 326 511 571 988 597 455 393 409 F-box family protein (AHRD V3.3 *** A0A2K3NMJ9_TRIPR) Solyc02g083210.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2G2YCL7_CAPAN) Solyc02g083220.2 2168 1537 1583 1569 1017 1222 1322 977 1261 1259 1235 1200 1379 1572 1358 DNA-directed RNA polymerase subunit (AHRD V3.3 *-* A0A1U8FXJ4_CAPAN) Solyc02g083250.3 3912 2081 1313 1435 2528 2513 2792 2397 1647 5066 1839 2542 786 1730 1496 Cellular retinaldehyde-binding/triple function, C-terminal (AHRD V3.3 *** B6SN40_MAIZE) AT4G35750 Solyc02g083260.3 436 384 445 491 445 482 464 395 332 406 344 435 400 435 432 GPI mannosyltransferase 1 (AHRD V3.3 *** A0A2G3D7F0_CAPCH) AT5G22130 Solyc02g083270.4 2244 1328 1599 1621 1168 1175 1294 1085 1215 1659 1521 1389 1385 1293 1503 anti-PCD protein 2 AT4G35760 Solyc02g083280.4 2770 711 296 767 550 551 483 369 597 1599 847 444 320 394 944 Rhodanese-like domain (AHRD V3.3 *** A0A200R010_9MAGN) AT4G35770 Solyc02g083285.2 2 25 22 9 10 17 25 15 4 7 11 7 10 6 0 Protein IQ-DOMAIN 31 (AHRD V3.3 *-* A0A1J3ETM1_NOCCA) AT3G51380 Solyc02g083290.4 1517 886 912 868 1115 954 965 1174 956 1028 928 912 809 969 982 Protein kinase domain (AHRD V3.3 *** A0A200QZU4_9MAGN) AT4G35780 Solyc02g083300.2 0 0 0 0 3 3 6 1 1 0 0 0 0 0 0 Unknown protein Solyc02g083310.3 948 508 903 852 681 775 939 582 818 1254 1340 1067 522 870 1909 Bifunctional nuclease 2 (AHRD V3.3 *** A0A1J3GME9_NOCCA) AT5G66050 Solyc02g083320.3 5302 1413 1277 1312 1071 1156 1227 1115 1144 1698 1829 1459 1241 1409 1844 RNA-binding (RRM/RBD/RNP motif) family protein (AHRD V3.3 *-* A0A2K3NPI1_TRIPR) Solyc02g083330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g083340.4 753 1370 951 846 1342 1227 1255 1471 1359 916 858 1065 960 1154 860 Phospholipase D (AHRD V3.3 *** K4BAK2_SOLLC) AT4G35790 Solyc02g083350.4 11370 11871 8639 22112 10216 9595 15039 12719 7837 17993 8711 12511 11122 13107 7269 RNA polymerase 2 largest subunit 1 Solyc02g083360.1 170 130 125 104 147 102 89 102 118 164 104 111 139 127 117 Protein methionine S-oxide reductase (AHRD V3.3 *** A0A2K3M6B6_TRIPR) AT2G17705 Solyc02g083370.1 37 20 55 34 19 29 47 24 19 25 29 23 16 25 37 Unknown protein Solyc02g083380.3 251 136 120 136 78 81 105 66 135 101 83 52 110 110 64 Big1 (AHRD V3.3 *-* AT2G17710.1) Solyc02g083390.4 570 723 590 586 793 695 681 694 808 823 731 750 788 795 679 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4JZ25_ARATH) AT5G66060 Solyc02g083400.3 338 74 136 150 57 59 84 48 80 159 120 137 100 117 102 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1ML59_ARTAN) AT4G35840 Solyc02g083410.4 390 188 234 257 171 227 284 220 220 433 278 191 73 167 272 Phytoene dehydrogenase chloroplastic chromoplastic-like (AHRD V3.3 *** A0A2K3LEN1_TRIPR) AT3G09580 Solyc02g083420.3 1081 767 1338 965 1192 1328 1297 1160 1024 845 1095 868 684 858 915 Protein phosphatase 2C homolog (AHRD V3.3 *** Q9ZSQ7_MESCR) AT4G38520 Solyc02g083430.1 393 442 372 372 366 331 296 376 383 550 340 424 378 359 321 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *-* A0A1P8AWL1_ARATH) AT4G35870 Solyc02g083440.3 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 Peptidase A1 (AHRD V3.3 *-* A0A1R3GCG2_COCAP) Solyc02g083450.3 225 392 439 642 683 735 687 655 482 446 422 566 352 507 380 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1LT79_ARTAN) AT4G35880 Solyc02g083460.3 2214 1007 1161 1096 449 440 375 396 819 1204 1181 539 1171 1232 1283 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1KXY4_ARTAN) AT2G17760 Solyc02g083470.3 1367 2216 1880 1221 1042 1357 1081 1095 1458 800 1561 1216 2898 2541 1971 pre-rRNA-processing protein esf1 (AHRD V3.3 *** A0A2I4FDA5_9ROSI) AT3G01160 Solyc02g083480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 180 Peroxidase (AHRD V3.3 *** K4BAL6_SOLLC) Solyc02g083490.3 14 285 139 299 117 90 97 73 111 125 177 27 103 121 1162 Peroxidase (AHRD V3.3 *** K4BAL7_SOLLC) Solyc02g083500.3 454 615 518 611 813 709 706 857 534 598 450 600 520 538 434 cell wall integrity/stress response component (AHRD V3.3 *** AT5G66090.1) AT5G66090 Solyc02g083510.3 0 1 10 4 9 9 1 1 1 1 0 0 0 1 0 plasma membrane intrinsic protein 2.11 Solyc02g083520.2 1270 711 496 587 1309 1080 898 1083 536 812 635 844 378 373 271 self-pruning G-box protein AT4G35900 Solyc02g083525.1 0 3 1 6 1 3 2 3 2 2 0 0 3 0 0 cell wall integrity/stress response component (AHRD V3.3 *-* AT5G66090.1) Solyc02g083540.3 537 686 1218 1103 1256 1157 1092 1165 920 843 1031 1083 719 893 953 PLAC8 family protein (AHRD V3.3 *** AT2G17780.7) AT4G35920 Solyc02g083550.2 4 2 4 4 0 3 3 1 1 1 2 5 2 3 0 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6RBQ1_ACTCH) Solyc02g083560.3 1233 1401 1688 1582 1498 1504 1642 1485 1497 1265 1437 1214 1444 1575 1629 Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** A0A2G2XG54_CAPBA) AT2G17790 Solyc02g083570.3 463 630 793 1165 535 393 462 360 434 452 555 256 597 488 891 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200RAU7_9MAGN) Solyc02g083580.4 443 1341 1985 1547 2383 2950 2809 2520 1298 1115 1802 1831 950 1334 1092 Rac-like GTP binding protein (AHRD V3.3 *** Q9S821_PHYPA) AT2G17800 Solyc02g083590.3 1533 2153 1398 1603 2597 1987 1999 2697 2000 3198 1460 2338 2102 2166 1169 dehydroquinate synthase AT5G66120 Solyc02g083600.4 91 127 96 89 96 94 137 93 107 127 60 133 159 111 80 Cell cycle checkpoint protein RAD17 (AHRD V3.3 *** A0A2G2XG79_CAPBA) AT5G66130 Solyc02g083610.4 908 1379 1601 1572 1983 1794 1851 2169 1162 1349 1038 2260 1196 1639 808 Ras domain-containing protein/DUF632 domain-containing protein/DUF630 domain-containing protein (AHRD V3.3 *** A0A1Q3BAN2_CEPFO) AT3G51290 Solyc02g083620.3 149 143 327 300 278 242 229 130 200 209 453 138 148 232 449 Ascorbate peroxidase (AHRD V3.3 *** Q39780_GOSHI) Solyc02g083630.3 219 309 767 580 414 305 335 172 446 463 1035 378 220 300 613 Ascorbate peroxidase (AHRD V3.3 *** Q39780_GOSHI) Solyc02g083640.4 146 1017 1290 2140 3165 3563 3276 3663 1364 981 1404 1894 147 783 798 Protein POLLENLESS 3-LIKE 2 (AHRD V3.3 *** A0A2G3D7L3_CAPCH) AT3G51280 Solyc02g083650.3 344 437 691 794 805 880 881 583 495 347 588 611 540 551 660 hypothetical protein (AHRD V3.3 *** AT4G35980.1) AT4G35980 Solyc02g083670.4 559 456 644 720 402 366 416 296 384 299 693 219 492 522 1177 Histidine kinase 1 (AHRD V3.3 *** A0A2G3AA52_CAPAN) AT2G17820 Solyc02g083660.1 346 337 378 359 211 241 230 266 280 347 330 293 268 266 280 RING/U-box superfamily protein (AHRD V3.3 *-* Q9M176_ARATH) Solyc02g083690.2 25 16 26 22 8 5 14 15 15 25 29 25 6 13 13 Senescence/dehydration-associated protein-like protein (AHRD V3.3 *** A0A1P8AYB1_ARATH) AT2G17840 Solyc02g083700.4 30 75 193 116 117 81 92 55 166 137 411 140 136 121 214 Alpha-mannosidase (AHRD V3.3 *** A0A1U8FVM7_CAPAN) AT5G66150 Solyc02g083710.3 1498 2206 2224 1894 2221 2562 2335 2624 2589 1957 1906 2171 2744 2355 1870 26S proteasome non-ATPase regulatory subunit 4-like protein (AHRD V3.3 *** A0A2G2XGK6_CAPBA) AT4G38630 Solyc02g083720.4 58 44 76 54 76 76 75 71 65 68 85 112 29 78 51 MLO-like protein (AHRD V3.3 *** K4BAP0_SOLLC) Solyc02g083730.4 3 0 1 0 0 4 4 1 2 2 9 1 0 0 2 Rhodanese-like domain (AHRD V3.3 *** A0A200RA82_9MAGN) Solyc02g083740.2 75 47 44 132 31 44 56 63 60 42 107 49 48 61 180 Oligopeptide transporter (AHRD V3.3 *** A0A200RAW0_9MAGN) Solyc02g083750.1 1570 1302 1194 1163 973 926 871 1000 1191 1120 1242 1164 1449 1425 1237 DNA-binding storekeeper transcriptional regulator (AHRD V3.3 *-* A0A2K3LQD1_TRIPR) AT3G04930 Solyc02g083760.4 121 145 229 252 129 104 124 134 298 224 456 130 166 150 395 Thaumatin-like protein 1 (AHRD V3.3 *** A0A2G3D7H3_CAPCH) Solyc02g083765.1 47 37 88 51 64 69 69 27 44 28 49 42 35 42 60 Phosphotransferases/inositol or phosphatidylinositol kinase (AHRD V3.3 *-* F4JPL2_ARATH) Solyc02g083780.3 402 267 307 290 313 324 301 325 290 239 211 272 257 341 267 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PRT5_9MAGN) AT1G79540 Solyc02g083785.1 119 117 75 127 98 94 111 88 79 91 85 94 92 86 97 Unknown protein Solyc02g083790.4 69 77 119 108 160 140 135 164 112 70 91 94 86 120 98 Thaumatin-like protein 1 (AHRD V3.3 *** A0A1U8FP59_CAPAN) AT4G36010 Solyc02g083800.4 133 160 225 177 159 195 159 160 135 119 127 146 248 200 154 Cold-shock protein (AHRD V3.3 *-* A0A200RAC1_9MAGN) AT2G17870 Solyc02g083810.4 1207 2624 2029 2568 3086 2637 2806 3492 3454 2591 2124 2412 1786 1619 2338 Ferredoxin--NADP reductase, chloroplastic (AHRD V3.3 *** K4BAP9_SOLLC) Solyc02g150136.1 0 0 0 0 0 0 0 0 1 3 5 0 2 0 0 Unknown protein Solyc02g083820.1 428 427 466 377 390 438 460 499 552 441 543 436 436 403 434 Armadillo repeat only 2 (AHRD V3.3 *** Q9FKW5_ARATH) AT5G66200 Solyc02g083830.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A1U8FSJ6_CAPAN) Solyc02g083835.1 1408 435 342 323 217 193 396 206 168 949 265 140 151 181 347 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G2XG76_CAPBA) AT2G17880 Solyc02g083840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Unknown protein Solyc02g083850.3 93 186 215 71 151 114 98 100 131 439 265 111 197 128 24 Calcium-dependent kinase (AHRD V3.3 *** Q5D875_MEDTR) AT2G17890 Solyc02g083860.3 727 1420 552 879 639 639 595 564 2314 1140 1111 1611 2164 1244 1157 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QGX7_ARTAN) AT3G51240 Solyc02g083870.3 0 9 0 0 0 2 0 7 0 0 0 0 1 0 0 Gibberellin-regulated protein 3 (AHRD V3.3 *** A0A2G2XG94_CAPBA) Solyc02g083880.3 357 1316 5610 674 943 850 983 890 1324 3511 8599 1027 1021 598 553 Gibberellin-regulated protein 3 (AHRD V3.3 *** A0A1U8FMR2_CAPAN) Solyc02g083890.4 125 1013 1078 1372 2393 2093 1923 2424 1220 570 813 1407 188 704 583 Chalcone-flavanone isomerase family protein (AHRD V3.3 *** AT5G66230.1) AT5G66230 Solyc02g083900.3 4443 3865 3375 3376 3268 3378 3356 3754 4581 4571 3188 4146 3085 3733 3215 Transformation/transcription domain associated protein (AHRD V3.3 *** A0A2K3NKS8_TRIPR) AT2G17930 Solyc02g083910.4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 WEB family protein (AHRD V3.3 --* XP_004233736.1) Solyc02g083920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 WEB family protein At2g17940-like isoform X2 (AHRD V3.3 *** A0A2I4FN20_9ROSI) Solyc02g083930.1 1 6 24 1 5 2 3 2 4 2 3 12 9 11 0 BnaCnng52580D protein (AHRD V3.3 *-* A0A078JGY5_BRANA) Solyc02g083940.3 246 214 278 251 253 290 250 265 172 166 241 154 186 211 263 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1KR53_ARTAN) AT5G66240 Solyc02g083950.3 69 93 65 127 88 90 93 104 75 83 159 113 24 57 100 wuschel AT2G17950 Solyc02g083960.4 403 370 451 416 338 340 381 418 376 420 411 375 405 489 425 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1N614_ARTAN) AT2G17970 Solyc02g083980.3 1475 880 899 1132 783 878 866 627 650 677 1028 670 689 1020 1503 Endoglucanase (AHRD V3.3 *** A0A2G3D7Z9_CAPCH) Solyc02g083990.3 462 544 673 527 581 592 570 582 695 456 631 558 689 679 602 Polyamine-modulated factor 1-binding protein (AHRD V3.3 *** A0A1P8B2T5_ARATH) AT2G17990 Solyc02g084000.3 1069 911 826 908 841 974 1005 850 572 847 701 896 1016 936 811 Transcription initiation factor TFIID subunit 14b (AHRD V3.3 *** A0A2G3AAD6_CAPAN) Solyc02g084005.1 1 28 7 20 8 14 14 31 40 5 17 21 5 25 17 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A1U8FSJ8_CAPAN) Solyc02g084020.3 752 796 823 660 856 889 860 879 771 658 837 859 1003 827 931 Small nuclear ribonucleoprotein Sm D3 (AHRD V3.3 *** A0A1U8FVR8_CAPAN) AT1G20580 Solyc02g084030.3 339 511 497 610 796 843 825 684 535 478 606 509 543 590 578 Peptide methionine sulfoxide reductase MsrA (AHRD V3.3 *** A0A200QQ79_9MAGN) AT2G18030 Solyc02g084031.1 0 0 0 0 0 2 0 2 0 0 0 0 0 0 2 Ribonuclease H (AHRD V3.3 *-* A0A2K3NTL9_TRIPR) Solyc02g084032.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084034.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084036.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084038.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *-* A0A2U1LT79_ARTAN) Solyc02g084080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 68 (AHRD V3.3 *-* A0A1J3JFV0_NOCCA) Solyc02g084083.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084085.1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084087.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084100.3 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger CCCH domain-containing protein 68 (AHRD V3.3 *-* XP_010316414.1) Solyc02g084113.1 0 0 0 13 0 10 4 6 1 0 5 0 0 7 0 ATP-dependent Clp protease ATP-binding subunit ClpX (AHRD V3.3 *-* A0A2G2W8G5_CAPBA) Solyc02g150137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dimer_Tnp_hAT domain-containing protein (AHRD V3.3 *** A0A1Q3CIR7_CEPFO) Solyc02g084130.4 11 20 43 9 16 35 21 15 15 19 60 16 18 20 19 Unknown protein Solyc02g084140.3 0 7 1 0 2 5 0 0 1 0 0 6 0 1 0 Unknown protein Solyc02g084150.2 4 30 2 3 29 6 0 19 5 1 10 4 6 5 0 ATP-dependent Clp protease ATP-binding subunit ClpX (AHRD V3.3 *-* A0A2G3BUX0_CAPCH) Solyc02g084160.3 1 1 9 7 0 2 0 1 2 0 2 0 1 8 0 zinc finger CCCH domain-containing protein 68 (AHRD V3.3 *-* XP_010316414.1) Solyc02g084170.2 13 2 14 9 8 2 15 1 4 5 19 16 2 8 5 ATP-dependent Clp protease (AHRD V3.3 *-* A0A1P8BHS9_ARATH) Solyc02g084173.1 15 3 26 0 0 6 4 0 5 4 14 9 0 2 1 Unknown protein Solyc02g084177.1 1 1 0 2 2 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc02g084190.3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084200.3 8 48 42 14 71 59 39 52 32 22 16 49 78 43 6 Zinc finger transcription factor 19 Solyc02g084210.1 18 110 45 90 173 99 110 200 155 241 128 128 90 36 57 GDP-mannose 4,6-dehydratase (AHRD V3.3 *** A0A2G3CZP5_CAPCH) AT5G66280 Solyc02g084220.3 275 235 368 319 332 320 378 306 255 265 363 221 239 264 351 hypothetical protein (AHRD V3.3 *** AT5G66290.1) AT5G66290 Solyc02g084230.3 920 740 1203 1079 1214 1284 1120 933 1023 837 1553 1014 736 783 1344 GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN87_SOLLC) Solyc02g084240.3 32042 10464 11950 9833 4004 4119 3229 3659 6809 18221 19129 12789 4778 12357 20250 H1 histone-like protein AT2G18050 Solyc02g084245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084250.4 1 2 0 0 0 0 0 0 0 2 0 2 0 1 0 MUTL protein homolog 3 (AHRD V3.3 *-* AT4G35520.6) Solyc02g084260.3 11 6 8 10 1 2 1 1 3 0 22 1 2 3 0 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc02g150138.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SHAGGY-like kinase (AHRD V3.3 *-* M9WQC5_WHEAT) Solyc02g084280.3 24 23 30 42 8 16 20 12 22 12 49 21 8 25 43 nuclear pore complex protein NUP98B-like isoform X4 (AHRD V3.3 *-* XP_019068099.2) Solyc02g084290.3 24 3 3 10 1 7 2 5 2 1 8 8 0 3 0 CTP synthase 2 isoform X1 (AHRD V3.3 --* XP_010316211.1) Solyc02g084300.1 13 9 8 2 6 11 10 12 12 4 0 4 11 8 0 CTP synthase (AHRD V3.3 *-* A0A2G3D6N9_CAPCH) Solyc02g084303.1 21 14 11 9 14 11 20 15 14 7 10 24 21 10 4 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G3A9Q9_CAPAN) Solyc02g084305.1 71 48 41 35 32 55 44 30 15 15 25 18 29 18 12 Unknown protein Solyc02g084307.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084340.3 817 508 358 350 404 353 341 368 517 544 508 425 347 432 514 Pre-mRNA-splicing factor CWC25-like protein (AHRD V3.3 *** A0A1J3JVQ6_NOCCA) AT2G44200 Solyc02g150139.1 42 35 60 34 42 52 62 30 32 24 87 29 26 55 64 Unknown protein Solyc02g084350.3 12 46 70 72 26 34 19 18 24 33 35 24 34 42 72 NAC domain-containing protein (AHRD V3.3 *** A0A2K3PFA3_TRIPR) AT2G18060 Solyc02g084360.3 3406 3232 3289 4544 3641 3999 4322 3064 3062 3253 4100 3268 3270 2734 4047 V-type proton ATPase proteolipid subunit (AHRD V3.3 *** A0A2G3AAA7_CAPAN) AT1G19910 Solyc02g084370.2 231 1477 1757 1487 2408 2602 2532 2622 2084 831 2000 1962 1170 1577 990 Receptor-like protein kinase (AHRD V3.3 *** A0A0A0KGM3_CUCSA) AT4G36180 Solyc02g084380.3 413 314 330 246 242 154 191 154 231 218 376 245 405 405 428 Translation elongation factor EF1B/ribosomal protein S6 family protein (AHRD V3.3 *** Q9LSA1_ARATH) AT3G18760 Solyc02g084390.3 260 963 816 627 844 732 648 691 1092 711 1126 754 709 690 520 Kinesin-like protein (AHRD V3.3 *** A0A2G3AA92_CAPAN) AT3G51150 Solyc02g084400.4 164 274 144 340 219 236 291 212 282 301 237 239 235 180 227 Protein kinase superfamily protein (AHRD V3.3 *** F4I8V6_ARATH) AT1G11390 Solyc02g084410.3 443 198 703 856 12 10 7 5 154 221 209 53 219 203 99 Lactoylglutathione lyase (AHRD V3.3 *** A0A2K3LFU2_TRIPR) Solyc02g084420.3 246 304 8 192 329 250 281 270 115 157 15 114 304 34 3 Zinc finger, B-box (AHRD V3.3 *-* A0A2U1LAI4_ARTAN) Solyc02g084430.3 142 188 31 160 356 301 278 242 112 146 25 64 318 37 36 B-box zinc finger protein 19 (AHRD V3.3 *-* A0A2G3AAA5_CAPAN) Solyc02g084440.4 21537 18905 6955 11493 13192 11131 11786 13730 11691 14678 6985 8917 9119 5605 9936 Fructose-bisphosphate aldolase (AHRD V3.3 *** A0A2G3AA97_CAPAN) AT4G38970 Solyc02g074600.4 308 398 280 309 354 398 397 536 290 418 148 379 186 245 227 Unknown protein Solyc02g084450.4 751 746 676 625 739 887 972 801 630 603 498 699 672 660 562 NBS-LRR resistance protein (AHRD V3.3 *** A0A2K3NU03_TRIPR) Solyc02g084470.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc02g084480.3 2537 2055 1152 1608 1748 1380 1447 2191 1250 2614 857 1988 1205 1756 950 golgin candidate 6-like isoform X2 (AHRD V3.3 *-* XP_025885295.1) Solyc02g084490.1 3631 2733 1887 1580 2149 1879 1782 2266 2494 2325 1393 2082 1882 2210 1742 Golgin candidate 6 (AHRD V3.3 *** A0A2G2XK18_CAPBA) Solyc02g075610.4 3060 1896 1945 1848 1617 1966 1873 1411 1645 1443 1789 1606 1782 2012 2343 Golgin candidate 6 (AHRD V3.3 *-* A0A2G2XK18_CAPBA) Solyc02g075620.4 12 272 126 209 295 244 220 253 303 59 159 98 26 98 62 Pectinesterase (AHRD V3.3 *** A0A2G3D7Y1_CAPCH) Solyc02g075630.3 3359 1515 1385 1386 1264 1050 1091 1288 1181 2479 1208 1551 1304 1376 1284 UPF0183 protein (AHRD V3.3 *** A0A2G3D7Z6_CAPCH) Solyc02g084510.3 174 226 199 147 176 162 175 186 249 179 106 175 126 192 112 Zinc finger CCCH domain-containing protein 19 (AHRD V3.3 *-* A0A2G2XGC4_CAPBA) Solyc02g084520.3 1480 1357 1812 1791 1437 1773 1850 1236 1460 1209 1812 1335 1267 1836 2186 Zinc finger transcription factor 20 Solyc02g084530.2 8 13 13 37 23 29 38 13 20 13 32 36 21 37 40 Transmembrane/coiled-coil protein (DUF726) (AHRD V3.3 *-* B3H797_ARATH) Solyc02g084540.3 120 124 162 137 143 190 214 165 102 79 88 139 123 138 175 Transmembrane/coiled-coil protein (DUF726) (AHRD V3.3 *** F4JPN3_ARATH) Solyc02g084550.3 1212 887 992 876 761 846 762 684 761 905 1018 682 715 765 883 altered inheritance of mitochondria protein (AHRD V3.3 *** AT3G51100.1) AT3G51100 Solyc02g084560.4 79 65 133 89 105 138 119 106 112 89 76 103 81 78 82 Coiled-coil domain-containing protein 90B, mitochondrial (AHRD V3.3 *** A0A1J3GXX3_NOCCA) Solyc02g084570.4 491 430 458 332 189 222 172 155 290 274 270 202 375 275 337 Cytochrome P450 (AHRD V3.3 *** A0A2U1M5X8_ARTAN) AT4G36220 Solyc02g084590.4 1684 1753 1970 1455 2135 2334 2263 2020 1835 1593 1962 1898 1369 1634 1195 GATA transcription factor (AHRD V3.3 *** K4BAX4_SOLLC) AT5G66320 Solyc02g084600.4 50 63 85 25 61 104 100 83 30 22 31 31 24 39 36 Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* A0A061DFG6_THECC) Solyc02g084605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g084610.1 470 1134 939 832 2088 1788 1596 2199 1362 804 756 996 812 827 704 Leucine-rich repeat receptor-like protein kinase PXL2 (AHRD V3.3 *** A0A1J3GLI2_NOCCA) AT5G66330 Solyc02g084620.3 1923 990 658 688 592 694 675 787 948 1173 633 936 700 903 859 Forkhead-associated (FHA) domain (AHRD V3.3 *-* A0A200QTD2_9MAGN) AT1G75530 Solyc02g084630.3 2905 1567 2020 1787 977 991 912 739 752 1578 1125 1329 807 1165 1561 TDR6 transcription factor Solyc02g084640.4 529 779 533 689 698 707 682 720 850 454 492 708 671 684 896 Aldehyde dehydrogenase (AHRD V3.3 *** A0A1U8FMX3_CAPAN) AT4G36250 Solyc02g084650.3 205 253 342 308 431 447 402 332 223 218 400 248 258 288 412 UPF0651 protein, mitochondrial (AHRD V3.3 *** A0A2G3D7Z0_CAPCH) Solyc02g084660.3 711 701 537 667 551 508 500 627 550 836 500 595 745 723 597 Glutaredoxin-C4 (AHRD V3.3 *** A0A2G3D7Z3_CAPCH) AT1G77370 Solyc02g084670.4 8 6 13 33 38 27 22 35 13 25 12 17 6 9 1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PWQ7_ARTAN) AT3G51070 Solyc02g084680.3 641 607 1407 1006 800 914 607 702 695 715 1080 722 618 736 557 Protein SHI RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2G3AAR0_CAPAN),Pfam:PF05142 Solyc02g084690.3 3385 2221 1686 1505 1623 1714 1531 1844 1801 2350 1692 1964 2034 1856 2065 FG-GAP repeat-containing protein (AHRD V3.3 *** A0A2U1NP74_ARTAN) AT3G51050 Solyc02g084700.3 2296 1499 1732 1414 1355 1335 1259 1421 1441 1442 1515 1351 1862 1730 1867 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (AHRD V3.3 *** A0A1P8BEQ3_ARATH) AT4G36290 Solyc02g084710.3 257 500 694 639 438 466 437 483 568 467 708 583 545 632 483 Thioredoxin (AHRD V3.3 *** A0A1U8FW99_CAPAN) AT3G51030 Solyc02g084720.3 1769 4304 3865 5346 3829 4299 4421 3864 7362 5888 5749 5213 5724 4362 7411 beta-galactosidase 6 AT4G36360 Solyc02g084730.3 40 64 50 40 75 62 28 50 56 46 17 66 79 74 118 rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** A0A2G3AAP2_CAPAN) AT5G66360 Solyc02g084740.4 1989 1199 1164 1400 827 769 820 680 1177 1755 1268 1039 1398 1100 1581 Cytochrome P450 (AHRD V3.3 *** A0A200QE89_9MAGN) Solyc02g084750.4 733 783 643 611 807 681 648 777 719 688 582 629 612 721 553 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (AHRD V3.3 *** A0A2N3V1C6_9BACT) AT4G36390 Solyc02g084760.3 1239 967 1186 1067 1018 1027 999 1016 850 1521 969 907 1229 944 988 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QE21_9MAGN) AT5G42990 Solyc02g084770.3 304 295 331 298 395 365 407 372 348 438 368 401 414 380 299 Mitochondrial carrier protein, expressed (AHRD V3.3 *** Q6AVS9_ORYSJ) AT5G66380 Solyc02g084780.4 3 13 27 21 109 33 44 50 12 21 14 23 19 20 15 Peroxidase (AHRD V3.3 *** K4BAZ3_SOLLC) AT4G36430 Solyc02g084790.3 2 5 24 15 77 36 29 55 14 26 10 30 42 36 58 Peroxidase (AHRD V3.3 *** K4BAZ4_SOLLC) AT4G36430 Solyc02g084800.4 6 3 8 3 41 50 52 52 11 20 25 33 10 5 58 Peroxidase (AHRD V3.3 *** K4BAZ5_SOLLC) AT4G36430 Solyc02g084810.3 280 541 417 455 651 642 725 633 495 340 448 445 540 574 536 G-protein coupled receptor (AHRD V3.3 *** AT4G36440.1) AT4G36440 Solyc02g084820.3 691 1135 867 996 1607 1523 1306 1571 1188 924 930 1310 874 1023 776 UDP-Glycosyltransferase superfamily protein (AHRD V3.3 *** A0A2U1MZY9_ARTAN) AT1G75420 Solyc02g084830.4 158 195 131 171 161 192 189 225 168 134 166 215 119 222 154 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3D7W6_CAPCH) AT5G44230 Solyc02g084840.3 14155 1887 1064 427 56 99 41 73 454 2965 400 704 356 1381 1251 Dehydrin (AHRD V3.3 *** A0A2R4KWH2_9SOLN) AT5G66400 Solyc02g084850.3 10965 3439 17003 10448 58 94 105 40 12918 3485 12614 2310 4823 19907 85570 Abscisic acid and environmental stress-inducible protein TAS14 (AHRD V3.3 --* TAS14_SOLLC) Solyc02g084860.1 1 1 1 1 0 0 0 0 0 0 0 3 0 0 0 BZIP transcription factor (AHRD V3.3 *** I6MK31_PRUPE) AT4G34590 Solyc02g084870.3 663 458 916 764 502 485 457 332 586 841 1423 385 542 618 873 mitogen-activated protein kinase 8 Solyc02g084880.3 74 105 233 116 39 77 63 101 171 123 143 48 113 99 158 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1PMP2_ARTAN) Solyc02g084890.3 493 226 541 164 60 114 84 93 195 290 1345 274 207 221 426 Disease resistance RPP13-like protein 4 (AHRD V3.3 *** A0A2G2XGN6_CAPBA) AT3G50950 Solyc02g084900.2 686 741 667 535 765 607 391 683 605 1246 1180 1120 602 516 502 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NGS8_ARTAN) AT2G18193 Solyc02g084910.4 158 168 140 231 132 124 66 85 108 167 99 230 94 154 117 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NGY3_ARTAN) AT5G17760 Solyc02g084920.3 7009 5811 4462 4247 4391 4422 3989 4458 4277 4032 3987 4584 6033 5167 4629 fruit-specific protein TOM2A11 AT3G60820 Solyc02g084930.3 35 26 3 5 7 1 0 1 12 6 6 7 24 7 1 Cytochrome P450 (AHRD V3.3 *-* A0A200QE46_9MAGN) Solyc02g084940.1 66 17 23 53 38 55 53 28 31 25 18 40 39 17 10 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6S2J5_ACTCH) Solyc02g084950.3 1229 994 1407 823 2561 2295 2452 2095 1228 450 898 1029 1079 688 390 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1KPI6_ARTAN) AT4G36470 Solyc02g084960.1 81 267 289 251 730 605 458 761 139 188 277 562 319 275 146 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit (AHRD V3.3 *** AT5G66440.1) AT5G66440 Solyc02g084970.4 37 23 36 56 18 13 16 11 17 25 36 23 54 49 73 Phosphatidic acid phosphatase (AHRD V3.3 *** E5F729_9BRAS) AT5G66450 Solyc02g084980.3 1117 333 306 304 12 22 0 7 74 160 108 65 214 569 954 Hexosyltransferase (AHRD V3.3 *** A0A2G2XGM6_CAPBA) Solyc02g084990.3 4513 4852 1171 4906 5581 4745 4018 5146 3643 5156 917 2386 5223 2334 2715 Mannan endo-1,4-beta-mannosidase (AHRD V3.3 *** A0A2K3NB99_TRIPR) AT5G66460 Solyc02g085000.3 826 529 450 561 421 436 456 449 457 557 528 452 413 465 552 netrin receptor DCC (AHRD V3.3 *** AT3G50910.1) AT3G50910 Solyc02g085005.1 64 18 45 34 4 6 3 2 28 17 62 7 11 29 49 hypothetical protein (AHRD V3.3 *** AT2G18210.1) AT4G36500 Solyc02g085010.1 214 108 195 81 12 13 8 6 64 54 364 80 113 88 166 hypothetical protein (AHRD V3.3 *-* AT2G18210.1) AT4G36500 Solyc02g085020.4 156 723 509 258 291 321 363 404 1675 395 374 1283 1197 774 1060 dihydroflavonol 4-reductase AT5G42800 Solyc02g085030.4 665 932 1674 941 1101 1525 1327 1300 1688 860 1369 1259 1138 1274 1676 Auxilin-like protein 1 (AHRD V3.3 *** A0A2G3D7U8_CAPCH) Solyc02g085040.3 1162 1134 1172 1066 1283 1088 1165 1084 965 984 1063 1030 1142 1088 1359 GAMMA carbonic anhydrase (AHRD V3.3 *** G5DWW7_SILLA) AT1G19580 Solyc02g085050.3 552 679 1493 781 1119 1097 1165 1103 736 1004 1051 941 945 779 852 Soluble inorganic pyrophosphatase (AHRD V3.3 *** A0A2G3D7Y7_CAPCH) Solyc02g085060.2 0 0 0 0 2 0 1 0 2 0 0 0 0 0 0 Replication factor C (AHRD V3.3 *** A0A200Q9E2_9MAGN) Solyc02g085070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** O23227_ARATH) Solyc02g085080.4 296 426 550 805 484 605 681 598 524 605 538 482 358 554 360 alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT3G19970.5) AT2G18245 Solyc02g085090.1 18 16 24 43 41 65 41 67 40 30 64 35 25 31 44 syntaxin-112 (AHRD V3.3 *** A0A2I4FCJ9_9ROSI) AT2G18260 Solyc02g085100.3 217 543 911 678 963 921 926 864 875 544 690 804 490 557 563 Glucose-6-phosphate 1-epimerase (AHRD V3.3 *** A0A2G3AQU6_CAPCH) AT5G66530 Solyc02g085110.4 7 136 87 107 200 173 144 146 82 158 92 79 8 52 181 Laccase (AHRD V3.3 *** K4BB25_SOLLC) Solyc02g085120.3 5 174 42 178 134 188 217 153 109 159 139 53 9 40 230 Laccase (AHRD V3.3 *** K4BB26_SOLLC) AT5G03260 Solyc02g085130.4 221 255 513 341 297 337 339 220 166 230 250 290 248 339 385 Tubby-like F-box protein (AHRD V3.3 *** A0A2G3D7T8_CAPCH) AT2G18280 Solyc02g085140.4 933 607 774 501 365 439 436 379 707 564 908 419 795 688 718 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8FN26_CAPAN) AT4G36550 Solyc02g085145.1 8 107 61 54 31 9 46 18 29 35 26 37 66 43 60 Transcription factor RADIALIS (AHRD V3.3 *** A0A1U8FSL3_CAPAN) Solyc02g085150.4 757 225 200 124 35 26 10 34 189 464 331 168 167 216 398 Late embryogenesis abundant (LEA) protein (AHRD V3.3 *** A0A1P8B7I6_ARATH) AT4G36600 Solyc02g085160.1 825 1223 1244 1456 903 1064 1012 965 1587 1139 1633 1261 1782 1405 1404 Zinc-finger homeodomain protein 6 (AHRD V3.3 *** A0A2G3D7X0_CAPCH) AT1G75240 Solyc02g085165.1 5 39 22 34 28 39 21 26 34 42 34 29 38 30 22 Unknown protein Solyc02g085170.4 632 479 685 578 558 620 566 547 653 573 461 614 689 521 361 Sugar facilitator protein 10 Solyc02g085180.5.1 294 206 91 188 235 183 168 220 200 218 154 147 184 212 177 alpha/beta fold family protein AT4G36610 Solyc02g085190.2 30 147 86 147 263 243 173 409 167 135 69 317 49 133 73 GATA transcription factor 19-like (AHRD V3.3 *** A0A2I4FCM7_9ROSI) AT3G50870 Solyc02g085210.1 824 603 391 399 345 352 292 317 317 292 318 361 535 399 314 Protein-lysine N-methyltransferase rrg1 (AHRD V3.3 *** A0A1J3EN37_NOCCA) AT5G49560 Solyc02g085220.4 76 123 213 187 190 244 317 168 174 96 141 177 148 227 162 Vacuolar sorting protein 39 (AHRD V3.3 *** A0A2U1PI44_ARTAN) AT4G36630 Solyc02g085230.3 448 1034 603 546 580 624 644 658 482 335 471 527 1394 1125 805 U3 small nucleolar RNA-associated protein 22 (AHRD V3.3 *** A0A1Y1I3P1_KLENI) AT1G63810 Solyc02g085240.4 72 87 191 144 166 154 166 104 98 93 166 103 143 130 157 AP complex subunit sigma (AHRD V3.3 *** A0A2G2XGH6_CAPBA) AT3G50860 Solyc02g085250.4 732 782 596 577 835 793 774 1005 612 429 477 608 700 755 611 FAD dependent oxidoreductase (AHRD V3.3 *** A0A200R7L9_9MAGN) AT5G49555 Solyc02g085260.1 0 0 0 4 0 0 0 0 0 1 0 0 0 4 0 Unknown protein Solyc02g085270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8AQV3_ARATH) Solyc02g085280.1 548 534 327 316 306 326 320 342 300 310 330 340 465 410 460 Ribosomal protein L6 (AHRD V3.3 *** A0A200R7R7_9MAGN) AT2G18400 Solyc02g085290.3 132 130 149 165 109 100 124 78 93 102 121 70 107 121 190 Maf-like protein (AHRD V3.3 *** A0A2U1MK08_ARTAN) AT5G66550 Solyc02g085300.4 672 314 431 395 229 240 229 187 363 391 415 310 279 486 590 Unknown protein Solyc02g085320.1 28 29 30 17 13 8 11 15 9 18 3 14 25 26 15 Unknown protein Solyc02g085330.1 3 0 5 2 4 2 2 3 4 0 7 4 0 0 0 late embryogenesis abundant protein (AHRD V3.3 *** AT5G66780.1) AT5G66780 Solyc02g085340.1 1526 1428 993 987 1686 1620 1623 1948 1288 1415 1055 1354 1278 1118 1071 Transcription factor GRAS (AHRD V3.3 *** A0A200Q206_9MAGN) AT5G66770 Solyc02g085350.4 2312 4092 3980 3997 5240 4423 4671 5138 5474 3741 3906 3850 4499 4381 4393 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (AHRD V3.3 *** A0A2G3D7Q7_CAPCH) AT5G66760 Solyc02g085360.4 48 118 44 132 90 91 110 84 67 38 111 28 293 50 103 CYP90B3 mRNA for cytochrome P450 AT3G50660 Solyc02g085370.3 209 137 117 203 168 199 152 157 131 167 157 162 150 127 132 Unknown protein Solyc02g085380.3 4 16 39 21 24 43 52 47 12 23 28 47 9 21 11 Protein LIKE COV 2 (AHRD V3.3 *** A0A2G2ZPX7_CAPAN) AT2G18460 Solyc02g085390.4 214 515 521 392 885 822 886 757 563 351 412 572 358 500 158 ATP-dependent DNA helicase DDM1 (AHRD V3.3 *** A0A1U8FMX5_CAPAN) AT5G66750 Solyc02g085400.3 123 27 148 145 4 3 6 3 43 69 72 20 43 49 29 Sulfite exporter TauE/SafE family protein (AHRD V3.3 *** A0A2U1KY14_ARTAN) Solyc02g085410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g085420.4 15178 11006 8812 7569 6892 7628 7600 7595 9494 7336 7711 7953 10604 10463 10134 U1 small nuclear ribonucleoprotein 70 kDa (AHRD V3.3 *-* A0A2G3AAH2_CAPAN) AT3G50670 Solyc02g085430.4 531 554 524 810 640 465 674 643 351 922 339 618 354 636 415 Proline-rich receptor-like protein kinase PERK7 (AHRD V3.3 *** A0A2G3AAH0_CAPAN) Solyc02g085440.4 55 51 82 23 8 14 18 16 30 37 23 45 62 50 55 Ribosome biogenesis protein BMS1-like protein (AHRD V3.3 *-* A0A2G2W7A2_CAPBA) Solyc02g085450.1 38 24 61 65 55 67 57 26 38 39 82 60 40 36 52 F-box protein At5g07610-like (AHRD V3.3 *** A0A2I4F448_9ROSI) Solyc02g085460.1 102 32 61 77 102 71 76 84 56 93 73 106 57 70 53 Unknown protein Solyc02g085470.3 2498 1457 1062 1435 1139 1122 1165 1327 1213 2219 1327 1526 894 1318 1306 Transcription initiation factor IIB-like protein (AHRD V3.3 *** A0A2K3NHT1_TRIPR) AT4G36650 Solyc02g085480.4 44 192 180 151 197 214 206 227 138 108 170 181 135 128 67 DUF1195 domain-containing protein (AHRD V3.3 *** A0A1Q3BNM7_CEPFO) AT5G65650 Solyc02g085490.2 132 165 219 109 50 88 88 75 40 70 15 112 24 95 43 DUF620 domain-containing protein (AHRD V3.3 *** A0A1Q3DK00_CEPFO) AT5G66740 Solyc02g085500.4 817 557 646 489 178 199 115 194 293 708 447 447 165 334 434 ovate Solyc02g085520.4 300 578 319 339 490 435 403 518 407 374 305 535 492 448 271 Adenylosuccinate synthetase (AHRD V3.3 *** S8CIB7_9LAMI) AT3G57610 Solyc02g085530.3 7 1 0 6 3 7 4 1 1 1 3 9 2 3 1 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *-* A0A2G3AAB2_CAPAN) Solyc02g085540.1 4145 3770 4416 4188 5001 5306 4794 4757 3260 3259 5040 3798 3658 3281 3959 ESSS subunit of NADH:ubiquinone oxidoreductase (Complex I) protein (AHRD V3.3 *** Q8L3S7_ARATH) AT3G57785 Solyc02g085550.3 1 14 0 0 0 0 0 0 0 0 0 0 3 8 0 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3A487_CAPAN) Solyc02g085560.3 659 587 716 461 248 326 371 222 448 347 344 433 663 713 707 DNA-directed RNA polymerase III subunit Rpc5 (AHRD V3.3 *** A0A200Q253_9MAGN) AT5G49530 Solyc02g085570.4 2926 2639 2396 2392 2063 2473 2684 2394 2363 2054 2386 2221 2506 2586 2570 U2 snRNP auxiliary factor large subunit (AHRD V3.3 *** A0A2G2XGE1_CAPBA) AT1G60900 Solyc02g085580.4 2438 1480 2764 1597 925 1023 1039 829 1430 2397 2798 1216 2315 1946 1598 Protein indeterminate-domain 1 (AHRD V3.3 *** A0A2G3D7R8_CAPCH) AT5G66730 Solyc02g085590.4 90 54 122 84 46 55 46 19 122 105 362 88 24 106 424 vicilin-like seed storage protein At2g18540 (AHRD V3.3 *-* A0A2I4F3W3_9ROSI) AT2G18540 Solyc02g085600.1 1339 921 909 950 414 313 344 389 710 722 1061 442 971 803 1085 Scarecrow-like protein 15 (AHRD V3.3 *** A0A2G3AAH7_CAPAN) AT4G36710 Solyc02g085610.4 1308 738 621 668 462 598 568 573 540 751 430 705 835 701 632 LEGBF4G L.esculentum GBF4G-box binding protein AT4G36730 Solyc02g085615.1 232 121 62 83 97 93 72 107 96 139 52 181 138 167 77 Unknown protein Solyc02g085620.3 10 53 61 107 78 88 108 111 87 54 43 140 25 66 43 Protein kinase (AHRD V3.3 *** Q39029_ARATH) AT5G66710 Solyc02g085630.3 3186 1099 459 248 14 14 10 12 396 1858 658 426 202 470 549 Homeobox-leucine zipper protein ATHB-21 (AHRD V3.3 *** A0A1U8FVX0_CAPAN) AT4G36740 Solyc02g085640.4 1345 1168 1184 1314 1040 1175 1304 1090 1384 1251 1104 1064 1704 1424 1245 Xaa-Pro aminopeptidase 1 AT4G36760 Solyc02g085650.4 874 1230 614 688 508 458 401 606 556 670 448 667 1128 940 554 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3A487_CAPAN) AT4G36680 Solyc02g085660.1 0 2 0 0 0 0 0 1 0 0 0 0 5 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4ENI5_9ROSI) AT2G18570 Solyc02g085670.3 926 774 983 970 749 856 944 728 653 653 1009 702 777 910 939 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1P386_ARTAN) AT4G36790 Solyc02g085690.4 105 140 182 177 201 176 225 212 142 89 146 137 197 192 66 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200R7K5_9MAGN) Solyc02g085700.1 180 196 218 165 209 204 250 260 249 178 195 203 137 191 149 geranylgeranyl pyrophosphate synthetase AT4G36810 Solyc02g085710.4 63 74 133 100 112 111 134 90 86 67 93 67 90 86 60 Geranylgeranyl pyrophosphate synthase, chloroplastic (AHRD V3.3 *** A0A2G2XGF3_CAPBA) Solyc02g085720.1 74 96 115 80 108 92 92 86 78 91 59 72 115 85 137 Geranylgeranyl pyrophosphate synthase, chloroplastic (AHRD V3.3 *** A0A2G2XGF3_CAPBA) Solyc02g085725.1 42 19 21 29 29 15 26 13 25 17 30 26 14 34 39 exopolygalacturonase-like (AHRD V3.3 --* XP_025888966.1) Solyc02g085730.3 1521 4409 3904 6181 4210 3482 3545 4790 6357 8925 6702 8622 4903 5512 2001 allene oxide cyclase AT3G25780 Solyc02g085740.4 520 482 418 592 588 563 595 596 525 556 506 510 373 485 457 atherin isoform X1 (AHRD V3.3 *** XP_010232178.1) Solyc02g085750.4 30 223 66 148 505 404 399 485 183 68 85 134 134 88 48 Mental retardation GTPase activating protein (AHRD V3.3 *** A0A1P8BBG8_ARATH) AT5G16030 Solyc02g085760.2 194 162 32 297 40 27 21 12 28 36 1 9 130 169 283 Rhomboid domain-containing protein (AHRD V3.3 *** A0A1Q3C608_CEPFO) AT5G38510 Solyc02g085770.4 38 10 14 59 11 16 24 13 4 18 4 14 2 26 53 AWPM-19-like protein (AHRD V3.3 *-* A0A2U1MYT9_ARTAN) Solyc02g085780.3 1000 1711 1181 1343 1533 1434 1511 1684 1314 924 1025 1282 1912 1861 1413 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** Q0WSJ9_ARATH) AT5G16040 Solyc02g085790.3 1292 2202 1556 1298 1904 1812 1709 2169 1730 1315 1211 1785 2090 1867 1419 T-complex protein 1 subunit zeta (AHRD V3.3 *** A0A2G3D7N6_CAPCH) AT3G02530 Solyc02g085800.2 0 0 0 0 0 0 0 0 18 11 0 0 21 1 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1PVQ0_ARTAN) AT5G16080 Solyc02g085810.3 1903 2285 2139 2285 1915 2417 2774 2366 2510 1762 2145 1883 1933 2587 2889 HEAT repeat-containing protein 5B (AHRD V3.3 *** A0A1J3HBB6_NOCCA) AT1G67140 Solyc02g085820.3 588 769 522 704 730 577 727 653 583 545 542 558 829 846 561 NADPH-dependent diflavin oxidoreductase 1 (AHRD V3.3 *** A0A2G2XH22_CAPBA) AT3G02280 Solyc02g085830.4 54 27 52 41 6 9 13 13 17 20 150 10 29 21 74 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* Q9FX63_ARATH) Solyc02g085840.2 4073 3543 3546 3229 3395 3387 3331 3648 3676 3496 3331 3796 3545 3413 3160 RAD23 homolog Solyc02g085850.1 92 112 97 108 125 99 88 137 123 184 86 156 107 82 103 Alpha-1,3-glucosyltransferase (AHRD V3.3 *-* A0A1U8FN90_CAPAN) Solyc02g085860.4 269 224 224 288 191 297 259 228 175 300 229 272 170 142 272 Alpha-1,3-glucosyltransferase (AHRD V3.3 *** A0A2G2XH31_CAPBA) AT5G38460 Solyc02g085870.3 1920 2229 2183 2417 536 695 415 483 1753 1792 3676 1770 2369 1968 3469 beta-ketoacyl-coenzyme A synthase AT1G68530 Solyc02g085880.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1LMY2_ARTAN) AT5G38450 Solyc02g094860.3 0 1 0 9 0 0 0 0 0 0 0 0 4 0 1 Cytochrome P450 (AHRD V3.3 *** A0A2U1LMY2_ARTAN) AT5G38450 Solyc02g085910.4 15 7 58 16 30 27 10 12 7 11 36 3 19 17 11 LOB domain-containing protein (AHRD V3.3 *** A0A2U1NKN8_ARTAN) AT3G02550 Solyc02g085920.3 2417 996 855 920 598 620 595 490 763 852 942 662 684 899 1134 antigenic heat-stable protein (AHRD V3.3 *** AT1G56420.1) AT1G56420 Solyc02g085930.3 25 38 65 61 64 60 55 52 39 37 78 28 19 55 86 Peroxidase (AHRD V3.3 *** K4BBA2_SOLLC) Solyc02g085933.1 1 0 0 1 6 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc02g085937.1 97 127 257 167 154 143 189 145 114 153 94 137 115 118 123 Complex 1 LYR protein (AHRD V3.3 *** A0A2U1NHM6_ARTAN) AT1G76060 Solyc02g085950.4 11 33 57 14 34 32 36 23 33 8 44 22 19 14 92 cell wall protein X77373 AT5G38430 Solyc02g085940.4 0 3 5 0 0 1 0 0 1 0 0 0 0 0 0 Ribulose bisphosphate carboxylase small chain (AHRD V3.3 *** A0A2G2XBI7_CAPBA) AT5G38430 Solyc02g085960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g085965.1 26 23 39 33 31 41 34 28 44 38 60 29 44 24 25 caffeoylshikimate esterase-like (AHRD V3.3 --* XP_004233711.1) Solyc02g085970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g085980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g085990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g086000.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g086010.3 0 15 61 29 74 62 70 38 33 28 50 42 26 31 36 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1N4U5_ARTAN) Solyc02g086020.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g086030.2 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 Unknown protein Solyc02g086040.2 2 0 1 0 0 0 0 3 0 1 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1N4U5_ARTAN) Solyc02g086050.3 151 262 259 275 478 489 517 436 314 250 263 293 228 248 157 Abscisic acid (Aba)-deficient 4 (AHRD V3.3 *** A0A1P8AQ81_ARATH) AT1G67080 Solyc02g086060.4 88 120 98 155 157 117 166 170 112 120 129 162 164 153 100 Zinc transporter (AHRD V3.3 *** Q8RWM9_ARATH) Solyc02g086070.2 53 57 42 58 47 36 41 64 64 55 77 63 83 57 60 Zinc transporter (AHRD V3.3 *** F4KA71_ARATH) Solyc02g086080.4 226 292 220 276 260 276 347 324 210 215 207 190 247 246 245 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* F4KA67_ARATH) Solyc02g086090.4 1474 603 763 665 388 413 505 376 424 931 735 511 367 645 906 Mannose-6-phosphate isomerase (AHRD V3.3 *-* A0A2G3AAT7_CAPAN) Solyc02g086100.4 727 577 487 399 316 387 393 335 317 305 384 332 519 614 525 Elongator complex protein 5 (AHRD V3.3 *-* A0A2G3D885_CAPCH) Solyc02g086110.3 8 47 31 38 77 73 69 86 25 32 41 83 14 24 35 peptidase M50B-like protein (AHRD V3.3 *** AT1G67060.1),Pfam:PF13398 Solyc02g086120.2 22 5 6 5 6 6 2 1 4 4 3 1 0 5 1 Unknown protein Solyc02g086130.4 1708 1850 2264 2054 2516 2750 2470 2510 2463 2226 2220 2794 1302 1883 1720 Zinc finger A20 and AN1 domain-containing stress-associated protein 8 (AHRD V3.3 *-* A0A2G3ATY0_CAPCH) AT1G67040 Solyc02g086140.2 18 141 81 162 266 312 302 343 145 89 132 160 21 111 107 homeobox Hox-B3-like protein (AHRD V3.3 *** AT1G67035.2) AT1G67035 Solyc02g086150.4 520 459 520 442 578 669 578 484 406 407 461 424 360 526 487 Peptidyl-tRNA hydrolase (AHRD V3.3 *** A0A2U1PP71_ARTAN) AT5G16140 Solyc02g086160.4 1155 1528 1261 1329 2353 2478 2734 2382 1435 1392 1138 1361 1295 1304 1687 plastidic glucose translocator 1 AT5G16150 Solyc02g086170.3 61 33 38 38 43 38 48 41 57 65 46 58 44 60 65 hypothetical protein (AHRD V3.3 *** AT5G16160.1) AT5G16160 Solyc02g086180.4 575 3389 2141 4323 2786 2650 2543 2590 9297 9796 12683 12985 2406 3013 5568 Delta(7)-sterol-C5(6)-desaturase (AHRD V3.3 *-* A0A1U8FPX0_CAPAN) Solyc02g086190.3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Delta(7)-sterol-C5(6)-desaturase (AHRD V3.3 *** A0A1U8FPX0_CAPAN) Solyc02g086200.3 137 163 228 273 274 243 286 292 305 180 181 247 192 248 345 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A2G2XGQ7_CAPBA) AT5G16180 Solyc02g086210.4 832 379 811 325 76 94 74 52 221 594 904 143 431 370 215 Protein kinase family protein (AHRD V3.3 *-* A0A2U1MH78_ARTAN) Solyc02g086215.1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 Unknown protein Solyc02g086220.3 1048 841 680 680 641 711 670 696 720 724 782 683 545 515 815 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9FF34_ARATH) AT5G38220 Solyc02g086223.1 73 53 186 135 96 136 128 75 56 60 171 87 68 106 130 Unknown protein Solyc02g086227.1 51 14 37 28 29 39 54 35 16 25 45 16 37 52 50 Unknown protein Solyc02g086230.2 44 26 41 31 38 75 50 42 29 27 20 23 30 40 25 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1P3Q8_ARTAN) AT5G46680 Solyc02g086240.3 2505 4214 4359 3100 3393 3732 3846 3635 2634 2642 3249 3041 5399 4708 4273 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) AT3G58700 Solyc02g086250.4 95 176 176 210 278 254 279 262 192 131 151 250 150 183 126 titan9 (AHRD V3.3 *** AT3G20070.4) AT3G20070 Solyc02g086260.1 384 332 381 256 585 473 420 360 349 250 463 365 429 285 470 50S ribosomal-like protein (AHRD V3.3 *** Q9C618_ARATH) AT1G66890 Solyc02g086270.4 111 166 146 243 131 168 194 201 154 147 172 102 182 196 203 Protein kinase family protein (AHRD V3.3 *** A0A2U1MH78_ARTAN) AT1G66880 Solyc02g086290.2 0 0 1 0 0 1 0 3 2 0 5 0 3 4 0 Protein kinase, catalytic domain-containing protein (AHRD V3.3 *-* A0A2U1PLE6_ARTAN) AT1G66940 Solyc02g086300.4 11 7 20 5 37 25 22 21 5 17 84 10 15 11 58 Class I glutamine amidotransferase-like superfamily protein (AHRD V3.3 *** A0A2U1KIC9_ARTAN) Solyc02g086310.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 lipid-transfer protein 7k-LTP precursor (AHRD V3.3 --* NP_001306883.1) Solyc02g086320.1 159 136 260 252 181 263 268 147 252 174 328 167 165 189 431 HEAT repeat-containing protein-like (AHRD V3.3 *-* Q5QMW8_ORYSJ) Solyc02g086330.4 326 465 420 510 470 511 527 572 606 576 426 519 391 489 508 HEAT repeat-containing protein-like (AHRD V3.3 *** Q5QMW8_ORYSJ) AT5G16210 Solyc02g086350.3 207 242 98 187 312 254 239 251 322 139 123 126 165 93 116 Protein PLASTID MOVEMENT IMPAIRED 2 (AHRD V3.3 *** A0A1J3GMT9_NOCCA) AT1G66840 Solyc02g086360.3 1293 1065 845 663 679 984 937 696 522 731 1037 605 597 696 612 Octicosapeptide/Phox/Bem1p family protein (AHRD V3.3 *-* A0A2K3L5A6_TRIPR) Solyc02g086370.4 94 220 227 284 286 370 374 279 217 153 397 255 133 207 585 Lipid phosphate phosphatase (AHRD V3.3 *** A0A2R6PA01_ACTCH) AT3G02600 Solyc02g086380.1 95 170 220 106 148 150 134 132 155 109 217 162 198 153 100 keratin, type II cytoskeletal I (AHRD V3.3 *** XP_004232330.1) Solyc02g086390.1 1 12 31 1 4 5 1 4 5 5 0 0 4 9 0 Unknown protein Solyc02g086400.3 4 4 1 4 0 0 0 4 1 1 0 4 0 0 0 Unknown protein Solyc02g086410.3 13 5 27 14 12 15 8 12 1 10 27 10 5 6 20 CTP synthase (AHRD V3.3 *-* A0A328EA92_9ASTE) Solyc02g086415.1 8 1 0 1 0 6 2 0 0 0 0 0 0 2 0 MUTL protein homolog 3 (AHRD V3.3 --* AT4G35520.5) Solyc02g086430.4 0 12 6 4 7 13 2 7 7 8 6 9 2 8 9 Zinc finger transcription factor 21 Solyc02g086440.4 394 252 78 237 240 168 243 173 132 282 106 200 181 159 102 F-box/LRR-repeat protein 3 (AHRD V3.3 *-* A0A2I4HUQ7_9ROSI) Solyc02g150140.1 405 143 162 225 48 142 102 96 95 116 95 95 121 142 140 Unknown protein Solyc02g086450.1 184 296 216 137 544 316 375 367 226 170 141 290 139 159 55 Cyclin-dependent protein kinase inhibitor SMR6 (AHRD V3.3 *** SMR6_ARATH) AT5G40460 Solyc02g086451.1 22 10 13 20 9 4 0 0 5 2 13 0 28 15 25 Unknown protein Solyc02g086452.1 11 8 14 26 0 0 3 1 8 12 3 0 1 9 29 titin isoform X3 (AHRD V3.3 *-* XP_004232326.1) Solyc02g086454.1 7 9 2 32 5 7 2 1 10 8 11 10 6 11 67 titin isoform X6 (AHRD V3.3 *-* XP_010316304.1) Solyc02g086456.1 0 1 0 3 0 0 0 0 0 2 12 0 1 0 1 titin isoform X6 (AHRD V3.3 *-* XP_010316304.1) Solyc02g086458.1 210 138 123 771 31 41 35 26 97 102 96 14 91 128 577 titin isoform X2 (AHRD V3.3 *-* XP_010316302.1) Solyc02g086470.3 67 444 422 373 544 527 604 468 358 243 361 551 209 529 188 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1M8S4_ARTAN) AT3G27640 Solyc02g086480.1 49 28 35 251 100 101 67 27 53 71 33 30 45 54 168 LOB domain-containing protein (AHRD V3.3 *** A0A2U1M8Q7_ARTAN) AT3G27650 Solyc02g086490.3 8 14 30 57 18 29 33 27 10 27 7 14 20 7 14 Oleosin (AHRD V3.3 *** A0A1U8FYV0_CAPAN) AT3G01570 Solyc02g086500.3 728 862 962 1061 985 1239 1257 1108 1074 766 611 1025 891 1142 1070 Protein RST1 (AHRD V3.3 *** A0A1J3F2P9_NOCCA) AT3G27670 Solyc02g086510.4 1360 1440 1204 1179 1113 1136 1091 1229 1294 1074 1098 1076 1565 1704 1285 Zinc finger transcription factor 22 AT3G27700 Solyc02g086520.3 2020 1929 1614 3938 2194 1776 2770 3398 2182 4364 2229 2913 2459 2111 1246 Proline-rich receptor-like kinase, putative (DUF1421) (AHRD V3.3 *-* F4J3J5_ARATH) AT5G14540 Solyc02g086530.4 180 82 182 85 8 8 4 5 100 40 117 33 77 306 842 Raffinose synthase (AHRD V3.3 *** G5DF09_9LAMI) AT5G40390 Solyc02g086540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sister chromatid cohesion 1 protein 4 (AHRD V3.3 *-* A0A2G3DGK5_CAPCH) Solyc02g086550.3 807 531 550 538 447 354 390 355 436 590 532 377 617 578 596 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *-* A0A2K3MVY8_TRIPR) AT5G14550 Solyc02g086560.3 349 326 377 435 366 413 444 342 274 302 342 258 264 282 410 Sirohydrochlorin ferrochelatase-like protein (AHRD V3.3 *** A0A2K3MSH4_TRIPR) AT1G50170 Solyc02g086565.1 5 0 2 1 0 0 1 0 0 5 1 0 0 0 4 Unknown protein Solyc02g086570.3 28 36 21 37 22 20 42 15 22 17 24 23 49 33 12 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RAX6_9MAGN) Solyc02g086580.4 77 36 29 41 19 16 19 18 36 5 25 16 24 60 65 ATP-dependent DNA helicase MER3-like protein (AHRD V3.3 *** A0A2G3D990_CAPCH) AT3G27730 Solyc02g150141.1 20 18 6 7 2 4 3 0 6 6 15 8 19 17 30 Cytochrome c oxidase subunit 5C (AHRD V3.3 *** A0A2G3ABW9_CAPAN) AT2G47380 Solyc02g086590.3 418 267 408 209 111 75 63 69 190 379 533 112 500 209 259 Cysteine-rich receptor-like protein kinase 42 (AHRD V3.3 *** A0A2G2XIU5_CAPBA) AT5G40380 Solyc02g086600.3 516 706 581 382 286 285 408 335 378 197 381 315 644 823 537 Polyribonucleotide nucleotidyltransferase (AHRD V3.3 *** A0A2U1PID0_ARTAN) AT5G14580 Solyc02g086610.4 732 967 920 848 874 766 934 939 776 698 670 668 1023 1224 910 Isocitrate dehydrogenase [NADP] (AHRD V3.3 *** A0A2G3AC10_CAPAN) Solyc02g086620.3 15 15 53 55 29 70 51 41 22 21 40 30 21 49 6 sister chromatid cohesion protein PDS5 homolog B-like isoform X1 (AHRD V3.3 *-* XP_019068668.1) Solyc02g086630.3 52 55 9 37 57 35 26 47 40 37 39 29 40 54 27 Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *-* A0A2K3PKD0_TRIPR) Solyc02g086640.4 366 514 374 348 419 423 494 493 340 420 338 303 543 568 304 Unknown protein Solyc02g086650.3 183 1074 951 1047 1794 1921 1947 1661 1641 1884 1705 2240 840 793 447 Phosphoenolpyruvate/phosphate translocator 2, chloroplastic (AHRD V3.3 *** A0A2G2XHT3_CAPBA) AT3G01550 Solyc02g086660.4 1473 1195 1535 1193 1027 1125 1148 1175 1182 1384 1147 1286 1152 1369 1245 RNA helicase DEAD10 AT3G01540 Solyc02g086670.4 6534 4392 3633 4629 6358 6603 6068 7102 3895 6403 3781 6152 4005 3224 2746 Shaggy-related protein kinase gamma (AHRD V3.3 *** A0A2G3D9D8_CAPCH) Solyc02g086680.4 248 388 223 248 390 355 305 281 280 269 260 222 323 328 286 peptide deformylase AF250958 AT5G14660 Solyc02g086690.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB transcription factor (AHRD V3.3 *** H6B4C0_CROSA) Solyc02g086700.4 5 11 0 13 0 0 0 1 2 2 0 5 21 44 10 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A2G3D9H7_CAPCH) Solyc02g086710.3 660 634 471 605 546 574 610 618 677 681 713 617 643 630 681 Monodehydroascorbate reductase (AHRD V3.3 *** A0A2G3AC00_CAPAN) AT3G27820 Solyc02g086730.3 1259 1943 1342 2525 1834 1502 2619 2270 1646 2592 1558 2012 1753 2937 1166 Ribosomal protein L7/L12 (AHRD V3.3 *** A0A200R2P7_9MAGN) AT3G27850 Solyc02g086740.1 133 666 388 1202 795 705 1045 874 550 826 388 576 325 954 251 50S ribosomal protein L12, chloroplastic (AHRD V3.3 *** A0A2G3D9E1_CAPCH) AT3G27850 Solyc02g086750.3 1743 1361 1267 1272 1181 1592 1563 1291 1266 934 1072 1340 1037 1318 1558 Tudor/PWWP/MBT superfamily protein (AHRD V3.3 *-* A0A1P8BF80_ARATH) AT5G40340 Solyc02g086760.1 9 26 4 40 11 9 6 7 8 8 17 3 11 20 38 transmembrane protein (AHRD V3.3 *** AT3G01516.2) AT3G01516 Solyc02g086770.3 27 41 59 38 45 34 51 37 65 16 30 48 78 42 54 Cinnamoyl-CoA reductase (AHRD V3.3 *** A0A172WBP6_DAUCA) AT5G14700 Solyc02g086780.4 125 194 193 163 164 200 224 193 133 92 172 124 260 215 240 Proteasome assembly chaperone 3 (AHRD V3.3 *** A0A2U1N178_ARTAN) AT5G14710 Solyc02g086790.4 1357 1673 1587 1553 1782 1764 1932 1870 1798 1461 1574 1613 1905 1756 1475 Protein kinase (AHRD V3.3 *** A7L4B0_CARPA) AT5G14720 Solyc02g086800.4 1015 745 852 704 510 543 574 546 790 794 589 652 724 785 753 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A1U8FQP5_CAPAN) Solyc02g086810.1 238 201 339 225 226 203 176 141 246 237 302 218 374 303 363 Nipped-B-like protein (AHRD V3.3 *** A0A2R6RYV7_ACTCH) AT3G27880 Solyc02g086820.3 200 317 613 259 31 29 19 23 129 174 87 33 154 25 225 chloroplast carbonic anhydrase AT3G01500 Solyc02g086830.3 545 474 411 447 585 490 538 601 523 767 371 556 402 342 271 Protease Do-like chloroplastic-like (AHRD V3.3 *** A0A2K3P0Q7_TRIPR) AT3G27925 Solyc02g086840.3 60 51 92 46 7 25 12 8 23 95 63 56 5 44 26 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1LHI7_ARTAN) AT3G27960 Solyc02g086850.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Exonuclease family protein (AHRD V3.3 *** A0A2U1PL29_ARTAN) Solyc02g086860.4 358 265 225 265 177 242 263 347 270 294 225 258 314 290 346 CASP-like protein (AHRD V3.3 *** A0A2I4FB41_9ROSI) Solyc02g086870.4 863 759 684 662 616 642 585 528 536 556 680 643 629 580 781 farnesyl protein transferase subunit B AT5G40280 Solyc02g086880.4 3059 3291 4901 4990 2759 2749 3010 2699 22274 8939 8587 7606 4858 5874 8190 formate dehydrogenase AT5G14780 Solyc02g086890.3 341 568 452 623 587 768 756 588 438 373 540 413 452 426 798 Calcium homeostasis regulator CHoR1 (AHRD V3.3 *** Q5QTN8_SOLTU) AT3G55250 Solyc02g086900.4 926 746 926 782 710 722 711 656 625 669 526 593 823 879 910 HD domain-containing metal-dependent phosphohydrolase family protein (AHRD V3.3 *** A0A2U1PYT8_ARTAN) AT5G40270 Solyc02g086910.4 636 772 735 812 884 839 1028 1041 854 818 795 723 491 561 614 Peptidyl-prolyl cis-trans isomerase protein (AHRD V3.3 *** A0A2U1LHJ7_ARTAN) AT3G01480 Solyc02g086920.2 0 0 0 0 0 1 0 0 1 0 0 0 2 0 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVG5_SOLTU) Solyc02g086930.4 3582 1885 2356 2919 897 1267 1253 1004 2351 2056 2710 1125 1413 2232 4161 Homeobox-leucine zipper protein HAT5 (AHRD V3.3 *** A0A2G2XIE8_CAPBA) AT3G01470 Solyc02g086940.3 280 829 631 820 903 1009 1087 984 859 534 931 993 515 619 593 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1PMP5_ARTAN) AT5G14790 Solyc02g086950.1 0 1 3 6 2 2 0 5 1 0 0 0 1 0 5 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1N3Q0_ARTAN) Solyc02g086960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine-threonine protein kinase, plant-type, putative (AHRD V3.3 *** B9RUB2_RICCO) Solyc02g086970.4 1600 782 682 887 661 847 764 714 537 532 679 424 596 728 908 Aldehyde dehydrogenase (AHRD V3.3 *** A0A2U1MUY7_ARTAN) Solyc02g086980.3 68 79 110 122 116 93 119 65 120 47 100 63 149 144 202 Unknown protein Solyc02g086990.4 33 37 24 38 10 42 18 43 36 26 10 27 15 58 9 Cyclic nucleotide-gated ion channel-like protein (AHRD V3.3 *** A0A2K3MW13_TRIPR) Solyc02g087000.4 640 498 383 783 363 424 360 395 431 407 405 381 599 557 527 Potassium transporter (AHRD V3.3 *** A0A2G3AC18_CAPAN) Solyc02g087010.2 832 769 871 810 552 498 497 361 543 642 908 418 735 831 765 NHL domain-containing protein (AHRD V3.3 *** A0A1Q3BXC8_CEPFO) Solyc02g087020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g087030.1 42 76 82 91 78 83 81 75 64 41 107 30 44 62 69 NHL domain protein (AHRD V3.3 *** A0A1P8BDM5_ARATH) AT3G01430 Solyc02g087040.1 122 179 298 302 224 275 279 233 238 130 367 246 122 279 244 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1N3Q0_ARTAN) AT5G40250 Solyc02g087050.2 134 242 394 360 402 350 317 346 378 260 361 353 229 308 239 WAT1-related protein (AHRD V3.3 *** K4BBL2_SOLLC) Solyc02g087060.4 1647 736 689 1259 267 217 205 196 529 1034 809 386 521 635 1521 WAT1-related protein (AHRD V3.3 *** K4BBL3_SOLLC) AT3G28050 Solyc02g087070.4 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 alpha-DOX1 Solyc02g087090.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 alpha-DOX2 Solyc02g087100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha-dioxygenase (AHRD V3.3 *-* Q5GQ66_PEA) Solyc02g087110.3 32 21 2 0 0 1 1 0 0 1 0 2 0 0 10 Alpha-dioxygenase (AHRD V3.3 *** Q5GQ66_PEA) AT3G01420 Solyc02g087120.4 67 185 235 163 302 386 307 430 127 133 186 298 80 221 74 Protein ALTERED XYLOGLUCAN 4-like (AHRD V3.3 *-* A0A2G3D9F7_CAPCH) Solyc02g087130.4 1369 1045 1293 1008 1170 1070 979 1272 1066 1513 1118 1297 1011 961 976 Ribonuclease H (AHRD V3.3 *** A0A2U1P3J3_ARTAN) AT3G01410 Solyc02g087140.3 525 425 392 402 436 404 420 408 474 547 393 525 410 379 340 Ribonuclease H (AHRD V3.3 *** A0A2U1P3J3_ARTAN) AT3G01410 Solyc02g087150.3 864 975 1347 1280 1285 1271 1213 1337 994 1024 1007 1151 605 902 1110 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* AT5G14910.2) AT5G14910 Solyc02g087160.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g087170.4 1173 1233 968 1060 827 992 1024 1081 961 898 743 1113 1096 1139 932 GPI ethanolamine phosphate transferase 1 (AHRD V3.3 *** A0A2I4EUP4_9ROSI) AT3G01380 Solyc02g087180.4 1841 1762 1584 1819 1831 1511 1598 1896 1223 2382 1590 1868 1173 1444 986 Mediator of RNA polymerase II transcription subunit 4 (AHRD V3.3 *** A0A2G2XIE7_CAPBA) AT5G02850 Solyc02g087190.1 572 1583 2454 1530 1803 1497 1353 1469 1561 1376 2002 1339 1235 1156 1406 Peroxidase (AHRD V3.3 *** K4BBM6_SOLLC) AT5G40150 Solyc02g087200.2 493 648 818 873 531 512 614 658 619 830 709 664 677 566 588 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2XIC9_CAPBA) AT5G40140 Solyc02g087210.3 338 389 3602 241 57 103 78 66 172 628 3560 381 381 274 935 Zinc finger AN1 domain-containing stress-associated protein 12 (AHRD V3.3 *** A0A2G2XID2_CAPBA) AT3G28210 Solyc02g087220.4 374 322 407 328 432 383 400 372 359 304 342 371 375 371 491 HhH-GPD domain (AHRD V3.3 *-* A0A200R0K8_9MAGN) Solyc02g087230.3 1483 957 1428 1216 711 814 727 761 1226 1208 1312 1109 1023 1036 1297 Ferredoxin-thioredoxin reductase, catalytic chain (AHRD V3.3 *** A0A2G3D9G9_CAPCH) AT2G04700 Solyc02g087240.4 1607 3183 2520 2675 3271 3065 2835 3917 4150 2599 2162 3389 3166 3178 2743 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (AHRD V3.3 *** A0A2G3D9C7_CAPCH) AT5G08530 Solyc02g087250.4 1167 1281 1233 1151 1190 1093 1239 1197 1230 1090 1221 1023 1101 1317 1178 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A1J3K6T8_NOCCA) AT3G01370 Solyc02g087260.1 191 174 140 170 189 160 174 169 146 236 221 191 197 137 202 DUF716 domain-containing protein (AHRD V3.3 *** A0A1Q3C3N0_CEPFO) AT3G01360 Solyc02g087270.2 43 18 31 33 14 18 34 5 24 26 44 33 35 38 46 F-box domain (AHRD V3.3 *-* A0A200RDS2_9MAGN) Solyc02g087280.3 262 135 107 254 76 75 99 67 111 63 104 56 89 86 67 Protein NRT1/ PTR FAMILY 5.9 (AHRD V3.3 *** A0A2G3D9C8_CAPCH) AT5G14940 Solyc02g087290.3 3080 2306 1924 1685 1929 2006 2091 2105 2173 2720 1899 2333 1779 2220 2045 Alpha-mannosidase (AHRD V3.3 *** A0A2G2XIC1_CAPBA) AT5G14950 Solyc02g087300.1 822 1725 1528 1234 1694 1745 1559 1849 1494 1262 1173 1381 1542 1582 1339 WD40 repeat (AHRD V3.3 *** A0A200QV31_9MAGN) AT2G30050 Solyc02g087310.3 198 380 432 446 602 584 715 460 329 241 465 528 377 521 387 E2F transcription factor-like E2FE (AHRD V3.3 *** A0A2G2VFD9_CAPBA) Solyc02g087320.2 1 2 5 1 4 8 13 2 4 2 0 6 1 9 4 Unknown protein Solyc02g087330.3 98 291 357 370 303 341 395 233 250 184 433 199 367 416 271 B12D protein (AHRD V3.3 *** Q9XHD5_IPOBA) AT3G48140 Solyc02g087340.3 5432 3070 2154 3230 2295 1669 1677 1951 1932 3680 2698 2296 2172 2887 3956 Seed maturation-like protein (AHRD V3.3 *** Q8LGA2_ARATH) AT5G14970 Solyc02g087350.3 427 174 181 77 1 5 4 1 2 14 473 135 77 112 219 Hexosyltransferase (AHRD V3.3 *** A0A2G2XIE5_CAPBA) AT3G28340 Solyc02g087360.4 1514 1309 1186 1207 978 1029 1199 1056 1313 990 1089 987 1078 1555 1291 Paired amphipathic helix protein Sin3-like 1 (AHRD V3.3 *** A0A1U8G0F5_CAPAN) AT5G15020 Solyc02g087365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *** A0A2G3D9H4_CAPCH) AT1G24230 Solyc02g087370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 1 (AHRD V3.3 *-* A0A1U8G0F5_CAPAN) AT1G24200 Solyc02g087373.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *** A0A2G3D9H4_CAPCH) AT1G24230 Solyc02g087377.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *** A0A2G3D9H4_CAPCH) AT1G24230 Solyc02g087380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 1 (AHRD V3.3 *-* A0A1U8G0F5_CAPAN) AT1G24200 Solyc02g087390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *** A0A2G3D9H4_CAPCH) AT1G24230 Solyc02g087400.1 586 754 526 665 1028 1012 1129 986 729 642 670 860 399 656 675 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1KW09_ARTAN) AT2G47450 Solyc02g087410.4 25 102 124 45 22 36 43 17 58 29 79 49 184 80 56 ABC transporter B family member 18 (AHRD V3.3 *** A0A1U8FQF4_CAPAN) AT3G28345 Solyc02g087420.3 4 9 18 10 49 21 19 27 30 7 29 36 8 13 3 spindle assembly checkpoint component (AHRD V3.3 *** AT3G28370.4) AT3G28370 Solyc02g087430.4 679 286 300 373 90 103 93 84 237 442 320 164 268 173 379 inositol-1,4,5-triphosphate-5-phosphatase 4 Solyc02g087440.4 79 126 243 229 83 146 112 109 169 90 197 194 83 224 153 DUF761 domain-containing protein (AHRD V3.3 *** A0A1Q3BYY0_CEPFO) AT3G28420 Solyc02g087450.3 19 111 346 153 280 229 212 228 141 117 221 191 67 125 116 hypothetical protein (AHRD V3.3 *-* AT1G19010.1) Solyc02g087460.1 959 765 812 652 747 643 593 807 831 1179 783 964 795 670 544 Inactive receptor kinase (AHRD V3.3 *** A0A2R6P9E5_ACTCH) AT3G28450 Solyc02g087470.4 6 8 27 29 0 4 5 0 5 1 34 3 30 38 79 CLAVATA3/ESR-RELATED 26 (AHRD V3.3 --* AT1G69970.2) Solyc02g087475.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc02g087480.4 502 919 997 964 727 747 700 834 888 847 631 873 823 876 633 Protein ENHANCED DISEASE RESISTANCE 2 (AHRD V3.3 *** A0A1J3E5Z2_NOCCA) Solyc02g087485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g087490.3 0 0 0 3 0 0 0 2 2 0 0 0 0 5 0 Oxoglutarate/iron-dependent oxygenase (AHRD V3.3 *** A0A2U1MYZ7_ARTAN) AT3G28480 Solyc02g087500.3 0 0 0 0 6 0 0 0 0 1 1 0 0 0 0 Glycerol-3-phosphate acyltransferase (AHRD V3.3 *** A0A0M4FCN7_9SOLA) Solyc02g087510.3 95 155 274 213 196 252 204 234 194 157 238 331 189 181 174 Protein kinase G11A (AHRD V3.3 *** A0A1U8FQE1_CAPAN) AT5G40030 Solyc02g087520.3 27 21 44 66 34 40 49 30 26 11 89 17 4 13 89 Thaumatin (AHRD V3.3 *** A0A200QSK7_9MAGN) AT5G40020 Solyc02g087530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1QF48_ARTAN) Solyc02g087540.3 0 2 0 0 0 0 0 0 1 0 3 0 1 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1I9LN06_ARATH) AT3G28510 Solyc02g087550.3 1285 1287 1220 1399 1332 1346 1339 1411 1321 1568 1083 1374 1370 1365 1124 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) AT5G15050 Solyc02g087560.1 206 302 308 340 258 299 291 308 320 324 267 331 269 325 240 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QC49_9MAGN) AT5G39980 Solyc02g087570.1 0 0 2 6 1 7 3 2 1 3 24 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1L5V5_ARTAN) Solyc02g087580.3 195 225 386 218 130 173 159 150 259 346 380 245 328 234 146 Actin cross-linking (AHRD V3.3 *** A0A2U1P1I6_ARTAN) Solyc02g087590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MAP kinase kinase kinase 19 Solyc02g087600.3 762 422 436 473 457 389 390 356 373 434 332 421 407 439 533 DTW domain protein (AHRD V3.3 *** A0A2K3N2G3_TRIPR) AT2G41750 Solyc02g087610.1 119 183 227 172 161 204 217 201 122 119 102 212 243 245 89 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QFA4_9MAGN) AT3G28640 Solyc02g087620.3 1213 1173 1112 1027 1077 1128 1182 1272 1073 996 891 1186 1078 1324 1330 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase (AHRD V3.3 *** A0A2G3ACA5_CAPAN) AT5G15070 Solyc02g087630.3 889 1026 1543 1336 1519 1441 1577 1291 1046 1126 1478 1168 1304 1305 1400 Thioredoxin (AHRD V3.3 *** A0A2I4EUF7_9ROSI) AT5G39950 Solyc02g087640.3 376 560 469 602 574 570 599 729 544 466 388 665 486 698 501 Protein arginine methyltransferase NDUFAF7 (AHRD V3.3 *** A0A1U8G0E0_CAPAN) AT3G28700 Solyc02g087650.4 82 150 167 149 188 175 176 149 173 101 138 148 211 171 215 homeobox prospero protein (AHRD V3.3 *** AT5G58920.1) AT5G58920 Solyc02g087660.4 3 10 34 30 18 31 12 10 8 19 34 6 12 8 13 SlPIN8 AT5G15100 Solyc02g150142.1 0 0 0 0 0 0 0 0 4 1 0 0 0 0 4 Unknown protein Solyc02g087670.3 1 32 39 20 97 93 97 70 11 6 13 20 10 8 3 Pectate lyase (AHRD V3.3 *** A0A2G2XHV6_CAPBA) AT3G01270 Solyc02g087680.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 FACT complex subunit SSRP1 (AHRD V3.3 *-* A0A1U8FYB7_CAPAN) Solyc02g087690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FACT complex subunit SSRP1 (AHRD V3.3 --* XP_004232241.1) Solyc02g087710.3 5094 5148 4341 3687 4047 4101 3980 4526 4422 4063 3357 4332 5947 5563 3954 FACT complex subunit SSRP1 (AHRD V3.3 *** A0A1U8FYB7_CAPAN) AT3G28730 Solyc02g087720.1 776 1099 672 1025 1152 1048 923 1303 829 1574 729 1244 888 879 556 Transmembrane protein (AHRD V3.3 *** Q9LHA3_ARATH) AT3G28720 Solyc02g087730.3 1391 824 958 955 752 764 835 655 575 613 943 658 887 892 1155 F-box domain, cyclin-like protein (AHRD V3.3 *** A0A2U1KDV5_ARTAN) Solyc02g087740.3 1110 506 1536 508 697 735 716 820 591 977 1579 704 669 818 749 Plant cysteine oxidase 2 (AHRD V3.3 *** A0A2G3AC71_CAPAN) AT5G39890 Solyc02g087750.3 951 880 1064 975 958 895 1080 1140 1017 1194 1096 1004 912 886 860 Ubiquitin-conjugating enzyme (AHRD V3.3 *** Q5ZFS2_PLAMJ) AT2G02760 Solyc02g087760.3 3760 3781 3413 3031 3838 3650 3506 3909 4386 3696 3776 3913 3236 3295 3538 SUN-like protein 7 AT1G74690 Solyc02g087770.3 1665 3105 2577 2858 3046 2572 3060 3514 4161 4176 5023 5104 2041 2490 1666 Aldose 1-epimerase (AHRD V3.3 *** A0A1U8G0C5_CAPAN) Solyc02g087780.3 1069 1587 687 1177 2452 2474 2276 2333 1556 2071 1217 2016 1044 932 1040 Aldose 1-epimerase (AHRD V3.3 *** A0A2G3D9R9_CAPCH) Solyc02g087790.2 4 4 4 2 7 21 11 17 3 0 3 2 10 5 31 Aldose 1-epimerase (AHRD V3.3 *** A0A2G2XHU8_CAPBA) Solyc02g087800.3 130 401 387 366 392 368 491 531 422 243 304 455 463 447 324 Aldose 1-epimerase (AHRD V3.3 *** A0A1U8FRP0_CAPAN) Solyc02g087810.3 126 97 122 102 69 75 101 22 67 55 212 98 86 154 173 Aldose 1-epimerase (AHRD V3.3 *** A0A2G3D9T3_CAPCH) Solyc02g087820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldose 1-epimerase (AHRD V3.3 *** O48971_TOBAC) Solyc02g087830.4 0 12 1 7 4 6 21 7 7 0 1 1 6 5 0 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3MR64_TRIPR) Solyc02g087840.3 41 218 70 169 366 254 287 243 137 12 76 49 99 110 74 Leucine zipper, homeobox-associated, Homeodomain-like protein (AHRD V3.3 *** A0A2U1PPL6_ARTAN) AT5G15150 Solyc02g087850.1 435 269 221 183 83 94 112 123 217 122 565 191 319 253 436 Glutaredoxin (AHRD V3.3 *** A0A200QSA1_9MAGN) AT3G28850 Solyc02g087860.3 7 50 12 36 38 52 23 24 16 13 47 47 9 32 47 Transcription factor PRE5 (AHRD V3.3 *** A0A1U8FQB1_CAPAN) AT5G39860 Solyc02g087870.3 1252 5679 5333 5164 12360 12862 12926 15640 9376 3549 4496 11478 3447 6945 2785 ABC transporter (AHRD V3.3 *** A0A200QEZ6_9MAGN) AT3G28860 Solyc02g087880.3 501 5864 4434 6516 11454 10662 8805 14647 5529 3927 3782 9356 953 3143 1503 Tubulin alpha chain (AHRD V3.3 *** A0A1U8FRN4_CAPAN) AT4G14960 Solyc02g087890.4 266 53 9 26 24 16 6 11 19 39 10 7 14 36 46 Unknown protein Solyc02g087900.3 1166 1306 1271 1219 1483 1402 1458 1444 1613 1041 1225 1299 1461 1537 1242 Cullin (AHRD V3.3 *** A0A2U1PKA1_ARTAN) AT1G26830 Solyc02g087910.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** K4BBU7_SOLLC) AT4G33355 Solyc02g087920.3 69 15 4 8 0 2 2 7 6 14 0 3 0 14 18 NAC domain (AHRD V3.3 *** A0A200QEZ5_9MAGN) AT1G26870 Solyc02g087930.3 8620 5432 7432 5306 4946 5226 5198 4161 4391 3553 6417 4112 7428 6732 8585 60S ribosomal protein L34 (AHRD V3.3 *** A0A1U8GY55_CAPAN) AT1G26880 Solyc02g087940.4 377 415 481 417 490 433 436 394 388 336 418 333 399 441 599 coiled-coil protein (AHRD V3.3 *-* AT1G20770.1) Solyc02g087950.3 163 246 437 332 133 150 103 121 303 294 414 145 260 239 277 DUF1666 domain-containing protein (AHRD V3.3 *** A0A1Q3AQV7_CEPFO) AT5G39785 Solyc02g087960.3 62 156 450 307 139 190 131 132 184 153 224 211 94 130 110 R2R3MYB transcription factor 94 Solyc02g087970.1 0 0 0 0 0 4 0 0 0 1 0 0 0 0 0 Mini zinc finger protein (AHRD V3.3 *** A0ZXL1_SOLLC) Solyc02g087975.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g087980.3 656 1398 1576 1595 2548 2544 2552 2856 1743 1457 1416 2264 560 1388 758 Structural maintenance of chromosomes protein (AHRD V3.3 *** A0A2G3ACB4_CAPAN) AT5G48600 Solyc02g087990.4 28 8 12 2 0 0 1 0 3 9 0 1 16 6 3 Ribosomal protein L34Ae (AHRD V3.3 *-* A0A2U1NXY4_ARTAN) AT3G01175 Solyc02g088000.3 752 1006 771 928 732 829 740 816 1332 1448 1277 1263 1076 1022 710 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** K4BBV6_SOLLC) AT3G01180 Solyc02g088010.3 356 290 383 338 235 272 249 221 261 280 349 251 284 335 426 Defective in cullin neddylation protein (AHRD V3.3 *** A0A2G3ACF2_CAPAN) AT3G28970 Solyc02g088020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g088030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* Q9LJE9_ARATH) Solyc02g088040.1 170 109 95 89 106 134 97 102 138 176 132 160 143 107 138 Ribosomal protein L34e superfamily protein (AHRD V3.3 *** A0A2U1Q180_ARTAN) AT5G15260 Solyc02g088050.1 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 Plasma membrane ATPase 1 (AHRD V3.3 *-* A0A2G3D9N1_CAPCH) Solyc02g088060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plasma membrane ATPase (AHRD V3.3 *-* A0A328D3W0_9ASTE) Solyc02g088070.3 631 832 483 620 972 899 829 954 490 783 524 753 571 516 530 Dof zinc finger protein (AHRD V3.3 *** A0A2K3PAB0_TRIPR) AT5G39660 Solyc02g088080.2 9 10 28 42 13 19 6 13 28 22 45 25 10 13 3 Unknown protein Solyc02g088090.1 244 68 117 46 1 3 2 0 39 23 437 67 114 133 118 Calmodulin-like protein 45 (AHRD V3.3 *** A0A2P0QD45_CAMSI) AT3G29000 Solyc02g088100.3 752 1737 2541 2685 1486 1484 1399 1196 3157 2991 4387 2029 2494 1780 4955 expansin precursor 5 Solyc02g088110.4 2403 1632 1406 1345 1254 1249 1409 1337 1120 1449 1308 1293 1736 1650 1618 Polypyrimidine tract-binding protein (AHRD V3.3 *** B6U4H8_MAIZE) AT3G01150 Solyc02g088120.4 71 96 133 131 120 123 145 124 167 111 88 152 94 120 110 KH domain-containing protein (AHRD V3.3 *** A0A1J3DQI6_NOCCA) AT5G15270 Solyc02g088130.1 82 105 102 69 47 63 70 64 64 97 132 51 187 135 108 transmembrane protein (AHRD V3.3 *** AT3G29034.1) AT3G29034 Solyc02g088140.3 14 18 10 17 16 22 15 34 15 21 16 5 9 29 21 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3B2T2_CAPCH) Solyc02g088150.1 2 10 3 8 8 10 11 13 4 3 9 5 5 3 14 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A1U8EZC2_CAPAN) Solyc02g088160.4 20 30 63 30 5 25 20 16 16 18 25 33 12 18 17 Casparian strip membrane protein 1 (AHRD V3.3 *-* CASP1_SOLTU) Solyc02g088170.2 237 258 219 292 276 327 245 283 275 242 241 212 241 264 192 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3ACG6_CAPAN) AT5G15300 Solyc02g088180.3 2777 554 282 297 43 65 57 25 147 577 413 125 192 530 569 NAC domain-containing protein (AHRD V3.3 *** A0A2G2V9A8_CAPBA) Solyc02g088190.4 791 615 404 504 311 322 277 323 791 525 621 543 582 568 441 MYB transcription factor (AHRD V3.3 *-* A0A0U3IU11_MESCR) AT3G01140 Solyc02g088200.4 258 124 77 85 33 25 37 23 80 138 127 76 211 136 129 Putative eukaryotic LigT (AHRD V3.3 *-* AT3G16230.2) Solyc02g088210.3 227 183 231 244 266 208 273 173 164 222 240 177 257 270 194 SPX domain-containing protein 4 (AHRD V3.3 *** A0A2G2V9B6_CAPBA) AT5G15330 Solyc02g088220.3 1596 1162 1532 1378 1815 1897 1507 2108 1728 2001 1320 1647 1404 1665 788 Phosphate transporter PHO1-like protein 9 (AHRD V3.3 *** A0A2G3D9P5_CAPCH) AT3G29060 Solyc02g088230.3 312 532 695 579 788 671 784 684 903 380 568 378 547 573 714 Phosphate transporter PHO1-like protein 9 (AHRD V3.3 *** A0A2G2V9D0_CAPBA) AT1G14040 Solyc02g088240.4 12 24 154 65 3 5 3 17 31 42 42 7 13 32 16 Phosphate transporter PHO1-like protein 5 (AHRD V3.3 *** A0A2G3D9P2_CAPCH) AT3G29060 Solyc02g088260.3 2374 2847 3716 2617 2992 2696 2354 2695 3991 3164 3359 2671 3449 3027 3833 glycine-rich protein (AHRD V3.3 *-* AT3G29075.1) AT5G39570 Solyc02g088270.3 14 3 7 18 0 2 0 0 11 7 41 5 15 4 26 hypothetical protein (DUF1997) (AHRD V3.3 *** AT5G39530.1) Solyc02g088280.3 385 304 386 279 276 295 359 380 254 288 295 247 342 320 426 F-box domain, cyclin-like protein (AHRD V3.3 --* A0A2U1P717_ARTAN) Solyc02g088290.4 935 696 745 622 666 658 718 669 802 857 792 684 661 827 928 ARF guanine-nucleotide exchange factor GNL1 (AHRD V3.3 *** A0A1U8FQ69_CAPAN) Solyc02g088300.3 1720 1027 1253 1195 932 985 1023 940 1202 1259 1269 1204 1019 1030 1163 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *** A0A2U1KPJ9_ARTAN) AT3G01100 Solyc02g088310.1 9 0 8 4 5 8 5 4 1 4 4 2 8 9 13 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2V9D3_CAPBA) Solyc02g088320.4 20 67 66 69 39 74 67 52 48 16 62 27 25 45 89 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A1J3E5X3_NOCCA) Solyc02g088330.2 185 353 379 517 601 611 630 568 445 316 377 361 200 292 345 Protein kinase domain (AHRD V3.3 *** A0A200QSE8_9MAGN) Solyc02g088340.4 749 423 937 619 208 247 217 214 1010 1089 2201 477 352 555 447 WRKY transcription factor 3 Solyc02g088350.4 1571 1108 1195 1462 1287 1539 1450 1245 1121 1449 1623 1158 585 974 1437 glutamate NMDA receptor subunit epsilon-1%2C putative (DUF3598) (AHRD V3.3 *** AT3G29185.1) AT3G29185 Solyc02g088360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stomatin family protein (SPFH domain/Band 7 family protein) (AHRD V3.3 *-* A0A166USA6_9PEZI) Solyc02g088370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 --* AT5G54100.1) Solyc02g088380.4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 9 Early nodulin-like protein 20 (AHRD V3.3 *** F4IVN9_ARATH) AT2G27035 Solyc02g088390.4 74 336 318 339 498 469 412 448 373 178 332 258 188 193 147 Lamin-like protein (AHRD V3.3 *** A0A2G2V9B8_CAPBA) AT5G15350 Solyc02g150143.1 354 199 232 376 145 171 175 159 206 255 323 232 210 228 304 Unknown protein Solyc02g088410.1 0 0 0 3 0 2 0 1 2 0 0 0 0 0 0 Unknown protein Solyc02g088420.3 0 4 8 7 8 3 11 6 6 3 3 4 0 0 10 Unknown protein Solyc02g150144.1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g088430.1 9 9 19 14 9 4 18 5 8 15 22 9 6 14 2 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G2XW06_CAPAN) Solyc02g088440.1 39 17 31 18 12 20 25 15 16 21 6 6 13 14 11 Unknown protein Solyc02g088450.4 373 175 235 286 138 181 234 125 164 189 232 113 155 182 322 Unknown protein Solyc02g088460.4 244 528 446 484 650 571 535 500 476 469 525 541 608 668 647 Chorismate mutase (AHRD V3.3 *** B5LAU1_CAPAN) AT3G29200 Solyc02g088470.1 244 188 198 242 204 237 255 247 322 326 150 398 187 190 230 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3D9J1_CAPCH) AT3G29230 Solyc02g088480.3 1031 516 545 438 368 311 308 291 654 810 662 447 529 536 694 T-box transcription factor%2C putative (DUF863) (AHRD V3.3 *-* AT1G69360.1) Solyc02g088490.3 3522 2390 1855 1615 1667 1461 1239 1729 2174 3489 1452 2167 2074 1752 1469 Saccharopine dehydrogenase (AHRD V3.3 *** A0A2U1NI14_ARTAN) AT5G39410 Solyc02g088500.1 36 30 14 47 43 46 41 48 27 15 33 24 27 42 28 Glycosyltransferase (AHRD V3.3 *** A0A2I4FYE0_9ROSI) Solyc02g088510.4 23 23 31 45 38 60 50 46 39 44 42 36 31 46 42 Saccharopine dehydrogenase (AHRD V3.3 *** A0A2U1NI14_ARTAN) Solyc02g088520.4 107 101 127 64 44 102 142 41 100 34 170 66 74 147 261 Unknown protein Solyc02g088530.1 109 136 58 150 35 61 29 64 97 109 54 64 45 68 99 Unknown protein Solyc02g088540.3 362 424 438 357 293 345 411 279 349 275 288 290 452 449 283 tRNA (Guanosine(18)-2'-O)-methyltransferase (AHRD V3.3 *** A0A1J3CNY1_NOCCA) AT5G15390 Solyc02g088550.4 2832 2291 2067 2252 2277 2048 2156 1966 2314 2365 1961 2047 2231 2467 2040 Ubiquitin conjugation factor E4 (AHRD V3.3 *-* R4XJD8_TAPDE) Solyc02g088560.4 578 2027 879 1217 1628 2128 2155 1727 2572 614 772 836 1634 2150 1601 Cyclic nucleotide-gated ion channel protein, putative (AHRD V3.3 *** G7L453_MEDTR) AT5G15410 Solyc02g088570.2 436 407 248 406 231 348 330 338 333 437 304 264 347 320 375 RING/U-box superfamily protein (AHRD V3.3 *** A0A2K3MXG0_TRIPR) AT3G29270 Solyc02g088580.1 320 242 284 184 157 146 100 112 252 263 225 170 211 209 350 Plant calmodulin-binding protein-like protein (AHRD V3.3 *-* AT5G39380.5) AT5G15430 Solyc02g088590.4 1282 826 1180 1301 1074 1139 1084 920 844 1323 1186 1057 780 839 1381 EID1-like F-box protein 1 (AHRD V3.3 *** A0A1U8FRH3_CAPAN) AT5G39360 Solyc02g088600.4 1010 505 689 612 333 369 349 305 463 526 640 485 495 547 631 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2V9F7_CAPBA) AT3G29290 Solyc02g088610.4 1458 1249 1263 804 1234 1093 1130 1185 1605 1199 1014 1335 1275 1228 1112 LeHSP110/ClpB heat shock protein AT5G15450 Solyc02g088620.3 463 341 551 405 286 384 291 227 388 424 683 305 481 403 507 Membrane-anchored ubiquitin-fold protein (AHRD V3.3 *** A0A1U8FQ33_CAPAN) AT5G15460 Solyc02g088630.4 292 566 1200 675 519 624 668 538 517 482 970 350 360 490 666 Hexosyltransferase (AHRD V3.3 *** A0A1U8FQ34_CAPAN) AT5G15470 Solyc02g088650.1 43 78 61 49 32 26 34 38 52 41 40 85 65 103 74 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3D998_CAPCH) AT5G39350 Solyc02g088660.4 620 956 913 1357 1457 1200 1106 1772 953 1402 883 1351 925 1002 505 BAG family molecular chaperone regulator 8, chloroplastic-like (AHRD V3.3 *-* A0A2I4EPR7_9ROSI) Solyc02g088670.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 UDP-glucose 6-dehydrogenase 1 (AHRD V3.3 *** A0A2G3D957_CAPCH) Solyc02g088690.4 1039 3408 2622 1691 2112 1720 1640 2136 3365 2923 4608 2571 2635 2176 2536 UDP-glucose 6-dehydrogenase (AHRD V3.3 *** A0A2G2XIY2_CAPBA) Solyc02g088680.1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 Unknown protein Solyc02g088700.4 4328 6357 3553 5596 5106 4508 4042 6098 5590 5731 3730 6016 5774 5223 3118 Mitochondrial processing peptidase (AHRD V3.3 *** Q41444_SOLTU) AT3G02090 Solyc02g088710.3 2 9 0 13 0 4 6 6 4 1 0 0 2 12 4 4-coumarate--CoA ligase-like 1 (AHRD V3.3 *** A0A1U8FQ18_CAPAN) AT1G62940 Solyc02g088720.4 3488 2717 3535 2786 2935 3336 3290 2781 2379 2742 3611 2747 2786 2834 3589 RNA-binding family protein (AHRD V3.3 *-* A0A1Y1HPM2_KLENI) Solyc02g088730.2 623 367 376 378 421 532 569 519 359 415 370 411 389 445 492 F-box protein (AHRD V3.3 *** A0A1U8FQ14_CAPAN) AT5G39250 Solyc02g088735.1 22 23 14 20 24 16 27 17 25 32 8 25 26 10 8 Unknown protein Solyc02g088740.1 141 544 934 382 846 990 783 867 663 279 780 462 374 575 340 hypothetical protein (AHRD V3.3 *** AT3G29370.1) AT3G29370 Solyc02g088750.2 0 5 0 0 65 27 48 57 12 0 21 10 0 15 0 Glycosyltransferase (AHRD V3.3 *** A0A172J2G4_PUEML) Solyc02g088760.2 1617 1345 1248 1108 1141 1230 1094 961 1003 846 897 908 1344 1432 1369 50S ribosomal protein L7/L12 (AHRD V3.3 *** A0A1U8GY39_CAPAN) AT4G36420 Solyc02g088770.3 221 150 119 181 98 105 113 129 120 121 96 132 130 174 76 Mitochondrial carrier protein, expressed (AHRD V3.3 *** Q6AVS9_ORYSJ) AT5G66380 Solyc02g088780.4 369 564 423 262 266 257 252 262 211 227 228 333 669 565 467 Ribosome biogenesis protein WDR12 homolog (AHRD V3.3 *** A0A2G3D985_CAPCH) AT5G15550 Solyc02g088790.3 347 710 727 486 406 440 422 436 413 216 418 478 1060 817 688 RNA-binding protein (AHRD V3.3 *-* Q941H8_SOLTU) AT5G61030 Solyc02g088800.2 711 667 891 801 515 799 738 595 934 802 940 778 749 854 812 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A2G3ABK1_CAPAN) AT3G29400 Solyc02g088810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g088820.4 410 1042 1244 887 1488 1330 1017 1805 807 664 742 1053 587 687 538 Carboxypeptidase (AHRD V3.3 *** A0A2G3ABI4_CAPAN) AT3G02110 Solyc02g088830.4 92 1370 1573 2067 3674 3382 3492 3436 1314 687 1660 1846 220 656 740 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* AT3G02120.1) Solyc02g088840.3 5 23 9 28 36 33 40 33 15 9 20 29 36 15 2 Suppressor SRP40-like protein (AHRD V3.3 *-* F4IT95_ARATH) AT3G02125 Solyc02g088850.3 166 248 202 220 185 270 294 326 122 158 71 259 148 203 178 Endonuclease or glycosyl hydrolase (AHRD V3.3 *-* A0A2U1M909_ARTAN) Solyc02g088860.2 0 0 0 0 0 0 2 2 0 0 0 1 0 0 0 Endonuclease or glycosyl hydrolase (AHRD V3.3 *-* A0A2U1M909_ARTAN) AT3G62210 Solyc02g088870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endonuclease or glycosyl hydrolase (AHRD V3.3 *-* A0A2U1M909_ARTAN) Solyc02g088880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endonuclease or glycosyl hydrolase (AHRD V3.3 *-* A0A2U1M909_ARTAN) AT3G62210 Solyc02g088890.2 6 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Endonuclease or glycosyl hydrolase (AHRD V3.3 *-* A0A2U1M909_ARTAN) AT3G62050 Solyc02g088900.3 206 607 967 946 1090 1088 1362 883 841 699 685 997 741 783 567 TPT domain-containing protein (AHRD V3.3 *** A0A1Q3CE75_CEPFO) AT3G17430 Solyc02g088905.1 71 99 121 122 176 147 117 239 248 178 85 252 93 178 106 Unknown protein Solyc02g088910.3 1958 1205 839 917 1360 1368 1274 1129 1223 1533 1084 1517 1134 1683 1673 Ninja-family protein AFP3 (AHRD V3.3 *** A0A1J3DL53_NOCCA) AT3G29575 Solyc02g088920.4 277 338 302 350 264 344 404 301 351 235 302 286 293 296 461 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *** F4K1Y4_ARATH) Solyc02g088930.4 1215 2092 1546 1737 2097 1627 1732 2129 1482 1567 1482 1605 1923 1640 1266 furry (AHRD V3.3 *** AT5G08060.1) AT5G08060 Solyc02g088940.3 1252 813 1606 1101 626 837 969 624 831 864 984 582 717 1063 1585 CTP synthase (AHRD V3.3 *-* A0A2G3A9D9_CAPAN) Solyc02g088950.3 14 17 32 2 8 6 13 8 8 14 11 5 4 19 6 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc02g088953.1 58 62 101 50 66 61 48 44 24 69 34 43 38 50 48 MUTL protein homolog 3 (AHRD V3.3 --* AT4G35520.3) Solyc02g088955.1 119 64 107 56 88 84 99 61 36 54 99 44 49 113 85 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc02g088957.1 200 115 147 145 82 105 110 91 66 66 75 72 71 91 140 Unknown protein Solyc02g088980.3 10 9 1 5 0 0 4 3 12 10 15 17 2 6 0 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G3A9Q9_CAPAN) Solyc02g150145.1 20 19 13 11 16 20 10 12 26 35 6 9 12 15 25 DNA mismatch repair protein MLH3 isoform X1 (AHRD V3.3 --* XP_010316472.1) Solyc02g150146.1 371 194 488 247 106 137 168 125 87 188 339 78 332 220 240 Receptor-like protein kinase (AHRD V3.3 *-* A0A2K3LZH3_TRIPR) Solyc02g089020.2 797 455 799 626 242 343 220 175 351 546 558 549 194 385 228 TCP transcription factor 5 Solyc02g089030.1 37 128 308 154 133 232 198 111 395 82 804 145 105 165 235 LONGIFOLIA protein (AHRD V3.3 *-* A8MQH9_ARATH) Solyc02g089040.3 1 3 1 1 1 0 8 3 4 2 0 6 2 1 16 Unknown protein Solyc02g089050.4 281 1022 1074 653 948 1009 1088 993 3048 763 2576 1011 857 972 780 protein LONGIFOLIA 1-like (AHRD V3.3 *** A0A2I4EBA4_9ROSI) Solyc02g089060.3 155 162 190 148 100 117 108 129 143 110 188 80 224 167 138 Methyl esterase 11 (AHRD V3.3 *** A0A2U1LRP6_ARTAN) AT3G29770 Solyc02g089065.1 1608 2935 5367 5019 6371 6812 6975 4691 3759 3097 7581 3564 2397 2464 4529 Protein SPIRAL1 (AHRD V3.3 *** A0A1U8FPZ4_CAPAN) Solyc02g089070.3 1575 2436 1742 1614 2115 1934 1754 1998 1430 1413 1327 1459 2072 1894 1573 Eukaryotic translation initiation factor 3 subunit M (AHRD V3.3 *** A0A2G2XHI4_CAPBA) AT3G02200 Solyc02g089080.2 401 1061 1382 1066 1342 1163 1279 1029 1285 632 1304 810 841 566 1258 Protein RALF-like 27 (AHRD V3.3 --* A0A2G3D352_CAPCH) Solyc02g089090.3 4208 2895 2550 2291 557 610 559 690 2517 4601 2407 1752 4981 2615 2481 Receptor-like protein kinase FERONIA (AHRD V3.3 *** A0A1U8FPY8_CAPAN) Solyc02g089100.3 619 848 860 806 672 810 687 550 560 462 678 461 1071 939 1002 small acidic-like protein (AHRD V3.3 *** AT3G02220.1) AT3G02220 Solyc02g089110.3 454 560 488 513 447 527 526 527 469 375 514 437 550 589 497 Mitochondrial carrier protein (AHRD V3.3 *** A0A200PRK7_9MAGN) AT5G15640 Solyc02g089120.4 1324 559 246 576 322 289 275 303 480 786 284 284 373 314 312 COBRA-like protein (AHRD V3.3 *** K4BC66_SOLLC) AT5G60920 Solyc02g089130.4 7 107 35 35 83 48 48 57 33 68 82 32 9 30 98 COBRA-like protein (AHRD V3.3 *** K4BC67_SOLLC) AT5G15630 Solyc02g089140.3 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 B12D protein (AHRD V3.3 *** A0A2U1M961_ARTAN) AT3G29970 Solyc02g089150.4 52 39 14 11 5 9 2 3 8 9 1 13 27 10 2 PI-PLC X domain-containing protein (AHRD V3.3 *** A0A1U8FSV1_CAPAN) AT1G13680 Solyc02g089160.3 1235 909 1463 993 672 871 544 640 704 1275 2506 771 1698 1088 1648 dwarf AT5G38970 Solyc02g089170.4 11 12 60 49 10 6 8 10 19 23 24 33 11 15 28 Alpha-1,4-glucan-protein synthase [udp-forming] 1 (AHRD V3.3 *** A0A1J6L3S7_NICAT) Solyc02g089175.2 1231 1621 1000 1104 1331 1206 1211 1323 1139 1041 848 1102 1780 1528 978 tRNA (guanine(26)-N(2))-dimethyltransferase (AHRD V3.3 *** A0A2G3D922_CAPCH) AT5G15810 Solyc02g089190.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 29 AT3G30210 Solyc02g089200.4 1816 682 1185 1336 268 464 198 341 293 963 302 1026 47 616 226 TM29 AT5G15800 Solyc02g089210.4 881 515 845 356 529 607 496 725 599 683 514 696 635 537 421 MADS box transcription factor (AHRD V3.3 *** Q689E7_GENTR) Solyc02g089220.4 384 368 454 445 609 592 610 658 748 572 543 660 364 427 422 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** F4J609_ARATH) AT3G02300 Solyc02g089230.3 593 791 727 703 1239 984 943 1013 966 931 673 1107 1042 784 753 DSBA-like thioredoxin domain (AHRD V3.3 *** A0A200R2H4_9MAGN) AT5G38900 Solyc02g089240.3 521 358 493 634 454 486 462 415 443 513 540 397 424 364 599 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QNZ5_ARTAN) AT3G02290 Solyc02g089250.4 8117 15344 6347 40994 14910 10738 15191 18317 19212 27169 12948 13968 25897 13971 13812 Pollen Ole e 1 allergen/extensin (AHRD V3.3 *-* A0A200R2G7_9MAGN) AT5G15780 Solyc02g089260.4 3551 3215 3664 4403 2876 3572 3725 2855 4119 3454 4160 3398 3777 4218 4706 Auxin transport protein BIG (AHRD V3.3 *** A0A2G3D8Z1_CAPCH) AT3G02260 Solyc02g089270.1 44 45 49 55 65 52 52 50 46 44 31 55 35 33 44 Unknown protein Solyc02g089280.3 678 805 832 636 527 614 618 532 577 400 625 565 1059 862 799 40S ribosomal protein S9-2 (AHRD V3.3 *** A0A2I0VJL8_9ASPA) AT5G15750 Solyc02g089290.3 492 459 979 551 475 490 505 404 448 535 613 486 659 605 627 Protein kinase domain (AHRD V3.3 *** A0A200Q371_9MAGN) AT5G15730 Solyc02g089295.1 15 13 6 12 18 10 3 11 14 17 4 9 15 5 7 Unknown protein Solyc02g089300.3 52 26 16 17 15 16 7 20 14 10 17 11 41 24 16 Unknown protein Solyc02g089310.1 248 247 274 246 251 288 280 320 247 290 266 267 239 241 267 F-box/kelch-repeat protein (AHRD V3.3 *** A0A2G3D934_CAPCH) AT5G15710 Solyc02g089320.3 646 435 526 539 430 465 413 351 436 517 652 509 486 476 727 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4J5H1_ARATH) AT3G30380 Solyc02g089330.3 98 55 27 50 22 57 30 44 54 63 20 39 46 59 41 DNA-directed RNA polymerase (AHRD V3.3 *-* A0A2G3ABW1_CAPAN) Solyc02g089340.4 691 331 451 389 247 208 250 227 303 288 356 310 343 550 575 DNA-directed RNA polymerase (AHRD V3.3 *** A0A2G3ABW1_CAPAN) Solyc02g089350.3 315 905 2084 1942 471 459 467 395 1629 887 5445 854 630 1547 4615 Gibberellin regulated protein (AHRD V3.3 *** A0A2U1PE48_ARTAN) Solyc02g089360.4 2457 1739 1362 1457 1457 1225 1392 1608 1667 1935 1484 1589 1481 1783 1860 SMAD/FHA domain-containing protein (AHRD V3.3 *** A0A2U1Q3C4_ARTAN) AT5G38840 Solyc02g089370.2 1066 1018 709 825 876 874 973 1141 1397 1086 722 1016 810 1114 922 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1PEI4_ARTAN) Solyc02g089380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g089390.3 368 225 280 287 255 281 260 177 256 250 329 240 280 294 280 ARM repeat superfamily protein (AHRD V3.3 *-* A0A2U1PEI4_ARTAN) Solyc02g089400.4 1071 526 513 514 249 323 285 233 372 669 511 280 626 536 659 Amino acid transporter (AHRD V3.3 *** A0A200QY84_9MAGN) AT3G30390 Solyc02g089410.3 266 255 520 449 301 366 306 278 328 317 404 282 467 375 448 RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) Solyc02g089420.1 302 315 257 562 116 114 110 91 316 265 176 204 639 414 408 Basic leucine zipper 43 (AHRD V3.3 *** A0A1U8FPR4_CAPAN) AT3G30530 Solyc02g089430.1 0 13 9 5 5 3 9 19 7 4 1 12 4 5 0 Unknown protein Solyc02g089440.3 488 1018 1003 858 1072 865 901 973 1161 719 922 708 1014 802 1064 Hexosyltransferase (AHRD V3.3 *** A0A2G2XHQ5_CAPBA) AT3G02350 Solyc02g089450.1 0 1 1 1 7 0 2 0 0 2 10 0 0 0 1 protein GLUTAMINE DUMPER 6-like (AHRD V3.3 *** A0A2I4EB38_9ROSI) Solyc02g089460.1 6 21 38 11 117 88 121 58 8 1 3 1 9 29 109 protein GLUTAMINE DUMPER 6-like (AHRD V3.3 *** A0A2I4EB38_9ROSI) Solyc02g089465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3D5A9_NOCCA) Solyc02g089470.1 0 0 11 0 0 1 0 0 0 0 0 0 0 3 9 Protein GLUTAMINE DUMPER 5 (AHRD V3.3 -** GDU5_ARATH) Solyc02g089480.1 6 4 43 40 9 16 9 8 10 5 40 2 10 12 38 protein GLUTAMINE DUMPER 4-like (AHRD V3.3 *** A0A2I4EBB2_9ROSI) Solyc02g089490.4 14 17 7 5 13 6 7 9 6 8 1 2 6 9 4 Unknown protein Solyc02g089500.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein CONSTANS-LIKE 2 (AHRD V3.3 *-* A0A2G3ABV8_CAPAN) Solyc02g089510.3 200 58 48 84 56 15 34 26 34 60 65 28 36 66 44 Unknown protein Solyc02g089520.2 3 4 8 2 12 0 8 11 10 9 0 6 2 8 30 Zinc finger protein CONSTANS-LIKE 2 (AHRD V3.3 *** A0A2G3ABV8_CAPAN) AT3G02380 Solyc02g089530.3 55 25 95 42 16 37 25 10 25 17 80 25 27 32 59 Unknown protein Solyc02g089540.3 2167 863 11 575 522 428 296 533 407 340 27 156 278 44 19 CONSTANS 1 AT3G02380 Solyc02g089550.3 339 615 755 791 1003 914 962 997 798 518 891 677 596 696 633 protein NSP-INTERACTING KINASE 1 (AHRD V3.3 *** A0A1U8FR57_CAPAN) AT5G16000 Solyc02g089560.4 257 367 275 282 370 252 293 418 320 320 161 326 313 379 215 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200RAJ4_9MAGN) Solyc02g089570.3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 stress-induced protein KIN2-like (AHRD V3.3 *** XP_004232116.1) AT5G38760 Solyc02g089580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 Late embryogenesis abundant protein (LEA) family protein (AHRD V3.3 -** AT5G38760.1) AT5G38760 Solyc02g089590.3 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 Late embryogenesis abundant protein (LEA) family protein (AHRD V3.3 *** A0A2U1ND46_ARTAN) AT5G38760 Solyc02g089600.3 1366 1030 1395 830 721 890 724 560 763 573 1234 686 1410 1251 2181 Ribosomal RNA-processing protein 7 (AHRD V3.3 *-* A0A200QPW1_9MAGN) AT5G38720 Solyc02g089610.2 8982 6567 6512 4846 4188 4536 4255 3877 3080 5915 5427 3760 4924 2492 3422 S-adenosylmethionine decarboxylase 2 AT3G25570 Solyc02g150147.1 2092 1573 969 1086 1010 815 732 1003 699 1527 679 953 1193 523 558 S-adenosylmethionine decarboxylase (AHRD V3.3 *-* Q6KC47_PRUPE) Solyc02g089620.3 69 1863 1586 1378 599 668 675 732 4331 1122 845 772 730 1191 238 proline dehydrogenase AT3G30775 Solyc02g089630.3 1 0 0 0 0 0 0 0 0 2 3 0 2 5 0 Proline dehydrogenase (AHRD V3.3 *** A0A2G2XIU2_CAPBA) AT3G30775 Solyc02g089640.3 401 281 543 215 256 260 261 164 379 170 1817 279 262 252 630 Cellulose-synthase-like C4 (AHRD V3.3 *** A0A2U1LSH2_ARTAN) AT3G28180 Solyc02g089650.3 906 329 298 420 270 202 244 208 321 386 419 223 227 421 882 hypothetical protein (DUF1262) (AHRD V3.3 *** AT1G13520.1) AT1G61600 Solyc02g089655.1 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 Unknown protein Solyc02g089660.2 120 63 84 70 64 62 66 61 52 63 83 23 87 71 123 hypothetical protein (AHRD V3.3 *** AT3G19660.1) Solyc02g089670.4 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 19 (AHRD V3.3 *-* A0A2G3ABU1_CAPAN) Solyc02g089680.4 449 656 590 457 710 644 551 735 713 672 869 614 546 460 379 Protein trichome birefringence-like 19 (AHRD V3.3 *** A0A2G3ABU9_CAPAN) AT5G15900 Solyc02g089690.3 125 331 338 421 202 244 184 178 438 260 234 235 567 432 645 Protein trichome birefringence-like 19 (AHRD V3.3 *** A0A2G2XIK2_CAPBA) AT5G15900 Solyc02g089700.4 10 10 13 25 14 2 2 8 12 18 56 8 28 30 199 Protein trichome birefringence-like 19 (AHRD V3.3 *** A0A1U8FI69_CAPAN) Solyc02g089710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 19 (AHRD V3.3 *** A0A1U8FI69_CAPAN) Solyc02g089720.3 600 353 326 441 145 166 196 249 324 531 441 380 218 329 551 Beta-glucan-binding protein 1 (AHRD V3.3 *** A0EJF0_MEDTR) AT5G15870 Solyc02g089730.1 72 897 333 656 1454 1302 1167 1669 681 335 446 831 95 321 269 Endo-1,3(4)-beta-glucanase 1 (AHRD V3.3 *** A0A1J3K097_NOCCA) Solyc02g089740.3 23 105 66 84 171 99 99 153 81 74 40 108 54 72 62 Unknown protein Solyc02g089750.4 78 182 209 172 260 247 226 268 213 186 158 175 119 152 99 Proline-rich receptor-like protein kinase PERK9 (AHRD V3.3 *-* A0A2G3D983_CAPCH) Solyc02g089760.3 106 193 440 367 359 391 440 277 211 144 303 289 199 208 278 Protein kinase family protein (AHRD V3.3 *-* E5GBJ3_CUCME) Solyc02g089780.3 512 329 94 117 31 20 39 15 213 190 243 90 191 212 145 dihydroflavonol 4-reductase/flavanone protein (AHRD V3.3 *-* AT3G02420.2) Solyc02g089790.4 98 123 88 72 78 124 116 89 58 88 66 66 118 107 111 Histone acetyltransferase of the CBP family 12 (AHRD V3.3 *-* F4I4I8_ARATH) Solyc02g089800.3 2149 1941 1992 1430 1634 1772 1662 1747 1951 1411 1869 1503 1790 1657 2081 Nuclear matrix constituent-like protein 1 (AHRD V3.3 *** E5GCT1_CUCME) AT1G67230 Solyc02g089810.3 1123 1480 811 1234 1056 1166 1257 1481 1037 1174 784 1102 1247 1390 1077 Translation initiation factor eIF-2B subunit delta (AHRD V3.3 *** A0A1J3G9G6_NOCCA) AT5G38640 Solyc02g089820.4 628 1132 1341 1118 1343 1338 1437 1346 1344 855 1144 1296 1557 1307 1159 Cyclin-B1-2 (AHRD V3.3 *** A0A2G3D967_CAPCH),Pfam:PF05348 AT5G38650 Solyc02g089830.2 28 79 89 81 224 270 250 259 66 62 111 31 106 38 17 TCP transcription factor 7 Solyc02g089840.3 167 249 254 384 360 312 263 331 393 273 187 246 298 321 267 Calcium uniporter protein 2, mitochondrial (AHRD V3.3 *** A0A2G3ABZ2_CAPAN) Solyc02g089850.3 278 362 475 590 443 589 522 271 394 213 528 213 370 427 824 Calcium uniporter protein 1, mitochondrial (AHRD V3.3 *** A0A2G3D8W7_CAPCH) Solyc02g089860.1 86 72 73 86 59 57 40 44 56 138 128 118 52 39 120 Elongation of fatty acids protein 3-like (AHRD V3.3 *** A0A2G3D8W4_CAPCH) AT4G36830 Solyc02g089870.3 2518 1281 1551 1599 1040 1219 957 1056 1176 1891 1683 1437 1284 1397 1777 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G3D341_CAPCH) AT1G19310 Solyc02g089880.4 82 290 129 325 368 344 309 304 359 375 180 289 250 215 367 Hexosyltransferase (AHRD V3.3 *** A0A1U8G2N1_CAPAN) Solyc02g089890.4 174 176 200 126 225 192 210 150 131 122 77 134 202 195 145 PQ-loop repeat family protein / transmembrane family protein (AHRD V3.3 *** Q94AH7_ARATH) AT4G36850 Solyc02g089900.1 597 509 832 458 262 380 321 337 387 483 1539 480 335 417 524 Protein kinase domain (AHRD V3.3 *** A0A200Q286_9MAGN) AT2G23770 Solyc02g089910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g089920.1 2 4 0 0 0 1 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *** A0A200R7I5_9MAGN) Solyc02g089930.4 547 225 147 404 84 62 68 40 175 147 262 49 324 245 510 Protein DA1 (AHRD V3.3 *** A0A2G3D8V7_CAPCH) AT4G36860 Solyc02g089940.4 1424 857 972 1018 682 792 664 575 858 817 1020 1230 432 745 867 BEL1-like homeodomain protein 4 (AHRD V3.3 *** A0A2G2XIM2_CAPBA) AT4G36870 Solyc02g089950.2 873 1296 1098 1004 1587 1168 1021 1517 1458 1164 1031 1234 989 1190 938 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G3D909_CAPCH) AT3G50780 Solyc02g089960.3 244 104 130 111 64 60 49 29 77 150 129 59 252 148 164 transmembrane family 220 helix protein (AHRD V3.3 *** AT2G23755.1) AT2G23755 Solyc02g089970.3 1239 1292 1316 1639 1656 1611 1655 1704 1970 1655 1251 1567 1320 1519 1121 Histone-lysine N-methyltransferase SUVR5-like protein (AHRD V3.3 *** A0A2K3NQM7_TRIPR) AT2G23740 Solyc02g089980.3 731 1013 1223 1156 1499 1529 1463 1567 1288 1072 1010 1340 1208 1271 827 electron transporter%2C putative (Protein of unknown function%2C DUF547) (AHRD V3.3 *** AT5G66600.9) AT5G66600 Solyc02g089990.1 127 98 270 64 40 72 36 30 70 62 604 136 55 103 181 HTH-type transcriptional regulator (AHRD V3.3 *** A0A2P5FXV7_TREOI) AT2G23690 Solyc02g090000.3 220 85 143 144 95 82 72 55 70 165 151 110 98 104 135 CASP-like protein (AHRD V3.3 *** A0A1Q3CXS6_CEPFO) AT3G50810 Solyc02g090010.3 227 166 238 208 129 133 123 130 149 188 240 146 229 150 270 Molybdopterin synthase sulfur carrier subunit (AHRD V3.3 *** A0A2G3ABB3_CAPAN) AT4G10100 Solyc02g090020.4 499 240 265 256 192 209 249 114 194 269 357 219 168 250 373 stress regulated protein AY873991 AT5G27290 Solyc02g090030.2 4310 5429 4164 4266 8554 7367 6921 8599 6568 5962 5164 6058 3893 3069 5007 33 kDa oxygen-evolving protein AT3G50820 Solyc02g090040.2 14 5 16 12 5 5 3 4 1 14 0 10 12 3 1 CTP synthase (AHRD V3.3 *-* A0A2G3A9D9_CAPAN) Solyc02g090045.1 21 17 5 29 16 13 19 12 7 20 11 17 22 5 14 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc02g090060.1 29 23 63 33 33 53 57 30 18 10 27 23 40 47 49 Unknown protein Solyc02g090070.3 421 681 531 554 438 606 496 552 733 481 695 600 573 633 655 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G3D8Z6_CAPCH) AT5G66560 Solyc02g090080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Os03g0673100-like protein (AHRD V3.3 *-* B6TV72_MAIZE) Solyc02g090090.3 1807 1949 1580 1407 1757 1699 1537 1883 1599 1452 1367 1886 1927 1735 1216 ethylene responsive proteinase inhibitor 1 AT4G37210 Solyc02g090100.1 196 353 323 237 489 381 411 494 341 286 248 335 443 242 180 homolog of Synechocystis YCF37 (AHRD V3.3 *** AT2G23670.1) AT2G23670 Solyc02g090110.3 312 188 397 204 96 117 96 87 175 268 343 155 144 226 186 WAK-like kinase AT2G23450 Solyc02g090120.1 35 9 15 5 0 1 1 4 3 15 21 0 23 7 15 hypothetical protein (AHRD V3.3 -** AT5G66985.1) AT5G66985 Solyc02g090130.4 1887 1172 905 1061 709 892 917 895 1062 1107 849 835 1079 1548 1309 Vacuolar protein sorting-associated protein, putative (DUF1162) (AHRD V3.3 *** F4J0L9_ARATH) AT3G50380 Solyc02g090150.1 0 4 7 2 1 1 2 3 0 0 8 4 6 2 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PWP8_ARTAN) AT3G50390 Solyc02g090160.3 1110 1231 1367 1243 1197 1369 1224 1212 1312 1179 1336 1235 1016 1049 1139 Extra-large guanine nucleotide-binding protein 1 (AHRD V3.3 *** A0A2G3D8U4_CAPCH) AT2G23460 Solyc02g090170.3 1 1 8 30 0 2 0 0 3 0 0 0 2 1 0 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3CHQ8_CEPFO) AT4G33280 Solyc02g090180.3 928 682 469 460 317 289 425 291 318 279 361 365 694 711 593 Oligopeptidase B (AHRD V3.3 *** A0A2I0V9Y9_9ASPA) AT5G66960 Solyc02g090190.1 1492 2001 2000 2006 2039 2243 2170 1982 2110 1706 2127 1918 1866 2000 1889 Molybdenum cofactor sulfurase (AHRD V3.3 *** A0A2I0VGU5_9ASPA) AT2G23520 Solyc02g090200.3 1075 870 724 496 1133 928 932 1227 895 912 692 988 591 731 555 Zinc-finger domain of monoamine-oxidase A repressor R1 (AHRD V3.3 *-* A0A200QJF9_9MAGN) Solyc02g090210.3 3 0 1 1 0 0 0 0 3 0 13 2 3 7 13 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3D8U2_CAPCH) AT2G23540 Solyc02g090220.3 930 1366 1502 1117 920 988 679 1133 1540 1362 695 1928 510 1208 602 Dof zinc finger protein PBF (AHRD V3.3 *** A0A2G3D8X0_CAPCH) AT3G50410 Solyc02g090230.4 2269 4571 3656 4160 5131 4503 5044 5722 2944 2823 2821 3836 4959 5072 2725 Nuclear pore complex protein NUP58 (AHRD V3.3 *** A0A2G3D8S1_CAPCH) AT4G37130 Solyc02g090240.4 68 125 99 144 98 145 91 115 65 78 84 113 131 148 110 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QYC4_9MAGN) AT3G50420 Solyc02g090260.3 550 521 409 496 508 675 828 532 606 513 276 401 321 367 462 golgin (AHRD V3.3 *** AT3G50430.1) AT3G50430 Solyc02g090290.3 16 26 26 46 3 5 10 3 31 27 53 17 20 12 38 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A2G3D8R4_CAPCH) AT2G45550 Solyc02g090300.3 21 60 80 109 80 129 75 104 82 52 63 70 85 113 76 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A1U8FQZ4_CAPAN) AT2G45550 Solyc02g090310.1 599 993 874 1115 1440 1284 1150 1404 1488 1379 852 1331 1439 1098 800 Dof zinc finger protein (AHRD V3.3 *** A0A2K3LFN5_TRIPR) Solyc02g090330.3 658 412 484 496 416 447 431 358 446 476 519 545 321 415 508 Meiotically up-regulated protein (AHRD V3.3 *** F4K264_ARATH) AT5G66930 Solyc02g090340.2 210 489 63 288 136 139 154 94 1074 1921 654 1040 382 162 130 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A2G2XIM9_CAPBA) AT2G45550 Solyc02g090350.4 89 202 50 76 75 99 79 98 194 386 46 192 99 20 3 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A2G2XIM9_CAPBA) AT2G45550 Solyc02g090360.3 234 638 4003 537 404 391 420 459 757 1116 3464 902 480 407 1308 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A1U8FPI3_CAPAN) AT5G66920 Solyc02g090370.4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Reticulon-like protein (AHRD V3.3 *** A0A2G3ABJ1_CAPAN) AT2G23640 Solyc02g090380.4 909 656 709 560 477 497 437 552 567 930 785 497 573 482 594 Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *** A0A1P8BE24_ARATH) AT5G66900 Solyc02g090390.4 2147 966 2235 1810 734 756 758 630 2073 1718 2497 1746 1172 2195 2236 Protein kinase (AHRD V3.3 *** O65765_CRAPL) Solyc02g090393.1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc02g090397.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc02g090400.4 38 130 106 69 142 166 117 117 78 62 200 71 82 73 120 Myb family transcription factor (AHRD V3.3 *** A0A2I0WBC3_9ASPA) Solyc02g090410.4 38 20 48 44 19 12 10 8 7 25 31 32 22 13 56 LOB domain-containing protein 36 (AHRD V3.3 *** A0A2G3D8W8_CAPCH) AT5G66870 Solyc02g090420.2 564 843 886 724 775 767 766 783 598 579 679 681 1134 818 786 50S ribosomal protein L25 (AHRD V3.3 *** A0A1J3IIM4_NOCCA) AT5G66860 Solyc02g090430.3 1172 1122 1549 1578 1902 2265 2524 1793 1459 2154 1192 2229 972 1268 1570 MAP kinase kinase kinase 20 AT5G66850 Solyc02g090440.3 38 50 44 33 22 41 32 30 22 71 53 16 37 56 58 Unknown protein Solyc02g090450.3 0 0 2 0 7 15 0 3 1 3 0 2 0 0 0 Peroxidase (AHRD V3.3 *** K4BCJ4_SOLLC) AT1G49570 Solyc02g090460.2 587 190 441 245 112 198 127 161 153 442 403 139 464 348 315 Unknown protein Solyc02g090470.4 2 17 10 19 21 35 16 36 49 16 8 25 20 15 0 Peroxidase (AHRD V3.3 *** K4BCJ6_SOLLC) AT1G49570 Solyc02g090480.4 387 475 782 718 698 769 741 666 941 617 689 817 375 636 657 Peptidyl-prolyl cis-trans isomerase CYP40 (AHRD V3.3 *** A0A2G3ABJ7_CAPAN) Solyc02g090490.3 764 598 914 324 90 73 49 36 311 876 856 189 753 692 482 Patatin (AHRD V3.3 *** A0A059P1E3_CAPAN) Solyc02g090500.3 11 13 14 14 2 3 13 6 7 3 8 10 2 10 9 protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X4 (AHRD V3.3 --* XP_010313619.1) Solyc02g090510.3 901 1245 1233 1416 1750 1837 1709 1807 1436 1298 1150 1399 1113 1272 1208 CDPK-related protein kinase (AHRD V3.3 *** A0A2G3D8R0_CAPCH) AT3G50530 Solyc02g090530.4 2806 1592 1806 1602 1186 1606 1517 1159 1287 1167 2217 1375 1241 1534 2108 Zinc finger CCCH domain-containing protein 62 (AHRD V3.3 *** A0A2G3D8Q8_CAPCH) AT5G66840 Solyc02g090540.4 20 45 5 12 90 56 58 57 28 10 9 16 16 16 0 Glucose/ribitol dehydrogenase (AHRD V3.3 *** A0A2U1NV71_ARTAN) AT3G50560 Solyc02g090545.1 1 0 0 3 0 0 0 0 1 0 1 0 0 1 12 Calcium-transporting ATPase (AHRD V3.3 *** A0A1Q3AP80_CEPFO) Solyc02g090550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g090560.3 5 6 65 8 1 2 0 0 15 34 36 6 18 11 19 Calcium-transporting ATPase (AHRD V3.3 *** A0A200RBT6_9MAGN) Solyc02g090570.4 2344 2941 2346 2724 2859 2923 3006 3421 3296 2882 2210 2923 2534 2896 2506 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1MYP5_ARTAN) AT3G50590 Solyc02g090580.3 145 316 345 369 338 312 381 270 341 132 261 208 232 296 176 ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function%2C DUF547) (AHRD V3.3 *** AT4G37080.3) AT4G37080 Solyc02g090590.1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g090600.2 0 0 0 3 0 1 0 0 0 0 0 0 3 0 0 Precursor of CEP10 (AHRD V3.3 --* PCP10_ARATH) Solyc02g090610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g090620.3 316 330 411 323 466 569 635 518 323 268 290 362 358 254 173 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** F4JKP9_ARATH) AT3G50620 Solyc02g090630.4 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Patatin (AHRD V3.3 *** A0A2G3D8S9_CAPCH) Solyc02g090640.4 0 0 0 0 0 2 0 3 1 0 1 0 0 3 0 Patatin (AHRD V3.3 *-* A0A1U8FQW0_CAPAN) Solyc02g090643.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g090647.1 54 41 39 60 40 87 68 52 45 45 55 63 35 29 51 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein (AHRD V3.3 *-* F4JPA3_ARATH) Solyc02g090650.4 624 471 492 433 317 344 361 333 407 353 374 298 436 452 647 Ran-binding protein in the microtubule-organising centre protein (AHRD V3.3 *** AT5G66810.1) AT5G66810 Solyc02g090660.3 0 0 0 1 0 1 4 0 1 0 0 0 0 0 1 Patatin (AHRD V3.3 *** A0A218WXH7_PUNGR) Solyc02g090670.3 629 870 876 1003 1028 1017 1043 981 844 662 970 744 811 952 1154 Methionine aminopeptidase (AHRD V3.3 *** A0A1U8FPF8_CAPAN) AT4G37040 Solyc02g090680.3 56 184 59 99 94 113 135 100 195 142 210 132 81 109 432 Cyclin-dependent kinase inhibitor (AHRD V3.3 *** A0A2G3D8Q2_CAPCH) AT2G23430 Solyc02g090690.3 103 65 100 73 34 57 75 36 46 58 147 91 71 106 170 Membrane protein (AHRD V3.3 *** Q58FU6_ARATH) AT4G37030 Solyc02g090700.2 2 3 0 6 0 0 0 0 1 0 1 1 0 1 6 membrane protein (AHRD V3.3 *-* AT4G37030.1) Solyc02g090710.3 872 895 1048 851 1006 962 984 1076 1199 1092 1276 1018 1062 967 978 B3 domain-containing protein (AHRD V3.3 *** A0A2G2WIF4_CAPBA) Solyc02g090720.3 746 1004 2571 1544 1281 1259 878 1335 898 1580 1745 2666 548 793 360 BEST plant protein match is: (TAIR:plant.1) protein, putative (AHRD V3.3 *** G7K7Z5_MEDTR) Solyc02g090730.3 1 4 12 17 38 44 28 31 4 5 14 23 0 2 0 fruit weight 2.2 Solyc02g090740.3 437 265 320 399 217 244 288 163 187 351 304 177 239 315 303 Protein DETOXIFICATION (AHRD V3.3 *** A0A2G3D8Q7_CAPCH) Solyc02g090750.4 95 80 38 42 56 37 43 50 56 69 43 54 58 61 63 eukaryotic initiation factor 4A (AHRD V3.3 *** A0A2I4DS26_9ROSI) AT4G37020 Solyc02g090760.4 4933 5544 4738 4924 4631 5288 5607 5380 5542 4693 4290 5117 4806 6019 4034 hypothetical protein (AHRD V3.3 *-* AT3G50370.2) AT3G50370 Solyc02g090770.1 1 0 57 0 2 3 1 1 4 2 21 1 2 3 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3A6X8_CAPAN) Solyc02g090780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g090790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3D8S0_CAPCH) Solyc02g090800.1 0 2 17 0 0 0 0 0 0 0 9 0 0 0 1 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3D8S0_CAPCH) Solyc02g090810.4 64 73 68 61 51 37 36 42 99 78 58 59 96 83 145 Calcium-binding protein CML19 (AHRD V3.3 *** A0A1U8FSU6_CAPAN) Solyc02g090820.3 1086 558 1479 548 133 172 187 163 693 998 1842 673 1519 894 1119 Heat stress transcription factor B-1 (AHRD V3.3 *** A0A2G3D8M4_CAPCH) AT4G36990 Solyc02g090840.3 4374 2787 3931 3663 2684 2840 2756 2196 2319 2677 4623 2604 3127 2875 5255 DUF1685 domain-containing protein (AHRD V3.3 *** A0A1Q3CQK4_CEPFO) AT4G33985 Solyc02g090850.3 7860 4796 4278 4450 3374 3893 4116 3543 4051 4045 4570 4047 3668 4475 4279 CLK4-associating serine/arginine-rich protein (AHRD V3.3 *** A8MS51_ARATH) AT4G36980 Solyc02g090860.3 1933 2568 2191 2084 2253 2381 2408 2321 2008 1746 1804 1981 2675 2595 2307 Phenylalanine--tRNA ligase alpha subunit (AHRD V3.3 *** A0A2G2XXC1_CAPAN) AT4G39280 Solyc02g090870.1 353 463 691 573 545 657 522 586 489 335 649 516 403 439 303 hypothetical protein (AHRD V3.3 *** AT5G67020.1) AT3G50340 Solyc02g090890.4 1533 1140 601 1192 1543 1344 1480 1332 898 1342 587 1063 788 683 919 zeaxanthin epoxidase AT5G67030 Solyc02g090900.3 201 342 349 392 417 445 524 493 430 249 408 270 247 235 305 Remorin (AHRD V3.3 *** A0A200QZA9_9MAGN) Solyc02g090910.3 1568 1450 972 1128 1072 1067 1185 1215 1021 1070 1102 1156 1339 1222 1002 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A2U1NV59_ARTAN) AT4G36960 Solyc02g090920.2 18 28 98 47 17 29 16 3 32 47 97 12 24 44 60 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4K4J2_ARATH) Solyc02g090930.3 359 805 1512 1037 378 458 511 353 1511 1369 1765 712 997 766 1089 Lipase (AHRD V3.3 *** A0A200QYW4_9MAGN) Solyc02g090940.3 0 4 0 12 1 3 1 0 0 1 0 0 1 0 12 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4K4J2_ARATH) Solyc02g090950.1 0 1 0 2 5 8 11 10 5 2 0 1 4 0 0 Transcription factor HEC2 (AHRD V3.3 *** A0A1U8FSU0_CAPAN) Solyc02g090960.1 45 441 343 414 413 614 459 416 353 198 434 372 192 302 109 Protein RALF-like 34 (AHRD V3.3 *** A0A2G2XHD5_CAPBA) AT5G67070 Solyc02g090970.1 55 42 119 3 0 0 0 0 18 83 226 40 24 46 57 MAP kinase kinase kinase 21 AT4G36950 Solyc02g090980.1 22 23 27 5 19 31 17 7 37 19 52 26 22 21 15 MAP kinase kinase kinase 22 AT4G36950 Solyc02g090990.1 10 12 187 13 13 10 22 6 34 29 13 7 14 35 4 MAP kinase kinase kinase 23 AT4G36950 Solyc02g091000.4 85 107 129 210 15 25 15 18 65 82 140 43 157 139 303 Late embryogenesis abundant protein (AHRD V3.3 *** A0A200QZD5_9MAGN) Solyc02g091010.1 14 3 38 19 1 5 13 13 16 6 28 10 5 16 19 nuclear pore complex protein NUP98A (AHRD V3.3 *-* A0A2I4ET44_9ROSI) Solyc02g091020.3 64 75 122 228 24 30 59 35 93 139 176 83 70 55 140 Nuclear pore complex protein NUP98A (AHRD V3.3 *-* A0A2G3AGI2_CAPAN) Solyc02g091030.4 1054 839 1812 1178 607 963 1008 741 923 872 1338 741 995 1446 1835 Nuclear transcription factor Y subunit C-2 (AHRD V3.3 *-* A0A2G3D858_CAPCH) Solyc02g091050.3 0 6 0 1 0 7 3 3 2 6 1 5 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A2U1NLL3_ARTAN) AT1G66760 Solyc02g091060.1 11 0 10 2 2 0 0 3 1 5 2 8 1 5 0 Unknown protein Solyc02g091070.3 7 6 8 5 5 6 0 2 6 7 12 5 13 7 19 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4EBU3_9ROSI) AT1G66760 Solyc02g091080.2 6 18 46 21 25 26 24 19 19 21 18 10 11 12 9 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4FHE6_9ROSI) Solyc02g091090.4 277 239 528 321 302 461 394 294 394 200 476 310 383 401 496 Valyl-tRNA synthetase (AHRD V3.3 *-* A0A2I0WPG5_9ASPA) Solyc02g091100.3 597 534 425 396 351 452 389 439 738 521 469 429 873 554 569 2-hydroxyacyl-CoA lyase (AHRD V3.3 *** A0A2G3D874_CAPCH) AT5G17380 Solyc02g091110.3 372 208 297 166 215 246 231 184 162 184 187 137 258 183 134 Histone chaperone (AHRD V3.3 *** A9TVI5_PHYPA) AT5G38110 Solyc02g091120.4 1296 862 950 1309 838 892 1034 857 1089 1291 827 910 675 1007 862 DNA ligase (AHRD V3.3 *** A0A2G3D842_CAPCH) AT1G66730 Solyc02g091130.3 22 37 25 38 38 75 81 79 29 22 27 32 15 43 45 ATP synthase subunit beta (AHRD V3.3 *** Q9ZR78_NICSY) AT5G08670 Solyc02g091140.3 11 4 34 13 12 14 2 15 7 9 1 1 17 8 66 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A1P8BFJ6_ARATH) AT1G15125 Solyc02g091150.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic (AHRD V3.3 *-* A0A2G3D868_CAPCH) Solyc02g091160.4 5 6 4 10 2 9 9 8 5 5 17 18 5 10 0 Integrin-linked protein kinase family (AHRD V3.3 *-* A0A2U1MDV9_ARTAN) Solyc02g091170.4 22 33 65 52 59 69 41 30 31 31 22 39 32 27 92 Serinethreonine-protein kinase ctr1 (AHRD V3.3 *** A0A1J6I8J0_NICAT) Solyc02g091180.1 38 29 76 0 0 1 4 0 0 2 232 23 15 7 67 DUF4228 domain-containing protein (AHRD V3.3 *** A0A1Q3D1C5_CEPFO) AT3G03280 Solyc02g091190.4 1631 1413 1615 1335 1445 1568 1479 1377 1389 1448 1478 1492 1476 1337 1408 Protein-lysine N-methyltransferase (AHRD V3.3 *** Q96347_BRANA) AT1G66680 Solyc02g091193.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g091197.1 40 34 17 13 44 22 20 38 29 24 19 26 22 24 10 Unknown protein Solyc02g091210.1 881 740 591 488 566 624 548 565 599 464 444 579 839 782 660 Eukaryotic translation initiation factor 5 (AHRD V3.3 *** A0A2G3D849_CAPCH) AT1G77840 Solyc02g091220.1 563 609 512 484 417 518 455 420 510 404 530 551 648 677 611 Eukaryotic translation initiation factor 5 (AHRD V3.3 *** A0A2G3D849_CAPCH) AT1G77840 Solyc02g091230.4 9 16 54 31 42 27 38 5 22 24 49 18 24 8 42 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1L1N1_ARTAN) Solyc02g091240.1 378 271 351 316 366 338 298 340 346 366 354 289 304 293 465 Auxin efflux carrier (AHRD V3.3 *** A0A2U1QP17_ARTAN) AT1G71090 Solyc02g091250.1 8 13 119 3 0 5 1 0 3 13 87 1 11 7 35 Mediator of RNA polymerase II transcription subunit (AHRD V3.3 *** Q9ZU37_ARATH) Solyc02g091260.1 4 2 4 0 4 1 2 0 2 4 1 0 2 3 0 Mediator of RNA polymerase II transcription subunit (AHRD V3.3 *** Q9ZU37_ARATH) AT2G01300 Solyc02g091270.3 1108 769 613 538 388 364 396 442 537 652 658 502 764 607 757 ELL-associated factor 1 (AHRD V3.3 *** A0A2I4GI96_9ROSI) AT1G71080 Solyc02g091280.3 1212 1563 1544 1315 1532 1430 1261 1549 1715 1310 1322 1588 1684 1711 1803 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A1U8FQ26_CAPAN) AT1G66670 Solyc02g091290.3 200 286 395 317 500 380 402 296 300 288 280 308 294 381 394 Methionyl-tRNA formyltransferase (AHRD V3.3 *** B4FRN6_MAIZE) AT1G66520 Solyc02g091300.3 13 25 22 14 13 5 7 11 16 11 25 2 4 14 21 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6PA46_ACTCH) AT5G17450 Solyc02g091310.2 8 19 20 38 88 96 58 81 30 23 55 40 4 20 1 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6QQR2_ACTCH) Solyc02g091320.4 204 245 279 183 239 272 252 299 237 186 213 186 249 298 224 glutamyl-tRNA (Gln) amidotransferase subunit C (AHRD V3.3 *** AT5G17460.5) AT5G17460 Solyc02g091330.4 625 454 523 463 513 532 504 530 483 440 532 533 497 557 587 AAR2 protein family (AHRD V3.3 *** A0A2U1KD81_ARTAN) AT1G66510 Solyc02g091340.4 1167 1307 1507 1485 1484 1358 1427 1390 1144 1182 1278 1129 1721 1457 1715 Pyridoxal kinase (AHRD V3.3 *** A0A2G3AAM2_CAPAN) AT5G37850 Solyc02g091350.4 372 520 622 694 872 917 913 868 404 486 458 365 571 542 363 Glycosyltransferase (AHRD V3.3 *** A0A2U1LPX5_ARTAN) Solyc02g091360.1 132 56 66 49 60 89 94 68 69 53 111 33 76 39 73 Plastid movement impaired (AHRD V3.3 *** A0A2P5E785_TREOI) AT1G66480 Solyc02g091370.2 160 36 52 58 72 73 68 108 41 71 54 79 47 88 12 Glycosyltransferase (AHRD V3.3 *** A0A2U1NU39_ARTAN) Solyc02g091380.1 494 117 57 39 5 19 13 9 23 63 65 15 129 88 19 transmembrane protein (AHRD V3.3 *** AT1G49000.1) Solyc02g091390.3 77 4 27 23 18 27 15 18 37 61 29 41 3 16 10 cold-regulated protein (AHRD V3.3 *** AT3G03341.1) AT3G03341 Solyc02g091400.1 7 26 11 32 3 8 10 14 5 30 0 3 0 6 0 leucine-rich repeat extensin-like protein 6 (AHRD V3.3 *** XP_010317274.1) Solyc02g091410.3 1567 1533 1227 1406 1452 1322 1504 1525 1535 1814 1344 1510 1525 1475 1363 Protease Do-like 7 (AHRD V3.3 *** A0A2G2XH23_CAPBA) AT3G03380 Solyc02g091420.3 0 1 11 0 0 0 2 0 0 0 0 0 0 0 0 NOD26-like intrinsic protein 4.1 AT5G37820 Solyc02g091430.4 1828 783 580 775 457 377 480 405 568 1276 583 622 720 751 1239 U-box domain-containing protein 4-like (AHRD V3.3 *** A0A2I4HV32_9ROSI) AT3G03440 Solyc02g091440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1N5T9_ARTAN) AT1G66470 Solyc02g091450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g091460.3 2494 2672 2019 1963 2291 2282 2188 2582 2011 2170 1647 2313 2818 2451 1817 Double-stranded RNA-binding (AHRD V3.3 *-* A0A2U1QNV9_ARTAN) Solyc02g091470.3 239 328 511 495 528 570 697 569 326 282 544 327 337 269 344 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1NMG2_ARTAN) AT5G37790 Solyc02g091480.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Polcalcin Bet v 4 (AHRD V3.3 *** A0A1U8FWM1_CAPAN) AT3G03430 Solyc02g091490.4 613 1437 1169 1143 1635 1543 1718 1672 1728 1275 1054 1210 1539 1134 810 fructokinase 3 AT1G66430 Solyc02g091500.1 450 298 1292 346 154 183 143 148 269 561 826 268 284 240 814 Calcium-dependent protein kinase (AHRD V3.3 *-* CDPK_DAUCA) AT1G66400 Solyc02g091510.3 2521 1707 1167 1484 861 1102 1203 1017 1289 1500 1297 1157 1574 1747 1329 GDP-L-galactose phosphorylase 1 (AHRD V3.3 *** A0A2G2XH67_CAPBA) Solyc02g091520.3 81 68 84 63 10 10 14 7 21 19 44 1 79 54 112 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LMA8_ARTAN) Solyc02g091530.4 254 220 326 213 241 269 247 249 254 240 238 208 215 229 281 Protein PTST, chloroplastic (AHRD V3.3 *** A0A1U8FYQ0_CAPAN) AT5G39790 Solyc02g091535.1 4 12 40 34 12 12 8 10 7 9 15 9 16 8 77 mRNA, clone: RTFL01-48-C04 (AHRD V3.3 *** E4MYC1_EUTHA) Solyc02g091550.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS box transcription factor AGAMOUS (AHRD V3.3 *** A0A1Q1NK16_PAELC) AT4G37940 Solyc02g091560.3 2691 3867 2708 2828 3462 3598 3463 3946 4626 3849 2809 2786 3316 2075 4544 Serine hydroxymethyltransferase (AHRD V3.3 *** A0A2G3D8E3_CAPCH) AT4G37930 Solyc02g091570.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G3B5C9_CAPCH) Solyc02g091580.4 1362 1975 1417 1327 1716 1505 1638 2169 1771 1887 1145 1763 2119 1721 1344 Oligopeptidase A (AHRD V3.3 *** A0A2U1NZK4_ARTAN) AT5G65620 Solyc02g091590.4 8 12 1 25 15 4 4 0 2 7 0 3 13 21 31 symbiosis receptor-like kinase (SYMRK) Solyc02g091600.1 9 53 36 61 52 62 48 70 19 54 43 22 37 21 37 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q9XII4_ARATH) AT2G16030 Solyc02g091620.3 83 28 25 36 11 30 12 9 39 29 40 14 19 32 6 MUTL protein homolog 3 (AHRD V3.3 *-* AT4G35520.6) Solyc02g091630.1 289 162 441 177 64 89 99 64 97 132 294 84 158 188 281 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc02g091640.3 630 637 618 499 445 415 492 324 467 350 490 529 601 739 588 Endoribonuclease E-like protein (AHRD V3.3 *** Q656E2_ORYSJ) AT4G37920 Solyc02g091650.4 178 84 101 73 73 41 56 31 87 146 97 81 146 111 75 Glycine-rich domain-containing protein 2 (AHRD V3.3 *** A0A2G2XGW0_CAPBA) AT2G22660 Solyc02g150148.1 293 212 234 207 237 221 259 218 227 189 362 193 152 258 273 Unknown protein Solyc02g091660.3 458 856 1323 1259 906 976 1196 1016 908 564 688 1144 580 1151 687 transcription factor GTE2-like (AHRD V3.3 *** A0A1S4DMM5_TOBAC) Solyc02g091665.1 3 3 5 1 1 6 10 7 1 1 16 0 0 3 0 Unknown protein Solyc02g091670.1 227 132 169 107 94 112 123 88 105 146 99 69 47 87 122 Octicosapeptide/Phox/Bem1p family protein (AHRD V3.3 *-* A0A1P8BCE3_ARATH) Solyc02g091680.4 194 290 275 369 391 377 437 410 441 252 310 396 294 369 416 Beta-D-xylosidase (AHRD V3.3 *** H1AC33_SOLLC) AT5G10560 Solyc02g091690.3 424 824 1201 851 3230 2260 2747 3043 821 710 776 1321 1686 757 383 bHLH transcription factor 081 Solyc02g091700.3 1090 534 1801 746 67 88 72 49 634 860 3028 435 1780 1552 1708 Hydroxyproline-rich glycoprotein (AHRD V3.3 *** A0A2K3L507_TRIPR) AT5G65660 Solyc02g091710.3 2357 1612 1474 1366 2470 2311 2147 2783 1448 1487 1302 1952 1832 1570 1341 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *** A0A2K3NFC1_TRIPR) Solyc02g091720.2 1566 1099 967 1017 821 863 806 851 915 1180 1130 860 1091 1056 1322 protein RMD5 homolog A (AHRD V3.3 *** A0A2I4DW83_9ROSI) AT4G37880 Solyc02g091725.1 229 158 59 151 177 76 71 98 92 181 89 122 109 87 92 Unknown protein Solyc02g091730.3 430 262 357 325 308 291 301 256 360 321 284 301 300 342 324 Chromatin SPT2 (AHRD V3.3 *** A0A2U1NKK8_ARTAN) AT2G22720 Solyc02g091750.3 3 0 4 4 2 1 1 3 8 2 12 24 0 3 13 LOW QUALITY PROTEIN: probable starch synthase 4, chloroplastic/amyloplastic (AHRD V3.3 *-* XP_025884911.1) Solyc02g091760.1 0 0 8 3 0 1 3 10 6 0 4 7 0 2 3 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* A9RQB7_PHYPA) Solyc02g091770.3 13 8 8 21 10 28 35 20 31 16 56 28 21 19 40 Starch synthase (AHRD V3.3 *-* A0A200QA36_9MAGN) Solyc02g091780.1 455 538 841 862 681 829 868 534 629 522 826 659 521 790 724 Kinesin-like protein (AHRD V3.3 *** A0A2G3AAZ8_CAPAN) AT3G49650 Solyc02g091790.3 778 988 952 784 1075 983 899 1212 949 921 731 1187 939 950 656 WD40 repeat (AHRD V3.3 *** A0A200R012_9MAGN) AT3G49660 Solyc02g091800.4 19 4 8 21 112 44 74 66 8 7 0 17 2 5 0 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1Q8Y8_ARTAN) Solyc02g091810.2 1 0 6 3 0 0 0 0 0 31 21 0 0 2 0 bHLH transcription factor 015 Solyc02g091820.3 0 2 35 0 0 0 0 0 0 2 39 3 0 0 0 bHLH transcription factor 016 Solyc02g091830.3 52 80 138 170 196 176 221 156 128 93 154 155 133 151 133 Phosphotransferase (AHRD V3.3 *** A0A1Q3D4W8_CEPFO) AT4G37840 Solyc02g091835.1 1 9 19 13 20 21 27 12 10 4 9 6 10 27 24 Unknown protein Solyc02g091840.3 5545 6829 7358 8270 9480 8639 8343 10838 9961 8483 9958 10982 7115 6639 6175 Leucine rich repeat receptor protein kinase CLAVATA1 (AHRD V3.3 *** F8WS84_SOLLC) AT5G65700 Solyc02g091850.1 6 43 82 68 103 93 58 66 34 26 35 37 73 74 84 Unknown protein Solyc02g091860.3 674 613 688 721 535 468 412 642 937 784 609 779 791 695 835 Receptor kinase (AHRD V3.3 *** D9IAP8_GOSHI) AT5G65710 Solyc02g091870.3 2 14 60 15 17 30 24 23 16 10 27 16 17 17 36 Tubulin alpha chain (AHRD V3.3 *** A0A2G2XH54_CAPBA) Solyc02g091880.4 712 1432 1610 1299 1492 1586 1571 1367 1130 986 1434 1155 1949 1285 1134 Cytochrome c oxidase subunit 6a, mitochondrial (AHRD V3.3 *** A0A1U8FNT4_CAPAN) AT4G37830 Solyc02g091890.3 836 2319 1643 1438 2479 2995 2421 2696 2805 1384 2125 1842 1611 1455 2475 myb-like protein X (AHRD V3.3 *-* A0A2I4FW88_9ROSI) Solyc02g091900.4 1341 1603 1533 1138 1404 1276 1135 1394 1391 1218 1133 1214 1811 1513 1098 Cysteine desulfurase IscS (AHRD V3.3 *** E3QE34_COLGM) AT5G65720 Solyc02g091910.2 16 39 30 41 196 176 169 148 32 32 59 57 15 29 11 EPIDERMAL PATTERNING FACTOR-like protein 2 (AHRD V3.3 *** A0A2I4HW41_9ROSI),Pfam:PF17181 Solyc02g091920.3 500 1048 685 911 535 522 394 448 1130 837 874 997 712 303 546 xyloglucan endotransglucosylase-hydrolase 7 AT4G37800 Solyc02g091930.3 1989 1292 947 1332 1495 1310 1386 1107 1252 1153 911 777 1454 1406 2489 Homeobox-leucine zipper protein HOX27 (AHRD V3.3 *** A0A2G3D8F8_CAPCH) AT4G37790 Solyc02g091940.3 785 588 719 592 596 570 515 494 520 701 553 498 671 564 752 hypothetical protein (AHRD V3.3 *** AT5G13310.2) AT5G13970 Solyc02g091950.4 506 487 659 602 461 555 564 611 742 798 675 806 677 673 648 Lysosomal Pro-X carboxypeptidase (AHRD V3.3 *** A0A1J3CNY8_NOCCA) AT5G65760 Solyc02g091960.4 1230 1130 1277 1142 1229 1324 1273 1320 1335 1052 1247 1166 1047 1183 1267 Protein CROWDED NUCLEI 4 (AHRD V3.3 *-* A0A2G2XHM1_CAPBA) Solyc02g091970.4 864 1221 999 1042 1464 1491 1479 1650 822 988 912 1064 1117 1038 882 SlBCAT3 AT3G49680 Solyc02g091980.2 76 82 87 58 172 160 145 110 64 49 72 95 84 54 123 blind-like7 Solyc02g091985.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc02g091990.3 0 28 6 2 0 0 0 0 3 2 13 8 2 1 11 1-aminocyclopropane-1-carboxylate synthase 3 AT4G37770 Solyc02g092000.3 116 432 711 342 443 486 458 402 404 448 580 297 408 279 336 transmembrane protein (AHRD V3.3 *** AT3G49720.3) Solyc02g092010.4 1501 1167 1167 1424 1024 1195 1159 1040 1182 1204 1155 1139 1158 1368 1382 GTP-binding protein, chloroplastic (AHRD V3.3 *** A0A2G3D8K8_CAPCH) AT3G49725 Solyc02g092020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 F-box protein SKIP23-like (AHRD V3.3 *** A0A2I4GFL5_9ROSI) Solyc02g092030.3 13 8 12 3 14 15 1 1 2 9 19 11 4 3 25 DUF21 domain-containing protein (AHRD V3.3 *** A0A2G2XH89_CAPBA) Solyc02g092040.1 354 448 485 494 511 527 517 625 461 492 455 449 487 546 480 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3PDB7_TRIPR) AT3G49750 Solyc02g092050.3 453 1047 1334 1359 1079 1267 1018 1113 1033 1035 861 1521 808 1501 1032 AP2-like ethylene-responsive transcription factor PLT2 (AHRD V3.3 *** A0A2G3D8I7_CAPCH) AT4G37750 Solyc02g092060.1 4 0 0 0 0 3 0 2 0 0 0 2 0 3 5 Short-chain dehydrogenase/reductase SDR (AHRD V3.3 *** A0A200PSI1_9MAGN) Solyc02g092070.3 519 518 651 764 860 909 839 771 277 449 465 611 554 828 443 Growth-regulating factor 8 (AHRD V3.3 *** A0A2G3AB32_CAPAN) AT4G37740 Solyc02g092075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g092080.2 141 155 170 170 138 192 146 123 85 93 131 147 247 218 196 60S ribosomal protein L23A (AHRD V3.3 *** A0A2G2XH92_CAPBA) Solyc02g092090.3 446 156 185 91 96 112 79 114 69 136 139 68 177 162 429 basic leucine zipper 43-like (AHRD V3.3 *** A0A2I4G035_9ROSI) AT4G37730 Solyc02g092100.1 0 5 2 2 0 2 2 3 1 0 3 0 2 0 13 hypothetical protein (AHRD V3.3 --* AT4G10810.1) Solyc02g092110.3 233 245 96 190 73 66 76 54 253 49 66 41 203 261 179 Phytosulfokines 3 (AHRD V3.3 *** A0A2I0WHI7_9ASPA) AT3G49780 Solyc02g092120.3 15 9 3 0 0 1 0 1 25 10 46 3 1 6 17 phytosulfokines-like (AHRD V3.3 *** A0A2I4HMI7_9ROSI) AT3G49780 Solyc02g092130.2 199 251 402 313 274 334 355 230 236 220 306 262 335 326 444 Unknown protein AT5G65880 Solyc02g092140.1 154 35 32 34 4 2 17 7 26 61 46 36 13 41 73 PHLOEM 2-LIKE A10 protein (AHRD V3.3 *** A0A2K3MSF3_TRIPR) Solyc02g092150.3 331 314 96 167 284 269 318 318 194 283 66 90 245 96 171 ACT domain-containing protein (AHRD V3.3 *** A0A1Q3APQ4_CEPFO) AT5G65890 Solyc02g092160.3 2483 1295 1636 1375 1302 1199 1147 1308 1588 2209 1959 1570 1293 1111 1498 BSD domain-containing protein (AHRD V3.3 *** A0A1Q3AQ21_CEPFO) AT5G65910 Solyc02g092170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4DG52_9ROSI) Solyc02g092180.1 4 2 11 0 0 0 2 0 0 0 2 1 0 0 0 Uncharacterized conserved protein UCP031279 (AHRD V3.3 --* AT1G58420.1) Solyc02g092190.1 6 8 23 10 2 6 2 7 9 1 5 21 8 9 8 hypothetical protein (AHRD V3.3 -** AT5G65925.1) Solyc02g092200.3 65 104 94 55 58 64 56 41 58 35 49 63 106 73 36 hypothetical protein (AHRD V3.3 *-* AT5G67640.1) AT5G67640 Solyc02g092210.1 163 120 99 88 114 101 51 137 75 94 59 51 92 81 93 Galactosyl transferase GMA12/MNN10 family protein (AHRD V3.3 *** A0A2U1NY56_ARTAN) Solyc02g092220.1 7 38 40 44 53 80 58 55 45 19 84 36 44 44 69 Unknown protein Solyc02g092225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g092230.3 360 285 450 357 506 423 427 485 359 550 393 438 378 335 503 Heptahelical transmembrane protein ADIPOR3 (AHRD V3.3 *** A0A2G2XHA2_CAPBA) AT4G37680 Solyc02g092240.3 238 150 198 141 225 163 192 197 158 230 147 168 190 162 190 D-ribose-binding periplasmic protein (AHRD V3.3 *** AT5G50090.2) AT5G67620 Solyc02g092250.3 160 171 155 202 148 99 76 95 217 230 216 170 198 163 160 Cytochrome (AHRD V3.3 *** A0A2G3ABE0_CAPAN) Solyc02g092260.3 905 674 725 625 609 665 626 571 684 835 781 801 756 803 768 Amino-acid acetyltransferase-like protein (AHRD V3.3 *** A0A2K3MR62_TRIPR) AT2G22910 Solyc02g092270.3 2165 2558 3506 2981 3408 2992 3066 2630 2776 2073 3633 2736 2716 2613 3516 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (AHRD V3.3 *** A0A1U8FNY1_CAPAN) AT5G67590 Solyc02g092280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L2 (AHRD V3.3 *-* A0A290WL33_SOLLC) Solyc02g092290.4 432 378 452 447 364 298 341 335 465 429 327 584 438 535 332 F-box/RNI-like superfamily protein (AHRD V3.3 *** F4KDV0_ARATH) AT1G78760 Solyc02g092300.1 242 513 280 304 373 406 353 298 304 202 294 305 437 418 179 50S ribosomal protein L7/L12 (AHRD V3.3 *** A0A1U8FNY5_CAPAN) AT4G37660 Solyc02g092310.4 881 490 462 480 343 383 491 356 346 328 382 322 298 456 472 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2XHA6_CAPBA) AT5G67570 Solyc02g092320.2 718 503 274 283 384 250 267 359 258 514 211 332 245 362 184 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A2G2XHA6_CAPBA) Solyc02g092330.3 360 328 320 290 382 324 378 374 331 331 346 343 311 297 438 ADP-ribosylation factor-like protein 8B (AHRD V3.3 *** A0A1U8FNY6_CAPAN) AT3G49870 Solyc02g092340.2 9 11 3 4 0 5 3 1 3 5 2 2 18 5 11 Transmembrane protein (AHRD V3.3 *-* Q1PDF2_ARATH) Solyc02g092350.3 22 6 51 41 15 30 29 15 10 20 26 11 33 41 61 Transmembrane protein (AHRD V3.3 *** Q1PDF2_ARATH) AT5G67550 Solyc02g092360.3 464 457 472 490 543 460 478 511 583 533 442 544 505 458 569 Glycosyl hydrolase family protein 43 (AHRD V3.3 *** A0A2U1PKN1_ARTAN) AT3G49880 Solyc02g092370.1 259 862 705 1283 1657 1375 1327 1767 1077 582 566 731 832 1007 639 Transcription factor GRAS (AHRD V3.3 *** A0A200QN05_9MAGN) AT4G37650 Solyc02g092375.1 1 0 0 3 3 1 7 1 3 1 0 0 0 4 4 Unknown protein Solyc02g092380.4 764 818 737 658 754 758 813 827 833 682 601 810 799 776 585 Peptidyl-prolyl cis-trans isomerase-like protein (AHRD V3.3 *** G5DVV0_SILLA) AT5G67530 Solyc02g092390.3 213 285 348 236 394 378 284 257 228 236 270 245 269 314 298 hypothetical protein (AHRD V3.3 *** AT3G49890.1) AT3G49890 Solyc02g092400.1 1 0 2 0 3 0 1 0 1 1 0 0 6 5 0 Late embryogenesis abundant protein (AHRD V3.3 *** A0A200R0G4_9MAGN) Solyc02g092410.3 32 19 40 35 106 108 66 83 89 55 44 104 37 29 35 Adenylyl-sulfate kinase (AHRD V3.3 *** A0A1U8FYZ5_CAPAN) AT2G14750 Solyc02g092420.4 170 173 258 265 262 275 226 259 209 173 187 267 162 157 118 Phototropic-responsive NPH3 family protein (AHRD V3.3 *-* A0A2U1NGE5_ARTAN) AT3G49900 Solyc02g092430.1 2849 6464 5373 3805 5660 5990 5693 5374 3521 2881 4132 4076 6922 5152 4619 60S ribosomal protein L26 (AHRD V3.3 *** A0A1U8FHZ3_CAPAN) AT3G49910 Solyc02g092440.3 3448 3336 3565 3929 2793 2742 2978 2537 2479 2884 3430 2639 4037 4153 3379 Mitochondrial outer membrane protein porin 2 (AHRD V3.3 *** A0A1U8FWW1_CAPAN) AT5G67500 Solyc02g092450.3 111 121 483 233 86 154 93 104 104 289 348 49 169 167 100 Calcium-transporting ATPase (AHRD V3.3 *** A0A2G2XH12_CAPBA) AT4G37640 Solyc02g092460.3 6 25 17 35 31 45 28 32 43 25 36 20 28 24 39 BTB/POZ and TAZ domain-containing protein 4 (AHRD V3.3 *** A0A2G2XGZ7_CAPBA) AT5G67480 Solyc02g092470.3 1685 1745 1821 1969 2253 1917 2003 2265 2415 2194 2125 1666 1944 2135 2646 Formin-like protein (AHRD V3.3 *** A0A2G3D8M5_CAPCH) AT5G67470 Solyc02g092475.1 12 18 16 12 53 18 13 33 35 14 25 7 7 17 20 Unknown protein Solyc02g092480.4 1262 1868 2646 2276 2481 3297 2904 2774 2825 1333 2584 2201 1921 2922 2363 BTB domain-containing protein/NPH3 domain-containing protein (AHRD V3.3 *** A0A1Q3ASI0_CEPFO) AT2G14820 Solyc02g092490.3 373 603 471 462 649 755 652 840 858 626 642 1300 436 565 259 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** A0A1P8B3D5_ARATH) AT4G37580 Solyc02g092500.1 0 4 0 3 2 2 3 2 2 0 0 3 5 1 0 Unknown protein Solyc02g092510.3 122 305 312 182 249 245 296 258 206 141 164 209 302 274 95 Queuosine salvage protein (AHRD V3.3 *** A0A2G3D8Q6_CAPCH) Solyc02g150149.1 6 6 0 9 2 0 6 10 1 12 1 10 1 6 0 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G2XFY3_CAPBA) Solyc02g092520.3 56 39 14 17 27 11 26 25 18 53 46 37 21 36 6 DNA mismatch repair protein MLH3 isoform X1 (AHRD V3.3 --* XP_010316472.1) Solyc02g092525.1 62 56 15 55 14 32 48 35 42 51 53 59 18 30 62 DNA mismatch repair protein MLH3 (AHRD V3.3 *-* A0A2G3D769_CAPCH) Solyc02g092530.4 1201 1048 418 982 631 650 855 582 643 631 354 385 1283 746 897 Acetamidase/Formamidase (AHRD V3.3 *** A0A200R348_9MAGN) AT4G37560 Solyc02g092540.2 56 79 66 86 54 49 54 44 39 60 75 41 65 62 77 Unknown protein Solyc02g092550.3 416 403 395 220 954 749 840 707 266 230 368 141 553 360 244 LOB domain-containing protein 38 (AHRD V3.3 *** A0A2G2XGY4_CAPBA) AT5G67420 Solyc02g092560.3 1085 667 594 634 915 971 1005 818 822 680 769 594 586 653 835 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2XGY8_CAPBA) AT5G67385 Solyc02g092570.1 11 8 0 7 5 21 5 16 8 8 3 15 5 5 3 Transcription factor GRAS (AHRD V3.3 *** A0A200R352_9MAGN) AT3G49950 Solyc02g092580.3 274 105 123 258 11 12 4 12 199 414 451 18 77 106 308 Peroxidase (AHRD V3.3 *** K4BD54_SOLLC) AT4G37530 Solyc02g092590.3 1520 920 638 986 845 963 968 618 809 1105 678 449 725 965 1227 glycosyltransferase-like protein (AHRD V3.3 *-* AT5G67390.3) AT5G67390 Solyc02g092600.3 566 225 351 256 104 134 156 52 147 161 312 130 156 181 417 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A1U8FWX7_CAPAN) Solyc02g092610.3 223 84 156 119 26 57 45 37 64 62 119 80 28 74 96 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A1U8FWX7_CAPAN) Solyc02g092620.3 704 294 258 251 105 119 99 81 166 244 186 187 155 262 214 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A2G3D5A4_CAPCH) Solyc02g092640.4 1807 1859 2549 2386 2320 2490 2413 2371 2396 2104 2517 2314 2198 2355 2541 Protein kinase domain (AHRD V3.3 *** A0A200R2Z4_9MAGN) AT5G67380 Solyc02g092650.3 351 154 168 138 116 114 120 95 138 192 148 100 188 162 172 Unknown protein Solyc02g092660.3 144 160 335 262 302 451 421 329 249 223 351 278 200 235 267 Major facilitator superfamily protein (AHRD V3.3 *** Q8GXH4_ARATH) AT2G23093 Solyc02g092670.1 346 573 606 418 438 528 430 542 598 491 641 422 338 292 248 Subtilisin-like protease (AHRD V3.3 *** A9XG40_TOBAC) AT5G67360 Solyc02g092680.1 2 3 15 0 10 14 9 23 1 9 4 12 1 0 1 Subtilisin-like protease (AHRD V3.3 *** A9XG40_TOBAC) Solyc02g092690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g092700.3 1218 892 190 593 1045 927 849 861 661 980 148 487 711 206 253 DUF1230 family protein (DUF1230) (AHRD V3.3 *** AT5G67370.1) AT5G67370 Solyc02g092710.3 382 412 458 354 543 501 440 548 440 338 330 450 431 393 281 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1KVM6_ARTAN) AT4G33910 Solyc02g092720.1 75 191 191 195 101 136 118 146 188 116 179 116 189 118 198 hypothetical protein (AHRD V3.3 *** AT5G67350.1) AT5G67350 Solyc02g092730.4 130 101 126 198 140 171 184 132 109 157 226 132 124 111 76 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (AHRD V3.3 *** A0A2G3ACT7_CAPAN) Solyc02g092740.1 36 35 22 49 36 51 37 29 40 29 24 53 66 21 27 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (AHRD V3.3 *-* A0A2G3D9X4_CAPCH) Solyc02g092750.3 821 388 346 258 60 65 77 49 195 400 366 121 567 418 377 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1MLG3_ARTAN) Solyc02g092760.3 156 128 140 86 25 21 18 23 40 124 227 24 144 72 68 Sigma-B regulation protein RsbQ (AHRD V3.3 *** A0A2T0KZ78_9BURK) Solyc02g092770.3 48 64 120 76 26 27 16 11 90 89 51 41 84 87 60 Sigma-B regulation protein RsbQ (AHRD V3.3 *** A0A2V2Z439_9BACL) AT4G37470 Solyc02g092780.3 1787 1156 1394 1186 649 852 793 798 1129 1160 1606 942 1087 1128 1269 Suppressor of RPS4-RLD 1 (AHRD V3.3 *** A0A2G3D548_CAPCH) AT4G37460 Solyc02g092783.1 11 3 1 2 1 4 0 0 12 11 4 7 7 9 12 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein (AHRD V3.3 *** A0A1P8BFL1_ARATH) Solyc02g092790.3 1909 11571 12021 7652 8589 6932 7744 8320 9625 7920 15620 6692 4971 3991 3965 Arabinogalactan (AHRD V3.3 *-* Q43719_SOLLC) AT4G37450 Solyc02g092800.3 1199 1144 1448 1307 1209 1280 1273 1347 1042 1027 1075 1088 1248 1252 1172 metal transporter AY196092 AT2G23150 Solyc02g092810.4 171 195 348 336 271 238 210 208 171 153 221 134 210 235 239 RING/U-box superfamily protein (AHRD V3.3 *-* B3H489_ARATH) AT4G24204 Solyc02g092820.4 1613 1567 2051 1362 3953 3270 2493 4695 1851 2522 1561 3052 203 665 244 IAA-amido synthetase 3-4 Solyc02g092830.4 279 529 395 360 482 418 426 406 231 281 343 395 490 430 396 hypothetical protein (AHRD V3.3 --* AT4G17310.9) Solyc02g092840.1 448 842 582 770 803 774 664 781 963 1063 944 654 777 630 925 Xyloglucan galactosyltransferase KATAMARI1 (AHRD V3.3 *** A0A2K3L4H3_TRIPR) Solyc02g092845.1 37 74 201 121 90 125 136 48 71 56 196 43 155 86 186 Unknown protein Solyc02g092850.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *-* A0A2K3PKD0_TRIPR) Solyc02g092860.3 821 382 207 249 92 58 45 82 244 828 235 208 442 279 151 Cytochrome P450 (AHRD V3.3 *** Q9XFX1_CICAR) AT4G37360 Solyc02g092870.2 56 46 22 36 35 20 19 14 19 26 29 13 70 45 8 Nucleolar-like protein (AHRD V3.3 *** F4J3H8_ARATH) AT3G01810 Solyc02g092880.3 176 149 90 171 96 93 59 75 50 140 117 51 248 148 143 Maternal effect embryo arrest 59 (AHRD V3.3 *** A0A2U1M4C6_ARTAN) AT4G37300 Solyc02g092890.1 1 4 1 1 0 0 1 0 3 2 18 7 3 12 2 GPI-anchored CFEM domain protein ARB_01545-like isoform X2 (AHRD V3.3 *-* XP_021803343.1) AT4G37290 Solyc02g092910.3 596 629 674 577 523 571 644 606 514 431 511 539 602 709 512 Mortality factor 4-like protein 1 (AHRD V3.3 *** A0A1J3DXD1_NOCCA) AT4G37280 Solyc02g092920.4 2036 2151 3417 3276 2228 2195 2271 2413 2206 2292 1850 1994 1860 2063 1946 Heavy metal atpase 1 (AHRD V3.3 *** A0A2U1LYE0_ARTAN) AT4G37270 Solyc02g092930.1 5001 3541 5815 2931 2547 3183 2747 1650 4073 3883 10532 3916 4232 2753 4219 R2R3MYB transcription factor 44 AT5G67300 Solyc02g092940.3 1160 2119 2081 2025 2973 2729 3058 2667 2844 1540 1901 1869 2142 1883 1241 Receptor protein kinase-like protein (AHRD V3.3 *** W9RY70_9ROSA) AT2G23300 Solyc02g092950.3 373 671 790 853 1252 1133 1174 1254 703 591 789 976 309 609 444 Microtubule-associated protein RP/EB family member 1C (AHRD V3.3 *** A0A2G2XGZ8_CAPBA) AT5G67270 Solyc02g092960.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 -** AT5G67265.1) AT5G67265 Solyc02g092970.3 8 11 10 8 0 2 0 0 0 1 13 5 5 16 33 ADP-ribosylation factor (AHRD V3.3 *** A0A2U1LV56_ARTAN) Solyc02g092980.3 726 2175 3340 3302 4207 5277 5337 3696 2119 1768 3708 3182 981 2084 1523 cyclin D3.1 AT5G67260 Solyc02g092990.1 556 429 412 379 346 367 339 382 422 422 564 458 389 400 499 F-box protein (AHRD V3.3 *** A0A2G2XGV7_CAPBA) Solyc02g093000.3 656 1052 853 975 1172 1102 1149 1440 1587 1008 991 1178 917 1032 807 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like (AHRD V3.3 *** A0A2I4GM96_9ROSI) Solyc02g093010.3 1030 1003 1033 1099 984 1034 976 1016 946 1108 994 1116 1051 1176 1255 Protein RER1 (AHRD V3.3 *** A0A2G3D8A3_CAPCH) Solyc02g093020.3 414 268 398 239 232 177 149 152 296 406 598 145 420 280 201 Transmembrane protein, putative (DUF247) (AHRD V3.3 *** Q9SN06_ARATH) AT3G50120 Solyc02g093030.3 235 250 352 320 401 357 404 277 282 228 267 254 308 369 457 Peptidyl-tRNA hydrolase family protein (AHRD V3.3 *** A0A2U1QDH3_ARTAN) AT5G19830 Solyc02g093040.4 91 120 84 52 127 145 124 180 167 74 139 79 136 94 75 Cysteine proteinase RD21a (AHRD V3.3 *** A0A2G2XHR6_CAPBA) Solyc02g093050.3 1035 1188 1337 1314 1459 1451 1340 1537 1276 1248 1247 1313 1149 992 1038 WRKY transcription factor 8 AT4G24240 Solyc02g093060.3 1216 1236 1191 1327 1210 1288 1302 1103 1136 1086 1283 1285 1143 1305 1292 tRNA-dihydrouridine synthase (AHRD V3.3 *** A0A2G3D8C2_CAPCH) AT5G67220 Solyc02g093070.3 0 90 246 121 1170 1412 1844 1297 136 47 130 484 24 242 13 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1Q3D7_ARTAN) AT3G50210 Solyc02g093080.3 1558 945 1069 1224 1143 1201 1196 978 1244 1083 1543 1379 825 1027 1346 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1Q3D7_ARTAN) AT3G50210 Solyc02g093090.1 14 31 14 42 29 44 21 26 22 34 15 38 46 21 68 Glucuronoxylan 4-o-methyltransferase 1-like protein (AHRD V3.3 *** A0A2K3MTC9_TRIPR) AT5G67210 Solyc02g093100.3 1155 1501 1795 1621 2050 2158 1893 2038 1595 1371 1737 1670 1539 1218 1004 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A2U1N4I0_ARTAN) AT5G67200 Solyc02g093110.3 868 888 1778 1430 767 830 941 820 961 1156 1358 956 1291 964 1208 Ubiquitin-conjugating enzyme (AHRD V3.3 *** B3TLZ3_ELAGV) AT3G57870 Solyc02g093120.4 1857 1255 1067 1276 1345 786 963 1090 927 1403 1033 1246 1118 978 1041 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A2U1L4A5_ARTAN) AT2G42240 Solyc02g093130.3 616 471 405 406 454 536 448 428 476 467 508 340 390 393 728 Ethylene-responsive transcription factor RAP2-10 (AHRD V3.3 *** A0A2G2XHS4_CAPBA) Solyc02g093140.4 480 448 426 556 353 329 312 334 360 575 379 408 427 445 458 CBS domain-containing protein CBSX1, chloroplastic (AHRD V3.3 *** A0A1U8FZ99_CAPAN) AT4G36910 Solyc02g093150.3 299 549 353 747 763 778 874 633 561 387 384 366 686 579 476 APETALA2c AT4G36920 Solyc02g093160.3 563 762 954 736 766 824 857 823 941 825 1054 710 1023 858 930 Filament-like plant protein 7 (AHRD V3.3 *** A0A314L8W3_NICAT) AT2G23360 Solyc02g093170.4 264 475 462 535 523 544 612 441 405 325 532 461 509 588 607 Cyclin delta-3 (AHRD V3.3 *** F4JJY7_ARATH) AT4G34090 Solyc02g093180.3 197 690 206 169 523 755 464 591 831 766 427 885 510 362 132 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2K3L8P7_TRIPR) AT5G67150 Solyc02g093190.3 303 407 385 465 466 535 585 541 530 439 375 436 261 449 422 Histone-lysine N-methyltransferase (AHRD V3.3 *-* Q76I95_PETHY) Solyc02g093195.1 80 100 99 155 73 119 117 64 103 82 135 96 73 110 134 Unknown protein Solyc02g093210.3 349 874 886 878 1119 1107 1137 1090 917 630 876 826 788 885 1045 PI-PLC X domain-containing protein (AHRD V3.3 *** A0A2G3A7Y6_CAPAN) AT5G67130 Solyc02g093220.3 453 400 1290 1193 398 555 448 440 361 385 285 374 313 223 221 F-box protein (AHRD V3.3 *** A0A2G2V3N1_CAPBA) AT5G67140 Solyc02g093230.4 20 29 95 49 33 75 45 27 52 14 52 54 31 13 26 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A1U8FPA5_CAPAN) AT4G34050 Solyc02g093240.3 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** J9XVA1_TOBAC) Solyc02g093250.3 56 50 57 37 35 65 59 73 65 48 74 75 55 47 76 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A1U8FPA5_CAPAN) AT4G34050 Solyc02g093270.4 627 344 308 305 112 125 109 142 701 367 461 248 350 595 1183 caffeoyl-CoA O-methyltransferase AT4G34050 Solyc02g093280.2 141 563 383 473 605 554 417 722 578 214 387 496 277 644 301 bHLH transcription factor 017 AT4G36930 Solyc02g093285.1 1 0 1 1 1 1 1 5 0 0 0 0 2 4 0 Unknown protein Solyc02g093290.3 1125 1023 840 922 784 891 869 780 822 776 898 656 1304 1023 966 Nicotinate phosphoribosyltransferase (AHRD V3.3 *** A0A2G3D572_CAPCH) AT2G23420 Solyc02g093300.3 145 1241 1067 1093 1744 1726 1852 2176 1530 934 746 1558 677 1312 396 DNA polymerase (AHRD V3.3 *** H9E8V2_SOLLC) AT5G67100 Solyc02g093310.3 56 226 201 232 280 207 278 269 284 261 399 317 239 237 316 PI-PLC X domain-containing protein (AHRD V3.3 *** A0A2G2XHF5_CAPBA) AT4G36945 Solyc02g093320.4 944 549 649 828 729 683 870 718 712 598 630 631 562 659 494 DNA mismatch repair protein MLH3 isoform X1 (AHRD V3.3 *-* XP_010316472.1) Solyc02g093330.4 159 178 310 470 186 78 152 68 98 176 214 76 158 240 277 nuclear pore complex protein NUP98A (AHRD V3.3 *-* A0A2I4ET44_9ROSI) Solyc02g093340.3 1528 2259 1716 1214 1887 1738 1522 2018 1766 1518 1029 1582 2375 2127 1270 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* Q9FM47_ARATH) AT5G40490 Solyc02g093350.3 250 351 290 274 343 290 337 386 384 416 246 443 303 392 361 hypothetical protein (AHRD V3.3 *** AT5G40500.1) AT5G40500 Solyc02g093360.3 653 864 622 935 1487 1306 1208 1289 978 768 1079 669 568 825 1245 Stpk1 protein kinase (AHRD V3.3 *** Q41493_SOLTU) AT3G27580 Solyc02g093370.2 2771 1766 1656 1461 1315 1321 1258 1176 1547 1335 1393 1229 1782 1637 2617 altered inheritance of mitochondria protein 32-like (AHRD V3.3 *** A0A2I4HUQ2_9ROSI) AT5G40510 Solyc02g093380.1 34 52 25 23 39 41 25 39 14 22 57 12 53 51 58 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1PB47_ARTAN) AT3G01580 Solyc02g093390.4 474 464 492 416 529 536 437 424 455 335 394 395 632 581 458 Ribosomal RNA-processing protein 8 (AHRD V3.3 *** A0A2G2XHZ4_CAPBA) AT5G40530 Solyc02g093400.3 72 182 225 246 353 324 452 322 160 170 192 209 188 331 137 Integral membrane protein MviN (AHRD V3.3 *-* A0A1Y1IAL8_KLENI) Solyc02g093410.4 2269 1295 1520 1495 979 1089 1087 962 2019 2215 2414 1563 1342 1109 1713 MAP kinase kinase kinase 24 AT5G50180 Solyc02g093420.4 585 418 528 318 157 263 212 220 288 591 429 267 777 344 234 NAC domain-containing protein 10 (AHRD V3.3 *** A0A2G3ACK5_CAPAN) Solyc02g093430.3 452 408 355 342 216 283 266 192 360 575 1179 362 552 460 344 Beta-1,4-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** Q9LT58_ARATH) AT3G27540 Solyc02g093440.4 1144 844 839 934 777 879 853 825 864 871 1094 775 741 807 795 Glucuronokinase 1 (AHRD V3.3 *** A0A1J3JMA3_NOCCA) AT3G01640 Solyc02g093450.3 442 434 431 365 512 444 402 491 409 491 283 440 482 476 414 cryptic loci regulator (AHRD V3.3 *** AT3G27520.1) AT3G27520 Solyc02g093460.4 390 440 383 568 317 325 325 374 393 445 304 365 339 447 533 tRNA pseudouridine synthase B (AHRD V3.3 *** A0A1J3DSQ2_NOCCA) AT5G14460 Solyc02g093470.4 985 868 819 731 762 648 628 762 1040 1005 841 829 1149 1104 684 Lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** A0A1P8AMP7_ARATH) AT1G67850 Solyc02g093480.4 69 71 161 117 108 117 101 83 97 133 108 115 78 71 58 Lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** A0A1I9LSL9_ARATH) Solyc02g093490.3 656 503 693 524 466 498 552 463 616 536 639 701 593 551 737 SGF29 tudor-like domain-containing protein (AHRD V3.3 *** A0A2U1MEF8_ARTAN) AT3G27460 Solyc02g093500.4 34 30 127 56 109 117 95 48 53 73 108 24 86 47 154 Gdsl esterase/lipase (AHRD V3.3 *** A0A2P4LYH6_QUESU) Solyc02g093510.3 500 864 911 558 788 857 749 665 649 367 922 612 985 826 814 Surfeit locus protein 2 (SURF2) (AHRD V3.3 *** Q9LY85_ARATH),Pfam:PF05477 AT5G14440 Solyc02g093520.3 1481 1670 1799 1968 1460 1284 1373 1598 1837 2155 1669 1553 1877 1546 1552 E3 ubiquitin-protein ligase RGLG2-like (AHRD V3.3 *** A0A2I4E6G4_9ROSI) AT5G14420 Solyc02g093525.1 91 150 215 179 169 216 194 146 117 97 183 135 143 118 191 hypothetical protein (AHRD V3.3 *** AT5G14410.1) AT5G14410 Solyc02g093530.4 1236 850 857 732 920 841 828 963 906 1121 881 992 939 799 578 Rab family GTPase (AHRD V3.3 *** A0A1Y1I8A7_KLENI) AT4G35860 Solyc02g093540.4 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200R4J4_9MAGN) Solyc02g093545.1 10 4 0 3 0 0 0 1 1 1 0 0 4 0 2 CytochromeB1 (AHRD V3.3 *-* A0A2G3ACJ7_CAPAN) Solyc02g093550.3 38 92 94 111 122 68 106 125 84 61 76 45 84 74 92 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MAR1_ARTAN) AT3G01660 Solyc02g093580.4 0 5 10 3 2 9 12 9 147 12 0 46 1 7 57 Tomato 9612 mRNA Solyc02g093590.3 367 695 1297 783 1375 1530 1460 1316 1512 582 1805 1428 620 1226 1737 zinc finger protein CONSTANS-LIKE 16-like (AHRD V3.3 *** A0A2I4E4H9_9ROSI) AT5G14370 Solyc02g093600.3 49 13 38 46 25 23 23 17 77 39 99 54 52 59 92 Class I heat shock protein (AHRD V3.3 *** A0A2K3K1J3_TRIPR) Solyc02g093610.3 85 159 151 338 115 121 97 48 469 153 252 109 215 393 351 BAG family molecular chaperone regulator 2-like (AHRD V3.3 *** A0A2I4HMN0_9ROSI) AT5G14360 Solyc02g093620.2 703 584 335 465 717 651 585 740 608 626 286 444 458 380 485 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3D9X8_CAPCH) AT3G46610 Solyc02g093630.3 3193 2611 2832 2550 2331 2194 2161 2181 2777 3414 3125 3174 2966 2785 2380 Transmembrane protein (AHRD V3.3 *** Q84K38_ARATH) AT5G40640 Solyc02g093640.3 700 1184 959 898 936 978 856 973 1045 882 873 816 1270 1135 754 Very-long-chain 3-oxoacyl-CoA reductase (AHRD V3.3 *** A0A2U1QI70_ARTAN) AT1G67730 Solyc02g093650.4 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 Early nodulin-like protein 1-like (AHRD V3.3 *** A0A2K3MHR5_TRIPR) AT5G14345 Solyc02g093660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g093670.3 2 2 0 0 0 0 1 0 3 0 2 0 3 0 0 RPM1-interacting protein 4-like (AHRD V3.3 *** A0A2I4E4J5_9ROSI) AT5G40645 Solyc02g093680.3 929 1792 1854 1442 1886 1851 1673 2272 2176 1867 1402 1761 1999 1869 1304 succinate dehydrogenase AT5G40650 Solyc02g093690.3 321 546 433 353 358 355 306 406 421 314 283 376 617 473 430 ATP synthase mitochondrial F1 complex assembly factor 2-like (AHRD V3.3 *** A0A2I4GLH9_9ROSI) AT5G40660 Solyc02g093700.3 70 29 62 61 26 16 38 29 30 80 67 64 142 35 59 Cystinosin-like protein (AHRD V3.3 *** A0A1U8FR03_CAPAN) AT5G40670 Solyc02g093710.1 240 164 200 151 73 102 71 88 222 379 282 181 282 181 104 B3 DNA binding domain (AHRD V3.3 *-* A0A200R4H2_9MAGN) AT5G40690 Solyc02g093720.3 267 1458 1489 2501 3767 3301 3405 3673 1475 1057 1685 2344 314 836 934 TPX2 (Targeting protein for Xklp2) protein family (AHRD V3.3 *-* F4J761_ARATH) AT3G01710 Solyc02g093730.4 280 184 245 232 335 277 324 225 244 262 303 201 163 203 231 DUF971 domain-containing protein (AHRD V3.3 *** A0A1Q3CZE5_CEPFO) AT3G27340 Solyc02g093740.3 64 33 59 42 34 26 13 13 20 83 27 43 26 30 54 R2R3MYB transcription factor 99 Solyc02g093750.3 139 105 48 75 33 32 15 26 41 48 79 31 81 84 148 C3H4 type zinc finger protein (DUF23) (AHRD V3.3 *** Q9FM26_ARATH) AT5G40720 Solyc02g093760.4 57 365 306 514 697 766 678 695 379 174 286 458 69 194 294 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *-* F4IWG7_ARATH) Solyc02g093770.3 991 1540 1236 1951 1681 1757 2011 2023 1806 1880 1416 1678 1481 1720 1552 GPI inositol-deacylase (AHRD V3.3 *** A0A1J3D6Y4_NOCCA) AT3G27325 Solyc02g093775.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Unknown protein Solyc02g093790.3 443 537 754 591 509 628 680 602 517 487 610 521 587 560 597 alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT3G27320.1) AT5G14310 Solyc02g093800.3 1015 907 922 1087 1083 1092 1267 1062 979 1022 1023 863 898 1033 1122 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *** A0A2G2XIR2_CAPBA) AT1G13460 Solyc02g093810.3 1091 984 926 1021 1082 970 997 1027 969 896 810 986 734 1006 816 AUGMIN subunit 6-like (AHRD V3.3 *** A0A2I4HNB2_9ROSI) AT5G40740 Solyc02g093820.4 3442 1675 1459 1470 1238 1113 1108 1161 1168 1522 1324 1391 1425 1490 1841 Plant UBX domain-containing protein 1 (AHRD V3.3 *** A0A2G3ACQ0_CAPAN) AT3G27310 Solyc02g093830.4 1848 1408 1356 1352 1043 942 1077 1073 1740 1926 1562 1394 1966 1973 1941 Glucose-6-phosphate 1-dehydrogenase (AHRD V3.3 *** F2Z9R1_NICBE) AT5G40760 Solyc02g093840.3 942 784 843 802 599 848 767 676 674 706 646 578 709 847 874 F-box protein SKIP14-like (AHRD V3.3 *** A0A2I4HNF7_9ROSI) Solyc02g093850.3 977 638 605 640 1559 1465 1368 1393 883 683 841 780 453 816 959 Ankyrin repeat (AHRD V3.3 *** A0A200R4C9_9MAGN) AT3G01750 Solyc02g093860.3 401 292 235 216 73 124 96 134 246 423 389 144 548 381 231 Lysine histidine transporter-like 1 (AHRD V3.3 *** A0A1U8FZ64_CAPAN) AT5G40780 Solyc02g093870.4 5 5 17 22 4 8 5 16 7 9 2 23 2 13 0 Lysine histidine transporter 1 (AHRD V3.3 *** A0A1U8FSC7_CAPAN) Solyc02g093880.3 3195 1848 2318 1834 1340 1557 1353 1421 2141 2205 2402 1678 2169 2433 2773 transcription factor GTE8 (AHRD V3.3 *** A0A2G3ACN9_CAPAN) AT3G27260 Solyc02g093890.1 1442 469 251 356 163 191 153 136 259 607 301 356 368 500 1015 hypothetical protein (AHRD V3.3 *** AT5G40800.1) AT3G27250 Solyc02g093900.3 3295 3916 3866 3652 4014 4008 3690 3824 3044 3109 3318 3387 3575 3568 3777 Cytochrome c1 (AHRD V3.3 *** A0A200Q1S0_9MAGN) AT5G40810 Solyc02g093910.3 213 244 353 332 440 346 418 361 243 204 216 225 248 299 251 Kelch repeat-containing protein (AHRD V3.3 *** A0A2G3DAA9_CAPCH) Solyc02g093920.2 1615 1417 1142 1240 1251 1227 1217 1652 1332 1487 952 1490 1416 1414 1194 COP9 signalosome complex subunit 3 (AHRD V3.3 *** A0A2G3ACW7_CAPAN) AT5G14250 Solyc02g093930.4 1835 713 843 767 729 821 800 688 1086 1398 1186 1105 652 800 1031 sister chromatid cohesion 1 protein 2 (AHRD V3.3 *** A0A2I4GMH3_9ROSI) AT5G40840 Solyc02g093940.3 742 832 822 920 985 943 1036 834 832 748 804 817 893 929 733 Transcription termination factor (AHRD V3.3 *** A0A2U1MIZ5_ARTAN) AT4G14605 Solyc02g093950.3 774 928 1059 781 676 668 524 826 1348 896 785 960 431 899 543 Ankyrin repeat (AHRD V3.3 *** A0A200QY43_9MAGN) AT5G14230 Solyc02g093960.3 5 4 25 2 7 0 0 2 9 5 11 2 5 14 75 Endosomal targeting BRO1-like domain-containing protein (AHRD V3.3 *** A0A2U1PPW2_ARTAN) AT5G14020 Solyc02g093970.4 975 1910 1905 1527 1990 2007 1977 2263 2454 1938 1724 1589 1776 1912 1412 Protein kinase domain (AHRD V3.3 *** A0A200QYA9_9MAGN) AT5G14210 Solyc02g093980.3 236 873 506 663 931 805 873 961 1193 882 625 772 662 671 759 Nucleolar-like protein (AHRD V3.3 *-* F4J3H8_ARATH) Solyc02g093990.4 37 115 230 152 169 146 134 146 136 155 260 159 170 82 143 Adenylate kinase (AHRD V3.3 *** A0A200R4A0_9MAGN),Pfam:PF00406 AT3G01820 Solyc02g094000.1 265 162 227 17 0 0 1 2 7 17 399 39 34 71 157 EF_hand_5 domain-containing protein/EF_hand_6 domain-containing protein (AHRD V3.3 *** A0A1Q3B940_CEPFO) Solyc02g094010.2 6 3 39 45 8 9 8 18 19 14 33 8 20 8 34 protein LYK2-like (AHRD V3.3 *** A0A2I4GZC8_9ROSI) AT3G01840 Solyc02g094030.3 386 409 798 561 344 276 357 394 349 723 1104 549 576 445 793 DSR6 (AHRD V3.3 *** A0A076V4W1_CAPAN) AT3G01860 Solyc02g094040.3 0 0 0 1 0 0 2 1 1 0 0 0 5 0 10 Lipase (AHRD V3.3 *** A0A2G3DA77_CAPCH) AT5G14180 Solyc02g094050.4 2 49 42 22 35 18 27 15 32 43 24 21 5 29 80 Blue copper protein (AHRD V3.3 *** A0A2K3LS79_TRIPR) AT3G27200 Solyc02g094080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G3B5C9_CAPCH) Solyc02g094090.4 1460 1954 1441 1769 2312 1931 2089 2149 1931 1694 1220 1636 2016 2007 2025 Vacuolar protein sorting-associated protein 52 A (AHRD V3.3 *** A0A1U8FR82_CAPAN) AT1G71270 Solyc02g094100.4 66 430 493 383 927 815 911 742 531 287 384 530 288 553 132 Fidgetin-like protein 1 (AHRD V3.3 *** A0A2G3ACW9_CAPAN) AT3G27120 Solyc02g094110.1 0 0 1 0 0 1 0 1 0 2 0 0 2 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200QGE7_9MAGN) Solyc02g094120.3 3525 1703 1222 1250 915 894 816 864 1265 1562 1106 995 866 964 1666 sulfite oxidase AT3G01910 Solyc02g094125.1 59 52 38 43 11 23 21 26 16 22 21 32 55 42 32 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PRV8_9MAGN) Solyc02g094130.3 10566 4374 3817 3521 2568 2929 2704 2714 3822 3705 4272 3328 3124 3097 4974 DCD (Development and Cell Death) domain protein (AHRD V3.3 *-* A0A2U1P2J5_ARTAN) AT3G27090 Solyc02g094140.4 1030 1273 1101 1046 1216 1019 1013 1060 1084 924 684 807 1396 1179 970 Mitochondrial import receptor subunit TOM20 (AHRD V3.3 *** TOM20_SOLTU),Pfam:PF06552 AT3G27080 Solyc02g094150.4 302 258 237 273 256 260 241 241 243 279 206 258 269 295 225 Sua5/YciO/YrdC/YwlC family protein (AHRD V3.3 *** B2SXU1_PARPJ) AT3G01920 Solyc02g094160.1 164 2896 1960 2030 2548 2471 2341 2513 2032 1124 1169 2686 1251 2789 711 Ribonucleoside-diphosphate reductase small chain (AHRD V3.3 *** A0A1U8FR86_CAPAN) AT3G27060 Solyc02g094170.3 592 559 589 571 586 545 535 438 486 443 560 390 662 617 678 Zinc finger protein (AHRD V3.3 *** A0A200QGB0_9MAGN) AT5G14140 Solyc02g094180.3 13 6 2 2 0 1 0 0 5 8 4 4 22 6 0 Peroxidase (AHRD V3.3 *** K4BDL3_SOLLC) Solyc02g094190.3 46 125 103 155 140 144 88 117 146 132 146 133 85 97 84 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1PZJ0_ARTAN) AT3G01930 Solyc02g094200.3 2250 2953 3282 2987 3328 2983 3290 3283 2573 2715 3234 2794 2936 2564 2746 Nuclear transport factor 2 (AHRD V3.3 *** A0A1U8FRA0_CAPAN) AT1G27970 Solyc02g094210.1 7 24 96 45 36 57 57 34 22 46 94 15 14 25 43 Transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** Q8LBX6_ARATH) AT5G08391 Solyc02g094220.2 1267 1079 1719 1584 1565 1387 1556 1426 850 1239 1403 1071 1312 1034 1080 Transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** Q9SMN3_ARATH) AT5G40970 Solyc02g094230.1 15 12 0 0 0 6 4 1 2 4 0 0 0 1 0 Unknown protein Solyc02g094240.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Unknown protein Solyc02g094250.4 121 169 120 108 75 82 121 83 90 84 110 100 189 159 161 Unknown protein Solyc02g150150.1 12 28 24 7 10 21 26 21 22 30 14 29 11 39 22 Unknown protein Solyc02g094260.1 347 363 417 336 311 364 352 318 327 334 386 275 424 523 667 Protein SMG9-like (AHRD V3.3 *** A0A2K3P1Q2_TRIPR) Solyc02g094270.2 0 1 18 0 0 0 0 0 0 4 0 0 1 2 0 DNA-binding WRKY (AHRD V3.3 *-* A0A200R410_9MAGN) AT3G01970 Solyc02g094280.4 1266 1223 1225 1280 1454 1483 1424 1773 1610 2508 1530 1816 1319 1248 1021 Yellow stripe-like protein (AHRD V3.3 *** A0A2D1UXE7_ROSHC) AT3G27020 Solyc02g094290.1 13 1 3 5 0 1 1 2 3 3 4 0 6 7 8 TCP transcription factor 27 Solyc02g094300.4 222 239 186 247 113 141 184 114 224 131 204 138 195 198 273 ACT domain (AHRD V3.3 *** A0A200R426_9MAGN) Solyc02g094310.3 77 76 57 123 68 60 63 66 45 64 53 82 111 174 96 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QGM3_9MAGN) AT5G14080 Solyc02g094320.3 717 700 693 789 712 875 969 882 928 710 606 731 749 811 738 Actin (AHRD V3.3 *** A0A172MJV1_PAESU) AT3G27000 Solyc02g094330.3 273 675 390 505 1316 1215 1125 1213 595 587 520 680 454 549 281 Pollen Ole e 1 allergen and extensin family protein (AHRD V3.3 *** F4JEV5_ARATH),Pfam:PF01190 AT5G41050 Solyc02g094340.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 Transcription factor GRAS (AHRD V3.3 *** A0A2U1NLZ8_ARTAN) Solyc02g094350.3 360 269 315 214 193 177 149 140 200 244 293 203 285 210 304 Membrane-anchored ubiquitin-fold protein (AHRD V3.3 *** A0A2G2XJ09_CAPBA) AT3G26980 Solyc02g094360.3 2753 2039 1905 2403 2059 2160 2178 2178 1843 2018 1986 2003 2136 2210 1819 regulation of nuclear pre-mRNA domain-containing protein 1A (AHRD V3.3 *** A0A2I4FR32_9ROSI) AT3G26990 Solyc02g094370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A2G3DA33_CAPCH) AT5G13990 Solyc02g094380.3 0 3 6 6 0 1 0 0 0 0 3 0 3 0 0 Serine/threonine-protein kinase PBS1 (AHRD V3.3 *** A0A2G2XIZ7_CAPBA) Solyc02g094390.3 1319 1901 1838 1331 1935 1759 1518 1845 2055 1714 2096 1929 1348 1663 1705 S-acyltransferase (AHRD V3.3 *** A0A1U8FK29_CAPAN) AT3G26935 Solyc02g094400.4 214 141 295 140 186 191 237 160 155 549 477 376 134 196 204 Glycerophosphodiester phosphodiesterase GDPD2 (AHRD V3.3 *** A0A2G3DA15_CAPCH) AT3G02040 Solyc02g094410.4 3368 2248 1637 2028 1901 1715 1815 1810 1491 2374 1829 1917 1910 1757 1852 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** A0A2K3NWK6_TRIPR) Solyc02g094420.3 470 643 644 797 744 784 742 697 579 527 560 465 631 673 679 Shikimate kinase (AHRD V3.3 *** A0A2K3MVD6_TRIPR) AT3G26900 Solyc02g094430.4 900 832 1084 982 1039 979 1017 889 1054 894 871 907 914 1050 1329 Acyltransferase-like protein, chloroplastic (AHRD V3.3 *** A0A2G3AD32_CAPAN) AT5G41120 Solyc02g094440.4 1713 3683 2909 2922 3711 3577 3600 3814 2825 3010 2759 3067 4595 3999 2845 Translocon-associated protein subunit beta (AHRD V3.3 *** A0A1Q3CAG2_CEPFO),Pfam:PF05753 AT5G14030 Solyc02g094450.2 937 809 856 670 701 626 622 512 562 535 604 615 1233 879 780 nucleolin (AHRD V3.3 *-* AT1G12830.1) Solyc02g094460.2 0 1 0 8 2 6 9 6 0 1 9 3 0 2 4 B3 domain transcription factor (AHRD V3.3 *** Q2HUJ5_MEDTR) AT3G26790 Solyc02g094470.3 3075 8849 5938 9099 7819 7318 7330 10215 5301 7414 4523 7465 7316 7595 5860 Phosphate carrier protein, mitochondrial (AHRD V3.3 *** A0A1U8FRG6_CAPAN) AT5G14040 Solyc02g094480.4 518 1366 1147 1518 1555 1510 1706 1625 1267 1284 1156 1347 1151 1401 718 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R3W0_9MAGN) AT3G26782 Solyc02g094490.4 1018 2161 1440 1170 1873 1673 1273 1649 1928 735 1496 1243 2483 1944 1405 coiled-coil protein (AHRD V3.3 *** AT2G31410.1) AT2G31410 Solyc02g094500.3 866 1118 944 1114 1058 1295 1329 1182 1009 776 1034 955 1135 1244 1128 sialyltransferase-like AT1G08660 Solyc02g094510.4 1250 1153 1048 1219 1096 969 1140 1225 1170 987 929 943 980 1195 1114 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LNJ3_ARATH) Solyc02g094520.3 276 691 493 550 1179 1157 1061 1522 743 646 533 1028 413 689 279 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like (AHRD V3.3 *** A0A1S3YJW9_TOBAC) AT5G13960 Solyc02g094530.1 178 160 75 128 114 119 138 167 187 179 69 142 106 133 150 Nuclear factor related to kappa-B-binding protein (AHRD V3.3 *-* A0A200R3R7_9MAGN) Solyc02g094540.4 1621 1384 1614 1731 1336 1589 1564 1258 1231 1175 1406 1394 1277 1695 1520 nuclear factor kappa-B-binding protein (AHRD V3.3 *-* AT5G13950.4) AT5G13950 Solyc02g094560.3 749 706 658 682 892 793 799 1030 937 841 598 908 687 678 713 Aminopeptidase (DUF3754) (AHRD V3.3 *** Q8RWC3_ARATH) AT3G19340 Solyc02g094570.3 68 111 147 150 164 153 156 130 94 60 213 99 108 98 91 Protein kinase domain (AHRD V3.3 *** A0A200R3P6_9MAGN) AT3G26700 Solyc02g094580.3 20 48 12 35 28 40 33 47 48 29 24 55 39 34 26 Nodulation receptor kinase (AHRD V3.3 *-* A0A1J3FTW3_NOCCA) Solyc02g094585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc02g094590.3 713 635 680 637 582 673 666 745 602 634 609 702 576 765 696 Transcription-repair-coupling factor (AHRD V3.3 *** A0A1J3HTX1_NOCCA) AT3G02060 Solyc02g094600.2 447 378 443 478 469 514 549 307 331 336 488 369 419 526 504 ARM repeat superfamily protein (AHRD V3.3 *-* F4HNZ9_ARATH) Solyc02g094610.1 426 323 209 273 325 287 302 371 360 366 145 398 231 355 231 ARM repeat superfamily protein (AHRD V3.3 *** F4HNZ9_ARATH) AT1G12930 Solyc02g094640.4 1354 1124 933 969 845 990 1037 1201 1394 1098 972 911 564 995 1000 Acetyl-coenzyme A synthetase (AHRD V3.3 *** A0A2G2XHZ6_CAPBA) AT5G36880 Solyc02g094740.1 1 7 11 13 24 36 23 20 8 5 17 16 1 6 4 TPX2 (Targeting protein for Xklp2) family protein (AHRD V3.3 *-* A0A2K3NQ64_TRIPR) Solyc02g094750.1 0 35 33 29 56 69 58 91 43 20 40 57 5 23 10 TPX2 (Targeting protein for Xklp2) protein family (AHRD V3.3 *** F4K9U0_ARATH) AT5G15510 Solyc03g004000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g004003.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g004007.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g005000.4 755 468 508 514 483 487 544 379 493 495 457 509 487 473 707 Peptidase M48 (AHRD V3.3 *-* A0A200R452_9MAGN) AT3G27110 Solyc03g005010.4 1509 1392 1330 1420 1345 1515 1557 1535 1255 1428 1225 1385 1158 1436 1259 RNA methyltransferase (AHRD V3.3 *** A0A200QGE0_9MAGN) AT3G27180 Solyc03g005020.3 12 32 83 36 36 23 24 13 62 53 32 46 22 58 151 Lipase (AHRD V3.3 *** A0A2G2WWE2_CAPBA) AT5G14180 Solyc03g005030.3 1293 673 988 1236 962 778 843 771 883 1161 1272 933 906 809 1090 hypothetical protein (AHRD V3.3 *-* AT3G01860.1) AT3G01860 Solyc03g005040.1 3 0 9 1 0 0 0 0 2 0 5 0 0 0 0 Calcium-binding EF-hand family protein (AHRD V3.3 *** A0A2U1QB61_ARTAN) Solyc03g005050.3 2929 3805 4373 3785 3809 4941 4702 3250 2490 1975 3380 2883 5223 5042 4584 Adenylate kinase (AHRD V3.3 *** A0A200QGC4_9MAGN),Pfam:PF00406 AT3G01820 Solyc03g005060.4 458 864 924 1026 1212 1080 1297 1394 1518 850 851 1136 960 1022 1076 Nucleolar-like protein (AHRD V3.3 *** F4J3H8_ARATH) Solyc03g005080.4 1174 870 862 952 713 718 842 633 713 708 838 813 736 991 931 Protoporphyrinogen oxidase (AHRD V3.3 *** A0A1U8GRF0_CAPAN) AT5G14220 Solyc03g005090.4 392 610 846 963 1040 1107 1054 1029 620 602 666 878 507 664 571 4-coumarate-CoA ligase (AHRD V3.3 *-* E5GBV5_CUCME) AT3G01750 Solyc03g005100.3 292 556 758 622 672 827 880 686 611 348 632 707 594 658 637 alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT3G27320.1) AT3G27320 Solyc03g005110.3 39 82 78 72 108 96 79 137 83 58 34 47 114 65 52 hypothetical protein (DUF626) (AHRD V3.3 --* AT3G19520.2) AT2G37435 Solyc03g005120.3 1496 878 1256 1331 849 1001 945 679 912 1124 1490 891 1106 976 1284 Cystinosin-like protein (AHRD V3.3 *** A0A2G2WWA3_CAPBA) AT5G40670 Solyc03g005130.3 1430 783 782 629 332 370 371 573 628 1107 750 582 666 702 427 Receptor-like protein kinase (AHRD V3.3 *** B6ST43_MAIZE) Solyc03g005140.2 3 1 4 3 1 4 0 2 2 0 0 2 3 5 1 Sugar transporter protein 7 AT5G26250 Solyc03g005150.3 0 0 0 0 0 0 0 0 0 2 2 0 3 0 0 Sugar transporter protein 13 AT5G26250 Solyc03g005160.4 0 17 10 7 13 12 12 18 10 9 1 4 7 4 0 Amine oxidase (AHRD V3.3 *** A0A1U8GHQ9_CAPAN) AT4G14940 Solyc03g005170.3 469 609 891 780 755 947 871 743 741 534 889 635 708 709 1029 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (AHRD V3.3 *** A0A1P8B7I1_ARATH) AT4G14920 Solyc03g005180.1 77 102 84 62 47 62 58 63 70 54 62 33 175 141 90 Ribosomal L18P L5E family protein (AHRD V3.3 *-* A0A2K3LRI1_TRIPR) AT3G22450 Solyc03g005190.3 30 44 54 48 14 22 14 7 24 21 45 49 43 43 77 Unknown protein Solyc03g005200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein-like protein (AHRD V3.3 *** A0A1J6K9J7_NICAT) Solyc03g005210.4 6 1 0 9 0 1 0 0 5 5 12 4 8 17 4 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1Q1B8_ARTAN) AT3G22620 Solyc03g005213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 Unknown protein Solyc03g005217.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g005220.4 386 1071 1151 1034 1574 1451 1442 1453 711 656 875 1038 736 1133 508 Histone H2A (AHRD V3.3 *** A0A1U8G3K0_CAPAN) AT1G54690 Solyc03g005230.3 2690 2806 2320 2561 3038 3023 3172 3293 2861 2722 2085 2750 2462 2370 1951 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic (AHRD V3.3 *** A0A2G2WWA8_CAPBA) AT3G63410 Solyc03g005240.2 0 0 0 0 1 1 0 0 2 0 0 4 0 0 0 calmodulin-like (AHRD V3.3 *** A0A2I4G5N7_9ROSI) Solyc03g005250.4 137 189 227 154 178 209 206 179 199 123 172 138 153 168 197 ATP sulfurylase (AHRD V3.3 *** Q8SAG1_SOYBN) AT3G22890 Solyc03g005260.3 251 483 458 504 403 381 435 419 553 405 559 399 564 391 429 ATP sulfurylase (AHRD V3.3 *** Q9ZNZ8_BRAJU) AT3G22890 Solyc03g005270.3 695 821 1073 871 836 815 774 787 866 790 844 802 1016 940 1093 Transmembrane emp24 domain-containing protein p24beta3 (AHRD V3.3 *** A0A1U8GHQ4_CAPAN) AT3G22845 Solyc03g005280.4 56 38 54 213 0 0 0 0 33 56 8 8 20 33 2 Aspartic proteinase A1 (AHRD V3.3 *** A0A2G3CJM2_CAPCH) Solyc03g005290.2 147 22 3 26 6 13 3 16 16 42 16 25 27 60 78 swi5-dependent recombination DNA repair protein 1 homolog isoform X1 (AHRD V3.3 *-* XP_010317398.1) Solyc03g005300.3 362 552 505 504 576 535 616 616 553 620 508 500 545 469 463 ADP-ribosylation factor (AHRD V3.3 *** A0A1Y1IJD1_KLENI) AT3G22950 Solyc03g005310.4 1559 1022 910 806 1011 983 865 991 775 1019 665 1158 852 888 567 Armadillo repeat-containing protein LFR (AHRD V3.3 *** A0A2G3CJL6_CAPCH) AT3G22990 Solyc03g005320.3 49 122 279 170 85 138 68 81 281 77 383 146 47 162 60 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G2WWC0_CAPBA) AT5G43760 Solyc03g005330.1 29 14 17 17 1 6 3 4 11 6 6 2 43 37 20 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2WWB5_CAPBA) AT3G23000 Solyc03g005340.4 891 975 994 1081 1167 1208 1236 1231 1063 1055 785 1044 801 966 944 Acylamino-acid-releasing enzyme (AHRD V3.3 *** A0A1J3FLE9_NOCCA) AT4G14570 Solyc03g005350.3 1631 968 788 827 950 715 783 753 661 934 850 793 982 806 780 bHLH transcription factor 018 Solyc03g005370.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc03g005380.3 677 506 532 373 433 514 473 509 386 565 383 523 346 459 397 Protein transport protein SEC23 (AHRD V3.3 *** A0A2G2ZKX5_CAPAN) AT5G43670 Solyc03g005390.3 497 590 898 893 899 1011 1041 820 774 743 898 596 747 861 1057 Magnesium transporter MRS2-I (AHRD V3.3 *** A0A2G2ZKY8_CAPAN) AT5G64560 Solyc03g005393.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g005395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g005397.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g005410.4 1533 1364 1408 1501 1240 1383 1377 1190 1325 1438 1312 1340 1358 1410 1566 Phosphatidate cytidylyltransferase (AHRD V3.3 *** A0A1U8GH76_CAPAN),Pfam:PF01148 Solyc03g005420.2 228 207 187 120 60 66 36 67 138 193 126 139 99 129 194 Flotillin-like protein 2 (AHRD V3.3 *** A0A1U8GRB6_CAPAN) Solyc03g005430.4 3880 2300 1859 1951 1465 1667 1779 1719 1993 2512 1998 2056 1721 2019 2430 MATH domain-containing protein (AHRD V3.3 *** A0A1Q3BTU7_CEPFO) AT1G04300 Solyc03g005440.3 167 164 150 183 158 198 164 156 146 134 129 122 198 188 221 Agenet domain protein (AHRD V3.3 *** G7JN46_MEDTR) AT5G42670 Solyc03g005450.3 4699 1676 811 1236 288 305 287 250 663 1196 780 479 867 1059 1345 Cellulose synthase (AHRD V3.3 *** A0A200Q4F9_9MAGN) Solyc03g005455.1 0 0 0 0 0 2 2 4 0 0 2 3 0 5 1 Unknown protein Solyc03g005460.4 14 340 327 316 686 585 581 685 336 144 248 392 97 429 96 SNF2-related (AHRD V3.3 *** A0A200QTY5_9MAGN) AT5G43530 Solyc03g005470.3 1514 3498 3228 3744 5456 6154 5941 4296 1900 2328 2967 3064 3494 2983 2356 HR-like lesion-inducing protein-related (AHRD V3.3 *** B6SJ11_MAIZE) AT4G14420 Solyc03g005480.4 0 4 8 4 0 1 0 0 0 0 9 0 0 3 6 WAT1-related protein (AHRD V3.3 *** K4BDX2_SOLLC) Solyc03g005490.4 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1Q188_ARTAN) Solyc03g005500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A1U8GJ51_CAPAN) AT5G43410 Solyc03g005510.2 1 2 0 0 0 0 0 0 1 4 0 0 1 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3CJQ9_CAPCH) AT3G23230 Solyc03g005520.1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor 1B (AHRD V3.3 *** A0A2G2WWE4_CAPBA) AT3G23240 Solyc03g005530.1 0 0 2 0 0 0 0 0 1 1 0 1 0 0 0 Phosphate transporter (AHRD V3.3 *** Q9AYT2_TOBAC) Solyc03g005550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc03g005555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphate transporter (AHRD V3.3 *** Q9AYT2_TOBAC) Solyc03g005570.3 158 65 117 22 32 31 16 18 24 25 408 67 71 64 107 Myb-related transcription factor LBM2 (AHRD V3.3 *** Q9SLT1_TOBAC) AT3G23250 Solyc03g005580.2 0 1 0 1 2 2 0 4 0 0 0 0 0 2 0 Seed storage protein (AHRD V3.3 *** Q2TPW5_9ROSI) Solyc03g005590.2 4 20 17 22 61 49 56 43 24 6 31 42 11 33 23 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A1P8B4Z7_ARATH) AT3G23270 Solyc03g005600.3 453 1450 862 916 1347 1242 1356 1528 1193 805 774 965 1256 1081 1022 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MED4_ARTAN) AT4G14360 Solyc03g005610.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polyubiquitin (AHRD V3.3 *** A0A2P6TPU3_CHLSO) Solyc03g005620.4 52 428 424 553 815 887 764 1067 599 319 481 617 105 276 259 Kinesin (AHRD V3.3 *** A0A200PVY6_9MAGN) AT4G14330 Solyc03g005630.3 10 7 20 13 13 16 26 21 5 4 5 12 13 3 0 DUF810 domain-containing protein (AHRD V3.3 *** A0A1Q3AX67_CEPFO),Pfam:PF05664 AT2G33420 Solyc03g005640.1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein, putative (DUF247) (AHRD V3.3 *-* Q9SN03_ARATH) Solyc03g005650.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A200Q3R7_9MAGN) Solyc03g005660.4 440 340 318 364 260 251 266 249 261 295 246 244 461 332 299 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc03g005670.3 54 42 44 18 23 20 24 17 18 35 39 16 47 40 48 Disease resistance protein (AHRD V3.3 *** A0A200R7W2_9MAGN) Solyc03g005680.3 1255 1470 896 935 1003 1092 1030 1007 857 799 826 932 1392 1348 841 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4K4W6_ARATH) AT4G14300 Solyc03g005690.3 631 781 640 653 1065 1088 1004 976 703 545 721 685 777 790 582 Cysteine-rich repeat secretory protein 3 (AHRD V3.3 *** A0A2G2ZL38_CAPAN) AT1G04520 Solyc03g005700.1 241 510 456 335 264 293 256 248 226 189 259 238 830 590 389 mitochondrial import receptor subunit TOM9-2-like (AHRD V3.3 *** A0A1S3Y998_TOBAC) Solyc03g005710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* A0A2U1QI59_ARTAN) Solyc03g005720.3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* O22783_ARATH) AT2G33320 Solyc03g005730.4 2012 2453 1693 2283 2207 2329 2280 2313 2147 2297 1709 1932 2590 2323 2124 3-isopropylmalate dehydratase large subunit (AHRD V3.3 *** A0A2G2WWL6_CAPBA) AT4G13430 Solyc03g005740.3 553 925 984 1001 1037 1140 1079 1008 843 769 1155 858 1291 1097 1170 Microsomal signal peptidase 12kDa subunit (AHRD V3.3 *** A0A200R462_9MAGN) AT2G22425 Solyc03g005750.3 19983 8306 6617 5885 6764 6306 6278 7162 5518 7204 6716 6576 5181 6330 7362 DUF1296 domain-containing protein (AHRD V3.3 *** A0A1Q3CH94_CEPFO) AT1G29370 Solyc03g005760.1 11270 15698 6115 12592 19279 18464 20366 18995 14616 18602 5077 18028 13188 8140 4587 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G2W7Q4_CAPBA) AT1G29930 Solyc03g005770.3 1256 4379 1826 2501 8313 7471 8662 7373 3325 3709 1151 2660 1432 1037 602 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G2W7Q4_CAPBA) AT1G29930 Solyc03g005780.3 233 1923 417 787 3355 2863 3314 2997 1498 1589 371 1085 424 370 217 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G2W7Q4_CAPBA) AT1G29930 Solyc03g005800.4 255 166 178 286 244 255 221 197 170 195 248 241 203 203 173 UDP-N-acetylglucosamine transferase subunit ALG14 (AHRD V3.3 *** A0A2K3NM56_TRIPR) AT4G18230 Solyc03g005810.4 19 9 6 3 0 3 2 0 0 2 5 0 1 2 11 Purine permease (AHRD V3.3 *** A0A2R6Q6Y9_ACTCH),Pfam:PF16913 Solyc03g005820.3 390 222 135 224 89 64 95 71 124 186 139 101 167 191 286 Purine permease (AHRD V3.3 *** A0A2U1LZ77_ARTAN),Pfam:PF16913 Solyc03g005830.4 479 683 557 798 496 624 549 547 597 606 524 417 628 668 543 O-acetyltransferase family protein (AHRD V3.3 *** A0A2U1PD69_ARTAN) AT2G34410 Solyc03g005840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 6 70 Two-pore potassium channel 3 (AHRD V3.3 *** A0A2G3A7I8_CAPAN) Solyc03g005850.2 3 7 0 1 11 12 15 5 11 11 10 6 2 3 3 muscle M-line assembly protein unc-89 (AHRD V3.3 --* XP_023909195.1) Solyc03g005860.4 7 4 0 1 0 3 0 0 6 6 16 0 6 10 0 ABC transporter B family member 12 (AHRD V3.3 *** A0A2G3CJR4_CAPCH) Solyc03g005870.4 606 714 627 628 879 842 859 818 747 672 553 814 728 763 584 eukaryotic translation initiation factor 4E AT4G18040 Solyc03g005880.3 45 13 0 6 0 0 2 5 0 0 0 0 4 1 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVG2_SOLTU) Solyc03g005900.4 6 43 23 20 76 75 53 55 78 31 36 61 15 13 34 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2XF69_CAPBA) AT5G45670 Solyc03g005910.3 897 1208 822 689 2241 1921 1621 1801 1855 1638 1063 789 2726 1063 306 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6RG70_ACTCH) Solyc03g005920.4 234 270 282 318 376 365 321 313 336 286 320 304 274 278 282 Protein kinase domain (AHRD V3.3 *** A0A200QV19_9MAGN) AT3G58760 Solyc03g005930.3 513 426 871 653 711 711 834 585 503 359 741 470 707 621 729 Cyclic phosphodiesterase (AHRD V3.3 *** A0A2G2ZL60_CAPAN) AT4G18930 Solyc03g005940.4 0 1 0 0 0 0 0 0 0 0 0 3 0 11 1 oil body-associated protein 2A-like (AHRD V3.3 *** A0A2I4FEE8_9ROSI) AT5G45690 Solyc03g005943.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g005947.1 8 1 0 0 0 0 0 0 0 0 3 0 10 1 0 protein NRT1/ PTR FAMILY 4.4 (AHRD V3.3 *-* A0A2I4FR99_9ROSI) Solyc03g005960.3 3567 3188 4399 3122 3843 3419 3857 3605 3908 4220 4729 2800 5474 3189 2184 protein kinase LESK1 Solyc03g005970.4 82 82 81 100 70 73 74 78 77 117 42 139 63 122 62 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WW46_CAPBA) AT3G53690 Solyc03g005980.3 22 4 0 9 0 1 0 0 6 0 0 3 5 10 16 NOD26-like intrinsic protein 1.1 AT4G18910 Solyc03g005990.3 793 1015 1343 1196 1192 1183 1302 1244 881 953 1224 996 800 892 782 BES1/BZR1 (AHRD V3.3 *** A0A2K3PP13_TRIPR) AT1G78700 Solyc03g006000.3 420 270 334 228 133 148 147 156 255 292 282 177 318 257 265 Heat shock transcription factor (AHRD V3.3 *** Q9M597_MEDSA) AT4G18880 Solyc03g006010.3 16 13 56 12 10 31 20 8 20 11 9 5 8 12 40 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2) AT2G47010 Solyc03g006020.3 116 135 223 133 199 150 158 142 144 124 237 125 143 163 119 Ubiquitin domain-containing protein (AHRD V3.3 *** A0A2U1N283_ARTAN) Solyc03g006030.4 126 188 76 188 211 209 162 278 204 155 131 120 160 153 236 LRR receptor-like serine/threonine-protein kinase EFR (AHRD V3.3 *** A0A1U8GGG3_CAPAN) Solyc03g006040.3 90 262 241 445 791 673 705 665 285 170 279 402 283 426 173 Transcription factor bHLH35-like protein (AHRD V3.3 *** F4I1F3_ARATH) AT1G29270 Solyc03g006043.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc03g006047.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc03g006050.4 198 362 227 487 383 372 340 402 276 368 199 321 184 295 183 receptor-like protein 51 (AHRD V3.3 *-* A0A2I4GVM3_9ROSI) Solyc03g006060.3 109 106 159 112 62 103 99 78 81 81 146 109 133 114 129 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* B6SN54_MAIZE) Solyc03g006070.3 3459 3485 4949 4110 3763 4277 4181 3648 3171 4247 4854 3410 3355 2923 3345 SHAGGY-like kinase (AHRD V3.3 *** N0A047_WHEAT) AT4G18710 Solyc03g006080.4 136 198 202 201 47 42 35 25 135 150 184 44 210 260 287 leucine-rich repeat receptor protein kinase EMS1-like (AHRD V3.3 *** A0A1U8ESV6_CAPAN) Solyc03g006100.4 289 336 181 335 404 482 470 378 328 261 198 204 211 227 380 LRR receptor-like serine/threonine-protein kinase EFR (AHRD V3.3 *** A0A1U8GGG3_CAPAN) Solyc03g006110.3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2ZLG0_CAPAN) AT5G45820 Solyc03g006120.4 1 0 6 0 0 0 0 0 0 0 0 0 0 1 0 Transcription factor TGA like domain (AHRD V3.3 *** A0A200Q9U0_9MAGN) AT4G18690 Solyc03g006130.3 915 461 764 494 467 447 491 400 468 718 863 331 366 383 491 Protein male discoverer 2 (AHRD V3.3 *** A0A1J6HZQ5_NICAT) AT5G45840 Solyc03g006140.3 3091 2542 2678 2828 1883 1737 1783 1751 2642 2804 2309 2343 2192 2386 2460 Neutral ceramidase (AHRD V3.3 *** A0A2G2ZL79_CAPAN) AT1G07380 Solyc03g006150.2 11 12 11 5 14 20 13 14 28 8 30 43 38 12 4 Myb domain, Homeodomain-like protein (AHRD V3.3 *-* A0A2U1Q384_ARTAN) AT2G42660 Solyc03g006160.1 8 8 24 12 3 3 0 0 8 23 16 3 10 7 34 Phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein (AHRD V3.3 *** A0A2P5EP15_TREOI) Solyc03g006170.4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Pollen allergen Ole e 1 family (AHRD V3.3 *** A0A2U1LWI3_ARTAN) Solyc03g006177.2 392 232 217 265 261 239 242 191 278 179 252 183 223 236 202 Plant-specific tfiib-related protein ptf2 (AHRD V3.3 *** A0A314KTQ6_NICAT) AT4G35540 Solyc03g006200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine protease (AHRD V3.3 *** A0A2U1PKJ9_ARTAN) Solyc03g006210.2 12 6 0 0 0 0 0 0 8 2 0 3 0 5 0 Cysteine protease-like protein (AHRD V3.3 *** Q9SG15_ARATH) Solyc03g006220.4 19 89 46 113 114 126 138 100 135 38 42 58 109 110 113 Protein trichome birefringence-like 39 (AHRD V3.3 *-* A0A2G3CK39_CAPCH) Solyc03g006230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein (AHRD V3.3 *** O49522_ARATH) AT4G18540 Solyc03g006240.3 196 436 534 558 537 492 361 465 621 584 504 724 419 480 168 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2ZLG9_CAPAN) AT5G45910 Solyc03g006250.2 141 379 43 156 40 62 57 41 385 823 149 495 216 82 81 GDSL esterase/lipase (AHRD V3.3 *** A0A1U8GGV5_CAPAN) AT1G28590 Solyc03g006260.4 324 314 286 278 510 328 353 371 322 240 196 122 726 328 368 Calcium-binding EF-hand family protein (AHRD V3.3 *-* A0A2U1MZJ3_ARTAN) Solyc03g006270.3 0 1 0 0 3 1 3 2 0 0 0 0 0 0 0 RAB GTPase (AHRD V3.3 *** A0A2U1Q460_ARTAN) Solyc03g006280.4 394 379 334 366 302 393 414 289 281 220 323 341 412 435 474 deneddylase (AHRD V3.3 *** AT1G28530.2) AT1G28530 Solyc03g006290.4 3 1 1 6 0 7 0 0 1 2 0 11 6 3 5 DUF599 domain-containing protein (AHRD V3.3 *** A0A1Q3C482_CEPFO) AT5G46060 Solyc03g006300.3 128 190 161 159 448 374 370 383 290 255 224 299 155 234 97 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6QLC9_ACTCH) AT1G28440 Solyc03g006310.4 555 1120 1079 969 1137 1010 1066 1040 497 663 1025 813 1584 1257 929 Unknown protein Solyc03g006320.1 292 182 219 148 225 195 179 158 179 247 222 210 181 188 230 Ethylene-responsive transcription factor 4 (AHRD V3.3 *-* A0A2G2VSG2_CAPBA) Solyc03g006330.4 319 420 637 464 524 546 469 412 616 505 642 614 476 479 615 Leucine-rich repeat receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A0A7LUM7_ALBBR) AT1G28340 Solyc03g006350.3 1213 723 698 434 398 504 477 456 523 499 561 479 581 599 852 Zinc finger transcription factor 23 AT2G33835 Solyc03g006360.3 13789 4014 3027 1608 500 496 256 392 1217 4306 895 1617 835 1768 2565 Auxin-repressed protein (AHRD V3.3 *** A9YSI8_TOBAC) AT1G28330 Solyc03g006365.1 140 79 186 178 65 139 142 74 81 85 142 71 88 124 153 Unknown protein Solyc03g006370.3 34 22 5 22 26 23 31 14 16 23 13 15 14 29 52 Unknown protein Solyc03g006380.4 299 184 167 282 134 168 175 138 179 153 277 162 182 249 459 Defective in cullin neddylation protein (AHRD V3.3 *-* A0A2G2WWP7_CAPBA) Solyc03g006390.2 43 37 58 61 35 83 49 58 62 59 42 43 22 66 49 Transcriptional corepressor LEUNIG (AHRD V3.3 *-* A0A1J3DA91_NOCCA) Solyc03g006400.3 288 376 584 527 515 639 677 501 550 359 598 428 701 600 480 MAP kinase kinase kinase 25 AT5G58950 Solyc03g006410.3 0 7 0 1 9 9 17 5 0 0 0 1 3 2 39 PDDEXK-like protein (AHRD V3.3 *** A0A2U1QIN2_ARTAN) AT2G20670 Solyc03g006420.4 2051 1953 1362 2006 1843 1607 1991 2410 1913 2636 1381 2164 1327 1576 997 Origin recognition complex subunit 1 (AHRD V3.3 *** A0A2G3CK53_CAPCH) AT4G12620 Solyc03g006430.3 270 750 808 1243 1000 1198 1403 918 915 607 890 890 590 706 623 DUF616 domain-containing protein (AHRD V3.3 *** A0A1Q3BIE2_CEPFO) AT1G28240 Solyc03g006440.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 (AHRD V3.3 *** A0A1U8GH87_CAPAN) Solyc03g006450.2 0 0 0 2 0 0 0 0 0 0 0 0 0 6 0 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 (AHRD V3.3 *** A0A1U8GH87_CAPAN) Solyc03g006452.1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 Phospholipid scramblase (AHRD V3.3 *** A0A2G2WW70_CAPBA) AT2G04940 Solyc03g006454.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Phospholipid scramblase (AHRD V3.3 *-* A0A1U8GQV0_CAPAN) Solyc03g006456.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g006458.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 (AHRD V3.3 *** A0A1U8GH87_CAPAN) Solyc03g006460.4 299 255 166 258 230 265 172 337 319 325 164 331 316 289 249 Phospholipid scramblase (AHRD V3.3 *** A0A1U8GQV0_CAPAN) AT2G04940 Solyc03g006470.3 6 12 7 2 1 1 1 0 6 2 4 0 1 2 0 CBS domain-containing protein (AHRD V3.3 *** A0A1Q3C2E1_CEPFO) Solyc03g006480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UvrD-like Helicase, ATP-binding domain, P-loop containing nucleoside triphosphate hydrolase (AHRD V3.3 *** A0A2U1P0A8_ARTAN) Solyc03g006490.3 2522 429 280 247 761 662 799 633 450 2859 1211 615 93 191 229 Stem-specific protein TSJT1 (AHRD V3.3 *** A0A2G2WW08_CAPBA) Solyc03g006500.3 352 440 604 479 316 354 352 229 410 360 545 344 847 634 612 Protein kinase domain (AHRD V3.3 *** A0A200PQT3_9MAGN) Solyc03g006510.4 1697 2542 2666 2108 3044 2758 2536 3471 3088 2109 2750 2891 3859 2947 2269 Clathrin light chain (AHRD V3.3 *** A0A2G3D6A8_CAPCH) Solyc03g006520.3 772 650 438 432 453 464 511 486 535 483 475 349 744 703 602 Splicing factor 3B subunit 2 (AHRD V3.3 *** A0A2G2XEY6_CAPBA) AT4G21660 Solyc03g006530.3 3 1 1 2 0 0 0 7 1 1 0 1 0 2 0 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* A0A1P8AWR9_ARATH) AT4G04980 Solyc03g006540.3 16 31 55 56 104 81 63 79 33 24 30 23 13 14 28 hypothetical protein (AHRD V3.3 *** AT2G01755.2) AT2G01755 Solyc03g006545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *-* A0A076GH23_POPTR) Solyc03g006550.4 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 Terpene synthase (AHRD V3.3 *** A0A076GH23_POPTR) AT1G61120 Solyc03g006560.3 359 457 383 428 556 525 401 485 387 333 425 503 337 314 319 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** O04083_ARATH) AT1G11090 Solyc03g006570.3 653 611 787 618 529 592 625 508 755 536 580 470 654 724 646 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (AHRD V3.3 *** B3H7J3_ARATH) AT1G61140 Solyc03g006580.3 488 467 507 504 540 497 505 456 434 367 472 407 598 547 461 LisH and RanBPM domains containing protein (AHRD V3.3 *** A8MQN5_ARATH) AT1G61150 Solyc03g006590.3 170 700 846 906 1384 1713 1594 1165 911 464 1024 962 501 731 589 multidrug resistance protein (AHRD V3.3 *** AT1G09812.1) AT1G11120 Solyc03g006600.1 219 344 307 303 290 269 231 298 286 237 280 377 308 313 257 hypothetical protein (AHRD V3.3 *** AT1G11125.1) Solyc03g006610.3 0 3 17 12 4 7 2 9 6 0 0 7 3 7 50 Arf GTPase activating protein (AHRD V3.3 *** A0A200RBV9_9MAGN) Solyc03g006620.3 336 237 113 160 168 140 133 203 163 196 135 191 199 83 63 Cotton fiber (DUF761) (AHRD V3.3 *** F4HTI9_ARATH) Solyc03g006630.3 115 48 75 132 31 28 19 31 81 53 55 67 60 80 83 Sphingosine kinase 1 (AHRD V3.3 *** A0A2G2WVZ4_CAPBA) AT4G21540 Solyc03g006640.3 509 385 359 359 599 669 592 475 352 298 380 322 298 272 282 F-box family protein (AHRD V3.3 *** A0A2U1N101_ARTAN) AT4G21510 Solyc03g006650.2 21 1 0 0 0 0 0 0 1 0 0 0 0 0 0 Sugar transporter protein 10 AT1G11260 Solyc03g006660.3 644 761 801 698 657 762 666 580 567 510 613 605 940 704 813 Protein kinase superfamily protein (AHRD V3.3 *** F4I8V6_ARATH) AT1G11390 Solyc03g006670.4 53 141 165 137 79 88 80 73 237 143 264 147 116 146 113 cyclinD6_2 Solyc03g006680.3 1200 1565 1077 1355 1572 1735 1661 1695 1401 1258 1280 1512 1504 1308 1231 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A2U1N8C2_ARTAN) AT1G11360 Solyc03g006690.1 0 2 0 5 1 5 4 3 0 0 4 3 5 0 7 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A1P8BCJ3_ARATH) Solyc03g006700.3 14 18 1 9 0 0 0 0 3 14 0 0 9 48 5 Peroxidase (AHRD V3.3 *** K4BE93_SOLLC) Solyc03g006710.1 4 0 8 5 0 1 0 0 3 0 10 0 1 2 0 Calcium-binding protein PBP1 (AHRD V3.3 *** A0A1U8F7L1_CAPAN) Solyc03g006712.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g006714.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g006716.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g006718.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g006720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like kinase (AHRD V3.3 *** P93068_BRAOL) AT1G61380 Solyc03g006730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like kinase (AHRD V3.3 *** P93068_BRAOL) AT1G11300 Solyc03g006740.3 0 0 0 0 1 0 0 0 4 0 0 0 0 0 4 NBS-LRR resistance protein (AHRD V3.3 *-* A0A2K3NU03_TRIPR),Pfam:PF18052 Solyc03g006750.1 5 5 2 1 0 3 1 2 7 5 5 0 11 7 1 NBS-LRR disease resistance-like protein (AHRD V3.3 *** Q2LED2_9ROSI) AT5G45440 Solyc03g006760.4 55 17 32 60 0 9 12 9 41 56 77 19 40 55 52 NBS-LRR resistance protein (AHRD V3.3 *** A0A2K3PMF0_TRIPR) Solyc03g006770.4 80 42 31 25 29 21 16 30 40 53 34 29 63 38 25 Receptor protein kinase (AHRD V3.3 *** Q40096_IPOTF) AT4G21380 Solyc03g006780.2 65 48 22 49 40 83 76 55 60 43 73 95 70 77 33 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3A8X5_CAPAN) Solyc03g006790.3 2 0 5 0 0 3 2 3 2 1 8 0 1 1 0 Receptor-like kinase (AHRD V3.3 *-* P93068_BRAOL) Solyc03g006800.1 164 198 160 138 461 422 307 417 166 178 208 383 206 160 43 TCP transcription factor 21 AT5G51910 Solyc03g006805.1 0 0 0 1 1 0 1 2 1 1 1 1 0 5 2 Unknown protein Solyc03g006810.3 6 39 36 87 9 44 50 27 33 50 29 53 3 57 196 Peroxidase (AHRD V3.3 *** K4BEA4_SOLLC) AT5G51890 Solyc03g006820.3 87 103 100 104 116 150 146 101 123 88 103 130 123 119 118 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1M9G2_ARTAN) AT5G51880 Solyc03g006830.3 943 984 884 812 861 860 839 756 751 749 759 752 830 752 768 MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) AT2G45660 Solyc03g006840.4 496 1941 1841 2691 3608 4024 4182 3922 1569 1627 2392 2888 1294 1825 1882 LOW protein: M-phase inducer phosphatase-like protein (AHRD V3.3 *** Q9FIS0_ARATH) AT5G62170 Solyc03g006850.3 167 259 184 205 244 229 237 294 284 178 214 237 214 243 185 junctophilin-like protein (AHRD V3.3 *** AT5G51840.1) AT5G51840 Solyc03g006860.3 216 306 271 360 204 205 209 221 219 258 195 203 352 288 351 fructokinase AT5G51830 Solyc03g006870.3 183 487 556 700 564 617 660 677 685 488 468 594 444 637 626 Phosphoglucomutase protein (AHRD V3.3 *** A0A2U1KZG8_ARTAN) AT5G51820 Solyc03g006880.3 23 22 34 127 21 36 9 34 15 18 27 37 68 49 14 gibberellin 20-oxidase-1 AT4G25420 Solyc03g006890.3 0 1 0 5 0 0 0 2 0 2 0 0 0 1 0 Protein kinase domain (AHRD V3.3 *** A0A200PMN1_9MAGN) Solyc03g006900.2 178 169 326 308 307 453 287 393 194 338 183 365 123 300 65 Protein kinase superfamily protein (AHRD V3.3 *** AT5G51800.1) AT5G51800 Solyc03g006903.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150100.1 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g006907.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g006910.3 6 18 0 0 27 19 30 23 91 126 146 67 40 2 13 bHLH transcription factor 019 AT4G25410 Solyc03g006915.1 12 1 12 23 1 10 11 7 11 2 5 15 0 11 8 Unknown protein Solyc03g006920.2 1300 841 1118 1110 964 1190 973 927 928 1058 1634 1075 891 849 1261 Receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3CW20_CAPCH) AT2G45590 Solyc03g006930.3 0 0 11 0 0 0 0 0 1 0 9 0 0 0 0 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1PQC9_ARTAN) Solyc03g006940.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A1P8BDH5_ARATH) AT5G51760 Solyc03g006950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1PQC9_ARTAN) AT5G51760 Solyc03g006960.4 280 289 246 218 309 204 254 241 262 194 190 224 289 230 183 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1PQC9_ARTAN) AT5G51760 Solyc03g006970.1 5315 6730 3503 5710 5316 4605 4182 5938 6990 7906 4536 7112 4036 4977 4310 serine protease SBT2 AT5G51750 Solyc03g006980.4 124 157 221 168 122 89 93 106 375 240 257 119 210 181 216 Alpha-L-fucosidase 1 (AHRD V3.3 *** A0A2G2X6A5_CAPBA) Solyc03g006990.1 73 121 103 95 95 134 70 96 91 73 79 98 140 135 96 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PMS4_9MAGN) Solyc03g007000.4 346 320 312 316 453 341 378 384 470 414 327 347 334 328 248 Peptidase M48 (AHRD V3.3 *** A0A200PMQ6_9MAGN) AT5G51740 Solyc03g007010.4 501 451 511 378 365 382 391 351 418 302 389 398 442 431 436 DEAD-box ATP-dependent RNA helicase 7 (AHRD V3.3 *** A0A2G3CVX4_CAPCH) AT5G62190 Solyc03g007030.3 69 425 112 205 454 452 429 383 250 156 122 225 189 145 188 CDGSH iron-sulfur domain-containing protein NEET (AHRD V3.3 *** A0A1U8HGA0_CAPAN) AT5G51720 Solyc03g007040.4 707 570 545 615 467 456 521 474 396 554 463 455 469 498 477 K(+) efflux antiporter 5 (AHRD V3.3 *** A0A2G2X685_CAPBA) AT5G51710 Solyc03g007050.3 2297 3562 4990 5380 4105 4842 3658 4600 3928 3935 3539 6062 1896 3846 2262 LRR receptor-like kinase family protein (AHRD V3.3 *** A0A072VP04_MEDTR) AT5G62230 Solyc03g007060.3 97 87 85 115 169 159 160 168 82 101 89 73 47 120 76 Cell cycle regulated microtubule associated protein (AHRD V3.3 *** A0A1P8B7D6_ARATH) Solyc03g007070.3 1371 744 668 620 717 692 574 748 627 988 589 730 572 697 627 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3 *** Q6U5H3_ROSHC) AT5G51690 Solyc03g007080.4 7 1 18 0 1 1 0 0 2 10 0 1 1 3 0 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* A0A2U1Q2A5_ARTAN) AT5G51680 Solyc03g007090.1 220 201 189 288 82 71 52 77 194 136 131 84 330 170 498 DUF668 domain-containing protein/DUF3475 domain-containing protein (AHRD V3.3 *** A0A1Q3B1U2_CEPFO) AT5G51670 Solyc03g007100.3 2590 2413 1977 1945 2191 2173 2289 2422 1994 2104 1637 2250 1899 2293 1931 Cleavage and polyadenylation specificity factor subunit 1 (AHRD V3.3 *** A0A1J3DYG9_NOCCA) AT5G51660 Solyc03g007110.3 748 1494 1790 1825 2001 1972 2306 1771 1123 1162 1896 1610 1342 1565 1239 Clp protease-related protein, chloroplastic (AHRD V3.3 *** A0A2G3CW03_CAPCH) AT4G25370 Solyc03g007120.3 1071 993 1136 991 1074 1138 1184 1119 1092 1006 1216 997 1180 1113 1462 Protein trichome birefringence-like 18 (AHRD V3.3 *** A0A2G3CVX7_CAPCH) AT4G25360 Solyc03g007130.4 152 1402 1299 2165 3666 3750 3661 4020 1664 828 1226 2156 232 941 965 65-kDa microtubule-associated protein 3 (AHRD V3.3 *** A0A2G2ZYR6_CAPAN),Pfam:PF03999 AT5G51600 Solyc03g007140.3 557 452 570 509 479 460 470 477 546 565 455 530 437 430 504 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3B6Y6_CEPFO) AT5G18000 Solyc03g007150.3 373 372 331 198 117 151 167 126 223 146 246 150 496 402 254 AT-hook motif nuclear-localized protein 1 (AHRD V3.3 *** A0A2G3CVX9_CAPCH) Solyc03g007160.1 0 0 1 1 2 3 10 0 1 0 0 0 0 0 0 Amine oxidase (AHRD V3.3 *-* A0A200PSW8_9MAGN) Solyc03g007170.3 933 1445 1580 892 1103 1300 1112 886 820 510 1104 877 1984 1557 1628 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G2X6E0_CAPBA) AT4G25340 Solyc03g007180.1 167 342 275 282 327 347 420 357 347 214 185 289 306 246 204 hypothetical protein (AHRD V3.3 *** AT1G62870.1) Solyc03g007190.3 368 379 361 357 272 265 268 307 391 439 373 302 500 349 467 Hypersensitive-induced response protein 1 (AHRD V3.3 *** A0A1U8G9S8_CAPAN) AT5G51570 Solyc03g007200.2 0 3 0 15 0 0 0 3 3 3 0 2 4 0 2 2-alkenal reductase (NADP(+)-dependent) (AHRD V3.3 *** A0A2G2WX40_CAPBA) Solyc03g007210.3 871 444 679 596 395 412 402 353 505 675 788 434 493 533 770 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3PPP5_TRIPR) Solyc03g007220.3 329 230 277 250 246 250 179 151 178 350 316 248 134 157 177 Membrane receptor-like protein 1 (AHRD V3.3 *-* B3TJG2_CAPAN) Solyc03g007230.4 7211 2456 3604 2417 684 805 603 533 2861 3436 3737 2786 1814 3371 5639 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1KYU0_ARTAN) Solyc03g007240.3 1058 4939 2854 4026 6355 7243 7476 5319 7089 6650 4690 9947 3948 5539 2045 spermine synthase,Pfam:PF01564 AT5G53120 Solyc03g007250.1 1074 450 800 405 176 232 221 184 409 693 562 263 605 483 575 Cyclic nucleotide gated channel 1 (AHRD V3.3 *-* A0A2U1KHS4_ARTAN) Solyc03g007260.3 827 410 403 247 156 161 138 196 388 675 241 306 462 345 238 Cyclic nucleotide-gated ion channel 1 (AHRD V3.3 *** A0A2G2X7E9_CAPBA) Solyc03g007270.3 978 880 764 967 1305 1330 1254 1267 849 913 914 832 763 859 1321 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1NPK1_ARTAN) AT5G53140 Solyc03g007280.4 429 641 493 465 549 640 496 463 435 342 400 462 455 513 382 DnaJ domain (AHRD V3.3 *-* A0A200R430_9MAGN) AT4G19580 Solyc03g007290.4 132 54 49 50 33 38 39 36 44 65 27 39 69 58 46 Trehalose 6-phosphate phosphatase (AHRD V3.3 *** A0A1U8G6V5_CAPAN) Solyc03g007310.3 821 468 494 592 457 523 507 421 613 785 779 467 605 426 519 Abscisic acid receptor PYL8 (AHRD V3.3 *** A0A2G3CWW8_CAPCH) AT5G53160 Solyc03g007320.4 1994 2042 1536 1759 1770 1630 1832 2172 1511 1769 1421 1618 2040 1701 1784 Polypyrimidine tract-binding protein-like protein 1 (AHRD V3.3 *** A0A2G3CWX3_CAPCH) AT5G53180 Solyc03g007330.3 562 809 637 652 702 718 737 797 841 580 587 692 699 826 750 ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *-* A0A2K8MFX7_9SPHN) AT5G53170 Solyc03g007340.4 72 51 46 65 54 83 90 63 71 100 73 124 115 70 110 polypyrimidine tract-binding-like protein (AHRD V3.3 *** AT5G24130.1) AT5G24130 Solyc03g007350.1 54 76 70 108 47 76 59 80 80 47 56 82 116 83 57 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QLX8_9MAGN) Solyc03g007360.3 12 18 40 75 3 5 9 2 10 10 23 4 16 14 126 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVG4_SOLTU) AT5G53190 Solyc03g007370.3 792 589 68 334 476 450 512 502 358 601 30 226 351 30 106 Sigma factor (AHRD V3.3 *** A0A0G2STU5_9ROSI) AT5G24120 Solyc03g007380.2 24 2 3 3 0 0 0 0 2 3 24 4 2 12 0 WRKY transcription factor 52 Solyc03g007390.4 120 112 92 152 147 175 160 146 172 163 53 175 101 148 71 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2X703_CAPBA) AT5G40400 Solyc03g007400.2 70 63 107 134 93 95 78 53 80 80 109 66 60 75 108 Unknown protein Solyc03g007410.4 243 1131 592 883 230 265 336 370 1618 717 695 480 896 667 406 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A1P8BE01_ARATH) AT5G53210 Solyc03g007420.3 625 407 433 459 364 491 442 422 437 433 302 399 477 478 493 hypothetical protein (AHRD V3.3 *-* AT5G53220.7) Solyc03g007430.3 758 613 443 494 413 444 431 407 375 390 318 349 592 435 607 Mitochondrial carrier protein MTM1 (AHRD V3.3 *** A0A2G2X7K2_CAPBA) AT4G27940 Solyc03g007440.4 1031 894 881 759 874 991 802 673 618 581 722 574 1067 921 773 Plastid division protein PDV1 (AHRD V3.3 *-* A0A2I0XAI8_9ASPA) AT5G53280 Solyc03g007450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g007460.3 109 141 150 133 114 180 134 121 161 82 95 153 247 205 141 Solanum lycopersicum Cytokinin Response Factor 4 AT5G53290 Solyc03g007470.4 603 1034 1494 1230 1894 2163 1932 1589 1256 1339 1692 1296 1092 1067 1625 Ubiquitin conjugating enzyme (AHRD V3.3 *** B3TLN8_ELAGV) AT4G27960 Solyc03g007480.3 1631 882 1576 965 924 1065 997 849 783 1049 1238 913 778 803 1397 myosin IB heavy chain (AHRD V3.3 *** A0A2I4H7G9_9ROSI) AT5G53310 Solyc03g007485.1 229 635 563 774 825 902 907 828 722 625 772 887 573 528 659 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A061G0Q5_THECC) Solyc03g007490.3 449 323 359 359 316 350 336 299 354 230 344 337 335 345 288 Cytochrome c oxidase assembly protein COX16 (AHRD V3.3 *-* A0A2U1MEP7_ARTAN) AT4G14145 Solyc03g007500.4 666 881 620 618 847 930 882 607 518 318 602 578 1014 868 688 Plastid division protein PDV1 (AHRD V3.3 *-* A0A2I0XAI8_9ASPA) AT5G53280 Solyc03g007510.4 220 246 207 265 197 283 237 201 203 192 283 155 196 170 197 HAT transposon superfamily (AHRD V3.3 *** A0A2U1Q846_ARTAN) AT1G79740 Solyc03g007520.3 2854 1979 1934 1779 2001 1757 1535 2119 2040 2515 2182 2150 2195 1800 2567 Ubiquitin-associated/translation elongation factor EF1B protein (AHRD V3.3 *** AT5G53330.1) AT5G53330 Solyc03g007530.3 2098 2018 1175 1167 991 1002 1080 1116 1455 2461 1110 1102 3986 2011 1961 ABC transporter C family member 10 (AHRD V3.3 *** A0A2G2ZZN1_CAPAN) AT3G59140 Solyc03g007540.3 92 172 203 204 181 193 199 178 153 141 130 115 169 200 151 tRNA dimethylallyltransferase (AHRD V3.3 *** AT5G52960.1) AT5G52960 Solyc03g007550.4 68 347 310 365 514 612 515 644 382 289 360 563 100 386 127 LIM domain protein (AHRD V3.3 *** AT5G52950.1) AT5G52950 Solyc03g007560.2 76 46 60 54 86 114 118 93 54 38 45 39 67 57 56 Crooked neck-like protein 1 (AHRD V3.3 *** A0A2G2Y8B4_CAPAN) Solyc03g007570.2 3 0 2 1 0 2 1 0 0 1 1 0 1 0 0 DUF21 domain-containing protein (AHRD V3.3 *** A0A2G3CWN9_CAPCH) AT5G52790 Solyc03g007590.4 344 395 513 433 612 731 652 608 549 396 457 558 316 464 354 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** A0A2U1LU47_ARTAN) AT3G49140 Solyc03g007600.3 511 368 563 458 358 436 441 314 515 430 516 440 405 468 571 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8G739_CAPAN) AT4G21190 Solyc03g007610.4 941 1673 1500 1322 1633 1629 1409 1973 2390 1577 1368 1940 1819 1954 1290 DnaJ protein ERDJ2A (AHRD V3.3 *** A0A2G3CWQ2_CAPCH) Solyc03g007620.3 685 533 486 484 479 420 424 449 476 475 401 475 508 536 521 Tic22-like (AHRD V3.3 *** A0A200R2J9_9MAGN) AT5G62650 Solyc03g007640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 68 Solyc03g007660.4 652 820 1124 1022 1208 1522 1456 1009 1005 769 1151 862 1142 1012 1239 NADH-ubiquinone oxidoreductase-related protein (AHRD V3.3 *** A0A2U1N0L6_ARTAN) AT5G52840 Solyc03g007670.4 2442 2100 1361 1109 1607 1258 1255 1648 1898 1728 1205 1651 2243 1668 1398 defense signal transduction Sgt1-2 AT4G11260 Solyc03g007680.3 404 483 487 527 577 599 652 587 567 554 536 539 472 516 540 trafficking protein particle complex subunit 1-like (AHRD V3.3 *** A0A2I4HAB0_9ROSI) AT1G51160 Solyc03g007690.1 133 1878 575 1326 4884 3800 3467 5320 1132 866 634 1988 507 1185 236 ABC transporter G family member 8 (AHRD V3.3 *** A0A2G2ZZJ3_CAPAN) AT5G52860 Solyc03g007700.1 97 172 417 277 452 521 379 450 330 212 265 300 239 352 166 membrane-associated kinase regulator (AHRD V3.3 *** AT5G52870.1) AT5G52870 Solyc03g007710.3 89 99 225 144 164 172 176 178 201 112 127 131 139 130 102 membrane-associated kinase regulator (AHRD V3.3 *** AT5G52870.2) AT5G52870 Solyc03g007720.3 52 126 236 101 89 75 84 80 99 86 156 104 103 100 124 membrane-associated kinase regulator (AHRD V3.3 *-* AT1G64080.1) AT5G52870 Solyc03g007730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *** G5CV49_SOLLC) Solyc03g007740.3 8007 7831 5739 6168 5730 5847 5419 5654 4624 5829 5673 6709 6247 6111 7086 Reticulon-like protein (AHRD V3.3 *** A0A2G3CWR7_CAPCH) Solyc03g007750.3 278 213 274 259 241 231 225 258 257 273 309 324 295 209 271 F-box protein At5g52880 (AHRD V3.3 *** A0A2I4G3R7_9ROSI) AT5G52880 Solyc03g007760.3 361 971 594 1037 1001 718 716 884 574 515 575 388 1029 612 1431 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** F4JKF8_ARATH) AT5G52882 Solyc03g007770.3 261 403 1348 577 117 91 106 78 750 503 1232 206 662 308 302 S-type anion channel SLAH3 (AHRD V3.3 *** A0A2G2X6S2_CAPBA) AT5G24030 Solyc03g007775.2 5 7 1 1 7 2 6 5 1 0 3 5 5 1 0 membrane-associated kinase regulator (AHRD V3.3 *** AT5G52900.1) AT5G52900 Solyc03g007780.1 0 2 0 0 0 0 0 0 1 1 0 0 0 4 0 Ovule Secreted Protein Solyc03g007790.3 33 16 22 12 0 0 0 4 59 7 20 5 4 21 225 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3CWU6_CAPCH) AT5G24080 Solyc03g007800.3 84 487 528 379 705 647 728 752 524 283 410 432 321 627 148 Timeless protein (AHRD V3.3 *** A0A200R1E1_9MAGN) AT5G52910 Solyc03g007810.3 2682 3640 2841 3118 4669 4563 4685 5359 3408 3393 2573 3986 3119 3214 2715 Pyruvate kinase (AHRD V3.3 *** A0A2G3CWU0_CAPCH) AT5G52920 Solyc03g007820.3 36 5 16 13 12 23 11 14 9 15 43 21 11 12 31 Unknown protein Solyc03g007830.3 276 573 922 1036 1171 1136 1213 977 634 748 939 773 590 666 605 CURVATURE THYLAKOID chloroplastic (AHRD V3.3 *-* A0A2P6VPW9_9CHLO) Solyc03g007840.1 32 49 22 31 31 30 29 31 38 25 12 43 80 42 29 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PUJ6_9MAGN) AT3G49142 Solyc03g007850.1 36 15 12 34 12 25 19 25 21 13 17 11 43 26 20 Crooked neck-like protein 1 (AHRD V3.3 *** A0A2G2Y8B4_CAPAN) AT5G41770 Solyc03g007860.1 35 101 176 120 101 133 124 125 147 73 134 94 100 85 119 Protein PAM68, chloroplastic (AHRD V3.3 *** A0A2G2YAA0_CAPAN) AT5G52780 Solyc03g007870.3 3384 1289 2510 986 280 273 271 193 742 998 4867 653 1812 1310 1912 heavy metal-associated isoprenylated plant protein 3-like (AHRD V3.3 *** A0A1U8G733_CAPAN) AT5G52740 Solyc03g007880.3 25 30 123 105 78 104 74 63 64 65 44 169 19 46 25 Serine-rich adhesin for platelets-like protein (AHRD V3.3 *-* A0A2K3PD15_TRIPR) Solyc03g007890.3 322 177 151 111 183 189 169 195 202 98 89 215 125 153 97 class 2 small heat shock protein Le-HSP17.6 AT5G52640 Solyc03g007900.3 478 428 484 442 353 348 388 370 336 438 392 400 459 410 456 Glutaminyl-peptide cyclotransferase (AHRD V3.3 *** A0A1U8FZ85_CAPAN) AT4G25720 Solyc03g007910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1NZX1_ARTAN) Solyc03g007920.4 964 1217 1526 1398 1445 1490 1363 1320 2847 2881 3384 2455 2357 1521 1600 Glutaminyl-peptide cyclotransferase (AHRD V3.3 *** A0A1U8FZB4_CAPAN) AT4G25720 Solyc03g007930.4 31 39 82 74 40 38 36 23 71 64 123 36 88 87 84 Unknown protein Solyc03g007940.4 0 2 0 2 0 0 0 0 0 0 0 0 0 2 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** O81746_ARATH) Solyc03g007950.3 9 0 0 0 0 0 0 0 0 3 6 0 6 9 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** O81746_ARATH) Solyc03g007960.3 1741 567 524 600 16 1 13 4 333 803 743 194 106 541 1134 beta-carotene hydroxylase-2 AT4G25700 Solyc03g007970.2 270 256 240 255 321 289 323 342 240 253 250 296 193 208 527 UDP-N-acetylmuramate--L-alanine ligase (AHRD V3.3 *** A8KZ98_FRASN) Solyc03g007980.1 509 765 519 839 805 609 685 871 600 699 497 747 606 720 348 Site-determining protein (AHRD V3.3 *** A0A2I4HG12_9ROSI) AT5G24020 Solyc03g007990.2 953 611 596 675 675 666 588 706 731 777 608 613 602 720 784 Unknown protein AT5G52552 Solyc03g008010.3 662 762 1405 953 1017 1074 1041 897 802 869 1196 903 673 802 701 PPPDE putative thiol peptidase family protein (AHRD V3.3 *** A0A2U1P9D8_ARTAN) AT4G25660 Solyc03g008013.1 0 5 0 0 0 0 1 0 0 0 0 0 0 0 0 Ferric reduction oxidase 5 (AHRD V3.3 *** A0A2G2ZZI0_CAPAN) AT5G23980 Solyc03g008015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Ferric reduction oxidase 5 (AHRD V3.3 *** A0A2G2ZZI0_CAPAN) AT5G23980 Solyc03g008017.1 2 0 0 0 10 1 1 0 0 0 1 0 0 1 0 Unknown protein Solyc03g025100.1 1 1 2 0 3 3 2 1 0 1 0 0 0 3 0 Unknown protein Solyc03g025110.1 0 0 9 11 0 1 3 4 3 0 4 0 3 1 0 Unknown protein Solyc03g025113.1 0 3 0 7 0 1 6 2 0 1 3 0 0 1 4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) ATMG00240 Solyc03g025117.1 11 10 24 18 7 24 36 8 19 6 4 13 16 17 7 Eukaryotic translation initiation factor 4G (AHRD V3.3 *-* A0A2G3AM37_CAPAN) Solyc03g025120.1 1 8 12 9 10 13 14 8 4 8 5 20 8 1 0 Unknown protein Solyc03g025125.1 45 29 19 36 54 23 34 29 52 34 16 35 27 24 21 Unknown protein Solyc03g025130.1 4 18 0 4 9 15 4 11 9 8 4 9 6 3 6 Unknown protein Solyc03g025140.1 58 64 66 54 85 88 75 30 48 53 81 65 57 65 70 Unknown protein Solyc03g025150.4 1891 1322 1251 1224 1039 1287 1281 1096 1330 1122 1334 1051 1111 1388 1586 Unknown protein AT5G52530 Solyc03g025160.4 565 958 752 1065 1560 1551 1630 1918 954 700 773 1465 471 764 547 protein PATRONUS 2 (AHRD V3.3 *** XP_011084447.1) Solyc03g025170.1 3890 3612 3570 3158 3592 3126 2819 3646 3603 3706 3397 4077 4852 3273 3263 gras10 AT5G52510 Solyc03g025180.2 6 3 23 7 13 16 3 1 4 3 0 0 5 0 11 Unknown protein Solyc03g025190.4 65 377 220 112 190 147 181 260 618 237 93 596 714 480 742 anthocyanin permease AT4G25640 Solyc03g025200.3 54 288 142 160 291 307 263 351 361 300 223 319 230 294 100 Protein DETOXIFICATION (AHRD V3.3 *** Q6V7U8_SOLLC) Solyc03g025210.3 0 0 2 8 0 1 2 1 0 0 0 0 6 3 32 Protein DETOXIFICATION (AHRD V3.3 *** A0A328E0F4_9ASTE) Solyc03g025220.3 35 65 123 105 90 96 98 98 72 76 71 132 83 108 85 Protein DETOXIFICATION (AHRD V3.3 *** Q6V7U8_SOLLC) Solyc03g025230.3 303 1288 1825 1507 2622 3271 3037 2931 1160 733 1333 1782 1127 1636 847 Protein DETOXIFICATION (AHRD V3.3 *** Q6V7U8_SOLLC) Solyc03g025240.3 1 3 1 0 2 10 7 4 1 3 0 7 1 0 0 Protein DETOXIFICATION (AHRD V3.3 *** Q6V7U8_SOLLC) Solyc03g025250.4 9 16 4 14 19 20 17 20 21 11 12 28 23 9 7 Protein DETOXIFICATION (AHRD V3.3 *** A0A328E0F4_9ASTE) AT4G25640 Solyc03g025260.1 20 5 43 11 10 9 5 0 8 10 22 5 16 17 33 DWNN domain, a CCHC-type zinc finger (AHRD V3.3 *-* A0A2U1LZ01_ARTAN) Solyc03g025270.3 2357 3526 3005 1891 2013 1784 2017 1938 1426 1547 1520 1866 4591 3991 2663 Fibrillarin (AHRD V3.3 *** A0A200R7Z1_9MAGN) AT4G25630 Solyc03g025280.4 1982 2122 1766 1651 1991 2274 2231 2247 2081 1635 1509 1812 2197 2274 1780 RNA recognition motif (RRM)-containing protein (AHRD V3.3 *** A0A1P8BCT5_ARATH) AT5G25060 Solyc03g025290.3 915 567 553 1174 275 423 436 478 685 947 1076 439 474 465 971 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** B6SWF0_MAIZE) AT4G25620 Solyc03g025310.3 533 1004 1364 1229 1414 1292 1364 1177 1134 856 963 1183 1080 1099 1136 Sec-independent protein translocase protein TATB, chloroplastic (AHRD V3.3 *** A0A2G2ZZB6_CAPAN) AT5G52440 Solyc03g025320.4 3157 4519 3672 3624 3355 3410 2484 3559 5014 3689 3722 4675 4364 4124 2579 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1MK89_ARTAN) AT5G23940 Solyc03g025330.4 68 45 26 25 24 29 35 15 29 77 111 38 12 16 39 Transmembrane protein, putative (DUF677) (AHRD V3.3 *** A0A1I9LNT4_ARATH) AT3G49070 Solyc03g025340.1 3770 3395 3432 2933 4228 3741 3943 5095 3357 4173 3502 4150 2688 2729 2654 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* A0A2U1LCI8_ARTAN) AT5G23950 Solyc03g025350.3 30 17 20 19 8 7 3 3 4 10 15 12 14 4 15 Transporter arsB (AHRD V3.3 *** A0A2U1Q5Y3_ARTAN) AT1G02260 Solyc03g025360.3 1642 1616 1696 1597 1475 1591 1771 1703 1616 1717 1395 1407 1339 1635 1543 MAP kinase kinase kinase 26 AT1G63700 Solyc03g025370.3 79 227 327 244 435 416 480 504 352 247 263 410 152 213 244 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q8H1Q6_ARATH) Solyc03g025380.3 131 151 216 136 164 223 176 156 535 171 152 125 152 146 305 Peroxidase (AHRD V3.3 *** K4BF11_SOLLC) Solyc03g025390.3 277 1219 481 691 904 678 641 684 2804 2060 1865 3122 1061 1240 865 Short-chain dehydrogenase TIC 32, chloroplastic (AHRD V3.3 *** A0A2G2X6Q5_CAPBA) AT4G23430 Solyc03g025400.3 381 327 375 364 425 442 442 363 355 334 416 401 312 376 330 Short-chain dehydrogenase TIC 32, chloroplastic (AHRD V3.3 *** A0A2G2X783_CAPBA) AT4G23430 Solyc03g025410.4 715 836 771 812 943 875 854 1171 1121 989 785 985 733 574 698 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q8H1Q6_ARATH) AT4G23430 Solyc03g025420.3 1288 884 889 783 681 985 741 739 641 767 1336 777 809 878 1320 SKP1-like protein 21 (AHRD V3.3 *** A0A2G2ZZ74_CAPAN) AT3G61415 Solyc03g025430.1 345 167 47 123 159 146 165 144 103 204 56 174 63 142 320 Transmembrane protein (AHRD V3.3 *** Q9FHB8_ARATH) AT5G52420 Solyc03g025440.3 1369 1023 937 793 682 740 698 573 697 913 974 801 972 975 1008 Zinc finger, C2H2 (AHRD V3.3 *** A0A2U1N734_ARTAN) AT4G25610 Solyc03g025450.4 608 434 460 382 311 390 361 250 394 375 437 251 420 423 546 Protein kinase domain (AHRD V3.3 *** A0A200QU61_9MAGN) AT3G49060 Solyc03g025460.3 6 16 4 3 13 19 27 10 15 8 8 2 3 5 10 ATP-binding protein (AHRD V3.3 *** AT3G49055.1) AT3G49055 Solyc03g025470.4 91 685 484 668 1225 1135 1113 1561 750 454 505 881 169 389 264 Kinesin-like protein (AHRD V3.3 *** E5GCU2_CUCME) AT5G23910 Solyc03g025480.4 212 232 384 282 432 535 417 285 210 193 347 253 182 285 322 BnaA06g16230D protein (AHRD V3.3 *-* A0A078F8M8_BRANA) Solyc03g025490.3 0 0 2 0 0 0 0 0 4 0 11 0 0 0 1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MKA4_ARTAN) AT4G23340 Solyc03g025500.4 158 145 184 159 175 145 143 133 126 124 115 138 164 163 179 Oxoglutarate/iron-dependent oxygenase (AHRD V3.3 *** A0A2U1MXV6_ARTAN) AT4G25600 Solyc03g025510.3 1043 631 680 493 555 524 509 475 626 597 596 496 632 600 598 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MXT7_ARTAN) AT3G49050 Solyc03g025520.4 3494 8211 8314 5327 7358 6699 6418 6538 5554 4011 6444 5464 11528 9219 7590 60S ribosomal protein L36 (AHRD V3.3 *-* A0A2G2Z8V1_CAPAN) AT3G53740 Solyc03g025530.3 1786 2161 1827 1819 2166 2207 2216 2553 2656 1805 1813 1983 1951 2272 2507 oxidoreductase/transition metal ion-binding protein (AHRD V3.3 *** AT5G52410.3) AT5G23890 Solyc03g025540.3 1064 1445 886 821 1084 941 976 1222 806 956 547 1060 1133 1201 781 Cleavage and polyadenylation specificity factor subunit 2 (AHRD V3.3 *** A0A1U8FZM0_CAPAN) AT5G23880 Solyc03g025550.3 799 798 945 976 906 837 794 884 1019 1083 800 895 936 775 864 Signal peptide peptidase-like 1 (AHRD V3.3 *** A0A2G2X6N2_CAPBA) AT4G33410 Solyc03g025560.4 96 149 136 154 166 94 134 121 137 150 102 127 162 146 198 Alkyl transferase (AHRD V3.3 *** K7WCI9_SOLLC) AT2G17570 Solyc03g025570.2 0 0 3 1 0 0 0 0 1 0 0 0 0 0 0 DNA-directed RNA polymerase, RPB5 subunit (AHRD V3.3 *** A0A2U1MFI7_ARTAN) Solyc03g025580.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Pectin acetylesterase (AHRD V3.3 *** K4BF31_SOLLC) Solyc03g025600.3 626 565 1079 1035 818 1099 1317 661 843 558 1094 818 613 838 1189 Pectin acetylesterase (AHRD V3.3 *** K4BF33_SOLLC) AT5G23870 Solyc03g025610.3 365 794 372 417 744 587 672 1077 1083 684 404 855 474 708 568 Tripeptidyl-peptidase 2 (AHRD V3.3 *-* A0A2G3CWH4_CAPCH) Solyc03g025630.3 738 1126 1456 1419 1359 1566 1924 1302 1307 881 1453 1138 1047 1415 1710 Tripeptidyl-peptidase 2 (AHRD V3.3 *-* A0A2G3CWH4_CAPCH) Solyc03g025640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** I6YHZ8_LINUS) AT5G52400 Solyc03g025645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A2G2ZZ62_CAPAN) AT5G20340 Solyc03g025650.2 0 1 0 0 4 6 5 5 16 17 4 22 12 14 0 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A2G2ZZ62_CAPAN) AT5G20340 Solyc03g025660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility protein S1 family (AHRD V3.3 *** A0A2U1P1N3_ARTAN) AT4G24974 Solyc03g025670.3 108 152 61 98 10 4 1 5 98 119 248 42 189 284 136 PAR1 (AHRD V3.3 *** A0A2U1P9T7_ARTAN) AT5G52390 Solyc03g025680.3 92 58 101 66 2 6 8 7 27 32 79 33 70 147 136 PAR1 (AHRD V3.3 *** A0A2U1P9T7_ARTAN) AT5G52390 Solyc03g025690.4 67 60 90 104 69 69 64 59 46 45 50 58 80 86 134 plastid transcriptionally active protein (AHRD V3.3 *** AT1G75125.1) Solyc03g025700.2 56 89 70 34 32 33 29 31 51 41 30 84 95 79 80 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2X6K3_CAPBA) AT4G25270 Solyc03g025710.3 211 203 26 207 515 428 409 427 151 193 9 104 108 23 23 Acyl-CoA N-acyltransferase (NAT) superfamily protein (AHRD V3.3 *** A0A2K3PIZ7_TRIPR) AT1G72030 Solyc03g025720.3 531 398 112 216 254 143 151 178 218 363 109 132 268 155 163 Oxalate--CoA ligase (AHRD V3.3 *** A0A2G2X724_CAPBA) AT3G48990 Solyc03g025730.3 508 850 710 604 661 683 672 700 613 589 739 622 768 673 535 Tubulin beta chain (AHRD V3.3 *** A0A1U8FRZ9_CAPAN) Solyc03g025740.4 293 501 533 286 380 323 334 314 260 152 376 316 598 576 421 Zf-CCHC domain-containing protein/Cofilin_ADF domain-containing protein (AHRD V3.3 *** A0A1Q3D772_CEPFO) AT5G52380 Solyc03g025750.4 0 2 4 0 0 0 1 0 0 0 0 0 0 0 0 Actin-depolymerizing factor (AHRD V3.3 *** A0A2G2Z908_CAPAN) AT5G52360 Solyc03g025760.4 78 129 144 79 126 147 156 128 199 161 96 39 242 105 91 O-glucosyltransferase rumi homolog (AHRD V3.3 *** A0A2I4FGK6_9ROSI) AT5G23850 Solyc03g025770.4 9 6 9 9 0 2 1 0 3 8 23 4 5 5 1 O-glucosyltransferase rumi homolog (AHRD V3.3 *** A0A2I4FGK6_9ROSI) AT5G23850 Solyc03g025780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 O-glucosyltransferase rumi homolog (AHRD V3.3 *** A0A2I4FGK6_9ROSI) Solyc03g025790.4 19 149 204 277 335 313 284 302 227 55 205 195 71 231 134 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6PM91_ACTCH) AT3G48970 Solyc03g025800.3 91 138 233 234 139 165 161 180 200 79 200 91 230 192 346 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6RWA7_ACTCH) AT5G23760 Solyc03g025810.4 98 11 6 11 0 0 0 0 11 86 16 14 0 177 512 Low-temperature-induced 65 kDa protein (AHRD V3.3 *-* LTI65_ARATH) AT4G25580 Solyc03g025820.3 78 129 114 115 188 123 142 125 104 80 101 135 57 159 76 shortage in chiasmata 1 (AHRD V3.3 *** AT5G52290.1) AT5G52290 Solyc03g025830.4 426 394 810 535 172 225 198 122 764 402 1353 335 595 642 938 Myosin heavy chain-related protein (AHRD V3.3 *** Q9C8T4_ARATH) AT5G52280 Solyc03g025840.3 939 636 770 578 705 614 641 693 748 879 902 790 642 713 815 Cytochrome b561/ferric reductase transmembrane protein family (AHRD V3.3 *** A0A178UZ09_ARATH) AT4G25570 Solyc03g025850.3 640 543 762 513 439 410 436 412 761 502 902 641 485 631 1085 remorin 1 AT5G23750 Solyc03g025860.3 60 20 29 44 13 35 25 13 15 18 40 10 50 33 8 25.3 kDa vesicle transport protein (AHRD V3.3 *** A0A2U1P9C4_ARTAN) AT5G52270 Solyc03g025870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 R2R3MYB transcription factor 19 AT5G52260 Solyc03g025880.3 611 518 671 499 499 453 448 522 445 460 488 435 715 541 642 Cleavage and polyadenylation specificity factor subunit 5 (AHRD V3.3 *** A0A1U8G7I4_CAPAN) AT4G25550 Solyc03g025890.2 1866 1266 1087 1556 1471 1470 1767 1827 947 1802 830 1238 1132 1362 1026 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200QUI6_9MAGN) AT4G25540 Solyc03g025900.3 191 346 351 421 595 626 629 516 341 318 386 448 229 349 323 Flap endonuclease GEN-like 2 (AHRD V3.3 *** A0A2G2X6K0_CAPBA) AT3G48900 Solyc03g025910.3 720 1204 1911 1782 1398 1834 2057 1525 1240 1090 1641 1256 1682 1699 1791 transmembrane protein (AHRD V3.3 *** AT4G00585.1) AT4G00585 Solyc03g025920.4 275 224 296 303 302 256 286 300 269 322 204 340 277 229 232 F-box/LRR-repeat protein (AHRD V3.3 *** A0A1U8G7I8_CAPAN) AT3G48880 Solyc03g150102.1 260 168 134 93 109 118 111 94 102 125 93 121 148 166 106 membrane steroid-binding protein 1 (AHRD V3.3 --* XP_004234379.1) Solyc03g150103.1 66 43 24 66 41 15 27 27 27 35 22 25 37 40 21 Unknown protein Solyc03g150104.1 736 305 260 321 225 208 226 177 185 295 214 214 272 277 296 Unknown protein Solyc03g025930.4 284 197 216 193 182 272 228 148 195 198 216 219 162 226 282 F-box/LRR-repeat protein (AHRD V3.3 *** A0A1U8G7I8_CAPAN) Solyc03g025940.3 916 488 893 589 447 514 466 430 461 687 788 438 560 602 812 F-box/LRR-repeat protein (AHRD V3.3 *** A0A1U8G7I8_CAPAN) AT3G48880 Solyc03g025950.4 4351 1966 2055 1591 1240 1365 1140 1232 1950 2326 2301 1714 1994 1751 2150 Membrane steroid-binding protein (AHRD V3.3 *** G5DXK7_SILLA) AT3G48890 Solyc03g025960.1 37 4 20 33 26 16 16 9 7 6 16 32 8 20 8 Unknown protein Solyc03g025970.3 997 545 539 524 591 583 531 530 959 720 746 742 423 564 755 Methyl-CpG binding domain protein (AHRD V3.3 *-* A0A2K3NPJ5_TRIPR) Solyc03g025980.3 1087 612 702 703 423 610 575 494 486 652 667 547 612 667 741 Protein phosphatase inhibitor 2-like (AHRD V3.3 *** A0A2K3NNM1_TRIPR) AT5G52200 Solyc03g025990.1 263 214 239 273 230 228 170 209 170 153 174 189 242 218 273 6-phospho-3-hexuloisomerase (AHRD V3.3 *** A0A2P8I231_9PSEU) AT5G52190 Solyc03g026000.4 107 11 177 172 32 23 19 25 143 83 292 236 121 155 114 bromodomain-containing protein DDB_G0271118-like (AHRD V3.3 *** XP_021765153.1) Solyc03g026010.3 205 211 286 253 297 423 353 293 188 271 207 255 277 304 218 transmembrane protein 161AB protein (AHRD V3.3 *** AT5G52180.1) AT5G52180 Solyc03g026015.1 11 3 10 6 13 16 10 12 3 8 3 6 9 4 23 Unknown protein Solyc03g026020.3 10572 4652 3733 3356 1553 1614 1335 1368 2216 3883 3360 2435 2465 3312 3924 Heat shock transcription factor (AHRD V3.3 *** E1U3C8_CICAR) Solyc03g026030.1 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q9M144_ARATH) AT3G05390 Solyc03g026040.4 519 1021 1601 1110 1687 1676 1458 1917 2123 1575 1068 2324 1356 1566 708 Leucine-rich repeat receptor protein kinase (AHRD V3.3 *** A0A2R6RQU4_ACTCH) AT5G07280 Solyc03g026050.3 10 2 21 0 0 1 3 0 2 6 7 0 11 2 20 Terminal flower 1 (AHRD V3.3 *** F7J0V7_GENTR) AT5G62040 Solyc03g026060.3 875 864 753 751 901 824 822 827 715 833 752 726 944 799 731 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1MVN7_ARTAN) AT5G07270 Solyc03g026070.4 284 423 433 342 262 318 314 340 394 365 386 422 342 410 278 Homeobox-leucine zipper protein ROC5 (AHRD V3.3 *** A0A2G2X6G6_CAPBA) Solyc03g026080.3 126 80 27 51 22 31 20 19 42 82 20 37 98 42 46 Rhomboid-like protein (AHRD V3.3 *** A0A2G2X6Z4_CAPBA) AT1G63120 Solyc03g026090.4 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A164YT40_DAUCA) AT5G62065 Solyc03g026100.1 379 227 142 208 134 121 151 131 156 269 158 196 159 203 226 tRNA-specific adenosine deaminase TAD3 (AHRD V3.3 *** TAD3_ARATH) AT5G24670 Solyc03g026110.4 1418 1611 1272 1232 1729 1668 1911 1481 2002 1215 1654 1196 1589 1142 1331 SUN-like protein 8 AT5G62070 Solyc03g026115.1 0 0 0 2 5 2 1 4 0 0 0 0 3 1 0 Stamen-specific protein FIL1 (AHRD V3.3 *** A0A2G2ZYZ1_CAPAN) AT5G52160 Solyc03g026120.3 2 16 19 29 2 8 0 0 13 2 4 5 12 14 8 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1NM08_ARTAN) Solyc03g026130.3 51 17 21 28 5 10 15 4 27 33 11 24 38 16 21 Cytochrome P450 (AHRD V3.3 *** A0A2U1KE50_ARTAN) Solyc03g026140.4 84 86 114 50 23 40 24 19 37 72 38 41 57 65 76 Cytochrome P450 (AHRD V3.3 *** A0A2U1KE50_ARTAN) Solyc03g026150.3 660 764 1141 1173 806 898 767 673 920 933 1235 820 751 949 1213 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1NQN4_ARTAN) Solyc03g026160.4 32 37 29 49 6 28 18 10 61 54 153 51 46 32 58 F-box protein PP2-A13 (AHRD V3.3 *** A0A2G3CW98_CAPCH) Solyc03g026170.4 1070 430 346 367 332 315 301 289 429 742 658 485 346 391 500 F-box family protein (AHRD V3.3 *** A0A2U1QK66_ARTAN) AT4G00755 Solyc03g026180.1 713 417 465 499 414 534 412 412 330 363 396 429 357 499 450 Unknown protein Solyc03g026190.3 1667 1176 794 764 1227 1008 917 1436 1244 1626 735 1274 937 1141 818 Transcriptional corepressor SEUSS (AHRD V3.3 *-* A0A2I0WPA8_9ASPA) AT5G62090 Solyc03g026200.4 229 157 137 143 132 138 122 141 98 187 130 120 53 86 155 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic (AHRD V3.3 *** A0A2I4GK97_9ROSI) AT5G52110 Solyc03g026210.4 230 212 1062 614 257 259 255 122 305 294 2292 251 261 386 1501 Dihydrodipicolinate reductase-like protein (AHRD V3.3 *** A0A0F7GZT6_9ROSI) AT5G52100 Solyc03g026220.3 2233 2511 5919 3877 2239 2552 2328 2557 4731 4166 8852 2513 3323 2099 3989 BAG family molecular chaperone regulator 1 (AHRD V3.3 *** A0A2G2ZYV9_CAPAN) AT5G52060 Solyc03g026230.1 114 127 150 72 58 41 34 43 44 229 342 29 147 90 50 Protein DETOXIFICATION (AHRD V3.3 *** A0A1Q3B1C8_CEPFO) AT4G23030 Solyc03g026240.4 1657 990 1004 817 601 728 825 540 787 683 1043 816 717 1002 1134 Serine/arginine-rich-splicing factor RS40 (AHRD V3.3 *** A0A0M8KTC1_NICAT) AT5G52040 Solyc03g026250.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* A0A0K9QUN4_SPIOL) Solyc03g026260.3 207 287 427 464 219 176 164 170 248 326 259 208 184 281 223 TraB family protein (AHRD V3.3 *** A0A2U1PQE1_ARTAN) AT5G52030 Solyc03g026270.3 10 10 30 1 0 0 0 0 0 4 80 5 4 8 9 CRT binding factor 3 (AHRD V3.3 *** B3TPP7_SOLPI) AT4G25480 Solyc03g026280.3 246 194 182 11 0 0 0 0 3 8 1002 106 74 105 295 C-repeat binding factor 1 AT4G25480 Solyc03g124110.2 95 91 204 7 0 0 0 0 0 15 595 68 24 27 193 Dehydration-responsive element-binding transcription factor (AHRD V3.3 *** A0A1S6M2D0_9CARY) AT4G25480 Solyc03g026290.3 462 658 934 809 1063 1227 1329 1148 712 786 953 1188 833 791 626 Per1-like (AHRD V3.3 *** A0A200PW77_9MAGN) AT1G16560 Solyc03g026300.4 853 766 822 808 773 994 998 868 713 912 828 960 859 895 685 Per1-like (AHRD V3.3 *** A0A200PW77_9MAGN) AT1G16560 Solyc03g026310.4 752 540 400 450 371 435 460 457 563 503 356 421 399 507 436 ABC transporter (AHRD V3.3 *** A0A200R0A6_9MAGN) AT4G25450 Solyc03g026320.4 287 226 277 338 207 219 251 174 176 188 438 196 258 274 333 Unknown protein Solyc03g026330.4 82 108 17 71 107 123 133 111 84 140 16 122 88 22 19 ATP-dependent Clp protease ATP-binding subunit (AHRD V3.3 *-* AT5G62140.1) AT5G62140 Solyc03g026340.4 4903 3032 3042 2970 4190 4428 4123 3956 2342 3421 2865 3440 2179 2457 2397 Calcium-dependent protein kinase 4 (AHRD V3.3 *** A0A2G2ZYX8_CAPAN) AT1G12580 Solyc03g026350.3 791 790 843 838 836 907 880 838 828 771 687 933 905 812 711 Zinc finger transcription factor 24 AT4G25440 Solyc03g026360.1 11 10 18 12 11 15 23 23 35 16 7 8 13 8 9 Peptidoglycan-binding LysM domain-containing protein (AHRD V3.3 *** A0A2U1MKY7_ARTAN) AT5G62150 Solyc03g026370.1 25 14 3 16 5 0 2 0 9 4 3 0 4 8 17 Peptidoglycan-binding LysM domain-containing protein (AHRD V3.3 *** A0A2U1MKY7_ARTAN) Solyc03g026373.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* O04163_NEPRA) Solyc03g026375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A2U1PE88_ARTAN) Solyc03g150105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 71A6 (AHRD V3.3 *-* A0A2G3CY69_CAPCH) Solyc03g026400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* A0A1U8G7I8_CAPAN) Solyc03g026410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* A0A1U8G7I8_CAPAN) Solyc03g026411.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Unknown protein Solyc03g026412.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g026414.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g026416.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g026418.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g031410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g031420.1 735 692 1537 785 1059 993 935 1039 720 742 1629 887 845 652 1492 molybdenum cofactor sulfurase (AHRD V3.3 *** A0A2I4FGR8_9ROSI) AT5G51920 Solyc03g031430.1 45 36 67 46 12 23 50 39 48 60 26 38 61 55 66 urease accessory protein F AT1G21840 Solyc03g031440.4 58 45 139 60 68 80 57 38 51 68 109 47 44 50 126 NAD(P)H dehydrogenase (Quinone) (AHRD V3.3 *** A0A2G2XZH4_CAPAN) Solyc03g031450.3 5 0 0 2 0 0 0 0 0 0 0 0 1 1 0 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1PMP2_ARTAN) Solyc03g031460.1 337 676 606 389 645 454 425 636 586 348 380 608 881 729 295 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QY39_9MAGN) AT1G55890 Solyc03g031470.3 6 7 5 14 0 0 0 0 0 1 1 0 0 4 4 Dihydroflavonol 4-reductase (AHRD V3.3 *** Q403G5_LOTJA) AT1G61720 Solyc03g031480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g031483.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Fruit-specific protein (AHRD V3.3 -** FSPM_SOLLC) Solyc03g031487.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) ATMG00240 Solyc03g031500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g031510.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Fruit-specific protein (AHRD V3.3 *** A0A2G3AW17_CAPCH) Solyc03g031520.4 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G2XEV3_CAPBA) Solyc03g031530.4 17 15 26 56 0 1 3 0 8 17 10 3 1 6 16 Sulfite exporter TauE/SafE family protein 2 (AHRD V3.3 *** TAUE2_ARATH) AT1G61740 Solyc03g031540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine-rich receptor-like protein kinase 10 (AHRD V3.3 *-* A0A1U8GGM1_CAPAN) Solyc03g031550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine-rich receptor-like protein kinase 25 (AHRD V3.3 *-* A0A2G2WWP2_CAPBA) Solyc03g031555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc03g031560.4 44 100 71 78 123 90 120 78 74 69 86 70 133 116 132 UDP-3-O-acylglucosamine N-acyltransferase (AHRD V3.3 *** A0A2S4MKT6_9BRAD) AT4G21220 Solyc03g031570.4 0 6 3 8 8 1 13 7 2 2 6 2 7 4 1 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *-* A0A2I0XH04_9ASPA) Solyc03g031580.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Stigma-specific Stig1 family protein (AHRD V3.3 *** A0A2U1PTF1_ARTAN) AT1G11925 Solyc03g031590.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-type anion channel SLAH1 (AHRD V3.3 *** A0A2G2YQT8_CAPAN) AT1G62280 Solyc03g031600.3 1079 1257 2097 1688 813 821 836 720 1896 1944 1637 1688 3669 2874 2028 Peroxisomal membrane protein PMP22 (AHRD V3.3 *** A0A2G3CKH8_CAPCH) Solyc03g031610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g031620.3 355 783 1793 1211 1217 1285 1285 1210 1814 1060 1365 1774 1927 1324 711 5'-adenylylsulfate reductase 1, chloroplastic (AHRD V3.3 *** S5ZQS8_NICAT) AT4G04610 Solyc03g031630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-binding EF-hand family protein-like (AHRD V3.3 *** Q6ZFI7_ORYSJ) Solyc03g031640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g031650.4 168 74 128 176 154 102 123 144 133 157 112 124 125 113 64 Autophagy-related protein (AHRD V3.3 *** A0A1U8GGM9_CAPAN) AT1G62040 Solyc03g031660.1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g031670.3 3063 2803 1626 1937 2017 1706 1747 2130 1903 2797 1835 2006 3138 2584 1705 calcium-dependent protein kinase AT4G04720 Solyc03g031680.3 280 341 320 312 252 284 352 320 344 382 300 369 291 357 374 hypothetical protein (AHRD V3.3 *** AT1G61900.1) AT1G61900 Solyc03g031690.3 1129 732 972 905 838 846 949 747 824 689 702 694 1041 746 980 DNA-directed RNA polymerases I, II, and III subunit rpabc3 (AHRD V3.3 *** A0A2G2WWR9_CAPBA) AT1G54250 Solyc03g031700.4 1795 1510 975 1272 1508 1285 1146 1428 1311 1670 1028 1291 1113 1028 1423 Fe-S cluster assembly protein SufB (AHRD V3.3 *** A0A1P8DZ57_9SPHI) AT4G04770 Solyc03g031710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook motif-containing protein (AHRD V3.3 *-* Q9FLX2_ARATH) AT5G52890 Solyc03g031720.3 4306 4688 3228 3246 3514 3352 3086 3700 3410 3181 2811 3192 4851 4136 3932 RNA-binding protein (AHRD V3.3 *** A0A2K3PBB6_TRIPR) AT1G11650 Solyc03g031730.3 109 212 302 244 236 154 250 107 544 685 479 290 809 459 579 Beta-glucosidase (AHRD V3.3 *** B6SYQ7_MAIZE) AT4G21760 Solyc03g031740.3 1 1 3 12 1 0 0 3 3 4 0 3 4 8 5 Glucose-6-phosphate/phosphate-translocator (AHRD V3.3 *** O64910_PEA) AT1G61800 Solyc03g031750.2 615 460 882 607 501 618 606 466 467 682 545 503 527 484 474 Vacuolar protein sorting-associated protein 28 homolog (AHRD V3.3 *** A0A2G3CKJ2_CAPCH) Solyc03g031760.4 902 1161 965 1260 790 1090 947 861 1294 681 762 1086 932 1234 530 Homeobox-leucine zipper protein HDG2-like (AHRD V3.3 *** A0A2K3P3R2_TRIPR) Solyc03g031770.3 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 CRIB domain-containing protein RIC10 (AHRD V3.3 *** A0A2G2ZLR9_CAPAN) AT4G04900 Solyc03g031780.4 86 278 199 302 495 482 479 435 296 104 251 330 30 177 161 nuclear polyadenylated RNA-binding protein 3-like isoform X1 (AHRD V3.3 --* XP_026421074.1) Solyc03g031790.1 2623 2898 2302 4822 3196 2511 2207 3343 2332 4965 2273 3579 3163 2887 1894 Oligosaccharyltransferase complex/magnesium transporter family protein (AHRD V3.3 *** AT1G61790.2) AT1G61790 Solyc03g031800.3 74 344 449 327 548 432 449 478 530 318 743 262 317 280 427 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G2WX11_CAPBA) AT1G11545 Solyc03g031810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein translation factor SUI1-like protein (AHRD V3.3 *** A0A1U8GSI8_CAPAN) AT4G27130 Solyc03g031820.4 325 339 361 410 367 392 413 372 417 355 281 449 322 372 247 Tyrosyl-DNA phosphodiesterase 1 (AHRD V3.3 *** A0A1J3DZX5_NOCCA) AT5G15170 Solyc03g031830.1 53 17 50 24 12 6 7 12 13 19 17 15 16 22 8 RING/U-box superfamily protein (AHRD V3.3 *** Q8GXD8_ARATH) AT4G03965 Solyc03g031840.3 1163 760 832 961 1050 1183 1089 1050 938 1049 1295 1080 747 765 1206 expansin precursor 3 AT3G03220 Solyc03g031850.1 76 82 105 116 96 114 95 74 85 84 89 96 46 72 72 PC-Esterase (AHRD V3.3 *** A0A200Q0Q5_9MAGN) AT3G03210 Solyc03g031860.3 1492 1203 360 710 872 883 816 824 744 885 374 557 621 400 712 Phytoene synthase 1,Pfam:PF00494 AT5G17230 Solyc03g031870.3 10 2 0 1 1 0 1 1 10 6 11 4 5 15 0 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200PYF6_9MAGN) AT1G66120 Solyc03g031880.3 33 33 30 39 25 26 21 30 22 12 18 32 23 31 36 Lysine-specific histone demethylase 1 (AHRD V3.3 *** B6SV76_MAIZE) AT1G65840 Solyc03g031890.3 826 158 279 75 6 22 12 9 48 308 288 67 48 157 310 Cold induced protein-like (AHRD V3.3 *-* Q94JH8_ORYSJ) Solyc03g031895.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Proteinase inhibitor type-2 CEVI57 (AHRD V3.3 *** A0A2G3CKE7_CAPCH) AT1G72060 Solyc03g031900.2 0 0 0 2 0 0 2 0 1 0 0 0 0 0 14 P-loop containing nucleoside triphosphate hydrolase (AHRD V3.3 *** A0A2U1N274_ARTAN) AT1G65810 Solyc03g031910.3 1509 798 1727 592 186 180 190 189 579 1010 830 326 2489 1291 1006 P-loop containing nucleoside triphosphate hydrolase (AHRD V3.3 *** A0A2U1N274_ARTAN) AT1G65810 Solyc03g031920.3 1956 913 913 749 220 157 222 144 698 1221 1314 355 2086 1145 811 Metal-nicotianamine transporter YSL (AHRD V3.3 *** A0A1S6YG52_PHAEQ) AT1G65730 Solyc03g031930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g031940.4 644 1495 1067 1678 896 959 770 1011 1660 1078 706 1451 1247 1948 1532 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200RCS7_9MAGN) AT1G21540 Solyc03g031950.3 3456 3636 2503 4998 4096 3349 2970 4211 3777 6230 2545 5239 3601 3203 1929 transmembrane protein (AHRD V3.3 *-* AT1G65720.1) AT1G65720 Solyc03g031955.1 63 79 138 74 94 81 107 68 57 54 49 78 54 81 94 Unknown protein Solyc03g031960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g031970.4 6366 8412 7870 9685 11763 12082 13951 11518 10440 9950 9437 9123 9004 9775 9334 Auxin response factor (AHRD V3.3 *** E0A8P3_SOLLC) AT5G37020 Solyc03g031980.4 733 381 625 531 127 152 72 71 324 553 487 331 474 442 886 Lectin-receptor kinase (AHRD V3.3 *** A0A2U1KV35_ARTAN) Solyc03g031990.4 15 13 23 31 26 9 12 8 10 13 11 14 49 28 26 Auxin efflux carrier (AHRD V3.3 *-* A0A2U1MR93_ARTAN) Solyc03g032000.4 319 756 763 555 852 730 822 851 709 517 631 768 775 763 478 Thioredoxin reductase (AHRD V3.3 *** A0A2G2WX24_CAPBA) AT2G17420 Solyc03g032020.4 413 295 237 264 159 163 175 275 306 340 204 258 328 313 266 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 (AHRD V3.3 *** HMDH3_SOLTU) Solyc03g032030.4 513 409 326 276 155 172 169 105 154 122 288 181 427 436 363 Phosphate carrier protein mitochondrial-like (AHRD V3.3 *** A0A2K3NVK0_TRIPR) AT2G17270 Solyc03g032040.3 627 812 666 763 832 815 823 868 750 652 738 778 564 776 574 Tonoplast monosaccharide transporter 1 Solyc03g032050.4 396 449 437 314 475 336 259 331 459 365 279 308 426 411 364 Ras-related protein Rab-11A (AHRD V3.3 *** A0A1J3E4X9_NOCCA) AT5G65960 Solyc03g032060.1 123 88 83 109 133 135 129 101 89 91 88 74 131 99 63 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN) Solyc03g032065.1 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc03g032070.3 2480 2574 2528 2366 2630 2905 2403 2377 1801 1897 2207 2563 2681 2563 2319 RuvB-like helicase (AHRD V3.3 *** A0A2G3CKP2_CAPCH) AT5G67630 Solyc03g032075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin efflux carrier (AHRD V3.3 *-* A0A2U1L545_ARTAN) Solyc03g032080.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin efflux carrier (AHRD V3.3 *** A0A200PYL2_9MAGN) Solyc03g032090.1 499 371 254 271 132 138 105 134 181 582 238 307 494 382 359 Amino acid transporter (AHRD V3.3 *** A0A200PYH9_9MAGN) AT4G38250 Solyc03g032100.2 192 154 165 147 149 159 152 141 183 124 129 151 177 149 185 PHD finger-like protein (AHRD V3.3 --* AT4G35510.1) AT4G35510 Solyc03g032110.3 0 1 0 0 0 1 0 3 0 2 1 3 0 0 0 RB1-inducible coiled-coil protein (AHRD V3.3 *** AT2G17550.1) AT2G17550 Solyc03g032120.3 342 367 486 505 453 504 555 429 391 434 561 462 308 355 333 Expressed protein (AHRD V3.3 *** AT5G66005.3) AT5G66005 Solyc03g032130.4 7245 6191 6452 6644 8027 8639 7524 7164 7168 6838 8351 8128 4426 6038 5808 High mobility group family (AHRD V3.3 *-* S8EDU2_9LAMI) Solyc03g032140.4 689 428 537 439 188 393 387 214 274 305 632 325 290 441 703 Heterogeneous nuclear ribonucleoprotein, putative, expressed (AHRD V3.3 *** Q2RAY1_ORYSJ) AT5G66010 Solyc03g032150.3 378 218 355 157 116 168 139 132 220 191 288 191 336 232 277 Protein kinase domain (AHRD V3.3 *-* A0A200PQX9_9MAGN) Solyc03g032160.3 2485 2509 2124 1794 2318 1900 1824 2574 2382 2814 1675 2357 2842 2219 2007 Ubiquitin domain-containing protein DSK2b (AHRD V3.3 *** A0A2G2ZM95_CAPAN) AT2G17200 Solyc03g032170.2 6 3 3 11 11 3 2 3 4 4 0 3 2 6 4 Unknown protein Solyc03g032180.3 571 393 393 429 375 373 378 335 402 301 408 394 386 434 533 Poly(A) polymerase I (AHRD V3.3 *** A0A1J3HIS1_NOCCA) AT2G17580 Solyc03g032190.3 117 889 1336 1524 2088 2418 2495 2313 959 802 982 1483 149 687 619 cyclinB2_7 Solyc03g032210.3 55 92 127 57 104 100 130 134 151 98 95 131 107 121 126 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNF3_9MAGN) AT2G17650 Solyc03g032215.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 12 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc03g032220.3 21 25 28 33 23 27 27 16 14 35 64 22 63 12 20 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G3CKP4_CAPCH) AT4G26220 Solyc03g032230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heat shock protein 90-1 (AHRD V3.3 *-* A0A2G2XG09_CAPBA) AT4G35690 Solyc03g032240.4 65 81 115 65 38 53 26 32 21 34 37 51 43 66 55 cation/H(+) antiporter 2-like (AHRD V3.3 *** A0A2I4FW97_9ROSI) AT1G79400 Solyc03g032243.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 IQ domain-containing protein (AHRD V3.3 *-* A0A1Q3B9N0_CEPFO) AT3G51380 Solyc03g032247.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0WC85_9ASPA) Solyc03g033280.1 6 1 3 5 8 4 9 6 5 6 8 1 1 2 4 Tracheary element differentiation-related 6 (AHRD V3.3 *** C1PGW0_ZINVI) AT1G43790 Solyc03g033290.1 3 1 3 13 4 0 3 0 3 5 6 0 0 1 8 Tracheary element differentiation-related 6 (AHRD V3.3 *** C1PGW0_ZINVI) AT5G48920 Solyc03g033295.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g033300.3 0 5 6 5 3 3 1 2 4 5 0 0 0 0 0 Ammonium transporter (AHRD V3.3 *** A0A2G3CKX5_CAPCH) Solyc03g033310.4 1443 977 975 737 916 1093 860 943 849 975 945 976 1008 992 992 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4JNU2_ARATH) Solyc03g033320.4 222 313 282 315 305 329 403 273 236 240 271 251 306 266 373 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4JZ25_ARATH) AT5G66060 Solyc03g033330.3 89 112 124 173 82 161 133 108 109 81 98 96 123 115 63 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1ML59_ARTAN) AT4G35840 Solyc03g033340.3 631 721 992 891 867 981 1060 826 849 639 943 682 894 948 791 Protein phosphatase 2C homolog (AHRD V3.3 *** Q9ZSQ7_MESCR) AT4G38520 Solyc03g033350.3 3 23 16 26 23 16 18 16 22 10 9 9 13 0 0 Aspartyl protease family protein 1 (AHRD V3.3 *-* A0A1J6IGL7_NICAT) Solyc03g033360.3 6 38 54 46 42 59 70 22 78 31 134 20 18 21 15 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1KXY4_ARTAN) Solyc03g033370.3 78 42 128 75 50 51 48 40 53 59 94 78 87 66 100 Protein preY, mitochondrial (AHRD V3.3 *** A0A1U8GGR6_CAPAN) AT4G35905 Solyc03g033380.3 721 544 664 549 616 548 555 647 656 727 539 587 536 564 470 SPla/RYanodine receptor (SPRY) domain-containing protein (AHRD V3.3 *** A0A2U1PMW4_ARTAN) AT1G35470 Solyc03g033390.3 918 1584 1755 1643 2450 2273 2358 1882 1149 1080 1638 1740 1049 1486 950 F-box protein (AHRD V3.3 *** A0A2G2WXK3_CAPBA) AT4G35930 Solyc03g033400.4 2128 1650 1786 1600 1355 1440 1588 1477 1524 1588 1661 1367 1571 1626 1736 Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** A0A2G3CKZ4_CAPCH) AT2G17790 Solyc03g033410.4 0 3 26 37 20 3 3 3 0 5 0 2 0 5 56 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QCU7_9MAGN) Solyc03g033420.4 1017 1793 2025 1953 2416 2616 2847 2794 1785 1245 2274 1816 1816 1598 1375 Rac-like GTP binding protein (AHRD V3.3 *** Q9S821_PHYPA) Solyc03g033430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26S proteasome non-ATPase regulatory subunit 4-like protein (AHRD V3.3 *** A0A2G3CKT6_CAPCH) Solyc03g033440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha (AHRD V3.3 *-* A0A2K3NKL2_TRIPR) Solyc03g033450.4 654 576 695 550 645 856 922 593 514 451 606 473 603 633 751 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (AHRD V3.3 *** A0A097PSI6_HOUCO) AT5G66180 Solyc03g033460.3 168 125 168 147 102 112 100 96 127 151 206 109 181 152 74 Oligopeptide transporter (AHRD V3.3 *** A0A200RD47_9MAGN) Solyc03g033470.3 425 374 352 464 351 395 471 365 344 261 492 368 380 468 501 Calmodulin-lysine N-methyltransferase (AHRD V3.3 *** A0A1J3EL91_NOCCA) AT4G35987 Solyc03g033480.4 494 288 407 335 348 392 345 315 296 425 383 278 442 446 384 SWR1 complex subunit 6 (AHRD V3.3 *** A0A1U8GQE2_CAPAN) AT5G37055 Solyc03g033490.3 5 1 0 4 12 0 3 1 2 3 15 0 5 4 10 Thaumatin-like protein (AHRD V3.3 *** E5RDD7_CUCME) AT4G36010 Solyc03g033500.4 148 333 792 452 133 147 109 128 204 123 116 133 269 185 132 Cold-shock protein (AHRD V3.3 *-* A0A200RAC1_9MAGN) AT2G17870 Solyc03g033510.3 26 25 69 67 136 71 65 117 29 10 25 45 15 24 13 Armadillo repeat only 2 (AHRD V3.3 *** Q9FKW5_ARATH) AT5G66200 Solyc03g033515.1 1 0 0 8 0 5 0 1 2 0 3 0 0 2 7 Unknown protein Solyc03g033520.2 288 312 301 398 310 380 312 346 304 309 214 368 184 291 198 RVT_1 domain-containing protein/Intron_maturas2 domain-containing protein (AHRD V3.3 *** A0A1Q3C197_CEPFO) Solyc03g033530.4 171 107 153 151 82 119 121 88 145 123 181 139 113 183 96 DNA-(apurinic or apyrimidinic site) lyase (AHRD V3.3 *** A0A2G2ZMB4_CAPAN) AT4G36050 Solyc03g033540.3 3901 2030 2911 1997 1262 1485 1315 1262 1855 3746 2449 1533 2537 1721 1933 calcium-dependent protein kinase2 AT2G17890 Solyc03g033550.3 0 10 8 4 2 2 12 3 4 4 6 9 0 7 17 WEB family protein (AHRD V3.3 *** A0A2I0VRX2_9ASPA) AT2G17940 Solyc03g033560.3 4829 2171 1815 1555 1113 1190 1246 1137 1395 1973 1957 1433 1222 1510 1887 Zinc finger (Ran-binding) family protein (AHRD V3.3 *** A0A2U1KRR8_ARTAN) AT2G17975 Solyc03g033570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2X374_CAPBA) Solyc03g033580.3 378 505 614 556 557 536 614 524 658 486 499 455 485 506 447 Polyamine-modulated factor 1-binding protein (AHRD V3.3 *** A0A1P8B2T5_ARATH) AT2G17990 Solyc03g033590.1 129 215 63 223 147 200 129 101 250 278 166 81 119 55 143 Auxin-responsive protein SAUR20 (AHRD V3.3 *** A0A2G3A486_CAPAN) Solyc03g033600.3 561 727 773 639 759 832 796 730 668 436 767 578 748 731 604 Small nuclear ribonucleoprotein Sm D3 (AHRD V3.3 *** A0A1U8FJ77_CAPAN) AT1G20580 Solyc03g033610.1 89 258 266 186 278 458 359 324 280 151 318 249 158 259 130 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A061DLN8_THECC) AT4G36180 Solyc03g033620.3 823 694 676 745 520 444 355 532 943 1003 606 706 784 841 680 Serine carboxypeptidase S28 family protein (AHRD V3.3 *** A0A2U1LKS7_ARTAN) AT4G36195 Solyc03g033630.3 2344 1786 2291 2171 1896 2465 2375 1777 1736 1816 2414 1611 1820 1984 2374 Zinc finger CCCH domain-containing protein 44 (AHRD V3.3 *** A0A2G3CKZ0_CAPCH) Solyc03g033640.3 202 178 178 252 219 246 253 231 315 212 229 209 262 232 164 Transmembrane/coiled-coil protein (DUF726) (AHRD V3.3 *** B3H797_ARATH) AT4G36210 Solyc03g033650.3 446 354 420 374 450 470 430 420 333 314 418 341 355 345 469 altered inheritance of mitochondria protein (AHRD V3.3 *** AT3G51100.1) AT3G51100 Solyc03g033660.4 102 269 449 375 610 604 523 518 302 249 306 612 138 338 153 GATA transcription factor (AHRD V3.3 *** K4BFN8_SOLLC) Solyc03g033680.1 6 12 17 7 6 11 14 7 19 6 23 3 8 3 0 Expression of terpenoids 2 (AHRD V3.3 *-* U5L363_SOLLC) Solyc03g033690.2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4BFP1_SOLLC) Solyc03g033700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *-* M1C261_SOLTU) Solyc03g033710.3 0 1 0 1 0 5 6 1 0 0 0 0 0 2 0 Peroxidase (AHRD V3.3 *** K4BFP3_SOLLC) AT5G66390 Solyc03g033720.4 166 317 229 231 330 338 343 294 281 196 155 270 297 352 164 HECT-like ubiquitin-conjugating enzyme (E2)-binding protein (AHRD V3.3 *** AT3G26750.1) AT3G26750 Solyc03g033740.4 128 84 142 113 37 74 65 46 70 81 95 97 62 48 93 proteasome subunit beta type-1 (AHRD V3.3 --* NP_001314110.1) Solyc03g033750.2 9 5 4 3 0 0 0 0 0 7 30 3 6 6 0 AAA-ATPase At3g50940-like (AHRD V3.3 *-* A0A2I4EX93_9ROSI) Solyc03g033755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3H2F4_NOCCA) Solyc03g033760.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7-deoxyloganetin glucosyltransferase (AHRD V3.3 *-* A0A2G3CNR6_CAPCH) Solyc03g033770.1 20 1 3 1 0 0 0 0 1 0 8 0 0 8 1 protein HYPER-SENSITIVITY-RELATED 4-like (AHRD V3.3 *-* A0A2I4HR42_9ROSI) Solyc03g033790.4 14 8 0 1 0 0 0 0 0 14 0 0 26 28 1 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NGS8_ARTAN) AT3G50930 Solyc03g033795.1 14 14 41 14 0 1 4 2 17 14 52 2 80 21 16 AAA-ATPase At3g50940-like (AHRD V3.3 *-* A0A2I4EX93_9ROSI) Solyc03g033820.1 0 0 7 2 7 12 7 2 1 1 3 7 0 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NGS8_ARTAN) AT3G50930 Solyc03g033830.2 0 0 0 2 4 8 1 0 1 1 9 11 0 0 2 Proline-rich receptor-like protein kinase PERK10 (AHRD V3.3 *-* A0A2G3CFL1_CAPCH) Solyc03g033840.4 1371 790 761 370 29 29 23 30 171 1585 754 112 4175 1250 617 AAA-ATPase At3g50940-like (AHRD V3.3 *** A0A2I4EX93_9ROSI) AT3G50930 Solyc03g033850.3 319 205 224 131 168 159 185 136 124 171 219 171 221 164 241 Syntaxin-81 (AHRD V3.3 *** A0A2G2WXF8_CAPBA) AT1G51740 Solyc03g033860.1 1 6 49 25 37 22 11 14 19 10 19 25 13 12 20 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit (AHRD V3.3 *** AT5G66440.1) AT5G66440 Solyc03g033880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2X374_CAPBA) Solyc03g033890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc03g033900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc03g033910.1 10 1 3 0 8 1 0 3 2 6 5 3 4 2 1 Unknown protein Solyc03g033920.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Unknown protein Solyc03g033930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 agamous-like MADS-box protein AGL29 (AHRD V3.3 *** XP_025886052.1) Solyc03g033940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc03g033950.4 5059 3532 2687 2453 2471 2537 2379 2218 2904 2355 2498 2278 3221 2994 3034 BUD13-like protein (AHRD V3.3 *** A0A1J3DNW1_NOCCA) AT1G31870 Solyc03g033970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Isoflavone reductase-like protein (AHRD V3.3 *** Q76LW3_NICSY) Solyc03g033980.4 2226 1548 1843 1770 1737 1850 1945 1744 1633 1962 2159 1523 1402 1515 1685 Tubby-like F-box protein (AHRD V3.3 *** A0A2G3D7T8_CAPCH) AT2G18280 Solyc03g033990.1 650 528 488 920 360 372 455 381 279 462 595 328 441 500 403 Cytochrome c-type biogenesis protein CcmE (AHRD V3.3 *** A0A1J3F0T2_NOCCA) AT3G51790 Solyc03g034000.3 52 30 85 36 21 15 14 7 24 76 27 18 30 50 94 bHLH transcription factor 020 AT4G36540 Solyc03g034010.3 101 267 353 255 401 406 409 318 316 132 349 251 237 343 240 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3CL67_CAPCH) Solyc03g034020.4 1882 1151 1428 1030 259 341 331 304 507 1186 1049 549 1588 1135 946 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CL67_CAPCH) AT4G36550 Solyc03g034030.3 57 6 10 18 6 30 25 27 13 18 20 30 5 18 35 Plant Late Embryo Abundant (LEA) related (AHRD V3.3 *-* F5GUH5_CAEEL) Solyc03g034050.3 599 408 395 445 315 292 344 292 447 534 472 437 399 344 371 MIP18 family protein (AHRD V3.3 *** A0A2G3CL79_CAPCH) Solyc03g034055.1 5 2 18 11 2 6 2 4 13 4 0 4 2 14 11 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc03g034057.1 9 4 2 4 0 6 1 1 8 1 0 3 0 2 1 Unknown protein Solyc03g034060.4 0 8 7 16 5 5 13 8 4 5 0 2 3 1 6 Proline-rich receptor-like protein kinase PERK5 (AHRD V3.3 *** A0A2G3CKX6_CAPCH) AT4G34440 Solyc03g034070.1 129 392 409 575 746 682 708 629 370 391 403 406 345 321 254 anti-muellerian hormone type-2 receptor (AHRD V3.3 *** AT3G50685.1) AT3G50685 Solyc03g034080.4 2455 2250 1847 1811 2024 2603 2213 2175 2453 1761 2058 2108 1564 2222 2080 Acidic leucine-rich nuclear phosphoprotein 32-related protein (AHRD V3.3 *-* A0A1U8GGI0_CAPAN) AT3G50690 Solyc03g034090.3 35 129 136 195 207 271 204 173 159 110 182 132 133 150 155 DUF1195 domain-containing protein (AHRD V3.3 *** A0A1Q3BNM7_CEPFO) Solyc03g034100.4 11 71 50 80 84 57 31 49 58 27 102 33 10 37 256 ovate family protein 6 AT2G18500 Solyc03g034110.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HOX14 (AHRD V3.3 *** A0A1U8GKM2_CAPAN) Solyc03g034120.3 67 31 22 69 0 2 1 2 24 26 17 6 14 26 21 Homeobox-leucine zipper protein HOX14 (AHRD V3.3 *** A0A1U8GKM2_CAPAN) Solyc03g034130.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HOX14 (AHRD V3.3 *** A0A1U8GKM2_CAPAN) Solyc03g034140.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H dehydrogenase (Quinone) (AHRD V3.3 *** A0A2G2XZH4_CAPAN) Solyc03g034150.2 26 14 0 0 0 0 0 0 0 0 0 0 36 23 0 Homeobox-leucine zipper protein HOX14 (AHRD V3.3 *** A0A1U8GKM2_CAPAN) Solyc03g034155.1 1 5 0 0 3 2 3 1 6 0 0 1 2 2 2 Unknown protein Solyc03g034160.4 18 16 15 18 24 23 24 11 25 19 9 17 20 44 32 Unknown protein Solyc03g034170.4 240 350 299 274 451 329 358 534 345 378 256 381 201 368 272 acclimation of photosynthesis to environment (AHRD V3.3 *** AT5G38660.1) AT5G38660 Solyc03g034180.3 396 570 420 368 416 385 421 439 526 401 473 384 661 489 568 14-3-3-like protein (AHRD V3.3 *** A0A1U8F4U6_CAPAN) AT5G38480 Solyc03g034190.3 91 206 227 233 279 243 269 206 231 210 179 202 201 238 121 30S ribosomal protein 3, chloroplastic (AHRD V3.3 *** A0A2G3CKY6_CAPCH) AT5G15760 Solyc03g034200.3 6395 5437 3731 4058 4595 4066 4497 4655 4311 5327 4042 4423 4583 4601 3710 KH domain-containing protein (AHRD V3.3 *** A0A2I0VQH4_9ASPA) Solyc03g034203.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 L-ascorbate peroxidase T, chloroplastic (AHRD V3.3 *-* A0A2G3B1R4_CAPCH) Solyc03g034205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g034207.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 K-box region protein (DUF1985) (AHRD V3.3 -** AT1G31150.2) Solyc03g034220.3 7293 10671 11191 9507 13387 11186 11909 13137 10652 11529 9761 10156 8345 6861 11078 Tomato RuBP carboxylase small subunit AT5G38430 Solyc03g034230.3 308 102 159 170 98 104 108 80 60 151 104 89 89 111 112 hypothetical protein (AHRD V3.3 *** AT3G02555.2) Solyc03g034240.4 10 0 2 18 0 0 0 0 2 0 0 0 0 1 0 Abscisic acid (Aba)-deficient 4 (AHRD V3.3 *-* A0A1P8AQ81_ARATH) Solyc03g034250.4 181 204 333 237 270 254 219 235 191 277 189 237 249 205 143 peptidase M50B-like protein (AHRD V3.3 *** AT1G67060.1),Pfam:PF13398 Solyc03g034260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc03g034270.3 272 210 196 238 194 215 230 192 188 157 228 203 221 275 209 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9FF34_ARATH) AT5G38220 Solyc03g034280.3 5 7 33 0 0 0 0 4 0 2 0 0 0 0 0 GPI-anchored protein LORELEI (AHRD V3.3 *** A0A2I0VKS3_9ASPA) Solyc03g034290.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3AXR7_CAPCH) Solyc03g034300.1 81 175 248 159 240 259 192 185 187 134 304 133 179 120 141 50S ribosomal protein-like protein (AHRD V3.3 *** Q9LF08_ARATH) AT1G66890 Solyc03g034320.3 4 8 1 11 12 14 10 20 8 1 7 12 16 13 4 Class I glutamine amidotransferase-like superfamily protein (AHRD V3.3 *** F4KA45_ARATH) AT5G38200 Solyc03g034330.1 0 0 0 1 0 0 0 0 15 4 26 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A1I9LP30_ARATH) Solyc03g034332.1 0 0 1 0 0 0 0 0 0 0 0 2 0 1 0 sentrin-specific protease 6-like (AHRD V3.3 --* XP_022878713.1) Solyc03g034334.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein (AHRD V3.3 *** A0A2P5BKA3_TREOI) Solyc03g034336.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A1I9LP30_ARATH) Solyc03g034338.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A1I9LP30_ARATH) Solyc03g034370.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc03g034380.1 2377 3905 4492 2069 2991 3027 2794 3113 4698 4900 3719 2163 2466 1650 1386 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** Q9FF39_ARATH) Solyc03g034390.1 3258 3239 3673 2766 3540 3433 3173 3372 4412 5905 4026 2366 3424 1486 1966 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *-* Q94AQ3_ARATH) Solyc03g034392.1 56 32 91 63 36 43 37 39 30 43 23 51 53 42 8 Unknown protein Solyc03g034394.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc03g034396.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3K151_TRIPR) Solyc03g034398.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3MBU8_TRIPR) Solyc03g034400.3 71 67 35 137 52 57 32 35 49 38 19 43 70 38 60 Protein DETOXIFICATION (AHRD V3.3 *** A0A2U1NLL3_ARTAN) AT1G66760 Solyc03g034410.1 2 3 17 7 0 1 3 2 1 6 26 3 0 0 15 DUF4228 domain-containing protein (AHRD V3.3 *** A0A1Q3D1C5_CEPFO) AT3G03280 Solyc03g150106.1 0 0 1 0 0 4 0 5 2 0 0 0 2 0 0 Unknown protein Solyc03g034415.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Protein-lysine N-methyltransferase (AHRD V3.3 *-* Q96347_BRANA) Solyc03g150107.1 318 364 196 136 230 179 235 315 262 288 192 259 211 223 139 Unknown protein Solyc03g034430.1 1253 1214 950 712 996 1121 1041 963 750 755 1027 773 1038 990 1102 Eukaryotic translation initiation factor 5 (AHRD V3.3 *** A0A2G2VCU5_CAPBA) AT1G77840 Solyc03g034440.2 1781 942 882 778 572 599 582 585 881 821 940 733 835 826 1025 Eukaryotic translation initiation factor 5 (AHRD V3.3 *** A0A2G2VCU5_CAPBA) AT1G77840 Solyc03g034450.4 274 296 262 291 346 346 279 250 364 294 318 320 367 278 263 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G2WYW6_CAPBA) AT5G37930 Solyc03g034455.1 100 57 50 33 18 35 32 7 25 51 36 33 33 36 83 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G2WYW6_CAPBA) AT5G37930 Solyc03g042560.3 41 58 70 16 12 0 1 0 12 25 47 5 19 16 13 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G2YQ27_CAPAN) Solyc03g042500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3DFU3_CEPFO) Solyc03g036477.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *** A0A2K3PAY3_TRIPR) AT5G18000 Solyc03g037490.1 1 1 0 0 0 0 0 0 4 0 4 0 3 0 0 E3 ubiquitin-protein ligase (AHRD V3.3 *-* A0A2G3CLG0_CAPCH) AT5G37930 Solyc03g043600.3 1491 997 1162 1047 1189 1254 1243 1079 1123 1190 1135 1157 812 1000 1186 Aminotransferase-like mobile domain-containing protein (AHRD V3.3 *** A0A2U1M006_ARTAN) Solyc03g043640.3 30 14 17 20 12 5 5 4 9 9 17 1 12 9 9 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6PA46_ACTCH) AT5G17450 Solyc03g043660.3 1939 1095 969 964 599 675 652 768 1006 1155 667 751 942 990 1005 Protease Do-like 7 (AHRD V3.3 *** A0A2G2ZMM2_CAPAN) AT3G03380 Solyc03g150108.1 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc03g043700.3 84 55 83 50 46 38 20 29 30 50 145 46 93 86 66 U-box domain-containing protein 4-like (AHRD V3.3 *** A0A2I4HV32_9ROSI) AT3G03440 Solyc03g043710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lectin receptor kinase (AHRD V3.3 *-* Q6UY57_MEDTR) AT5G10530 Solyc03g043720.4 127 117 133 122 137 133 137 119 102 110 91 90 137 105 103 Protein BRICK 1 (AHRD V3.3 *** A0A1J3D7P5_NOCCA) AT2G22640 Solyc03g043730.1 5 0 0 2 3 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc03g043735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VXM7_9ASPA) Solyc03g043740.4 239 41 124 491 6 18 12 9 105 48 116 70 293 219 336 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** A0A2U1M3E1_ARTAN) AT5G65660 Solyc03g043750.3 600 409 526 384 317 394 373 360 509 442 440 405 309 488 580 Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial (AHRD V3.3 *** A0A2G2VCR1_CAPBA) AT5G08740 Solyc03g043760.4 3479 2203 2426 2050 1645 1870 1790 1556 2335 2170 2617 1746 2364 2544 3089 Chromatin SPT2 (AHRD V3.3 *-* A0A2U1N6L0_ARTAN) AT2G22720 Solyc03g043770.4 589 1253 1815 1851 2520 2344 2494 2338 1439 1272 1715 2012 1368 1485 951 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *-* A0A061DPD7_THECC) Solyc03g043780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g043790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150109.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 basic leucine zipper 34-like (AHRD V3.3 --* XP_025886059.1) Solyc03g043850.3 22 15 7 68 2 9 2 7 9 8 9 1 16 21 44 cytochrome c oxidase subunit 6a, mitochondrial-like (AHRD V3.3 *** A0A2I4HW31_9ROSI) Solyc03g043860.2 139 57 100 163 0 0 0 0 24 38 26 2 45 122 251 nudix hydrolase 1 (AHRD V3.3 *** A0A2I4ED83_9ROSI) Solyc03g043870.3 308 340 518 469 430 405 422 367 347 393 547 392 316 400 437 zinc ion binding protein (AHRD V3.3 *** AT5G65740.2) AT5G65740 Solyc03g043880.3 1 12 6 6 34 21 19 23 20 9 10 14 34 8 4 SlBCAT4 AT3G49680 Solyc03g043890.3 4 4 10 1 0 6 0 1 4 8 0 11 0 0 1 1-aminocyclopropane-1-carboxylate synthase AT4G37770 Solyc03g043895.1 68 50 30 16 8 23 15 11 3 18 0 8 38 57 21 Basic-leucine zipper domain-containing protein (AHRD V3.3 *** A0A2U1MIY1_ARTAN) AT4G37730 Solyc03g043910.3 11 24 6 46 51 33 39 46 50 48 25 21 17 27 46 BSD domain-containing protein (AHRD V3.3 *** A0A1Q3AQ21_CEPFO) AT5G65910 Solyc03g043920.4 0 0 0 1 0 0 0 0 0 0 0 0 0 8 0 Galactosyl transferase GMA12/MNN10 family protein (AHRD V3.3 *** A0A2U1NY56_ARTAN) AT2G22900 Solyc03g043930.4 124 195 179 175 221 202 188 148 208 176 245 270 283 207 247 Heptahelical transmembrane protein 4 (AHRD V3.3 *** A0A1J3DWA9_NOCCA) Solyc03g043940.4 153 77 90 140 59 29 46 33 85 81 101 61 96 96 131 Unknown protein Solyc03g043950.4 639 468 549 582 647 747 748 629 930 917 774 963 479 438 605 Amino-acid acetyltransferase-like protein (AHRD V3.3 *** A0A2K3MR62_TRIPR) AT2G22910 Solyc03g043960.3 415 677 732 801 827 958 1056 871 754 679 880 728 685 692 667 ADP-ribosylation factor-like protein 8A (AHRD V3.3 *** A0A2I4EDC4_9ROSI) AT3G49870 Solyc03g043970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Arabinanase/levansucrase/invertase (AHRD V3.3 *-* AT5G67540.1) Solyc03g043990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyl hydrolase family protein 43 (AHRD V3.3 *-* A0A2U1PKN1_ARTAN) Solyc03g044000.1 3449 5685 4835 3988 4941 5107 4866 5112 3891 2966 4437 4165 6043 5262 4722 60S ribosomal protein L26 (AHRD V3.3 *** A0A1U8FHZ3_CAPAN) AT3G49910 Solyc03g044010.4 561 894 590 573 596 518 491 615 559 567 650 494 1049 861 434 Mitochondrial outer membrane protein porin 2 (AHRD V3.3 *** A0A1U8GMQ6_CAPAN) AT5G67500 Solyc03g044020.4 488 455 366 497 538 515 449 632 425 448 387 541 219 345 257 Condensin-2 complex subunit G2 (AHRD V3.3 *** A0A200QAQ6_9MAGN) AT1G64960 Solyc03g150110.1 6 1 1 1 0 1 0 0 2 3 7 0 1 2 0 Pre-mRNA-splicing factor SYF1 (AHRD V3.3 *-* A0A1U8G7X9_CAPAN) Solyc03g044024.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) Solyc03g150111.1 98 90 110 155 97 122 162 91 176 227 255 251 78 126 153 Unknown protein Solyc03g150112.1 16 15 42 21 11 20 10 14 13 44 18 38 25 31 30 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G3C774_CAPCH) Solyc03g044060.4 489 855 1268 1649 1018 1075 1205 971 1086 1131 1471 846 1025 1210 1055 Formin-like protein (AHRD V3.3 *** A0A2G3CLP8_CAPCH) AT5G67470 Solyc03g044080.4 435 409 374 356 303 342 301 281 354 341 336 248 504 378 417 hypothetical protein (AHRD V3.3 --* AT4G37608.2) Solyc03g150113.1 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic (AHRD V3.3 *-* A0A2G2ZW71_CAPAN) Solyc03g044090.4 301 264 293 290 144 142 126 116 246 178 278 157 156 278 347 BTB domain-containing protein/NPH3 domain-containing protein (AHRD V3.3 *** A0A1Q3ASI0_CEPFO) Solyc03g044100.4 305 226 251 257 142 213 183 204 141 204 311 152 144 192 137 Peroxidase (AHRD V3.3 *** K4BG30_SOLLC) Solyc03g043580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3DE23_CEPFO) AT5G18000 Solyc03g043585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g044120.1 20 22 0 34 0 0 0 6 26 29 29 18 46 24 98 Tyrosine/DOPA decarboxylase 3 (AHRD V3.3 *** A0A2G3CLG2_CAPCH) Solyc03g044140.3 1669 1935 1912 1879 1945 2024 1995 1951 1904 1422 1883 1732 2230 1915 1806 Protein kinase domain (AHRD V3.3 *** A0A200R2Z4_9MAGN) AT5G67380 Solyc03g044150.4 3511 4295 5942 4272 3885 4019 3936 4206 5565 4385 6202 3806 3095 3330 4031 Subtilisin-like protease (AHRD V3.3 *** A9XG40_TOBAC) AT5G67360 Solyc03g150114.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *-* AT5G67350.1) Solyc03g044160.3 453 346 368 313 176 213 206 201 342 566 345 254 384 280 190 Kinase family protein (AHRD V3.3 *** S8C376_9LAMI) Solyc03g044180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 -** AT4G37290.1) AT4G37290 Solyc03g044190.3 882 709 645 663 730 675 683 888 748 1121 914 843 576 689 938 FAD dependent oxidoreductase (AHRD V3.3 *** A0A200PV18_9MAGN) AT5G67290 Solyc03g044200.3 115 82 42 97 13 7 5 24 80 52 110 62 113 100 254 Alcohol dehydrogenase-like protein (AHRD V3.3 *** A0A291L9M0_MENPI) Solyc03g044205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3JUZ2_TRIPR) Solyc03g044210.4 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 vicilin-like seed storage protein isoform X1 (AHRD V3.3 *** A0A2I4GN49_9ROSI) AT2G28490 Solyc03g044220.1 274 295 332 323 202 250 264 314 272 360 305 367 160 253 190 F-box protein (AHRD V3.3 *** A0A2G2XGV7_CAPBA) Solyc03g044230.1 3 0 0 4 0 0 0 0 0 0 0 0 1 0 0 Cysteine proteinase RD21a (AHRD V3.3 *** A0A2G3D8B6_CAPCH) Solyc03g044233.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine protease (AHRD V3.3 *-* B1Q3A2_BRAOT) Solyc03g044235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cysteine proteinase COT44-like (AHRD V3.3 *-* A0A2I4E2U4_9ROSI) Solyc03g044237.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PN10_ARTAN) AT1G57730 Solyc03g044250.1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 Unknown protein Solyc03g044260.3 600 583 486 526 501 494 475 410 447 390 449 441 765 624 515 Ubiquitin-conjugating enzyme (AHRD V3.3 *** B3TLZ3_ELAGV) AT3G57870 Solyc03g044270.3 649 859 765 804 989 1062 933 873 714 757 651 707 794 827 716 tRNA-dihydrouridine synthase (AHRD V3.3 *** A0A2G3D8C2_CAPCH) AT5G67220 Solyc03g150115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B1Z6_ARATH) AT1G57730 Solyc03g150116.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PN10_ARTAN) AT1G57730 Solyc03g044280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine protease (AHRD V3.3 *-* B7X948_HORVU) Solyc03g044300.3 120 93 181 222 73 145 92 79 74 77 82 127 37 151 129 APETALA2a AT4G36920 Solyc03g044330.1 9552 8018 5530 9099 7224 6771 6830 7807 6518 10740 5823 7510 6169 5906 7601 Acetolactate synthase (AHRD V3.3 *** C0L093_TOBAC) AT3G48560 Solyc03g044340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g044350.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Transcription elongation factor (AHRD V3.3 *** A0A200Q6X7_9MAGN) Solyc03g044355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc03g044370.3 414 271 274 262 309 369 348 279 269 295 276 266 247 316 393 OTU domain-containing protein (AHRD V3.3 *** A0A1Q3CLG3_CEPFO) AT5G67170 Solyc03g044380.3 625 1102 1154 1387 1349 1901 1844 1580 1154 764 1253 1220 824 1111 1140 EZ2 AT2G23380 Solyc03g044410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 --* AT2G37150.9) Solyc03g044420.2 40 42 43 67 26 35 41 21 18 37 52 43 15 37 57 Unknown protein Solyc03g044430.3 201 185 148 191 134 158 136 134 151 146 148 135 218 191 311 Nicotinate phosphoribosyltransferase (AHRD V3.3 *** A0A1U8GGJ3_CAPAN) AT2G23420 Solyc03g044440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 13 (AHRD V3.3 *-* A0A2G2XAM6_CAPBA) Solyc03g044460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A1P8BGW7_ARATH) Solyc03g044470.4 498 637 520 710 715 711 760 831 759 830 801 750 614 568 482 red chlorophyll catabolite reductase AT4G37000 Solyc03g044480.3 128 97 61 61 32 29 27 32 78 45 87 24 145 53 54 Cyclin-dependent kinase inhibitor 1 (AHRD V3.3 --* KRP1_ARATH) Solyc03g044485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 --* AT3G62260.2) Solyc03g044510.3 267 267 415 340 440 468 472 420 277 213 363 273 226 254 268 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** F4JKP9_ARATH) AT3G50620 Solyc03g044520.2 12 18 4 17 17 20 9 18 9 13 18 12 27 12 11 Unknown protein Solyc03g044530.1 0 0 1 11 0 0 0 0 1 0 0 0 3 0 5 precursor of CEP9 (AHRD V3.3 -** XP_021825073.1) Solyc03g044540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oleosin 14.9 kDa (AHRD V3.3 *-* A0A2G3CHZ7_CAPCH) AT5G26805 Solyc03g044545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc03g044560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 precursor of CEP9-like (AHRD V3.3 -** XP_022853937.1) Solyc03g044580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 precursor of CEP5-like (AHRD V3.3 -** XP_021691795.1) AT2G23440 Solyc03g044590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein%2C putative (DUF1279) (AHRD V3.3 *** AT2G20940.2) AT2G20940 Solyc03g044600.2 0 7 5 16 6 3 7 6 12 2 3 18 2 1 1 Unknown protein Solyc03g044620.4 834 874 647 793 599 724 694 770 812 848 538 823 671 848 658 Transmembrane protein 131-like protein (AHRD V3.3 *-* A0A2K3P8P0_TRIPR) Solyc03g044625.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A8MR35_ARATH) Solyc03g044630.2 5 3 7 11 13 3 2 3 15 38 9 18 18 21 19 DUF309 domain protein (AHRD V3.3 *** AT2G41120.1) AT2G41120 Solyc03g044660.3 323 762 433 355 441 403 389 528 465 395 409 502 1123 747 554 4-hydroxy-tetrahydrodipicolinate synthase (AHRD V3.3 *** Q1PDD5_9ORYZ) AT2G45440 Solyc03g044662.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator ARR3 (AHRD V3.3 *-* A0A2G3B8A4_CAPCH) Solyc03g044664.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc03g044666.1 51 20 26 36 63 70 75 56 40 34 18 40 38 18 44 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *** A0A1J3K3X9_NOCCA) Solyc03g044668.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) ATMG00240 Solyc03g044690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2I0XAY7_9ASPA) Solyc03g044700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 --* A0A200QWX4_9MAGN) Solyc03g044710.4 77 166 109 345 255 288 328 169 174 94 225 153 39 118 150 Patatin (AHRD V3.3 *** A0A2G2XHJ4_CAPBA) Solyc03g044720.2 119 194 208 119 191 162 168 128 146 144 115 125 196 176 221 Isoflavone reductase-like protein (AHRD V3.3 *** A0A2I0XGC2_9ASPA) AT4G34540 Solyc03g044725.1 11 20 9 2 16 8 6 14 17 12 6 2 3 10 0 Unknown protein Solyc03g044740.4 84 104 41 127 105 83 80 90 125 182 202 115 133 107 189 Methyl esterase 1 (AHRD V3.3 *** A0A2U1LMY0_ARTAN) AT3G50440 Solyc03g044742.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A1U9X5Y9_THAGA) Solyc03g044744.1 562 300 459 413 232 339 302 254 236 320 396 241 364 334 507 Unknown protein Solyc03g044746.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HAT family dimerization domain-containing protein (AHRD V3.3 *-* A0A2K3L9L4_TRIPR) Solyc03g044748.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) ATMG00240 Solyc03g044790.3 495 162 70 191 10 6 0 2 52 113 84 35 185 254 265 methylesterase AY455313 Solyc03g044793.1 1 3 0 6 1 5 4 1 6 10 14 0 0 2 0 Unknown protein Solyc03g044797.1 1 0 0 1 3 1 6 1 2 0 0 7 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3IX28_NOCCA) Solyc03g044800.2 12 5 5 6 1 0 0 0 4 4 0 1 5 3 16 Methyl jasmonate esterase (AHRD V3.3 *** Q56SE1_SOLTU) Solyc03g044810.2 5 1 0 0 0 2 3 0 0 6 2 0 1 6 0 Methyl jasmonate esterase (AHRD V3.3 *** Q56SE1_SOLTU) Solyc03g044815.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L8G7_TRIPR) ATMG00240 Solyc03g044820.4 68 95 23 71 23 34 34 16 46 67 31 46 60 45 38 Methyl jasmonate esterase (AHRD V3.3 *** Q56SE1_SOLTU) Solyc03g044830.4 5 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1MAA7_ARTAN) AT3G50390 Solyc03g044833.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G3C774_CAPCH) Solyc03g044837.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc03g044850.1 7 0 3 0 0 0 1 0 3 1 1 6 3 1 0 protein SRC1 (AHRD V3.3 --* XP_011094145.1) Solyc03g044860.1 12 1 4 0 0 0 0 0 0 6 0 0 0 2 0 HTH-type transcriptional regulator (AHRD V3.3 *-* A0A2P5FXV7_TREOI) AT2G23690 Solyc03g044880.4 110 129 179 133 133 156 148 149 101 105 133 95 131 107 109 Exostosin-like protein (AHRD V3.3 *** A0A2U1PVZ1_ARTAN) AT1G67410 Solyc03g044890.1 0 0 5 0 0 0 0 0 1 1 0 0 1 0 0 myo-inositol monophosphatase 2 AT3G02870 Solyc03g044900.3 167 72 202 149 1 2 4 5 32 71 169 22 757 215 116 Calmodulin-like 41 (AHRD V3.3 *** A0A2U1NW79_ARTAN) AT3G50770 Solyc03g044910.1 3682 872 941 916 226 196 178 224 332 1024 592 486 783 584 516 Elongation of fatty acids protein 3-like (AHRD V3.3 *** A0A1U8GG41_CAPAN) AT4G36830 Solyc03g044915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc03g044930.3 0 0 0 0 5 3 8 3 0 6 3 1 0 0 0 Unknown protein Solyc03g044933.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein ALP1-like isoform X1 (AHRD V3.3 *-* XP_010322370.1) Solyc03g044937.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc03g044950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium uniporter protein 1, mitochondrial (AHRD V3.3 *** A0A2G3D389_CAPCH) Solyc03g044960.2 0 7 4 1 29 19 13 6 1 3 1 1 2 4 0 Calcium uniporter protein 2, mitochondrial (AHRD V3.3 *** A0A2G3ABZ2_CAPAN) Solyc03g044970.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g044980.1 19 19 18 8 0 14 6 2 8 18 0 12 7 16 1 Unknown protein Solyc03g044990.1 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 Unknown protein Solyc03g045000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF1909-domain-containing protein (AHRD V3.3 *** A0A1J7IYE1_9PEZI) AT2G23090 Solyc03g045010.1 0 0 3 0 4 0 3 0 0 0 0 1 0 0 0 Tyrosine/DOPA decarboxylase 2 (AHRD V3.3 *-* A0A2G2X7R1_CAPBA) Solyc03g045020.4 0 0 0 0 0 1 0 0 1 2 0 0 0 0 0 Tyrosine/dopa decarboxylase (AHRD V3.3 *-* Q9AXN7_THLFG) Solyc03g045030.2 17 36 81 61 46 36 14 25 24 81 30 68 7 28 27 TCP transcription factor 26 Solyc03g045040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transferase (AHRD V3.3 *-* A0A200QGG9_9MAGN) Solyc03g045050.4 1994 2439 2560 1821 2536 2748 2429 2866 2985 1777 2208 2316 2451 2653 2116 Nuclear matrix constituent-like protein 1 (AHRD V3.3 *** E5GCT1_CUCME) AT1G67230 Solyc03g045060.3 1640 1269 1526 1479 1500 1464 1473 1403 1332 1283 1305 1324 1528 1236 1314 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein (AHRD V3.3 *** Q93YW4_ARATH) AT5G38600 Solyc03g045070.1 12 38 31 53 55 69 85 56 43 60 44 38 31 11 62 ammonium transporter AF118858 Solyc03g045080.3 1 0 1 6 0 0 0 0 0 7 12 1 0 0 0 protein GAMETE EXPRESSED 3 isoform X1 (AHRD V3.3 *** A0A2I4E2H5_9ROSI) AT5G16020 Solyc03g045090.3 3922 3706 2998 2795 2614 2181 2079 2724 3250 4056 2692 3591 4010 3820 3029 dihydroflavonol 4-reductase/flavanone protein (AHRD V3.3 *** AT3G02420.1) AT3G02420 Solyc03g045100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g045110.3 101 27 34 36 10 19 27 12 29 44 26 27 45 55 63 Ribosomal protein S5 (AHRD V3.3 *-* A8J2I5_CHLRE) Solyc03g045120.1 22 36 7 11 16 21 13 22 28 19 34 25 26 21 1 Unknown protein Solyc03g045130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g045140.4 28 20 14 21 7 7 10 3 20 50 63 12 39 27 42 Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V3.3 *** A0A2U1PIS2_ARTAN) AT3G23530 Solyc03g045150.1 1 0 0 1 0 0 0 0 0 2 6 0 0 3 0 Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V3.3 *-* A0A2U1QM01_ARTAN),Pfam:PF13450 Solyc03g046200.1 67 112 264 200 222 265 226 133 142 192 173 95 55 83 195 Beta-glucan-binding protein 1 (AHRD V3.3 *** A0EJF0_MEDTR) AT5G15870 Solyc03g150117.1 666 369 525 842 287 305 344 261 371 608 598 451 399 508 518 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3HZ90_NOCCA) Solyc03g046250.1 81 66 50 111 137 96 103 69 53 63 101 87 48 64 107 Unknown protein Solyc03g046260.2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 golgin family A protein (AHRD V3.3 *** AT5G15880.1) AT5G15880 Solyc03g046270.4 16 15 22 61 8 13 12 15 20 29 50 26 11 33 39 Protein trichome birefringence-like 19 (AHRD V3.3 *** A0A1U8GSF3_CAPAN) AT5G15900 Solyc03g150118.1 18 18 11 14 42 15 17 12 15 30 13 24 15 54 10 Unknown protein Solyc03g046280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein DAYSLEEPER (AHRD V3.3 *-* A0A1J3JPE0_NOCCA) Solyc03g046290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein DAYSLEEPER-like (AHRD V3.3 *-* A0A2I4H6F8_9ROSI) Solyc03g046300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TRICHOME BIREFRINGENCE-LIKE 19 (AHRD V3.3 *-* A0A2U1LGD9_ARTAN) Solyc03g046310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 19 (AHRD V3.3 *-* A0A2G3A5M5_CAPAN) Solyc03g046320.4 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Late embryogenesis abundant protein (LEA) family protein (AHRD V3.3 *** A0A2U1MVV9_ARTAN) Solyc03g046340.3 364 516 545 575 616 635 556 617 690 344 444 488 623 619 337 ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A2G2ZNV8_CAPAN) AT3G02450 Solyc03g046350.3 1062 1149 1561 1010 986 1127 990 725 930 541 1656 798 1528 1318 1566 Ribosomal RNA-processing protein 7 (AHRD V3.3 *-* A0A200QPW1_9MAGN) AT5G38720 Solyc03g046360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 18 (AHRD V3.3 *** A0A2G3C2Z8_CAPCH) Solyc03g046380.1 80 33 54 40 6 4 9 5 4 30 38 2 3 17 47 Seed maturation protein PM41 (AHRD V3.3 *** A0A2K3K2J9_TRIPR) AT2G21820 Solyc03g046390.1 7 8 18 2 33 18 28 21 5 4 9 4 15 11 9 Unknown protein Solyc03g046410.3 80 73 61 42 54 64 64 72 49 67 54 107 53 44 53 Unknown protein Solyc03g046420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g046430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g046440.3 2 21 20 105 73 37 40 40 19 21 66 21 40 0 8 Basic leucine zipper 43 (AHRD V3.3 *** A0A1U8FPR4_CAPAN) AT3G30530 Solyc03g046450.3 1068 888 1104 1021 1143 1445 1557 1180 1200 1043 1229 996 738 1038 1526 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1PEI4_ARTAN) AT5G15680 Solyc03g046470.3 1092 1367 1964 1896 1797 1888 2112 2035 1552 1525 1860 1661 1709 1633 1880 O-fucosyltransferase family protein (AHRD V3.3 *** A0A2U1QP00_ARTAN) AT3G30300 Solyc03g046475.1 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc03g046490.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2U1PY13_ARTAN) Solyc03g046492.1 1 0 4 7 0 2 0 0 8 1 2 2 0 1 0 Cytochrome (AHRD V3.3 *-* A0A2G2ZFR1_CAPAN) AT5G35920 Solyc03g046494.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *-* A0A2G3CDZ2_CAPCH) Solyc03g046496.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *-* A0A1U8GTE9_CAPAN) Solyc03g046498.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G2X9U6_CAPBA) AT5G35920 Solyc03g046540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g046570.4 1020 672 789 877 502 602 688 543 600 638 764 513 897 850 1093 transcription factor BIM2-like isoform X1 (AHRD V3.3 *** A0A2I4GSS3_9ROSI) Solyc03g046580.1 2 2 21 41 13 6 7 5 7 21 67 9 3 6 1 Pollen Ole e 1 allergen/extensin (AHRD V3.3 *-* A0A200R2G7_9MAGN) Solyc03g046590.3 814 879 709 851 861 826 760 889 891 797 627 785 1019 990 851 AUGMIN subunit 5 (AHRD V3.3 *** AUG5_ARATH) AT5G38880 Solyc03g046591.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g046592.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g046593.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150119.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g046595.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 nudix hydrolase 1 (AHRD V3.3 *-* A0A2I4ED83_9ROSI) Solyc03g070380.3 59 54 86 60 15 41 26 24 38 68 37 67 61 93 111 Methyl esterase 1 (AHRD V3.3 *** A0A2U1LMY0_ARTAN) AT2G23620 Solyc03g070390.3 1 6 3 6 8 16 9 8 7 14 18 20 23 5 4 Alpha-1,4-glucan-protein synthase [udp-forming] 1 (AHRD V3.3 *** A0A1J6KRR6_NICAT) Solyc03g070400.3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 tRNA (guanine(26)-N(2))-dimethyltransferase (AHRD V3.3 *** A0A1U8FZX9_CAPAN) Solyc03g070410.3 0 0 2 0 0 2 0 1 3 1 2 13 0 0 0 tRNA (guanine(26)-N(2))-dimethyltransferase (AHRD V3.3 *-* A0A078GML4_BRANA) Solyc03g070420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g070430.1 31 26 24 39 85 53 59 58 30 39 16 55 19 32 12 Unknown protein Solyc03g070440.4 7 102 85 84 79 58 62 47 37 54 122 52 30 60 106 COBRA-like protein (AHRD V3.3 *** K4BHH3_SOLLC) AT5G15630 Solyc03g070450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 COBRA-like protein (AHRD V3.3 *** A0A1U8FZY4_CAPAN) Solyc03g070460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 COBRA-like protein (AHRD V3.3 *-* K4BC66_SOLLC) Solyc03g070465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: cadmium/zinc-transporting ATPase HMA3-like, partial (AHRD V3.3 *-* XP_020266730.1) Solyc03g070470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ARF guanine-nucleotide exchange factor GNL2 (AHRD V3.3 *** A0A1U8EYH6_CAPAN) AT5G19610 Solyc03g070480.1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 Methyl esterase 11 (AHRD V3.3 *-* A0A2U1LRP6_ARTAN) Solyc03g070485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g071480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 --* AT4G10840.2) Solyc03g071490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *-* A0A328DM47_9ASTE) Solyc03g071500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g071530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g071535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 two-component response regulator ARR22-like (AHRD V3.3 --* XP_022845828.1) Solyc03g071540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g071550.3 221 183 177 191 209 198 237 276 208 270 196 203 275 226 219 Zinc finger, RING-type (AHRD V3.3 *** A0A1R3IP44_COCAP) AT5G58610 Solyc03g071560.4 608 413 471 443 309 426 421 391 603 352 511 464 666 629 634 RNA-binding protein (AHRD V3.3 *-* A0A1Y1HYH4_KLENI) AT5G04280 Solyc03g071570.3 502 2533 3096 3986 6020 5576 6675 5696 2479 1948 2842 3398 1930 2238 1801 Pectate lyase (AHRD V3.3 *** A0A2G2X594_CAPBA) AT5G04310 Solyc03g071590.3 241 405 216 195 140 100 80 90 94 63 43 51 193 346 385 chloroplast malate dehydrogenase AT5G58330 Solyc03g071610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type protein 1 (AHRD V3.3 *-* A0A1J3FK19_NOCCA) Solyc03g071620.2 675 2905 3192 3033 4446 4094 4136 4434 2798 1860 2955 3958 1454 2382 1472 Histone H2B (AHRD V3.3 *-* A0A328DBY2_9ASTE) Solyc03g071623.1 1 2 0 0 9 0 0 5 1 1 0 3 0 2 11 protein SENSITIVITY TO RED LIGHT REDUCED 1-like (AHRD V3.3 *-* XP_025883930.1) Solyc03g071627.1 494 254 425 515 455 456 459 346 310 388 518 384 272 378 605 Protein trichome birefringence-like 11 (AHRD V3.3 *-* A0A1U8FF54_CAPAN) Solyc03g071660.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 enhancer of mRNA-decapping protein 4-like (AHRD V3.3 *** A0A2I4F8S0_9ROSI) Solyc03g071680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L030_ARTAN) Solyc03g071690.4 122 271 373 308 222 161 179 166 334 275 287 194 199 235 338 Non-symbiotic hemoglobin 2 (AHRD V3.3 *** HBL2_SOLLC) AT3G10520 Solyc03g071700.1 5 2 4 12 5 0 6 0 9 6 5 1 8 2 1 Unknown protein Solyc03g071710.1 463 309 399 339 193 149 116 135 348 422 692 268 494 346 723 cyclin-dependent protein kinase inhibitor SMR1-like (AHRD V3.3 *** A0A2I4GVZ7_9ROSI) AT5G02420 Solyc03g071720.4 172 166 231 297 174 275 236 229 222 225 195 307 262 267 135 Phytol kinase 1, chloroplastic (AHRD V3.3 *** A0A1U8G8P2_CAPAN) AT5G04490 Solyc03g071730.1 0 3 0 2 0 0 0 0 0 2 0 9 0 2 0 Leghemoglobin reductase (AHRD V3.3 *-* A0A2G2YB76_CAPAN) Solyc03g071735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g071750.3 231 231 247 327 233 276 246 181 217 188 196 223 203 316 355 3-phosphoinositide-dependent protein kinase 1 (AHRD V3.3 *** A0A2G3CUY0_CAPCH) AT3G10540 Solyc03g071760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2G2WUM4_CAPBA) Solyc03g071790.1 0 1 0 0 0 1 0 0 0 0 0 3 0 0 0 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *** A0A2G2X789_CAPBA) Solyc03g150133.1 0 0 0 0 0 1 0 0 0 0 0 3 0 0 0 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *-* A0A1U8FYZ2_CAPAN) Solyc03g071800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *-* A0A1U8FYZ2_CAPAN) Solyc03g071810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X11 (AHRD V3.3 *-* XP_019068467.1) Solyc03g071820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *-* A0A1U8FYZ2_CAPAN) Solyc03g071830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *-* A0A1U8FYZ2_CAPAN) Solyc03g071840.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Amino acid transporter (AHRD V3.3 *-* A0A200R577_9MAGN) Solyc03g071850.1 3 1 6 1 0 2 0 0 0 2 0 0 4 0 2 Glycosyltransferase (AHRD V3.3 *** A0A2I4G8J4_9ROSI) Solyc03g071855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g071870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phenylalanine ammonia-lyase (AHRD V3.3 *-* A0A2G2VZP0_CAPBA) Solyc03g051620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g051640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sister-chromatid cohesion protein 3 (AHRD V3.3 *-* A0A2G3B9G7_CAPCH) Solyc03g051650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g051660.3 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 sister-chromatid cohesion protein 3 (AHRD V3.3 --* XP_025886976.1) Solyc03g051663.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase (AHRD V3.3 *-* A0A2U1MN94_ARTAN) Solyc03g051665.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Unknown protein Solyc03g051667.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g051670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 sister-chromatid cohesion protein 3 (AHRD V3.3 --* XP_025886976.1) Solyc03g051690.1 2 0 0 0 2 0 0 1 3 0 0 0 6 0 1 Unknown protein Solyc03g051700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase TOR (AHRD V3.3 *-* A0A0K0XR78_TOBAC) Solyc03g051710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sister-chromatid cohesion protein 3 (AHRD V3.3 *-* A0A2G3B9G7_CAPCH) Solyc03g051720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase (AHRD V3.3 *-* A0A2U1MN94_ARTAN) Solyc03g051770.2 854 578 687 815 695 690 723 586 625 707 611 662 570 676 827 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1MS68_ARTAN) AT3G57790 Solyc03g051780.3 10 22 20 11 16 17 8 6 18 5 7 20 22 21 17 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0XAV3_9ASPA) AT3G13770 Solyc03g051790.3 195 404 419 377 359 346 335 271 571 434 584 360 367 311 499 Nucleolar GAR2-like protein (AHRD V3.3 *** A0A2K3P267_TRIPR) AT2G42320 Solyc03g051800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G2XCD8_CAPBA) Solyc03g051810.4 547 594 696 691 831 883 871 948 640 682 557 829 428 648 489 Homogentisate solanesyltransferase, chloroplastic (AHRD V3.3 *** A0A1U8G129_CAPAN) AT3G11945 Solyc03g051880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain containing protein 52-like (AHRD V3.3 *-* XP_004234876.2) Solyc03g051900.4 1684 1822 1537 1159 868 840 979 979 1250 998 1003 1049 1716 2051 1776 Ribosomal protein S1 (AHRD V3.3 *** A0A200Q7K1_9MAGN) AT3G11964 Solyc03g051920.4 800 417 667 702 549 571 616 473 603 774 672 677 552 594 637 DUF620 domain-containing protein (AHRD V3.3 *** A0A1Q3D1F8_CEPFO) AT5G06610 Solyc03g051923.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 --* A0A2G2Z378_CAPAN) Solyc03g051927.1 96 117 98 99 117 135 113 128 126 135 61 107 141 98 107 SET domain protein 38 (AHRD V3.3 *-* A0A1P8BD47_ARATH) AT5G06620 Solyc03g051950.4 100 80 135 90 137 131 128 72 94 77 89 100 129 106 127 Histone-lysine N-methyltransferase ATXR4-like protein (AHRD V3.3 *** A0A2K3P286_TRIPR) Solyc03g051960.4 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A2G2X5E7_CAPBA) AT3G11980 Solyc03g051970.3 896 663 866 591 704 631 546 716 637 989 647 753 596 585 539 Lipid phosphate phosphatase delta (AHRD V3.3 *** A0A1U8GB88_CAPAN) AT3G58490 Solyc03g052970.1 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc03g052980.3 2197 2482 2419 2350 2579 2402 2258 2452 2619 2351 2032 2115 3229 2882 2257 RNA helicase DEAD11 AT2G42520 Solyc03g052990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cation efflux protein (AHRD V3.3 *** A0A200PY73_9MAGN) Solyc03g053000.4 73 129 71 112 103 107 123 147 149 108 75 112 92 152 99 C18orf8 (AHRD V3.3 *-* AT3G12010.1) Solyc03g053010.4 655 865 813 964 891 1108 1080 955 925 902 926 831 866 977 1097 C18orf8 (AHRD V3.3 *** AT3G12010.1) AT3G12010 Solyc03g053020.4 117 220 153 226 174 227 245 280 196 158 164 270 193 206 118 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** AT2G41950.1) AT2G41950 Solyc03g053040.1 55 66 107 81 59 121 120 89 75 40 76 37 58 75 189 Unknown protein Solyc03g053050.1 9 0 0 0 0 2 0 0 0 1 1 0 0 0 0 Unknown protein Solyc03g053060.3 2 4 11 0 1 0 3 4 0 0 0 0 1 0 0 Unknown protein Solyc03g053070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-LRR resistance protein (AHRD V3.3 *-* A0A2K3MPX4_TRIPR) Solyc03g053080.3 918 846 443 495 778 570 598 944 849 869 444 742 564 691 578 Kinesin (AHRD V3.3 *** A0A200RDE4_9MAGN) Solyc03g053085.1 1118 518 695 672 481 591 620 534 572 782 568 617 476 489 593 Ribonuclease 3-like protein 2 (AHRD V3.3 *-* A0A2G3BC36_CAPCH) Solyc03g053110.3 403 765 804 876 1137 1243 1294 1033 903 577 1115 765 722 795 1090 Rhodanese-like domain-containing protein 9, chloroplastic (AHRD V3.3 *** A0A1U8G2H7_CAPAN) AT2G42220 Solyc03g053120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TBCC domain-containing protein (AHRD V3.3 *-* A0A1Q3B7B9_CEPFO) Solyc03g053130.3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Strictosidine synthase (AHRD V3.3 *** A0A2I0WKV6_9ASPA) AT3G59530 Solyc03g053135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058190.3 902 996 808 774 583 581 593 783 1092 770 614 677 939 966 1133 GTP-binding protein TypA (AHRD V3.3 *** Q6SYB1_TRIPR) AT5G13650 Solyc03g058200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L14, chloroplastic (AHRD V3.3 *** I6N992_DATST) Solyc03g150124.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf68 protein (chloroplast) (AHRD V3.3 -** YP_009159802.1) Solyc03g150125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L22, chloroplastic (AHRD V3.3 *-* A0A2G2WX64_CAPBA) Solyc03g150126.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta, chloroplastic (AHRD V3.3 *-* A0A2U1KL25_ARTAN) Solyc03g058230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc03g058240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 protein (AHRD V3.3 *** J7H9P3_CAPAN) Solyc03g058250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2WI29_CAPBA) Solyc03g058260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf68 protein (chloroplast) (AHRD V3.3 *** YP_009159802.1) Solyc03g058300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-binding mitochondrial carrier protein SCaMC-1-like (AHRD V3.3 *-* A0A2K3PR43_TRIPR) Solyc03g058305.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3D998_CAPCH) Solyc03g058320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3D998_CAPCH) Solyc03g058330.3 12 6 0 6 0 3 2 3 3 8 0 5 3 3 6 18 kDa seed maturation protein-like (AHRD V3.3 *** XP_004234770.1) Solyc03g058340.3 166 189 288 230 242 290 275 152 165 131 281 188 235 261 304 GRIP/coiled-coil protein (AHRD V3.3 *** AT3G14430.1) AT3G14430 Solyc03g058343.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *** A0A2U1PDY8_ARTAN) Solyc03g058347.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *-* A0A2U1QNY9_ARTAN) Solyc03g058350.4 2959 3176 4200 3285 3020 3737 3464 2964 3574 2284 4470 2992 3630 4227 5003 Eukaryotic translation initiation factor 5B (AHRD V3.3 *** A0A2G2WJG0_CAPBA) Solyc03g058370.2 0 1 22 22 13 12 5 19 0 3 0 0 21 1 4 Glycosyltransferase (AHRD V3.3 *** A0A2I4GJH4_9ROSI) Solyc03g058390.2 1142 1146 2203 1191 1239 1481 1263 1115 1663 555 2559 1087 1546 1769 2959 Eukaryotic translation initiation factor 5B (AHRD V3.3 *-* A0A2G2X5R4_CAPBA) Solyc03g058400.4 1 0 11 0 7 2 6 5 1 0 0 2 0 4 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1PUH6_ARTAN) Solyc03g058420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058430.3 351 1058 784 941 1021 833 875 1218 734 817 498 911 846 851 533 Fatty acid desaturase (AHRD V3.3 *** E7CCC0_9BRAS) Solyc03g058433.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc03g058437.1 53 22 33 32 6 14 14 7 60 36 54 72 32 36 28 DUF3754 family protein%2C putative (DUF3754) (AHRD V3.3 *-* AT2G46915.2) Solyc03g058440.1 4 11 56 18 31 27 22 13 5 22 40 14 12 9 2 transmembrane protein (AHRD V3.3 *-* AT2G41200.1) Solyc03g058450.4 0 3 24 0 0 0 1 2 0 5 0 0 1 0 0 Glucan endo-1,3-beta-glucosidase 8 (AHRD V3.3 *** A0A2G2X542_CAPBA) Solyc03g058460.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Nudix hydrolase 16, mitochondrial (AHRD V3.3 *** A0A1U8GB73_CAPAN) Solyc03g058470.3 206 209 233 245 226 198 212 210 212 163 209 184 191 186 204 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1MNI3_ARTAN) AT2G43490 Solyc03g058490.1 0 2 9 1 0 1 1 1 0 0 0 0 0 0 0 Unknown protein Solyc03g058500.1 5 4 2 12 2 1 2 7 6 3 0 1 3 6 10 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *-* B6EUB2_ARATH) Solyc03g058550.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g058850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome 71D7 (AHRD V3.3 *** A0A2G3AZ01_CAPCH) Solyc03g058855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome 71D7 (AHRD V3.3 *-* A0A2G2Z383_CAPAN) Solyc03g150128.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome 71D7 (AHRD V3.3 *-* A0A2G2ZAR5_CAPAN) Solyc03g058860.3 525 556 713 551 753 590 607 640 772 649 623 598 487 534 477 3-dehydroquinate synthase (AHRD V3.3 *** A0A200QS88_9MAGN) AT3G28760 Solyc03g058880.4 1168 1085 721 826 973 891 926 922 844 765 708 884 1126 1176 701 Translation factor GUF1 homolog, mitochondrial (AHRD V3.3 *** A0A2G3CMF5_CAPCH) AT5G39900 Solyc03g058890.4 0 5 6 3 0 0 4 6 4 1 0 0 0 2 0 Pectate lyase (AHRD V3.3 *** A0A1U8FK05_CAPAN) AT1G14420 Solyc03g058900.3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Potassium channel KAT1 (AHRD V3.3 *-* A0A2G3ANB5_CAPAN) Solyc03g058910.3 12 64 51 75 22 46 31 65 45 7 53 39 14 47 41 Pectate lyase (AHRD V3.3 *** A0A2G2WYE5_CAPBA) Solyc03g058915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc03g058920.3 1102 4564 3574 3422 4988 4591 4952 4420 2986 2169 2291 3297 5703 5031 3468 Mitochondrial outer membrane protein porin (AHRD V3.3 *** A0A2K3KY08_TRIPR) AT3G01280 Solyc03g058930.4 255 125 188 185 74 106 122 46 82 127 273 82 87 150 224 Hypersensitive-induced response protein (AHRD V3.3 *-* A6YGE4_CARPA) Solyc03g058940.4 298 126 144 149 74 88 73 83 149 202 114 123 118 165 64 Hypersensitive-induced response protein (AHRD V3.3 *-* A0A2K3MY45_TRIPR) Solyc03g058950.3 474 495 442 594 441 499 570 421 447 335 503 439 659 556 641 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase (AHRD V3.3 *** A0A1U8GLV2_CAPAN) Solyc03g058960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase (AHRD V3.3 *-* A0A328DS98_9ASTE) Solyc03g058970.4 2001 1695 1800 1808 1617 1525 1559 1820 2453 2995 2316 2233 2045 1944 2495 Raffinose synthase family protein (AHRD V3.3 *** A0A2U1L8D0_ARTAN) Solyc03g059010.4 636 819 653 582 716 705 780 783 576 552 538 642 923 770 493 carbon catabolite repressor protein 4 homolog 1-like (AHRD V3.3 *** A0A2I4GY99_9ROSI) AT3G58560 Solyc03g059020.3 0 3 0 1 5 1 0 5 0 0 1 1 0 0 0 Protein STRUBBELIG-RECEPTOR FAMILY 2 (AHRD V3.3 *** A0A2G3CU71_CAPCH) AT5G06820 Solyc03g059030.4 732 700 684 567 497 470 520 535 755 603 539 644 703 682 670 CDK5RAP3-like protein (AHRD V3.3 *** A0A2G2Y5I9_CAPAN) AT5G06830 Solyc03g059040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g059070.4 192 272 354 282 334 323 294 243 336 253 309 243 323 302 330 Receptor-like protein kinase HERK 1 (AHRD V3.3 *** A0A2G3D0V6_CAPCH) Solyc03g059080.3 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A1I9LM53_ARATH) AT2G41970 Solyc03g059100.3 1512 1305 1258 1016 807 899 875 807 953 989 954 1084 1111 1061 1020 WD40 repeat (AHRD V3.3 *** A0A200Q432_9MAGN) AT2G43770 Solyc03g059110.1 150 52 66 50 36 40 56 50 43 111 77 73 26 38 23 Unknown protein Solyc03g059120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g059123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3INL5_COCAP) Solyc03g150129.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 purine permease 1-like (AHRD V3.3 *-* A0A1S4AAJ7_TOBAC) Solyc03g059140.4 203 171 114 165 99 135 138 127 123 146 55 123 83 138 62 Ion channel CASTOR (AHRD V3.3 *-* A0A2G3D0V3_CAPCH) Solyc03g059160.3 945 522 561 683 513 546 615 439 484 431 696 563 384 555 554 Ion channel CASTOR (AHRD V3.3 *** A0A2G2XVV6_CAPAN) Solyc03g059170.2 505 601 716 570 866 934 922 576 583 467 759 477 450 503 689 Rhodanese/cell cycle control phosphatase superfamily protein (AHRD V3.3 *-* A0A2K3P0J2_TRIPR) Solyc03g059180.4 314 478 266 408 457 486 524 660 539 419 242 513 329 352 357 Calcium sensing receptor, chloroplastic (AHRD V3.3 *** A0A1J3CV46_NOCCA) AT3G59780 Solyc03g059190.4 13 33 74 138 134 113 135 118 36 19 17 95 23 50 22 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1LFH9_ARTAN) Solyc03g059200.2 0 2 21 2 10 6 4 5 11 4 3 12 0 2 1 Myb-related protein (AHRD V3.3 *** A0A2G2WYH6_CAPBA) AT3G28470 Solyc03g059203.1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Unknown protein Solyc03g059205.1 2 0 0 7 8 0 0 3 1 1 0 0 4 3 0 Unknown protein Solyc03g059207.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc03g059250.3 880 853 826 778 901 781 730 885 1022 805 755 777 1218 1011 1032 Serine/threonine-protein kinase Nek6 (AHRD V3.3 *** A0A2G2ZY51_CAPAN) Solyc03g059260.4 845 474 158 283 198 267 252 204 300 397 94 283 304 134 144 Carboxyl-terminal-processing protease (AHRD V3.3 *** B6T6L2_MAIZE) AT3G57680 Solyc03g059270.4 26 117 99 111 207 116 192 102 86 54 68 85 172 112 197 Zinc finger protein (AHRD V3.3 *** A0A200QA40_9MAGN) Solyc03g059290.1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* A0A0V0IUN0_SOLCH) Solyc03g059300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein (AHRD V3.3 *-* A0A2U1NSV2_ARTAN) Solyc03g059310.3 1103 973 999 1215 1259 1245 1260 1305 1338 1134 894 1200 1165 1101 885 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1N2N2_ARTAN) AT3G18140 Solyc03g059315.1 7 8 6 13 5 6 10 1 7 3 0 10 5 10 8 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc03g059350.3 68 104 95 117 72 99 97 65 59 44 134 75 94 126 100 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G2YP10_CAPAN) Solyc03g059360.1 61 73 57 73 77 83 82 61 74 51 61 71 57 82 43 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G2YP10_CAPAN) Solyc03g059370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g059390.3 73 71 109 98 77 61 49 50 49 74 52 69 78 66 89 Tetraspanin-2 (AHRD V3.3 *** A0A2G3CFQ3_CAPCH) AT2G19580 Solyc03g059393.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g059395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin thioesterase (AHRD V3.3 *-* A0A2G2YKF4_CAPAN) Solyc03g059397.1 0 2 0 6 5 6 4 2 2 0 0 10 0 2 0 Unknown protein Solyc03g059400.1 18 4 17 3 8 13 3 13 14 20 8 7 6 10 7 Sister chromatid cohesion protein (AHRD V3.3 *-* A0A2G2ZNX8_CAPAN) Solyc03g059420.4 1787 1284 1081 1233 1123 1032 1222 1160 1378 1261 997 1054 1024 1497 1272 Sister chromatid cohesion protein (AHRD V3.3 *** A0A2G2ZNX8_CAPAN) AT5G15540 Solyc03g059425.1 1 1 7 5 2 0 1 2 1 2 20 2 9 1 0 Peroxisome biogenesis protein 2 (AHRD V3.3 *-* A0A2G2X6N8_CAPBA) Solyc03g059470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Suppressor SRP40-like protein (AHRD V3.3 *** F4IT95_ARATH) AT3G02125 Solyc03g059490.1 854 998 1135 912 930 982 1054 965 871 1084 953 918 813 760 680 Leucine rich repeat receptor protein kinase 2 (AHRD V3.3 *** F8WS89_SOLLC) AT3G02130 Solyc03g059500.3 8 15 23 26 21 23 26 26 8 8 9 12 6 10 26 Unknown protein Solyc03g060510.4 132 132 186 230 111 132 113 137 170 257 200 175 235 227 132 Keratin-associated protein, putative (DUF819) (AHRD V3.3 *** Q9LTG3_ARATH) Solyc03g060520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: uncharacterized protein LOC11424846 (AHRD V3.3 *-* XP_024639477.1) Solyc03g061560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 9 (AHRD V3.3 *** A0A0C5BKN3_9SOLA) Solyc03g061580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *-* A0A2G2YYW3_CAPAN) Solyc03g061590.4 149 162 67 106 126 137 112 204 158 229 100 124 120 132 60 cell division cycle protein 27 homolog B-like (AHRD V3.3 *-* A0A1S4BWC4_TOBAC) Solyc03g061600.4 1346 1010 864 917 1122 1099 1047 1296 953 1014 756 1035 906 961 837 Cell division cycle protein 27-like protein B (AHRD V3.3 *** A0A2G3CX99_CAPCH) AT2G20000 Solyc03g061610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3JID9_9ROSI) Solyc03g061620.1 2 0 2 4 0 5 2 1 0 4 0 2 0 0 7 Zinc finger homeodomain protein 1 (AHRD V3.3 *** B6SKR5_MAIZE) AT3G28917 Solyc03g061630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) Solyc03g061640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4 (AHRD V3.3 *-* A0A1J3D544_NOCCA) Solyc03g061650.3 7 3 9 1 6 7 16 1 4 11 6 5 4 4 0 F-box family protein (AHRD V3.3 *-* S8CP16_9LAMI) Solyc03g061653.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g061657.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g062650.3 647 925 941 877 904 887 895 986 896 702 594 838 884 960 726 thyroid adenoma-associated protein homolog (AHRD V3.3 *** A0A2I4H3K5_9ROSI) AT3G55160 Solyc03g062660.4 322 363 425 602 531 623 637 518 346 355 424 420 268 468 389 Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** A0A2U1NYP5_ARTAN) AT5G06940 Solyc03g062665.1 843 398 497 446 325 349 417 274 351 445 487 394 370 397 471 Unknown protein Solyc03g062670.1 2 0 0 0 0 0 0 0 0 0 1 0 1 0 0 NAC domain-containing protein (AHRD V3.3 *-* A0A2U1NSV2_ARTAN) Solyc03g062680.3 510 684 710 591 633 699 731 684 636 468 684 672 739 729 606 Serine/threonine-protein phosphatase 4 regulatory subunit-like protein (AHRD V3.3 *-* Q8VY58_ARATH) AT5G17070 Solyc03g062700.4 114 546 476 647 977 924 939 994 577 334 442 753 159 398 246 ARM repeat superfamily protein (AHRD V3.3 *-* AT3G03970.6) AT1G54385 Solyc03g062710.4 81 235 348 321 291 331 448 314 363 206 642 315 142 258 492 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 (AHRD V3.3 *** A0A2I4GSV2_9ROSI) AT1G55370 Solyc03g062720.3 35 68 65 75 104 111 113 128 75 38 139 88 26 53 41 Photosynthetic NDH subcomplex B 2 (AHRD V3.3 *** A0A0F7GZL7_9ROSI) AT1G64770 Solyc03g062725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g062740.4 10 16 9 20 16 20 14 20 18 16 18 14 12 25 49 Unknown protein Solyc03g062750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain (AHRD V3.3 *** A0A200PWA9_9MAGN) Solyc03g062780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S7, chloroplastic (AHRD V3.3 --* RR7_ATRBE) Solyc03g062790.3 483 699 835 653 957 923 1008 839 625 561 598 698 617 601 603 Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** A8MRU9_ARATH) AT2G42130 Solyc03g062800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* A0A1U8G7I8_CAPAN) Solyc03g062810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* A0A1U8G7I8_CAPAN) Solyc03g062820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor, MADS-box (AHRD V3.3 *-* A0A2U1Q521_ARTAN) Solyc03g062830.3 596 680 574 522 725 638 773 617 727 609 780 673 635 640 519 Nudix hydrolase (AHRD V3.3 *** A0A2U1N6R0_ARTAN) AT2G42070 Solyc03g062835.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc03g062890.3 791 812 1274 1119 1165 1164 1122 1028 1174 797 1235 1000 1155 1081 1441 Superoxide dismutase [Cu-Zn] (AHRD V3.3 *** A0A218WMH7_PUNGR) AT5G18100 Solyc03g062895.1 0 0 1 0 0 2 0 0 1 0 0 1 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) Solyc03g062900.3 1273 1161 772 553 465 604 522 472 452 504 432 529 1243 1069 956 elongation factor (AHRD V3.3 *** AT3G59670.1) AT3G59670 Solyc03g062920.1 1 2 0 3 0 0 1 1 2 1 1 4 0 5 0 Unknown protein Solyc03g062930.3 196 206 165 166 146 177 155 193 132 146 122 127 103 131 134 5'-3' exonuclease family protein (AHRD V3.3 *-* AT3G52050.2) Solyc03g062940.3 1533 855 768 794 809 708 697 815 987 1113 853 975 774 691 795 peroxisomal targeting signal type 2 receptor AT1G29260 Solyc03g062950.1 52 32 17 20 7 15 15 7 28 14 17 17 22 23 31 RuBisCO large subunit-binding protein subunit beta, chloroplastic (AHRD V3.3 *-* A0A2G3AJ36_CAPAN) Solyc03g062960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063010.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063030.4 37 131 25 114 90 139 98 96 75 54 77 85 92 82 42 Amino acid transporter (AHRD V3.3 *** A0A200R5Q3_9MAGN) Solyc03g063040.4 13 41 76 61 53 76 62 40 26 25 41 45 66 55 56 Amino acid transporter (AHRD V3.3 *-* S8DQ51_9LAMI) Solyc03g063050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Amino acid transporter (AHRD V3.3 *** A0A200R5Q3_9MAGN) Solyc03g063060.3 256 272 207 277 278 304 263 183 244 276 374 227 261 249 298 Ycf20-like protein (AHRD V3.3 *** A0A2G2VR95_CAPBA) AT1G65420 Solyc03g063070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063090.1 131 31 30 32 51 43 44 61 39 70 30 100 14 57 20 Unknown protein Solyc03g063100.2 3 9 8 11 4 0 4 5 1 1 13 4 2 10 8 single flower truss AT1G65480 Solyc03g063110.3 718 915 760 834 840 784 743 888 783 939 857 836 1031 983 999 Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *** A0A1U8G8K8_CAPAN) Solyc03g063140.4 25 16 60 40 40 42 8 10 19 23 28 54 9 43 11 LOB domain-containing protein (AHRD V3.3 *-* A0A2U1Q2L9_ARTAN) Solyc03g063150.3 0 0 0 0 3 0 0 2 2 0 0 0 0 0 0 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A2G2VEA3_CAPBA) AT1G55570 Solyc03g063160.1 32 69 73 65 55 49 44 62 48 44 31 61 57 71 39 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R8Q7_9MAGN) Solyc03g063180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A2G2WIF4_CAPBA) Solyc03g063200.3 1537 1890 2446 2460 2754 2689 2563 1931 1349 1429 2417 1937 1871 2068 2721 Zinc finger transcription factor 25 AT5G06770 Solyc03g063210.3 616 416 413 430 307 331 343 238 287 285 340 294 323 368 319 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (AHRD V3.3 *-* A0A2G2X643_CAPBA) Solyc03g063220.2 468 369 283 276 315 250 263 314 393 332 261 322 192 350 182 RNA helicase DEAH-box8 AT3G12810 Solyc03g063240.3 1066 693 785 940 852 687 682 776 858 1020 851 855 773 856 893 Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein (AHRD V3.3 *** A0A089NZG9_9RHIZ) AT3G03890 Solyc03g063250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063260.4 6 9 10 33 13 18 5 14 10 18 1 16 15 15 16 Unknown protein Solyc03g063280.3 1261 1351 1370 1167 1268 1291 1254 1308 1424 1109 1218 1421 1582 1480 1269 Protein EMSY-LIKE 3 (AHRD V3.3 *** A0A1U8G2K2_CAPAN) Solyc03g063290.3 134 216 222 240 205 207 218 223 241 169 240 210 234 234 217 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MQ30_ARTAN) Solyc03g063300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063320.3 476 536 524 670 548 496 535 468 437 402 415 411 606 502 493 Metal tolerance protein C2 (AHRD V3.3 *** A0A2G2X5Q6_CAPBA) AT3G12100 Solyc03g063340.3 1843 1861 1346 1726 1998 1788 1796 2199 1836 1907 1329 2329 1411 1405 993 DNA polymerase delta small subunit (AHRD V3.3 *** A0A1U8GTH7_CAPAN) AT2G42120 Solyc03g063350.3 499 723 748 682 743 802 830 755 585 480 678 578 890 913 675 DnaJ-like protein subfamily B member 8 (AHRD V3.3 *-* A0A2G2X5A9_CAPBA) AT2G42080 Solyc03g063353.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063357.1 1660 1431 1545 1454 1403 1308 1274 1217 1305 1208 1463 1156 1534 1520 1516 Unknown protein Solyc03g063370.3 114 56 143 129 77 119 96 56 73 50 91 66 59 58 62 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A1U8FY15_CAPAN) Solyc03g063380.3 8 0 10 7 5 3 14 3 1 3 0 6 1 3 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3D998_CAPCH) Solyc03g063390.1 114 71 74 50 82 75 103 76 90 57 64 104 112 70 81 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** A0A178V165_ARATH) Solyc03g063420.2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Proteasome subunit beta (AHRD V3.3 *** A0A2G3CJ01_CAPCH) Solyc03g063440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein DAYSLEEPER (AHRD V3.3 --* A0A1J3I687_NOCCA) Solyc03g063450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Proteasome subunit beta (AHRD V3.3 *-* A0A2G3CJ01_CAPCH) Solyc03g063460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 1 (AHRD V3.3 *-* A0A2G2YEE4_CAPAN) Solyc03g063470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc03g063490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063500.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 2 (AHRD V3.3 *-* A0A2P2CLE9_ARATH) Solyc03g063505.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: uncharacterized protein LOC112326444, partial (AHRD V3.3 *-* XP_024449890.1) Solyc03g063510.1 0 0 0 1 0 1 0 0 0 0 2 0 0 1 0 NADH-ubiquinone oxidoreductase chain 2 (AHRD V3.3 --* NU2M_ARATH) Solyc03g063520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* XP_023917131.1) Solyc03g063550.1 54 189 185 256 332 327 296 208 100 149 283 181 166 154 179 Cotton fiber protein (AHRD V3.3 *** Q84RF6_ARATH) AT3G57950 Solyc03g063560.3 2586 2832 1888 2144 2855 2830 2860 3199 3026 2586 1867 2328 1690 1967 2337 Glutamate synthase (AHRD V3.3 *** W7TEE5_9STRA) AT5G04140 Solyc03g150131.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc03g150132.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063600.4 942 1187 2134 1371 922 1230 988 979 1231 956 1859 732 1351 1333 1213 Guanylate kinase 1 (AHRD V3.3 *** A0A2G2X5F7_CAPBA) AT3G57550 Solyc03g063603.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063607.1 93 59 68 61 73 56 50 54 66 99 107 98 58 114 7 Unknown protein Solyc03g063640.1 9 6 0 1 2 5 0 2 7 10 10 10 13 5 1 Unknown protein Solyc03g063650.1 359 592 896 917 1000 1181 996 984 686 783 801 890 660 731 588 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2K3PKC0_TRIPR) AT2G41890 Solyc03g063653.1 5 19 25 8 13 8 19 16 7 12 14 20 12 16 9 Unknown protein Solyc03g063657.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc03g063680.3 569 634 975 853 829 689 739 722 575 879 611 845 494 838 504 Zinc finger transcription factor 26 Solyc03g063690.1 104 124 119 105 135 125 125 143 105 144 90 151 187 169 156 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R2Z2_9MAGN) AT5G52630 Solyc03g063700.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ARM repeat superfamily protein (AHRD V3.3 *-* A0A2U1NI83_ARTAN) Solyc03g063710.1 5 1 3 6 11 13 12 4 1 3 3 9 0 3 0 Unknown protein Solyc03g063720.4 22 132 194 186 299 359 317 311 141 112 202 226 66 125 83 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* A0A1P8AMX8_ARATH) AT1G14770 Solyc03g063730.4 200 137 187 158 2 10 13 4 81 122 82 49 116 136 213 Protein DETOXIFICATION (AHRD V3.3 *** A0A191UP89_GLYSO) AT1G33110 Solyc03g063750.3 420 507 598 652 606 581 602 517 646 508 654 481 729 667 706 Exostosin family protein (AHRD V3.3 *** A0A2U1LUA7_ARTAN) AT3G57630 Solyc03g063760.4 855 732 657 774 711 673 749 697 760 619 663 641 689 799 685 DNA-binding protein SMUBP-2 (AHRD V3.3 *** A0A2I4GEM5_9ROSI) AT2G03270 Solyc03g063770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC) Solyc03g063780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A2G3D2T0_CAPCH) Solyc03g063850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Uracil phosphoribosyltransferase (AHRD V3.3 *** A0A2G2YRA8_CAPAN) Solyc03g063880.3 1574 1433 1123 1136 1262 1231 1122 1505 1408 1438 1099 1438 1590 1315 997 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (AHRD V3.3 *** A0A2G2X4X6_CAPBA) AT3G57650 Solyc03g063900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g063970.3 144 147 235 163 253 290 275 230 139 130 163 236 198 186 151 Cornichon (AHRD V3.3 *** A0A200QBJ2_9MAGN) AT3G12180 Solyc03g064010.4 178 546 735 889 1098 1205 1156 1363 692 595 558 1356 283 723 317 Receptor protein kinase-like protein (AHRD V3.3 *** A0A2R6S230_ACTCH) AT3G57830 Solyc03g064020.3 3 0 15 18 1 9 4 0 10 2 26 6 2 11 9 Ras GTPase (AHRD V3.3 *** K2QMU3_MACPH) AT3G12160 Solyc03g064030.3 285 297 294 338 365 298 348 309 313 387 297 267 391 371 349 Alpha/beta hydrolase family protein (AHRD V3.3 *** Q8RWA3_ARATH) AT3G12150 Solyc03g065060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g065110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g065150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g065190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C (PP2C)-like domain (AHRD V3.3 *-* A0A200Q711_9MAGN) Solyc03g065200.4 4 10 37 29 11 7 5 7 8 13 11 7 0 0 13 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A1J3E5X3_NOCCA) AT3G29180 Solyc03g065230.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 beta-galactosidase 15-like, partial (AHRD V3.3 --* XP_021846138.1) Solyc03g065233.1 0 0 2 5 0 0 0 0 0 0 0 0 0 0 15 Unknown protein Solyc03g065235.1 41 27 110 73 46 56 70 45 39 25 64 24 23 35 56 Unknown protein Solyc03g065237.1 421 272 370 434 395 384 389 333 232 362 314 360 208 272 293 Unknown protein Solyc03g065250.4 2773 2581 3699 2650 906 1034 798 937 3115 3092 3809 2783 3126 3379 4801 Fatty acid hydroxylase superfamily (AHRD V3.3 *** A0A2U1L8N4_ARTAN) AT1G02205 Solyc03g065255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3M2C0_TRIPR) Solyc03g065300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposon, En/Spm-like, Transposase-associated domain protein (AHRD V3.3 --* A0A2U1N4P4_ARTAN) Solyc03g065310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g065330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g065340.3 1475 2139 1733 1705 2411 1871 1685 3027 2816 2598 1597 2407 2113 2040 2123 Alpha-1,4 glucan phosphorylase (AHRD V3.3 *** A0A2G3CMG9_CAPCH) AT3G29320 Solyc03g065350.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UDP-glucose 6-dehydrogenase (AHRD V3.3 *** Q6IVK6_TOBAC) Solyc03g065353.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-glucosidase-like SFR2, chloroplastic (AHRD V3.3 *-* A0A2G3AIS2_CAPAN) Solyc03g065355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g065357.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g104810.3 1665 1541 1364 1676 1569 1609 1434 1834 1611 1740 1278 1759 1590 1692 1744 WRKY transcription factor 5 Solyc03g104790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *-* A0A1P8AP48_ARATH) Solyc03g013630.4 106 196 191 293 197 219 257 174 181 105 186 155 165 202 199 Hexosyltransferase (AHRD V3.3 *** A0A1U8GF28_CAPAN) AT5G15470 Solyc03g013620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* I6N9A4_DATST) Solyc03g013610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L32, chloroplastic (AHRD V3.3 *** RK32_SOLTU) ATCG01020 Solyc03g013615.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (AHRD V3.3 *** I6N9B1_DATST) ATCG01090 Solyc03g013600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic (AHRD V3.3 *** A0A1U8QDA9_CAPAN) ATCG01080 Solyc03g013510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *-* A0A2G2ZHC0_CAPAN) Solyc03g013490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2H4YLE4_9ASTE) Solyc03g013480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc03g013470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA polymerase (AHRD V3.3 *-* A0A2I0VCD2_9ASPA) Solyc03g013460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 3 (AHRD V3.3 *-* A0A290WL11_SOLLC) Solyc03g013450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TGACG-sequence-specific DNA-binding protein TGA-1B (AHRD V3.3 *-* A0A2G3BIB7_CAPCH) Solyc03g013440.4 20 10 17 11 4 0 4 1 0 3 4 2 4 12 57 Amino acid transporter (AHRD V3.3 *-* A0A200QES2_9MAGN) Solyc03g013430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013420.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *-* A0A142BZ21_ZIZJJ) Solyc03g013370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FC (AHRD V3.3 *-* A0A0C5APX0_HYONI) Solyc03g013375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc03g013340.3 0 2 1 1 4 0 0 0 1 0 10 0 0 1 5 NOD26-like intrinsic protein 2.1 Solyc03g013330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013310.3 0 0 6 0 0 0 1 0 0 0 0 0 0 0 0 Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase (AHRD V3.3 *** A0A2I0V7Q5_9ASPA) AT5G39400 Solyc03g013300.1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1M803_ARTAN) Solyc03g013305.1 11 19 10 16 7 8 10 12 6 9 14 11 8 7 19 Transposon-like protein (AHRD V3.3 *-* A2I5F1_BETVU) Solyc03g013290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013293.1 0 0 0 0 0 0 2 0 3 1 2 1 0 0 6 Unknown protein Solyc03g013304.2 96 42 71 64 51 65 70 39 79 50 49 63 35 45 61 replication protein A 70 kDa DNA-binding subunit B-like isoform X1 (AHRD V3.3 *-* XP_020269520.1) Solyc03g013295.1 18 9 0 7 10 4 4 2 9 8 5 14 3 12 4 Unknown protein Solyc03g013297.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013250.4 366 352 456 415 274 364 373 334 243 282 292 264 378 382 459 hypothetical protein (AHRD V3.3 *** AT3G29280.1) AT3G29280 Solyc03g013240.4 274 287 59 189 350 324 268 252 233 326 154 189 151 88 144 lysine-tRNA ligase (AHRD V3.3 *** AT3G01060.1) AT3G01060 Solyc03g013230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* O79414_SOLTU) Solyc03g013180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 J domain-containing protein spf31 (AHRD V3.3 *-* XP_004251225.1) Solyc03g013160.4 40 78 77 29 81 60 52 61 59 131 112 65 44 42 66 Amino acid transporter (AHRD V3.3 *** A0A200QES2_9MAGN) AT5G15240 Solyc03g013150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1NKY3_ARTAN) Solyc03g013130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HAT family dimerization domain-containing protein (AHRD V3.3 *-* A0A2K3L9L4_TRIPR) Solyc03g013110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant basic secretory protein (BSP) family protein (AHRD V3.3 *** I3SK49_MEDTR) Solyc03g013100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1NKY3_ARTAN) Solyc03g013090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Basic secretory protease (AHRD V3.3 *-* A0A2G2WTQ8_CAPBA) Solyc03g013080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Basic secretory family protein (AHRD V3.3 *-* A0A2K3LW23_TRIPR) Solyc03g013070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g013060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant basic secretory protein (BSP) family protein (AHRD V3.3 *-* A0A061E078_THECC) Solyc03g013050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: probable protein phosphatase 2C 14 (AHRD V3.3 --* XP_024465353.1) Solyc03g013040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant basic secretory protein (BSP) family protein (AHRD V3.3 *** I3SK49_MEDTR) Solyc03g013030.3 446 633 401 470 535 545 505 590 456 343 325 474 660 562 539 Small ubiquitin-related modifier (AHRD V3.3 *** A0A1J3HM51_NOCCA) AT1G68185 Solyc03g013020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g077880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF4371 domain-containing protein (AHRD V3.3 *** A0A1Q3BET0_CEPFO) Solyc03g077890.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g077900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g077905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-norcoclaurine synthase (AHRD V3.3 *-* A0A2U1L0N5_ARTAN) Solyc03g077910.4 454 625 525 747 879 795 747 742 560 510 562 716 521 667 620 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) AT5G15050 Solyc03g077920.1 260 289 419 570 262 241 245 231 296 299 365 180 349 375 543 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061EXN6_THECC) AT5G06850 Solyc03g077930.3 13 10 19 23 5 3 1 0 3 8 4 9 9 10 14 40S ribosomal protein S9 (AHRD V3.3 *-* A0A2G3CFV4_CAPCH) Solyc03g077950.3 336 439 427 497 472 553 508 431 253 322 430 397 407 441 512 O-fucosyltransferase (AHRD V3.3 *** A0A2P5FK44_TREOI) Solyc03g077980.2 63 127 38 107 152 73 61 108 57 114 36 98 94 96 48 O-fucosyltransferase (AHRD V3.3 *-* A0A2P5FK44_TREOI) Solyc03g077985.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc03g077990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g078000.3 1484 1089 1036 1199 1048 1025 1141 972 1168 1305 1009 1136 915 1042 1326 Vacuolar glucose transporter 1 AT5G59250 Solyc03g078010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc03g078020.4 499 432 289 332 308 302 344 306 377 338 325 289 494 461 405 Peptide chain release factor 1 (AHRD V3.3 *** A0A1J3H9D8_NOCCA) AT2G47020 Solyc03g078030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g078050.2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 DUF1677 domain-containing protein (AHRD V3.3 *** A0A1Q3B0U5_CEPFO) Solyc03g078060.4 161 101 156 147 116 138 128 81 102 66 96 92 118 122 218 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* F4HPE1_ARATH) Solyc03g078070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HAT dimerisation domain-containing protein-like (AHRD V3.3 *-* C8TFH5_ORYSI) Solyc03g078080.4 912 809 861 921 834 842 898 830 713 840 843 844 686 761 1051 Uridylate kinase (AHRD V3.3 *** A0A1U8G0D1_CAPAN) AT3G18680 Solyc03g078090.4 4 10 32 12 0 6 3 4 7 10 22 13 15 2 1 Pectinesterase (AHRD V3.3 *** A0A2I4GT13_9ROSI) Solyc03g078100.3 211 319 252 420 477 381 321 451 421 379 231 330 410 300 183 Pectinesterase (AHRD V3.3 *** A0A200PXC9_9MAGN) AT5G09760 Solyc03g078105.1 6 0 0 1 3 0 4 1 1 1 0 0 3 0 1 Unknown protein Solyc03g078110.1 13 13 12 12 16 7 14 7 8 11 17 8 4 6 24 NAC domain-containing protein 16 (AHRD V3.3 --* A0A1U8EWF0_CAPAN) Solyc03g078120.4 418 248 282 126 193 203 184 169 195 351 275 201 178 197 185 NAC domain (AHRD V3.3 *-* A0A200QQQ7_9MAGN) Solyc03g078130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *-* Q9C564_ARATH) Solyc03g078140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3AMK9_CAPAN) Solyc03g078150.3 18 23 78 123 32 28 38 34 57 33 57 49 24 97 593 Amino acid transporter family protein (AHRD V3.3 *** S8E0T7_9LAMI) AT2G41190 Solyc03g078160.3 401 353 294 443 330 355 315 316 200 455 276 331 398 319 234 transmembrane protein%2C putative (Protein of unknown function%2C DUF538) (AHRD V3.3 *** AT3G07470.1) AT3G07470 Solyc03g078170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H (AHRD V3.3 *-* A0A2K3PB08_TRIPR) AT4G03566 Solyc03g078190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Low affinity sulfate transporter 3 (AHRD V3.3 *-* A0A2G2VM08_CAPBA) Solyc03g078200.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Subtilisin-like protease-like protein (AHRD V3.3 *** A0A2K3P789_TRIPR) AT1G62340 Solyc03g078210.4 85 90 95 90 85 55 94 54 74 117 110 47 65 59 161 Unknown protein Solyc03g078230.3 367 360 292 394 215 259 213 247 277 326 345 298 306 319 379 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QK73_ARTAN) AT1G47570 Solyc03g078240.3 258 32 16 16 3 10 6 4 16 30 18 43 15 85 267 Glycosyltransferase (AHRD V3.3 *** A0A1Q3CU17_CEPFO) Solyc03g078260.3 0 10 5 1 0 0 1 9 0 0 0 0 1 1 0 Pectin acetylesterase (AHRD V3.3 *** K4BHQ5_SOLLC) Solyc03g078270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phenylalanine ammonia-lyase (AHRD V3.3 *-* A0A2G2YQA4_CAPAN) Solyc03g078280.3 1 1 4 1 1 1 1 0 1 2 3 1 1 1 1 Phenylalanine ammonia-lyase (AHRD V3.3 *-* A0A2G3BJ81_CAPCH) Solyc03g078290.3 1053 2252 1702 1318 1650 1636 1586 1793 1055 926 1194 1434 2428 1803 1508 40S ribosomal protein S18 (AHRD V3.3 *** A0A2G3CUV3_CAPCH) AT1G34030 Solyc03g078300.3 1031 492 523 441 284 333 318 342 485 697 416 378 486 554 471 NBS-LRR resistance protein (AHRD V3.3 *** A0A2K3NU03_TRIPR) AT3G14470 Solyc03g078310.1 10 0 0 4 0 3 11 0 1 9 19 4 9 4 5 Long-Chain Acyl-CoA Synthetase (AHRD V3.3 *-* A0A1Y1I5E8_KLENI) Solyc03g078320.1 1 2 0 0 1 1 3 0 1 1 1 0 0 0 2 Long chain acyl-CoA synthetase 2 (AHRD V3.3 *-* A0A2G3ADD4_CAPAN) Solyc03g078325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc03g078330.1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G2VZG2_CAPBA) Solyc03g078350.3 316 316 321 317 290 362 397 386 277 379 449 314 439 387 372 UPF0235 protein C15orf40 homolog (AHRD V3.3 *** A0A2I4E3C4_9ROSI) AT1G49170 Solyc03g078355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc03g078360.1 337 144 76 63 4 1 4 6 23 75 73 12 206 159 121 Receptor-like protein kinase (AHRD V3.3 *** A0A2U1PPA0_ARTAN) Solyc03g078370.1 341 149 112 48 0 0 0 5 26 105 92 32 184 213 103 Receptor-like protein kinase (AHRD V3.3 *** A0A2U1PPA0_ARTAN) Solyc03g078380.1 619 617 403 547 453 394 354 418 486 720 495 408 542 395 570 Glutaredoxin family protein (AHRD V3.3 *** E5GCJ8_CUCME) AT5G13810 Solyc03g078385.1 3 0 0 3 1 3 0 1 2 0 3 3 0 0 12 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MRP1_TRIPR) Solyc03g078390.3 1490 1089 854 819 757 956 818 923 951 962 931 867 1078 1111 853 Ubiquitin carboxyl-terminal hydrolase 26 (AHRD V3.3 *** A0A1U8G1W1_CAPAN) AT3G49600 Solyc03g078400.3 14176 15672 12987 13853 14510 14892 15723 14929 12468 12630 11755 12704 13589 12720 15010 actin AT5G09810 Solyc03g150134.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 --* A0A2U1QNZ5_ARTAN) Solyc03g078420.4 0 4 11 0 0 2 0 3 1 0 2 1 0 1 0 Unknown protein Solyc03g078425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *-* C1IC54_GOSHI) Solyc03g078440.3 5 19 25 32 25 31 21 43 7 18 18 31 8 15 4 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *** C1IC54_GOSHI) AT4G39330 Solyc03g078470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor protein kinase, putative,expressed (AHRD V3.3 *-* D8L9G5_WHEAT) Solyc03g078480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 calmodulin-binding receptor-like cytoplasmic kinase 2 (AHRD V3.3 *-* A0A2I4DJK9_9ROSI) Solyc03g078490.4 198 191 151 149 70 90 89 90 156 127 154 126 305 194 364 Glycosyltransferase (AHRD V3.3 *** A0A2I4HTK4_9ROSI) Solyc03g078500.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2U1L2Y4_ARTAN) Solyc03g078505.1 68 25 79 63 100 63 63 93 0 67 0 0 247 0 18 Unknown protein Solyc03g078520.4 1188 1077 1488 1115 1113 1125 1170 1059 1340 971 1086 1097 1529 1433 1572 LRR receptor-like kinase (AHRD V3.3 *** A0A072TVB6_MEDTR) AT5G10290 Solyc03g078530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2G2VJL6_CAPBA) Solyc03g078533.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g150135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g078537.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc03g078560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *-* A0A200Q000_9MAGN) Solyc03g078570.3 57 96 160 87 177 134 216 169 85 99 159 108 73 104 58 Rab family GTPase (AHRD V3.3 *** A0A1Y1IFP9_KLENI) AT5G10260 Solyc03g078580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g078590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Argonaute family member (AHRD V3.3 *-* A9RG03_PHYPA) Solyc03g078600.3 0 0 0 1 8 0 0 0 0 0 0 0 0 0 1 Sugar transporter protein 14 Solyc03g078610.3 590 598 924 774 677 732 774 739 920 649 908 981 627 776 623 Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2 (AHRD V3.3 *** A0A2G2X511_CAPBA) AT4G39860 Solyc03g078620.1 7 7 1 7 0 0 0 0 0 0 0 0 2 2 10 C2 calcium/lipid-binding domain, CaLB (AHRD V3.3 *** A0A2U1M378_ARTAN) AT5G65030 Solyc03g078623.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3AQH1_CEPFO) Solyc03g078625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic translation initiation factor 4G (AHRD V3.3 *-* A0A2G3DIY4_CAPCH) Solyc03g078627.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc03g078630.3 233 193 227 213 61 40 49 56 213 188 245 137 326 261 268 Polyubiquitin (AHRD V3.3 *-* A0A2G3B1S8_CAPCH) Solyc03g078635.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3JSN7_NOCCA) Solyc03g078640.1 1888 2589 1915 3186 2447 1889 2141 2591 2220 2370 3405 1957 2896 1993 2410 cell wall integrity/stress response component-like protein (AHRD V3.3 *-* AT4G39840.1) AT4G39840 Solyc03g078650.4 176 379 444 303 568 493 508 587 569 295 597 392 361 469 636 DUF620 domain-containing protein (AHRD V3.3 *** A0A1Q3AM34_CEPFO) AT5G05840 Solyc03g078670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g078690.4 5 10 28 22 29 16 21 24 21 17 22 29 26 18 5 Glycosyltransferase (AHRD V3.3 *-* A0A328E199_9ASTE) Solyc03g078700.2 0 1 1 0 7 0 7 0 0 2 29 4 0 2 0 Unknown protein Solyc03g078710.3 2 8 8 17 16 35 12 14 17 9 35 11 14 36 20 Glycosyltransferase (AHRD V3.3 *-* A0A328E199_9ASTE) Solyc03g078720.4 62 89 50 69 80 113 113 115 97 90 41 54 80 63 185 Glycosyltransferase (AHRD V3.3 *** A0A288W8G3_GARJA) Solyc03g078730.3 19 26 31 40 52 51 72 25 34 25 36 35 45 34 52 Glycosyltransferase (AHRD V3.3 *-* A0A2U1NU39_ARTAN) Solyc03g078770.3 12 47 12 36 16 11 13 15 56 53 2 18 39 22 20 Glycosyltransferase (AHRD V3.3 *** A0A288W8G3_GARJA) Solyc03g078780.3 113 294 153 146 94 109 85 84 232 175 148 257 225 146 77 UDP-glycosyltransferase 76C4-like (AHRD V3.3 *** A0A2I4EQP1_9ROSI) AT3G11340 Solyc03g078783.1 199 176 122 222 126 122 119 89 141 221 155 141 146 143 83 Unknown protein Solyc03g078787.1 3 0 0 3 2 1 1 1 0 1 0 0 0 0 0 Unknown protein Solyc03g078800.2 17 186 72 101 128 188 194 110 343 174 237 211 64 85 58 Glycosyltransferase (AHRD V3.3 *** U5NH37_CATRO) Solyc03g078810.4 1 4 0 0 4 2 5 2 7 2 7 8 1 0 0 UDP-glycosyltransferase 76C4-like (AHRD V3.3 *** A0A2I4EQP1_9ROSI) AT3G11340 Solyc03g078815.1 201 146 112 154 98 97 111 114 76 182 76 121 152 93 69 Unknown protein Solyc03g078820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g078830.1 56 57 167 129 34 68 65 35 80 94 260 44 68 105 94 UPF0481 protein At3g47200-like (AHRD V3.3 *** A0A2I4FE23_9ROSI) Solyc03g078840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein%2C putative (DUF247) (AHRD V3.3 --* AT3G47200.2) Solyc03g079850.4 452 213 260 282 161 159 148 135 212 249 242 155 276 243 258 guanylyl cyclase AT5G05930 Solyc03g079860.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 DUF616 domain-containing protein (AHRD V3.3 *-* A0A1Q3BIE2_CEPFO) Solyc03g150136.1 56 53 60 44 44 55 62 33 37 32 47 40 63 61 43 Unknown protein Solyc03g079870.1 0 4 0 6 4 2 0 6 0 3 1 0 0 2 0 Unknown protein Solyc03g079880.4 17 15 222 406 8 8 4 3 82 52 147 21 36 98 746 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein (AHRD V3.3 *** A0A103YIU0_CYNCS) AT3G53980 Solyc03g079883.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3DEI6_NOCCA) Solyc03g079887.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VJ33_9ASPA) ATMG00810 Solyc03g079890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** A0A2G2Z4S9_CAPAN) Solyc03g079900.3 0 0 2 7 21 17 15 13 10 5 1 8 1 6 3 Ras GTPase (AHRD V3.3 *** K2QMU3_MACPH) Solyc03g079910.3 45 57 105 70 64 69 92 34 75 58 85 78 42 83 115 Protein DA1-related 2 (AHRD V3.3 *** A0A1U8G1T8_CAPAN) AT2G39830 Solyc03g079915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3INL5_COCAP) Solyc03g079920.3 570 688 664 680 750 818 812 849 551 566 600 545 557 643 578 WD40 repeat (AHRD V3.3 *** A0A200R4W9_9MAGN) AT5G05970 Solyc03g079930.3 1834 3253 2428 1625 1528 1366 1445 1533 1479 1553 1496 1613 4191 3280 2290 Mitochondrial glycoprotein (AHRD V3.3 *** A0A200QYU1_9MAGN) AT2G39795 Solyc03g079940.3 3296 2381 2656 1748 1529 1408 1399 1491 1532 1726 1633 1712 2339 1980 2523 mitochondrial import inner membrane translocase subunit TIM22-like (AHRD V3.3 *** A0A2I4GFQ5_9ROSI) AT5G24650 Solyc03g079950.4 452 501 460 487 592 490 533 476 494 343 424 384 483 658 393 Double-stranded DNA binding protein (AHRD V3.3 *-* F4KH76_ARATH) AT5G24630 Solyc03g079960.4 11 15 108 36 42 48 27 17 29 39 49 24 23 25 94 Thaumatin-like protein 1 (AHRD V3.3 *** A0A1U8FYI6_CAPAN) AT5G24620 Solyc03g079970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT3G49550.1) AT3G49550 Solyc03g079980.2 0 1 0 0 0 0 0 2 0 2 0 0 15 6 1 DUF599 domain-containing protein (AHRD V3.3 *** A0A1Q3CKV5_CEPFO) AT5G24600 Solyc03g080000.1 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 DUF599 domain-containing protein (AHRD V3.3 *** A0A1Q3DBK6_CEPFO) AT5G24600 Solyc03g080010.3 1236 814 823 766 717 706 896 639 735 607 721 649 686 1010 1050 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200R035_9MAGN) AT5G54090 Solyc03g080020.4 92 77 103 88 76 72 51 59 83 83 58 41 107 79 107 Major facilitator superfamily domain, general substrate transporter (AHRD V3.3 *-* A0A0A2K2T0_PENEN) Solyc03g080030.4 0 5 27 0 0 0 3 1 0 0 0 0 3 0 2 major latex allergen Hev b 5-like (AHRD V3.3 *-* XP_004235040.1) Solyc03g080040.1 351 332 389 519 471 451 438 411 250 580 415 434 264 329 368 Serine protease inhibitor, Kazal-type family protein (AHRD V3.3 *-* Q9M267_ARATH) AT4G01575 Solyc03g080050.3 3558 3230 2720 2610 2247 2089 2424 3188 1974 2955 2557 2746 3245 3499 2331 Stomatin family protein (SPFH domain/Band 7 family protein) (AHRD V3.3 *** A0A166USA6_9PEZI) AT4G27585 Solyc03g080060.1 867 419 204 299 417 324 417 430 416 553 283 258 287 282 488 L-type lectin-domain containing receptor kinase VIII.2-like (AHRD V3.3 *** A0A2I4F917_9ROSI) Solyc03g080070.4 0 0 11 0 0 1 0 0 2 1 5 0 0 0 0 WAT1-related protein (AHRD V3.3 *** K4BHY3_SOLLC) Solyc03g080080.4 368 260 333 246 426 469 471 409 405 242 371 233 277 301 294 Calcium-binding endonuclease/exonuclease/phosphatase family (AHRD V3.3 *** F4JYU5_ARATH) AT5G54130 Solyc03g080090.4 4427 2249 3983 2204 1869 1946 1787 1986 2555 4028 3036 2302 2907 2474 2710 NAC domain-containing protein 86 (AHRD V3.3 *** A0A2G2X7Q8_CAPBA) AT1G33060 Solyc03g080100.4 102 85 50 91 168 143 138 115 147 102 174 103 84 102 464 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6RSC8_ACTCH) AT5G24580 Solyc03g080110.3 11 15 45 26 20 23 10 9 19 19 64 2 13 16 54 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6RSE0_ACTCH) Solyc03g080113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g080117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc03g080120.1 50 44 63 72 32 56 56 42 21 47 44 46 14 13 23 Unknown protein Solyc03g080130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A167NIB9_9SOLA) Solyc03g080140.3 2975 1723 1511 1621 1388 1403 1404 1567 1889 2335 1616 1686 1482 1768 1755 Peroxidase (AHRD V3.3 *** A0A2N9EG96_FAGSY) Solyc03g080150.3 0 11 39 8 92 56 60 70 7 12 11 27 2 8 20 Peroxidase (AHRD V3.3 *** K4BHZ1_SOLLC) Solyc03g080160.3 2062 5333 4931 3728 4753 4639 4620 4384 3134 2335 3733 3348 5242 4909 4276 Nascent polypeptide-associated complex subunit alpha-like protein (AHRD V3.3 *** A0A2K3M7R5_TRIPR) AT3G49470 Solyc03g080170.3 58 64 149 60 118 85 112 101 57 62 51 82 98 75 74 hypothetical protein (AHRD V3.3 *** AT4G27660.1) AT4G27660 Solyc03g080175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3D9Z8_CEPFO) Solyc03g080180.4 522 510 694 526 657 553 551 501 554 643 587 467 556 501 963 O-methyltransferase, putative (AHRD V3.3 *** B9SIJ9_RICCO) AT5G54160 Solyc03g080190.3 868 672 840 302 31 41 78 18 261 1179 2469 58 1152 872 337 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QGX7_ARTAN) AT5G24530 Solyc03g080195.1 92 150 35 66 67 98 112 81 56 29 47 75 48 70 25 Unknown protein Solyc03g081190.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc03g081200.3 85 73 44 126 64 80 93 62 50 94 53 41 51 58 52 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 --* AT5G24520.4) Solyc03g081210.1 56 51 47 55 20 26 37 13 24 38 52 37 46 64 24 WD40 repeat protein (AHRD V3.3 *** Q1JV05_IPOPU) Solyc03g081220.1 370 485 341 831 402 358 459 356 274 655 283 356 365 400 261 RING-H2 zinc finger protein (AHRD V3.3 *** AT5G24460.1) AT5G24460 Solyc03g081230.1 476 576 387 520 1422 1020 852 966 373 379 333 577 537 382 337 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9SVC8_ARATH) AT5G53730 Solyc03g081240.3 1599 587 755 1027 102 107 101 91 1122 947 842 1118 507 1096 1170 Two-component response regulator-like APRR9 (AHRD V3.3 *** A0A2G2X7Z8_CAPBA) AT5G24470 Solyc03g081250.3 13 20 21 33 12 10 20 6 36 9 53 48 37 36 47 Subtilisin-like protease SBT3.3 (AHRD V3.3 *** A0A2G2X898_CAPBA) Solyc03g081260.4 1343 4300 4356 5184 15887 14147 17315 12259 6838 3044 7052 6573 3021 4403 3938 Subtilisin-like protease SBT3.5 (AHRD V3.3 *** A0A1U8FZF7_CAPAN) AT1G32950 Solyc03g081270.2 68 58 42 60 15 27 34 21 42 53 77 47 35 57 28 Two-component response regulator-like APRR9 (AHRD V3.3 *-* A0A1U8G692_CAPAN) Solyc03g081290.1 11 4 3 3 7 0 9 10 3 0 0 2 8 7 1 Unknown protein Solyc03g081300.4 285 254 229 283 237 229 262 286 248 273 360 263 228 225 193 Mitochodrial transcription termination factor-related protein (AHRD V3.3 *** A0A2U1LA74_ARTAN) AT5G54180 Solyc03g081310.3 297 436 455 457 443 461 454 453 424 370 392 505 386 459 390 fantom protein (AHRD V3.3 *** AT5G24500.1) AT5G24500 Solyc03g081320.3 1003 588 570 525 567 692 619 648 648 959 763 699 528 707 1042 Polyketide cyclase/dehydrase and lipid transport superfamily protein (AHRD V3.3 *** Q9XIR9_ARATH) Solyc03g081330.1 97 60 60 43 28 18 19 21 20 52 66 17 86 46 64 Avr9/Cf-9 rapidly elicited protein (AHRD V3.3 -** AT5G54165.1) AT5G54165 Solyc03g081340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g081345.1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 mitochondrial import inner membrane translocase subunit Tim16-like (AHRD V3.3 *** A0A2I4ETD7_9ROSI),Pfam:PF03656 Solyc03g082340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g082350.2 25 10 34 36 15 12 12 13 8 20 6 15 5 14 35 Avr9/Cf-9 rapidly elicited protein 65 (AHRD V3.3 *** Q9FQZ0_TOBAC) Solyc03g082360.1 0 3 0 3 2 1 6 0 0 0 0 0 0 0 0 Unknown protein Solyc03g082370.1 969 274 151 63 0 1 1 1 6 34 460 269 43 122 160 Avr9/Cf-9 rapidly elicited protein 65 (AHRD V3.3 *** Q9FQZ0_TOBAC) AT5G54165 Solyc03g082375.1 4 0 2 0 2 0 1 4 3 1 0 0 2 1 0 60S acidic ribosomal protein P1 (AHRD V3.3 *** A0A2G3A027_CAPAN) Solyc03g082380.4 7355 4456 3937 3541 2951 3181 3307 2489 2861 2441 3759 2424 4302 4056 4871 Serine/arginine-rich-splicing factor SR34A (AHRD V3.3 *** A0A0M8KRL2_NICAT) AT3G49430 Solyc03g082390.3 675 739 892 734 981 807 666 945 1304 970 651 1140 1093 1046 520 Polyadenylate-binding protein-interacting protein 12 (AHRD V3.3 *** A0A2G3CXR6_CAPCH) AT1G32790 Solyc03g082400.3 1681 1017 1204 1050 1067 1104 1059 1093 1373 1435 1033 1375 1316 1337 1238 heat shock protein 21 AT1G32790 Solyc03g082410.3 24 20 34 41 26 44 54 15 20 19 58 23 22 24 35 Heat shock induced transcript 2 (AHRD V3.3 *-* Q96486_SOLLC) Solyc03g082420.3 38 302 186 128 243 154 176 174 512 37 88 222 114 251 186 Small heat shock protein, chloroplastic (AHRD V3.3 *** HS21C_SOLLC) AT4G27670 Solyc03g082430.1 1099 2258 1583 1516 3342 3754 3984 3142 3418 1201 1467 2660 2154 2497 916 Growth-regulating factor 5 (AHRD V3.3 *** A0A2G3A035_CAPAN) Solyc03g082435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc03g082440.1 812 1517 1005 1281 1233 1127 978 1349 1496 1486 990 1498 1352 1210 987 Seven transmembrane receptor (AHRD V3.3 *** E5RDD0_CUCME) AT5G42090 Solyc03g082445.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein kinase (AHRD V3.3 *-* A0A1U7W351_NICSY) Solyc03g082450.3 32 73 74 66 91 94 84 66 130 87 93 128 65 115 116 systemin receptor 2 Solyc03g082460.1 3 9 0 0 0 1 1 2 0 0 1 6 2 4 0 Unknown protein Solyc03g082470.4 28 23 44 38 7 9 2 7 21 9 38 14 16 36 50 systemin receptor 1 Solyc03g082480.4 1301 2139 1432 1447 2462 2039 1879 2679 1873 1715 1296 2216 2645 2050 1213 GRF1-interacting factor 1 (AHRD V3.3 *** A0A2G3CXT5_CAPCH) Solyc03g082490.4 7452 5850 5370 5352 5694 5606 5590 6655 5953 6434 5003 6299 5124 5715 4700 RNA polymerase II degradation factor (AHRD V3.3 *** AT5G53620.3) AT5G53620 Solyc03g082500.4 502 648 781 561 594 691 599 720 593 667 605 616 578 559 417 serine/threonine protein kinase pk23 AT5G24430 Solyc03g082510.1 58 53 40 126 73 70 42 17 26 27 75 25 48 41 130 Small auxin up-regulated RNA35 AT4G00880 Solyc03g082515.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VDL0_9ASPA) ATMG00810 Solyc03g082520.1 29 32 23 10 13 5 0 3 4 16 64 26 10 11 17 Small auxin up-regulated RNA36 Solyc03g082530.1 42 23 22 10 0 0 5 0 2 7 30 17 6 11 9 Small auxin up-regulated RNA37 Solyc03g082540.4 3514 2373 2729 3159 1823 1919 2203 1752 2074 3002 2952 3251 2570 2740 2523 plasminogen activator inhibitor (AHRD V3.3 *-* AT1G57680.3) Solyc03g082550.3 186 110 22 35 0 1 1 0 26 31 16 1 126 242 460 Homeobox-leucine zipper protein HOX6 (AHRD V3.3 *** A0A2G3A038_CAPAN) Solyc03g082560.3 262 237 215 164 135 112 155 95 192 166 280 100 141 231 538 Aldo-keto reductase/ oxidoreductase (AHRD V3.3 *** B6TN73_MAIZE) AT5G53580 Solyc03g082570.4 1845 4174 3297 2322 3546 3310 3544 3203 2492 2280 2683 2963 4932 4007 3090 Ubiquitin (AHRD V3.3 *** B2W3N0_PYRTR) AT3G52590 Solyc03g150137.1 0 1 0 1 1 1 0 0 2 0 0 0 4 0 0 Unknown protein Solyc03g082580.3 996 1311 1251 1454 1586 1738 1660 1743 1662 1453 1411 1612 1373 1452 1083 6-phosphogluconolactonase (AHRD V3.3 *** B6UAK0_MAIZE) AT5G24400 Solyc03g082590.4 2043 1945 1828 2112 2059 2664 2418 2307 2275 2084 2364 2037 1851 1953 2241 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1QCL8_ARTAN) AT3G49350 Solyc03g082600.4 1588 2327 2017 1869 2051 2085 1917 1706 1971 1872 2692 2110 3154 2379 2100 Cytochrome b5 (AHRD V3.3 *** A0A2G3A011_CAPAN) AT5G53560 Solyc03g082610.1 1003 1102 829 2042 1267 1360 1195 1369 698 2157 694 1117 1297 929 436 Senescence regulator S40 (AHRD V3.3 *** A0A200QWC0_9MAGN) Solyc03g082620.4 472 830 508 797 681 510 316 613 653 961 1005 393 928 893 1712 Metal-nicotianamine transporter YSL1 (AHRD V3.3 *** A0A2G2X7E8_CAPBA) AT5G53550 Solyc03g082630.3 248 346 286 328 434 433 399 315 320 226 224 282 450 389 252 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LUP2_ARTAN) Solyc03g082640.3 51 61 62 40 99 93 69 72 63 46 112 34 95 78 103 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NSJ9_ARTAN) Solyc03g082650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin fusion degradation protein 1-like protein (AHRD V3.3 *-* A0A2G3AH19_CAPAN) Solyc03g082660.3 1741 4518 7675 5147 5893 5317 5170 4478 4312 4088 8113 3578 4124 3647 4492 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1QCK3_ARTAN) AT4G27720 Solyc03g082670.3 232 160 279 326 137 208 231 133 258 211 364 192 209 198 450 F-box-like domain-containing protein (AHRD V3.3 *** A0A1Q3CRF0_CEPFO) Solyc03g082680.4 728 736 978 790 903 900 947 834 962 667 751 812 624 825 990 neuroblastoma-amplified sequence protein (AHRD V3.3 *** AT5G24350.3) AT5G24350 Solyc03g082690.3 881 452 606 298 47 50 35 56 279 598 561 95 1153 554 473 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2X7G1_CAPBA) Solyc03g082700.4 5 3 16 6 6 1 2 3 4 1 26 6 1 4 0 Oligopeptide transporter (AHRD V3.3 *** A0A200RD47_9MAGN) Solyc03g082710.4 1583 1056 802 951 718 811 730 781 754 1096 1009 1103 889 901 923 RNA-binding protein 1-like (AHRD V3.3 *** A0A2I4GFY9_9ROSI) Solyc03g082720.3 753 290 403 545 158 170 167 153 285 668 397 237 672 400 800 Protein yippee-like (AHRD V3.3 *** A0A1U8G6J2_CAPAN) AT4G27740 Solyc03g082730.1 69 40 32 37 99 37 36 39 23 58 26 58 15 34 33 Unknown protein Solyc03g082740.3 79 53 78 77 66 117 83 84 56 82 106 70 58 47 83 Protein yippee-like (AHRD V3.3 *** A0A1U8FYV8_CAPAN) Solyc03g082750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 27 Solyc03g082760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 22-like (AHRD V3.3 *-* XP_004235113.1) Solyc03g082770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Dif10 (AHRD V3.3 *-* Q43504_SOLLC) Solyc03g082780.3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 Cf-like protein (AHRD V3.3 *** A0A140GMU4_SOLLC) Solyc03g082790.4 0 0 0 1 0 0 0 0 0 0 2 0 1 0 0 extensin-like 54 Solyc03g082800.2 1 1 0 0 0 3 0 0 0 0 0 1 0 0 0 Unknown protein Solyc03g082805.1 2 0 0 0 0 0 0 0 0 1 2 0 1 0 0 Unknown protein Solyc03g082810.1 0 0 0 2 0 1 0 0 1 0 0 1 0 0 0 WRKY transcription factor 26 Solyc03g082820.3 629 566 578 614 569 636 604 548 477 639 671 570 566 524 536 Impaired sucrose induction 1-like protein (AHRD V3.3 *** Q5TJC6_SOLTU) AT4G27750 Solyc03g082830.2 58 72 89 73 65 50 47 56 71 65 67 45 89 86 75 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q798_9MAGN) Solyc03g082840.3 148 169 389 159 129 156 137 154 184 168 231 179 301 302 201 Dof zinc finger protein (AHRD V3.3 *** A0A068PXR9_TOBAC) Solyc03g082845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc03g082850.3 925 708 853 939 820 852 885 826 765 766 840 730 825 887 923 3'-5' exonuclease domain (AHRD V3.3 *** A0A200Q766_9MAGN) AT5G24340 Solyc03g082860.3 13 380 422 341 560 617 623 534 426 139 222 469 176 446 157 Histone-lysine N-methyltransferase ATXR6-like protein (AHRD V3.3 *** A0A2K3P9S3_TRIPR) AT5G24330 Solyc03g082870.4 448 474 584 555 583 735 748 602 551 544 506 520 497 579 517 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PGZ8_ARTAN) AT5G24320 Solyc03g082880.1 131 83 241 170 137 168 129 72 53 118 224 101 112 124 159 Unknown protein Solyc03g082890.3 274 210 255 204 401 398 380 447 262 335 374 360 145 139 218 Thylakoid lumenal 17.4 kDa protein, chloroplastic (AHRD V3.3 *** A0A2G3CX11_CAPCH) AT5G53490 Solyc03g082900.3 136 80 126 170 150 167 222 136 90 121 173 131 42 125 174 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A2G2X7H4_CAPBA) Solyc03g082910.4 662 589 552 504 469 485 500 656 507 560 562 581 704 502 490 Acyl-CoA-binding domain-containing protein 2 (AHRD V3.3 *** A0A2G3CX14_CAPCH) AT5G53470 Solyc03g082920.4 1291 2735 1725 1387 2176 2057 1894 2508 2569 1697 1807 2603 5654 3770 2600 Heat shock protein 70 family (AHRD V3.3 *** A0A200QNK9_9MAGN) AT5G42020 Solyc03g082940.3 1337 1623 1130 964 1213 1370 1347 1512 1281 1151 1132 1184 1405 1334 911 Importin subunit beta-1 (AHRD V3.3 *** A0A2G3CX18_CAPCH) AT5G53480 Solyc03g082945.1 39 38 221 198 0 1 1 0 8 7 64 2 29 23 178 protein PSY2-like (AHRD V3.3 -** XP_021614131.1) Solyc03g082960.2 934 700 742 671 791 652 721 626 686 708 689 559 654 600 931 Protein phosphatase-2C (AHRD V3.3 *** O82471_MESCR) AT4G27800 Solyc03g082970.4 176 391 382 234 259 292 227 274 310 156 277 209 367 376 360 Plastid transcriptionally active protein 7 (AHRD V3.3 *** A0A2K3PR76_TRIPR) AT5G24314 Solyc03g082980.3 3163 2930 3078 2685 3318 3591 3251 3425 2924 2672 2969 2651 3427 3251 2770 KH domain-containing protein (AHRD V3.3 *** A0A1J3F327_NOCCA) AT5G53060 Solyc03g082990.3 292 271 283 214 217 243 233 230 233 179 243 244 187 273 288 Nephrocystin-3 (AHRD V3.3 *** A0A1J3CQK4_NOCCA) AT5G53080 Solyc03g083000.3 3091 844 957 684 365 488 429 366 752 1368 818 747 798 861 843 Transmembrane protein (AHRD V3.3 *-* F4IJ67_ARATH) Solyc03g083010.3 263 217 726 252 310 225 234 243 258 364 230 185 186 182 254 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9LVU7_ARATH) AT5G53050 Solyc03g083020.3 143 336 419 286 501 414 416 344 197 177 278 222 382 323 207 EKC/KEOPS complex subunit LAGE3 (AHRD V3.3 *** A0A1J3GAR7_NOCCA) AT5G53045 Solyc03g083030.3 534 831 932 1118 892 891 879 853 905 917 1253 914 1083 770 1367 ABL interactor-like protein 3 (AHRD V3.3 *** AT5G24310.1) AT5G24310 Solyc03g083040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant regulator RWP-RK (AHRD V3.3 *-* A0A1R3K1I8_COCAP) Solyc03g083050.3 36 43 17 44 17 11 20 17 49 21 76 31 9 22 13 hypothetical protein (AHRD V3.3 *** AT5G53030.1) AT5G53030 Solyc03g083060.3 268 230 158 229 45 102 85 62 182 153 146 106 195 161 261 Ribonuclease P protein subunit P38-like protein (AHRD V3.3 *** AT5G53020.9) AT5G53020 Solyc03g083070.3 456 457 671 597 676 708 607 571 514 466 743 582 557 564 644 Vesicle-associated membrane protein (AHRD V3.3 *-* A0A1Y1IL63_KLENI) AT4G27840 Solyc03g083080.1 3 0 1 3 7 1 0 1 2 0 0 0 0 3 0 isoleucine--tRNA ligase, chloroplastic/mitochondrial (AHRD V3.3 --* XP_020871410.1) Solyc03g083090.4 437 726 1135 1014 678 884 919 742 1350 553 986 949 788 1028 950 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** K4BI85_SOLLC) AT5G24300 Solyc03g083100.3 180 158 278 402 193 176 146 130 279 145 291 287 122 194 408 SUN-like protein 10 AT3G49260 Solyc03g083110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AP2/B3 transcription factor family protein (AHRD V3.3 *** A0A2U1MEM3_ARTAN) AT1G51120 Solyc03g083120.3 19 5 0 1 11 6 10 5 20 22 22 12 25 20 5 gamma-irradiation and mitomycin c induced 1 (AHRD V3.3 *-* AT5G24280.3) Solyc03g083130.3 380 276 365 250 132 122 171 108 336 230 420 248 393 402 398 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *** A0A1J3I4J6_NOCCA) AT5G24280 Solyc03g083140.3 695 428 274 301 268 269 307 201 291 233 311 185 303 427 449 Unknown protein Solyc03g083160.3 28 19 40 52 23 28 44 30 28 26 30 21 10 12 15 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X10 (AHRD V3.3 *-* XP_025885714.1) Solyc03g083170.3 167 169 152 138 180 208 218 182 148 179 127 191 111 143 106 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *** A0A2G2X789_CAPBA) AT3G49250 Solyc03g083180.1 57 22 36 36 17 29 50 17 45 74 81 68 51 29 33 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X7 (AHRD V3.3 *-* XP_025885711.1) Solyc03g083190.3 158 134 116 138 109 121 86 84 147 151 100 144 76 119 168 gamma-irradiation and mitomycin c induced 1 (AHRD V3.3 *-* AT5G24280.3) Solyc03g083200.4 257 176 200 194 119 184 189 102 160 162 228 183 114 159 234 En/Spm-like transposon (AHRD V3.3 *-* AT5G24275.4) Solyc03g083210.3 1118 1464 1470 1158 1658 1393 1308 1559 1530 1175 1268 1879 1395 1646 1438 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *** A0A1U8FYZ2_CAPAN) AT3G49250 Solyc03g083215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g083240.4 1051 1377 1270 1350 1147 1312 1557 1304 1574 1010 1179 1193 1198 1419 1047 Transcription factor jumonji (JmjC) domain-containing protein (AHRD V3.3 *** Q8VYB9_ARATH) AT4G00990 Solyc03g083250.3 1261 1024 1112 1106 793 794 730 902 1356 1312 939 1399 1080 1307 899 ATP-dependent Clp protease ATP-binding subunit ClpX (AHRD V3.3 *** A0A2G3CX42_CAPCH) AT5G53350 Solyc03g083260.1 118 160 204 100 141 189 117 155 116 81 190 117 139 177 224 coiled-coil protein (AHRD V3.3 *-* AT2G31410.1) Solyc03g083270.4 378 317 407 461 416 430 442 369 421 421 376 373 362 348 355 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G2X7A7_CAPBA) AT3G61790 Solyc03g083275.1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 Unknown protein Solyc03g083280.4 832 1705 1097 1935 1363 1303 1324 1609 1254 1735 1001 1648 1809 1733 1058 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CX51_CAPCH) Solyc03g083290.4 416 645 717 591 663 675 695 589 612 480 669 627 736 603 546 40S ribosomal protein S12 (AHRD V3.3 *** A0A2G2W8S0_CAPBA) AT2G32060 Solyc03g083300.3 873 888 1047 782 1144 1275 1150 742 643 786 1132 741 966 729 963 Mediator of RNA polymerase II transcription subunit 22a (AHRD V3.3 *** A0A2G2X797_CAPBA) AT1G16430 Solyc03g083310.4 1015 908 561 542 587 521 490 638 631 602 532 498 881 731 535 Zinc finger, C2H2 (AHRD V3.3 *** A0A2U1PHW7_ARTAN) AT4G06634 Solyc03g083320.4 2 3 6 15 4 10 3 0 1 3 1 3 0 1 40 calcium sensor calcineurin B AT5G24270 Solyc03g083330.3 733 501 518 581 404 588 520 588 570 484 662 483 533 623 796 Dipeptidyl peptidase (AHRD V3.3 *** A0A1Y1HMI5_KLENI) AT5G24260 Solyc03g083340.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* V4P895_EUTSA) Solyc03g083350.3 1128 465 359 454 447 408 363 408 529 712 429 574 386 341 479 phosphatidylinositol 4-kinase gamma 4-like (AHRD V3.3 *** A0A2I4FK44_9ROSI) AT5G24240 Solyc03g083360.3 440 206 359 637 64 90 59 54 328 289 1005 95 198 188 822 Pectinesterase (AHRD V3.3 *** A0A2G3CX60_CAPCH) AT5G53370 Solyc03g083370.3 6 49 20 33 51 41 29 29 5 14 3 17 8 8 7 GDSL esterase/lipase (AHRD V3.3 *** A0A1U8G8S0_CAPAN) AT5G24230 Solyc03g083380.4 46 61 62 81 83 73 82 72 14 54 18 64 26 63 46 O-acyltransferase WSD1-like (AHRD V3.3 *** A0A2I4DRV2_9ROSI) AT5G53390 Solyc03g083390.4 3376 2664 3063 2379 3155 3229 2858 2822 2478 2312 2236 2425 3125 2921 2530 Nuclear migration protein nudC (AHRD V3.3 *** A0A1U8FZY1_CAPAN) AT5G53400 Solyc03g083400.3 514 435 489 464 363 315 238 371 498 476 575 530 431 456 494 CCT motif protein (AHRD V3.3 *** A0A2K3PQC2_TRIPR) AT5G53420 Solyc03g083410.3 910 821 694 740 555 729 760 697 817 702 767 704 648 896 709 Histone-lysine N-methyltransferase (AHRD V3.3 *** A0A2G2ZZR3_CAPAN) AT4G27910 Solyc03g083420.4 1075 591 624 543 339 456 463 399 558 615 636 462 574 635 765 OBP3-responsive protein 1 (AHRD V3.3 *** AT5G53450.1) AT5G53450 Solyc03g083430.3 4784 3677 2971 2341 2788 2838 2495 2797 3147 3051 2772 3080 3274 3434 3732 splicing factor SF3a60 homolog (AHRD V3.3 *** A0A2I4H3P3_9ROSI) AT5G06160 Solyc03g083440.4 5678 5832 4418 5018 4582 5374 5684 5092 3648 5766 4467 4313 7014 8927 5715 Glutamate synthase (AHRD V3.3 *** A0A2U1PKW7_ARTAN) AT5G53460 Solyc03g083445.1 0 4 0 3 3 0 0 2 0 0 5 3 2 3 0 Unknown protein Solyc03g083450.1 188 154 187 152 119 114 94 85 162 138 141 96 250 195 192 Succinate dehydrogenase assembly factor 4, mitochondrial (AHRD V3.3 *** A0A2G3CX04_CAPCH) AT5G67490 Solyc03g083460.3 170 130 214 127 38 31 21 39 79 141 169 41 459 189 156 RING/U-box superfamily protein (AHRD V3.3 *** F4KJ04_ARATH) AT5G53110 Solyc03g083470.3 138 18 63 21 0 1 9 1 10 38 166 11 24 22 45 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3NJB3_TRIPR) Solyc03g083480.4 164 29 16 6 0 0 0 1 3 5 90 18 8 6 18 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 (AHRD V3.3 *** A0A1U8FAX0_CAPAN) Solyc03g083485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc03g083490.3 4 0 2 3 1 4 5 0 7 1 6 2 0 1 0 DUF1442 domain-containing protein (AHRD V3.3 *** A0A1Q3BAQ3_CEPFO) Solyc03g083500.3 1 0 0 0 0 0 2 1 2 0 5 0 0 1 0 DUF1442 domain-containing protein (AHRD V3.3 *** A0A1Q3BAQ3_CEPFO) AT5G62280 Solyc03g083510.4 141 324 289 196 638 519 508 809 453 317 301 557 157 241 125 Leucine rich repeat receptor kinase, putative (AHRD V3.3 *** B9RDB7_RICCO) Solyc03g083520.4 1806 2687 2542 2454 3593 2867 2899 3641 3036 2497 2343 3019 3104 2572 1896 Calmodulin (AHRD V3.3 *** B6T4U8_MAIZE) AT1G12310 Solyc03g083530.3 6646 7081 8257 6515 7809 8504 7650 6905 5693 6357 6822 6609 6791 6130 7268 40S ribosomal protein S13 (AHRD V3.3 *** A0A2I0WN36_9ASPA) AT4G00100 Solyc03g083540.3 778 963 805 673 783 861 750 798 575 738 444 706 1439 952 616 Chloride conductance regulatory protein ICln (AHRD V3.3 *** A0A2G3CVQ4_CAPCH) AT5G62290 Solyc03g083550.1 68 108 111 133 130 121 132 105 84 83 101 119 100 127 91 UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** A0A1J3F7T2_NOCCA) Solyc03g083560.1 1893 5939 8284 5383 7315 6446 5906 7620 5299 3124 5117 7644 3554 5210 3233 Protein EXORDIUM-like 7 (AHRD V3.3 *** A0A2G2X692_CAPBA) AT5G51550 Solyc03g083570.3 266 351 200 292 259 197 239 285 268 259 187 340 337 256 203 Protein LOW PSII ACCUMULATION 2, chloroplastic (AHRD V3.3 *** A0A2G3CVQ8_CAPCH) AT5G51545 Solyc03g083580.3 585 499 379 359 383 353 420 358 364 357 347 362 456 447 469 Peptidase_M3 domain-containing protein (AHRD V3.3 *** A0A1Q3BAD5_CEPFO) AT5G51540 Solyc03g083590.3 30 93 96 126 205 162 144 147 160 82 73 148 124 128 37 Protein kinase domain (AHRD V3.3 *** A0A200RA50_9MAGN) AT5G62310 Solyc03g083610.4 741 1081 1198 1473 1163 1362 1624 1045 1302 1010 1447 1323 950 1409 1430 UMP-CMP kinase (AHRD V3.3 *** A0A2G2ZYL4_CAPAN),Pfam:PF00406 AT4G25280 Solyc03g083620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc03g083640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g083650.4 37 100 135 94 59 104 82 120 208 101 96 133 61 152 121 Glycosyltransferase (AHRD V3.3 *** U5NH37_CATRO) Solyc03g083660.1 0 0 0 0 0 0 0 0 1 0 0 2 4 2 0 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A2U1KPL8_ARTAN) AT4G25250 Solyc03g083670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g083680.1 46 18 14 15 0 0 1 0 9 12 124 4 20 18 26 Unknown protein Solyc03g083690.1 1 0 6 0 0 0 0 0 0 4 0 0 0 0 0 Unknown protein Solyc03g083700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A2U1KPL8_ARTAN) AT4G25250 Solyc03g083710.1 3 1 2 4 0 0 0 0 3 11 25 0 0 0 0 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A2U1LKC0_ARTAN) AT4G25250 Solyc03g083720.1 65 483 761 1033 1039 875 798 1193 791 293 788 675 161 427 330 Plant invertase/pectin methylesterase inhibitor superfamily protein, putative (AHRD V3.3 *** A0A061G4U8_THECC) Solyc03g083725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc03g083730.1 67 22 51 1 0 0 0 0 2 8 128 8 1 25 13 Plant invertase/pectin methylesterase inhibitor superfamily protein, putative (AHRD V3.3 *** A0A061G4U8_THECC) AT5G62360 Solyc03g083735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *-* A0A2U1LYV9_ARTAN) Solyc03g083770.1 1662 1358 7304 7192 304 283 453 213 9510 1681 13206 6309 1710 4233 7860 Plant invertase/pectin methylesterase inhibitor superfamily protein, putative (AHRD V3.3 *** A0A061G4U8_THECC) AT5G62360 Solyc03g083780.1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 Unknown protein Solyc03g150138.1 0 4 11 15 0 2 0 1 0 2 1 0 12 3 11 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc03g083810.4 0 0 1 1 0 0 0 0 0 2 0 0 3 0 2 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc03g083820.3 0 0 14 0 13 5 4 5 0 0 0 9 4 1 0 Endoglucanase (AHRD V3.3 *** A0A2G3CVU8_CAPCH) Solyc03g083830.1 0 0 0 4 0 0 0 2 1 0 0 0 0 0 0 Unknown protein Solyc03g083840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A1U8G949_CAPAN) AT3G47400 Solyc03g150139.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G2W4T7_CAPBA) ATMG00240 Solyc03g150140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g083850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional nitrilase/nitrile hydratase NIT4B (AHRD V3.3 *-* A0A2G2VPR2_CAPBA) Solyc03g083870.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A200QC54_9MAGN) Solyc03g083880.4 5 3 21 16 10 4 6 3 6 3 8 4 5 11 30 NAC domain-containing protein (AHRD V3.3 *** A0A2U1LJ98_ARTAN) Solyc03g083890.2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc03g083900.4 190 616 748 598 926 847 745 1033 702 559 553 700 437 476 304 monocopper oxidase-like protein SKU5 (AHRD V3.3 *** A0A2I4GW38_9ROSI) AT4G25240 Solyc03g083910.5 1321 1427 789 916 1401 1249 1324 1484 1583 1553 986 1033 872 889 1051 sucrose accumulator Solyc03g083920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4GR03_9ROSI) Solyc03g083930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc03g083960.3 112 267 624 226 772 813 699 898 183 537 402 485 233 196 208 Trehalose 6-phosphate phosphatase (AHRD V3.3 *** A0A1U8G0B4_CAPAN) AT5G51460 Solyc03g083965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L8G7_TRIPR) ATMG00240 Solyc03g083970.3 6730 10563 9979 8677 18725 14888 13742 21428 11626 10999 9082 15061 7516 9387 6854 BAG family molecular chaperone regulator 7-like (AHRD V3.3 *** A0A2I4H718_9ROSI) AT5G62390 Solyc03g083980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g083990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g083991.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g083992.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc03g083993.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g083994.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g083995.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g083996.1 12 97 233 265 212 165 194 119 35 19 66 80 12 19 8 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *-* A0A2U1PU47_ARTAN) Solyc03g083998.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g090990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g091000.1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g091010.1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g091020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g091030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g091035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g093040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g093050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g093055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g093060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g093070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc03g093075.1 1 0 3 4 0 2 1 0 1 1 2 0 8 0 0 Unknown protein Solyc03g093080.3 78 36 543 25 0 12 9 1 67 99 745 48 33 13 67 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** Q6RHY0_SOLLC) AT4G25810 Solyc03g093110.3 160 65 490 21 7 1 12 5 67 99 792 100 73 28 109 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** Q6RHY0_SOLLC) AT4G25810 Solyc03g093120.5.1 139 83 431 13 2 6 3 0 28 60 332 80 57 41 50 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** Q6RHY0_SOLLC) AT4G25810 Solyc03g093130.3 68 52 506 4 0 6 0 1 45 53 863 36 46 11 51 xyloglucan endotransglucosylase-hydrolase 3 AT4G25810 Solyc03g093140.3 275 417 335 278 189 287 245 204 245 537 110 313 230 297 211 Glycerol-3-phosphate transporter 1-like protein (AHRD V3.3 *** A0A2K3PR18_TRIPR) AT3G47420 Solyc03g093150.3 198 145 130 171 196 218 222 237 207 134 106 182 135 146 188 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1NTS8_ARTAN) AT5G62370 Solyc03g093160.3 2735 1726 1625 1098 1173 1049 919 967 1363 1183 1563 1098 1566 1411 2125 LUC7-related (AHRD V3.3 *** A0A200QTT4_9MAGN) AT5G51410 Solyc03g093170.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200QM34_9MAGN) Solyc03g093180.1 5 45 10 13 27 18 14 16 19 12 11 21 19 14 12 Peroxisomal membrane protein 11-4 (AHRD V3.3 *** A0A2G3CVP3_CAPCH) AT3G47430 Solyc03g093185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc03g093190.1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SKP1-like protein 4 (AHRD V3.3 *** A0A1U8FSC1_CAPAN) Solyc03g093200.3 469 396 408 396 281 338 336 345 416 435 455 360 414 430 573 Cell number regulator 6 (AHRD V3.3 *** A0A2G2X665_CAPBA) AT5G51400 Solyc03g093210.3 84 118 80 119 126 116 144 92 70 58 80 56 145 130 166 Nucleic acid-binding, OB-fold protein (AHRD V3.3 *** A0A2U1P2W4_ARTAN) Solyc03g093220.3 446 694 995 905 1174 1358 1255 842 536 542 808 825 609 805 1073 transmembrane protein (AHRD V3.3 *** AT3G42150.3) AT3G42150 Solyc03g093230.4 0 4 1 4 13 1 2 2 4 2 10 1 5 1 0 tonoplast intrinsic protein 5.1 AT3G47440 Solyc03g093240.4 360 348 379 405 239 274 367 257 328 354 288 320 435 480 378 nitric oxide synthase 1 AT3G47450 Solyc03g093250.2 87 417 217 261 615 493 448 834 553 400 307 654 115 282 129 Structural maintenance of chromosomes protein (AHRD V3.3 *** A0A2G2X655_CAPBA) AT5G62410 Solyc03g093260.3 438 1215 1569 2008 2177 2661 2606 2146 1164 1082 1452 1977 508 1183 821 Structural maintenance of chromosomes protein (AHRD V3.3 *-* A0A2G2X655_CAPBA) Solyc03g093270.3 0 0 0 0 0 4 0 1 0 0 1 0 0 0 0 NAD(P)-linked oxidoreductase superfamily protein (AHRD V3.3 *** A0A2U1L511_ARTAN) AT5G62420 Solyc03g093280.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Aldo/keto reductase family protein (AHRD V3.3 *** Q9FJK0_ARATH) AT5G62420 Solyc03g093290.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldo/keto reductase family protein (AHRD V3.3 *** Q9FJK0_ARATH) AT5G62420 Solyc03g093300.3 483 447 394 477 645 544 520 593 487 419 357 489 509 490 448 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** Q9FII8_ARATH) AT5G61450 Solyc03g093310.3 121 361 377 735 880 826 925 1017 386 375 375 712 103 254 211 F-box protein (AHRD V3.3 *** A0A2G3CVK1_CAPCH) AT5G07670 Solyc03g093320.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0U1ZJJ5_9SOLN) Solyc03g093330.4 218 567 816 816 774 785 663 698 915 407 430 532 656 763 724 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A2R6PLW3_ACTCH) AT5G61480 Solyc03g150141.1 23 17 32 29 25 19 26 30 15 6 15 9 20 9 14 UPF0725 protein (AHRD V3.3 *-* XP_004235347.1) Solyc03g093340.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Uncharacterized conserved protein (UCP012943) (AHRD V3.3 *** AT4G25170.1) AT4G25170 Solyc03g093343.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g093347.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g093350.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 KH_1 domain-containing protein/RRM_1 domain-containing protein (AHRD V3.3 *** A0A1Q3D9P8_CEPFO) AT5G51300 Solyc03g093360.3 159 1080 1797 1237 2384 2523 2474 2135 1420 733 2054 1388 964 1053 1607 PLAT/LH2 domain (AHRD V3.3 *** A0A200QDT2_9MAGN) Solyc03g093370.2 0 5 2 0 0 0 5 1 1 0 10 9 0 1 0 protein DYAD (AHRD V3.3 *** A0A2I4E8U8_9ROSI) AT5G51330 Solyc03g093380.2 53 92 117 139 76 134 98 85 126 71 76 130 102 103 111 Protein kinase family protein (AHRD V3.3 *** A0A1P8AW67_ARATH) AT2G19210 Solyc03g093390.4 0 0 0 1 0 0 0 0 0 3 1 1 0 0 157 beta expansin precursor 2 Solyc03g093400.2 538 397 222 287 149 189 157 168 269 334 308 191 442 319 432 Sugar transporter protein 15 AT5G61520 Solyc03g093410.3 28 5 17 12 0 3 9 0 16 17 37 24 21 23 19 Sugar transporter protein 16 AT5G61520 Solyc03g093430.3 489 330 321 386 349 331 401 389 400 350 375 345 293 332 582 Small G protein family protein / RhoGAP family protein (AHRD V3.3 *** A0A2U1Q0F6_ARTAN) AT5G61530 Solyc03g093440.4 269 234 246 205 267 194 234 149 168 178 214 238 190 229 308 N-(Beta-N-acetylglucosaminyl)-L-asparaginase (AHRD V3.3 *** A0A166SVP4_9PEZI) AT5G61540 Solyc03g093450.3 412 368 395 264 134 97 139 138 297 434 289 244 615 358 388 Protein kinase domain (AHRD V3.3 *** A0A200Q2H7_9MAGN) AT4G25160 Solyc03g093460.3 166 191 321 168 172 183 216 192 189 156 278 177 158 201 291 Protein kinase family protein (AHRD V3.3 *** S8C142_9LAMI) AT5G07620 Solyc03g093470.3 81 123 143 161 134 218 148 166 219 181 191 170 107 100 158 LEAPSAA2 L.esculentum APS-AA2 AT4G25150 Solyc03g093480.3 3888 3286 2539 2481 1609 1795 1971 1570 1999 1899 1935 1852 2956 3253 3185 ARM repeat superfamily protein (AHRD V3.3 *** AT3G06530.5) AT3G06530 Solyc03g093490.3 83 242 227 171 357 233 246 347 274 168 125 264 225 209 128 WD40 repeat (AHRD V3.3 *** A0A200Q150_9MAGN) AT5G07590 Solyc03g093500.3 176 254 413 436 456 559 538 426 252 212 316 321 326 360 306 WD40 repeat-containing protein (AHRD V3.3 *** A0A2U1MW60_ARTAN) Solyc03g093510.2 252 374 454 465 474 454 458 527 522 433 526 398 395 509 432 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NKR4_ARTAN) AT5G51180 Solyc03g093520.3 574 367 434 317 253 310 318 292 359 400 476 254 564 423 428 ATP-dependent 6-phosphofructokinase (AHRD V3.3 *** A0A2G2ZX77_CAPAN) AT5G61580 Solyc03g093540.1 520 295 83 57 0 0 1 0 2 8 71 37 74 130 161 Ethylene-responsive transcription factor 5 (AHRD V3.3 *** ERF5_TOBAC) AT5G51190 Solyc03g093550.1 1066 604 785 153 7 6 1 3 51 40 1082 243 511 299 953 Ethylene-responsive transcription factor 5 (AHRD V3.3 *** A0A2G3CVP7_CAPCH) AT5G51190 Solyc03g093560.1 3455 1302 1697 428 19 22 6 18 159 332 2476 719 664 697 1504 ethylene response factor C.6 AT5G51190 Solyc03g093610.1 91 154 735 94 95 90 92 99 313 220 1242 101 159 159 281 ethylene response factor A.2 AT4G17500 Solyc03g093613.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3MU56_TRIPR) Solyc03g093617.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sec-independent protein translocase protein TATA, chloroplastic (AHRD V3.3 *-* A0A1U8DTP2_CAPAN) Solyc03g093620.1 0 36 53 17 43 62 54 71 26 13 46 57 8 46 11 Sulfotransferase (AHRD V3.3 *** A0A2I4HG22_9ROSI) Solyc03g150142.1 36 34 98 36 13 57 36 31 28 31 43 31 40 71 106 Unknown protein Solyc03g093630.3 22 37 6 9 13 9 10 29 18 12 23 20 26 17 28 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0X046_9ASPA) Solyc03g093640.4 2037 1544 1329 1501 1193 1570 1526 1445 1491 1550 1359 1539 1499 1519 1542 embryonic flower 2 AT5G51230 Solyc03g093645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc03g093650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter (AHRD V3.3 *** A0A200QPV1_9MAGN) Solyc03g093680.4 661 809 993 1060 1257 1268 1089 960 625 746 779 895 847 786 769 Protein mago nashi-like protein (AHRD V3.3 *** A0A1U8FJA6_CAPAN) AT1G02140 Solyc03g093690.3 1606 1448 1144 1277 1456 1217 1210 1574 1508 1952 1248 1288 1304 1246 1002 Peptide methionine sulfoxide reductase (AHRD V3.3 *** A0A2G2X4W4_CAPBA) AT4G25130 Solyc03g093700.3 130 181 102 121 135 155 98 132 154 132 183 146 116 174 85 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *** A0A1U8G968_CAPAN) Solyc03g093710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *** A0A1U8GIG3_CAPAN) Solyc03g093720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *-* A0A1U8G968_CAPAN) Solyc03g093730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *-* A0A1U8GIG3_CAPAN) Solyc03g093740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *-* A0A1U8G968_CAPAN) Solyc03g093750.3 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 Beta-galactosidase (AHRD V3.3 *-* A0A2G2Y8M8_CAPAN) Solyc03g093760.1 6 8 4 12 7 5 2 13 10 4 0 10 8 7 5 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *** A0A1U8G968_CAPAN) Solyc03g093770.1 1 0 0 0 2 3 0 2 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *-* A0A1U8GIG3_CAPAN) Solyc03g093773.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc03g093777.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc03g093790.3 12 64 14 26 60 63 46 16 63 89 63 46 35 33 186 cyclinU4_2 Solyc03g093800.1 235 72 613 336 226 179 176 123 445 211 564 395 144 504 1801 glycine-rich cell wall structural protein 2 (AHRD V3.3 *-* XP_004235193.1) Solyc03g093810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g093820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g093830.3 689 439 535 513 444 476 460 482 514 518 507 531 477 438 607 Chaperone protein dnaJ-like (AHRD V3.3 *** Q6H3Y3_ORYSJ) AT5G61670 Solyc03g093840.3 173 153 237 233 238 288 245 178 114 121 197 191 147 210 113 ATP-dependent DNA helicase SRS2-like protein (AHRD V3.3 *-* A0A2G2X4T1_CAPBA) Solyc03g093850.2 289 321 189 249 354 377 344 466 371 251 255 365 269 386 131 ATP-dependent DNA helicase SRS2-like protein (AHRD V3.3 *** A0A2G2X4T1_CAPBA) AT4G25120 Solyc03g093870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein ZAT7 (AHRD V3.3 *-* A0A2G3ADL5_CAPAN) Solyc03g093880.3 1770 1307 1017 974 1090 944 807 744 795 1193 1003 933 1151 1030 1038 U6 snRNA phosphodiesterase (AHRD V3.3 *** A0A2G2YI60_CAPAN) AT5G51170 Solyc03g093890.3 252 136 137 30 1 0 2 1 24 224 113 8 887 410 114 R2R3MYB transcription factor 52 Solyc03g093920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g093930.4 0 9 0 0 0 0 0 0 0 0 0 0 1 6 0 MYB transcription factor (AHRD V3.3 *** Q2LME3_MALDO) Solyc03g093935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc03g093940.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 51 Solyc03g093970.3 475 841 705 597 819 731 786 788 786 522 491 577 958 915 648 Signal recognition particle subunit SRP68 (AHRD V3.3 *** A0A2G2X690_CAPBA) AT5G61970 Solyc03g093980.2 0 0 0 1 7 1 6 8 5 3 1 8 3 0 1 transmembrane protein (AHRD V3.3 --* AT3G06600.3) Solyc03g093990.4 1231 886 890 1157 1034 1217 1254 1106 802 997 1015 957 805 911 872 Transmembrane protein 135 (AHRD V3.3 *** A0A200RAV7_9MAGN) AT5G51150 Solyc03g094000.3 5 3 0 0 1 13 3 4 4 1 1 14 8 3 7 Chlorophyll A-B binding protein (AHRD V3.3 *** A0A2U1NTI1_ARTAN) Solyc03g094010.3 7 35 47 45 124 98 113 150 88 33 39 71 41 41 36 Glutamate dehydrogenase (AHRD V3.3 *** A0A1U8GQ51_CAPAN) AT5G07440 Solyc03g094020.3 0 10 1 11 0 6 1 6 2 7 18 10 0 2 10 Alpha-glucosidase-like protein (AHRD V3.3 *** A0A2K3NWB8_TRIPR) Solyc03g094030.4 948 973 1248 1187 1220 1033 1016 1168 1042 961 1024 1156 1042 1024 1066 Mediator of RNA polymerase II transcription subunit 31 (AHRD V3.3 *** A0A0K9R349_SPIOL) AT5G19910 Solyc03g094040.4 91 55 94 60 35 91 55 41 44 53 61 51 49 60 184 Polyadenylate-binding protein 1 (AHRD V3.3 *** A0A2U1NYE9_ARTAN) Solyc03g094050.4 29 20 5 12 10 8 12 15 12 12 2 6 7 11 7 Unknown protein Solyc03g094060.4 85 48 40 45 33 53 55 47 35 59 65 48 19 58 66 Polyadenylate-binding protein 1 (AHRD V3.3 *-* A0A2U1NYG6_ARTAN) Solyc03g094070.4 218 119 64 130 111 67 103 73 82 133 77 104 81 116 42 Mediator of RNA polymerase II transcription subunit 31-like protein (AHRD V3.3 *-* A0A2K3PMB6_TRIPR) Solyc03g094080.4 953 900 1259 1119 816 1230 1067 694 741 749 1074 761 1237 1143 1223 Polyadenylate-binding protein 1 (AHRD V3.3 *-* A0A2U1NYE9_ARTAN) Solyc03g094090.3 619 639 533 461 465 476 387 562 586 499 388 417 829 679 655 Polyadenylate-binding protein (AHRD V3.3 *-* G5DWR4_SILLA) Solyc03g094100.1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200QRC8_9MAGN) Solyc03g094110.4 0 3 0 1 0 0 0 0 0 0 0 0 2 0 0 Nucleotide-diphospho-sugar transferase (AHRD V3.3 *** A0A2U1NTH5_ARTAN) AT1G28710 Solyc03g094120.3 9 1 0 1 0 0 0 0 0 1 4 4 0 7 4 Nucleotide-diphospho-sugar transferase (AHRD V3.3 *** A0A2U1NTH5_ARTAN) AT1G28710 Solyc03g094125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc03g094130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic (AHRD V3.3 *-* A0A2G3D868_CAPCH) Solyc03g094140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic (AHRD V3.3 *-* A0A2G3D868_CAPCH) Solyc03g094150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic (AHRD V3.3 *-* A0A2G3D868_CAPCH) Solyc03g094155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g094160.3 497 402 473 454 169 154 154 206 304 982 436 284 541 364 384 metacaspase-1-like (AHRD V3.3 *** A0A1U7W9C1_NICSY),Pfam:PF00656 Solyc03g094170.3 0 2 0 0 2 6 0 3 2 5 0 2 0 3 0 Sugar transporter protein 17 Solyc03g094173.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 7 Zinc finger, GRF-type (AHRD V3.3 *** A0A2U1PHW6_ARTAN) Solyc03g094175.1 0 0 3 0 2 1 0 1 0 3 0 0 0 3 1 Transcriptional coactivator/pterin dehydratase (AHRD V3.3 *** A0A200Q8U8_9MAGN) AT5G51110 Solyc03g094177.1 0 1 0 1 1 0 2 0 0 2 0 1 0 2 0 Transcriptional coactivator/pterin dehydratase (AHRD V3.3 *** A0A200Q8U8_9MAGN) AT5G51110 Solyc03g095180.3 137 456 338 300 494 357 334 525 413 259 268 346 458 450 318 Superoxide dismutase (AHRD V3.3 *** S8E1B9_9LAMI) AT5G51100 Solyc03g095190.4 2406 2591 2861 3265 3187 3072 3304 2644 2243 2585 2604 2398 3181 2601 2698 ATP synthase subunit delta', mitochondrial (AHRD V3.3 *** A0A2G2WIK8_CAPBA) AT5G47030 Solyc03g095200.1 155 181 107 169 123 112 145 149 132 158 100 122 140 139 93 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q2K1_9MAGN) AT1G02060 Solyc03g095210.2 0 0 9 0 0 0 6 2 1 2 0 0 0 0 0 WD40 repeat (AHRD V3.3 *** A0A200QQH4_9MAGN) Solyc03g095220.3 1826 2229 2333 1898 1979 2134 2099 1857 1644 1567 1874 1927 2553 2812 2062 Translocase of chloroplast (AHRD V3.3 *** A0A1U8G0U4_CAPAN) AT5G05000 Solyc03g095230.2 802 521 526 622 524 475 566 475 409 499 596 471 411 597 740 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* A0A2U1M751_ARTAN) AT1G77230 Solyc03g095250.3 460 1003 1350 1265 1387 1617 1630 1618 1468 974 1170 1265 1066 1137 1239 COP1-Interacting protein-related (AHRD V3.3 *** A0A2R4QNN9_9POAL) Solyc03g095260.3 2028 2043 1559 1456 1758 1752 1713 1930 1558 1642 1284 1727 1731 1782 1540 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PRC0_ARTAN) AT3G54190 Solyc03g095270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger protein 4-like (AHRD V3.3 --* XP_020212794.1) Solyc03g095290.3 418 358 341 352 386 349 382 382 371 382 354 285 321 351 402 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A1I9LRX3_ARATH) AT3G10840 Solyc03g095300.4 854 1052 1341 1922 1523 1708 1876 1416 1084 1047 1454 1259 1163 1361 1486 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2K3P5L3_TRIPR) Solyc03g095310.3 391 133 430 541 100 82 75 67 160 453 396 265 115 275 370 Cytochrome P450 (AHRD V3.3 *** A0A2U1PRC1_ARTAN) AT5G24910 Solyc03g095320.1 75 51 51 99 65 79 58 47 48 65 72 93 35 64 41 Quinone oxidoreductase-like protein (AHRD V3.3 *-* A0A2I0WF16_9ASPA) Solyc03g095330.3 84 49 39 26 22 42 44 40 40 37 33 44 53 55 79 Unknown protein Solyc03g095350.3 31 13 25 9 3 10 22 6 10 8 31 4 11 16 23 Quinone oxidoreductase-like protein 2-like protein (AHRD V3.3 *-* A0A1J3JSX1_NOCCA) Solyc03g095360.3 4976 3790 2944 2952 2696 2897 2678 3111 2751 3540 2841 3060 3780 3436 3388 Quinone oxidoreductase-like protein (AHRD V3.3 *** A0A2I0WF16_9ASPA) AT3G56460 Solyc03g095370.3 85 114 93 144 107 128 175 77 84 89 264 62 48 84 96 Unknown protein Solyc03g095375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc03g095380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* I6N947_DATST) Solyc03g150143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) Solyc03g150144.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR (AHRD V3.3 *-* A0A2U1P8Z2_ARTAN) Solyc03g095410.3 2572 2416 1742 1729 1690 1544 1632 1867 2135 1973 1482 1579 2511 2526 1859 Exocyst complex component SEC10 (AHRD V3.3 *** A0A1U8FT20_CAPAN) AT5G12370 Solyc03g095420.3 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *-* A0A061DXG0_THECC) Solyc03g095425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FT-interacting protein 1-like (AHRD V3.3 *-* XP_020180131.1) Solyc03g095450.3 264 197 287 352 176 277 310 153 180 244 344 206 220 250 421 RING/U-box superfamily protein (AHRD V3.3 *** Q8L610_ARATH) Solyc03g095470.3 774 1101 927 1030 1089 1035 1064 1187 804 958 816 993 1120 1112 929 Import inner membrane translocase subunit (AHRD V3.3 *** Q9SHB0_ARATH) AT2G40800 Solyc03g095490.3 711 1921 1694 1971 2274 2206 2116 2551 2154 1871 1806 1375 1915 1585 1608 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A061H0G0_THECC) Solyc03g095500.3 17 21 43 28 19 23 13 12 13 6 43 1 9 18 63 Thioredoxin (AHRD V3.3 *** A0A2G2X4X1_CAPBA) Solyc03g095510.3 222 153 139 139 91 120 107 92 130 153 156 129 178 176 167 Serine/threonine-protein kinase AtPK1/AtPK6 (AHRD V3.3 *** A0A2G2X4V7_CAPBA) Solyc03g095515.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095533.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095537.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095550.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methyl esterase 17 (AHRD V3.3 *** A0A2U1M7F1_ARTAN) AT3G10870 Solyc03g095600.1 298 1101 856 913 1734 1452 1470 1754 1226 639 1063 1173 627 956 426 KIP1-like (AHRD V3.3 *-* A0A200R3P8_9MAGN) AT5G05180 Solyc03g095610.4 1207 631 808 568 377 452 410 324 484 511 609 318 711 568 666 DUF3133 domain-containing protein (AHRD V3.3 *** A0A1Q3BII0_CEPFO) AT5G05190 Solyc03g095620.4 698 429 256 367 395 441 398 374 405 488 333 425 309 329 304 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1QJW2_ARTAN) AT5G05200 Solyc03g095650.3 296 132 66 138 0 0 0 0 29 9 5 0 89 290 671 MLO-like protein (AHRD V3.3 *** K4BIY8_SOLLC) Solyc03g095660.3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095680.2 432 391 364 337 412 343 366 483 437 374 262 334 350 449 277 SNF2-related (AHRD V3.3 *** A0A200R3L2_9MAGN) AT2G40770 Solyc03g095690.3 313 245 292 295 154 269 250 188 176 184 250 181 276 226 381 SNF2-related (AHRD V3.3 *-* A0A200R3L2_9MAGN) Solyc03g095700.1 0 4 0 1 10 2 8 1 0 4 0 2 1 1 1 hypothetical protein (AHRD V3.3 *-* AT5G05220.1) AT5G05220 Solyc03g095710.4 178 177 124 126 116 114 118 88 137 159 130 141 172 177 168 Alpha-amylase (AHRD V3.3 *** K4BIZ4_SOLLC) AT4G25000 Solyc03g095720.3 780 1121 883 792 1056 1015 989 1238 1066 842 735 983 1421 1261 997 Transcription elongation factor TFIIS (AHRD V3.3 *** A0A2G2X4U9_CAPBA) AT2G38560 Solyc03g095730.4 369 688 815 888 846 1051 923 805 537 499 886 545 1012 866 883 Ubiquinol-cytochrome c reductase complex 6.7 kDa protein (AHRD V3.3 *** A0A2G2ZWQ4_CAPAN) Solyc03g095750.2 9 2 2 6 0 2 0 1 13 2 4 10 19 20 14 Chlorophyllide a oxygenase (AHRD V3.3 *-* F8SPG4_CAMSI) Solyc03g095760.3 520 750 695 689 684 597 642 673 571 501 448 581 729 754 568 Rhodanese-like domain-containing protein 7 (AHRD V3.3 *** A0A2G3CU78_CAPCH) AT2G40760 Solyc03g095770.3 5071 1851 4986 1230 327 292 473 237 1405 2669 6490 853 4742 2149 2161 WRKY transcription factor 80 AT3G56400 Solyc03g095775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) Solyc03g095780.3 173 225 589 93 424 381 293 479 542 223 640 228 187 146 90 abscisic acid receptor PYL4-like (AHRD V3.3 *** A0A2I4EQL0_9ROSI) Solyc03g150145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095785.1 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 Unknown protein Solyc03g095787.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095810.3 1 8 3 1 0 2 0 2 6 3 12 11 7 2 0 Protein trichome birefringence-like 32 (AHRD V3.3 *** A0A2G3C6N9_CAPCH) Solyc03g095820.4 64 55 75 121 48 87 59 43 206 109 170 81 68 83 153 Plant cadmium resistance 2 (AHRD V3.3 *** A0A0K9PMY3_ZOSMR) Solyc03g095830.3 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 Unknown protein AT4G00310 Solyc03g095840.3 1507 2848 2071 1893 2743 2448 2501 2742 2067 1514 1536 1905 3423 2517 1908 Eukaryotic translation initiation factor 2 subunit alpha (AHRD V3.3 *** A0A2G2W0V8_CAPBA) AT2G40290 Solyc03g095845.1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 Unknown protein Solyc03g095850.1 371 323 404 605 393 407 426 464 429 550 406 622 376 330 259 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (AHRD V3.3 *** A0A200PX65_9MAGN) AT5G05480 Solyc03g095860.3 223 357 332 741 699 575 656 848 499 558 363 481 204 306 458 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1NC91_ARTAN) Solyc03g095870.3 67 34 11 36 18 17 11 22 5 11 3 5 16 23 16 Eukaryotic translation initiation factor 2 subunit alpha (AHRD V3.3 *-* A0A2G2ZUF6_CAPAN) Solyc03g095880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g095900.4 0 0 0 0 13 3 0 0 0 0 0 0 0 0 0 E8 protein homolog AT1G04350 Solyc03g095903.1 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1QA13_ARTAN) Solyc03g095907.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1L2L8_ARTAN) Solyc03g095940.1 326 561 467 662 670 671 605 554 369 369 386 472 494 331 540 LOB domain-containing protein 21 (AHRD V3.3 *** A0A2G2ZWR8_CAPAN) AT3G11090 Solyc03g095950.3 52 67 92 83 64 74 95 48 45 53 63 58 56 59 66 Unknown protein Solyc03g095960.1 342 379 307 383 402 435 397 460 397 323 242 402 311 415 224 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PX63_9MAGN) AT2G40240 Solyc03g095970.3 58 460 491 668 849 836 966 827 759 458 568 1179 414 792 379 Short-chain dehydrogenase reductase 4 (AHRD V3.3 *** A0A2G3DIE1_CAPCH),Pfam:PF13561 AT2G47140 Solyc03g095973.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor ABI4 (AHRD V3.3 *-* A0A2G3CUC7_CAPCH) AT2G40220 Solyc03g095977.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor ABI4 (AHRD V3.3 *-* A0A2G3CUC7_CAPCH) AT2G40220 Solyc03g095980.3 37 28 65 80 85 54 55 32 104 63 48 53 73 74 49 bHLH transcription factor 021 AT2G40200 Solyc03g095990.1 448 331 233 306 294 266 316 210 297 202 290 184 311 323 471 transmembrane protein (AHRD V3.3 *-* AT3G56010.1) AT3G56010 Solyc03g096000.3 1876 3238 2447 2506 3118 2942 2971 4029 3771 2955 2033 3114 3109 3198 2422 Clathrin heavy chain (AHRD V3.3 *** A0A2G3CUD9_CAPCH) AT3G11130 Solyc03g150146.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VXM7_9ASPA) ATMG00810 Solyc03g096005.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1QNY7_ARTAN) Solyc03g096007.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CPS6_CEPFO) Solyc03g096030.3 10 48 14 26 21 35 47 37 43 53 48 29 4 19 56 Protein trichome birefringence-like 28 (AHRD V3.3 *** A0A1J3CSC5_NOCCA) AT3G55990 Solyc03g096040.3 0 0 0 0 9 0 0 3 2 0 0 0 0 1 1 1-Cys peroxiredoxin (AHRD V3.3 *** A0A2I4FQD8_9ROSI) AT1G48130 Solyc03g096050.3 150 117 42 21 46 19 23 20 26 65 2 26 60 56 61 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4J670_ARATH) AT5G05600 Solyc03g150147.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Unknown protein Solyc03g096070.3 73 101 130 96 138 163 157 211 95 63 89 70 161 109 49 Phosphoinositide phospholipase C (AHRD V3.3 *** A0A2G2X4X9_CAPBA) Solyc03g096080.4 1508 823 1135 1005 1191 912 951 874 740 1177 1257 846 740 769 1296 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) AT2G40110 Solyc03g096090.4 1577 1265 1154 1037 1223 1173 1047 1266 1003 1420 959 1336 1037 1211 871 flocculation protein FLO11-like (AHRD V3.3 *-* A0A2I4ER08_9ROSI) AT2G40070 Solyc03g096100.2 34 39 14 61 0 2 3 1 46 52 44 12 26 19 81 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) Solyc03g096110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) Solyc03g096120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) Solyc03g096130.2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) Solyc03g096140.2 6 3 2 27 2 0 2 1 0 11 31 11 6 17 27 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) Solyc03g096150.3 0 0 0 0 0 0 0 0 0 0 4 0 0 0 30 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) Solyc03g096160.3 44 16 22 44 26 0 16 0 16 4 55 32 47 35 203 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) Solyc03g096180.4 4 3 6 0 0 0 0 0 4 6 0 0 3 11 0 flocculation protein FLO11-like (AHRD V3.3 *-* A0A2I4ER08_9ROSI) Solyc03g096190.2 9 21 37 6 20 7 5 5 21 12 20 7 54 21 8 Receptor-kinase, putative (AHRD V3.3 *** B9SUC9_RICCO) Solyc03g096195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc03g096200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2K3PHM3_TRIPR) Solyc03g096220.3 412 178 291 281 192 283 210 142 187 190 338 228 233 279 347 tRNA-splicing endonuclease subunit (AHRD V3.3 *-* F4J8D6_ARATH) Solyc03g096225.1 4 8 27 3 1 1 0 0 6 8 13 11 1 14 1 Translocation protein Sec62 (AHRD V3.3 *-* A0A200QIN6_9MAGN) Solyc03g096250.3 191 53 200 273 479 357 393 408 58 193 78 29 70 52 52 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) AT2G40110 Solyc03g096260.3 142 121 109 98 53 65 88 22 128 106 199 102 91 152 316 Protein yippee-like (AHRD V3.3 *** A0A1U8GAE4_CAPAN) AT2G40110 Solyc03g096280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g096290.3 734 2265 2561 3204 1222 1388 1162 947 18252 18402 10401 5073 4202 1538 6497 plasma membrane intrinsic protein 1.7 Solyc03g096300.3 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 WUSCHEL-related homeobox protein (AHRD V3.3 *** A0A097I3L1_ROSCN) AT3G11260 Solyc03g096303.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 DNA topoisomerase (AHRD V3.3 *-* A0A1J3C7F3_NOCCA) AT2G07505 Solyc03g096305.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic (AHRD V3.3 *-* A0A2G2W0B0_CAPBA) Solyc03g096307.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc03g096350.3 33 119 109 90 48 54 31 33 113 61 144 34 131 91 87 Transcription factor DIVARICATA (AHRD V3.3 *** A0A1U8G0H1_CAPAN) AT3G11280 Solyc03g096355.1 2 3 3 2 1 3 2 0 3 1 1 2 0 5 0 Unknown protein Solyc03g096360.4 3433 7364 7060 5353 7438 7742 7225 7418 4807 3792 5563 5319 9401 8002 6392 60S ribosomal protein L35a-3 (AHRD V3.3 *** A0A2G3CUB7_CAPCH) AT1G74270 Solyc03g096370.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 O-fucosyltransferase family protein (AHRD V3.3 *** A0A061FTF8_THECC) Solyc03g096380.3 278 239 343 456 130 194 179 159 357 420 485 165 118 313 346 proline transporter 2 AT2G39890 Solyc03g096385.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBN2_2 domain-containing protein (AHRD V3.3 *** A0A1Q3AQU5_CEPFO),Pfam:PF14223 AT5G53670 Solyc03g096390.3 606 425 447 383 175 208 150 219 301 433 328 232 455 478 283 proline transporter 1 AT2G39890 Solyc03g096410.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc03g096420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g096430.1 2 1 16 9 0 2 4 2 2 1 4 5 16 5 7 Unknown protein Solyc03g096433.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CPS6_CEPFO) Solyc03g096437.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) Solyc03g096450.3 111 64 60 74 54 40 32 38 95 104 103 56 74 51 100 protein PIR isoform X1 (AHRD V3.3 --* XP_024989927.1) Solyc03g096460.4 79 153 379 267 482 466 391 419 374 241 436 393 210 186 197 wound/stress protein AY568721 AT4G39730 Solyc03g096500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g096520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g096530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g096540.3 14 10 4 2 0 0 0 0 0 2 0 0 0 20 8 PLAT/LH2 domain-containing protein (AHRD V3.3 *** A0A2U1NEA8_ARTAN) AT4G39730 Solyc03g096545.1 183 29 23 11 0 0 0 1 1 38 72 0 0 82 18 PLAT/LH2 domain-containing protein (AHRD V3.3 *** A0A2U1NEA8_ARTAN) Solyc03g096600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g096605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc03g096610.2 53 32 13 33 19 43 29 32 36 36 7 50 38 37 19 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2YMG9_CAPAN) AT1G33350 Solyc03g096620.3 75 54 30 42 32 38 30 33 49 50 44 66 47 59 56 F-box/LRR-repeat protein (AHRD V3.3 *** A0A1U8G7I8_CAPAN) Solyc03g096630.1 6 6 0 7 0 0 0 0 0 1 0 0 6 5 2 Ethylene insensitive 3 protein (AHRD V3.3 *-* V9TIT2_CUCPE) AT5G10120 Solyc03g096640.4 796 508 717 565 439 456 579 416 462 563 653 480 568 538 650 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IKL5_ARATH),Pfam:PF13561 AT5G06060 Solyc03g096650.2 5 5 20 9 13 14 5 21 8 9 9 8 0 13 0 Tropinone reductase-like protein (AHRD V3.3 *-* A0A2K3NES8_TRIPR) AT2G29170 Solyc03g096660.2 8 5 14 23 4 37 23 14 23 16 27 29 5 13 7 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A1P8AYM6_ARATH),Pfam:PF13561 Solyc03g096670.3 3805 1441 1168 1433 705 911 756 813 1079 1756 1489 1563 1633 2389 4841 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1LBV4_ARTAN) AT3G11410 Solyc03g096680.2 15 17 8 26 4 5 0 9 2 7 8 7 7 6 12 Eukaryotic translation initiation factor 3 subunit G (AHRD V3.3 *** A0A2I4FFZ1_9ROSI) AT3G11400 Solyc03g096700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 L-ascorbate peroxidase T, chloroplastic (AHRD V3.3 *-* A0A2G3B1R4_CAPCH) Solyc03g096705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc03g096710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g096720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Unknown protein Solyc03g096730.3 1019 1563 1418 1899 1597 1491 1532 1555 2246 2595 2123 1696 1721 1245 1944 pollen-specific kinase partner protein AT2G39770 Solyc03g096740.4 198 125 146 138 91 99 77 81 77 115 94 110 124 145 106 Unknown protein Solyc03g096750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3JJ83_COCAP) Solyc03g096760.1 15 33 45 20 45 45 43 35 26 11 38 17 45 5 9 Protein RESPONSE TO LOW SULFUR 2 (AHRD V3.3 *-* LSU2_ARATH) AT3G49570 Solyc03g096770.1 21 16 34 43 23 34 28 18 18 34 49 44 34 10 26 Protein RESPONSE TO LOW SULFUR 2 (AHRD V3.3 *-* LSU2_ARATH) AT3G49570 Solyc03g096780.1 267 237 952 583 239 226 272 168 560 440 757 429 411 260 577 Protein RESPONSE TO LOW SULFUR 2 (AHRD V3.3 *-* LSU2_ARATH) AT3G49570 Solyc03g096790.3 801 731 675 831 779 746 734 1013 763 968 610 895 764 785 685 Autophagy-related protein 13 (AHRD V3.3 *** A0A200PMJ6_9MAGN) AT3G49590 Solyc03g096800.4 3506 3478 3603 3887 3151 3838 3525 3351 4593 4769 3707 5384 3916 4707 2190 membrane protein of ER body-like protein (AHRD V3.3 *-* A0A2I4FK95_9ROSI) AT4G27870 Solyc03g096810.3 1681 1553 1191 1125 1252 1213 1246 1250 1172 1099 878 1028 1399 1299 1184 TMPIT-like protein (AHRD V3.3 *** A0A2U1MUX7_ARTAN) AT1G33230 Solyc03g096820.4 536 509 572 510 507 554 511 509 614 610 541 535 438 475 548 Aluminum-activated malate transporter-like (AHRD V3.3 *** K4BJA0_SOLLC) AT1G25480 Solyc03g096830.4 230 226 146 178 201 197 168 162 212 182 144 207 117 246 143 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2X7V2_CAPBA) AT3G18110 Solyc03g096840.4 1799 1072 2427 1805 1546 1385 1343 1092 1891 1845 4032 2018 993 1504 4517 hypothetical protein (AHRD V3.3 *** AT5G17165.1) AT5G17165 Solyc03g096850.4 564 697 532 545 898 823 774 1040 674 715 679 716 414 414 544 Rubredoxin family protein (AHRD V3.3 *** Q9FFJ2_ARATH) AT5G17170 Solyc03g096860.3 1040 771 779 590 726 611 573 591 567 683 633 649 729 657 550 DUF1218 domain-containing protein (AHRD V3.3 *** A0A1Q3D3G2_CEPFO) AT5G17210 Solyc03g096870.3 307 1377 1621 2472 3029 3666 4026 2425 1239 747 1729 1643 278 1051 1215 cell division cycle 20.2, cofactor of APC complex-like (AHRD V3.3 *** A0A2I4FBA0_9ROSI) AT4G33270 Solyc03g096880.4 874 615 481 439 397 413 339 415 444 634 513 447 538 513 387 Tudor/PWWP/MBT superfamily protein (AHRD V3.3 *** A0A1I9LQC0_ARATH) AT3G03140 Solyc03g096890.3 215 530 574 688 1108 1244 1211 1365 608 556 659 1001 156 449 240 Serine/threonine-protein kinase TIO (AHRD V3.3 *** A0A1U8FYB3_CAPAN) AT1G50240 Solyc03g096900.4 890 470 310 437 459 460 506 394 508 505 416 326 379 305 413 GTP pyrophosphokinase (AHRD V3.3 *** A0A2K3NQK0_TRIPR) Solyc03g096910.3 591 430 583 479 540 532 574 499 407 476 501 417 622 509 596 ADP-ribosylation factor (AHRD V3.3 *** Q5FYS3_DAUCA) AT3G03120 Solyc03g096920.3 3843 5167 4259 4163 4690 4461 4709 5485 4268 3915 3075 4437 5068 5040 3667 Exportin-1 (AHRD V3.3 *** D1MAF2_SOLLC) AT5G17020 Solyc03g096930.4 1143 1234 952 904 1170 1132 1133 1224 1343 1124 1058 1157 1432 1303 1048 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8ASM3_ARATH) AT3G16090 Solyc03g096940.4 608 911 1483 1145 1356 1271 1248 1093 1047 786 1217 966 1145 1115 1318 Unknown protein Solyc03g096950.4 765 655 618 654 652 668 650 708 794 835 649 812 642 728 681 Vacuolar glucose transporter 2 AT5G17010 Solyc03g096960.3 1010 1432 1047 844 1088 976 966 998 839 612 871 842 1971 1487 1165 hypothetical protein (AHRD V3.3 *-* AT1G08580.1) AT1G08580 Solyc03g096980.1 1040 1402 1057 1326 1754 1827 1679 1770 1559 1321 1171 1272 1368 1108 1178 Cytochrome P450 (AHRD V3.3 *** A0A200R6R8_9MAGN) AT1G64950 Solyc03g096990.4 860 845 883 875 777 802 742 886 1003 897 808 748 1231 922 1230 Cytochrome P450 (AHRD V3.3 *** A0A200R6R8_9MAGN) AT1G64950 Solyc03g097000.3 429 424 387 416 357 328 389 386 359 382 443 387 327 476 480 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CXB3_CAPCH) AT5G27270 Solyc03g097010.3 358 546 709 684 710 821 879 682 524 472 724 775 657 691 732 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (AHRD V3.3 *** A0A2G3CXC6_CAPCH) AT3G03070 Solyc03g097020.4 358 840 650 350 375 373 391 404 513 197 363 380 1137 821 529 ATPase family AAA domain-containing protein 3-like (AHRD V3.3 *** A0A2I4ECM7_9ROSI) AT3G03060 Solyc03g097030.3 269 259 131 225 93 101 99 78 287 186 300 164 235 247 224 4-coumarate:CoA ligase (AHRD V3.3 *** Q42880_LITER) AT1G65060 Solyc03g097040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 low-molecular-weight cysteine-rich 83 (AHRD V3.3 -** AT5G54225.1) Solyc03g097050.3 155 346 990 409 378 492 473 453 485 517 641 380 298 306 355 Cellulose synthase (AHRD V3.3 *** A0A2U1M9E5_ARTAN) AT3G03050 Solyc03g097060.4 723 862 948 1049 1263 1139 1184 1158 697 928 764 808 849 870 901 Exostosin-like (AHRD V3.3 *** A0A200QTM8_9MAGN) AT5G16890 Solyc03g097070.3 2815 1942 2376 1815 1188 1254 1212 1348 1961 2033 1882 1507 2943 2240 2030 TOM1-like protein 2 (AHRD V3.3 *** A0A2I4ECI5_9ROSI) AT5G16880 Solyc03g097080.4 78 51 44 53 19 26 33 28 33 64 69 28 62 41 54 Cystatin/monellin superfamily protein (AHRD V3.3 *** Q9CAM2_ARATH) AT2G37435 Solyc03g097090.4 2 7 16 25 33 47 48 32 17 3 15 16 4 0 2 Transcription factor jumonji (Jmj) family protein / zinc finger (C5HC2 type) family protein (AHRD V3.3 *** F4KIX0_ARATH) Solyc03g097100.1 0 1 0 0 1 0 2 5 0 0 0 0 4 1 6 Calmodulin (AHRD V3.3 *** B6UHC3_MAIZE) AT3G03000 Solyc03g097110.4 647 526 656 518 397 528 396 391 521 589 551 597 932 715 674 binding partner of ACD11 1 (AHRD V3.3 *** A0A1U8G5Z0_CAPAN) Solyc03g097120.3 1513 756 532 532 572 466 480 461 440 713 427 595 782 815 1039 Heat stress transcription factor A-1 (AHRD V3.3 *** A0A2G3ARP3_CAPCH) Solyc03g097130.3 310 242 264 305 267 229 229 245 246 265 347 225 199 246 394 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1LHG7_ARTAN) AT5G16810 Solyc03g097140.3 661 576 933 914 805 918 866 634 796 857 879 801 637 705 646 Histone acetyltransferase MCC1 (AHRD V3.3 *** A0A2G3CY02_CAPCH) AT3G02980 Solyc03g097150.3 238 136 199 213 153 129 109 109 206 216 216 196 270 174 466 Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** A0A2G2VB14_CAPBA) Solyc03g097160.4 878 962 832 602 568 664 686 714 689 506 594 619 1088 1015 944 WD40 repeat (AHRD V3.3 *** A0A200PXI1_9MAGN) AT5G16750 Solyc03g097170.3 176 308 999 384 330 420 302 223 443 154 1254 248 254 235 428 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1LGD5_ARTAN) AT2G23910 Solyc03g097180.3 728 428 616 351 312 277 259 206 384 375 488 259 516 487 485 plasma protein (AHRD V3.3 *** AT1G65020.1) AT1G65020 Solyc03g097190.3 1772 2517 2284 1761 2213 2415 2272 2405 3707 2089 2442 2148 2612 2433 2470 WEB family protein, chloroplastic (AHRD V3.3 *** A0A2G2VB89_CAPBA) Solyc03g097200.3 448 185 253 306 219 257 227 196 205 270 345 246 189 244 304 carboxypeptidase (AHRD V3.3 *** AT5G38060.1) AT1G65000 Solyc03g097210.3 721 682 642 543 620 605 692 640 663 792 734 660 544 667 583 Carbohydrate kinase-like protein (AHRD V3.3 *** Q8L993_ARATH) AT4G27600 Solyc03g097220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g097230.1 191 287 244 277 91 61 52 73 71 223 311 72 355 139 150 AIG2-like (Avirulence induced gene) family protein (AHRD V3.3 *** Q9FIQ3_ARATH) AT3G02910 Solyc03g097240.3 564 209 233 275 202 274 230 202 237 427 269 243 138 176 196 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G3CXE4_CAPCH) AT5G16650 Solyc03g097250.4 510 620 700 605 720 710 761 695 592 413 493 457 673 653 563 Low-density receptor-like protein (AHRD V3.3 *** Q8H0X5_ARATH) AT3G02900 Solyc03g097260.4 2697 1968 2040 2153 1453 1963 1967 1536 1932 1817 2082 1712 1848 2575 2858 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** F4IYH6_ARATH) AT5G16680 Solyc03g097270.3 5215 2305 4470 2422 1609 1715 1659 1468 2456 4898 3443 1915 3915 2816 3672 cystatin 9 AT3G12490 Solyc03g097280.4 620 817 684 500 675 686 726 655 706 511 520 545 670 820 746 MIF4G-like domain containing protein (AHRD V3.3 *** A0A1Y1HVU3_KLENI) AT5G17930 Solyc03g097290.4 3375 3615 2662 2321 2701 2834 2814 3431 3012 2943 2055 2827 3769 3413 2900 DB199 AT1G50200 Solyc03g097300.4 2857 2461 2105 2419 2310 2212 2051 2636 2273 2482 2406 2444 2452 2439 1964 Mediator of RNA polymerase II transcription subunit-like protein (AHRD V3.3 *** Q9SRQ0_ARATH) AT5G17510 Solyc03g097310.3 541 371 375 488 207 244 251 221 344 353 347 342 440 423 528 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1KN02_ARTAN) AT1G64890 Solyc03g097320.3 29 49 39 33 92 104 66 92 38 31 48 62 35 63 141 RNA polymerase sigma factor sigA (AHRD V3.3 *** A0A2G2VB29_CAPBA) AT1G64860 Solyc03g097330.1 4 34 33 14 113 95 108 62 11 12 39 20 27 28 25 RNA polymerase sigma factor sigA (AHRD V3.3 *-* A0A1U8G7V4_CAPAN) Solyc03g097340.1 1853 1417 1162 1232 1500 1056 1028 1456 1045 2170 1029 1316 1404 1135 1040 WD40 repeat protein (AHRD V3.3 *** Q1JUZ7_IPONI) AT5G24520 Solyc03g097350.4 2579 2726 2432 2654 2641 3143 3391 3004 2882 2658 2618 2609 2338 2722 2625 Protein kinase domain (AHRD V3.3 *** A0A200R6L9_9MAGN) AT5G35980 Solyc03g097360.3 421 691 634 675 695 722 718 720 481 433 416 578 729 623 564 Protein BOLA4, chloroplastic/mitochondrial (AHRD V3.3 *** A0A2G3A0H0_CAPAN) AT5G17560 Solyc03g097370.4 675 756 511 597 821 860 903 998 715 744 308 596 659 482 294 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LV77_ARTAN) AT5G35970 Solyc03g097380.4 2996 2876 2570 2486 6445 7284 6539 5690 3041 1889 3295 2708 2375 1865 2140 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6PUZ2_ACTCH) AT5G63530 Solyc03g097390.3 2 8 14 16 37 32 35 28 11 12 21 22 21 8 4 Acyl-[acyl-carrier-protein] hydrolase (AHRD V3.3 *** A0A2G2VB33_CAPBA) Solyc03g097400.1 167 258 222 190 447 403 358 462 205 249 238 314 202 151 103 Mitotic-spindle organizing protein 1 (AHRD V3.3 *** A0A2G2VB30_CAPBA) AT4G09550 Solyc03g097410.1 2 24 0 4 1 11 3 13 3 5 0 1 0 1 9 Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** A0A2G3CXH1_CAPCH) Solyc03g097420.3 4 24 24 38 16 41 33 24 32 24 8 13 54 37 35 HVA22-like protein (AHRD V3.3 *** A0A2G3A0I0_CAPAN) AT5G50720 Solyc03g097430.1 69 100 93 130 206 233 148 190 105 96 140 104 132 106 114 DUF4408 domain-containing protein (AHRD V3.3 *-* A0A1Q3CQ79_CEPFO) AT5G50610 Solyc03g097440.3 209 59 99 72 3 4 0 3 82 169 95 66 28 79 78 11-beta-hydroxysteroid dehydrogenase 1A (AHRD V3.3 *** A0A2G3A0G7_CAPAN) AT5G50700 Solyc03g097450.4 556 530 476 484 469 428 461 437 488 408 388 408 477 490 429 SWI/SNF complex subunit SWI3A (AHRD V3.3 *** A0A2I4FD18_9ROSI) Solyc03g097460.3 2821 1475 1341 1416 1104 1202 1462 1014 1149 1270 1362 1174 984 1321 1702 Integrator complex subunit (AHRD V3.3 *** A0A1I9LM23_ARATH) AT3G07530 Solyc03g097470.3 268 877 870 927 1005 1183 1108 1228 779 575 676 802 768 872 666 3-oxoacyl-[acyl-carrier-protein] synthase 3 (AHRD V3.3 *** A0A2U1LL37_ARTAN) AT1G62640 Solyc03g097490.4 1475 1480 1373 1126 985 1167 1116 1200 1266 861 1197 1047 1402 1385 1274 DEK (AHRD V3.3 *-* A0A200R412_9MAGN) AT5G63550 Solyc03g097500.3 3 1 14 12 7 10 4 3 1 1 1 6 3 3 0 Transferase (AHRD V3.3 *** A0A200QGG9_9MAGN) AT5G41040 Solyc03g097510.1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 Small auxin up-regulated RNA38 AT5G50760 Solyc03g097520.3 550 816 743 819 846 989 870 1050 846 647 814 860 853 911 682 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (AHRD V3.3 *-* A0A1P8BEQ3_ARATH) AT4G24970 Solyc03g097530.3 91 65 109 130 91 133 89 111 91 67 187 164 56 107 170 protein TAPETUM DETERMINANT 1-like (AHRD V3.3 *** A0A2I4H4K2_9ROSI) AT1G32583 Solyc03g097540.2 2 3 1 1 1 1 5 7 5 4 12 4 3 4 1 Unknown protein Solyc03g097550.3 1516 902 926 1000 649 782 848 689 762 785 950 775 745 911 1076 Pseudouridine synthase (AHRD V3.3 *** A0A2G2X7M1_CAPBA) AT5G51140 Solyc03g097560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVI0_SOLTU) AT3G48740 Solyc03g097570.3 33 35 47 77 24 25 18 13 55 80 74 19 107 81 341 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVH6_SOLTU) AT3G48740 Solyc03g097580.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVH1_SOLTU) AT3G48740 Solyc03g097590.4 246 711 285 472 33 20 19 9 349 471 389 87 420 328 526 Bidirectional sugar transporter SWEET (AHRD V3.3 *** M1D4D4_SOLTU) AT3G48740 Solyc03g097600.3 44 172 162 175 4 1 0 3 43 48 65 3 38 53 93 Bidirectional sugar transporter SWEET (AHRD V3.3 *** M1D4D5_SOLTU) AT3G48740 Solyc03g097610.3 2 1 12 15 0 0 0 0 3 0 1 0 0 0 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** M1D4D6_SOLTU) AT5G50790 Solyc03g097620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVI1_SOLTU) Solyc03g097630.3 795 655 587 698 818 777 770 804 703 676 492 666 541 580 616 S-acyltransferase (AHRD V3.3 *** A0A2G3AT51_CAPCH) Solyc03g097640.3 254 232 492 319 200 237 248 146 192 227 389 229 330 288 429 Mitochondrial import inner membrane translocase subunit TIM8 (AHRD V3.3 *** A0A1U8FY16_CAPAN) Solyc03g097650.3 82 81 107 140 111 134 111 86 86 70 103 76 133 64 101 NAC domain (AHRD V3.3 *** A0A200R3X5_9MAGN) Solyc03g097660.3 0 1 7 3 0 0 0 1 0 5 3 0 0 1 3 Unknown protein Solyc03g097670.4 6158 3542 4056 3169 1246 1248 1361 1253 2810 4490 3003 1482 10835 4180 3924 DNA binding,ATP binding protein (AHRD V3.3 *** A0A2U1MGM2_ARTAN) AT3G48770 Solyc03g097680.4 651 1016 633 784 697 808 735 691 745 746 694 609 1034 1069 681 Pyruvate dehydrogenase E1 component subunit beta (AHRD V3.3 *** A0A2G3CXR3_CAPCH) AT5G50850 Solyc03g097690.3 60 282 309 241 348 327 399 430 349 172 251 321 252 319 182 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1LLY4_ARTAN) AT5G50860 Solyc03g097700.3 1 9 5 1 3 1 1 5 5 2 0 5 14 5 0 O-methyltransferase (AHRD V3.3 *** F6M2M1_VITPS) Solyc03g097703.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8-hydroxyquercetin 8-O-methyltransferase (AHRD V3.3 *-* A0A2G3CXM5_CAPCH) Solyc03g097707.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoglucanase (AHRD V3.3 *-* A0A2G2YFC4_CAPAN) Solyc03g097710.4 1072 569 884 914 476 589 611 505 849 1180 1198 657 488 781 1479 meiosis chromosome segregation family protein (AHRD V3.3 *-* AT3G26890.8) AT5G41110 Solyc03g097720.4 59 53 61 97 136 91 82 87 43 29 63 85 20 60 14 CASP-like protein (AHRD V3.3 *** A0A328D0P9_9ASTE) AT4G25040 Solyc03g097730.2 1 5 0 0 0 1 0 0 0 1 0 2 0 0 0 CASP-like protein (AHRD V3.3 *** A0A2I4FJL7_9ROSI) AT4G25040 Solyc03g097740.1 1395 1036 1098 1210 1025 956 806 1071 1503 1262 1615 1102 926 898 1120 ARM repeat superfamily protein (AHRD V3.3 *** Q9FI58_ARATH) AT5G50900 Solyc03g097750.4 171 329 400 379 331 328 350 339 318 371 299 458 383 375 310 Translocon-associated protein subunit beta (AHRD V3.3 *** V4N6V6_EUTSA),Pfam:PF05753 Solyc03g097760.2 52 37 86 29 40 43 36 55 47 37 52 54 13 34 25 Sterile alpha motif domain (AHRD V3.3 *** A0A200R3W2_9MAGN) Solyc03g097770.2 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 Unknown protein Solyc03g097780.3 681 715 621 596 583 588 627 520 557 501 667 502 642 695 674 sialyltransferase-like protein 2 (AHRD V3.3 *** A0A2I4FKW3_9ROSI) AT3G48820 Solyc03g097800.4 827 1982 1316 1537 1851 1555 1659 1936 1744 1539 1184 1529 2258 1673 1542 V-type proton ATPase subunit C (AHRD V3.3 *** A0A2G2X844_CAPBA) AT1G12840 Solyc03g097810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g097820.2 322 395 371 634 673 869 672 825 470 557 485 659 364 548 280 bHLH transcription factor 022 AT5G50915 Solyc03g097830.3 556 415 491 383 328 261 322 229 307 251 420 309 487 608 514 Poly(A) polymerase I (AHRD V3.3 *** A0A1J3FW86_NOCCA) Solyc03g097840.3 56 60 124 54 19 15 7 16 56 64 118 2 195 61 59 Phosphate carrier protein, mitochondrial (AHRD V3.3 *** A0A2G3A0N1_CAPAN) Solyc03g097850.1 42 51 43 46 56 55 23 48 42 45 43 49 44 78 40 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A0P2_CAPAN) AT5G16860 Solyc03g097855.1 39 36 66 52 29 45 37 14 26 21 54 31 50 63 38 Unknown protein Solyc03g097860.1 0 0 3 0 0 2 1 0 2 0 0 0 1 0 7 Potassium transporter (AHRD V3.3 *** A0A2G2X847_CAPBA) Solyc03g097870.4 1092 781 516 1009 24 13 17 12 284 359 926 57 428 601 948 Bidirectional sugar transporter SWEET (AHRD V3.3 *** M1D7G9_SOLTU) AT3G48740 Solyc03g097880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g097900.3 19345 23817 23017 17442 24769 26210 23656 23881 15512 14741 18610 19057 22726 19218 18692 40S ribosomal protein S3a (AHRD V3.3 *** A0A2G2V880_CAPBA) AT4G34670 Solyc03g097910.4 879 605 569 633 588 600 518 696 1255 997 674 877 568 689 808 putative dehydrogenase AT3G17810 Solyc03g097920.1 1899 1322 1001 997 694 537 576 661 1005 1816 1532 1033 1414 1244 1120 MAP kinase kinase 4 AT1G73500 Solyc03g097930.3 134 62 22 44 34 19 20 11 17 49 62 7 35 70 70 Unknown protein Solyc03g097940.3 121 86 158 221 105 97 89 110 102 112 94 91 91 104 383 Potassium channel SKOR (AHRD V3.3 *** A0A2G3A0N7_CAPAN) Solyc03g097950.4 183 374 441 327 377 469 392 373 368 231 353 289 248 295 380 50S ribosomal protein L29, chloroplastic (AHRD V3.3 *** A0A2G3CA56_CAPCH) AT5G65220 Solyc03g097960.1 14 17 38 2 3 1 0 5 16 49 11 6 32 23 0 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *-* Q9ZUW8_ARATH) AT2G27660 Solyc03g097970.3 1220 941 912 902 647 569 556 708 884 1194 1051 1026 1479 1249 1120 B-cell receptor-associated-like protein (AHRD V3.3 *** Q9LSH0_ARATH) AT3G17780 Solyc03g097980.4 819 715 697 734 796 781 896 876 778 777 718 815 666 815 699 Extra-large guanine nucleotide-binding protein 3 (AHRD V3.3 *** A0A2G2X822_CAPBA) Solyc03g097990.3 798 644 777 536 517 622 554 457 589 677 717 631 577 629 709 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (AHRD V3.3 *** A0A1U8G7N7_CAPAN) AT1G73820 Solyc03g098000.3 3160 2972 1962 2306 2099 1974 1883 2479 3282 3818 2177 3195 2668 2505 2224 Alanine-tRNA ligase, putative (DUF760) (AHRD V3.3 *** Q9LP80_ARATH) AT3G17800 Solyc03g098010.3 19 12 18 20 6 15 16 28 14 80 4 20 7 74 33 phosphate starvation inducible gene TPSI1 AT3G17790 Solyc03g098020.4 1485 960 360 1258 1545 1620 1387 1226 843 1399 556 764 763 312 633 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q94AM5_ARATH) AT1G73480 Solyc03g098030.3 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 Type I inositol polyphosphate 5-phosphatase 5 (AHRD V3.3 *-* IP5P5_ARATH) Solyc03g098050.3 1295 2143 3744 2464 3025 3605 3403 2973 2257 1900 3940 2213 2551 2304 2431 Calmodulin 6 Solyc03g098060.3 823 1238 1051 674 2495 2912 2638 1895 937 571 1509 1054 978 693 1602 zinc-finger homeodomain protein 11-like (AHRD V3.3 *** A0A2I4EVI3_9ROSI) Solyc03g098070.3 563 501 751 668 1234 1268 1238 1115 623 520 924 447 372 505 810 C2H2-like zinc finger protein (AHRD V3.3 *** A0A2U1L7F0_ARTAN) Solyc03g098080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CASP-like protein (AHRD V3.3 *** A0A2G3CXI9_CAPCH) Solyc03g098090.2 2 3 0 4 2 1 4 1 0 0 3 0 0 0 0 CASP-like protein (AHRD V3.3 *** A0A2G3CXI9_CAPCH) Solyc03g098100.4 0 15 0 0 0 0 0 0 14 6 3 2 27 1 5 Methylecgonone reductase (AHRD V3.3 *** A0A2G3CXI4_CAPCH) Solyc03g098110.4 1142 712 744 776 726 658 651 602 744 935 758 796 605 732 983 hypothetical protein (AHRD V3.3 *** AT1G73470.1) AT1G73470 Solyc03g098120.3 81 191 247 230 215 244 290 235 154 100 190 126 268 249 226 40S ribosomal protein (AHRD V3.3 *** AT1G57540.3) AT1G57540 Solyc03g098130.3 354 359 410 375 385 442 414 304 368 309 459 293 453 410 423 hypothetical protein (AHRD V3.3 *-* AT1G07020.1),Pfam:PF06910 AT1G07020 Solyc03g098140.3 301 418 467 491 579 515 499 596 531 470 561 494 394 427 524 Arabinose 5-phosphate isomerase (AHRD V3.3 *** J2F7V0_PSEFL) AT3G54690 Solyc03g098150.3 2603 2915 2712 2556 2682 3325 3004 2959 2864 2157 2522 2347 2605 2870 2279 protein kinase 6 AT1G73460 Solyc03g098160.3 978 620 512 582 448 569 518 536 700 528 595 462 546 591 600 protein NRDE2 homolog (AHRD V3.3 *** A0A2I4GZ24_9ROSI) AT3G17740 Solyc03g098170.3 708 520 694 691 903 771 749 785 495 493 718 665 554 623 791 Tubulin-folding cofactor B (AHRD V3.3 *** A0A2G3CXG8_CAPCH) AT3G10220 Solyc03g098175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4 (AHRD V3.3 *-* A0A1J3D544_NOCCA) Solyc03g098180.3 937 595 521 538 387 452 422 436 376 476 381 533 360 486 563 DHHA1 domain protein (AHRD V3.3 *** F4HRG2_ARATH) AT1G53345 Solyc03g098190.3 36 40 59 44 35 34 14 18 41 37 43 24 38 51 13 NAC domain (AHRD V3.3 *** A0A200QUW8_9MAGN) Solyc03g098200.4 444 425 536 595 331 505 399 345 491 259 454 427 290 425 356 Homeobox-leucine zipper protein HDG12 (AHRD V3.3 *** A0A2G2X830_CAPBA) AT1G73360 Solyc03g098210.4 1202 724 776 473 229 292 263 343 572 1315 536 523 1703 790 462 Cyclic nucleotide gated channel (AHRD V3.3 *** A0A1Y1HP60_KLENI) AT3G17700 Solyc03g098220.4 2337 1441 1585 1331 1443 1406 1256 1470 1315 1958 1695 1466 1194 1269 1313 Long chain base biosynthesis protein 2a (AHRD V3.3 *** A0A2G3CXG9_CAPCH) AT3G48780 Solyc03g098230.3 920 1226 1462 1521 1394 1450 1512 1460 1433 1031 1310 1253 1339 1291 1445 Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial (AHRD V3.3 *** A0A2G2X7N7_CAPBA) AT1G48420 Solyc03g098240.3 818 303 854 448 430 456 364 292 302 568 624 526 382 640 1795 glutamate decarboxylase Solyc03g098250.4 324 654 680 823 685 711 957 669 419 424 420 789 519 768 308 DNA polymerase epsilon subunit (AHRD V3.3 *** A0A2G2X7U4_CAPBA) AT5G22110 Solyc03g098270.1 0 0 0 0 0 1 0 0 0 4 6 0 0 1 0 MYB transcription factor (AHRD V3.3 *-* A0A1Z1N318_PRUPE) Solyc03g098280.4 14720 11638 11143 10971 12023 12091 12712 14124 11894 13465 9131 13315 10187 10232 8740 Argonaute 1b AT1G48410 Solyc03g098290.4 187 285 676 481 391 382 311 177 420 380 829 322 176 298 576 Sucrose synthase (AHRD V3.3 *** K4BJP4_SOLLC) AT1G73370 Solyc03g098300.1 2 23 50 24 17 55 42 49 279 124 101 85 20 8 71 Ornithine decarboxylase (AHRD V3.3 *** A0A1U8G8Q1_CAPAN) Solyc03g098310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ornithine decarboxylase (AHRD V3.3 *** A0A1U8G8Q1_CAPAN) Solyc03g098320.4 2414 892 67 909 1111 928 1034 959 615 752 81 336 376 81 82 Protein REVEILLE 1 (AHRD V3.3 *** A0A2G2XWA2_CAPAN) Solyc03g098330.2 495 287 192 224 154 178 204 247 177 189 191 203 294 265 185 Coiled coil protein (AHRD V3.3 *** A0A1P8B4G0_ARATH) AT4G24900 Solyc03g098340.4 657 814 352 641 720 691 590 903 556 760 437 795 472 676 311 Nucleoporin protein Ndc1-Nup (AHRD V3.3 *** A0A2U1Q2P5_ARTAN) AT1G73240 Solyc03g098360.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine rich repeat containing protein, putative (AHRD V3.3 *** Q0KIK0_SOLDE) Solyc03g098400.2 28 10 10 2 0 0 1 0 2 10 3 2 24 41 0 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6P698_ACTCH) AT3G47110 Solyc03g098410.1 706 576 894 607 874 894 804 749 639 482 840 655 678 625 742 hypothetical protein (AHRD V3.3 *** AT2G25720.1) AT2G25720 Solyc03g098420.3 177 190 157 123 99 111 122 123 180 121 75 91 131 198 123 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q6P2_9MAGN) AT3G02010 Solyc03g098430.4 394 188 414 293 152 188 234 137 204 159 234 211 211 274 425 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A1U8G995_CAPAN) Solyc03g098440.4 389 247 344 247 266 292 272 274 256 310 350 369 155 241 292 Tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** A0A2U1QET0_ARTAN) AT3G17670 Solyc03g098450.3 547 441 876 597 642 674 548 635 570 440 371 839 299 524 401 Protein NETWORKED 3A (AHRD V3.3 *** A0A2G3CXR8_CAPCH) AT3G17680 Solyc03g098460.3 1270 1226 932 1149 998 1192 1129 1058 1249 1527 1271 1803 952 1246 1136 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1MVW0_ARTAN) AT4G27760 Solyc03g098470.3 673 1257 1791 1441 2048 2313 2250 1608 1060 805 1539 1271 1559 1413 1413 Small nuclear ribonucleoprotein E (AHRD V3.3 *** A0A0K9QU94_SPIOL) AT4G30330 Solyc03g098480.1 27 13 46 106 0 1 0 4 39 56 81 2 72 52 247 chromosome alignment-maintaining phosphoprotein 1-like isoform X2 (AHRD V3.3 --* XP_017702391.1) Solyc03g098490.1 68 50 258 102 105 119 93 112 134 92 166 83 225 194 221 DUF761 domain-containing protein/DUF4408 domain-containing protein (AHRD V3.3 *** A0A1Q3AT39_CEPFO) Solyc03g098500.4 0 1 3 0 0 0 0 0 0 0 0 1 0 0 0 ARF GTPase-activating domain-containing protein (AHRD V3.3 *-* A0A1Y1HWJ5_KLENI) AT3G17660 Solyc03g098520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g098530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3MRV1_TRIPR) Solyc03g098535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3MRV1_TRIPR) Solyc03g098540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RVP_2 domain-containing protein (AHRD V3.3 *-* A0A1Q3CL69_CEPFO) Solyc03g098545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3MRV1_TRIPR) Solyc03g098560.2 1 3 5 3 4 2 1 0 1 3 0 0 0 3 10 Unknown protein Solyc03g098570.1 4 0 3 0 2 2 0 0 0 3 0 0 1 2 0 F-box domain (AHRD V3.3 *** A0A200Q3A9_9MAGN) Solyc03g098580.1 5 9 18 34 7 16 21 14 6 9 14 12 17 9 15 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QIL9_9MAGN) Solyc03g098590.3 1339 827 655 692 733 729 692 838 786 1107 745 840 681 647 586 RING/U-box superfamily protein (AHRD V3.3 *** A0A1I9LQQ9_ARATH) Solyc03g098600.3 1611 3154 2261 2011 2411 2449 2378 2880 3051 2318 1838 2780 3584 3156 2296 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 (AHRD V3.3 *** A0A2G2Y1B2_CAPAN) AT1G34130 Solyc03g098610.3 360 693 487 711 661 810 681 764 698 490 586 662 504 672 550 Plastid division protein CDP1, chloroplastic (AHRD V3.3 *** A0A2G2X813_CAPBA) AT3G19180 Solyc03g098620.3 1130 753 691 621 622 692 717 663 696 592 526 762 664 797 772 DNA-binding protein RHL1 (AHRD V3.3 *** A0A1U8G7E0_CAPAN) AT1G48380 Solyc03g098630.4 2305 1001 802 928 940 1052 1102 1002 1173 1344 1078 1173 767 1047 1022 DUF789 domain-containing protein (AHRD V3.3 *-* A0A1Q3BTC9_CEPFO) Solyc03g098640.4 445 544 368 308 240 174 193 209 192 182 205 337 702 568 300 Peroxisomal membrane MPV17/PMP22-like protein (AHRD V3.3 *-* A8J1X1_CHLRE) AT5G19750 Solyc03g098650.3 23 19 52 34 11 22 22 13 12 7 24 25 33 45 71 heavy metal-associated isoprenylated plant protein 22-like (AHRD V3.3 *** A0A1U8GHY5_CAPAN) AT3G21490 Solyc03g098660.3 92 108 242 80 98 75 86 77 90 122 287 71 128 65 80 GRAM domain (AHRD V3.3 *** A0A200Q4W9_9MAGN) Solyc03g098670.1 1 1 0 4 0 0 0 0 0 0 0 0 2 1 15 Kunitz-type protease inhibitor (AHRD V3.3 *** J9XUY3_TOBAC) Solyc03g098680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kunitz family trypsin and protease inhibitor protein (AHRD V3.3 *** A0A2U1P6R3_ARTAN) Solyc03g098700.1 3 3 7 12 3 10 6 6 21 39 19 48 5 2 8 Cysteine protease inhibitor 1 (AHRD V3.3 *** CPI1_SOLTU) Solyc03g098710.1 126 190 512 606 1551 2109 1585 2020 2981 500 1332 1690 137 463 59 Kunitz-like protease inhibitor (AHRD V3.3 *** I6QIF0_HELAN) Solyc03g098720.3 1 13 17 70 34 38 49 41 509 23 7 52 0 89 8 Kunitz trypsin inhibitor (AHRD V3.3 *** Q39869_SOYBN) Solyc03g098730.1 616 205 243 126 41 36 58 53 152 396 442 187 125 154 243 Kunitz-type protease inhibitor (AHRD V3.3 *** J9XUY3_TOBAC) Solyc03g098735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g098740.1 25 32 26 16 3 8 6 2 21 23 17 12 41 29 94 Biotic cell death-associated protein (AHRD V3.3 *** Q850R9_NICGU) Solyc03g098745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc03g098750.3 388 180 387 213 147 212 196 138 145 312 425 192 165 229 357 Unknown protein Solyc03g098760.3 1 4 15 42 8 2 0 2 54 6 3 2 12 7 23 Serine protease inhibitor 1 (AHRD V3.3 *** A0A2G2XWX1_CAPAN) Solyc03g098770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g098780.2 1256 1803 3644 2948 9519 10954 9418 8503 45308 9807 28696 27387 937 3357 2059 Aspartic protease inhibitor 1 (AHRD V3.3 *** API1_SOLTU) Solyc03g098790.3 121 455 368 359 148 323 150 171 4794 4159 9811 5424 275 1103 200 cathepsin D inhibitor protein Solyc03g098795.1 508 1070 451 468 421 380 200 282 33676 14463 25082 19817 858 1396 1184 Proteinase inhibitor type-2 (AHRD V3.3 *** A0A2G2XU31_CAPAN) Solyc03g020100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ycf2 (chloroplast) (AHRD V3.3 --* YP_009354355.1) Solyc03g020090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1S5S0A7_9APIA) Solyc03g020080.4 20 98 36 29 5 3 10 5 1171 304 687 560 78 39 37 Proteinase inhibitor type-2 (AHRD V3.3 *** A0A2G2XU31_CAPAN) Solyc03g020070.4 66 81 74 95 90 96 103 63 359 204 255 255 94 40 46 Proteinase inhibitor type-2 (AHRD V3.3 *** A0A2G2XU31_CAPAN) Solyc03g020060.3 20 76 19 11 0 3 9 4 144 309 173 64 6 43 9 Proteinase inhibitor type-2 (AHRD V3.3 *** A0A2G2V3L6_CAPBA) Solyc03g020050.3 20 81 9 3 0 0 0 0 68 1035 142 46 0 93 20 VIROID-INDUCIBLE PROTEINASE INHIBITOR II Solyc03g020040.3 3248 3543 4169 1576 767 809 946 1099 4086 3392 3440 1272 9206 1738 1825 Proteinase inhibitor type-2 (AHRD V3.3 *** A0A2G3AW51_CAPCH) Solyc03g020030.3 112 260 198 139 172 173 126 294 618 497 410 135 743 129 29 Proteinase inhibitor type-2 (AHRD V3.3 *** A0A2G3A0T9_CAPAN) Solyc03g020020.3 12715 8067 5861 9412 5856 6033 7299 6524 4777 9363 5682 6845 5970 7380 5375 embryo defective 2016 (AHRD V3.3 *** AT3G05680.2) AT3G05680 Solyc03g020010.1 2 4 8 5 0 2 0 1 9 7 7 6 17 4 13 Lemir (AHRD V3.3 *** O48625_SOLLC) AT1G17860 Solyc03g150101.1 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 Unknown protein Solyc03g019980.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6P698_ACTCH) AT3G47110 Solyc03g019960.3 370 633 490 472 808 714 674 945 511 358 314 601 355 496 288 CDT1 Geminin-binding domain-like protein (AHRD V3.3 *** A0A2U1N3U2_ARTAN) Solyc03g019950.3 1601 1130 1664 1967 1365 1575 1853 946 1255 1453 1933 1221 1076 1421 2941 Endosomal targeting BRO1-like domain-containing protein (AHRD V3.3 *** A0A2U1N0L7_ARTAN) AT1G73390 Solyc03g019940.4 816 866 634 693 767 739 730 815 695 842 688 664 731 760 810 Asparagine--tRNA ligase (AHRD V3.3 *** A0A2G2X8U3_CAPBA) AT4G17300 Solyc03g019930.4 606 399 527 474 511 500 493 477 532 654 502 640 350 478 580 hypothetical protein (AHRD V3.3 *-* AT1G73380.1) AT1G73380 Solyc03g019920.1 26 21 43 36 65 86 52 76 41 14 39 33 10 12 9 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9SLI0_ARATH) AT1G54540 Solyc03g019910.3 1528 1069 1282 1359 1110 1280 1366 1018 963 1170 1370 1149 1061 1194 1335 translation initiation factor (AHRD V3.3 *** AT4G39630.1) AT4G39630 Solyc03g019900.3 807 964 928 764 845 879 824 991 899 833 687 954 933 819 824 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A1U8FXG4_CAPAN) AT3G19980 Solyc03g019890.3 241 1251 1971 1122 2161 2224 2411 2821 1849 1355 1657 1254 477 1127 2232 beta-galactosidase 7 AT5G63810 Solyc03g019880.3 753 594 823 656 614 572 515 528 799 779 733 628 545 726 926 UPF0426 protein, chloroplastic (AHRD V3.3 *** A0A2G3AW71_CAPCH) AT1G28150 Solyc03g019870.4 3 0 2 1 0 0 0 0 0 2 0 0 2 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200QAC3_9MAGN) AT1G73340 Solyc03g019860.3 293 230 172 156 198 193 199 178 224 189 174 230 258 212 203 Unknown protein Solyc03g019850.3 697 339 436 462 440 420 358 363 441 474 523 369 472 427 588 MAP kinase kinase 5 AT5G40440 Solyc03g019840.4 235 250 276 189 138 167 163 168 157 104 154 190 355 292 265 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* AT5G58210.4) Solyc03g019830.4 21 23 21 20 6 37 16 15 47 21 36 22 11 15 34 Receptor kinase (AHRD V3.3 *** B6SWV2_MAIZE) Solyc03g019820.3 1074 25 0 13 5 10 3 0 6 30 39 9 4 50 106 tonoplast intrinsic protein 3.2 AT1G17810 Solyc03g019810.3 362 305 423 343 270 343 341 206 204 253 417 230 204 297 417 Metallo-dependent (AHRD V3.3 *-* A0A2P6TIH0_CHLSO) Solyc03g019800.4 2516 2548 2708 1877 2222 2372 1819 1635 1681 1369 2761 1771 2553 2435 3439 Cyclin-D-binding Myb-like transcription factor 1 (AHRD V3.3 *-* A0A1J3E546_NOCCA) AT5G41020 Solyc03g019790.3 253 767 186 359 906 755 846 697 690 450 298 208 286 138 516 alpha-galactosidase AT5G08370 Solyc03g019780.4 8758 17339 13357 10570 18482 16945 16270 17560 10150 9566 10228 12591 16197 13511 10564 40S ribosomal protein SA (AHRD V3.3 *** A0A1U8G5B2_CAPAN) AT1G72370 Solyc03g019770.4 315 181 243 214 122 148 132 63 192 172 376 169 265 269 308 testis-expressed sequence 2 protein-like (AHRD V3.3 *** A0A2I4FFJ2_9ROSI) AT1G17820 Solyc03g019760.4 1454 1491 1515 1574 994 1132 853 1018 1662 1342 1529 1580 1336 1639 1496 ABC transporter G family member 11 (AHRD V3.3 *** A0A2G3AW36_CAPCH) AT1G17840 Solyc03g019750.3 38 22 27 16 16 13 12 9 21 65 4 28 93 27 29 alpha-1,4-glucan-protein synthase [UDP-forming]-like (AHRD V3.3 *** A0A1S3YIZ3_TOBAC) Solyc03g019740.1 0 4 3 6 3 8 4 1 1 3 6 3 0 3 4 Unknown protein Solyc03g019730.4 555 722 770 745 920 928 910 960 766 607 615 966 867 896 597 SUMO activating enzyme 1B (AHRD V3.3 *** A0A2U1QAH6_ARTAN) AT5G50680 Solyc03g019720.4 685 1176 1100 992 1324 1498 1249 1500 1244 907 1050 1327 1174 1179 1009 Gamma carbonic anhydrase-like 2, mitochondrial (AHRD V3.3 *** A0A1U8FYL3_CAPAN) AT3G48680 Solyc03g019710.3 3431 1049 1610 1102 79 106 53 80 2147 2015 3633 2310 432 1416 3918 LETDR8 Solyc03g019700.1 295 227 272 389 334 395 326 344 255 318 409 500 208 251 350 Transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** Q9SMN3_ARATH) AT5G63500 Solyc03g019690.1 3 1 0 2 0 0 0 0 1 0 0 4 0 0 0 Serine protease inhibitor 1 (AHRD V3.3 *** A0A2G2XWH1_CAPAN) Solyc03g019680.3 537 405 309 390 226 269 239 272 454 329 361 254 377 297 433 CBS domain containing protein (AHRD V3.3 *** B6U1W0_MAIZE) AT5G50640 Solyc03g019670.3 432 788 882 739 829 720 731 804 1147 938 798 778 808 578 793 Non-specific phospholipase C1 (AHRD V3.3 *** A0A2G2V4Y9_CAPBA) AT3G48610 Solyc03g019660.4 335 504 404 583 992 678 843 988 445 816 398 785 349 446 309 Thylakoid lumenal 17.9 kDa protein, chloroplastic (AHRD V3.3 *** A0A2G2V4Z7_CAPBA) AT4G24930 Solyc03g019650.3 1412 867 1439 1236 1095 1181 1154 867 1231 1035 1669 878 1058 1332 2720 Major facilitator superfamily protein (AHRD V3.3 *-* A0A2U1MHC8_ARTAN) Solyc03g019640.1 10 22 13 12 15 20 21 25 18 17 17 16 19 23 35 DnaJ domain (AHRD V3.3 *** A0A200QGM0_9MAGN) AT5G53150 Solyc03g019630.1 4 0 1 5 2 1 4 6 3 1 0 4 0 2 0 DnaJ domain (AHRD V3.3 *-* A0A200R430_9MAGN) AT5G37440 Solyc03g110840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit C (AHRD V3.3 *-* A0A0D3GXF4_9ORYZ) Solyc03g110850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit C (AHRD V3.3 *-* A0A0D3GXF4_9ORYZ) Solyc03g110860.3 785 769 914 983 2068 2049 1853 1939 978 1315 928 1423 778 724 677 Nuclear transcription factor Y subunit C-4 (AHRD V3.3 *** A0A2G3CY59_CAPCH) AT3G48590 Solyc03g110870.3 1601 1816 3175 4323 2497 3060 3007 1848 1257 1535 2463 1917 2579 2483 3565 Unknown protein Solyc03g110880.4 3243 3064 2257 2342 3011 2707 2864 3712 3212 3088 2060 3335 2518 3069 2315 RNA polymerase 4 second largest subunit (RPD2) AT3G23780 Solyc03g110890.1 9 18 4 39 43 16 25 15 13 26 31 25 10 12 39 glucuronoxylan 4-O-methyltransferase 1 (AHRD V3.3 *** A0A2I4F5K0_9ROSI) AT4G24910 Solyc03g110900.4 5559 3826 4880 4098 4125 5041 4328 3795 3625 4072 4700 3371 3674 3763 4798 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1N2C4_ARTAN) Solyc03g110910.4 2461 1693 1114 994 1047 1100 1021 1168 1223 1634 1051 1313 1722 1435 1435 Elongator complex protein 3 (AHRD V3.3 *** K4BJV4_SOLLC) AT5G50320 Solyc03g110920.2 434 328 350 352 433 333 410 252 288 352 246 324 300 262 291 HVA22-like protein (AHRD V3.3 *** A0A1U8FXC4_CAPAN) AT4G36720 Solyc03g110930.3 326 201 133 104 77 128 107 64 98 89 121 130 208 203 159 30S ribosomal protein S21, chloroplastic (AHRD V3.3 *-* A0A2G3CY41_CAPCH) Solyc03g110940.3 402 574 397 330 598 550 599 553 360 343 284 276 679 501 229 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1P6F2_ARTAN) AT5G50330 Solyc03g110950.1 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 Transcription factor GRAS (AHRD V3.3 *** A0A200R4D0_9MAGN) Solyc03g110960.3 142 271 338 275 452 367 397 353 266 305 307 294 276 279 219 Nucleoside diphosphate kinase (AHRD V3.3 *** A0A1U8FXC0_CAPAN) AT5G63310 Solyc03g110970.2 144 212 152 200 270 203 241 224 231 233 193 221 199 211 192 GDP-mannose transporter GONST3 (AHRD V3.3 *** A0A1U8FXG8_CAPAN) AT1G76340 Solyc03g110975.1 10 13 3 19 7 19 12 19 20 28 8 31 21 26 3 Unknown protein Solyc03g110980.4 2 55 112 93 120 162 169 131 53 40 57 100 30 62 62 hypothetical protein (AHRD V3.3 *** AT3G48490.1) AT3G48490 Solyc03g110990.1 3 25 27 57 29 17 22 13 32 11 68 23 13 13 37 Unknown protein AT5G50335 Solyc03g111000.3 14 2 14 6 1 5 0 1 5 1 4 0 3 6 32 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A2G2X869_CAPBA) Solyc03g111010.4 1137 1405 1351 1453 1203 1041 1071 1138 2090 1627 1638 1413 1587 1577 1916 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A0F7JIC2_NICBE) Solyc03g111030.3 593 933 868 748 1109 1172 1177 1211 886 569 728 929 691 911 704 hypothetical protein (AHRD V3.3 *** AT5G50350.1) AT5G50350 Solyc03g111020.3 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 Unknown protein Solyc03g111040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine histidine transporter-like 2 (AHRD V3.3 *** A0A2G2X895_CAPBA) Solyc03g111050.3 605 695 749 542 506 460 455 448 513 313 534 492 772 849 766 CONSTANS interacting protein 5 AT3G48500 Solyc03g111060.3 27 40 29 35 20 26 26 21 23 28 19 11 22 13 10 3-oxoacyl-reductase (AHRD V3.3 *-* B6THT6_MAIZE) Solyc03g111070.3 36 13 48 23 26 25 25 26 17 21 33 37 26 20 18 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic (AHRD V3.3 *-* A0A2G2ZCU2_CAPAN) Solyc03g111080.3 8 5 29 10 6 12 8 4 11 7 10 12 14 20 24 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic (AHRD V3.3 *-* A0A2I4HMF6_9ROSI) Solyc03g111090.4 1924 1587 1491 1053 1139 1249 1292 1280 1483 1234 1412 1174 1389 1550 1534 transcription factor GTE10-like (AHRD V3.3 *** A0A1U8FX92_CAPAN) Solyc03g111100.1 2177 699 139 156 99 79 59 88 199 482 799 446 406 812 1901 At3g48510 (AHRD V3.3 *** Q9SMP6_ARATH) AT5G63350 Solyc03g111110.1 8 1 0 9 10 11 10 14 0 1 0 4 1 2 14 Unknown protein Solyc03g111130.1 3 0 5 0 2 5 0 0 0 1 0 8 3 0 0 Malate synthase (AHRD V3.3 *** A0A1U8FXE5_CAPAN) AT5G03860 Solyc03g111140.3 1986 204 81 82 180 218 218 206 163 317 160 201 109 113 187 Malate synthase (AHRD V3.3 *** A0A1U8FXE5_CAPAN) AT5G03860 Solyc03g111150.4 204 289 288 277 342 400 378 316 317 265 255 252 314 271 126 DUF3537 domain-containing protein (AHRD V3.3 *** A0A1Q3BK74_CEPFO) Solyc03g111160.3 246 181 218 278 231 174 204 232 262 193 309 181 236 224 253 Phosphoglucan phosphatase DSP4, chloroplastic (AHRD V3.3 *** A0A1U8EVM1_CAPAN) AT3G52180 Solyc03g111170.3 337 508 318 411 909 739 649 942 507 888 895 725 216 395 286 4-coumarate-CoA ligase (AHRD V3.3 *** E5GBV5_CUCME) AT5G63380 Solyc03g111180.3 685 809 883 837 860 922 877 899 1072 811 878 929 1147 1093 843 Aspartyl aminopeptidase (AHRD V3.3 *** A0A1U8FXA5_CAPAN) AT5G60160 Solyc03g111190.3 0 4 0 2 0 0 0 0 0 3 5 0 0 1 0 O-fucosyltransferase (AHRD V3.3 *-* A0A2P5DFZ1_TREOI) Solyc03g111200.3 1212 1843 1760 1357 1760 1748 1659 1577 1180 1179 1260 1278 1838 1571 1554 Adenylate kinase (AHRD V3.3 *** A0A200R495_9MAGN),Pfam:PF00406 AT5G50370 Solyc03g111210.4 256 208 303 292 185 153 215 125 162 145 293 139 206 256 416 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q8N4_9MAGN) Solyc03g111220.1 43 19 37 29 24 10 22 18 25 20 38 16 22 20 38 U-box domain-containing protein 52-like (AHRD V3.3 --* XP_019070585.1) Solyc03g111230.4 14902 23428 20811 17099 21200 23721 22917 19988 12476 13962 16100 16580 25931 21907 18878 60S ribosomal protein L17 (AHRD V3.3 *** A0A2U1LCZ6_ARTAN) Solyc03g111240.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g111250.3 1675 1581 1430 1496 1724 1429 1410 1748 1568 1796 1158 1561 1756 1568 1063 SWI/SNF complex component SNF12-like protein (AHRD V3.3 *** A0A2G2X8F5_CAPBA) Solyc03g111260.3 427 664 793 646 523 497 579 509 876 500 628 781 642 1014 770 Ribonuclease J (AHRD V3.3 *** A0A1J3CQJ0_NOCCA) AT5G63420 Solyc03g111270.2 1349 1276 1165 907 1394 1065 1168 1258 898 1025 846 1176 1198 1192 955 SAP domain-containing protein (AHRD V3.3 *** F4KAQ0_ARATH) AT5G63460 Solyc03g150148.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc03g111280.1 0 1 71 0 0 2 0 0 1 4 43 4 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200QGE7_9MAGN) AT3G48520 Solyc03g111290.2 18 29 115 6 5 0 0 1 19 139 232 34 11 24 9 Cytochrome P450 (AHRD V3.3 *** A0A200QGE7_9MAGN) AT3G48520 Solyc03g111300.1 2 5 136 0 0 0 1 0 6 15 17 4 1 0 8 Cytochrome P450 (AHRD V3.3 *** A0A200QGE7_9MAGN) AT3G48520 Solyc03g111310.3 2155 520 530 538 289 283 257 314 487 828 542 419 478 877 1539 Snf1-related protein kinase regulatory subunit gamma-1 (AHRD V3.3 *** A0A1J6IJ95_NICAT) AT3G48530 Solyc03g111320.1 2424 1707 1717 1337 1527 1401 1129 1540 1696 2309 1776 1631 1816 1713 1938 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1S4CY62_TOBAC) AT5G50380 Solyc03g111330.4 541 368 440 378 352 417 501 372 382 448 473 399 434 464 524 UPF0235 protein (AHRD V3.3 *** A0A1U8G4Z0_CAPAN) AT5G63440 Solyc03g111340.4 279 536 421 479 572 511 574 626 544 426 471 583 663 502 403 Ubiquitin-like modifier-activating enzyme 5 (AHRD V3.3 *** A0A1U8FY81_CAPAN) AT1G05350 Solyc03g111350.3 48 169 284 245 225 282 372 269 153 111 142 232 134 280 73 Deoxycytidylate deaminase (AHRD V3.3 *** A0A1U8FX71_CAPAN) AT3G48540 Solyc03g111360.3 100 136 125 133 104 124 100 111 132 88 89 158 139 172 110 Oxygen-independent coproporphyrinogen-III oxidase-like protein (AHRD V3.3 *** A0A2G3CCW7_CAPCH) AT5G63290 Solyc03g111370.3 686 518 695 511 537 562 605 499 525 610 538 556 648 614 529 C2H2-like zinc finger protein (AHRD V3.3 *** Q8VZP2_ARATH) AT5G63280 Solyc03g111380.3 1009 1935 1448 1581 2351 1998 1926 2615 1514 1576 1187 1765 1573 1837 1451 Tubulin gamma chain (AHRD V3.3 *** Q1HMQ7_TOBAC) AT3G61650 Solyc03g111390.4 986 1513 1006 818 994 1244 1160 1057 989 466 955 793 1839 1573 1569 kelch domain-containing protein 4 (AHRD V3.3 *** A0A2I4DLP8_9ROSI) AT5G50310 Solyc03g111400.1 3 5 1 7 4 15 7 12 15 10 6 8 9 9 5 Adenine/guanine permease AZG1 (AHRD V3.3 *** A0A2G2X883_CAPBA) AT5G50300 Solyc03g111410.3 481 343 451 518 305 378 376 295 402 351 500 344 409 445 539 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3B6Y6_CEPFO) AT5G18000 Solyc03g111415.1 0 0 1 0 21 1 2 0 1 1 0 0 0 0 12 Unknown protein Solyc03g111450.3 0 6 4 14 3 0 1 10 6 2 0 11 1 2 0 Nuclear transcription factor Y subunit C (AHRD V3.3 *-* A0A0D3GXF4_9ORYZ) Solyc03g111460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit C (AHRD V3.3 *-* A0A0D3GXF4_9ORYZ) Solyc03g111470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit C-4 (AHRD V3.3 *** A0A2G3CY59_CAPCH) Solyc03g111500.3 335 276 177 202 306 268 236 318 329 350 210 307 347 333 203 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3B6Y6_CEPFO) AT5G18000 Solyc03g111510.3 12 18 18 21 35 21 16 24 22 12 23 6 13 14 18 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NQ36_ARTAN) Solyc03g111520.3 1 0 2 1 0 0 0 1 0 0 0 0 2 0 0 Cysteine-rich receptor-like protein kinase 7 (AHRD V3.3 *-* A0A2G2ZVX4_CAPAN) Solyc03g111530.4 3 2 0 0 0 0 0 0 0 3 0 0 0 8 0 Cysteine-rich receptor-like protein kinase (AHRD V3.3 *** A0A2K3LJD5_TRIPR) Solyc03g111540.2 5 1 10 1 8 0 2 1 4 3 6 2 7 8 7 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2X8E7_CAPBA) Solyc03g111550.4 776 1122 995 1654 1050 965 747 1014 1000 1523 893 1254 1582 1000 735 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3CCU4_CAPCH) AT3G48460 Solyc03g111570.4 3401 3262 2707 2852 2787 3029 2958 3259 3058 3184 2388 2875 2586 3059 2602 callose synthase 10 (AHRD V3.3 *** A0A2I4E5T8_9ROSI) AT2G36850 Solyc03g111580.3 2578 2225 2164 2208 2454 2554 2406 2655 2590 2434 1894 2354 2365 2293 2189 Zinc finger transcription factor 27 AT3G48440 Solyc03g111590.4 915 1103 1269 1180 1484 1526 1576 1640 1444 921 1311 1214 967 1340 1172 Lysine-specific demethylase REF6 (AHRD V3.3 *** A0A1U8FXA8_CAPAN) AT3G48430 Solyc03g111600.4 265 419 312 460 453 570 523 517 415 266 252 471 382 449 255 DNA-(apurinic or apyrimidinic site) lyase (AHRD V3.3 *** A0A328DPF0_9ASTE) AT3G48425 Solyc03g111610.3 142 205 180 226 252 207 218 256 261 186 185 174 216 150 207 Haloacid dehalogenase-like hydrolase domain-containing protein (AHRD V3.3 *** A0A2G3CCT0_CAPCH),Pfam:PF13419 AT3G48420 Solyc03g111620.1 37 16 22 25 11 6 19 9 19 34 33 9 13 15 10 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MVU3_ARTAN) Solyc03g111630.4 207 188 182 143 259 185 224 216 182 216 155 191 185 197 289 programmed cell death protein 4-like (AHRD V3.3 *** A0A2I4H0D9_9ROSI) AT5G63190 Solyc03g111640.4 5649 2905 2795 2170 2140 2301 1946 2349 2602 3758 1968 2601 2625 2924 2995 programmed cell death protein 4-like (AHRD V3.3 *** A0A2I4H0D9_9ROSI) AT5G63190 Solyc03g111650.4 586 598 578 608 824 699 634 802 693 675 541 770 594 700 525 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G3CCT7_CAPCH) AT5G50280 Solyc03g111660.3 695 916 698 802 916 971 877 979 830 823 655 797 1135 911 965 Peptidase C78%2C ubiquitin fold modifier-specific peptidase 1/ 2 (AHRD V3.3 *** AT3G48380.1) AT3G48380 Solyc03g111670.3 659 2103 2041 1789 3307 2728 2665 3575 2342 1758 1916 2318 1525 1621 1116 Protein kinase (AHRD V3.3 *** D6N3G3_MALDO) AT2G26730 Solyc03g111680.3 226 464 958 685 1118 1440 1361 1356 794 498 556 1227 392 761 480 DNA polymerase III subunit gamma/tau (AHRD V3.3 *** A0A2K3PCP8_TRIPR) AT4G24790 Solyc03g111690.4 180 694 355 708 439 358 275 338 595 356 460 472 524 612 1260 Pectate lyase (AHRD V3.3 *** A0A2G2ZW27_CAPAN) AT4G24780 Solyc03g111700.3 1294 661 403 581 367 360 319 377 460 1057 658 542 418 452 690 Metallo-hydrolase/oxidoreductase superfamily protein (AHRD V3.3 *** A0A2U1M7M5_ARTAN),Pfam:PF13483 AT1G29700 Solyc03g111705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc03g111710.3 162 93 488 131 125 112 240 117 213 228 301 131 133 116 305 BTB/POZ and TAZ domain-containing protein 2 (AHRD V3.3 *** A0A2G2X8F9_CAPBA) AT5G63160 Solyc03g111720.3 480 456 1051 725 532 447 421 462 1089 1681 1925 619 603 456 474 Peptide methionine sulfoxide reductase (AHRD V3.3 *** MSRA_SOLLC) Solyc03g111730.3 35 22 19 19 2 9 2 6 8 9 44 3 16 47 27 KDEL-tailed cysteine endopeptidase AT5G50260 Solyc03g111740.3 375 287 285 366 260 298 367 246 269 243 361 285 311 305 273 WD40 repeat (AHRD V3.3 *** A0A200R4I2_9MAGN) AT5G50230 Solyc03g111750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD40 repeat (AHRD V3.3 *-* A0A200R4I2_9MAGN) Solyc03g111760.3 4 12 126 40 41 59 48 24 21 40 34 60 16 22 10 Argonaute15 Solyc03g111770.3 723 1234 1712 1280 1409 1458 1131 1225 1283 948 1626 1251 1204 1158 1486 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9SB70_ARATH) AT4G24760 Solyc03g111780.1 13 15 17 26 11 8 8 5 9 20 21 2 17 16 47 Transducin/WD40 repeat protein (AHRD V3.3 *** A0A2K3N157_TRIPR) Solyc03g111790.4 73 151 114 172 136 132 170 110 156 130 145 125 107 152 149 Centromere protein X (AHRD V3.3 *** A0A1U8FY32_CAPAN) AT1G78790 Solyc03g111800.2 832 408 271 114 9 9 1 1 114 680 320 48 761 512 189 Leucine-rich repeat receptor-like kinase (AHRD V3.3 *** A0A0M3L7B4_SOLLC) AT2G31880 Solyc03g111810.2 861 1692 1304 1507 899 854 531 788 1608 1888 1497 506 1634 1868 1127 Sieve element occlusion a (AHRD V3.3 *** E2FKJ8_9SOLN) AT3G01680 Solyc03g111815.1 156 203 414 270 79 87 81 50 524 758 1246 749 167 205 65 Sieve element occlusion (AHRD V3.3 *** A0A200RCW8_9MAGN) AT3G01680 Solyc03g111830.4 865 364 355 482 442 446 380 395 442 839 673 477 528 449 464 Protein-L-isoaspartate O-methyltransferase (AHRD V3.3 *** A0A2G2X8E9_CAPBA),Pfam:PF01135 AT5G50240 Solyc03g111840.3 1259 2731 2204 2677 2845 2213 2293 2861 2121 1985 1590 2432 1785 1895 1505 RNA-binding protein (AHRD V3.3 *** Q40270_MESCR) AT4G24770 Solyc03g111850.3 1092 1895 1796 1791 1853 2002 1789 1973 2017 1799 1758 1959 2200 2144 1642 Indole-3-glycerol phosphate synthase (AHRD V3.3 *** A0A2G3CCR7_CAPCH) AT5G48220 Solyc03g111860.1 5 7 65 3 20 21 21 14 13 15 19 7 24 25 25 Glyoxal oxidase-related protein (AHRD V3.3 *** F2X8C7_CAPAN) Solyc03g111870.3 1073 1152 1047 1047 1333 1152 1274 1378 1451 1414 1265 1107 1694 1320 1001 E3 ubiquitin-protein ligase RGLG2-like (AHRD V3.3 *** A0A2I4E6G4_9ROSI) Solyc03g111880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G2X8H9_CAPBA) Solyc03g150149.1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A2U1N9D6_ARTAN) Solyc03g111885.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1PEB2_ARTAN) Solyc03g150150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A2U1L4E8_ARTAN) Solyc03g111920.2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 71A6 (AHRD V3.3 *** A0A2G2ZZC6_CAPAN) AT3G48310 Solyc03g111930.4 2 5 14 0 17 11 8 10 5 4 1 18 24 5 0 Cytochrome P450 71A6 (AHRD V3.3 *** A0A2G2ZZC6_CAPAN) AT3G48310 Solyc03g111940.2 13 2 19 14 0 6 8 9 11 8 3 11 5 9 15 Cytochrome P450 71A6 (AHRD V3.3 *** A0A2G2ZZC6_CAPAN) AT3G48310 Solyc03g111950.3 22 11 13 1 1 2 1 1 1 7 2 10 1 2 3 Cytochrome P450 71A6 (AHRD V3.3 *** A0A2G2ZZF2_CAPAN) AT3G48310 Solyc03g111953.1 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A2U1PEB2_ARTAN) Solyc03g111957.1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 Cytochrome P450 (AHRD V3.3 *-* A0A2U1L4E8_ARTAN) Solyc03g111970.4 126 122 114 183 167 263 233 239 250 199 277 211 69 116 92 Cytochrome P450 71A6 (AHRD V3.3 *** A0A2G2ZZC6_CAPAN) AT3G48310 Solyc03g150151.1 0 0 2 0 0 0 0 0 0 1 9 3 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A2U1PE88_ARTAN) Solyc03g111990.4 0 3 0 0 0 0 1 2 0 0 0 0 0 0 0 Cytochrome P450 71A6 (AHRD V3.3 *** A0A2G2ZZC6_CAPAN) AT3G48310 Solyc03g111993.1 0 0 0 0 0 0 0 0 0 6 0 0 3 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A2U1PEB2_ARTAN) Solyc03g111997.1 2 0 0 5 0 0 0 0 0 0 0 0 1 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1PEB2_ARTAN) Solyc03g112010.4 628 1004 214 699 1090 976 1048 1066 837 492 297 558 491 362 312 Cytochrome P450 71A6 (AHRD V3.3 *** A0A2G3CY69_CAPCH) AT3G48310 Solyc03g112013.1 74 31 15 141 23 24 26 16 53 29 27 23 54 13 53 Cytochrome P450 (AHRD V3.3 *-* A0A2U1PEB2_ARTAN) AT5G35920 Solyc03g112017.1 7 13 0 32 8 2 7 3 11 3 0 1 10 2 2 Cytochrome P450 (AHRD V3.3 *-* A0A2U1PE88_ARTAN) Solyc03g112030.3 80 552 218 453 876 775 728 1027 509 284 235 471 101 209 151 Cytochrome P450 71A6 (AHRD V3.3 *** A0A2G3CY66_CAPCH) AT3G48310 Solyc03g112040.1 0 5 0 4 0 0 0 1 4 1 0 8 11 5 15 Cytochrome P450 71A6 (AHRD V3.3 *** A0A2G3CY66_CAPCH) AT3G48310 Solyc03g112050.4 7644 5168 5778 6779 3920 4865 5212 3435 4454 4645 6370 4697 5094 5654 6982 Serine/threonine-protein kinase AFC1 (AHRD V3.3 *** A0A1U8FX08_CAPAN) AT4G24740 Solyc03g112060.3 437 685 719 737 1078 1139 1192 1261 671 547 519 988 708 894 702 Quinolinate synthase, chloroplastic (AHRD V3.3 *** A0A2G3CY80_CAPCH) AT5G50210 Solyc03g112070.4 1292 1880 1194 1095 1183 1079 1027 1473 1010 1080 924 1458 1615 1524 1042 D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** A0A1U8FY27_CAPAN) AT4G34200 Solyc03g150152.1 4 3 0 1 3 1 2 1 0 2 0 2 1 0 11 Unknown protein Solyc03g112080.1 151 93 75 153 65 82 96 93 90 123 118 103 156 125 176 Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase (AHRD V3.3 *** A0A1U8FY22_CAPAN) AT4G24730 Solyc03g112090.3 33 8 31 7 4 9 12 6 11 26 23 23 11 2 12 High-affinity nitrate transporter (AHRD V3.3 *-* A0A2U1PC97_ARTAN) Solyc03g112100.3 15 7 21 18 2 5 2 7 18 5 9 3 11 6 33 High-affinity nitrate transporter 3.2 (AHRD V3.3 *** A0A2G3CY81_CAPCH) AT5G50200 Solyc03g112110.1 1 2 6 3 2 9 7 11 11 4 9 11 9 2 2 E3 ubiquitin-protein ligase TRIP12-like (AHRD V3.3 *-* XP_020155414.1) Solyc03g112120.3 5 4 16 10 9 11 17 9 4 0 15 9 8 3 14 Exopolyphosphatase (AHRD V3.3 *** A0A2I0WCE4_9ASPA) Solyc03g112130.1 135 112 145 146 97 48 41 75 109 91 216 101 102 83 104 DUF868 domain-containing protein (AHRD V3.3 *** A0A1Q3BAU9_CEPFO) Solyc03g112140.4 483 527 540 629 506 581 604 611 466 421 619 542 602 535 623 MAP kinase kinase kinase 27 AT3G48260 Solyc03g112150.1 1594 2065 767 1384 2196 1546 1467 2734 1317 2480 534 1944 1196 1105 640 Elongation factor Tu (AHRD V3.3 *** A0A2G3CY71_CAPCH) AT4G20360 Solyc03g112160.3 1429 692 717 960 384 416 372 401 802 933 809 794 1434 956 1220 Drought induced 19 protein-like (AHRD V3.3 *** A0A200RD12_9MAGN) Solyc03g112170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pectinesterase inhibitor-like (AHRD V3.3 *** A0A2G3A1B6_CAPAN) AT3G17220 Solyc03g112180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pectinesterase inhibitor-like (AHRD V3.3 *** A0A2G3A1A3_CAPAN) AT3G17220 Solyc03g112190.4 295 258 207 221 225 215 202 207 236 186 243 219 248 288 221 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2X8Y7_CAPBA) AT3G48250 Solyc03g112200.1 571 356 653 723 307 255 229 155 421 512 855 220 343 319 898 Unknown protein Solyc03g112210.1 369 134 476 426 44 33 32 17 139 211 496 113 190 342 1182 Unknown protein Solyc03g112220.1 356 662 1777 1315 700 515 484 345 790 956 875 425 600 545 1518 Unknown protein Solyc03g112230.4 22476 6032 10141 4890 3750 3579 3503 3949 5149 7263 4512 5003 6274 6628 5618 PB1 domain, Zinc finger, ZZ-type, UBA-like, Next to BRCA1, central domain protein (AHRD V3.3 *-* A0A2U1P8J3_ARTAN) AT4G24690 Solyc03g112240.1 10 35 19 49 41 55 38 39 43 39 62 31 30 26 83 Unknown protein Solyc03g112250.1 0 7 0 0 12 0 3 0 1 1 7 0 0 1 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A2G3CYK5_CAPCH) Solyc03g112260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A2G3CYK5_CAPCH) Solyc03g112270.3 6905 3770 3297 3201 2072 2000 1705 2379 2556 4564 2899 3441 2562 2813 3676 Plant intracellular Ras-group-related LRR protein (AHRD V3.3 *** A0A2R6PS30_ACTCH) AT5G05850 Solyc03g112280.3 86 39 38 30 10 13 6 5 18 22 13 31 61 48 81 C2 and GRAM domain-containing protein (AHRD V3.3 *** A0A1U8G6Q0_CAPAN) AT5G50170 Solyc03g112290.2 205 268 428 358 362 391 421 300 330 236 414 304 347 383 481 transcription termination factor (AHRD V3.3 *** AT5G63135.1) AT5G63135 Solyc03g112300.3 18 8 2 7 12 5 8 3 15 12 30 7 5 16 4 Octicosapeptide/phox/Bem1p domain kinase superfamily protein (AHRD V3.3 *-* A0A2K3MP92_TRIPR) Solyc03g112310.1 997 513 327 402 286 256 215 425 372 1031 492 469 216 298 235 Lectin receptor kinase (AHRD V3.3 *** B8XSM9_WHEAT) AT1G15530 Solyc03g112320.4 206 160 221 438 31 14 16 9 287 155 323 71 288 250 521 ferric reduction oxidase 8, mitochondrial (AHRD V3.3 *** A0A2I4E3B3_9ROSI) AT5G50160 Solyc03g112330.3 131 110 239 194 11 16 21 17 287 123 201 82 296 174 185 U-box domain-containing protein 52-like (AHRD V3.3 *** A0A2K3L2U5_TRIPR) Solyc03g112340.1 853 424 363 206 81 92 67 64 209 322 1101 379 319 269 602 RING/U-box superfamily protein (AHRD V3.3 *** A0A2H1ZED7_ARATH) AT5G27420 Solyc03g112350.4 1573 1252 961 1097 831 1037 1082 824 838 835 1011 849 1042 1102 1305 RNA helicase DEAD12 AT5G63120 Solyc03g112360.1 3297 6587 5117 4065 5116 5739 5189 5893 3656 3441 3413 4383 6889 5930 4056 60S ribosomal protein L27a (AHRD V3.3 *** A0A2G3CYL3_CAPCH) AT1G70600 Solyc03g112370.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc03g112380.1 337 242 250 331 255 279 249 235 194 258 231 224 395 223 242 Armadillo repeat only 1 protein (AHRD V3.3 *-* A0A2K3MYY7_TRIPR) Solyc03g112390.3 65 85 68 91 101 98 89 70 115 81 167 99 82 55 140 R2R3MYB transcription factor 86 Solyc03g112400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g112410.2 0 1 3 0 0 0 6 3 3 1 5 3 0 0 3 Histone deacetylase (AHRD V3.3 *** A0A1U8EWM8_CAPAN) Solyc03g112420.3 98 90 106 141 116 121 88 133 89 117 65 119 73 107 84 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1NNB9_ARTAN) AT1G64310 Solyc03g112425.1 50 22 44 45 38 35 26 21 27 19 28 37 23 33 25 Unknown protein Solyc03g112430.1 239 178 248 197 339 258 237 184 134 302 139 297 239 150 159 LOB domain-containing protein (AHRD V3.3 *** A0A2U1Q2L9_ARTAN) AT5G63090 Solyc03g112440.1 365 217 137 251 79 98 70 123 126 263 158 223 127 306 286 Oleosin (AHRD V3.3 *** A0A2G3A1E3_CAPAN) Solyc03g112450.4 1596 1634 1641 1564 1915 1813 1721 1794 1410 1465 1435 1564 1612 1632 1606 signal recognition particle receptor subunit beta-like (AHRD V3.3 *** A0A2I4DDJ1_9ROSI) AT5G05670 Solyc03g112460.3 70 179 317 300 355 405 265 360 222 167 234 389 131 261 149 Tryptophan aminotransferase-related protein 2 (AHRD V3.3 *** A0A2G2X8Z7_CAPBA) AT4G24670 Solyc03g112465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3DEI6_NOCCA) Solyc03g112490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g112500.4 10 0 1 7 13 2 6 2 16 1 13 6 1 3 0 Raffinose synthase (AHRD V3.3 *** G5DF09_9LAMI) AT5G40390 Solyc03g112510.2 237 193 235 245 186 187 188 184 192 145 181 225 225 250 234 D111/G-patch domain-containing protein (AHRD V3.3 *** A0A2U1QC79_ARTAN) AT4G34140 Solyc03g112520.3 1286 1272 1306 1108 1494 1255 1355 1322 1282 895 1458 1131 1339 1387 1492 FKBP12-interacting protein of 37 kDa (AHRD V3.3 *** A0A2G3A1B4_CAPAN) AT3G54170 Solyc03g112530.3 1327 1495 1050 755 843 772 737 844 868 630 725 738 2202 1743 1256 WD40 repeat-containing protein (AHRD V3.3 *** A0A2U1N904_ARTAN) AT5G52820 Solyc03g112540.4 86 244 163 181 513 451 483 529 321 172 183 333 150 308 117 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1Q346_ARTAN) AT5G50130 Solyc03g112550.3 278 368 240 396 572 528 539 654 263 228 242 407 197 255 241 kinetochore protein spc25 (AHRD V3.3 *** A0A2I4DXX8_9ROSI) AT3G48210 Solyc03g112560.4 315 256 296 425 431 346 484 434 300 440 267 373 282 335 368 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3A1G4_CAPAN) AT1G80550 Solyc03g112570.2 465 488 714 497 330 404 465 365 346 374 526 335 657 647 600 ribonucleoside-diphosphate reductase subunit beta (AHRD V3.3 *** AT5G50410.1) AT5G50410 Solyc03g112580.3 98 257 299 313 236 344 294 234 316 260 277 271 231 281 203 Receptor protein kinase, putative (AHRD V3.3 *** B9RAX9_RICCO) Solyc03g112590.4 5200 1351 1252 1175 791 792 855 728 1408 1416 1712 1194 1057 1443 3158 Cell division cycle protein 48-like protein (AHRD V3.3 *** A0A2G3CYA7_CAPCH) Solyc03g112600.4 454 273 394 364 301 400 283 278 255 234 367 237 425 397 386 JmjC domain (AHRD V3.3 *** A0A200RAY2_9MAGN),Pfam:PF13621 AT5G63080 Solyc03g112620.4 204 993 1572 838 1476 1482 1486 1272 1187 531 1190 926 839 703 731 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** F4I5H4_ARATH) AT5G50150 Solyc03g112630.3 1551 1569 2053 1923 2062 1838 1739 2027 1691 1438 1473 1872 2843 2141 2605 plant UBX domain-containing protein 10-like (AHRD V3.3 *** A0A2G2XZ29_CAPAN) Solyc03g112640.3 182 144 114 117 97 136 111 83 134 102 110 152 122 177 216 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1Q4D3_ARTAN) AT5G63060 Solyc03g112650.3 409 451 529 471 366 333 304 390 421 503 527 410 612 502 512 heme-binding protein 2-like (AHRD V3.3 *** A0A2I4G1E9_9ROSI) Solyc03g112660.3 4128 4775 4059 3844 4392 5085 4606 5160 5083 4059 4016 4334 4383 5121 4789 protein MODIFIER OF SNC1 1-like isoform X1 (AHRD V3.3 *** A0A2I4G1G1_9ROSI) AT4G24680 Solyc03g112670.3 659 890 675 727 970 940 1002 815 688 604 760 835 824 875 825 embryo defective 2759 (AHRD V3.3 *** AT5G63050.1) AT5G63050 Solyc03g112680.3 19 18 23 23 17 15 11 21 8 8 18 12 8 29 20 LRR receptor-like serine/threonine-protein kinase GSO1 (AHRD V3.3 *** A0A1U8G4M4_CAPAN) AT4G20140 Solyc03g112690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Histone-lysine N-methyltransferase (AHRD V3.3 *** A0A328EC95_9ASTE) Solyc03g112700.1 175 95 32 29 0 0 0 0 20 25 95 6 59 49 81 Herbivore elicitor-regulated 1 (AHRD V3.3 *** S5ZR43_NICAT) AT2G15760 Solyc03g112710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SKP1-like protein (AHRD V3.3 *** C3V9V9_CITMA) Solyc03g112720.4 594 395 614 499 442 507 473 358 374 442 464 480 425 383 329 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QZI1_9MAGN) Solyc03g112730.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cysteine-rich receptor-like protein kinase 42 (AHRD V3.3 *-* A0A2I4GEQ5_9ROSI) Solyc03g112735.1 3 1 4 2 0 3 3 9 6 0 0 0 0 0 0 Homeobox protein knotted-1-like 1 (AHRD V3.3 *-* A0A2G2YEI2_CAPAN) Solyc03g112740.2 0 5 0 2 0 3 1 4 0 0 0 0 0 5 0 Homeobox protein knotted-1-like 1 (AHRD V3.3 *-* A0A2G2YEI2_CAPAN) Solyc03g112750.4 46 108 102 126 119 120 118 119 105 59 96 68 108 132 102 protein TORNADO 1 (AHRD V3.3 *** A0A2I4DZR4_9ROSI) AT5G55540 Solyc03g150153.1 8 2 8 12 2 5 11 2 11 3 0 3 9 7 9 Unknown protein Solyc03g112760.3 307 504 376 644 755 768 730 708 798 379 379 311 350 310 692 transmembrane protein (AHRD V3.3 *** AT3G48200.1) AT3G48200 Solyc03g112770.3 964 696 1052 784 818 729 795 661 726 822 912 806 803 779 1065 Glutaredoxin (AHRD V3.3 *** I2FJT7_SOLTU) AT5G63030 Solyc03g112780.1 46 55 26 26 23 53 27 38 19 55 30 34 53 55 24 F-box protein (AHRD V3.3 *** A0A2G3DAV0_CAPCH) Solyc03g112790.3 39 184 155 135 273 198 213 225 96 80 124 139 116 145 130 Wall-associated receptor kinase galacturonan-binding domain (AHRD V3.3 *** A0A200RDH2_9MAGN) AT5G50290 Solyc03g112800.2 0 9 6 16 13 12 8 9 3 6 24 0 2 8 1 CASP-like protein (AHRD V3.3 *** A0A2G3CYC0_CAPCH) Solyc03g112810.3 262 228 277 298 240 251 286 226 241 237 284 269 247 295 360 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (AHRD V3.3 *** Q84K84_ARATH),Pfam:PF02466 AT5G63000 Solyc03g112820.4 1153 1296 1002 820 579 694 717 680 869 555 898 754 1395 1333 1171 U3 small nucleolar ribonucleoprotein protein MPP10 (AHRD V3.3 *** A0A2G2X924_CAPBA) AT5G66540 Solyc03g112830.4 949 387 362 339 263 290 324 308 309 449 344 300 265 381 306 PX domain-containing protein/DUF4206 domain-containing protein (AHRD V3.3 *** A0A1Q3AS02_CEPFO) AT3G48195 Solyc03g112840.2 30 30 69 51 26 27 29 11 39 28 55 18 17 34 48 transmembrane protein (AHRD V3.3 *** AT1G10660.4) AT5G62960 Solyc03g112850.3 2865 4225 4400 3476 3818 3855 4013 3662 2825 2696 3950 3184 5390 4538 4542 60S ribosomal protein L44 (AHRD V3.3 *** A0A2G3CYG5_CAPCH) AT3G23390 Solyc03g112860.3 247 245 362 403 245 268 331 251 335 308 399 257 255 241 423 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** A0A2U1LW40_ARTAN) Solyc03g112870.3 551 2784 1780 2163 3317 3104 3211 3786 2073 1879 1682 2263 2238 2275 1126 Phosphoenolpyruvate/phosphate translocator 1, chloroplastic (AHRD V3.3 *** A0A2G2X8M1_CAPBA) AT5G33320 Solyc03g112880.1 73 338 372 396 467 480 459 600 376 368 256 430 348 310 256 fasciclin-like arabinogalactan protein 4 (AHRD V3.3 *** A0A1U7WCV8_NICSY) AT3G46550 Solyc03g112890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor AT4G18770 Solyc03g112900.3 4098 3244 3065 2776 2770 2746 2620 2560 3235 2653 2786 2528 4036 3775 3889 Iron-sulfur cluster assembly scaffold protein IscU (AHRD V3.3 *** A0A2G7TDU8_9FLAO) AT4G22220 Solyc03g112910.3 2539 2292 2018 2244 1938 2101 2090 2274 2549 2520 2132 2305 2524 2338 1768 Pantothenate kinase 2 (AHRD V3.3 *** A0A0K9S3P1_SPIOL) AT4G32180 Solyc03g112920.1 379 698 696 968 1956 1889 2074 1891 987 597 1365 1256 733 575 532 protein SHOOT GRAVITROPISM 5-like (AHRD V3.3 *** A0A2I4F066_9ROSI) AT3G48550 Solyc03g112930.3 149 229 152 200 196 142 155 122 226 215 220 128 233 150 203 Dof zinc finger protein (AHRD V3.3 *** A0A2K3NDY2_TRIPR) AT5G62940 Solyc03g112950.4 1118 877 792 681 634 581 722 648 821 642 662 665 718 977 796 Serine/threonine-protein kinase ATM (AHRD V3.3 *** A0A2G3A1I9_CAPAN) Solyc03g112960.1 130 373 353 457 501 388 390 549 425 497 474 483 439 357 183 Pectinesterase (AHRD V3.3 *-* A0A200PZQ0_9MAGN) Solyc03g112970.1 29 30 44 25 38 42 32 27 27 34 5 15 39 34 32 pectinesterase 1 (AHRD V3.3 *** A0A2I4F4J2_9ROSI) Solyc03g112980.1 13 11 0 9 0 11 7 14 6 2 0 1 11 10 22 Unknown protein Solyc03g112990.1 1076 1723 1642 1547 2006 1590 1365 1937 1734 2132 1574 2196 1791 1802 1601 Plant invertase/pectin methylesterase inhibitor superfamily protein, putative (AHRD V3.3 *** A0A061FWA3_THECC) AT3G47670 Solyc03g112995.1 6 55 30 83 30 19 24 21 104 59 90 74 61 65 28 Transcription factor PRE5 (AHRD V3.3 *** A0A2G3CYH0_CAPCH) Solyc03g113000.3 699 629 691 594 553 517 598 596 669 553 551 552 717 731 851 RINT1-like protein MAG2 (AHRD V3.3 *** A0A2G2X8L8_CAPBA) AT3G47700 Solyc03g113010.3 491 396 433 356 315 402 340 323 391 322 554 272 267 386 426 F-box/kelch-repeat protein (AHRD V3.3 *** A0A2G3CYH7_CAPCH) AT1G74510 Solyc03g113020.3 860 1210 1335 1388 1517 1615 1686 1465 1194 1104 1405 1195 1239 1350 1194 Vacuolar protein sorting-associated protein 29 (AHRD V3.3 *** A0A1U8FXR4_CAPAN) AT3G47810 Solyc03g113030.4 490 694 999 835 1029 998 1065 1027 1150 823 982 1097 699 974 852 Aldose 1-epimerase (AHRD V3.3 *** A0A2G3CYH4_CAPCH) AT3G47800 Solyc03g113035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) Solyc03g113040.4 70 16 53 20 34 28 16 28 45 26 25 22 29 42 45 ABC transporter A family member 7 (AHRD V3.3 *** A0A2G3CYH9_CAPCH) AT3G47780 Solyc03g113050.1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 LAG1 longevity assurance-like protein 1 (AHRD V3.3 *** A0A2G2WRI1_CAPBA) Solyc03g113060.3 187 255 589 713 219 235 254 141 328 224 471 419 267 492 915 ABC transporter A family member 7 (AHRD V3.3 *** A0A2G2WRJ6_CAPBA) AT3G47780 Solyc03g113070.4 44 53 48 30 29 52 57 66 63 46 36 56 65 72 54 ABC transporter A family member 2 (AHRD V3.3 *** A0A2G3CYK0_CAPCH) AT3G47730 Solyc03g113090.3 172 910 571 619 1707 1580 1471 2123 961 790 681 1194 271 425 344 microtubule-associated futsch-like protein (AHRD V3.3 *** AT5G62550.1) AT5G62550 Solyc03g113100.3 2800 1913 1953 1975 2064 2231 2358 2104 1567 1870 1680 1586 2099 1814 1831 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QS73_9MAGN) Solyc03g113110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *-* A0A2I0XCI6_9ASPA) Solyc03g113120.4 21 16 14 38 24 34 14 28 42 3 7 30 26 22 15 WRKY transcription factor 73 AT5G15130 Solyc03g113130.3 63 45 128 34 49 30 56 68 39 122 241 35 160 74 34 plant cysteine oxidase 2-like (AHRD V3.3 *** A0A2G3A1M0_CAPAN) Solyc03g113140.3 1130 646 747 737 431 578 582 498 446 600 614 520 706 798 786 Nuclear ribonuclease Z (AHRD V3.3 *** A0A2G3CYI6_CAPCH) AT1G74700 Solyc03g113150.3 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 Pectate lyase (AHRD V3.3 *** A0A2G3CYI8_CAPCH) AT3G01270 Solyc03g113160.1 1 0 0 1 0 1 3 0 3 1 0 8 5 1 0 F-box domain (AHRD V3.3 *** A0A200QEL3_9MAGN) AT1G68960 Solyc03g113170.3 0 2 8 0 5 3 2 6 5 3 3 0 2 2 13 HSP20 domain-containing protein (AHRD V3.3 *** A0A1Q3C1C8_CEPFO) Solyc03g113180.3 36 21 108 43 43 42 42 22 37 40 101 19 16 62 86 18.2 kDa class I heat shock protein (AHRD V3.3 *-* A0A2G2VYJ5_CAPBA) Solyc03g113190.1 523 996 968 995 1157 1264 1152 1095 1127 570 921 845 1002 1150 963 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061FW49_THECC) AT1G74720 Solyc03g113200.1 0 2 10 0 0 1 1 0 1 0 0 0 0 0 0 protein PXR1 (AHRD V3.3 *-* XP_010319104.1) Solyc03g113210.3 139 65 188 284 6 8 8 3 63 82 123 25 45 84 51 Mitochondrial outer membrane protein porin (AHRD V3.3 *** A0A2K3N5U3_TRIPR) Solyc03g113220.3 2709 949 689 633 329 383 319 418 579 882 730 512 1319 997 722 Hypersensitive-induced response protein (AHRD V3.3 *** A6YGE4_CARPA) AT5G62740 Solyc03g113230.3 0 0 6 0 0 0 0 1 1 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** F4I672_ARATH) Solyc03g113240.3 434 722 807 606 1013 932 1005 795 769 585 887 636 484 545 648 Transmembrane protein, putative (DUF1118) (AHRD V3.3 *** Q94F10_ARATH) AT1G74730 Solyc03g113250.4 14 47 49 30 18 9 7 3 96 28 93 33 3 36 12 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AT47_ARATH) Solyc03g113260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g113270.3 5714 2305 2718 4521 1011 1088 926 931 2152 2620 2351 1274 3644 2990 7309 LEVAHOX1G L.esculentum homeobox Solyc03g113280.3 110 248 266 247 388 271 337 391 263 253 183 206 281 233 147 Integral membrane HPP family protein (AHRD V3.3 *** A0A2U1NK12_ARTAN) AT3G47980 Solyc03g113290.2 253 242 261 133 144 135 85 103 93 119 131 217 303 220 120 Unknown protein Solyc03g113300.4 69 137 153 118 47 42 59 67 98 78 120 76 161 140 152 Short-chain dehydrogenase reductase 5 (AHRD V3.3 *-* A0A2G3A1M8_CAPAN) Solyc03g113310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g113320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g113330.3 252 426 357 370 433 428 358 412 347 337 239 401 389 337 373 Nodulin-like / Major Facilitator Superfamily protein (AHRD V3.3 *** A0A2U1M3G7_ARTAN) Solyc03g113340.3 226 153 155 164 323 354 297 271 117 150 150 183 130 151 119 Nodulin-like / Major Facilitator Superfamily protein (AHRD V3.3 *** A0A2U1M3G7_ARTAN) AT1G74780 Solyc03g113350.3 418 269 166 323 113 140 209 165 320 271 235 147 311 160 390 Zinc finger protein (AHRD V3.3 *** A0A200QF78_9MAGN) AT1G74770 Solyc03g113360.4 0 6 2 6 55 47 41 29 2 4 18 7 1 6 0 LOB domain-containing protein 22 (AHRD V3.3 *** A0A2G3AW69_CAPCH) AT3G47870 Solyc03g113370.3 584 524 529 442 552 548 574 617 549 584 425 504 614 699 416 Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *** A0A2K3NQ17_TRIPR) AT3G47910 Solyc03g113380.4 1207 977 1043 754 477 500 500 443 1117 1327 1057 997 1355 850 800 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8FWS7_CAPAN) AT1G74750 Solyc03g113390.3 2215 1179 1088 595 309 297 316 318 719 1037 740 471 1334 892 866 Calcium-dependent protein kinase (AHRD V3.3 *** E5GBE9_CUCME) AT1G18890 Solyc03g113400.4 3304 3029 2716 2766 2207 2290 1985 2379 2616 3241 2584 2453 4432 2761 3105 TOMLHA1 H+-ATPase AT5G62670 Solyc03g113410.2 1 5 2 4 0 3 4 2 1 1 1 0 7 6 9 Auxin response factor (AHRD V3.3 *-* A0A2G3BTJ2_CAPCH) Solyc03g113420.4 694 540 302 403 120 167 244 137 478 962 477 292 1627 752 902 Protein NRT1/ PTR FAMILY 2.9 (AHRD V3.3 *** A0A2G2WRJ5_CAPBA) Solyc03g113430.3 47 73 145 205 86 90 98 80 348 208 357 70 233 120 107 Protein NRT1/ PTR FAMILY 2.9 (AHRD V3.3 *** A0A2G2WRK6_CAPBA) AT5G62680 Solyc03g113440.3 3 5 3 22 62 30 39 26 11 4 10 13 8 24 25 Protein NRT1/ PTR FAMILY 2.8 (AHRD V3.3 *** A0A2G2WRK5_CAPBA) AT5G28470 Solyc03g113450.4 525 1352 1243 1194 2379 2025 2033 2542 1613 788 1190 2023 1001 1195 680 Receptor-like protein kinase (AHRD V3.3 *** Q9FM23_ARATH) AT5G62710 Solyc03g113460.1 150 158 184 159 140 158 211 141 314 215 228 275 269 216 261 Short-chain dehydrogenase reductase 4 (AHRD V3.3 *** A0A2G2WRF5_CAPBA),Pfam:PF13561 Solyc03g113470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HIPL2 protein (AHRD V3.3 *** A0A2G3A1N3_CAPAN) Solyc03g113480.1 13 11 11 33 58 19 16 26 32 27 28 18 19 18 26 extensin-like protein (AHRD V3.3 *** AT1G77400.1) AT1G77400 Solyc03g113490.3 429 361 408 304 174 139 116 110 258 364 241 139 668 274 169 HIPL2 protein (AHRD V3.3 *** A0A2G3A1K5_CAPAN) AT1G74790 Solyc03g113500.4 1482 1649 1590 1770 1619 1593 1628 2372 1515 1525 1365 1516 1608 1716 1389 DDT domain-containing protein (AHRD V3.3 *** A0A1Q3BG21_CEPFO) AT1G18950 Solyc03g113510.2 132 64 61 39 41 69 33 47 50 60 65 76 59 58 106 hypothetical protein (AHRD V3.3 *** AT1G16770.1) AT1G16770 Solyc03g113520.3 265 289 307 221 245 208 223 203 192 205 213 232 262 208 194 Galactosyltransferase family protein (AHRD V3.3 *** A0A2U1KC25_ARTAN) AT5G62620 Solyc03g113530.3 0 0 0 0 0 0 0 0 0 2 1 2 0 1 0 MYB transcription factor (AHRD V3.3 *-* B4FNX4_MAIZE) Solyc03g113540.3 249 238 177 407 350 387 290 393 221 220 232 311 245 242 95 Dynein light chain (AHRD V3.3 *-* Q4W5W8_VICFA) Solyc03g113550.2 50 76 100 95 125 90 111 130 66 89 41 103 44 89 15 Transcription factor bHLH79 (AHRD V3.3 *-* A0A2G3AW72_CAPCH) Solyc03g113560.4 140 286 335 314 370 488 441 400 278 224 359 326 176 237 123 Transcription factor bHLH79 (AHRD V3.3 *-* A0A2G3A1L3_CAPAN) Solyc03g113570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Germin (AHRD V3.3 *** A0A200QNF0_9MAGN) AT1G18980 Solyc03g113580.1 1 9 2 6 1 0 1 0 8 2 0 1 1 5 1 Germin (AHRD V3.3 *** A0A200QNF0_9MAGN) AT1G18980 Solyc03g113590.3 1057 1162 1053 1199 1219 1401 1168 1192 992 1279 998 1081 1022 1073 876 5-formyltetrahydrofolate cycloligase AT5G13050 Solyc03g113600.4 0 0 5 2 4 0 0 0 6 3 0 1 4 0 0 Myosin-binding protein 2 (AHRD V3.3 *** A0A2G2WRI3_CAPBA) AT1G18990 Solyc03g113610.4 654 692 616 505 829 645 569 743 576 688 604 879 795 782 712 Polynucleotide 5'-hydroxyl-kinase NOL9 (AHRD V3.3 *** A0A2G2WRJ2_CAPBA) AT5G11010 Solyc03g113620.3 8798 2705 2321 3144 1581 1436 1648 1372 2196 3140 4635 1263 1672 2392 6948 Transcription factor MYB1R1 (AHRD V3.3 *** A0A2G2WRC4_CAPBA) AT1G19000 Solyc03g113630.3 1505 818 809 716 526 609 579 670 634 557 659 607 492 880 891 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2WRC1_CAPBA) AT1G74850 Solyc03g113640.4 1654 1311 1374 1175 1116 1199 1320 1050 1213 1168 1245 1168 1181 1371 1464 Putative serine esterase family protein (AHRD V3.3 *** AT1G58350.4) AT1G58350 Solyc03g113650.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g113660.4 326 296 287 268 293 313 290 297 423 228 312 278 348 364 389 hypothetical protein (AHRD V3.3 --* AT1G19010.2) Solyc03g113670.4 140 148 198 175 219 249 230 145 155 83 151 163 206 196 327 BnaA06g17060D protein (AHRD V3.3 *** A0A078GFP7_BRANA) Solyc03g113680.4 761 1105 1160 1732 937 906 946 1130 1703 1948 2058 1141 1033 1086 1679 Microtubule-associated protein TORTIFOLIA1 (AHRD V3.3 *** A0A2K3N0J0_TRIPR) AT5G62580 Solyc03g113690.1 35 42 19 39 0 0 0 3 2 28 6 0 12 61 138 ABC transporter G family member 23 (AHRD V3.3 *** A0A2G2WRI2_CAPBA) AT5G19410 Solyc03g113700.3 1136 729 705 567 559 642 599 510 679 896 861 624 587 654 844 General negative regulator of transcription subunit 4 (AHRD V3.3 *** A0A1J3F722_NOCCA) AT3G48070 Solyc03g113710.4 5 2 0 8 1 4 4 2 8 12 1 6 8 6 0 Formin-like protein (AHRD V3.3 *** A0A2G3AWB8_CAPCH) Solyc03g113720.3 90 210 244 288 189 216 204 163 429 104 169 154 212 325 247 Two-component response regulator ARR3 (AHRD V3.3 *** A0A2G2Y6S6_CAPAN) AT1G74890 Solyc03g113730.3 3826 1701 1962 2014 2598 2720 2406 2545 2331 2651 2492 2282 1310 1235 1626 B12D protein (AHRD V3.3 *** Q9XHD5_IPOBA) AT3G48140 Solyc03g113740.4 750 555 358 339 426 392 376 491 348 400 276 468 499 489 370 Anaphase-promoting complex subunit 8 (AHRD V3.3 *** A0A2G3AWA1_CAPCH) AT3G48150 Solyc03g113750.3 262 220 186 324 173 162 238 209 160 277 157 274 225 267 130 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1QGJ0_ARTAN) AT1G74900 Solyc03g113760.3 21 277 364 396 505 456 456 447 245 149 328 368 88 224 172 E2F transcription factor-like E2FE (AHRD V3.3 *** A0A1U8FXH9_CAPAN) AT3G48160 Solyc03g113770.3 780 385 408 386 322 272 321 312 429 425 389 346 454 454 625 NAD(P)H-hydrate epimerase (AHRD V3.3 *** A0A1U8G4A3_CAPAN) Solyc03g113780.3 508 822 887 884 1132 1097 975 1228 1134 754 738 1108 765 968 807 NAD(P)H-hydrate epimerase (AHRD V3.3 *** A0A2G2VFG5_CAPBA) AT5G49970 Solyc03g113790.4 1160 1422 1100 1414 2198 1730 1875 2116 1827 1668 1145 1716 1531 1320 1020 Glucose-1-phosphate adenylyltransferase family protein (AHRD V3.3 *** A0A2U1PR08_ARTAN) AT1G74910 Solyc03g113800.3 2606 3644 2563 3206 3722 3009 3056 3843 4910 3421 3171 3837 3970 3981 3064 Aldehyde dehydrogenase (AHRD V3.3 *** A0A0K9R405_SPIOL) AT1G74920 Solyc03g113810.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase (AHRD V3.3 -** AT3G48180.1) AT3G48180 Solyc03g113820.3 6 1 0 0 0 0 1 1 0 0 1 0 0 3 0 Alpha-N-acetylglucosaminidase (AHRD V3.3 *** A0A200QV42_9MAGN) Solyc03g113825.1 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 Bax inhibitor-1 like (AHRD V3.3 *-* Q8LAY4_ARATH) Solyc03g113840.3 3 0 0 0 0 0 0 0 0 0 0 0 2 1 2 Alpha-N-acetylglucosaminidase (AHRD V3.3 *-* A0A200QV42_9MAGN) Solyc03g150154.1 16 5 1 8 1 3 0 0 3 9 2 2 10 10 14 Alpha-n-acetylglucosaminidase-like protein (AHRD V3.3 *-* A0A2K3NS60_TRIPR) Solyc03g113850.1 122 76 63 62 36 28 24 27 55 56 28 34 69 102 391 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1QGB4_ARTAN) AT5G50120 Solyc03g113860.2 42 53 77 50 72 60 75 76 60 39 105 69 101 97 52 Ribosomal RNA small subunit methyltransferase G-like protein (AHRD V3.3 *** A0A2K3PF28_TRIPR) AT5G50110 Solyc03g113870.1 1701 980 1010 644 841 732 664 779 910 1041 790 833 918 870 562 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3AWB5_CAPCH) AT5G65200 Solyc03g113880.4 281 426 394 403 507 512 532 544 426 437 343 598 486 406 284 DNA glycosylase superfamily protein (AHRD V3.3 *** A0A2U1LXN0_ARTAN) AT3G47830 Solyc03g113890.1 8 4 23 28 9 18 47 21 9 16 4 8 10 15 20 Zinc finger protein GIS (AHRD V3.3 *** A0A2G3AWD2_CAPCH) Solyc03g113900.4 51 59 86 123 172 113 136 107 60 56 128 78 135 149 95 alpha-1,2-Mannosidase (AHRD V3.3 *** A0A1U8G656_CAPAN) AT1G27520 Solyc03g113910.3 4102 5075 7254 3814 1812 1642 1842 1545 2702 2202 5434 2087 4004 3071 3363 Gibberellin-regulated protein 14 (AHRD V3.3 *** A0A2G3AWC5_CAPCH) Solyc03g113920.4 730 868 948 1491 1056 1142 1364 1024 722 831 793 697 1060 866 647 Calmodulin binding protein (AHRD V3.3 *** A0A2K3MP79_TRIPR) AT5G62570 Solyc03g113930.3 1 0 0 1 0 0 0 0 0 0 0 0 3 0 0 22.0 kDa class IV heat shock protein (AHRD V3.3 *** A0A2G3ATG3_CAPCH) Solyc03g113940.4 154 55 36 44 0 0 1 0 12 22 43 8 77 77 42 Calmodulin binding protein-like (AHRD V3.3 *-* A0A200QLB3_9MAGN) Solyc03g113950.4 1580 599 1091 1278 82 69 111 57 842 621 1221 396 830 998 1711 Calmodulin binding protein (AHRD V3.3 *-* A0A2K3MP79_TRIPR) Solyc03g113960.4 423 316 395 303 40 35 26 16 266 228 348 141 550 298 372 Calmodulin binding protein-like (AHRD V3.3 *-* A0A200QLB3_9MAGN) Solyc03g113970.4 997 563 698 504 345 457 459 415 480 611 696 531 519 431 306 Calmodulin binding protein-like (AHRD V3.3 *** A0A200QLB3_9MAGN) Solyc03g113980.3 152 98 240 126 28 32 34 25 86 178 495 50 121 151 215 Calmodulin binding protein-like (AHRD V3.3 *** A0A200RE12_9MAGN) Solyc03g113990.3 683 366 114 276 171 184 158 131 271 292 178 170 318 273 396 Thiol-disulfide oxidoreductase DCC (AHRD V3.3 *** A0A2U1Q887_ARTAN) AT5G50100 Solyc03g114000.3 78 128 149 127 29 31 22 13 144 107 337 37 90 138 503 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3BSR2_CEPFO) Solyc03g114010.3 23 34 24 36 40 40 56 38 42 33 42 30 48 56 29 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1Q882_ARTAN) Solyc03g114020.3 3467 1852 2076 1765 1208 1261 1172 901 1214 1247 2385 827 1840 1613 2149 D-ribose-binding periplasmic protein (AHRD V3.3 *** A0A2P5CJ45_PARAD) Solyc03g114030.3 900 975 1206 1215 604 614 652 698 1080 1116 1517 795 1062 937 1952 PermeaseI-like protein AT5G62890 Solyc03g114033.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Unknown protein Solyc03g114037.1 0 1 10 2 3 3 4 1 0 7 0 4 0 0 0 Unknown protein Solyc03g114040.3 29 91 89 134 138 158 174 105 75 50 43 109 64 71 48 Protein PRD1 (AHRD V3.3 *** A0A2G3CYP2_CAPCH) AT4G14180 Solyc03g114050.3 963 977 952 882 809 1010 825 747 640 691 822 678 1287 1037 1183 39S ribosomal protein L47, mitochondrial (AHRD V3.3 *** A0A2I4FJ69_9ROSI) AT1G07830 Solyc03g114060.3 4473 3872 3294 3620 3328 3482 3671 3821 3755 3862 3571 3569 3177 4195 3134 Bromo adjacent homology (BAH) domain (AHRD V3.3 *** A0A200R0M3_9MAGN) AT3G48050 Solyc03g114070.3 578 657 586 652 604 711 578 784 517 626 546 774 616 606 488 Rac-like GTP binding protein (AHRD V3.3 *** Q9S821_PHYPA) AT5G62880 Solyc03g114080.2 0 0 0 1 0 0 2 4 0 0 1 0 0 3 3 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A061G0X7_THECC) Solyc03g114090.1 25 13 41 21 18 31 19 24 15 15 46 23 24 17 15 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1N3Q0_ARTAN) Solyc03g114100.1 342 230 311 351 561 418 425 534 378 580 398 429 289 319 422 hypothetical protein (AHRD V3.3 *** AT1G52720.1) AT1G52720 Solyc03g114110.4 1328 1031 1208 1889 1066 1381 1577 1070 1242 1081 1678 1040 1161 1346 1803 Cyclic nucleotide-gated channel 16 (AHRD V3.3 *** A0A2U1QP75_ARTAN) AT3G48010 Solyc03g114120.3 3286 2393 2516 2664 2496 2667 2442 2688 2120 2882 2930 3473 2081 1943 1781 Ribonuclease 3 (AHRD V3.3 *** A0A1J3HMP1_NOCCA) AT1G24450 Solyc03g114130.1 112 66 130 92 34 71 58 69 103 86 164 84 76 84 44 NHL domain protein (AHRD V3.3 *** AT5G14895.1) AT5G62865 Solyc03g114140.3 1963 1166 1090 1080 984 1176 981 1165 1289 1736 1304 1492 1055 1272 1236 RNA-dependent RNA polymerase2 AT4G11130 Solyc03g114150.3 4479 2540 2581 2733 2358 1754 1754 2376 3665 3447 2602 3060 3254 3220 3536 Aldehyde dehydrogenase (AHRD V3.3 *** A0A2U1M8J4_ARTAN) AT3G48000 Solyc03g114160.1 135 50 36 34 0 5 5 0 30 14 42 37 56 73 262 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VA42_CAPBA) AT1G60190 Solyc03g114170.3 1213 1998 3736 3580 3598 4050 3841 2567 2160 1754 3128 2442 2773 3311 3411 Protein DELETION OF SUV3 SUPPRESSOR 1(I) (AHRD V3.3 *** SEM11_ARATH) AT5G45010 Solyc03g114175.1 1130 863 1053 713 565 555 600 586 740 1194 990 504 917 832 545 Glycosyltransferase (AHRD V3.3 *** A0A2U1M9M1_ARTAN) Solyc03g114190.1 9 4 0 4 0 0 0 0 1 1 0 0 10 0 1 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1Q188_ARTAN) Solyc03g114200.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVG6_SOLTU) AT5G62850 Solyc03g114210.3 155 253 370 271 370 414 399 351 349 303 452 314 271 274 277 Protein kinase (AHRD V3.3 *** Q9FGB1_ARATH) AT5G50000 Solyc03g114220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein (AHRD V3.3 *-* A0A2U1PVE1_ARTAN) Solyc03g114230.2 1 13 3 0 0 0 0 0 0 12 2 0 8 13 17 bHLH transcription factor 082 Solyc03g114233.1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1KIU4_ARTAN) Solyc03g114237.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1KIU4_ARTAN) Solyc03g114240.4 248 1268 1370 1361 2166 2072 1782 2891 1648 846 915 1527 1124 1546 580 BURP domain (AHRD V3.3 *** A0A200QH65_9MAGN) Solyc03g114250.4 771 876 747 1311 939 838 965 967 932 944 1022 985 786 905 926 Phosphoglycerate mutase family protein (AHRD V3.3 *** A0A2U1L2I8_ARTAN) AT5G62840 Solyc03g114260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein (AHRD V3.3 *-* A0A2U1NIJ0_ARTAN) Solyc03g114270.1 0 2 0 3 4 1 10 0 0 1 1 3 0 0 0 hypothetical protein (AHRD V3.3 *** AT1G09520.1) AT3G17460 Solyc03g114280.3 602 610 1207 755 869 980 921 895 742 698 833 904 677 835 768 RING/U-box superfamily protein (AHRD V3.3 *-* Q93YQ5_ARATH) AT3G47990 Solyc03g114290.4 604 712 894 742 1127 942 910 894 730 799 728 799 1063 877 1191 CASP-like protein (AHRD V3.3 *** A0A2G3CYS8_CAPCH) AT2G36330 Solyc03g114300.4 822 597 537 621 571 512 532 558 563 643 386 599 652 658 420 4-hydroxybenzoate polyprenyltransferase, mitochondrial (AHRD V3.3 *** A0A2G2WRH2_CAPBA) AT4G23660 Solyc03g114310.3 132 350 212 489 319 413 413 442 497 312 415 424 421 205 279 MAP kinase kinase kinase 28 Solyc03g114320.4 383 310 320 281 300 251 255 260 399 344 405 270 318 273 274 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* A0A2U1P231_ARTAN) Solyc03g114330.3 289 255 364 313 194 160 179 207 282 312 235 287 327 334 288 Peroxisomal membrane protein PEX14 (AHRD V3.3 *** A0A2G2ZCJ2_CAPAN) AT5G62810 Solyc03g114340.3 1015 1199 843 1084 1548 1389 1401 1495 1361 1364 1131 1365 1016 919 1112 1-deoxy-D-xylulose-5-phosphate reductoisomerase AT5G62790 Solyc03g114350.1 71 110 37 62 28 64 34 40 77 40 65 23 137 47 53 DUF1645 family protein (AHRD V3.3 *** G7J5G5_MEDTR) Solyc03g114360.4 293 177 328 435 52 83 82 31 118 155 270 76 195 276 635 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A2I4EPD4_9ROSI) AT5G62520 Solyc03g114370.4 2619 3141 2627 1837 2199 2315 2344 2024 1634 1419 1948 1929 3518 3148 2869 RNA helicase DEAD13 AT3G18600 Solyc03g114380.4 201 834 774 876 1688 1820 1724 2024 1010 571 761 1230 279 692 399 Kinesin-like protein (AHRD V3.3 *** A0A2G3CYT4_CAPCH) AT1G18550 Solyc03g114390.1 327 443 485 349 343 441 345 437 518 281 609 371 476 416 518 Protein MIZU-KUSSEI 1 (AHRD V3.3 *** A0A1U8GFV0_CAPAN) AT5G23100 Solyc03g114400.3 719 564 421 560 539 543 546 566 485 715 462 646 409 458 497 Nuclear factor Y, subunit B13 (AHRD V3.3 *** F4KBG0_ARATH) AT5G08190 Solyc03g114410.3 1569 1143 1089 1120 1096 1205 1230 1130 1309 955 1237 1127 915 1287 1193 G patch domain-containing protein TGH (AHRD V3.3 *** A0A1J3DWV0_NOCCA) AT5G23080 Solyc03g114420.1 0 1 13 12 0 0 0 2 4 4 5 0 1 3 5 Calmodulin (AHRD V3.3 *** B6SJJ2_MAIZE) Solyc03g114430.1 17 8 34 15 11 15 19 23 17 11 11 12 17 30 24 transmembrane protein (AHRD V3.3 *-* AT1G74055.1) AT1G74055 Solyc03g114440.1 4 1 3 1 0 3 1 1 1 0 0 0 3 4 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2YW81_CAPAN) Solyc03g114450.3 723 1552 532 1216 2438 2063 1991 2096 1168 932 500 964 1031 556 562 Calcium sensing receptor, chloroplastic (AHRD V3.3 *** A0A2G2WRE3_CAPBA) AT5G23060 Solyc03g114460.3 478 906 581 722 793 845 871 867 1724 977 686 1206 653 708 671 Acetyl-coenzyme A synthetase (AHRD V3.3 *** A0A2S4Q6W4_CITFR) AT5G23050 Solyc03g114470.2 1455 1753 1685 1766 1882 1731 1806 1641 1405 1346 1408 1547 1617 1645 1518 Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic (AHRD V3.3 *** A0A2G2WR89_CAPBA) AT5G23040 Solyc03g114480.4 99 44 27 46 10 10 5 10 39 39 41 15 90 76 36 Tetraspanin (AHRD V3.3 *-* A0A200Q8V3_9MAGN) Solyc03g114490.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Senescence-associated protein (AHRD V3.3 --* A0A2K3LFK9_TRIPR) Solyc03g114500.4 933 1441 1353 1402 1851 1480 1357 1981 1705 2117 1365 1678 1426 1585 1387 Enolase (AHRD V3.3 *** A0A2G2WR88_CAPBA) AT1G74030 Solyc03g114510.4 932 590 1104 977 904 1014 988 851 880 869 909 946 613 790 1050 Plant cysteine oxidase (AHRD V3.3 *** A0A2R6PDC8_ACTCH) AT1G18490 Solyc03g114520.3 86 341 368 341 464 430 555 439 285 241 284 441 228 339 209 Centromere protein Mis12 (AHRD V3.3 *** A0A200QPW2_9MAGN) AT5G35520 Solyc03g114530.4 24 181 81 43 256 334 288 304 257 159 92 94 84 59 15 Strictosidine synthase (AHRD V3.3 *** A0A346A6F4_GELSE) AT1G74000 Solyc03g114540.2 10 7 0 0 8 6 2 2 0 1 1 0 8 6 5 Strictosidine synthase family protein (AHRD V3.3 *** D7LVM7_ARALL) AT1G74000 Solyc03g114550.2 0 0 0 0 0 0 3 0 1 0 0 1 0 0 0 Strictosidine synthase family protein (AHRD V3.3 *** D7LVM7_ARALL) AT1G74000 Solyc03g114560.2 265 690 485 336 1160 1172 741 1080 1676 948 1142 1009 691 373 152 Strictosidine synthase family protein (AHRD V3.3 *** D7LVM7_ARALL) AT1G74000 Solyc03g114580.4 1050 429 459 496 200 210 274 219 629 545 469 573 606 803 678 Uridine kinase (AHRD V3.3 *** A0A200QPY2_9MAGN) AT1G73980 Solyc03g114590.3 383 346 536 311 351 304 251 302 331 438 564 298 504 417 455 Protein kinase domain (AHRD V3.3 *** A0A200QQM3_9MAGN) AT5G08160 Solyc03g114600.4 55 27 25 22 7 5 8 6 10 14 40 8 5 29 64 Alternaria stem canker resistance Solyc03g114610.1 0 0 0 0 0 0 5 0 0 0 0 2 0 0 0 Unknown protein Solyc03g114620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein GLUTAMINE DUMPER 4-like (AHRD V3.3 *** A0A2I4EBB2_9ROSI) Solyc03g114640.4 460 356 643 657 397 474 490 471 511 461 559 608 323 548 753 Signal peptide peptidase (AHRD V3.3 *** A0A2U1MQA9_ARTAN) AT1G73990 Solyc03g114650.3 2 9 21 6 16 5 24 11 7 13 0 11 0 2 8 Serine protease SPPA, chloroplastic (AHRD V3.3 *-* A0A2G2WR63_CAPBA) Solyc03g114660.1 395 327 234 186 300 217 242 261 294 329 222 281 252 246 208 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A1V3_CAPAN) AT1G18485 Solyc03g114670.4 472 681 724 692 776 1042 907 654 548 466 813 774 710 739 827 Unknown protein Solyc03g114680.3 799 653 497 529 491 579 527 545 539 686 611 598 577 444 626 RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) AT5G60820 Solyc03g114690.4 91 958 967 788 1421 1396 1367 1399 1081 643 864 1094 650 1240 299 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1KSI2_ARTAN) AT3G42660 Solyc03g114700.2 22 7 21 8 2 6 0 2 3 4 15 10 2 10 78 Unknown protein Solyc03g114705.1 1 3 1 1 0 0 0 0 1 1 5 0 4 0 5 Unknown protein Solyc03g114710.4 561 880 909 610 534 377 247 462 593 1035 759 649 1277 723 618 Glycosyltransferase (AHRD V3.3 *** A0A328DB01_9ASTE) AT1G73880 Solyc03g114720.3 2114 2319 1795 2442 2876 2987 2949 2678 2138 2026 2451 1988 2258 2188 2669 bHLH transcription factor 023 AT5G08130 Solyc03g114730.3 933 1846 2126 2236 2394 2725 2601 2024 2790 1794 2798 1861 1884 2089 3502 O-fucosyltransferase (AHRD V3.3 *** A0A2P5EBU6_TREOI) AT5G15740 Solyc03g114740.4 109 128 91 131 193 166 214 154 175 142 138 117 118 149 83 BSD domain-containing protein (AHRD V3.3 *** A0A2U1LI52_ARTAN) AT1G69030 Solyc03g114750.3 15 48 88 104 20 25 17 21 51 33 117 43 32 36 50 18S pre-ribosomal assembly protein gar2-like protein (AHRD V3.3 --* NP_178475.2) AT1G13650 Solyc03g114760.3 166 680 701 628 956 808 909 1021 691 496 558 745 555 580 454 Protein MICROTUBULE BINDING PROTEIN 2C (AHRD V3.3 *** MBP2C_TOBAC) AT5G08120 Solyc03g114770.3 2 15 6 25 4 7 7 13 20 10 16 8 3 15 12 protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE (AHRD V3.3 *** A0A2I4DYA7_9ROSI) AT5G60880 Solyc03g114780.3 1081 694 524 613 373 474 399 340 540 421 432 393 790 779 656 RNA helicase DEAH-box9 AT5G08110 Solyc03g114790.3 817 602 512 597 365 306 423 324 369 391 402 343 486 599 613 Isoaspartyl peptidase/L-asparaginase (AHRD V3.3 *** A0A2G2WQU4_CAPBA) AT5G08100 Solyc03g114800.1 75 1902 1001 1336 2257 1465 1292 1905 2157 849 1202 1398 754 1204 1151 Sulfotransferase (AHRD V3.3 *** A0A2G3CYQ4_CAPCH) Solyc03g114810.3 405 624 717 659 639 628 645 640 740 570 669 560 615 685 649 Hexosyltransferase (AHRD V3.3 *** A0A2G3A1X0_CAPAN) AT1G18580 Solyc03g114820.3 29 48 38 32 111 81 59 81 72 39 44 21 70 58 85 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** Q9M9P7_ARATH) AT3G03290 Solyc03g114830.3 2270 1890 2182 1704 2949 2363 2353 2468 2796 2153 4155 2982 2067 1682 2784 FRUITFULL-like MADS-box 2 AT5G60910 Solyc03g114840.3 1985 994 1267 881 458 580 358 402 317 778 368 766 92 574 309 MADS-box protein 1 AT2G03710 Solyc03g114850.4 8881 6869 6333 6415 10172 9689 10480 10913 9179 9650 9167 9327 6815 5957 4637 Squamosa promoter binding protein 6a AT1G69170 Solyc03g114860.4 1613 5115 5277 6360 8193 7131 7132 7098 4580 6913 6267 6575 3685 4636 5091 alpha-1,4-glucan-protein synthase [UDP-forming] 2-like (AHRD V3.3 *** A0A2G3A1X9_CAPAN) Solyc03g114870.1 0 4 0 0 0 0 5 3 1 1 0 3 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *** A0A2U1M943_ARTAN) Solyc03g114880.3 60 41 29 20 14 7 7 9 10 35 35 11 91 13 35 COBRA-like protein (AHRD V3.3 *** A0A2G3A1W9_CAPAN) Solyc03g114890.4 1136 1285 1977 1244 667 647 601 541 1040 2934 1843 575 3738 1474 754 COBRA-like protein (AHRD V3.3 *** K4BKZ1_SOLLC) Solyc03g114900.3 84 54 250 92 37 37 33 23 58 88 192 29 206 83 290 COBRA-like protein (AHRD V3.3 *** K4BKZ2_SOLLC) Solyc03g114910.4 6 17 82 49 33 28 29 20 19 33 19 85 13 48 8 COBRA-like protein (AHRD V3.3 *** K4BKZ3_SOLLC) Solyc03g114915.1 1 0 0 0 0 0 0 1 1 0 0 1 2 0 0 Unknown protein Solyc03g114920.1 1450 2455 1833 2227 2043 1910 1867 2061 1973 1946 1444 2010 2161 2327 1601 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QVV9_9MAGN) AT5G60960 Solyc03g114930.3 103 514 623 562 631 732 856 745 505 356 611 455 318 426 599 PsbP-like protein 1, chloroplastic (AHRD V3.3 *** A0A2G3A242_CAPAN) AT3G55330 Solyc03g114940.3 2356 3103 3485 2491 5961 5306 4484 6921 4226 4002 2595 5706 3061 3151 1636 Cytochrome P450 (AHRD V3.3 *** A0A200PRH8_9MAGN) AT1G74110 Solyc03g114950.2 1983 1958 1198 1219 979 966 977 1167 1517 2575 1294 1265 6462 1625 1599 ABC transporter B family member 27 (AHRD V3.3 *** A0A1U8FW31_CAPAN) AT5G39040 Solyc03g114960.4 1035 1570 1250 1426 1809 1890 2076 2019 1719 1253 1047 1517 1597 1596 1077 Galactose oxidase/kelch repeat superfamily protein (AHRD V3.3 *** A0A1P8ATP8_ARATH) AT1G18610 Solyc03g114970.3 1190 1590 2679 2047 2518 2639 3024 2119 2343 1812 2973 2526 1861 1879 2310 Protein SPIRAL1 (AHRD V3.3 *** A0A2G3A261_CAPAN) Solyc03g114980.4 137 143 58 119 142 85 94 145 139 122 86 130 70 118 42 Unknown protein Solyc03g114990.2 997 988 964 1105 884 1135 1142 896 930 785 1342 908 907 955 1005 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *-* A0A1I9LMI0_ARATH) Solyc03g115000.3 900 1109 1166 1091 1177 1312 1196 1315 1981 1061 1371 1109 1137 1273 1269 protein LONGIFOLIA 1-like (AHRD V3.3 *** A0A2I4EZQ4_9ROSI) AT1G74160 Solyc03g115010.3 107 49 143 89 72 73 63 56 65 60 86 89 48 103 25 TCP transcription factor 4 AT5G60970 Solyc03g115020.3 1898 973 1066 1235 1056 1070 870 832 1064 1183 1083 918 660 661 1532 Wiskott-aldrich syndrome family protein, putative (DUF1118) (AHRD V3.3 *** Q9SD79_ARATH) AT5G08050 Solyc03g150155.1 1633 3465 3569 2791 3445 3118 3078 2834 1828 1503 2479 2340 3961 3245 3021 Mitochondrial import receptor subunit TOM5-like protein (AHRD V3.3 *-* A0A1U8FW14_CAPAN) Solyc03g115040.4 28 25 44 26 4 20 13 18 37 66 26 20 52 35 12 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1KXX4_ARTAN) Solyc03g115050.3 44 1351 1400 1210 1872 1742 1621 1935 1174 654 801 1524 553 1259 414 Replication protein A subunit (AHRD V3.3 *** A0A1U8FVY4_CAPAN) AT5G08020 Solyc03g115060.3 245 243 381 341 259 334 338 257 239 243 289 245 233 310 257 suppressor SRP40-like protein (AHRD V3.3 *-* AT2G03630.2) AT1G74220 Solyc03g115070.1 1061 752 1410 900 606 633 570 509 622 924 1251 740 1422 899 1041 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1U8FWZ7_CAPAN) Solyc03g150156.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc03g115080.2 59 53 35 27 60 32 38 65 50 47 31 77 53 23 31 Presenilin (AHRD V3.3 *-* A0A2G3CYZ9_CAPCH) Solyc03g115090.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g115100.4 396 392 433 474 391 608 540 450 612 392 501 538 432 587 584 hypothetical protein (AHRD V3.3 *** AT5G61040.1) AT5G61040 Solyc03g115110.4 2330 3656 3638 3789 4079 4057 4147 4405 3639 3184 3087 3233 4179 3847 3204 ATP synthase subunit gamma (AHRD V3.3 *** A0A2I4EZN6_9ROSI) AT2G33040 Solyc03g115120.1 182 227 283 252 285 337 314 291 291 215 307 256 277 250 301 DNAJ protein JJJ1 homolog (AHRD V3.3 *** A0A2I4EZM7_9ROSI) Solyc03g115140.4 1214 1077 1246 1174 1024 1389 1455 1019 1093 686 1740 899 1055 1062 1582 DNAJ protein JJJ1 homolog (AHRD V3.3 *** A0A2I4EZM7_9ROSI) AT1G74250 Solyc03g115150.4 246 575 556 547 946 990 810 1012 578 498 521 652 578 490 492 Histone deacetylase (AHRD V3.3 *** A0A2G3A292_CAPAN) AT5G61060 Solyc03g115160.3 67 118 186 135 214 226 205 241 97 108 146 153 144 141 40 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* F4KE59_ARATH) Solyc03g115165.1 7 24 33 9 47 49 43 57 9 8 1 23 12 13 5 Unknown protein Solyc03g115170.1 156 67 91 82 58 71 85 42 63 96 95 76 70 87 122 Unknown protein Solyc03g115180.3 1 7 3 1 1 0 0 0 3 0 0 2 3 7 10 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* F4KE59_ARATH) Solyc03g115190.4 100 30 29 47 16 30 37 39 29 34 18 46 33 42 35 Unknown protein Solyc03g115200.3 5300 12152 11670 9883 20578 15705 14975 19275 14746 11095 11205 12422 12283 8165 7237 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* A0A1P8AZV6_ARATH) AT1G18650 Solyc03g115220.4 1962 1356 629 825 503 523 526 323 1369 985 1116 807 689 843 1276 Flavonoid 3'-monooxygenase (AHRD V3.3 *** A0A2G2WR53_CAPBA) AT5G07990 Solyc03g115230.3 1089 372 524 349 446 422 406 427 460 295 226 508 296 241 223 Solanum lycopersicum heat shock protein AT1G74310 Solyc03g115240.4 1446 1428 1371 1220 1160 1399 1327 1423 1730 1111 1136 1222 1450 1569 1583 Protein LEO1-like protein (AHRD V3.3 *** A0A2G3CZ66_CAPCH) AT5G61150 Solyc03g115250.4 4700 3774 2611 2831 3079 3137 3018 3258 3303 3651 2535 3219 2911 3205 2609 Dentin sialophosphoprotein-like protein (AHRD V3.3 *-* Q9SD86_ARATH) AT5G07980 Solyc03g115270.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Expansin (AHRD V3.3 *** K4BL29_SOLLC) AT5G39280 Solyc03g115280.1 90 70 140 88 40 106 85 85 72 82 84 80 49 80 120 dentin sialophosphoprotein-like protein (AHRD V3.3 *-* AT5G07940.3) Solyc03g115290.3 30 32 35 32 59 25 16 16 16 38 33 46 15 28 16 Unknown protein Solyc03g115300.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Expansin (AHRD V3.3 *** K4BL32_SOLLC) AT5G39280 Solyc03g115310.1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 Expansin (AHRD V3.3 *** K4BL33_SOLLC) AT5G39280 Solyc03g115320.3 0 2 0 2 8 2 5 0 0 0 2 0 0 0 0 Expansin (AHRD V3.3 *** K4BL34_SOLLC) AT5G39280 Solyc03g115330.2 240 190 317 207 205 200 199 160 164 162 218 207 168 178 211 Unknown protein Solyc03g115340.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Expansin (AHRD V3.3 *** K4BL36_SOLLC) Solyc03g115345.1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 Expansin (AHRD V3.3 *** K4BL37_SOLLC) AT5G39280 Solyc03g115360.3 8909 15033 16981 11544 14520 14839 15073 13671 9813 7418 12985 10313 16238 14303 15078 40S ribosomal protein S19 (AHRD V3.3 *** A0A1U8G3N2_CAPAN) AT5G61170 Solyc03g115370.3 1973 852 1521 1140 777 766 807 762 1104 1426 2042 1020 745 981 1362 Diacylglycerol kinase (AHRD V3.3 *** A0A1U8G5K6_CAPAN) AT5G07920 Solyc03g115380.3 200 865 2017 650 806 954 994 773 1011 1126 1626 1190 563 737 681 UDP-glucose 6-dehydrogenase (AHRD V3.3 *** A0A2G3CZ71_CAPCH) Solyc03g115390.4 2109 1655 1658 1472 1297 1574 1647 1287 1396 1188 1419 1341 1539 1823 1702 RNA helicase DEAH-box10 AT1G32490 Solyc03g115400.2 71 74 57 51 81 49 39 99 86 60 4 86 54 68 42 RNA helicase family protein (AHRD V3.3 *-* A0A2U1MR71_ARTAN) Solyc03g115410.3 776 394 534 386 225 163 179 240 264 627 412 346 363 276 384 Plant intracellular Ras-group-related LRR protein (AHRD V3.3 *** A0A2R6PRR8_ACTCH) AT5G07910 Solyc03g115420.3 714 743 611 570 605 766 624 495 474 484 582 466 823 687 802 F-box protein (AHRD V3.3 *** A0A2I0VRX1_9ASPA) AT1G68960 Solyc03g115430.2 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 MYB transcription factor MYB150 (AHRD V3.3 --* NP_001236473.2) Solyc03g115440.3 727 569 445 416 373 426 445 454 578 499 449 531 552 491 563 ELM2 domain protein (AHRD V3.3 *** A0A1P8ARJ3_ARATH) AT1G26580 Solyc03g115450.1 8 13 20 16 17 19 7 16 20 8 31 16 24 24 23 Zinc finger protein (AHRD V3.3 *-* A0A200QBU2_9MAGN) Solyc03g115460.3 404 489 339 472 454 501 346 449 384 400 430 377 628 567 379 transmembrane protein (AHRD V3.3 *** AT3G12650.1) AT3G12650 Solyc03g115465.1 7 7 2 5 2 5 2 10 5 12 10 6 7 7 1 RING/U-box superfamily protein (AHRD V3.3 *-* A0A178VMT5_ARATH) Solyc03g115470.3 711 674 878 783 1009 1050 1072 990 994 638 881 989 559 656 1056 SNAP25-like proteinous protein SNAP33 (AHRD V3.3 *** A0A2G3CZ65_CAPCH) AT5G61210 Solyc03g115480.1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc03g115490.1 449 685 834 585 773 798 860 715 601 441 660 657 755 796 671 Complex 1 LYR protein (AHRD V3.3 *** A0A200PRD6_9MAGN) AT5G61220 Solyc03g115500.3 1571 1015 1120 1586 1391 1535 1702 1209 1305 1526 2155 1064 1076 1349 1691 Heparanase-like protein 1 (AHRD V3.3 *** A0A2G3CZA9_CAPCH) AT5G07830 Solyc03g115510.3 597 682 737 756 573 566 719 624 945 778 610 714 714 898 733 S phase cyclin A-associated protein in the endoplasmic reticulum (AHRD V3.3 *** A0A2U1L387_ARTAN) Solyc03g115530.4 1091 1129 1230 1296 1146 1136 1348 1291 998 826 960 1195 901 1292 1345 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 (AHRD V3.3 *-* A0A2I4G552_9ROSI) Solyc03g115540.2 35 54 34 55 21 44 38 20 84 67 189 40 40 46 56 bHLH transcription factor 024 Solyc03g115550.3 966 505 451 441 263 340 403 310 337 465 404 417 347 520 450 Unknown protein Solyc03g115560.3 76 571 279 328 545 468 546 448 296 171 214 206 148 238 252 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G2WR93_CAPBA) AT5G07800 Solyc03g115570.1 22 22 26 51 17 32 12 27 29 14 11 37 29 45 51 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WGW9_9ASPA) Solyc03g115580.4 450 322 304 301 253 272 290 265 242 314 290 282 323 348 282 DNA excision repair protein ERCC-1 (AHRD V3.3 *** A0A2G3A240_CAPAN) AT3G05210 Solyc03g115590.4 1158 665 1115 1028 673 719 758 561 917 805 977 657 991 945 1476 DUF863 domain-containing protein (AHRD V3.3 *-* A0A1Q3C321_CEPFO) Solyc03g115600.4 21 19 16 12 26 28 42 14 14 9 16 9 5 16 7 Zinc finger RNA-binding protein (AHRD V3.3 *-* A0A0A9Y5M7_LYGHE) Solyc03g115610.3 56 44 11 29 12 3 6 3 13 24 40 21 31 52 21 LRR receptor-like kinase family protein (AHRD V3.3 *** A0A072USD7_MEDTR) AT1G74360 Solyc03g115620.2 0 7 0 2 12 7 4 14 2 1 6 5 1 1 0 weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 --* AT1G12150.2) Solyc03g115630.3 2274 2562 2108 1886 1760 1914 1654 1945 2075 1799 1477 1806 2949 2411 2693 Carbamoyl-phosphate synthase small chain (AHRD V3.3 *** A0A1U8FVX2_CAPAN) AT3G27740 Solyc03g115640.3 86 494 361 429 631 529 561 449 433 228 380 410 335 374 570 DUF538 domain-containing protein (AHRD V3.3 *** A0A1Q3AZJ7_CEPFO) AT2G03350 Solyc03g115650.4 20587 5176 2097 3205 817 836 651 502 2097 2132 2280 1576 2474 3420 3581 eukaryotic translation initiation factor 5A-1 AT1G69410 Solyc03g115655.1 0 1 1 0 0 0 0 0 0 0 0 0 0 2 0 Unknown protein Solyc03g115660.3 788 1048 1583 1543 683 915 872 707 1140 870 1481 1075 1047 1410 1942 Protein kinase superfamily protein (AHRD V3.3 *** A0A1P8AQ94_ARATH) AT1G18670 Solyc03g115665.1 50 39 45 29 83 49 59 90 102 84 29 72 25 56 25 Unknown protein Solyc03g115680.4 2824 2801 2548 3448 2353 2510 3082 2715 2553 3623 2745 3058 1814 2549 2564 Formin-like protein (AHRD V3.3 *-* A0A328D036_9ASTE) Solyc03g115690.1 2 29 21 20 16 25 26 18 27 45 25 9 11 9 9 transmembrane protein (AHRD V3.3 *** AT5G61340.2) AT5G61340 Solyc03g115700.3 2108 853 734 805 537 632 582 642 908 1107 775 813 858 898 770 SNF1-related protein kinase Solyc03g115710.1 0 0 5 4 0 0 0 0 1 0 1 0 0 0 0 Receptor-like protein kinase THESEUS 1 (AHRD V3.3 *** A0A1U8G3K7_CAPAN) AT5G61350 Solyc03g115720.3 605 477 482 502 387 503 524 508 534 445 458 396 441 393 462 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *** A0A2U1MKI1_ARTAN) AT1G18660 Solyc03g115730.3 701 706 540 629 635 695 660 669 519 653 599 591 627 609 492 Unknown protein AT5G61360 Solyc03g115740.2 497 681 690 485 438 520 412 500 648 590 759 490 628 457 458 Galactosyl transferase GMA12/MNN10 family protein (AHRD V3.3 *** A0A2U1L978_ARTAN) AT1G74380 Solyc03g115750.1 4 2 0 4 0 1 1 0 1 1 16 4 0 2 0 Xyloglucan galactosyltransferase KATAMARI1-like protein (AHRD V3.3 *** A0A2G3CZB2_CAPCH) AT2G29040 Solyc03g115760.3 2723 1759 1703 1549 1606 1699 1720 1502 1661 1806 1698 1656 1665 1575 2157 Vesicle transport v-SNARE protein (AHRD V3.3 *** A0A0K0XR76_TOBAC) AT5G39510 Solyc03g115770.3 690 402 1307 1007 256 168 155 216 860 498 1707 708 479 1167 1924 Two-component response regulator-like APRR5 (AHRD V3.3 *** A0A2G3CZB4_CAPCH) AT5G61380 Solyc03g115780.2 21 68 97 60 134 142 138 174 83 71 60 95 17 32 20 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1N8M3_ARTAN) AT1G74390 Solyc03g115790.1 33 54 72 76 65 56 58 58 30 28 38 37 70 65 45 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2K3KXX2_TRIPR) Solyc03g115800.1 11 29 3 13 5 9 11 3 8 8 7 8 16 20 25 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QP29_9MAGN) AT1G74400 Solyc03g115810.3 1824 1387 1569 1512 1337 1493 1537 1332 1464 1530 1485 1447 1365 1541 1641 Solyc03g115810 AT2G28390 Solyc03g115815.1 11 24 18 22 9 14 22 9 12 8 24 11 18 7 9 Unknown protein Solyc03g115820.3 1487 1740 1323 1074 1672 1614 1530 1836 1648 1878 1108 1621 1226 1104 1361 Ribulose-phosphate 3-epimerase-like (AHRD V3.3 *** A0A200QP25_9MAGN) AT5G61410 Solyc03g115830.2 0 2 1 0 0 0 2 2 0 0 1 0 0 2 0 Galactoside 2-alpha-L-fucosyltransferase (AHRD V3.3 *** A0A2G3CZE8_CAPCH) AT2G03220 Solyc03g115840.4 733 832 933 766 991 858 909 881 873 797 786 759 939 948 1183 DNAJ heat shock N-terminal domain-containing protein (AHRD V3.3 *** A0A2U1LKC9_ARTAN) AT1G18700 Solyc03g115850.3 298 89 47 29 3 4 3 1 16 25 38 5 75 80 63 NAC domain-containing protein (AHRD V3.3 *** A0A2G3CZC4_CAPCH) AT5G61430 Solyc03g115860.3 513 516 786 696 644 701 677 582 528 728 803 638 708 618 628 ER membrane protein, putative (DUF962) (AHRD V3.3 *** Q9CA70_ARATH) AT1G18720 Solyc03g115870.3 370 230 228 135 522 456 520 377 139 364 491 210 94 82 167 Thioredoxin-like 1-2, chloroplastic (AHRD V3.3 *** A0A2G3CZB1_CAPCH) AT5G61440 Solyc03g115880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g115890.3 37 121 51 85 83 80 81 88 121 57 25 61 74 140 80 expansin 10 Solyc03g115900.4 3673 6155 1794 4970 12358 10982 10741 11638 6228 7267 2120 5215 4595 1694 1479 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A1U8G3I4_CAPAN) AT3G47470 Solyc03g115920.3 2812 1090 448 419 9 14 3 17 122 628 557 59 1906 719 701 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8GHK6_CAPAN) Solyc03g115930.3 376 256 154 69 1 0 1 3 56 249 271 18 1167 398 160 Calcium-binding EF-hand family protein (AHRD V3.3 *-* A0A2U1NCV0_ARTAN) Solyc03g115940.4 3256 1473 352 1159 652 638 717 576 879 1663 525 712 1018 798 1356 Dof zinc finger protein (AHRD V3.3 *** A0A2K3MQ38_TRIPR) AT3G47500 Solyc03g115950.3 65 88 343 231 97 58 66 39 105 59 125 47 137 105 198 BnaA06g38590D protein (AHRD V3.3 *** A0A078IDZ0_BRANA) Solyc03g115960.3 2 0 0 0 0 0 0 0 0 0 7 3 4 3 0 GDSL esterase/lipase (AHRD V3.3 *** A0A1U8G8B0_CAPAN) AT1G74460 Solyc03g115970.2 0 0 3 7 0 0 1 0 0 0 0 0 0 0 0 protein yippee-like (AHRD V3.3 *** XP_025887510.1) Solyc03g115980.1 2632 8265 2546 3650 10123 7578 7415 11460 8371 6382 2241 6140 4477 3275 2434 Geranylgeranyl diphosphate reductase, chloroplastic (AHRD V3.3 *** A0A2G2WR46_CAPBA) AT1G74470 Solyc03g115985.1 4 5 1 10 17 20 11 16 11 10 2 12 4 12 2 Unknown protein Solyc03g115990.3 570 1163 407 534 658 603 535 722 790 453 448 555 1166 1054 650 Malate dehydrogenase (AHRD V3.3 *** O48906_MEDSA) AT3G47520 Solyc03g116000.1 58 68 30 64 51 46 56 76 33 28 24 58 99 51 28 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8G5F5_CAPAN) AT3G47530 Solyc03g116010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RWP-RK domain-containing protein (AHRD V3.3 *** A0A1Q3AZ30_CEPFO) AT1G74480 Solyc03g116020.3 1585 1601 1577 1197 1351 1532 1082 1260 967 832 1266 1044 1902 1853 1803 DNA-directed RNA polymerase subunit (AHRD V3.3 *-* A0A1Q3CGP2_CEPFO) AT5G62440 Solyc03g116030.4 454 306 519 360 320 221 275 251 332 475 408 306 389 308 415 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NXA0_ARTAN) AT3G47550 Solyc03g116040.2 276 465 367 426 478 541 503 434 389 375 316 343 543 521 459 Exostosin-like (AHRD V3.3 *** A0A200QSE2_9MAGN) AT1G74680 Solyc03g116050.1 0 3 2 2 2 0 2 3 0 0 1 2 7 9 0 Pre-mRNA-splicing factor CWC22-like protein (AHRD V3.3 *-* A0A2G3BQE7_CAPCH) Solyc03g116060.4 355 24017 17522 18604 53805 44059 44184 48061 15516 3453 12492 20462 7216 33708 8563 Gibberellin-regulated protein 6 (AHRD V3.3 *** A0A2G3CZG9_CAPCH) AT1G74670 Solyc03g116070.1 0 0 4 1 0 3 0 8 7 0 5 10 6 2 28 Mini zinc finger protein 1 (AHRD V3.3 *** A0A1U8G8V9_CAPAN) AT1G18835 Solyc03g116090.2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc03g116100.3 1233 558 691 557 109 134 66 72 296 355 727 212 415 530 1330 R2R3MYB transcription factor 31 AT5G62470 Solyc03g116110.3 587 728 483 598 670 537 511 701 657 749 480 636 892 675 725 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KGJ2_ARTAN) AT1G74640 Solyc03g116120.3 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QF27_9MAGN) AT5G62480 Solyc03g116130.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QF27_9MAGN) AT1G74590 Solyc03g116140.3 509 784 772 837 1018 1043 855 1098 997 557 823 1042 925 896 643 activating signal cointegrator 1 (AHRD V3.3 *** A0A2I4F4P6_9ROSI) AT3G47610 Solyc03g116150.4 195 339 275 299 332 377 281 368 413 231 260 268 300 327 202 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1LK68_ARTAN) Solyc03g116160.1 4 7 25 10 16 16 36 23 18 9 15 15 2 14 14 protein PHYTOCHROME KINASE SUBSTRATE 3-like (AHRD V3.3 *** A0A2I4F4L3_9ROSI) AT1G18810 Solyc03g116170.3 447 1010 771 485 507 528 576 615 436 266 392 557 1352 1090 779 Nucleosome assembly protein family (AHRD V3.3 *** A9RDK1_PHYPA) AT1G18800 Solyc03g116173.1 4 2 0 4 0 1 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MRD5_TRIPR) Solyc03g116175.1 1 0 0 0 0 3 2 0 0 0 0 0 0 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3CN06_NOCCA) Solyc03g116177.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3CN06_NOCCA) Solyc03g116190.2 0 0 0 1 1 1 2 1 0 0 0 4 0 0 0 Chitinase (AHRD V3.3 *-* P93327_MEDTR) Solyc03g116200.2 0 0 0 0 0 0 0 0 3 46 0 8 0 0 0 Unknown protein Solyc03g116220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g116230.4 0 3 7 9 11 19 22 10 11 13 68 35 7 7 0 Chitin-binding lectin 1 (AHRD V3.3 *-* LECT_SOLTU) Solyc03g116240.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 endochitinase-like (AHRD V3.3 --* A0A2I4FV55_9ROSI) Solyc03g150157.1 537 350 481 649 433 716 637 531 177 310 331 368 230 372 381 Cathepsin B (AHRD V3.3 *-* A0A2G2XYT9_CAPAN) Solyc03g150158.1 4 11 10 3 6 4 10 7 2 2 0 0 0 9 1 Unknown protein Solyc03g116250.2 37 48 52 36 26 27 31 21 8 24 24 6 36 30 81 Unknown protein Solyc03g116260.3 1 2 1 12 0 10 4 6 3 1 0 0 3 2 10 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9LJ66_ARATH) Solyc03g116270.3 14 6 0 26 6 4 3 8 38 9 0 1 13 13 67 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QGX7_ARTAN) Solyc03g116280.3 107 171 160 243 70 132 114 44 184 99 229 69 193 155 198 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* F4J670_ARATH) Solyc03g116290.3 26 18 19 66 9 5 4 0 26 11 28 5 48 26 7 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4JLS2_ARATH) Solyc03g116320.3 820 1116 432 631 1997 1659 1885 1633 864 602 858 962 607 882 933 TCP transcription factor 16 AT3G47620 Solyc03g116330.3 614 619 749 814 841 797 804 704 724 666 856 723 810 888 799 transmembrane protein (AHRD V3.3 *** AT1G74530.3) AT1G74530 Solyc03g116340.3 2228 1140 1454 855 823 840 693 705 782 1391 2126 944 1055 876 1171 bHLH transcription factor 025 AT3G47640 Solyc03g116350.3 1710 1077 1082 1086 1063 1009 863 819 1233 1281 884 1077 1244 1142 1153 HVA22-like protein (AHRD V3.3 *** A0A1U8FVF2_CAPAN) AT1G74520 Solyc03g116360.2 40 150 160 179 248 309 378 247 161 78 103 146 130 259 128 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A1I9LLL7_ARATH) Solyc03g116370.3 9 85 76 88 242 164 180 220 117 45 93 102 54 71 100 Microtubule-associated protein RP/EB family member 1C (AHRD V3.3 *** A0A2G3B798_CAPCH) AT5G62500 Solyc03g116380.4 2190 2409 1588 1485 1035 1115 1147 963 1037 1018 1297 1144 2506 2500 2204 WD repeat-containing protein 43-like (AHRD V3.3 *** A0A2K3MVU6_TRIPR) Solyc03g116390.4 603 87 209 215 14 21 8 17 527 491 262 460 62 426 959 Late embryogenesis abundant protein Dc3 (AHRD V3.3 *** A0A1U8FUJ0_CAPAN) AT3G15670 Solyc03g116400.3 1 0 9 6 0 0 0 0 5 2 12 2 5 11 74 late embryogenesis abundant protein-related / LEA protein-like protein (AHRD V3.3 --* AT1G52680.1) Solyc03g116410.3 0 4 1 0 3 4 6 14 6 3 13 10 11 6 1 Zinc finger transcription factor 28 Solyc03g116420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger transcription factor 29 Solyc03g116430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g116440.3 21 11 18 3 0 6 0 1 0 4 2 1 5 9 2 PHD finger protein At2g01810 (AHRD V3.3 *** Y2181_ARATH) Solyc03g116450.1 1 8 4 23 0 8 12 5 6 3 1 1 2 8 6 Stigma-specific protein Stig1 (AHRD V3.3 *-* A0A200RBB8_9MAGN) AT1G50650 Solyc03g116460.4 696 549 829 1149 280 465 503 262 999 488 785 852 961 1374 1544 Aspartate racemase (AHRD V3.3 *** A0A2K3MVX4_TRIPR) AT1G15410 Solyc03g116470.2 22 11 4 13 4 9 6 10 12 8 0 5 17 14 0 transmembrane protein (AHRD V3.3 *** AT1G80200.3) AT5G11280 Solyc03g116480.1 34 19 15 13 21 22 20 18 20 25 27 15 24 30 23 F-box/kelch-repeat protein At5g15710-like (AHRD V3.3 *** A0A2I4DW48_9ROSI) Solyc03g116490.1 158 84 54 119 20 27 20 22 94 58 126 50 89 80 226 hypothetical protein (AHRD V3.3 *** AT1G15400.3) AT1G80180 Solyc03g116500.4 420 833 904 1075 1376 1607 1493 1288 1173 742 1346 937 731 834 925 polygalacturonase (XOPG1) AT1G80170 Solyc03g116510.1 55 124 26 32 29 35 22 22 42 68 39 31 108 98 19 DUF761 domain-containing protein (AHRD V3.3 *** A0A1Q3BDS4_CEPFO) AT1G15385 Solyc03g116520.1 0 6 10 9 6 3 2 0 9 1 0 4 24 1 0 Unknown protein AT1G15385 Solyc03g116530.3 32 88 109 97 141 106 101 88 217 164 115 46 255 93 103 Lactoylglutathione lyase / glyoxalase I family protein (AHRD V3.3 *** A0A2U1MV65_ARTAN) AT1G80160 Solyc03g116540.1 22 53 29 26 29 36 24 36 29 23 12 36 23 34 47 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3B795_CAPCH) AT1G52640 Solyc03g116550.4 337 386 601 592 497 580 623 486 371 423 610 435 332 476 442 O-fucosyltransferase family protein (AHRD V3.3 *** A0A2U1MV70_ARTAN) AT1G52630 Solyc03g116560.1 429 363 303 331 285 243 318 353 270 272 169 331 217 350 341 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QVA5_9MAGN) AT1G52620 Solyc03g116570.3 260 136 74 111 118 101 99 128 91 138 86 99 112 79 145 Thiol-disulfide oxidoreductase DCC family protein (AHRD V3.3 *** A0A2U1Z9Z9_PSEAV) AT1G52590 Solyc03g116580.4 0 0 0 2 6 4 8 0 2 1 2 2 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1PQE9_ARTAN) Solyc03g116590.3 2126 5512 6251 6071 8329 6447 6387 7787 13914 14995 11975 20839 6200 8752 3650 Embryo-specific protein (AHRD V3.3 *** A0A2K3LFD9_TRIPR) AT5G62200 Solyc03g116600.3 298 357 533 515 476 472 457 382 340 355 368 309 441 387 358 SNARE-like superfamily protein (AHRD V3.3 *** A0A2U1KJN4_ARTAN) AT1G15370 Solyc03g116610.3 117 104 133 139 68 58 34 66 140 78 100 78 63 80 47 Ethylene-responsive transcription factor WIN1 (AHRD V3.3 *** A0A1U8G4C9_CAPAN) AT1G15360 Solyc03g116620.3 2 4 13 3 0 0 1 1 2 1 0 0 1 2 0 Phospholipase D (AHRD V3.3 *** K4BLG4_SOLLC) AT1G52570 Solyc03g116625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g116630.3 1070 316 66 222 97 104 64 118 119 1044 255 169 320 145 271 cytochrome P450 family protein (AHRD V3.3 *** AT1G52565.1) AT1G52565 Solyc03g116640.4 104 126 164 148 127 184 155 159 148 75 113 163 134 182 123 DUF4050 family protein (AHRD V3.3 *** Q8L920_ARATH) Solyc03g116650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EPIDERMAL PATTERNING FACTOR-like protein 8 (AHRD V3.3 *** A0A2I4H6E6_9ROSI),Pfam:PF17181 AT1G80133 Solyc03g116660.3 45 82 38 135 81 101 126 76 44 65 44 86 91 121 87 transmembrane protein (AHRD V3.3 --* AT3G15780.1) Solyc03g116670.3 8316 3815 6545 5496 1500 1993 2024 1068 4623 5833 9246 4859 5828 7198 15592 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* F4K464_ARATH) AT1G80130 Solyc03g116680.3 5837 2236 2291 1541 1103 1084 874 908 2433 2786 2834 2317 2348 2329 3429 Methyl-CpG-binding domain-containing protein 11 (AHRD V3.3 *** A0A2G2WQS8_CAPBA) Solyc03g116690.3 26 5 0 13 0 2 0 0 11 27 24 4 17 27 37 Umecyanin (AHRD V3.3 *** A0A2G3B789_CAPCH) Solyc03g116700.4 261 206 119 120 10 14 19 4 400 127 429 48 202 261 219 Umecyanin (AHRD V3.3 *** A0A2G3B789_CAPCH) AT5G20230 Solyc03g116710.3 379 322 343 434 346 304 297 316 426 552 541 360 403 270 435 Protein LURP-one-related 5 (AHRD V3.3 *** A0A1U8GFL7_CAPAN) AT1G80120 Solyc03g116720.3 44 54 95 51 68 82 49 66 28 61 85 83 45 52 51 Histidine-containing phosphotransfer protein 6 (AHRD V3.3 *-* A0A2G2WQP2_CAPBA) AT1G80100 Solyc03g116730.4 381 987 438 654 2449 2614 2184 2281 787 745 436 939 386 319 229 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic (AHRD V3.3 *** A0A2G2WQQ5_CAPBA) AT3G15850 Solyc03g116740.3 242 833 997 802 1882 1932 1778 2053 707 1035 929 828 706 528 558 Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1 (AHRD V3.3 *** A0A1U8FVJ4_CAPAN) AT3G15820 Solyc03g116750.3 3205 3031 2880 2651 3349 3181 3318 3723 2388 3053 2195 2315 3020 2996 2728 TOPLESS (AHRD V3.3 *** A0A1D5XWZ6_WHEAT) AT3G15880 Solyc03g116760.3 268 295 391 299 352 444 358 381 345 317 263 290 265 322 298 PTI1-like tyrosine-protein kinase (AHRD V3.3 *** A0A1U8G4E7_CAPAN) AT1G52540 Solyc03g116770.3 0 0 0 10 0 2 3 2 2 2 0 0 0 0 9 seed dormancy control protein (AHRD V3.3 *** AT1G15320.2) AT1G15320 Solyc03g116780.3 2695 1711 1581 1390 1522 1300 1267 1312 1424 1895 1556 1662 1713 1623 1565 Ubiquitin system component Cue (AHRD V3.3 *** A0A200QTD9_9MAGN) Solyc03g116790.4 294 582 607 599 754 815 753 763 503 518 660 599 469 404 432 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G2WQT5_CAPBA) AT1G80030 Solyc03g116800.4 112 233 203 224 313 325 328 282 221 197 262 220 116 131 110 homoserine O-acetyltransferase (AHRD V3.3 *-* AT3G15900.1) Solyc03g116810.4 1119 1564 1109 1193 1322 1249 1188 1633 1760 1319 1123 1379 1673 1565 1215 Signal recognition particle 54 kDa protein (AHRD V3.3 *** A0A2G3A2L7_CAPAN) AT1G48900 Solyc03g116820.4 480 362 426 403 287 353 367 276 353 257 433 256 411 473 423 PX domain-containing protein (AHRD V3.3 *-* A0A1Q3AXP4_CEPFO) Solyc03g116830.4 514 389 212 225 245 215 225 345 427 465 325 329 281 336 232 Phox (PX) domain-containing protein (AHRD V3.3 *-* A0A1P8B237_ARATH) Solyc03g116840.3 216 485 314 327 264 381 372 287 296 141 260 315 439 468 221 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WHE4_9ASPA) Solyc03g116850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cyclic nucleotide-gated channel 6 (AHRD V3.3 *** A0A1P8AYC4_ARATH) Solyc03g116860.3 45 29 18 10 0 0 0 0 15 35 16 2 13 27 34 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** Q9FN10_ARATH) Solyc03g116870.3 86 174 216 188 356 340 308 266 248 127 223 173 126 176 373 NAD(P)H dehydrogenase subunit 48 (AHRD V3.3 *** A0A0F7GZU3_9ROSI) AT1G15980 Solyc03g116880.3 550 717 789 652 1025 914 883 861 880 715 808 875 707 641 748 DNA-3-methyladenine glycosylase I (AHRD V3.3 *** A0A2I0X0X0_9ASPA) Solyc03g116890.3 602 861 3753 238 10 5 5 13 173 660 3154 349 339 366 490 WRKY transcription factor 39 AT1G80840 Solyc03g116900.3 417 497 571 839 195 132 120 157 308 285 208 189 890 615 740 Metal transporter Nramp3 (AHRD V3.3 *** A0A2G2WQR3_CAPBA) AT1G80830 Solyc03g116910.3 340 500 199 399 329 310 272 251 299 186 114 171 444 454 382 cinnamoyl-CoA reductase 2 AT1G15950 Solyc03g116920.3 76 299 270 283 443 503 442 608 267 155 221 487 161 339 164 Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *-* A0A2K3PKD0_TRIPR) Solyc03g116930.3 488 310 475 412 372 460 418 436 403 339 351 439 397 502 557 Phospholipase-like protein (AHRD V3.3 *** A0A2U1PUP4_ARTAN) Solyc03g116940.3 9 19 6 19 4 6 14 3 11 5 20 14 2 24 14 Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *-* A0A2K3PKD0_TRIPR) Solyc03g116950.2 52 41 13 18 0 0 5 0 11 2 51 43 21 38 46 Phospholipase-like protein (AHRD V3.3 *-* A0A2U1KY47_ARTAN) AT5G11140 Solyc03g116960.4 25 11 2 7 0 0 0 2 1 0 20 17 8 2 20 Unknown protein Solyc03g116970.3 436 255 298 188 29 66 49 57 82 169 287 254 159 338 288 Phospholipase-like protein (PEARLI 4) family protein (AHRD V3.3 *-* A8MQE1_ARATH) Solyc03g116973.1 38 18 15 9 0 3 1 7 3 21 4 14 9 12 2 sister chromatid cohesion protein PDS5 homolog B-like isoform X1 (AHRD V3.3 --* XP_019068668.1) Solyc03g116977.1 42 18 14 5 5 4 0 6 10 18 4 10 11 29 1 Unknown protein Solyc03g116990.1 230 195 60 78 63 69 102 67 47 71 96 79 194 145 124 Protein transport protein Sec61 subunit beta (AHRD V3.3 *-* A0A2G2Z9Z7_CAPAN) AT5G60460 Solyc03g117000.3 344 535 493 606 657 780 806 600 445 364 570 458 521 454 412 Vesicle transport protein (AHRD V3.3 *** A0A1U8FZ01_CAPAN) AT5G24170 Solyc03g117010.4 1700 1399 1584 1506 1758 1811 1893 1846 1686 1486 1526 1617 1201 1551 1473 Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *-* A0A2K3PKD0_TRIPR) Solyc03g117020.4 1256 1516 1151 1153 1491 1214 1218 1649 1808 1831 1100 1854 2525 1792 1243 Stromal cell-derived factor 2-like protein (AHRD V3.3 *** A0A2G3CZD1_CAPCH) AT2G25110 Solyc03g117030.2 373 448 467 385 495 532 500 405 387 414 444 347 558 495 579 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** F4HU15_ARATH) AT2G32070 Solyc03g117040.3 6374 4646 4203 3876 4721 4472 3977 4547 5977 4026 3897 4893 4747 4576 4933 XH/XS domain-containing protein (AHRD V3.3 *** A0A2U1NJY3_ARTAN) AT1G15910 Solyc03g117050.4 498 606 196 638 136 116 99 67 249 353 221 99 528 175 357 NOD26-like intrinsic protein 6.1 AT1G80760 Solyc03g117060.4 5996 3822 3886 2744 3027 3562 3131 2826 2674 2919 3290 3432 3948 3205 3552 60S ribosomal protein L7-1 (AHRD V3.3 *** A0A2G2WQS6_CAPBA) AT1G80750 Solyc03g117070.1 194 175 106 189 81 65 46 48 260 299 183 192 283 253 244 Zinc finger protein 4 (AHRD V3.3 *** A0A2G3CZF7_CAPCH) AT5G10970 Solyc03g117080.4 118 175 214 198 200 164 218 118 147 111 172 165 340 316 288 Mitochondrial glycoprotein (AHRD V3.3 *** A0A200PPZ5_9MAGN) AT1G15870 Solyc03g117090.3 267 349 302 320 424 360 361 335 311 249 377 257 468 393 383 stress response NST1-like protein (AHRD V3.3 *-* AT1G80980.2) AT1G80700 Solyc03g117100.3 52 173 255 176 202 249 242 153 165 100 200 158 161 165 124 PPPDE thiol peptidase family protein (AHRD V3.3 *-* O49393_ARATH) AT1G80690 Solyc03g117110.4 428 624 784 718 666 659 717 485 570 485 828 472 568 585 692 Defective in cullin neddylation protein (AHRD V3.3 *** A0A1U8G2K4_CAPAN) AT1G15860 Solyc03g117120.4 1989 2422 2039 2211 2100 2203 2394 2274 1650 1440 1687 2094 2215 2476 1720 Nuclear pore complex protein NUP96 (AHRD V3.3 *** A0A1U8FUU9_CAPAN) AT1G80680 Solyc03g117130.3 20 21 8 0 0 0 0 0 10 10 3 4 20 28 9 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A1U8G8S1_CAPAN) Solyc03g117150.3 9 11 11 10 5 4 3 6 7 10 8 12 7 2 20 Plasma membrane ATPase (AHRD V3.3 *** A0A2G3A2L5_CAPAN) Solyc03g117160.4 18 12 2 4 8 7 5 6 9 7 15 6 3 12 13 Unknown protein Solyc03g117170.1 9 4 2 2 3 7 12 9 7 6 13 5 7 1 0 Beta-3 adrenergic receptor, putative (AHRD V3.3 *** A0A061G984_THECC) Solyc03g117180.3 310 819 950 910 854 999 993 944 883 708 749 902 889 829 517 Protein kinase superfamily protein (AHRD V3.3 *** F4IRL6_ARATH) AT2G25220 Solyc03g117190.1 35 30 49 69 26 19 33 16 13 59 29 36 38 26 18 extensin-1-like (AHRD V3.3 *-* XP_019068238.1) Solyc03g117210.4 697 462 404 282 350 360 300 317 296 458 449 360 400 410 704 hypothetical protein (AHRD V3.3 *** AT1G80610.1) AT1G80610 Solyc03g117230.1 105 38 55 71 124 121 92 133 61 67 66 93 53 84 67 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2WQP9_CAPBA) AT1G80580 Solyc03g117240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 flotillin-like protein 3 (AHRD V3.3 --* XP_021866656.1) Solyc03g117250.4 349 229 388 450 24 16 7 14 325 205 178 70 197 201 137 Flotillin-like protein 2 (AHRD V3.3 *** A0A2G3CZJ6_CAPCH) Solyc03g117255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g117260.2 0 0 0 1 0 0 0 0 0 2 2 0 0 0 0 DUF247 domain-containing protein (AHRD V3.3 *** A0A1Q3CSX8_CEPFO) AT3G02645 Solyc03g117270.1 589 1138 643 519 1497 1047 1077 1430 588 1142 748 1040 591 496 434 F-box family protein (AHRD V3.3 *** A0A2U1L823_ARTAN) Solyc03g117280.4 707 1042 1105 1066 1355 1419 1407 1611 1135 1110 948 1376 581 787 656 envelope glycoprotein B (AHRD V3.3 *** AT1G80540.1) Solyc03g117290.1 1252 801 654 814 695 720 758 609 461 886 738 663 630 854 1285 Serine-rich protein (AHRD V3.3 *** E5GCC5_CUCME) AT5G25280 Solyc03g117300.4 572 403 576 611 508 539 363 460 507 568 547 687 485 588 530 Nodulin-like, Major facilitator superfamily domain protein (AHRD V3.3 *** A0A2U1PCN1_ARTAN) AT1G80530 Solyc03g117310.1 17 36 17 21 9 26 30 12 41 35 42 9 34 23 58 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 *** Q9M8M0_ARATH) Solyc03g117320.4 1074 1026 957 838 947 884 853 923 832 957 791 986 1040 862 946 50S ribosomal protein L3 (AHRD V3.3 *** A0A2G3CZF6_CAPCH) AT3G17465 Solyc03g117330.4 437 484 446 336 192 236 276 322 463 517 363 328 800 506 470 Proline-tRNA ligase (AHRD V3.3 *** X8JBM9_9HOMO) AT3G62120 Solyc03g117340.1 142 174 200 211 294 277 253 293 249 231 193 149 297 214 238 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 *** Q9M8M0_ARATH) AT1G80520 Solyc03g117345.1 12 19 33 24 24 29 33 16 12 15 55 33 14 16 29 Unknown protein Solyc03g117350.1 88 70 32 89 97 102 95 117 90 74 57 94 85 114 84 Amino acid transporter (AHRD V3.3 *** A0A200QAF8_9MAGN) AT1G80510 Solyc03g117360.4 14337 11087 8903 10270 9945 10102 10469 11357 11029 14552 9932 10541 9375 10036 9937 TOPLESS1 AT1G15750 Solyc03g117370.3 773 446 710 884 501 713 792 482 574 523 789 493 563 550 925 TOPLESS (AHRD V3.3 *-* K4BLN8_SOLLC) Solyc03g117380.4 84 74 64 37 56 57 61 43 53 53 51 47 65 66 60 Unknown protein Solyc03g117390.3 21 24 39 27 35 31 19 28 23 25 22 30 27 20 25 topless-related protein 1-like (AHRD V3.3 --* XP_025678104.1) Solyc03g117400.4 42 23 8 19 1 10 15 17 44 6 19 18 14 30 21 TOPLESS (AHRD V3.3 *-* K4BLN8_SOLLC) Solyc03g117410.2 402 198 216 153 100 164 137 91 136 107 227 131 161 206 242 TOPLESS (AHRD V3.3 *-* K4BLN8_SOLLC) Solyc03g117420.4 7301 2101 1616 1943 1431 1605 1336 1329 1710 3746 2067 2073 1123 1722 2715 F-box/LRR-repeat protein 14-like (AHRD V3.3 *** A0A2I4G8X3_9ROSI) AT1G15740 Solyc03g150159.1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 Gag/pol polyprotein (AHRD V3.3 *-* A0A2K3PL47_TRIPR) Solyc03g117430.3 820 726 961 717 541 590 556 715 915 778 710 923 734 824 894 Cobalamin biosynthesis protein CobW (AHRD V3.3 *** A0A2T6CU39_9BACT) AT1G80480 Solyc03g117440.3 1219 752 679 555 622 675 576 549 606 808 869 744 679 719 748 RNA helicase DEAD14 AT5G51280 Solyc03g117450.1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Major allergen Pru ar 1 (AHRD V3.3 *** A0A1U8G2N6_CAPAN) Solyc03g117460.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Major allergen Pru ar 1 (AHRD V3.3 *** A0A1U8G2N6_CAPAN) Solyc03g117470.3 579 490 467 580 451 470 552 498 473 550 437 547 499 401 427 Calcineurin subunit B (AHRD V3.3 *** B6U4N5_MAIZE) AT3G18430 Solyc03g117480.4 3654 6640 4076 3722 4631 4648 4322 5143 3800 4152 3035 4977 6720 6309 3218 Pyrophosphate-energized vacuolar membrane proton pump (AHRD V3.3 *** A0A1U8FVU1_CAPAN) AT1G15690 Solyc03g117490.4 321 219 123 149 110 129 119 150 201 238 68 128 225 175 153 Glycerol kinase (AHRD V3.3 *** A0A1U8FUZ6_CAPAN) AT1G80460 Solyc03g117500.1 171 318 380 354 591 776 600 682 315 256 447 394 151 199 166 VQ motif-containing protein (AHRD V3.3 *** A0A2U1PE46_ARTAN) AT1G80450 Solyc03g117510.4 503 899 1094 811 1278 1348 1339 1266 866 553 1205 1159 794 993 882 Formamidopyrimidine-DNA glycosylase (AHRD V3.3 *** A0A2G2WQG8_CAPBA) AT1G52500 Solyc03g117520.3 331 217 328 351 331 309 337 318 356 324 300 335 307 317 444 Protein FAR1-RELATED SEQUENCE 6 (AHRD V3.3 *** A0A2G2WQF9_CAPBA) AT1G52520 Solyc03g117530.1 503 450 505 532 399 451 463 453 358 408 372 416 245 338 301 Checkpoint protein (AHRD V3.3 *** A0A1U8G4P4_CAPAN) AT1G52530 Solyc03g117540.4 714 469 777 800 677 709 810 644 465 522 613 426 704 729 1044 ABC transporter C family member 13 (AHRD V3.3 *** A0A2G3CZQ5_CAPCH) AT2G07680 Solyc03g117550.1 331 599 654 628 650 677 668 654 683 311 558 605 772 712 728 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3MXF3_TRIPR) AT1G80870 Solyc03g117560.3 100 565 496 568 1293 1349 1539 1174 274 222 541 534 143 262 268 Plastocyanin-like (AHRD V3.3 *** A0A200PSX2_9MAGN) Solyc03g117570.3 110 105 137 78 103 137 164 101 76 64 78 72 109 106 107 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3CZN8_CAPCH) AT1G80880 Solyc03g117580.3 209 252 161 190 142 163 135 111 117 111 150 149 256 231 379 GAG1At protein (AHRD V3.3 *** AT1G16000.1) AT1G16000 Solyc03g117590.3 1338 482 433 171 1330 779 1483 1126 593 2331 451 481 136 128 168 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G2WQF7_CAPBA) AT1G80920 Solyc03g117600.3 1264 3243 1123 1597 2674 2607 2589 2908 2092 5043 1501 2609 1825 1847 599 Transferase (AHRD V3.3 *** A0A200QII6_9MAGN) AT5G48930 Solyc03g117610.2 3 7 4 9 4 4 6 3 8 9 4 4 5 1 11 Unknown protein Solyc03g117620.4 17 45 2 4 17 12 12 12 13 14 40 12 9 2 0 Heat shock 70 kDa protein (AHRD V3.3 *-* A0A1U8FVW2_CAPAN) Solyc03g117630.1 69 87 78 48 66 117 100 73 86 34 30 101 56 73 85 Heat shock 70 kDa protein (AHRD V3.3 *** A0A1U8FVW2_CAPAN) Solyc03g117640.1 60 52 77 33 57 71 51 45 58 28 36 61 75 83 55 MAP kinase kinase kinase 29 Solyc03g117650.4 256 234 259 272 212 267 261 221 217 173 230 234 241 270 215 Phosphatidylinositol-glycan biosynthesis class F protein (AHRD V3.3 *** A0A1J3CLV4_NOCCA) Solyc03g117660.4 410 260 405 385 342 431 352 486 367 465 303 418 229 306 405 RING/U-box superfamily protein (AHRD V3.3 *-* AT2G21500.2) Solyc03g117670.4 1546 921 954 726 819 897 897 766 827 985 1045 742 824 747 908 Snf1 kinase interactor-like protein (AHRD V3.3 *** A0A1P8AVK8_ARATH) AT1G80940 Solyc03g117680.4 3619 650 361 310 152 173 196 147 433 1982 757 418 449 408 637 ATP-dependent DNA helicase (AHRD V3.3 *** Q9ZUI1_ARATH) AT4G30780 Solyc03g117690.3 101 188 57 162 150 168 146 156 196 170 131 157 167 92 114 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1P524_ARTAN) AT1G79720 Solyc03g117710.3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 *-* A0A1P8AUY7_ARATH) Solyc03g117720.3 99 90 93 125 29 66 39 27 116 69 132 88 118 82 113 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3A2R5_CAPAN) AT1G16060 Solyc03g117730.3 60 562 416 525 1024 1076 983 1104 725 262 510 778 116 323 300 Tubby-like protein 8 (AHRD V3.3 *** A0A2G2WQC4_CAPBA) AT1G16070 Solyc03g117740.3 348 588 634 512 844 743 779 757 594 425 418 527 548 580 451 nuclear protein (AHRD V3.3 *** AT1G16080.1) AT1G16080 Solyc03g117750.3 110 190 177 183 181 217 200 197 203 169 181 196 265 208 187 Pectin lyase-like superfamily protein (AHRD V3.3 *** F4IE17_ARATH) Solyc03g117760.4 391 535 1131 809 810 946 845 683 636 683 1012 582 714 617 656 Unknown protein Solyc03g117770.3 7812 4312 3679 4192 3502 3274 3009 3277 3950 5753 3640 4298 4566 3618 3809 Serinc-domain containing serine and sphingolipid biosynthesis protein (AHRD V3.3 *** A0A2U1NLC6_ARTAN) AT1G16180 Solyc03g117780.2 1068 1621 1530 1481 1756 1537 1676 1956 1384 1262 1124 1630 1724 1628 1189 Ubiquitin receptor RAD23c (AHRD V3.3 *-* A0A2G3CZQ8_CAPCH) AT1G79650 Solyc03g117790.2 21 13 13 9 3 5 13 5 9 9 13 7 2 4 6 Serine/threonine-protein kinase OSR1 (AHRD V3.3 *** A0A2G2WQC6_CAPBA) AT1G79640 Solyc03g117800.4 775 480 592 633 35 49 34 40 349 502 700 383 576 665 1571 Protein ECERIFERUM 3 (AHRD V3.3 *** A0A2G2WQK1_CAPBA) Solyc03g117810.4 311 250 270 255 254 193 179 110 284 211 256 183 312 261 288 Phosphate ABC transporter ATP-binding protein PstB (AHRD V3.3 *** A0A365XJ19_9ACTN) Solyc03g117820.1 241 267 254 220 205 227 258 183 174 162 209 189 208 274 213 transcriptional regulator of RNA polII%2C SAGA%2C subunit (AHRD V3.3 *** AT2G24530.2) AT2G24530 Solyc03g117830.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g117840.4 86 56 86 91 26 30 41 25 59 77 62 39 73 63 354 elongation factor (AHRD V3.3 *** AT5G43150.1) Solyc03g117845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc03g117850.4 420 302 353 287 226 190 203 179 211 224 244 152 285 273 276 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (AHRD V3.3 *** A0A2G2WQM5_CAPBA) Solyc03g117860.3 895 575 385 120 37 32 28 20 135 615 456 54 868 257 131 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3A2R7_CAPAN) Solyc03g117870.3 1154 4574 2414 2859 7619 7004 7289 7931 4816 8725 2965 6645 2819 3270 1605 4-coumarate:CoA ligase (AHRD V3.3 *** Q42879_LITER) AT3G21240 Solyc03g117880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g117890.3 686 478 630 532 460 490 455 451 757 839 1008 595 313 434 1259 ACT domain-containing protein (AHRD V3.3 *** A0A2U1QDU0_ARTAN) AT1G16880 Solyc03g117900.3 171 195 283 251 252 328 323 236 181 177 265 275 291 298 313 Cytochrome C oxidase assembly factor (AHRD V3.3 *** Q8GWM1_ARATH) AT1G10865 Solyc03g117910.3 17 11 17 11 3 15 17 18 5 8 8 26 14 3 12 FRIGIDA-like protein (AHRD V3.3 *-* A0A2G3CZJ3_CAPCH) AT4G00650 Solyc03g117920.1 4 14 0 6 3 21 12 16 2 4 4 22 17 8 11 FRIGIDA-like protein (AHRD V3.3 *** A0A2G2V8I5_CAPBA) Solyc03g117930.4 737 780 656 531 572 555 405 644 611 815 489 776 717 684 616 FRIGIDA-like protein (AHRD V3.3 *** A0A2G3A2S4_CAPAN) Solyc03g117940.3 2055 2594 2645 2032 2489 2376 2171 2518 1980 1936 1813 2120 2828 2503 2071 U2 small nuclear ribonucleoprotein A (AHRD V3.3 *** A0A2G2V8K0_CAPBA),Pfam:PF14580 AT1G09760 Solyc03g117950.3 1002 636 728 764 535 585 588 498 642 821 903 535 695 659 764 ATP-dependent Clp protease ATP-binding subunit-like protein chloroplastic (AHRD V3.3 *** A0A2P6U503_CHLSO) AT5G51070 Solyc03g117955.1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 Unknown protein Solyc03g117960.4 57 84 133 91 109 133 131 118 101 74 64 103 119 148 34 Forkhead-associated domain-containing protein / FHA domain-containing protein (AHRD V3.3 *** A0A2U1Q1M6_ARTAN) AT5G07400 Solyc03g117970.4 1160 1251 840 975 1290 1229 1323 1437 1266 1042 906 1306 1225 1246 736 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A1U8F7L8_CAPAN) AT2G31320 Solyc03g117980.3 3672 1989 4023 2428 358 417 360 288 2374 2855 3900 1652 1843 2854 4027 whitefly-induced gp91-phox AT5G47910 Solyc03g117990.1 31 34 86 108 98 123 142 94 65 63 90 103 67 81 44 hypothetical protein (AHRD V3.3 *** AT5G07380.4) AT5G07380 Solyc03g118000.1 4 3 20 6 2 9 8 4 1 3 6 6 2 6 10 Inositol polyphosphate multikinase (AHRD V3.3 *** A0A2G3CZI1_CAPCH) AT5G61760 Solyc03g118005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g118010.4 1300 1525 962 1017 929 891 963 1123 1319 1141 1097 1093 1424 1384 1234 Nuclease domain-containing protein 1-like (AHRD V3.3 *** A0A2K3NZ95_TRIPR) AT5G07350 Solyc03g118020.3 2531 4524 2762 2641 2733 2849 2986 3096 3826 2605 2506 2822 6340 5032 4161 Nuclease domain-containing protein 1-like (AHRD V3.3 *** A0A2K3NZ95_TRIPR) AT5G07350 Solyc03g118030.3 1155 941 1018 953 921 922 944 944 974 1071 957 921 1088 1018 952 Glutamyl-tRNA(Gln) amidotransferase subunit A (AHRD V3.3 *** A0A2K3P380_TRIPR) AT5G07360 Solyc03g118040.3 4227 6566 4093 2845 5242 4606 4725 5804 4183 4315 3613 5941 11577 7635 4657 calnexin AT5G61790 Solyc03g118050.3 73 22 68 92 10 0 2 3 28 62 34 16 46 75 302 NFU1 iron-sulfur cluster protein (AHRD V3.3 *** AT5G07330.1) AT5G07330 Solyc03g118060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NFU1 iron-sulfur cluster protein (AHRD V3.3 *** AT5G07330.1) Solyc03g118070.3 415 282 307 294 228 262 268 252 245 269 240 250 273 302 381 Sucrose nonfermenting 4-like protein (AHRD V3.3 *** A0A2G2XRA5_CAPBA) Solyc03g118080.4 63 112 112 148 73 157 111 105 94 66 109 118 136 180 161 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A2U7_CAPAN) AT5G61800 Solyc03g118090.3 50 104 219 231 160 235 228 152 142 106 248 151 138 110 126 Mitochondrial substrate carrier family protein (AHRD V3.3 *** F4KBU1_ARATH) AT5G51050 Solyc03g118100.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1N555_ARTAN) Solyc03g118120.3 202 574 1082 751 1307 1304 1145 1022 762 603 1155 944 362 616 670 Transferring glycosyl group transferase (AHRD V3.3 *** A0A2K3L539_TRIPR) Solyc03g118130.3 450 1003 1280 1004 1329 1190 1393 1706 996 1120 1290 1266 918 809 786 Rubredoxin (AHRD V3.3 *** A0A2K3LH61_TRIPR) AT5G51010 Solyc03g118135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g118140.3 89 35 114 63 105 138 142 103 39 46 75 103 63 76 108 Protein kish (AHRD V3.3 *** A0A2G3A2X8_CAPAN) AT5G20165 Solyc03g118150.3 636 870 1751 1034 2013 2249 1771 1858 1119 910 1246 1446 931 1084 944 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1PFN3_ARTAN) AT1G01630 Solyc03g118160.3 1474 861 1642 988 1318 1661 1210 1454 707 1471 1004 1812 394 983 908 falsiflora Solyc03g118170.3 812 1116 1197 1176 804 748 786 1156 1773 1068 1257 1500 1277 1318 1147 Glycine--tRNA ligase (AHRD V3.3 *** A0A2G3A2W4_CAPAN) Solyc03g118180.3 178 126 123 90 131 107 123 93 110 106 120 99 135 160 132 E3 ubiquitin-protein ligase ORTHRUS 2 (AHRD V3.3 *-* A0A2G2WQ73_CAPBA) Solyc03g118190.4 289 133 140 38 9 5 6 5 103 61 169 56 92 243 337 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3CZ32_CAPCH) AT5G61890 Solyc03g118200.4 926 688 1227 821 709 831 759 670 683 1132 1214 749 629 690 644 Calcium-dependent phospholipid-binding Copine family protein (AHRD V3.3 *** A0A2U1NDK1_ARTAN) AT5G61900 Solyc03g118210.3 4 35 85 31 45 50 42 29 18 18 39 39 19 22 5 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *-* Q683G3_ARATH) Solyc03g118220.3 27 94 77 96 163 96 126 186 114 82 59 90 64 100 13 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1M8Q5_ARTAN) Solyc03g118230.3 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 trihelix transcription factor ASR3-like (AHRD V3.3 *** A0A2I4FCD1_9ROSI) Solyc03g118240.4 645 1045 571 858 1287 1111 1179 1589 1059 1062 681 1140 835 766 581 Magnesium-protoporphyrin IX methyltransferase (AHRD V3.3 *** A0A1P8B4G1_ARATH) AT4G25080 Solyc03g118250.4 316 254 223 195 143 164 139 139 182 161 247 169 247 305 316 mRNA cap guanine-N7 methyltransferase (AHRD V3.3 *** A0A2G3CZT9_CAPCH) AT3G20650 Solyc03g118255.1 5 3 0 0 0 0 0 0 2 1 17 0 0 1 3 Unknown protein Solyc03g118260.3 239 191 326 207 177 199 233 152 225 184 251 109 182 180 213 Adp-ribosylation factor gtpase-activating protein agd3 (AHRD V3.3 *** A0A1J6J465_NICAT) Solyc03g118270.1 851 2028 1480 1645 2515 2232 2034 2785 2292 2109 1665 2123 1594 1665 1161 GDP-mannose 4,6-dehydratase (AHRD V3.3 *** A0A2G3CZP5_CAPCH) AT5G66280 Solyc03g118280.1 159 169 158 175 223 189 173 209 229 150 150 174 199 189 239 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R3T1_9MAGN) AT5G61990 Solyc03g118290.3 6622 5937 4843 4245 5928 5476 5418 6121 7586 6460 5347 7471 4122 5561 4708 auxin response factor 2A AT5G62000 Solyc03g118300.1 709 451 1046 1064 869 914 1076 566 427 495 1094 673 508 687 945 Unknown protein Solyc03g118305.1 7 11 30 26 29 20 16 11 7 8 40 7 10 18 18 Unknown protein Solyc03g118310.4 75 137 176 207 166 238 170 213 169 56 79 206 20 130 64 bHLH transcription factor 083 AT3G26744 Solyc03g118320.1 179 258 238 170 389 302 280 366 247 118 100 289 169 252 96 Recombination factor protein RarA (AHRD V3.3 *** A0A347ZAE4_LACPN) AT1G24290 Solyc03g118330.3 8 13 9 28 7 8 6 9 17 16 12 5 18 16 42 Receptor-like protein kinase (AHRD V3.3 *-* A0A2R6P698_ACTCH) Solyc03g118340.3 516 1056 776 700 675 783 858 814 985 629 669 800 812 1024 848 ATP-dependent Clp protease ATP-binding subunit ClpC (AHRD V3.3 *** A0A327YAA3_9BACI) AT5G50920 Solyc03g118350.4 991 1165 1200 1213 1234 1428 1411 1227 1184 880 1329 982 982 1184 1338 Dual specificity protein phosphatase PHS1 (AHRD V3.3 *** A0A2G3CZP6_CAPCH) AT5G23720 Solyc03g118360.2 0 1 8 1 3 3 3 0 2 2 1 0 2 3 0 ATP-dependent Clp protease ATP-binding subunit ClpC (AHRD V3.3 *-* A0A2U1EEN6_9MICO) Solyc03g118370.3 144 253 481 532 358 483 423 371 470 192 656 264 218 287 307 Carboxypeptidase (AHRD V3.3 *** A0A2G3CZU5_CAPCH) AT1G28110 Solyc03g118380.3 1015 434 590 400 472 449 442 543 475 551 480 562 399 448 436 DNA-directed RNA polymerase ii subunit rpb7-like protein (AHRD V3.3 *** A0A2K3MTA8_TRIPR) AT4G14660 Solyc03g118390.3 817 965 771 748 869 765 755 903 836 798 631 690 864 867 820 Coiled-coil domain-containing protein SCD2 (AHRD V3.3 *** A0A2G3CZS6_CAPCH) AT3G48860 Solyc03g118400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g118410.3 341 1287 854 800 1227 1166 1282 1255 1150 533 765 928 645 832 673 Acyl carrier protein (AHRD V3.3 *** A0A1U8G884_CAPAN) Solyc03g118420.4 1492 944 966 816 617 663 561 624 1024 1409 1082 706 1108 1024 1030 NF-X1-type zinc finger protein NFXL1 (AHRD V3.3 *** A0A2G3CZS2_CAPCH) AT1G10170 Solyc03g118430.3 2653 2160 1437 1716 1578 1438 1672 1775 2122 2013 1468 1615 1573 1776 1852 Peptidase M16 (AHRD V3.3 *** A0A200QEF2_9MAGN) AT5G42390 Solyc03g118440.3 2 6 25 2 2 21 16 17 10 6 5 5 15 3 2 knotted 1-binding protein (AHRD V3.3 *** AT5G03050.2) AT5G03050 Solyc03g118450.1 32 18 16 5 0 3 2 0 7 12 28 4 13 16 2 Unknown protein Solyc03g118470.4 1171 873 949 491 163 139 135 90 244 259 4086 699 580 426 1223 Nudix hydrolase 4 (AHRD V3.3 *** A0A2G3CZQ7_CAPCH) Solyc03g118480.4 38 203 209 217 449 537 429 579 294 162 283 342 57 127 104 Zinc-finger domain of monoamine-oxidase A repressor R1 (AHRD V3.3 *** A0A2U1LDY5_ARTAN) Solyc03g118490.4 35 85 59 55 135 129 102 99 58 60 67 66 33 83 24 Zinc-finger domain of monoamine-oxidase A repressor R1 (AHRD V3.3 *** A0A2U1LDY5_ARTAN) Solyc03g118500.3 1012 801 987 1032 917 956 1054 804 731 717 947 870 748 925 838 Chaperone protein DnaJ (AHRD V3.3 *** A0A1J3JVS7_NOCCA) AT3G17830 Solyc03g118510.3 1049 3107 3958 3397 3973 4244 4586 3907 3797 2282 3467 3701 3055 3171 2386 Ovary receptor kinase 27 (AHRD V3.3 *** S4WIQ7_SOLCH) AT1G48480 Solyc03g118520.4 331 370 226 295 320 274 283 392 301 377 227 292 401 297 182 ATP-dependent helicase/deoxyribonuclease subunit B (AHRD V3.3 *-* AT3G51610.1) Solyc03g118530.3 2713 1845 1455 1475 1736 1612 1458 1870 1906 2186 1488 1871 1620 1727 1472 Protein kinase domain (AHRD V3.3 *** A0A200QLB1_9MAGN) AT3G17850 Solyc03g118540.4 546 693 565 472 619 484 467 638 420 767 639 852 574 690 585 Jasmonate ZIM domain protein e (AHRD V3.3 *-* I3WTA3_NICAT) AT3G17860 Solyc03g118550.3 1156 1182 1249 1200 1393 1134 1181 1306 1585 1486 967 1484 1596 1232 960 TPR repeat-containing thioredoxin TDX (AHRD V3.3 *** A0A2G2WQA5_CAPBA) AT3G17880 Solyc03g118560.1 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 Thioredoxin (AHRD V3.3 *** A0A1J3DHI9_NOCCA) Solyc03g118570.4 268 259 278 302 266 331 300 233 300 223 280 254 256 295 249 Geranylgeranyl transferase type-2 subunit beta (AHRD V3.3 *** A0A2G2WQD8_CAPBA) AT5G12210 Solyc03g118580.3 0 0 0 0 0 0 1 2 3 0 0 5 0 1 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *-* Q1PFD8_ARATH) AT1G18280 Solyc03g150160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *-* A0A1U8F0H8_CAPAN) Solyc03g118610.4 450 549 692 568 583 569 672 544 463 404 568 483 574 613 636 SURF1-like protein (AHRD V3.3 *** A0A2G3CZS7_CAPCH) AT3G17910 Solyc03g118620.3 1536 810 1035 950 863 1051 963 791 909 1070 812 762 598 861 1190 Outer arm dynein light chain 1 protein (AHRD V3.3 *-* A0A2U1P5K0_ARTAN) AT1G48540 Solyc03g118630.3 109 132 247 165 242 282 201 169 161 119 262 176 155 103 202 transmembrane protein (AHRD V3.3 *** AT3G17950.1) AT3G17950 Solyc03g118640.3 849 927 768 1106 1063 932 1101 1173 1420 896 988 898 840 1197 1207 Ketose-bisphosphate aldolase class-II family protein (AHRD V3.3 *** Q8VYC5_ARATH) AT1G18270 Solyc03g118650.3 450 665 936 669 909 693 720 944 1193 851 864 1033 846 824 701 Aldose 1-epimerase (AHRD V3.3 *** A0A2G3A308_CAPAN) AT3G17940 Solyc03g118660.3 653 408 477 405 229 323 374 315 314 429 386 326 495 401 487 Down syndrome critical region protein 3-like protein (AHRD V3.3 *** A0A1J3H0S9_NOCCA) AT1G48550 Solyc03g118670.3 1478 1114 809 721 776 731 638 845 1026 1009 662 866 900 851 829 ERAD-associated E3 ubiquitin-protein ligase component HRD3A (AHRD V3.3 *** A0A1J3CQU4_NOCCA) AT1G18260 Solyc03g118680.3 834 1148 872 799 798 741 791 762 802 608 608 883 1273 1181 839 Zinc finger protein VAR3, chloroplastic (AHRD V3.3 *** A0A2G2WQC9_CAPBA) AT1G48570 Solyc03g118690.4 807 1265 802 791 883 768 865 856 879 646 786 769 1417 1319 1032 Amidase (AHRD V3.3 *** A0A200PTZ2_9MAGN) AT3G17970 Solyc03g118700.3 227 253 263 321 249 283 337 246 195 226 225 293 196 285 261 nuclear localized protein (AHRD V3.3 *-* AT1G48580.3) AT1G48580 Solyc03g118710.3 259 149 169 141 86 87 95 46 112 171 159 99 145 131 209 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LMA8_ARTAN) AT3G17980 Solyc03g118720.3 79 105 110 151 122 84 99 93 94 96 103 69 115 122 80 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LMA8_ARTAN) AT3G17980 Solyc03g118740.3 415 876 646 800 1185 1008 943 1153 1542 609 848 1239 645 997 650 SlPIN1 AT1G73590 Solyc03g118750.4 309 486 505 671 517 683 723 617 800 337 495 439 456 601 707 phosphoethanolamine N-methyltransferase AT1G48600 Solyc03g118760.4 0 0 0 5 5 2 2 6 9 5 3 5 4 4 31 Tubulin beta chain (AHRD V3.3 *** A0A1U8F7H6_CAPAN) Solyc03g118770.4 476 306 567 550 191 181 127 126 159 317 179 383 49 318 215 WUSCHEL-related homeobox 6 (AHRD V3.3 *** A0A2G3A315_CAPAN) AT3G18010 Solyc03g118780.3 582 8409 9361 7582 16070 13296 13229 13692 7913 4234 7851 10926 6965 8359 4431 Thaumatin-like protein (AHRD V3.3 *** A0A2G2WQ90_CAPBA) AT1G73620 Solyc03g118790.3 92 75 44 60 73 50 76 90 65 50 50 84 42 72 99 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A340_CAPAN) AT3G18020 Solyc03g118800.3 16355 13274 12323 13012 12113 10866 11845 14102 8925 14948 11727 14607 13216 12674 11125 RNA binding protein (AHRD V3.3 *-* A0A1T3CGB7_9HYPO) AT2G18510 Solyc03g118810.1 835 625 2014 469 428 298 289 364 308 930 1821 588 799 466 631 Calcium-binding allergen Ole e 8 (AHRD V3.3 *** A0A2G2WQF6_CAPBA) AT1G18210 Solyc03g118820.4 33 11 46 39 1 2 9 1 10 16 17 4 16 24 49 Ras-related protein RABA6a (AHRD V3.3 *** A0A1U8FCD3_CAPAN) AT1G73640 Solyc03g118830.3 600 518 445 543 555 614 582 619 483 541 461 508 510 464 362 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) (AHRD V3.3 *** F4IAN4_ARATH) AT1G73650 Solyc03g118840.3 1104 1426 1175 1759 1844 1386 1501 1966 1456 1917 1143 1676 1098 1162 849 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NS86_ARTAN) AT1G73760 Solyc03g118850.4 84 58 33 84 98 105 107 86 61 70 92 37 110 72 164 Alpha/beta hydrolase family protein (AHRD V3.3 *** Q8W568_ARATH) AT1G73750 Solyc03g118860.3 396 593 537 665 706 584 776 697 643 659 802 693 514 638 648 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (AHRD V3.3 *** A0A1J3I8H5_NOCCA) AT1G73740 Solyc03g118870.4 0 3 9 0 3 16 4 0 10 1 10 4 0 0 0 Octicosapeptide/Phox/Bem1p family protein (AHRD V3.3 *** A0A2K3L5A6_TRIPR) Solyc03g118880.3 88 40 107 217 20 24 25 18 37 51 54 43 74 92 115 Unknown protein Solyc03g118890.4 2213 1247 1104 925 807 818 817 793 1038 1131 902 1029 1075 1222 1072 Protein phosphatase 2C (PP2C)-like domain (AHRD V3.3 *** A0A200QVQ5_9MAGN) AT1G18030 Solyc03g118900.3 9 12 4 8 11 3 17 6 14 9 13 11 9 1 12 WAT1-related protein (AHRD V3.3 *** K4BM39_SOLLC) AT3G18200 Solyc03g118910.1 3668 4620 2675 2168 2789 2413 2314 3365 2964 2924 2052 3233 3716 3501 2859 T-complex protein 1 subunit delta (AHRD V3.3 *** A0A2G3CZV5_CAPCH) AT3G18190 Solyc03g118920.3 1563 1686 1412 1522 1188 1499 1528 1345 1420 1090 1023 1165 1580 1797 1801 Helicase (AHRD V3.3 *** A0A200Q327_9MAGN) AT1G48650 Solyc03g118930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** Q9LV22_ARATH) AT3G18180 Solyc03g118940.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** Q5QPZ0_MAIZE) Solyc03g118950.3 5 0 0 1 0 1 1 0 0 0 4 1 0 8 4 Double-stranded RNA-binding domain (AHRD V3.3 *-* A0A200Q5Z7_9MAGN) Solyc03g118960.3 4 0 14 10 7 0 0 5 2 2 6 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4FHR9_9ROSI) Solyc03g118970.3 1610 1300 1271 771 639 647 617 771 699 1291 879 965 1169 973 804 Protein DETOXIFICATION (AHRD V3.3 *** A0A1J7HGK7_LUPAN) AT5G52450 Solyc03g118980.2 209 127 76 118 129 97 108 91 97 72 64 111 167 125 206 Elongation factor 1-alpha C (AHRD V3.3 *-* A0A2I0VCV4_9ASPA) Solyc03g119010.3 3016 2049 2465 1848 1711 2020 1651 1689 2190 1666 2085 2111 1886 1995 2140 Pre-mRNA-splicing factor SPF27-like protein (AHRD V3.3 *** A0A2G3CZW4_CAPCH) AT3G18165 Solyc03g119020.2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g119030.4 977 1071 1022 1068 1009 985 1144 964 1127 889 954 883 1168 1106 1058 Peroxin-3 (AHRD V3.3 *** A0A2U1LRY0_ARTAN) AT1G48635 Solyc03g119040.3 3314 7824 6360 4991 7060 7354 7222 6914 4788 3757 4375 5686 7877 6742 4660 LeArcA2 protein containing 7 WD40 repeats AT1G18080 Solyc03g119050.4 468 541 396 423 308 512 458 334 495 327 398 385 486 754 564 SANT/Myb domain (AHRD V3.3 *-* A0A200PR03_9MAGN) AT3G18100 Solyc03g119060.3 5066 3766 3974 4789 1288 1300 1252 1194 5198 2600 2827 2159 6613 7026 9117 divaricata AT1G73680 Solyc03g119070.2 3 130 141 110 168 200 212 202 119 96 84 163 48 123 37 exonuclease 1 (AHRD V3.3 *** A0A2I4FDC1_9ROSI) AT1G18090 Solyc03g119080.4 2122 5648 4720 6709 2521 2081 2359 2427 14835 7227 6087 3852 10043 6284 8231 beta-mannosidase enzyme AT3G18080 Solyc03g119090.3 711 839 835 741 878 866 869 901 850 762 786 753 857 747 1040 Transducin/WD40 repeat protein (AHRD V3.3 *** A0A2K3NUS3_TRIPR) AT3G18060 Solyc03g119100.2 17 2 0 14 0 0 0 0 0 1 0 0 0 0 0 FLOWERING LOCUS T/ TERMINAL FLOWER 1-like protein (AHRD V3.3 *** Q6L5N9_POPNI) AT1G18100 Solyc03g119110.4 778 1230 877 890 1661 1468 1418 1886 1446 1202 1109 1424 882 833 429 GPI-anchored protein (AHRD V3.3 *** AT3G18050.1) AT3G18050 Solyc03g119120.3 27 83 68 71 50 87 72 60 84 30 59 63 50 98 72 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WQH4_CAPBA) AT4G02750 Solyc03g119130.3 8058 13496 7426 10140 14825 12484 11709 18061 12158 12115 7342 14491 10630 10697 5430 HMG-Y-related protein A (AHRD V3.3 *-* A0A1J3HLT7_NOCCA) AT3G18035 Solyc03g119140.4 762 600 439 547 543 532 590 472 582 547 576 327 648 598 672 MAP kinase kinase kinase 30 AT1G73660 Solyc03g119150.4 140 158 243 257 210 234 301 195 313 272 280 206 105 213 316 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G3D014_CAPCH) AT1G18170 Solyc03g119160.3 262 246 276 202 151 162 181 187 183 183 252 199 259 367 371 Ribosomal protein S24/S35 (AHRD V3.3 *-* A0A2U1PXL2_ARTAN) Solyc03g119170.3 1778 1912 1821 1586 1597 1659 1584 1436 1373 1104 1395 1446 1972 2068 1535 Ribosomal protein S24/S35 (AHRD V3.3 *** A0A1P8B5A6_ARATH) AT3G18240 Solyc03g119180.1 7 3 20 24 5 3 8 6 7 6 32 0 28 14 10 Unknown protein Solyc03g119190.3 30 19 117 65 51 52 41 18 34 32 130 16 30 43 88 Reticulon-like protein (AHRD V3.3 *** A0A2G3D000_CAPCH) AT3G18260 Solyc03g119200.4 407 216 162 297 260 174 160 235 262 325 169 233 159 213 371 L-Ala-D/L-amino acid epimerase (AHRD V3.3 *** A0A1U8FVL6_CAPAN) AT3G18270 Solyc03g119210.1 834 966 2669 2290 1347 1024 1635 1108 1794 1075 2383 791 2034 1723 3866 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain (AHRD V3.3 *** A0A200Q3B5_9MAGN) AT3G18280 Solyc03g119220.3 136 1000 1164 1377 2528 2399 2368 2835 1305 595 1026 1463 195 691 683 Kinesin-like protein (AHRD V3.3 *** A0A2G3CZZ7_CAPCH) AT1G18370 Solyc03g119230.1 30 14 8 1 12 4 12 18 13 15 1 9 16 12 0 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1LHR5_ARTAN) Solyc03g119240.3 121 55 74 37 28 36 31 35 32 39 34 22 84 56 43 Protein kinase family protein (AHRD V3.3 *** A0A2U1MH78_ARTAN) AT1G18390 Solyc03g119250.4 2308 626 1208 447 89 76 58 67 236 480 3094 302 1008 1098 1110 Calmodulin binding protein-like (AHRD V3.3 *** A0A200Q136_9MAGN) AT1G73805 Solyc03g119260.4 27 13 29 29 14 22 27 18 23 33 17 14 21 19 9 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MN76_TRIPR) AT1G68390 Solyc03g119270.1 483 427 557 345 523 398 369 434 535 395 354 408 326 470 484 AP-3 complex subunit delta (AHRD V3.3 *** A0A1U8FWE5_CAPAN) AT1G48760 Solyc03g119280.3 412 716 406 726 665 669 762 704 643 676 519 702 620 781 629 Histidine--tRNA ligase (AHRD V3.3 *** A0A1J3HAZ7_NOCCA),Pfam:PF13393 AT3G46100 Solyc03g119290.3 440 475 541 549 550 683 637 727 567 393 521 525 442 622 566 Elongation factor (AHRD V3.3 *** A0A200R8C0_9MAGN) AT5G10630 Solyc03g119300.4 2691 1143 971 1065 663 775 769 641 980 1326 956 1006 915 990 1148 Zinc finger protein (AHRD V3.3 *** A0A200QRC0_9MAGN) AT3G18290 Solyc03g119310.3 336 407 657 435 598 477 374 654 551 477 464 819 870 766 300 Unknown protein Solyc03g119320.1 691 460 591 646 450 472 327 428 654 621 834 875 708 730 806 hypothetical protein (AHRD V3.3 *** AT1G48780.1) Solyc03g119330.3 1072 787 765 808 862 765 877 844 962 919 816 772 839 750 839 AMSH-like ubiquitin thioesterase 1 (AHRD V3.3 *** A0A2G3CZY1_CAPCH) AT1G48790 Solyc03g119340.3 162 124 140 180 135 106 118 121 111 90 209 135 133 90 100 Cysteine-rich receptor-like protein kinase 8 (AHRD V3.3 *** A0A2G3A3B2_CAPAN) Solyc03g119350.3 4 11 60 46 12 36 22 21 20 28 21 49 20 36 10 peptidase M50B-like protein (AHRD V3.3 *** AT1G67060.1),Pfam:PF13398 AT1G67060 Solyc03g119360.3 2664 6097 5480 4469 5062 5200 5334 4886 3628 3283 3968 3868 7045 5786 5436 40S ribosomal protein S7 (AHRD V3.3 *-* A0A2G3D0S9_CAPCH) AT1G48830 Solyc03g119370.2 4 18 2 6 0 3 2 1 16 11 32 2 7 23 7 R2R3MYB transcription factor 62 Solyc03g119380.3 446 600 688 698 754 796 750 682 639 526 750 593 755 617 714 50S ribosomal protein L14 (AHRD V3.3 *** A0A1U8DV28_CAPAN) AT5G46160 Solyc03g119390.4 70 41 109 50 8 9 11 1 36 23 85 10 12 85 463 bHLH transcription factor 026 AT1G18400 Solyc03g119400.3 1798 1718 1451 1568 1285 1527 1428 1537 1703 1832 1706 1778 1896 1672 1772 DUF639 domain-containing protein (AHRD V3.3 *** A0A1Q3DCR6_CEPFO) AT1G48840 Solyc03g119410.1 0 0 9 0 0 0 0 0 0 0 4 0 0 0 0 VQ motif-containing protein 8, chloroplastic (AHRD V3.3 *** A0A2G2WPJ8_CAPBA) AT1G68450 Solyc03g119420.3 437 413 477 350 419 399 368 416 399 403 384 360 563 475 428 Fe-S cluster assembly protein DRE2 (AHRD V3.3 *** A0A2G2XLV2_CAPBA) AT5G18400 Solyc03g119430.4 678 595 728 587 630 832 680 555 564 415 763 611 615 639 803 Zinc finger transcription factor 30 AT3G47120 Solyc03g119440.3 1142 890 909 643 442 431 441 394 746 851 1047 408 1428 782 717 C2 domain-containing protein (AHRD V3.3 *** A0A1Q3BN33_CEPFO) AT3G18370 Solyc03g119450.3 1032 1002 986 921 966 983 1020 1173 1397 974 779 1043 881 1222 877 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A1J3K5U5_NOCCA) AT3G18390 Solyc03g119460.4 12801 9369 8849 9779 9360 9487 8823 10480 7568 10279 9044 10461 7616 8328 8351 Cleavage stimulating factor 64 (AHRD V3.3 *-* A0A1J3GQ83_NOCCA) AT1G73840 Solyc03g119470.2 22 42 53 46 17 28 26 18 30 38 40 26 21 45 69 DUF1666 domain-containing protein (AHRD V3.3 *** A0A1Q3CZB6_CEPFO) AT1G73850 Solyc03g119480.4 444 314 308 318 296 279 247 256 261 320 347 245 255 242 368 hypothetical protein (AHRD V3.3 *** AT3G02555.2) Solyc03g119485.1 9 1 10 3 5 5 3 9 9 7 12 7 1 7 0 Unknown protein Solyc03g119490.4 197 659 749 817 1392 1064 1075 1199 643 478 666 949 410 651 464 MAP kinase kinase 3 AT5G56580 Solyc03g119500.1 9 0 0 6 0 0 0 0 5 2 12 5 7 2 0 F-box domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *** A0A2U1LBL4_ARTAN) Solyc03g119510.3 14 29 30 17 25 6 8 6 21 10 18 14 41 48 27 Unknown protein Solyc03g119520.4 1431 1063 1793 1052 954 913 1050 612 852 1226 2727 989 772 1027 1493 BnaC05g48200D protein (AHRD V3.3 *** A0A078HZC2_BRANA) Solyc03g119530.3 719 753 2551 559 1029 1001 1385 921 820 1144 2530 880 904 996 843 LOB domain-containing protein 41 (AHRD V3.3 *** A0A2G2WPK9_CAPBA) Solyc03g119540.3 240 285 92 317 109 129 111 96 375 152 128 24 199 74 380 Zinc finger protein (AHRD V3.3 *** A0A200Q3F7_9MAGN) Solyc03g119550.3 6 44 83 54 44 51 41 38 164 98 80 100 40 60 36 lysM domain-containing GPI-anchored protein 1-like (AHRD V3.3 *** A0A2I4FE18_9ROSI) Solyc03g119560.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A2K3MDL6_TRIPR) Solyc03g119570.3 796 513 423 451 294 282 384 346 328 381 467 324 391 518 460 Carbon catabolite repressor protein 4-like protein 5 (AHRD V3.3 *** A0A1J3I9F8_NOCCA) AT1G73875 Solyc03g119580.1 240 164 187 145 84 97 76 70 78 91 194 110 190 164 301 Solanum lycopersicum Cytokinin Response Factor 9 Solyc03g119590.1 1801 1411 1614 325 13 20 34 9 483 1320 1562 72 6694 2078 1429 NIMIN2c protein (AHRD V3.3 *** A0FJY4_TOBAC) Solyc03g119600.1 1340 829 827 635 376 361 414 228 574 700 1037 293 2054 935 970 NIMIN2b protein (AHRD V3.3 *** Q0MR95_TOBAC) Solyc03g119610.1 954 1708 1884 1889 3129 3215 3565 2782 2988 2084 2964 2569 1923 1830 1573 hypothetical protein (AHRD V3.3 *** AT1G13360.1) AT1G13360 Solyc03g119620.1 12 25 39 49 14 47 18 15 23 29 22 31 40 16 21 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** Q9C9B1_ARATH) AT1G73890 Solyc03g119630.4 44 56 178 103 68 101 62 34 37 42 95 28 82 55 198 Unknown protein Solyc03g119640.4 446 492 681 533 680 680 646 556 641 758 611 788 549 624 523 Aluminum-activated malate transporter-like (AHRD V3.3 *** K4BMB3_SOLLC) AT3G18440 Solyc03g119650.3 3500 2965 2635 2465 2529 2495 2670 3026 3236 3087 2321 2747 2752 3079 2644 DENN domain and WD repeat-containing protein SCD1 (AHRD V3.3 *** A0A2G2WPL9_CAPBA) AT1G49040 Solyc03g119660.2 65 35 69 16 17 2 7 9 120 85 136 12 58 35 13 Protein PLANT CADMIUM RESISTANCE like (AHRD V3.3 *** A0A2R6QIE9_ACTCH) Solyc03g119670.3 23 22 20 27 18 13 22 22 15 20 42 16 18 19 13 Protein CASP (AHRD V3.3 *-* A0A2G3C984_CAPCH) Solyc03g119690.3 5910 5172 3266 4123 3264 3272 2616 3347 4403 4866 4120 4384 4157 3806 3680 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** Q9C6M0_ARATH) AT3G18490 Solyc03g119700.3 2161 1417 1272 1731 1698 1593 1568 1508 1501 1763 1454 1436 1387 1127 2211 ATP-dependent Clp protease adapter protein ClpS (AHRD V3.3 *** A0A1U8FUF1_CAPAN) AT1G68660 Solyc03g119710.4 679 535 461 484 483 464 508 439 469 603 393 399 498 533 475 carbon catabolite repressor protein 4 homolog 3 (AHRD V3.3 *** A0A2I4F188_9ROSI) AT3G18500 Solyc03g119720.4 619 444 426 443 633 601 562 557 533 692 603 524 541 490 635 Lipase (AHRD V3.3 *** A0A2K3PIZ1_TRIPR) AT1G73920 Solyc03g119723.1 159 152 130 135 160 176 199 161 139 109 195 121 154 170 127 Unknown protein AT3G18510 Solyc03g119727.1 15 27 2 16 28 17 36 40 29 20 13 19 17 10 5 Unknown protein Solyc03g119730.3 877 939 776 739 810 863 798 955 912 862 622 951 662 739 598 Histone deacetylase (AHRD V3.3 *** A0A2G3A3A8_CAPAN) AT3G18520 Solyc03g119740.3 905 1689 1128 1615 2525 2349 2166 2289 1644 1237 1126 1327 1502 1043 1178 Transcription factor DIVARICATA (AHRD V3.3 *** A0A1U8FVE8_CAPAN) AT1G49010 Solyc03g119750.4 854 1155 847 1095 1091 1321 1246 1203 1130 1058 817 867 1054 1084 908 polarity axis stabilization protein (AHRD V3.3 *** AT1G73930.2) AT1G73930 Solyc03g119760.3 1781 876 737 900 657 676 558 695 885 1302 959 1152 687 787 803 Transmembrane Fragile-X-F-associated protein (AHRD V3.3 *** A0A2U1NH40_ARTAN) AT1G18470 Solyc03g119770.4 579 248 355 302 178 205 142 215 519 428 697 266 183 197 62 branched1a AT3G18550 Solyc03g119780.4 2404 1973 2631 2290 1893 2399 2425 1964 2397 1752 2347 1783 1821 2574 2742 Transcription initiation factor TFIID subunit 2 (AHRD V3.3 *** A0A2G3A3D3_CAPAN) AT1G73960 Solyc03g119790.3 787 915 683 593 676 684 671 754 880 522 544 492 944 930 729 Transcription factor TFIIE, alpha subunit (AHRD V3.3 *** A0A2U1NPV3_ARTAN) AT1G03280 Solyc03g119800.3 1 2 0 0 0 0 0 4 0 1 4 0 0 0 8 Ethylene-responsive transcription factor LEP (AHRD V3.3 *** A0A2G3D147_CAPCH) Solyc03g119810.1 208 83 11 31 6 17 3 11 39 70 34 27 35 28 52 At1g49000 (AHRD V3.3 *-* Q9M9A2_ARATH) AT1G49000 Solyc03g119820.1 923 378 174 185 514 459 448 424 186 548 263 369 64 229 553 Oleosin (AHRD V3.3 *** A0A200Q8I2_9MAGN) AT3G18570 Solyc03g119830.4 91 163 209 160 243 235 344 222 153 126 132 148 169 126 182 BED zinc finger, hAT family dimerization domain protein (AHRD V3.3 *** A0A2U1NNW9_ARTAN) AT1G18560 Solyc03g119840.3 232 116 138 101 86 99 88 65 156 149 164 84 109 91 167 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A2U1MLI4_ARTAN) AT1G48960 Solyc03g119850.2 13 0 15 3 0 1 3 0 2 4 0 5 12 1 7 Protein decapping 5 (AHRD V3.3 *-* A0A2G3B6L4_CAPCH) Solyc03g119860.3 147 403 229 319 779 591 558 751 518 304 338 379 151 149 222 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2K3PFW4_TRIPR) AT1G74070 Solyc03g119870.3 895 1060 995 1040 993 1127 1113 1091 954 827 981 1111 1358 1268 1009 Nuclear-interacting partner of ALK (AHRD V3.3 *** A0A1J3JWS8_NOCCA) AT1G48950 Solyc03g119880.3 1 0 1 0 0 1 0 0 0 0 0 0 10 0 0 early nodulin-like protein 1 (AHRD V3.3 *** A0A2I4FZ84_9ROSI) AT3G18590 Solyc03g119890.4 765 588 556 761 535 470 521 571 556 836 462 597 530 559 585 F-box domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *** A0A2U1PDJ8_ARTAN) Solyc03g119900.4 1 10 1 6 4 0 0 2 3 4 3 0 7 2 2 Neurogenic locus notch protein-like (AHRD V3.3 *-* B6SSE6_MAIZE) Solyc03g119905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) Solyc03g119910.4 105 171 21 129 13 15 4 9 42 109 13 1 97 55 72 Le3OH-23b-hydroxylase AT1G80340 Solyc03g119920.1 463 368 457 318 313 361 368 317 416 453 338 341 398 383 461 DUF2921 domain-containing protein (AHRD V3.3 *** A0A1Q3BNA4_CEPFO) AT1G52780 Solyc03g119930.1 1375 596 656 891 123 168 102 185 609 937 474 517 714 616 1324 Molybdate transporter like (AHRD V3.3 *** A0A2R6PTH4_ACTCH) AT1G80310 Solyc03g119940.3 61 531 410 705 1155 1229 1098 1270 674 269 488 653 57 337 478 trichohyalin (AHRD V3.3 *** AT3G15550.1) AT3G15550 Solyc03g119950.1 98 103 93 81 48 74 60 67 72 68 65 65 108 145 110 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2WPP9_CAPBA) AT1G15510 Solyc03g119960.3 87 228 250 247 423 289 332 429 374 213 294 257 183 217 287 NPH3 domain (AHRD V3.3 *** A0A200Q7U6_9MAGN) AT1G52770 Solyc03g119970.3 299 361 416 449 296 301 310 328 484 448 293 475 441 513 365 ADP,ATP carrier protein (AHRD V3.3 *** A0A2G3D148_CAPCH) AT1G80300 Solyc03g119980.3 328 2185 1564 1700 3897 3799 3364 3914 2982 2570 2381 3459 1715 1967 1374 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** O04083_ARATH) AT1G52760 Solyc03g119990.4 50 217 222 176 303 382 384 385 324 148 183 251 99 131 162 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NI49_ARTAN) AT1G15490 Solyc03g120000.3 535 367 352 335 316 292 304 321 395 397 371 353 410 452 433 Zinc finger protein (AHRD V3.3 *** A0A200QR26_9MAGN) AT2G26000 Solyc03g120010.4 3568 2987 2811 3070 2095 2383 2621 2250 2548 2527 2875 2247 3377 3105 3109 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1LER1_ARTAN) AT3G15610 Solyc03g120020.4 0 0 0 1 0 0 0 0 1 4 8 0 1 11 4 HCO3-transporter family (AHRD V3.3 *** A0A2U1LER8_ARTAN) AT1G15460 Solyc03g120030.1 0 0 0 0 0 0 0 0 1 1 2 0 0 1 4 Agenet domain-containing protein (AHRD V3.3 *** A0A1Q3CB12_CEPFO) AT1G06340 Solyc03g120040.3 64 95 151 82 64 59 39 50 87 149 117 93 73 123 142 DUF642 domain-containing protein (AHRD V3.3 *** A0A1Q3BMB3_CEPFO) Solyc03g120050.3 78 36 51 19 30 23 40 23 42 43 52 45 40 61 48 Unknown protein Solyc03g120060.2 65 28 147 43 17 31 26 28 41 54 98 50 34 25 105 castasterone 26-hydroxylase Solyc03g120070.4 130 100 140 141 176 175 219 158 161 123 158 109 129 152 114 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QNZ8_9MAGN) AT5G24830 Solyc03g120080.4 975 1494 1053 863 708 732 612 803 608 609 628 747 1511 1460 748 periodic tryptophan protein 2 homolog (AHRD V3.3 *** A0A2I4EVX9_9ROSI) AT1G15440 Solyc03g120085.1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 Unknown protein Solyc03g120090.1 477 423 439 389 498 514 491 531 504 486 428 566 476 541 354 Pyridoxal 5'-phosphate synthase pdxS subunit (AHRD V3.3 *** U9T0K3_RHIID) AT3G16050 Solyc03g120100.3 5 2 16 14 24 37 13 15 13 13 17 45 2 11 35 Mitochondrial carrier protein (AHRD V3.3 *** A0A200PP03_9MAGN) AT1G79900 Solyc03g120110.3 494 246 271 208 12 13 14 27 130 188 267 107 281 251 309 Lectin protein kinase family protein (AHRD V3.3 *** A0A1I9LPL5_ARATH) AT3G16030 Solyc03g120120.3 82 70 133 73 38 44 32 29 53 43 148 36 29 66 94 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* Q8L402_ARATH) AT1G79910 Solyc03g120130.4 352 324 317 373 322 339 278 335 352 316 274 368 346 373 335 Methyltransferase family protein (AHRD V3.3 *** A0A2U1M665_ARTAN) AT1G79915 Solyc03g120140.3 1346 1598 1078 1677 1371 1325 1205 1408 1308 1831 1018 1255 1550 1528 1316 DUF632 domain-containing protein/DUF630 domain-containing protein (AHRD V3.3 *-* A0A1Q3CDM4_CEPFO) AT1G52320 Solyc03g120150.3 296 419 459 858 379 448 592 408 279 635 474 478 562 759 362 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *-* A0A2U1N5H2_ARTAN) AT4G13270 Solyc03g120155.1 36 7 48 9 5 18 19 6 5 18 58 11 13 8 30 BnaC03g69280D protein (AHRD V3.3 --* A0A078IDV4_BRANA) AT1G52342 Solyc03g120160.1 42 22 41 20 26 11 11 8 17 30 104 36 9 13 18 hypothetical protein (AHRD V3.3 *-* AT1G67910.2) AT1G52342 Solyc03g120170.1 67 69 94 75 40 38 45 55 62 65 80 33 81 46 84 Protein kinase, catalytic domain-containing protein (AHRD V3.3 -** A0A2U1L8L5_ARTAN) Solyc03g120180.3 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 Transmembrane protein (AHRD V3.3 *** F4ICW8_ARATH) AT1G52343 Solyc03g120190.3 0 4 23 7 2 7 6 5 0 0 5 1 1 0 9 ovate family protein 7 AT1G79960 Solyc03g120200.2 490 696 765 795 1102 1061 1137 864 675 556 675 643 677 834 601 RNA helicase DEAH-box11 AT1G79950 Solyc03g120210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FCS-Like Zinc finger 8 (AHRD V3.3 --* FLZ8_ARATH) Solyc03g120220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein MARD1 (AHRD V3.3 --* XP_006406149.1) Solyc03g120230.3 158 378 307 310 393 439 458 347 433 195 392 252 227 352 373 MAR-binding filament-like protein 1 (AHRD V3.3 *** MFP1_SOLLC) AT3G16000 Solyc03g120240.3 542 468 593 666 487 616 492 337 417 473 653 493 446 466 630 protein SYS1 homolog (AHRD V3.3 *** A0A2I4DZD6_9ROSI) Solyc03g120250.3 0 4 11 3 10 16 9 4 12 9 6 9 0 13 1 Sulfate transporter (AHRD V3.3 *** A1YKF8_BRASY) AT3G15990 Solyc03g120260.4 417 53 142 16 0 0 0 2 58 101 72 7 230 135 27 Coatomer subunit beta' (AHRD V3.3 *-* A0A1Q3BXD5_CEPFO) Solyc03g120270.4 2476 3405 2777 2709 3135 3408 3434 3422 3270 2438 2692 2633 3215 3227 2994 Coatomer subunit beta' (AHRD V3.3 *** A0A200PNW4_9MAGN) AT1G52360 Solyc03g120280.1 2092 2419 1807 1532 1421 1442 1485 1482 1770 1223 1471 1562 2951 2578 2165 Nuclear pore complex protein NUP50A (AHRD V3.3 *** A0A2G2WQ64_CAPBA) AT1G52380 Solyc03g120290.3 6 19 62 54 65 78 52 50 10 20 39 3 13 14 78 To encode a PR protein, Belongs to the plant thionin family with the following members:, putative (AHRD V3.3 *** A0A061GH02_THECC) AT1G12663 Solyc03g120300.3 1223 1207 1210 1241 1271 1370 1264 1406 1464 1402 1153 1437 1088 1251 1491 CASC3/Barentsz eIF4AIII binding protein (AHRD V3.3 *-* AT1G80000.3) AT1G80000 Solyc03g120310.3 220 334 384 352 450 389 389 381 387 303 388 339 343 305 460 UDP-Glycosyltransferase superfamily protein (AHRD V3.3 *-* A0A2U1N689_ARTAN) AT3G15940 Solyc03g120320.1 3 6 15 2 40 38 60 25 14 4 27 11 3 4 16 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1J3DG12_NOCCA) AT1G80440 Solyc03g120330.1 4 8 14 10 9 8 7 14 8 5 5 14 1 2 0 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1J3H379_NOCCA) AT1G80440 Solyc03g120340.3 1559 1441 1186 1214 1537 1644 1595 1604 1200 1276 875 1335 1247 1351 886 centromere protein C1 AT1G15660 Solyc03g120350.3 1309 1924 1228 1428 1463 1391 1461 1617 1654 1339 1031 1256 1615 1707 1519 N-alpha-acetyltransferase 15, NatA auxiliary subunit-like (AHRD V3.3 *** A0A2I4GME8_9ROSI) AT1G80410 Solyc03g120360.1 54 123 185 184 415 439 515 400 351 161 277 499 103 215 123 Phospholipase-like protein (PEARLI 4) family protein (AHRD V3.3 *-* A8MRF0_ARATH) Solyc03g120370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2YBS2_CAPAN) Solyc03g120380.3 1 21 1 11 28 23 18 12 19 6 9 7 0 7 5 auxin-regulated IAA19 AT3G15540 Solyc03g120390.3 395 292 208 250 149 137 143 145 282 435 337 342 210 411 554 auxin-regulated IAA15 Solyc03g120410.3 30 63 59 66 85 88 73 100 82 37 47 73 37 62 83 Nucleotide-diphospho-sugar transferases superfamily protein (AHRD V3.3 *** AT1G64980.3) Solyc03g120420.3 290 74 129 306 3 20 31 20 48 62 312 21 49 83 903 Unknown protein Solyc03g120430.3 346 632 479 710 1113 930 1035 1073 836 656 608 690 396 524 511 D-glycerate 3-kinase (AHRD V3.3 *** A0A2K3PBX9_TRIPR) AT1G80380 Solyc03g120440.3 37 292 284 346 572 452 438 430 232 144 187 308 162 279 170 cyclin A2_1 Solyc03g120450.4 358 520 642 493 658 681 548 742 844 673 563 797 483 658 471 Aminotransferase (AHRD V3.3 *** A0A200PN75_9MAGN) AT1G80360 Solyc03g120460.4 245 225 278 326 222 281 283 303 249 194 202 210 200 301 283 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PVT3_9MAGN) Solyc03g120470.4 1849 1726 1642 2376 927 953 974 1018 1406 2750 1491 1068 1938 1645 1967 tonoplast intrinsic protein 2.2 AT3G16260 Solyc03g120480.3 596 429 438 365 371 440 412 378 456 442 336 425 493 437 432 Putative eukaryotic LigT (AHRD V3.3 *** AT3G16230.2) AT3G16230 Solyc03g120490.3 955 1003 1208 984 964 1229 1031 815 981 918 1133 1159 1158 1090 1513 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** AT3G16200.1) AT3G16200 Solyc03g120500.4 1418 1210 1133 1263 1072 1202 1182 873 1101 1261 1264 971 1418 1186 1423 auxin-regulated IAA27 Solyc03g120510.1 334 373 270 355 203 237 216 208 279 250 257 301 404 356 436 Pentatricopeptide repeat-containing protein at3g46870-like protein (AHRD V3.3 *** A0A2K3P313_TRIPR) AT3G27750 Solyc03g120520.2 13 29 45 40 26 34 54 42 45 49 45 81 35 53 33 Peroxisome biogenesis protein 2 (AHRD V3.3 *-* A0A2G3C8M2_CAPCH) Solyc03g120530.3 117 138 103 198 219 209 183 138 153 89 185 153 123 145 248 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1PMP2_ARTAN) Solyc03g120540.3 241 180 277 164 137 119 92 112 134 200 190 116 274 209 228 Peroxyureidoacrylate/ureidoacrylate amidohydrolase (AHRD V3.3 *** A0A2K3NBB8_TRIPR) AT3G16190 Solyc03g120560.3 473 376 447 426 258 421 359 270 531 608 703 581 373 464 867 Protein NRT1/ PTR FAMILY 1.1 (AHRD V3.3 *** A0A2G3A3M4_CAPAN) AT1G52190 Solyc03g120570.3 15 8 21 35 7 3 6 0 25 10 67 12 11 29 20 Protein NRT1/ PTR FAMILY 1.1 (AHRD V3.3 *** A0A2G2WPC3_CAPBA) Solyc03g120580.3 36 23 108 63 81 67 81 49 62 26 59 57 55 46 83 Unknown protein Solyc03g120585.1 0 0 1 0 0 6 3 0 0 1 0 3 3 0 0 Unknown protein Solyc03g120600.4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Plant cadmium resistance protein (AHRD V3.3 *** Q2HU50_MEDTR) AT1G52200 Solyc03g120610.3 336 318 589 357 275 370 407 249 336 269 457 294 303 357 477 Cytochrome c-type biogenesis protein (AHRD V3.3 *** A0A1U8FU75_CAPAN) AT1G15220 Solyc03g120620.3 746 980 896 1460 913 816 890 782 1199 1004 1287 749 1460 1165 1747 Homeobox-leucine zipper protein GLABRA 2 (AHRD V3.3 *** A0A2G3A3K0_CAPAN) AT1G79840 Solyc03g120630.4 1427 2142 2165 3558 3287 2969 3809 3468 2092 3650 2180 2245 1544 2078 1712 30S ribosomal protein S17, chloroplastic (AHRD V3.3 *** A0A2G2WPB4_CAPBA) AT1G79850 Solyc03g120640.3 3328 6503 7761 7387 12359 10155 11689 11173 8450 9765 8006 9302 4833 4511 6437 Photosystem I reaction center subunit VI, chloroplastic (AHRD V3.3 *** A0A2G3D0C1_CAPCH) AT3G16140 Solyc03g120650.4 2 3 0 9 11 1 1 1 5 2 3 4 0 3 4 GDP-mannose pyrophosphorylase AT1G79860 Solyc03g120660.4 29 63 124 51 62 63 78 83 100 82 68 116 100 85 20 D-isomer specific 2-hydroxyacid dehydrogenase (AHRD V3.3 *** A0A200RC95_9MAGN) Solyc03g120670.3 691 1115 1187 1095 1331 1373 1400 1195 1356 933 1114 972 1306 1173 1009 2-hydroxyacid dehydrogenase (AHRD V3.3 *** A9CH04_AGRFC) AT1G79870 Solyc03g120680.3 103 114 78 96 91 137 120 123 148 112 101 146 101 115 127 2-hydroxyacid dehydrogenase (AHRD V3.3 *** A9CH04_AGRFC) Solyc03g120690.3 52 22 14 14 24 31 37 11 15 19 36 20 22 7 34 Dynein light chain (AHRD V3.3 *** A0A2G3D075_CAPCH) AT3G16120 Solyc03g120700.3 535 1237 977 1075 1230 1158 1280 1429 1196 877 856 890 1300 1191 976 Vps51/Vps67 family (Components of vesicular transport) protein (AHRD V3.3 *** F4KCR7_ARATH) AT5G16300 Solyc03g120710.2 1841 2065 2249 2018 1719 1666 1428 1879 2541 2631 2740 1928 2451 1557 2900 Late embryogenesis abundant protein (AHRD V3.3 *** A0A200PP54_9MAGN) Solyc03g120720.3 1022 1175 1326 1146 1132 923 925 1033 1275 1060 1204 1026 1447 1467 1693 Protein disulfide isomerase-like 1-5 (AHRD V3.3 *** A0A2G2WP56_CAPBA) AT3G16110 Solyc03g120730.3 1391 713 1134 1087 610 644 650 599 707 827 855 915 986 919 1255 Sulfite exporter TauE/SafE family protein (AHRD V3.3 *** A0A2U1KY14_ARTAN) Solyc03g120740.1 178 248 584 360 259 240 217 282 333 295 414 352 320 358 487 hypothetical protein (AHRD V3.3 *** AT1G15230.1) AT1G15230 Solyc03g120750.3 96 306 380 312 448 409 452 442 378 294 339 366 397 304 197 Ras-related protein (AHRD V3.3 *** A0A2U1NEY8_ARTAN) AT1G52280 Solyc03g120760.4 1042 1027 893 668 948 833 862 1108 834 1192 723 1118 953 805 639 Proline-rich receptor-like protein kinase PERK2 (AHRD V3.3 *** A0A1U8FV09_CAPAN) Solyc03g120770.4 963 815 919 952 827 935 931 844 850 875 982 859 725 838 1150 Phox (PX) domain-containing protein (AHRD V3.3 *** F4HZJ6_ARATH) AT1G15240 Solyc03g120780.3 1456 3513 3108 2379 3146 3252 3078 3068 2070 1526 2607 2182 4010 3444 2850 Ribosomal protein L37 (AHRD V3.3 *** A0A1J7I2W0_LUPAN) AT3G16080 Solyc03g120790.1 33 9 20 40 32 19 14 11 31 21 95 24 14 21 27 ovate family protein 8 AT3G16070 Solyc03g120800.4 1 14 7 10 12 12 19 32 18 10 12 8 4 6 1 Peroxidase (AHRD V3.3 *** K4BMM9_SOLLC) AT4G33870 Solyc03g120810.4 635 1585 1405 1669 2109 2087 2134 2193 1901 1214 1702 1667 1269 1553 1258 Kinesin-like protein (AHRD V3.3 *** Q9AVP4_TOBAC) AT3G16060 Solyc03g120820.4 136 101 140 112 101 99 147 62 81 101 166 76 95 104 117 Cytochrome c oxidase 19-2 (AHRD V3.3 *** A0A2U1PU27_ARTAN) AT1G69750 Solyc03g120830.3 68 38 47 31 19 34 13 22 33 72 61 50 23 42 46 transmembrane protein (AHRD V3.3 *** AT1G52155.1) AT1G52155 Solyc03g120840.3 235 102 124 142 109 129 103 97 106 156 153 132 85 143 206 Ethylene-responsive transcription factor TINY (AHRD V3.3 *** A0A2G2WP67_CAPBA) Solyc03g120850.4 943 1548 1385 1083 967 830 921 1000 1339 695 994 1078 962 1402 1469 Chaperonin 60 beta (AHRD V3.3 *** A0A2U1NW26_ARTAN) Solyc03g120860.2 0 1 11 17 21 13 19 16 0 0 15 9 9 2 3 early nodulin-like protein 1 (AHRD V3.3 *** A0A2I4G5I0_9ROSI) AT1G79800 Solyc03g120870.3 25 139 86 237 394 579 500 594 82 98 90 173 82 96 73 CASP-like protein (AHRD V3.3 *** A0A2I4G5I1_9ROSI) AT3G16300 Solyc03g120880.4 3045 2993 2934 2961 2634 2930 2729 2590 2079 2401 3234 2813 2929 2819 3011 Nuclear pore complex protein NUP35 (AHRD V3.3 *** A0A2G3A3R5_CAPAN) AT3G16310 Solyc03g120890.3 487 1397 982 2043 1730 1504 1768 1685 1913 2203 2527 1224 1034 954 1309 GATA transcription factor (AHRD V3.3 *** K4BMN8_SOLLC) Solyc03g120900.3 42 33 41 25 48 39 42 51 40 54 50 23 73 44 98 WD40 repeat (AHRD V3.3 *** A0A200QDT5_9MAGN) Solyc03g120910.4 3116 2948 3311 2645 3443 3643 4166 3631 3418 2532 2838 2933 3691 3397 2367 Homeobox leucine-zipper protein (AHRD V3.3 *** Q76CL1_ZINVI) AT1G52150 Solyc03g120920.1 1 5 0 8 0 0 0 1 1 1 2 1 1 3 0 DUF1677 domain-containing protein (AHRD V3.3 *** A0A1Q3DB84_CEPFO) AT5G25840 Solyc03g120930.1 131 528 365 260 837 673 734 621 425 257 317 368 549 309 81 Avr9/Cf-9 rapidly elicited protein (AHRD V3.3 *** Q9ZU12_ARATH) Solyc03g120940.4 1297 1395 1907 1964 3173 3343 3290 2673 2255 1434 2343 1929 1518 1736 2072 SAWADEE HOMEODOMAIN protein (AHRD V3.3 *** A0A178W211_ARATH) AT1G15215 Solyc03g120950.3 3 78 95 136 281 187 194 244 89 47 73 107 11 54 40 hypothetical protein (AHRD V3.3 *** AT2G42110.1) AT2G42110 Solyc03g120960.1 6 4 0 1 1 10 10 8 6 5 1 6 2 3 0 Protein STIG1 (AHRD V3.3 *** STIG1_SOLLC) Solyc03g120970.3 52 143 88 119 196 169 153 178 197 52 127 138 75 124 128 Non-heme dioxygenase N-terminal domain (AHRD V3.3 *** A0A200RBZ8_9MAGN) AT1G79760 Solyc03g120980.3 1469 1105 481 564 412 432 473 456 602 819 822 359 446 562 707 Pleiotropic drug resistance transporter 5 (AHRD V3.3 *** I6XGC6_NICPL) AT1G59870 Solyc03g120990.3 18 139 843 199 473 420 570 467 142 236 237 124 289 271 332 Malic enzyme (AHRD V3.3 *** A0A2G3D1G2_CAPCH) AT1G79750 Solyc03g121000.3 631 530 399 563 396 260 304 376 190 570 296 381 602 440 318 Protein PAF1-like protein (AHRD V3.3 *-* A0A2G3A3W1_CAPAN) Solyc03g121010.4 484 356 422 352 337 404 298 292 155 295 270 294 452 141 292 Unknown protein Solyc03g121020.3 2076 2145 1674 2046 2073 1903 2023 2438 2179 2324 1648 2077 2020 2368 1718 RNA polymerase II associated factor Paf1 (AHRD V3.3 *** A0A2U1KW07_ARTAN) AT1G79730 Solyc03g121030.2 1206 1141 1348 1146 778 851 966 732 734 700 1109 915 1048 1239 1348 MMS19 nucleotide excision repair protein-like protein (AHRD V3.3 *** A0A1J3J2C2_NOCCA) AT5G48120 Solyc03g121040.4 300 344 353 315 259 249 209 257 309 281 265 232 547 407 300 Taurine catabolism dioxygenase TauD/TfdA (AHRD V3.3 *** A0A200QPY7_9MAGN) AT3G21360 Solyc03g121050.3 536 789 815 800 828 812 897 841 925 574 812 723 655 751 550 LysM domain receptor-like kinase 3 (AHRD V3.3 *** A0A2G3D1H3_CAPCH) AT1G51940 Solyc03g121060.4 2613 2260 2411 1587 1174 976 828 1051 3574 2886 2334 1295 1934 1826 1794 auxin-regulated IAA26 AT3G16500 Solyc03g121070.3 280 800 652 674 713 653 708 895 913 576 609 835 616 712 530 hexokinase Solyc03g121080.3 44 505 464 655 1282 1247 1143 1513 606 284 422 858 91 336 262 BnaA06g11160D protein (AHRD V3.3 *-* A0A078HBJ5_BRANA) Solyc03g121090.4 2135 696 324 253 91 81 109 49 186 1322 720 188 157 227 334 BnaC02g12160D protein (AHRD V3.3 *-* A0A078HTB1_BRANA) AT5G56550 Solyc03g121100.4 81 218 266 256 145 121 116 140 318 470 472 279 186 196 75 acid phosphatase 1-like (AHRD V3.3 *** A0A2G3A413_CAPAN) Solyc03g121110.3 593 523 545 604 478 588 642 556 463 637 438 534 407 480 466 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QDH1_9MAGN) AT1G51965 Solyc03g121120.4 1145 912 681 913 843 745 883 798 798 890 750 918 807 1050 778 DNA repair protein RadA-like protein (AHRD V3.3 *** A0A1J3K4B2_NOCCA) AT5G50340 Solyc03g121130.3 1004 1014 983 866 951 904 1026 771 639 741 973 899 1181 1009 1134 rRNA-processing protein FCF1-like protein (AHRD V3.3 *** A0A2G2WP95_CAPBA) AT2G46230 Solyc03g121140.4 210 29 13 15 15 2 2 6 16 23 47 9 7 23 33 protein CHUP1, chloroplastic (AHRD V3.3 *** A0A2I4DVC6_9ROSI) AT1G52080 Solyc03g121170.3 158 811 523 687 1269 1265 1301 1473 923 293 438 734 436 487 366 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3D0R1_CAPCH) AT3G16370 Solyc03g121180.4 2359 4448 3565 3944 2928 2906 2110 3211 5113 4521 3655 4647 3965 3123 1847 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3D0P9_CAPCH) AT3G16370 Solyc03g121190.4 1 1 7 5 10 4 3 2 6 3 9 0 1 2 0 Unknown protein Solyc03g121200.4 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 Unknown protein Solyc03g121210.4 536 430 428 334 375 423 394 306 289 390 533 399 347 383 395 Mediator of RNA polymerase II transcription subunit 6 (AHRD V3.3 *** A0A2G3D0R6_CAPCH) AT3G21350 Solyc03g121220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF868 family protein (DUF868) (AHRD V3.3 *** Q9SI11_ARATH) AT2G04220 Solyc03g121230.3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Protein kinase family protein (AHRD V3.3 *** A0A1P8AW67_ARATH) Solyc03g121240.1 6 2 15 7 22 3 5 2 11 5 15 5 0 1 1 Transcription factor HEC2 (AHRD V3.3 *** A0A2G2WPZ2_CAPBA) AT3G21330 Solyc03g121250.3 502 337 275 457 239 375 342 245 239 271 268 291 284 330 404 3'-5' exonuclease domain (AHRD V3.3 *** A0A200QLJ1_9MAGN) Solyc03g121260.3 511 659 620 466 479 527 576 545 513 491 435 468 449 612 447 23S rRNA (Uracil-5-)-methyltransferase rumA (AHRD V3.3 *** A0A2K3PEV5_TRIPR) AT3G21300 Solyc03g121270.3 619 708 641 685 738 667 723 680 1960 1768 2004 1754 1064 993 957 IAA-amino acid hydrolase ILR1-like protein (AHRD V3.3 *** A0A2U1PZX6_ARTAN) AT1G51760 Solyc03g121280.4 431 328 431 445 350 461 483 392 329 220 453 312 410 396 600 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MN76_TRIPR) Solyc03g121290.4 845 694 800 605 538 517 554 475 674 717 615 605 737 761 762 F-box domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *** A0A2U1PDJ8_ARTAN) Solyc03g121300.2 318 237 552 786 679 764 887 402 347 303 723 305 200 300 1065 jacalin-related lectin 19 (AHRD V3.3 *** A0A2G2XW42_CAPAN) AT1G73040 Solyc03g121310.2 1793 1423 1664 1258 1455 1359 1453 972 1267 1036 1477 1160 1655 1771 2106 RWD domain-containing protein 1 (AHRD V3.3 *** A0A2I4DS07_9ROSI) AT1G51730 Solyc03g121320.3 857 698 703 568 535 697 622 558 577 625 605 567 712 656 604 Tudor/PWWP/MBT superfamily protein (AHRD V3.3 *** F4IXJ0_ARATH) AT3G21295 Solyc03g121330.3 3131 6746 6511 4340 6641 6703 6569 6553 4041 3004 5263 4827 8459 6612 5920 60S ribosomal protein L28 (AHRD V3.3 *** B3TLS3_ELAGV) AT2G19730 Solyc03g121340.1 47 14 53 0 0 0 1 0 1 3 63 1 8 26 6 Unknown protein Solyc03g121350.3 34 33 32 15 31 26 28 47 22 32 23 22 15 27 18 Anoctamin-like protein (AHRD V3.3 *** A0A2G2WPY2_CAPBA) AT1G73020 Solyc03g121360.1 1305 1227 1673 821 1234 1038 941 1335 1431 1183 2006 1291 1594 1095 1208 Charged multivesicular body protein 1-like (AHRD V3.3 *** A0A2K3LIZ7_TRIPR) AT1G17730 Solyc03g121365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g121370.3 1214 1511 1700 1406 1219 1358 1277 1151 1014 877 1169 1151 1874 1767 1806 40S ribosomal protein S15a (AHRD V3.3 *** B6U773_MAIZE) AT2G19720 Solyc03g121380.3 1141 760 603 522 663 660 642 679 693 696 611 592 609 597 845 Mitochondrial outer membrane import complex protein METAXIN (AHRD V3.3 *-* A0A2G2V8U8_CAPBA) AT3G21290 Solyc03g121390.1 0 2 2 0 0 3 0 0 2 0 0 0 0 4 3 Serine/threonine protein phosphatase 2A regulatory subunit A (AHRD V3.3 *-* A0A2K3NUS0_TRIPR) Solyc03g121400.1 238 187 266 255 78 94 89 74 141 189 508 119 220 211 420 Dof zinc finger protein14 AT3G21270 Solyc03g121410.3 894 1181 1254 1286 1062 1393 1347 1200 1108 909 1252 1044 1064 1205 898 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** A0A2G2V8X2_CAPBA) AT1G17720 Solyc03g121420.4 4 11 31 21 34 28 26 16 7 12 0 9 0 6 22 Inorganic pyrophosphatase 1 (AHRD V3.3 *** A0A2G2XXB4_CAPAN) AT1G73010 Solyc03g121425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Inorganic pyrophosphatase 1 (AHRD V3.3 *** A0A2G3D0M9_CAPCH) Solyc03g121440.4 724 1892 1558 1387 2988 2865 3007 2839 2884 1402 1471 2268 1258 1749 1520 Proline-rich receptor-like protein kinase PERK13 (AHRD V3.3 *** A0A2G2XXB3_CAPAN) AT3G13690 Solyc03g121450.3 1343 962 1065 827 1131 935 934 819 928 1061 1040 1042 915 882 787 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** Q8GYT5_ARATH) AT3G13700 Solyc03g121460.1 527 403 600 402 307 361 381 306 374 521 596 442 350 329 322 PRA1 family protein (AHRD V3.3 *** A0A1U8FTV2_CAPAN) AT3G13720 Solyc03g121470.4 0 1 5 8 7 9 2 5 4 7 1 2 0 8 0 Phospholipase D (AHRD V3.3 *-* A0A2G3D0N6_CAPCH) Solyc03g121480.3 511 490 506 695 758 742 761 696 461 704 683 655 365 466 497 Thioredoxin-like 2, chloroplastic (AHRD V3.3 *** A0A2G2XXH1_CAPAN) Solyc03g121490.4 177 101 212 183 110 156 121 79 90 115 158 75 114 168 166 Unknown protein Solyc03g121500.3 755 623 524 397 559 459 419 759 638 632 458 590 644 570 528 Protein FLX-like 3 (AHRD V3.3 *** A0A1U8G3L9_CAPAN) AT1G55170 Solyc03g121510.4 0 9 0 3 23 28 23 31 14 8 3 6 21 17 11 Cytochrome p450 (AHRD V3.3 *** E5GCA5_CUCME) AT3G13730 Solyc03g121520.3 413 431 372 249 279 383 318 365 286 291 308 312 407 334 311 WAS/WASL-interacting family protein (AHRD V3.3 *** AT1G55160.1) AT1G55160 Solyc03g121530.3 552 547 459 447 455 480 486 381 334 359 407 347 488 551 329 Ribonuclease III family protein (AHRD V3.3 *** A0A2K3P2M6_TRIPR) AT1G55140 Solyc03g121540.3 2591 1016 1340 1462 1851 1893 1699 1771 798 964 1098 1129 570 927 969 beta-galactosidase 3 AT3G13750 Solyc03g121550.3 80 96 84 110 155 141 167 139 93 154 91 153 49 98 45 Unknown protein Solyc03g121560.3 249 370 295 386 369 371 379 350 314 327 220 339 265 328 286 CA-responsive protein (AHRD V3.3 *** AT1G17665.1) AT1G17665 Solyc03g121570.3 1101 1359 1004 1107 1464 1354 1259 1623 1340 1286 878 1346 1179 1309 993 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G2XXI0_CAPAN) AT3G13772 Solyc03g121580.3 1079 2258 2063 1834 3148 2600 2636 3688 2202 2366 1591 2783 1868 2218 1142 WD-40 repeat-containing protein MSI4-like (AHRD V3.3 *** A0A2I4GHJ4_9ROSI) AT2G19520 Solyc03g121590.3 3824 4173 3528 3442 3783 4112 3878 3685 3662 3745 3975 3112 4394 4287 4117 Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** A0A2G2XXF0_CAPAN) AT3G13870 Solyc03g121600.4 469 4246 2590 2490 4442 5187 4343 4725 3481 1529 2597 2875 1353 2484 815 Glucose-methanol-choline (GMC) oxidoreductase family protein (AHRD V3.3 *** A0A2U1MMK8_ARTAN) AT1G72970 Solyc03g121610.3 541 1712 1208 1651 2867 2371 2797 3313 3119 2218 1471 2542 1300 1218 1318 Serine/threonine-protein kinase PBS1 (AHRD V3.3 *** A0A2G2XXF9_CAPAN) Solyc03g121620.1 426 513 382 210 189 132 146 169 210 268 721 282 398 296 592 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** A0A2U1MMJ0_ARTAN) AT1G17620 Solyc03g121630.3 196 308 341 266 390 325 317 396 402 242 241 382 366 345 274 Protein FAR1-RELATED SEQUENCE 4 (AHRD V3.3 *** A0A2G3D0K3_CAPCH) AT1G76320 Solyc03g121640.3 1206 1152 1134 912 663 713 727 706 807 677 954 843 1509 1325 1089 Chaperonin-60 kDa protein (AHRD V3.3 *** E5GCB2_CUCME) AT3G13860 Solyc03g121650.3 463 382 313 312 388 395 376 375 388 259 269 400 414 445 405 Duf724 domain-containing protein 7 (AHRD V3.3 *** A0A314KGX7_NICAT) AT2G47230 Solyc03g121660.3 1949 1973 3864 2701 1452 1559 1518 1152 2721 1633 5013 1640 1845 2312 3511 Protein indeterminate-domain 7 (AHRD V3.3 *** A0A2G2V8T0_CAPBA) AT1G55110 Solyc03g121670.4 327 353 290 291 253 261 316 249 290 296 191 287 235 283 255 Metallo-hydrolase/oxidoreductase superfamily protein (AHRD V3.3 *** F4JEJ3_ARATH) AT3G13800 Solyc03g121680.3 0 0 0 6 0 0 1 3 0 0 1 3 0 0 0 Beta-fructofuranosidase, insoluble isoenzyme CWINV3 (AHRD V3.3 *** A0A2G2V8U1_CAPBA) Solyc03g121690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* Q9LW05_ARATH) AT3G15740 Solyc03g121700.4 1953 1726 1384 1135 1773 1534 1348 1752 1579 1133 1447 1491 2176 1765 1498 Nucleosome assembly protein family (AHRD V3.3 *** A9TVZ4_PHYPA) Solyc03g121710.2 1032 1154 967 796 784 961 934 905 854 738 800 873 1139 1162 884 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4I906_ARATH) Solyc03g121720.2 241 859 841 865 1388 1238 1384 1505 1122 803 842 1020 591 783 735 Glyoxylate reductase 2 (AHRD V3.3 *** A0A1P8AS42_ARATH) AT1G17650 Solyc03g121730.3 1958 1417 1234 1223 1558 1332 1431 1582 1387 1679 1130 1418 1172 1201 1218 5'-nucleotidase SurE (AHRD V3.3 *** A0A1J3GXW9_NOCCA) AT1G72880 Solyc03g121740.3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 26 AT3G13890 Solyc03g150161.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MZL8_TRIPR) ATMG00240 Solyc03g121760.3 36 141 146 273 401 378 414 360 222 131 220 251 66 152 120 SUN-like protein 11 AT1G72670 Solyc03g121770.2 1 0 0 0 0 2 2 1 0 0 1 0 1 0 0 Calmodulin-binding protein (AHRD V3.3 *** S8CHI1_9LAMI) Solyc03g121780.1 6 6 90 15 19 36 27 25 6 12 25 32 0 25 15 Solyc03g121780 Solyc03g121790.2 24 22 125 49 80 146 80 102 49 38 51 136 9 43 11 EPIDERMAL PATTERNING FACTOR-like protein 3 (AHRD V3.3 *** A0A2G2V8R0_CAPBA) Solyc03g121800.4 293 566 648 503 468 621 549 484 548 403 531 517 541 537 502 copz1 nonclathrin coat protein zeta1-COP AT1G60970 Solyc03g121810.2 0 1 4 0 0 1 1 2 1 2 4 1 1 0 0 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A2G2ZVU5_CAPAN) AT1G17500 Solyc03g121820.3 2104 2481 3365 4073 3437 4061 4056 3087 2671 2513 3430 2566 3100 3049 3690 Casein kinase (AHRD V3.3 *** A2I5G0_BETVU) AT1G72710 Solyc03g121825.1 5 5 4 3 1 6 2 1 8 1 0 1 2 2 12 Unknown protein Solyc03g121830.1 616 733 549 532 583 723 712 688 611 582 559 648 732 652 547 Glycylpeptide N-tetradecanoyltransferase (AHRD V3.3 *** A0A2G2ZVU0_CAPAN) AT5G57020 Solyc03g121840.3 257 200 214 194 202 164 189 122 193 121 163 185 323 265 237 telomere repeat-binding factor 4-like (AHRD V3.3 *** A0A2I4FU12_9ROSI) AT1G17520 Solyc03g121850.3 322 204 225 291 127 118 131 165 338 195 210 247 275 364 254 hypothetical protein (AHRD V3.3 *-* AT1G05950.4) AT1G05950 Solyc03g121860.1 964 1101 978 812 1078 1262 972 953 711 835 1042 889 1297 1139 967 Mitochondrial import inner membrane translocase subunit TIM23-like protein (AHRD V3.3 *** A0A2K3MPU1_TRIPR),Pfam:PF02466 AT1G17530 Solyc03g121870.3 206 180 215 159 130 217 230 147 136 161 152 141 127 138 201 Methyltransferase-like protein (AHRD V3.3 *** A0A2G3D0I7_CAPCH),Pfam:PF13489 Solyc03g121880.4 5380 2282 1879 2215 1438 1608 1705 1343 1795 2756 1922 1797 2563 2545 4871 Protein phosphatase 2C 16 (AHRD V3.3 *** A0A2G2WPX5_CAPBA) AT1G72770 Solyc03g121890.1 1931 1411 1632 1421 1212 1191 1225 1061 1084 2274 2829 1232 1248 1324 1352 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* Q9CAJ1_ARATH) AT1G72790 Solyc03g121900.1 99 1274 245 566 1802 1697 1641 1394 550 284 113 109 74 235 127 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein (AHRD V3.3 *** A0A2P5DNS6_PARAD) AT5G48485 Solyc03g121910.1 790 1011 432 530 735 693 618 844 820 1056 707 765 815 706 614 Threonine synthase (AHRD V3.3 *** B6TPP7_MAIZE) AT4G29840 Solyc03g121920.3 1513 726 789 789 706 651 849 587 707 1504 849 889 565 645 739 Mitochondrial carrier protein (AHRD V3.3 *** A0A200QEN9_9MAGN) Solyc03g121930.3 330 397 529 449 393 475 492 373 315 228 454 343 531 501 480 PHD finger protein ALFIN-LIKE 5 (AHRD V3.3 *** A0A2G2WQ36_CAPBA) Solyc03g121940.3 809 488 694 545 130 169 192 147 311 490 295 356 608 594 869 Nuclear transcription factor Y subunit A-8 (AHRD V3.3 *** A0A2G2ZVT6_CAPAN) Solyc03g121950.3 4959 2195 1953 1996 1401 1462 1512 1464 1938 2621 1752 1966 1575 1986 2079 Polyadenylate-binding protein-interacting protein 3 (AHRD V3.3 *** A0A2G2WPZ4_CAPBA) AT3G14010 Solyc03g121960.3 908 1129 1157 1327 898 926 881 943 1666 1435 1647 1479 1144 1309 1634 Phospholipid:diacylglycerol acyltransferase (AHRD V3.3 *** A0A2U1KQW5_ARTAN) Solyc03g121970.1 994 1098 691 1085 458 416 403 406 1052 818 730 708 1000 1079 1158 protein BIG GRAIN 1-like A (AHRD V3.3 *** A0A2I4FTX4_9ROSI) AT1G54200 Solyc03g121980.3 2220 2018 2248 1839 1888 1864 1882 1882 1678 1818 1670 1869 1828 1934 2089 Developmentally-regulated GTP-binding protein 2 (AHRD V3.3 *** B6TJC5_MAIZE) AT1G17470 Solyc03g121990.4 1097 684 873 738 654 626 594 562 800 833 653 675 717 828 812 Developmentally-regulated GTP-binding protein 2 (AHRD V3.3 *** A0A2G2WPW5_CAPBA) AT1G72650 Solyc03g122000.4 103 104 21 45 15 27 45 26 34 33 54 28 52 67 48 Cytochrome b6-f complex subunit 4 (AHRD V3.3 *** A0A2S0SWC7_9FABA) Solyc03g122010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A1B1MTB7_GLELI) Solyc03g122020.4 2815 2174 1439 1473 1300 1111 1147 1529 1775 2475 1646 1714 2008 1769 2017 Transcription initiation factor TFIID subunit 12 (AHRD V3.3 *** A0A1U8G3D7_CAPAN) AT1G17440 Solyc03g122030.1 1136 974 765 595 811 827 712 923 837 906 1058 840 853 918 735 Trihelix transcription factor ASIL2 (AHRD V3.3 *-* ASIL2_ARATH) AT3G14180 Solyc03g122040.4 1518 2043 2459 2076 2181 2460 2880 2400 2520 2044 2361 2415 1701 2222 2501 COP1-interacting protein-like protein (AHRD V3.3 *-* F4IDB4_ARATH) AT3G14172 Solyc03g122050.1 0 2 1 0 3 0 3 2 2 1 0 0 4 4 14 ABC transporter (AHRD V3.3 *-* A0A200QCT2_9MAGN) Solyc03g122060.3 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 Protein SRG1 (AHRD V3.3 *-* A0A2G2V895_CAPBA) Solyc03g122070.3 8 5 6 4 3 1 6 2 5 3 7 8 3 8 13 ABC transporter (AHRD V3.3 *-* A0A200QCT2_9MAGN) Solyc03g122080.3 16 8 24 5 11 13 11 7 7 6 10 9 7 9 52 DUF936 domain-containing protein (AHRD V3.3 *** A0A1Q3B0V3_CEPFO) AT3G14170 Solyc03g122090.3 1212 812 936 856 692 799 900 594 748 827 1041 763 937 887 1128 25.3 kDa vesicle transport protein (AHRD V3.3 *** A0A1U8G1E9_CAPAN) Solyc03g122100.3 24 25 32 17 45 61 44 29 20 21 6 20 40 23 9 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *-* A0A2G2ZVR7_CAPAN) Solyc03g122110.1 34 43 37 38 46 33 35 30 42 26 17 18 37 51 40 Pre-mRNA-splicing factor CWC22-like protein (AHRD V3.3 *** A0A2G2ZS42_CAPAN) Solyc03g122120.4 596 292 369 225 143 185 154 157 229 316 254 159 462 373 351 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** A0A2G2ZVR7_CAPAN) Solyc03g122130.3 9 1 0 3 8 8 7 4 5 0 1 0 0 0 18 Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 (AHRD V3.3 *** A0A2G3D0F6_CAPCH) AT3G14130 Solyc03g122140.3 199 85 255 255 42 52 57 28 150 175 441 204 108 211 159 Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 (AHRD V3.3 *** A0A2G2WPV6_CAPBA) AT3G14130 Solyc03g122150.3 9 3 4 0 0 0 0 0 2 7 0 1 3 10 3 Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 (AHRD V3.3 *-* A0A2G2WQ07_CAPBA) Solyc03g122160.1 5 6 13 5 0 3 0 0 1 4 16 8 0 13 13 Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 (AHRD V3.3 *-* A0A2G2WPV6_CAPBA) Solyc03g122170.4 109 84 99 105 46 67 67 65 142 146 97 86 176 155 142 Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 (AHRD V3.3 *** A0A2G2WQ07_CAPBA) AT3G14130 Solyc03g122180.4 1400 1818 1970 1908 2290 2364 2173 2036 1868 1470 1763 2298 1705 1803 1662 Oligouridylate-binding protein 1A (AHRD V3.3 *** A0A2G3D0E7_CAPCH) AT1G17370 Solyc03g122190.3 1076 3172 6252 1596 1743 1878 1659 2121 3136 4787 4698 2854 2002 2225 1345 Protein TIFY 10A (AHRD V3.3 *** A0A2G2WQ40_CAPBA) Solyc03g122210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc03g122230.2 0 0 10 0 2 0 0 0 0 0 0 5 0 0 0 pollen receptor-like kinase 3 (AHRD V3.3 *** A0A2G2ZVT8_CAPAN) AT3G42880 Solyc03g122240.3 620 453 515 411 304 369 421 402 552 492 628 431 353 444 301 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A2G3D0E6_CAPCH) AT3G14090 Solyc03g122250.3 658 1176 1186 1011 1279 1237 1324 1355 1426 1801 1239 1258 1049 1017 1210 Transmembrane receptor (AHRD V3.3 *** A0A200Q182_9MAGN) AT1G72480 Solyc03g122260.3 768 712 700 797 871 974 875 755 568 721 690 739 834 770 733 U6 snRNA-associated Sm-like protein LSm1 (AHRD V3.3 *** A0A1U8FUD8_CAPAN) AT3G14080 Solyc03g122270.4 854 603 510 591 382 324 313 469 1018 1012 1000 769 519 809 784 Inter-alpha-trypsin inhibitor heavy chain-like protein (AHRD V3.3 *** Q8L798_ARATH) Solyc03g122280.3 784 607 540 646 522 607 501 521 627 592 589 537 714 640 604 Lipase class 3 protein-like (AHRD V3.3 *** Q6K832_ORYSJ) AT3G14075 Solyc03g122300.3 2553 1643 2305 1712 1840 1796 1422 1285 1237 1566 2336 1131 2116 1483 2884 DUF1677 family protein (DUF1677) (AHRD V3.3 *** Q9SK23_ARATH) AT1G72510 Solyc03g122310.4 3179 2468 2623 2719 2805 2545 2544 3377 4483 3960 2655 3590 2787 2894 2314 Aldehyde dehydrogenase (AHRD V3.3 *** Q69P84_ORYSJ) AT1G54100 Solyc03g122320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g122330.1 0 3 0 0 0 2 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g122340.3 3646 6322 10337 4939 7030 6858 6568 8715 6745 8676 7378 9160 4723 5921 3518 lipoxygenase D AT1G17420 Solyc03g122350.3 1132 764 870 464 165 159 139 179 352 825 1370 297 3291 1644 872 Cytochrome P450 (AHRD V3.3 *** Q43795_TOBAC) Solyc03g122360.3 288 1328 1336 1228 1500 1159 1287 1473 2261 734 872 1232 1805 1140 1091 Cytochrome P450 (AHRD V3.3 *** Q43795_TOBAC) Solyc03g122370.4 589 503 491 544 468 518 525 567 482 448 340 449 484 651 547 ARM repeat superfamily protein (AHRD V3.3 *** AT1G72560.7) AT1G72560 Solyc03g122375.1 0 0 0 0 0 1 0 0 0 0 11 0 0 0 0 Unknown protein Solyc03g123370.3 2909 1507 1484 1303 1025 1097 1133 1041 1571 3174 1835 1622 1357 1539 1908 GTP pyrophosphokinase, (P)ppGpp synthetase II Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (AHRD V3.3 *-* A0A2D1JZR2_9GAMM) AT3G14050 Solyc03g123380.1 0 0 16 3 11 14 4 5 5 6 0 1 1 2 0 Unknown protein Solyc03g123390.4 10 377 188 292 179 174 150 218 826 1457 510 1084 186 294 167 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9LNR2_ARATH) AT1G17430 Solyc03g123400.1 0 0 0 4 2 0 6 0 1 0 1 0 0 1 2 GRAS16 AT3G13840 Solyc03g123410.1 4 31 11 15 4 6 5 2 14 17 2 9 4 11 6 Germin-like protein 1 (AHRD V3.3 *** A0A1U8G802_CAPAN) AT1G72610 Solyc03g123420.1 361 393 392 1353 517 545 750 502 340 926 385 509 248 549 284 proline-rich receptor-like protein kinase PERK2 (AHRD V3.3 *-* A0A2I4FTL8_9ROSI) AT1G54215 Solyc03g123430.4 170 236 489 524 455 550 471 559 216 336 250 546 170 357 142 LTM interacting AP2 Solyc03g123440.3 309 628 697 604 726 708 692 841 1044 504 611 715 656 706 498 DNA demethylase 4 Solyc03g123450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc03g123460.4 118 71 119 33 22 24 28 25 41 123 220 66 20 32 48 DUF581 domain-containing protein (AHRD V3.3 *** A0A1Q3D286_CEPFO) Solyc03g123470.1 0 1 1 0 0 0 0 0 2 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WPU0_CAPBA) Solyc03g123480.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2U1PAI0_ARTAN) Solyc03g123490.1 1277 1814 1212 1220 1359 1301 1041 1459 2305 2042 1745 1641 1185 1238 1550 Subtilisin-like protease-like protein (AHRD V3.3 *** A0A2K3N1H7_TRIPR) AT3G14240 Solyc03g123500.4 2523 3285 3257 3010 2239 2153 2096 2716 5769 5732 5007 3308 4678 3355 3052 GCC box binding protein C.4 AT1G53910 Solyc03g123510.3 88 32 75 64 18 14 18 11 35 43 73 18 20 14 56 GDSL esterase/lipase 5-like (AHRD V3.3 *-* A0A1U8G673_CAPAN) Solyc03g123520.3 2149 1446 1425 1542 1124 1208 1146 1038 1343 1280 1395 905 1232 1424 1552 Phosphoinositide phosphatase SAC2 (AHRD V3.3 *** A0A2G3D1F1_CAPCH) AT3G14205 Solyc03g123530.4 1916 1799 1453 963 945 909 925 875 1060 692 1035 1005 1573 1640 1600 CCAAT/enhancer-binding protein zeta (AHRD V3.3 *** A0A1J3FE65_NOCCA) AT1G72440 Solyc03g123540.3 49 34 79 50 62 58 49 39 38 29 50 67 28 35 39 17.4 kDa class III heat shock protein (AHRD V3.3 *** A0A2G3D1F4_CAPCH) AT1G54050 Solyc03g123550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Small auxin up-regulated RNA39 Solyc03g123560.3 572 241 802 483 323 464 486 278 416 329 734 411 393 396 270 Chaperone protein DnaJ (AHRD V3.3 *-* A0A1J3IS52_NOCCA) AT3G14200 Solyc03g123570.3 744 649 783 765 523 614 704 598 877 570 651 575 606 744 712 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B (AHRD V3.3 *** A0A2G2WPE3_CAPBA) AT3G14270 Solyc03g123580.4 40 21 50 52 11 3 3 4 22 16 34 1 38 45 184 LL-diaminopimelate aminotransferase (AHRD V3.3 *-* AT3G14280.1) Solyc03g123590.4 983 1991 3482 2513 2994 3437 3251 2689 2440 1455 2795 2780 992 2396 1657 Remorin (AHRD V3.3 *** A0A200Q464_9MAGN) AT1G53860 Solyc03g123600.4 246 211 170 323 167 150 189 198 172 140 150 140 222 243 216 Alanine aminotransferase (AHRD V3.3 *** Q9S768_ORYSA) Solyc03g123610.4 758 1049 1272 1260 1196 1234 1281 1459 1602 1323 976 1335 1747 1522 1216 Alanine aminotransferase 2 (AHRD V3.3 *** A0A2G3D1D6_CAPCH) AT1G17290 Solyc03g123620.4 455 851 1641 1005 626 980 752 878 1235 706 2879 1242 689 854 1258 Pectinesterase (AHRD V3.3 *** A0A2G3D1E1_CAPCH) AT1G53840 Solyc03g123630.4 6248 7686 14087 13918 8000 7184 6859 8275 18656 14649 24103 15694 8049 10996 14829 pectin methylesterase pmeu1 AT3G14310 Solyc03g123640.3 888 925 731 742 690 762 700 824 802 692 650 779 915 939 897 Pumilio-like protein 23 (AHRD V3.3 *** A0A2G2WPL0_CAPBA) AT1G72320 Solyc03g123650.3 16 14 72 30 58 50 65 66 14 34 47 25 23 24 47 Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *-* A0A2U1MB88_ARTAN) Solyc03g123660.3 1769 1127 1299 1090 1140 1253 1266 1139 982 1357 1469 948 1187 1161 1252 ubiquitin conjugating enzyme 2 AT1G17280 Solyc03g123670.3 5 35 53 35 61 86 51 54 39 9 40 44 5 38 32 60S ribosomal protein L28-1 (AHRD V3.3 *-* A0A2G2WKZ6_CAPBA) Solyc03g123680.1 115 64 43 51 37 26 19 41 35 35 89 52 25 67 53 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LDD8_ARTAN) AT1G72310 Solyc03g123690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1L356_ARTAN) Solyc03g123700.4 388 577 655 588 738 740 735 672 709 399 624 567 535 726 652 muscle M-line assembly protein (AHRD V3.3 *** AT1G53800.3) AT1G53800 Solyc03g123710.3 42 8 45 55 20 31 33 24 61 47 81 34 20 14 42 Unknown protein Solyc03g123720.4 526 718 744 778 840 772 804 804 940 904 898 750 814 684 728 O-fucosyltransferase family protein (AHRD V3.3 *** F4HTC2_ARATH) AT5G50420 Solyc03g123730.4 820 1341 1290 1402 1347 1625 1637 1363 1640 1016 1389 1090 1737 1526 1415 26S protease regulatory subunit 7 (AHRD V3.3 *** A0A1U8FAJ3_CAPAN) AT1G53750 Solyc03g123740.4 1530 1883 2370 1663 1810 1804 1842 2198 2428 2836 2132 2284 1787 1600 1871 Ovule receptor-like kinase 28 (AHRD V3.3 *** A4GWX5_SOLCH) AT1G53730 Solyc03g123750.3 553 322 273 327 541 459 462 510 264 357 302 315 264 312 420 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4JFU8_ARATH) AT3G14360 Solyc03g123760.3 935 708 658 698 555 578 653 712 907 805 571 753 679 890 820 phytoene desaturase AT4G14210 Solyc03g123770.1 1 0 5 12 0 0 0 0 0 0 9 0 1 1 0 Unknown protein Solyc03g123780.4 328 148 302 232 61 51 56 66 116 354 236 120 159 160 177 Receptor kinase (AHRD V3.3 *** B8XA57_GOSBA) AT1G72300 Solyc03g123790.4 385 298 558 404 289 349 406 345 347 345 498 258 387 373 290 Vacuolar cation/proton exchanger (AHRD V3.3 *** K4DFQ6_SOLLC) AT1G55730 Solyc03g123800.3 2119 2689 2682 2864 3125 2602 2867 3554 2549 3091 2432 2708 3340 2767 1947 MAP kinase kinase 2 AT3G21220 Solyc03g123810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc ion binding protein (AHRD V3.3 --* AT1G55915.4) Solyc03g123820.2 0 1 0 9 1 5 1 4 0 1 0 0 1 0 0 Glucose-methanol-choline (GMC) oxidoreductase family protein (AHRD V3.3 *** A0A2U1M607_ARTAN) AT1G73050 Solyc03g123830.4 2274 4346 1709 2806 3832 3048 2902 5007 3875 4865 1913 3614 7230 3195 2393 D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** A0A1U8G334_CAPAN) AT1G17745 Solyc03g123840.4 6632 5608 4124 4142 4369 3947 4021 4125 3321 4271 3635 4000 4013 4006 4026 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** Q9LU37_ARATH) AT3G21215 Solyc03g123850.2 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g123860.4 657 416 815 494 222 222 243 250 573 890 888 372 453 485 698 Receptor-like protein kinase INRPK1c AT1G73080 Solyc03g123870.3 1255 1598 1131 1085 1379 1156 1280 1697 1554 1312 1095 1318 1445 1281 939 Exocyst complex component EXO84B (AHRD V3.3 *** A0A1U8FU49_CAPAN) AT5G49830 Solyc03g123880.3 1017 1308 1202 1237 1565 1437 1483 1514 1112 1226 938 1163 1205 1246 1038 Glutamyl-tRNA reductase-binding protein, chloroplastic (AHRD V3.3 *** A0A2G2WPF5_CAPBA) AT3G21200 Solyc03g123890.4 801 792 589 664 535 505 615 584 669 526 529 615 715 850 567 Calcium-transporting ATPase (AHRD V3.3 *** A0A2G3A3P1_CAPAN) Solyc03g123900.3 1226 1291 1224 1183 1053 1133 1136 1300 1239 1364 1303 1176 1386 1161 1124 alpha-1,2-Mannosidase (AHRD V3.3 *** A0A2G3D1E2_CAPCH) AT1G51590 Solyc03g123910.3 3587 3084 2703 3220 2621 3021 2725 3161 2307 3175 2269 2852 2589 2887 3093 Kelch repeat-containing protein (AHRD V3.3 *** A0A2G3D189_CAPCH) AT1G51540 Solyc03g123920.3 3260 2319 1563 1608 1594 1368 1197 2413 1765 3092 1182 2215 1999 1768 1453 Ubiquitin-specific protease family C19 protein (AHRD V3.3 *** A0A2K3NKS0_TRIPR) AT1G16860 Solyc03g123930.1 104 125 136 155 117 128 164 85 87 82 109 81 107 106 211 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* A0A2U1NLT0_ARTAN) Solyc03g123940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L44 (AHRD V3.3 *** A0A2G3CYG5_CAPCH) Solyc03g123950.4 416 421 261 397 332 371 372 426 380 385 279 328 353 337 384 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A1P8AS62_ARATH) AT1G50440 Solyc03g123960.3 1691 1457 1325 1451 1262 1281 1275 1247 1184 1269 1200 1208 1298 1369 1254 Mediator of rna polymerase ii transcription subunit 8 (AHRD V3.3 *** A0A314KGT5_NICAT) AT2G03070 Solyc03g123970.1 0 0 0 0 0 2 3 0 0 0 0 0 1 0 0 lipid-binding serum glycoprotein family protein (AHRD V3.3 *-* AT3G20270.3) Solyc03g123980.4 3217 2351 2105 1887 1895 1882 2060 2010 2102 2236 1771 2009 2089 2082 1995 Pumilio-like protein 2 (AHRD V3.3 *** A0A2G2WPH9_CAPBA) AT3G20250 Solyc03g123990.3 436 635 556 501 460 500 579 494 491 387 454 557 677 750 386 Mitochondrial carrier protein (AHRD V3.3 *-* A0A200R951_9MAGN) AT3G20240 Solyc03g124010.3 1542 1222 1228 1410 1221 1425 1541 1364 1389 1221 949 1155 921 1192 1222 p-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8AT95_ARATH) AT1G16800 Solyc03g124020.1 9 16 32 16 4 17 19 12 17 8 57 11 10 2 5 Auxin-induced protein 15A (AHRD V3.3 *** A0A2G3D1E4_CAPCH) AT4G31320 Solyc03g124030.4 1269 1070 1210 1039 996 1153 1288 977 907 753 1103 843 918 1053 1117 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** F4IBX4_ARATH) AT1G78915 Solyc03g124040.3 689 698 849 740 931 869 891 968 680 587 644 800 801 907 612 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** Q0WRV2_ARATH) AT1G78930 Solyc03g124050.3 0 0 0 3 0 0 0 0 0 0 0 0 7 3 0 Pollen receptor-like kinase 1 (AHRD V3.3 *** A0A2G2WPG8_CAPBA) Solyc03g124060.3 886 843 942 810 817 896 879 846 804 675 912 691 734 850 1056 Polyketide cyclase/dehydrase and lipid transport superfamily protein (AHRD V3.3 *** Q93YV2_ARATH) AT1G55960 Solyc03g124061.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g006715.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g124062.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g124064.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g124066.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc03g124068.1 573 498 383 447 502 445 491 564 448 555 356 512 429 482 466 Ent-kaurene synthase (AHRD V3.3 *** G5CV50_SOLLC) AT1G79460 Solyc04g004000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g004005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g005000.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g005010.4 468 408 330 354 336 457 354 404 312 273 404 299 364 265 297 Ribonuclease H domain (AHRD V3.3 *** A0A200QLE9_9MAGN) AT1G24090 Solyc04g005015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0W6G5_9ASPA) ATMG00810 Solyc04g005020.3 4 3 5 17 8 1 2 3 7 0 1 4 1 0 14 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1QGB4_ARTAN) AT1G24130 Solyc04g005030.4 1291 791 585 694 443 531 519 536 763 560 633 510 762 830 811 Phosphoglucosamine mutase family protein (AHRD V3.3 *** A0A2U1MUU8_ARTAN) AT5G17530 Solyc04g005040.1 137 219 643 177 129 216 214 173 237 260 1213 348 182 195 287 Metalloendoproteinase 1 (AHRD V3.3 *** A0A1J3JDB5_NOCCA) AT1G24140 Solyc04g005050.1 258 187 263 125 75 96 76 75 125 143 459 145 216 181 242 Metalloendoproteinase 1 (AHRD V3.3 *** A0A1J3IKZ8_NOCCA) AT1G24140 Solyc04g005060.3 962 520 342 506 304 364 361 421 719 864 524 891 474 593 639 TPX2 domain-containing protein (AHRD V3.3 *** A0A1Q3CMC0_CEPFO) AT1G70100 Solyc04g005070.3 1059 1716 972 1388 1330 1273 1128 1300 3780 3805 3114 5986 1441 2148 1268 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1N7S7_ARTAN) Solyc04g005080.3 1000 1796 981 960 1148 999 878 1312 1163 1233 728 1035 1545 1288 1245 Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 *** A0A2G3CFN5_CAPCH) AT1G59900 Solyc04g005090.4 211 289 345 230 350 387 360 322 203 278 101 204 253 194 140 Cofactor assembly of complex C (AHRD V3.3 *** A0A1P8ASR1_ARATH) AT1G59840 Solyc04g005100.3 1252 1537 522 750 823 771 582 822 752 1068 268 362 2290 500 334 transcription factor MYB1R1-like (AHRD V3.3 *** A0A2I4GKI8_9ROSI) AT1G70000 Solyc04g005110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (E,E)-germacrene B synthase (AHRD V3.3 *-* A0A2G2ZZ49_CAPAN) Solyc04g005120.3 366 243 282 250 277 358 304 233 183 235 137 232 275 207 269 short hypocotyl in white light1 (AHRD V3.3 *-* AT1G69935.1) AT1G69935 Solyc04g005130.3 67 349 398 389 835 737 714 514 319 258 354 347 267 243 153 bHLH transcription factor 027 AT5G62610 Solyc04g005140.2 1 11 5 19 8 31 19 22 11 16 20 14 18 24 14 Uridine kinase (AHRD V3.3 *** A0A200QPY2_9MAGN) Solyc04g005150.4 2 5 0 2 6 1 2 8 1 3 0 1 2 1 0 Uridine kinase (AHRD V3.3 *-* A0A200QPY2_9MAGN) Solyc04g005160.3 528 584 525 378 350 346 333 377 692 856 1195 586 855 684 448 6-phosphogluconate dehydrogenase, decarboxylating (AHRD V3.3 *** A0A1U8F1N4_CAPAN) AT3G02360 Solyc04g005170.1 1 14 0 11 42 19 27 25 5 3 0 4 7 4 0 Basic leucine zipper 43 (AHRD V3.3 *** A0A1U8H2I2_CAPAN) Solyc04g005180.4 33 69 41 77 94 65 105 109 86 44 32 62 49 60 19 Protein PHYLLO, chloroplastic (AHRD V3.3 *-* A0A2G2WS56_CAPBA) Solyc04g005190.2 109 180 147 142 262 207 287 240 222 144 146 140 106 173 164 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (AHRD V3.3 *-* I0F813_9BACI) AT1G68890 Solyc04g005200.4 144 195 231 285 309 331 408 184 163 119 220 177 148 207 271 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (AHRD V3.3 *** A0A1V0LBF9_9ENTR) Solyc04g150100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g005220.3 0 0 0 0 2 3 2 0 0 0 1 0 0 0 0 Transcription factor bHLH62 (AHRD V3.3 *** A0A2G2WBN0_CAPBA) Solyc04g005230.3 20 42 20 18 27 42 14 47 56 43 18 48 64 60 27 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KK17_ARTAN) Solyc04g005240.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 root meristem growth factor 2-like (AHRD V3.3 --* XP_015954578.1) Solyc04g005250.4 1046 396 444 557 153 176 138 107 344 355 661 364 298 684 1745 cytosine-5 DNA methyltransferase1 AT5G15380 Solyc04g005260.3 33 13 25 29 5 19 20 7 19 22 37 42 15 17 34 DNA-3-methyladenine glycosylase I (AHRD V3.3 *-* B6U9I4_MAIZE) Solyc04g005270.1 5672 2328 2237 2273 1752 1557 1600 1786 2401 2843 2489 2498 2144 2279 3079 Phosphatidylinositol 4-kinase gamma 7 (AHRD V3.3 *** A0A1U8GNT8_CAPAN) AT2G03890 Solyc04g005280.4 816 645 709 606 562 581 539 518 487 503 689 565 689 674 648 bHLH transcription factor 028 AT1G69010 Solyc04g005290.3 459 514 704 596 479 509 593 442 467 426 570 473 503 458 653 18S pre-ribosomal assembly protein gar2-like protein (AHRD V3.3 *-* AT2G03810.7) AT2G03810 Solyc04g005300.4 45 49 60 47 42 57 66 46 72 46 24 39 74 46 47 D-aminoacyl-tRNA deacylase (AHRD V3.3 *-* A0A1U8F9A2_CAPAN) Solyc04g005310.3 690 949 1176 1089 1154 1246 1370 1052 744 774 879 899 1064 1053 1092 translin-associated factor X AT2G03780 Solyc04g005320.3 574 363 493 355 160 163 103 190 429 327 333 347 194 363 365 MADS box transcription factor (AHRD V3.3 *** Q8L5F3_DAUCA) AT2G03710 Solyc04g005330.3 4547 2883 2419 2447 1961 2022 2045 2009 2052 2558 2149 2435 2455 2616 2775 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1N878_ARTAN) AT4G18905 Solyc04g005340.2 3145 6557 5779 4993 4542 3750 4183 4757 5688 4806 5467 4510 7548 6300 6756 Alpha-1,4-glucan-protein synthase [udp-forming] 1 (AHRD V3.3 *** A0A1J6JE64_NICAT) AT3G02230 Solyc04g005350.3 520 500 659 594 688 823 752 671 524 440 708 565 541 548 712 Glycine-rich RNA-binding protein 3, mitochondrial (AHRD V3.3 *** A0A2I0XDS6_9ASPA) AT1G13690 Solyc04g005360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** W0FG45_POPTR) AT5G05260 Solyc04g005370.2 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** W0FG45_POPTR) AT5G05260 Solyc04g005380.3 1504 433 262 483 307 473 254 358 511 805 692 792 218 773 2208 Ninja-family protein AFP3 (AHRD V3.3 *** A0A2G3CFM6_CAPCH) AT1G69260 Solyc04g005390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LRR receptor-like kinase family protein (AHRD V3.3 *** A0A072U6P6_MEDTR) Solyc04g005400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g005410.3 45 11 7 21 2 3 3 8 3 3 8 3 1 3 50 Ureide permease (AHRD V3.3 *** A0A2R6PBP7_ACTCH) AT2G03530 Solyc04g005420.4 1868 1910 1622 2514 1364 1595 1659 1501 2686 2951 3107 2241 2410 2747 3736 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* A0A1P8AZV6_ARATH) AT1G13830 Solyc04g005430.4 183 371 290 381 364 434 484 418 422 336 344 367 311 384 357 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PA46_ARTAN) AT2G03480 Solyc04g005440.1 11 9 10 17 9 8 7 9 21 19 16 17 9 12 26 C2H2-like zinc finger protein (AHRD V3.3 *** A0A2U1QL40_ARTAN) AT1G26610 Solyc04g005450.3 958 532 483 719 475 561 529 481 552 604 478 480 566 578 767 Purple acid phosphatase (AHRD V3.3 *** A0A2G3CFK1_CAPCH) AT1G13900 Solyc04g005460.1 10 33 43 42 20 49 33 28 39 15 14 40 47 45 55 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QNY2_9MAGN) Solyc04g005470.3 12 35 85 50 74 48 35 12 46 23 103 43 14 30 90 Remorin (AHRD V3.3 *** A0A200PRB9_9MAGN) AT1G13920 Solyc04g005480.1 696 729 1719 312 282 291 236 280 390 638 1784 611 745 475 801 nodulin-related protein 1-like (AHRD V3.3 *** A0A2I4FXG1_9ROSI) AT2G03440 Solyc04g005490.3 1118 868 1099 865 758 796 825 844 975 982 842 902 825 958 971 Appr-1-p processing enzyme family protein (AHRD V3.3 *** A0A2U1M8F6_ARTAN) AT1G69340 Solyc04g005500.3 726 932 1050 1086 1219 1330 1250 1146 1028 747 820 959 1035 1092 1205 T-box transcription factor%2C putative (DUF863) (AHRD V3.3 *** AT1G69360.1) AT1G69360 Solyc04g005510.3 1682 1763 1533 1388 1527 1267 1254 1324 1114 1105 1079 1257 2285 1667 1426 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A1U8HES8_CAPAN) AT1G13950 Solyc04g005520.3 247 236 204 405 280 297 238 278 283 296 381 236 384 225 246 Amino acid kinase family protein (AHRD V3.3 *** A0A2U1KEH8_ARTAN) AT1G26640 Solyc04g005530.3 2068 1202 806 2096 1282 886 759 1441 1029 2600 866 1720 871 914 766 transmembrane protein (AHRD V3.3 *-* AT3G11810.1) AT3G11810 Solyc04g005540.3 1062 819 752 757 418 568 519 542 888 686 605 681 589 948 1107 Pvr4 (AHRD V3.3 *** A0A1D5AHY8_CAPAN) Solyc04g005550.2 432 258 201 173 9 44 38 36 231 221 217 148 394 391 306 Tsw (AHRD V3.3 *** A0A1C9TCM9_CAPCH) Solyc04g005555.1 44 8 29 57 5 6 5 0 79 15 68 32 27 30 63 CASP-like protein 4A1 isoform X1 (AHRD V3.3 *-* XP_010108714.1) Solyc04g005560.3 209 428 571 386 628 601 603 690 690 443 486 525 398 475 390 ARF guanine-nucleotide exchange factor GNOM (AHRD V3.3 *** A0A1U8HBB7_CAPAN) AT1G13980 Solyc04g005570.4 151 193 214 129 190 181 199 156 197 141 127 200 252 238 170 Transmembrane emp24 domain-containing protein p24delta9 (AHRD V3.3 *** A0A2G2YDC2_CAPAN) AT1G26690 Solyc04g005580.1 28 90 64 102 142 73 102 68 62 51 51 86 59 61 101 GCK domain protein (AHRD V3.3 *-* A0A2K3PGF3_TRIPR) Solyc04g005590.3 612 656 876 634 723 816 753 683 524 521 796 545 737 691 756 Ribosomal L32p protein family (AHRD V3.3 *** Q5Q0D8_ARATH) AT1G26740 Solyc04g005600.3 19 32 18 28 20 3 3 6 17 15 26 10 48 24 38 Transcription factor (AHRD V3.3 *** A0A2G2Z3S3_CAPAN) Solyc04g005610.3 732 277 1 42 0 0 0 0 6 140 12 0 45 146 82 NAC domain-containing protein 2 (AHRD V3.3 *** NAP2_SOLLC) AT1G69490 Solyc04g005620.3 10 13 21 3 0 10 5 2 4 2 2 3 0 3 3 Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_SOLDE) Solyc04g005630.3 260 325 283 193 259 275 260 314 297 279 247 255 290 352 231 Transcription termination factor 3, mitochondrial (AHRD V3.3 *** A0A1J3JQF8_NOCCA) AT4G02990 Solyc04g005640.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Ribonuclease (AHRD V3.3 *** Q4ADQ2_9CARY) Solyc04g005650.3 1176 1140 1163 1020 743 986 870 799 1178 945 961 892 1429 1246 1406 Peroxisomal nicotinamide adenine dinucleotide carrier (AHRD V3.3 *** A0A2G2ZHF7_CAPAN) Solyc04g005653.1 25 29 26 22 26 32 22 27 23 17 25 27 38 14 11 Unknown protein Solyc04g005657.1 7 4 0 14 12 2 5 8 5 6 2 3 3 5 0 Unknown protein Solyc04g005660.4 0 4 1 0 0 2 0 0 6 1 0 0 0 1 0 transcription factor PRE6-like (AHRD V3.3 *** A0A2I4HLH0_9ROSI) Solyc04g005670.3 479 361 494 321 174 249 229 220 387 295 1203 233 410 361 721 F-box/kelch-repeat protein (AHRD V3.3 *** A0A2G3CYH7_CAPCH) AT1G14330 Solyc04g005680.4 4239 5084 5623 4323 5727 6380 5975 5607 3842 3593 4247 4392 5591 5448 4530 40S ribosomal protein S9 (AHRD V3.3 *** A0A1U8EPE0_CAPAN) AT5G39850 Solyc04g005690.4 10626 7314 4751 5633 5553 4895 5351 6415 5094 7036 4263 7169 5977 6353 3971 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (AHRD V3.3 *** F4HW92_ARATH) AT1G14650 Solyc04g005710.3 4 31 4 49 18 22 28 11 7 10 5 6 3 4 56 R2R3MYB transcription factor 88 Solyc04g005720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caleosin (AHRD V3.3 *** A0A200QL80_9MAGN) Solyc04g005730.3 537 488 388 343 503 449 479 425 411 368 458 402 526 521 405 Plant transposase (Ptta/En/Spm family) (AHRD V3.3 *-* F4I6H5_ARATH) Solyc04g005740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT4G12140 Solyc04g005750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF1336 domain-containing protein (AHRD V3.3 *-* A0A1Q3D2H4_CEPFO) Solyc04g005760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT4G12140 Solyc04g005770.3 15 16 7 15 27 9 23 21 10 17 10 27 5 11 6 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2ZHE2_CAPAN) AT2G02750 Solyc04g005780.1 40 29 33 44 27 40 46 29 24 26 46 21 35 28 78 Glyoxal oxidase (AHRD V3.3 *** A0A200PQ20_9MAGN) AT1G14430 Solyc04g005790.3 986 399 415 755 142 204 124 151 413 722 647 476 533 607 1113 Protein NRT1/ PTR FAMILY 4.6 (AHRD V3.3 *** A0A2G2YDU5_CAPAN) AT1G69850 Solyc04g005800.3 983 403 148 736 563 478 579 393 643 551 343 626 383 411 552 Homeobox-leucine zipper protein HOX16 (AHRD V3.3 *** A0A1U8EXU3_CAPAN) Solyc04g005810.3 9 15 28 27 12 13 14 6 37 25 15 30 30 15 23 Thioredoxin (AHRD V3.3 *** A0A2G2YE12_CAPAN) Solyc04g005820.4 208 166 198 188 135 126 185 124 190 216 191 161 180 124 194 DnaJ-like protein (AHRD V3.3 *** Q9SP09_TOBAC) Solyc04g005830.3 70 93 103 129 69 91 50 67 114 97 45 97 66 72 88 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KZ59_ARTAN) AT1G33290 Solyc04g005840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycerol-3-phosphate acyltransferase (AHRD V3.3 *** A0A0M4FCN7_9SOLA) Solyc04g005850.1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 Exocyst complex component EXO84A (AHRD V3.3 *** A0A2G2YKH9_CAPAN) AT1G10385 Solyc04g005860.3 2223 1253 2085 1662 1205 1424 1271 1329 1809 1540 2178 1882 1346 1773 2300 Protein ENHANCED DISEASE RESISTANCE 2 (AHRD V3.3 *** A0A1J3E5Z2_NOCCA) AT1G59650 Solyc04g005870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G2YDG5_CAPAN) Solyc04g005880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *-* S8CP16_9LAMI) Solyc04g005890.3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 F-box/FBD/LRR-repeat protein (AHRD V3.3 *** A0A2K3NAP3_TRIPR) Solyc04g005900.3 322 274 386 474 421 451 437 343 382 269 355 337 351 328 534 F-box/FBD/LRR-repeat protein (AHRD V3.3 *** A0A2G3CFK0_CAPCH) AT1G13570 Solyc04g005910.3 196 224 452 413 330 350 345 357 248 192 365 181 262 356 396 Protein nsp-interacting kinase 2 (AHRD V3.3 *** A0A314KJ76_NICAT) AT3G25560 Solyc04g005920.1 44 50 90 56 47 36 27 24 44 35 41 17 40 57 71 micronuclear linker histone polyprotein-like protein (AHRD V3.3 *** AT3G25590.1) AT3G25590 Solyc04g006930.3 220 302 312 818 365 421 665 595 445 1056 461 670 357 322 229 Protein kinase family protein (AHRD V3.3 *-* E5GBJ3_CUCME) Solyc04g006940.4 124 65 98 52 28 40 55 27 37 62 93 47 122 113 111 Unknown protein Solyc04g006950.4 0 8 10 6 4 1 3 3 1 0 12 0 0 3 3 Unknown protein Solyc04g006960.3 505 729 573 718 553 601 508 467 645 451 562 393 821 769 984 ABC transporter-like (AHRD V3.3 *** A0A200QID3_9MAGN) AT3G25620 Solyc04g006970.4 1066 773 1164 1692 760 908 996 997 1665 1346 1856 1981 824 1073 2371 Phosphoenolpyruvate carboxylase (AHRD V3.3 *** A6YM33_RICCO) AT1G68750 Solyc04g006980.1 175 224 174 210 91 140 81 120 323 261 256 266 142 141 76 TCP transcription factor 22 AT1G68800 Solyc04g006983.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc04g006987.1 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 Unknown protein Solyc04g006990.3 39 56 103 70 107 101 90 75 149 28 97 56 63 79 128 bHLH transcription factor 029 Solyc04g007000.2 3527 1289 1369 465 5 1 1 4 977 2822 2554 255 154 643 1025 AP2/B3 transcription factor family protein (AHRD V3.3 *** A0A2U1MEM3_ARTAN) Solyc04g007010.3 10 1 10 4 32 67 78 19 7 10 23 2 8 5 2 Sn-2 protein (AHRD V3.3 *** Q39467_CAPAN) Solyc04g007015.1 1208 670 1001 704 466 496 453 375 776 915 1092 450 1020 661 901 BRO1 domain-containing protein (AHRD V3.3 *** A0A2U1KJ61_ARTAN) AT1G13310 Solyc04g007030.4 39 18 3 21 6 6 12 5 10 13 9 8 18 10 89 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc04g007050.4 8 0 6 0 5 2 2 2 2 1 1 0 0 0 17 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc04g007060.4 1863 2038 1415 1307 1050 826 791 1006 1493 2006 1432 1273 2907 1815 1519 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc04g007070.3 8360 7157 7777 4554 2426 2175 2783 2317 4582 9666 6197 4166 13619 6024 4009 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc04g007090.1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1Q881_ARTAN) Solyc04g007100.4 196 197 212 267 204 219 232 256 275 239 201 263 214 281 268 Phosphatase 2A regulatory A subunit (AHRD V3.3 *** Q9S7C5_ORYSA) Solyc04g007110.4 389 258 350 262 297 353 336 271 226 257 228 286 222 236 301 transmembrane protein (AHRD V3.3 *** AT3G25805.1) AT3G25805 Solyc04g150101.1 5 1 2 4 0 0 0 0 1 1 3 9 0 0 0 Sn-2 protein (AHRD V3.3 *** Q39467_CAPAN) Solyc04g007120.4 7112 5199 7024 7711 6204 6573 6098 5802 5632 6883 7626 6515 7099 6339 7324 Ubiquitin receptor RAD23c (AHRD V3.3 *** A0A2G2WS01_CAPBA) AT3G02540 Solyc04g007130.1 191 101 217 67 68 60 57 46 109 121 346 58 120 117 242 hypothetical protein (AHRD V3.3 *** AT1G13360.1) Solyc04g007140.1 47 133 66 6 0 0 2 0 12 111 37 5 543 215 114 protein NIM1-INTERACTING 2-like (AHRD V3.3 *** XP_011071259.1) Solyc04g007150.3 109 189 90 92 79 56 63 107 170 133 53 131 149 162 72 Glycoside hydrolase family 31 (AHRD V3.3 *** A0A2U1PBY7_ARTAN) AT1G68560 Solyc04g007160.1 146 248 141 153 86 88 77 74 158 106 108 100 192 223 194 alpha-xylosidase 1-like (AHRD V3.3 *-* A0A2I4HUF9_9ROSI) Solyc04g007170.3 1055 845 797 911 466 545 509 315 654 636 1035 561 648 1084 1264 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2V7U7_CAPBA) AT3G25890 Solyc04g007190.4 1 6 0 5 0 1 2 4 2 3 11 5 2 7 0 Thioesterase-like protein (AHRD V3.3 *** B5B0E4_SOLHA) AT1G68260 Solyc04g007200.4 12 15 14 86 93 96 95 83 17 11 37 37 3 29 18 Methylketone synthase IIb (AHRD V3.3 *** E0YCS9_SOLLC) AT1G68260 Solyc04g007210.3 17 18 11 21 5 8 18 3 14 14 7 1 18 33 131 Zinc finger protein CONSTANS-LIKE 7 (AHRD V3.3 *** A0A2G2VK65_CAPBA) AT1G25440 Solyc04g007220.4 2447 1703 1799 1792 1531 1529 1554 1275 1747 1841 1883 1342 2437 1587 1606 translocase subunit seca (AHRD V3.3 *** AT1G13390.2) AT1G68490 Solyc04g007230.3 440 536 571 609 623 540 602 472 586 571 678 580 962 722 767 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *** A0A2U1Q5E5_ARTAN) AT1G25420 Solyc04g007240.1 9 3 0 5 3 0 1 0 1 0 7 3 0 1 1 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G3B611_CAPCH) AT1G68460 Solyc04g007243.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g007247.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G2X115_CAPBA) Solyc04g007250.1 10 6 22 11 0 0 0 1 7 9 1 0 19 5 2 transmembrane protein (AHRD V3.3 *** AT1G25400.2) AT1G68440 Solyc04g007260.4 106 108 249 316 243 225 292 261 181 136 227 187 167 231 263 Thioesterase-like protein (AHRD V3.3 *** B5B3P5_SOLLC) AT1G68260 Solyc04g007270.3 2966 1721 1589 1414 1563 1757 1655 1658 1519 1997 1419 1640 1332 1640 1617 PHD finger protein (AHRD V3.3 *** A0A2G2WSU8_CAPBA) AT1G33420 Solyc04g007280.3 6213 5647 3294 4111 5004 4035 3771 6068 4621 6095 3225 5250 4801 5008 3071 Nuclear pore complex protein NUP98A (AHRD V3.3 *** A0A2G3DE78_CAPCH) AT1G10390 Solyc04g007290.4 3 0 0 0 0 0 0 0 2 0 1 0 0 0 0 DUF639 domain-containing protein (AHRD V3.3 *** A0A1Q3DGQ0_CEPFO) Solyc04g007295.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc04g007300.4 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 bHLH transcription factor 030 Solyc04g007310.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Thaumatin (AHRD V3.3 *** A0A2U1PDY4_ARTAN) Solyc04g007320.3 165 125 192 40 5 6 7 3 55 134 144 15 213 122 82 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2U1PW75_ARTAN) AT5G17680 Solyc04g007330.3 245 282 158 130 137 104 75 98 130 92 94 125 271 235 220 DNA-binding HORMA (AHRD V3.3 *** A0A200QG98_9MAGN) AT1G67370 Solyc04g007340.4 237 317 522 477 402 535 411 479 506 404 418 409 476 453 456 hypothetical protein (DUF1639) (AHRD V3.3 *** AT1G25370.2) AT3G18295 Solyc04g007350.3 97 106 102 84 105 87 84 93 94 49 48 61 92 103 75 DUF1639 domain-containing protein (AHRD V3.3 *** A0A1Q3C214_CEPFO) AT3G18295 Solyc04g007360.1 4 27 13 32 84 58 80 52 17 13 19 19 4 8 2 cotton fiber protein (AHRD V3.3 *** AT1G68350.1) AT1G68350 Solyc04g007370.3 1228 1252 943 872 832 755 828 720 1047 919 1155 819 1226 1185 1076 Chaperone protein dnaJ 16 (AHRD V3.3 *** A0A2G2WSF3_CAPBA) AT1G68370 Solyc04g007380.3 125 37 82 20 0 0 0 0 12 44 32 1 132 66 22 Receptor-like protein kinase (AHRD V3.3 *** D3G6F0_CAPAN) AT5G38280 Solyc04g007390.4 57 57 46 49 42 56 56 34 56 57 54 23 34 28 46 Protein kinase family protein (AHRD V3.3 *** A0A1P8BDJ0_ARATH) AT1G25390 Solyc04g007400.4 294 673 688 1038 461 280 470 294 580 372 337 341 820 1127 1216 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IKL5_ARATH),Pfam:PF13561 Solyc04g007410.4 316 213 348 431 225 221 233 162 289 241 336 238 198 273 476 transmembrane protein (AHRD V3.3 *-* AT3G45050.4) AT3G45050 Solyc04g007420.4 213 142 78 142 111 101 96 128 141 191 137 156 113 147 137 RNAse P, Rpr2/Rpp21 subunit (AHRD V3.3 *-* A0A2U1KVN4_ARTAN) AT5G41270 Solyc04g007425.1 196 93 82 126 110 101 152 115 64 110 64 116 58 88 154 Unknown protein Solyc04g007430.2 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 031 Solyc04g007440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3CD35_CAPCH) AT2G30310 Solyc04g007450.4 198 176 239 202 111 89 144 117 164 179 195 144 165 287 268 Alpha/beta hydrolase family protein (AHRD V3.3 *** Q8RX69_ARATH) AT1G15060 Solyc04g007460.4 4227 2389 2017 2689 1559 1437 1582 1401 1805 2312 2583 1728 1612 2096 3449 Phox/Bem1p (AHRD V3.3 *** A0A200QUY9_9MAGN) AT2G01190 Solyc04g007470.3 100 36 207 132 158 139 130 126 85 131 232 133 80 153 508 Drought responsive Zinc finger protein AT1G68190 Solyc04g007480.1 9 17 64 31 59 98 58 37 55 14 19 26 41 30 43 Unknown protein Solyc04g007490.3 271 222 179 145 15 6 18 12 193 231 229 75 323 191 159 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc04g007500.1 318 265 89 201 47 63 42 27 181 182 97 55 161 84 142 RING-H2 finger protein 2B (AHRD V3.3 *** A0A2U1PWM9_ARTAN) AT1G15100 Solyc04g007510.4 484 476 269 317 266 375 354 386 345 271 203 298 257 369 343 Helicase (AHRD V3.3 *** A0A200QUR7_9MAGN) AT2G01130 Solyc04g007520.3 825 406 518 411 358 369 373 323 373 517 595 445 425 316 397 CDP-diacylglycerol--serine O-phosphatidyltransferase 1 (AHRD V3.3 *** A0A2G3CFI4_CAPCH) AT1G15110 Solyc04g007530.3 428 515 499 462 241 260 243 219 431 400 317 305 370 394 260 Protein DETOXIFICATION (AHRD V3.3 *** A0A328D6Y5_9ASTE) AT1G71140 Solyc04g007540.3 157 171 119 222 180 205 217 169 133 183 136 118 147 88 314 Protein DETOXIFICATION (AHRD V3.3 *** A0A218W6C6_PUNGR) Solyc04g007550.4 7234 12067 7977 9050 11009 10818 10049 11491 8410 10082 6504 9866 11236 9993 6567 ATP synthase subunit beta (AHRD V3.3 *** A0A2G2WS30_CAPBA) AT5G08670 Solyc04g007560.3 5081 3433 3495 5122 3053 2977 3337 3728 2658 4799 4284 4109 4718 3589 3531 BRO1 domain (AHRD V3.3 *** A0A200QUU8_9MAGN) AT1G15130 Solyc04g007570.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6PGV6_ACTCH) AT1G71120 Solyc04g007580.1 117 58 89 18 6 5 6 9 7 28 238 45 30 36 80 DUF4228 domain-containing protein (AHRD V3.3 *** A0A1Q3CT45_CEPFO) AT3G03280 Solyc04g007585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g007590.3 7 0 0 52 0 1 1 0 0 0 8 2 14 3 8 WAT1-related protein (AHRD V3.3 *** K4BNR6_SOLLC) AT3G30340 Solyc04g007600.4 729 527 518 703 545 688 626 555 338 441 533 623 467 537 639 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* A0A2U1L203_ARTAN) AT2G01275 Solyc04g007610.3 1276 1039 1118 1014 950 1187 1167 921 879 1019 1183 938 1134 1056 1081 Sulfhydryl oxidase (AHRD V3.3 *** A0A2G2ZHI0_CAPAN) AT2G01270 Solyc04g007620.1 0 3 0 0 0 0 0 0 5 1 3 0 2 0 2 Mediator of RNA polymerase II transcription subunit (AHRD V3.3 *** Q9ZU37_ARATH) Solyc04g007630.2 0 5 1 1 0 0 0 0 0 0 0 0 2 8 222 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6PB10_ACTCH) AT1G71050 Solyc04g007640.3 401 715 825 635 1070 960 1086 914 862 574 961 686 691 585 562 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WRT2_CAPBA) AT1G71020 Solyc04g007650.4 399 350 516 525 474 565 557 400 286 327 369 275 334 351 612 1-phosphatidylinositol-3-phosphate 5-kinase-like protein (AHRD V3.3 *** A0A2K3P1Y5_TRIPR) AT1G71010 Solyc04g007660.1 629 653 476 816 556 409 366 573 384 727 570 442 995 597 506 NHL domain-containing protein (AHRD V3.3 *** Q9ZNQ5_ARATH) AT2G01410 Solyc04g007670.1 20 62 33 49 106 43 43 61 76 123 54 32 64 49 40 leucine-rich repeat extensin-like protein 3 (AHRD V3.3 --* XP_022878514.1) AT1G70990 Solyc04g007680.4 0 0 3 0 0 5 11 2 0 0 0 0 0 0 0 Sn-2 protein (AHRD V3.3 *** Q39467_CAPAN) Solyc04g007690.3 314 628 196 455 326 239 222 235 913 844 1098 498 137 179 210 SlPIN3 AT1G70940 Solyc04g007700.3 405 298 404 378 307 303 387 234 348 367 498 310 268 298 473 transmembrane protein (AHRD V3.3 *** AT1G14990.1) AT1G14990 Solyc04g007710.3 2341 3123 2621 2794 2994 2805 2842 3211 4937 3284 2491 3126 2592 2994 2207 mitogen-activated protein kinase 14 Solyc04g007720.3 236 241 393 279 332 431 262 285 346 277 428 331 270 379 299 HMG-Y-related protein A-like (AHRD V3.3 *-* XP_010312913.1) Solyc04g007730.3 269 289 533 462 428 484 459 470 437 316 405 428 380 339 347 fold protein (AHRD V3.3 *** AT1G23110.7) AT1G70900 Solyc04g007740.1 0 1 0 2 0 0 3 0 0 0 0 0 3 0 0 hypothetical protein (AHRD V3.3 --* AT1G61170.1) Solyc04g007750.4 0 0 3 0 7 1 2 2 0 1 0 0 0 0 1 Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN) Solyc04g007760.3 0 0 0 4 0 0 0 0 1 14 33 8 1 0 4 Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN) Solyc04g150102.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN) Solyc04g007765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN) Solyc04g150103.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Sn-1 protein (AHRD V3.3 *-* Q42393_CAPAN) Solyc04g007770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN) Solyc04g007780.3 54 118 208 271 5 24 13 5 81 86 70 39 98 108 479 Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN) Solyc04g007790.3 128 171 170 291 3 22 4 14 212 131 103 42 401 105 396 Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN) Solyc04g150104.1 0 1 2 1 29 69 52 38 2 14 18 5 0 0 0 Kirola (AHRD V3.3 *** A0A2G2WRW0_CAPBA) AT1G70830 Solyc04g007800.4 8 11 13 12 0 0 1 0 4 3 2 1 9 4 17 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LCF2_ARTAN) Solyc04g007810.1 1 0 0 6 0 0 0 0 0 1 2 0 14 0 2 protein PELPK1 (AHRD V3.3 *-* XP_004242916.1) AT5G09520 Solyc04g007820.3 477 267 404 317 45 79 36 25 213 192 490 193 236 556 379 Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN) Solyc04g007823.1 30 23 40 38 1 1 2 0 23 19 37 21 12 24 10 Kirola (AHRD V3.3 *-* A0A1U8F0U0_CAPAN) Solyc04g007825.2 105 16 300 193 50 65 60 20 184 110 349 208 58 50 23 Kirola (AHRD V3.3 *** A0A1U8GVS3_CAPAN) Solyc04g007840.3 279 208 245 292 223 258 266 194 178 197 335 199 271 251 220 hypothetical protein (AHRD V3.3 *** AT1G23150.1) AT1G23150 Solyc04g007850.3 654 763 633 495 639 535 604 522 421 501 457 566 926 837 385 Protein BCCIP homolog (AHRD V3.3 *** A0A1U8GMK4_CAPAN) AT2G44510 Solyc04g007855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc04g007860.3 4413 4126 3815 4324 4134 4036 3990 4286 3101 3491 3951 3296 4008 3837 4344 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** A0A2U1N0Z9_ARTAN) AT2G01600 Solyc04g007870.3 339 653 497 576 608 774 678 542 648 382 533 363 597 611 570 Myosin-binding protein 1 (AHRD V3.3 *** A0A2G2WRT8_CAPBA) AT1G70750 Solyc04g007880.4 1600 966 1571 1091 615 691 721 495 624 861 1176 626 1197 944 1030 Cysteine-rich receptor-like protein kinase 10 (AHRD V3.3 *** A0A2G3CFD2_CAPCH) AT1G70740 Solyc04g007890.3 1342 3488 4345 3757 4315 4490 4147 3677 2715 2267 3787 3608 2732 3388 2608 Hmg-y-related protein a (AHRD V3.3 *-* A0A314LC60_NICAT) AT1G14900 Solyc04g007900.3 255 83 111 88 68 49 60 55 141 148 207 101 121 107 130 protein PLANT CADMIUM RESISTANCE 2-like (AHRD V3.3 *** A0A2G2ZHD1_CAPAN) Solyc04g007910.3 742 1463 1285 1320 2329 2192 2136 2885 1029 1159 1034 2051 923 1224 765 Glucan endo-1,3-beta-glucosidase 3, putative, expressed (AHRD V3.3 *** Q8H822_ORYSJ) AT2G01630 Solyc04g007920.1 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 B-cell receptor-associated-like protein (AHRD V3.3 *** Q9FFJ0_ARATH) Solyc04g007925.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200QYA7_9MAGN) Solyc04g007940.4 1 77 68 89 157 112 122 143 88 45 99 41 13 31 89 Cytochrome P450 (AHRD V3.3 *** A0A2U1Q1Z2_ARTAN) Solyc04g007950.4 876 680 688 969 869 813 771 557 480 793 765 320 1119 478 526 Cysteine-rich repeat secretory protein 60 (AHRD V3.3 *** A0A2G3CFE1_CAPCH) Solyc04g007960.4 87 22 67 121 28 24 28 29 45 35 55 19 35 70 125 Caleosin (AHRD V3.3 *** A0A200QL80_9MAGN) AT1G70680 Solyc04g007970.3 4849 2193 2276 2425 2120 1947 1969 1616 1939 1915 2580 1750 1878 1797 4051 Ubiquitin-conjugating enzyme variant (AHRD V3.3 *** V5KX13_SOLLC) AT1G70660 Solyc04g007980.3 639 346 369 241 272 164 199 268 320 533 356 305 427 465 558 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** O80850_ARATH) Solyc04g007990.1 33 44 53 59 59 62 43 48 200 51 24 82 109 140 158 hypothetical protein (AHRD V3.3 *** AT1G67920.1) AT1G67920 Solyc04g008000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent protein kinase (AHRD V3.3 *-* CDPK_DAUCA) AT1G24620 Solyc04g008010.4 644 704 607 691 726 679 715 636 659 639 563 640 710 851 534 Protein VAC14-like protein (AHRD V3.3 *** A0A2G3CFD6_CAPCH) AT2G01690 Solyc04g008020.3 3315 1228 1456 1299 814 955 766 667 974 1712 1544 876 789 1133 1883 RING/U-box superfamily protein (AHRD V3.3 *** Q93YQ5_ARATH) AT1G68070 Solyc04g008030.2 335 296 306 265 183 208 217 193 205 183 256 225 421 479 343 Cleavage and polyadenylation specificity factor subunit 3-II (AHRD V3.3 *** A0A2G3CFF4_CAPCH) AT2G01730 Solyc04g008040.4 704 1327 1395 1378 1561 1616 1822 1685 2241 1300 1579 1668 1639 1470 1767 Microtubule-associated protein 70 (AHRD V3.3 *** A0A200QNX4_9MAGN) AT1G24764 Solyc04g008050.4 1502 1628 1613 1503 1522 1765 1866 1741 1401 1555 1282 1429 1817 1829 1453 Two-component response regulator (AHRD V3.3 *** A0A2G2WRM9_CAPBA) AT2G01760 Solyc04g008060.3 155 805 877 1269 472 431 403 434 986 430 492 625 1350 1276 692 Vacuolar iron transporter (AHRD V3.3 *** C4B8E3_TULGE) AT2G01770 Solyc04g008070.3 1 0 8 3 1 1 4 3 4 4 11 5 2 14 4 cyclinSDS AT1G14750 Solyc04g150105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Proteinase inhibitor I3 (AHRD V3.3 *** A0A200Q524_9MAGN) Solyc04g008080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** K4BNW4_SOLLC) AT5G42655 Solyc04g008090.4 8 33 34 13 17 13 29 29 13 19 34 28 33 19 22 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1NTE5_ARTAN) AT2G01818 Solyc04g008100.3 23 45 12 0 0 0 0 0 8 7 65 2 13 47 63 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2ZH40_CAPAN) Solyc04g008110.3 550 1875 2590 2584 2688 2872 3317 2456 2995 1320 1271 1831 2547 3332 3126 Histidine kinase 4 (AHRD V3.3 *** A0A2G3CFA2_CAPCH) AT2G01830 Solyc04g008120.3 1 7 14 7 9 17 13 25 9 7 5 2 2 0 15 Hero resistance protein (AHRD V3.3 *** Q8GSM1_SOLLC) Solyc04g008150.3 10 5 0 0 0 8 7 3 4 5 0 2 0 5 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN) Solyc04g008130.3 0 6 10 1 6 13 24 10 3 0 1 3 2 7 4 Hero resistance protein (AHRD V3.3 *-* Q8GSM1_SOLLC) AT4G19060 Solyc04g008135.1 0 1 0 0 0 0 1 0 2 0 0 0 4 0 4 Hero resistance protein (AHRD V3.3 *-* Q8GSM1_SOLLC) Solyc04g008170.1 3 3 8 1 0 0 0 0 1 1 0 1 2 3 14 hero resistance 3 Solyc04g008190.1 0 0 1 2 0 0 0 0 0 0 0 0 0 1 2 Hero resistance protein (AHRD V3.3 *-* Q8GSM1_SOLLC) Solyc04g008200.4 27 45 51 33 26 15 18 24 72 26 21 22 24 50 18 LES457048 hero resistance protein 1 homologue Solyc04g008205.1 244 305 344 251 165 178 185 151 258 224 222 187 244 337 269 Hero resistance protein (AHRD V3.3 *** Q8GSM1_SOLLC) Solyc04g008210.2 298 145 181 94 26 18 4 9 56 80 137 20 99 134 248 ETAG-A3 AT2G01850 Solyc04g008220.4 190 160 161 155 133 130 133 116 164 94 235 182 146 173 160 Protein OBERON (AHRD V3.3 *-* A0A200Q0D6_9MAGN) Solyc04g008230.3 147 1207 154 835 5414 3903 3355 5552 747 790 320 724 888 711 488 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1PE89_ARTAN) AT1G48100 Solyc04g008240.3 2075 2356 2375 2927 2146 2433 2784 2638 1947 2621 2230 2362 2229 2333 2067 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A8MRW3_ARATH) AT1G14710 Solyc04g008245.1 3 6 16 12 13 11 6 3 3 0 8 4 5 4 7 Purple acid phosphatase (AHRD V3.3 *** A0A2I4E891_9ROSI) Solyc04g008260.3 123 87 66 47 127 110 81 72 72 106 62 43 50 62 19 Purple acid phosphatase (AHRD V3.3 *** Q6J5M7_SOLTU) AT1G14700 Solyc04g008270.4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 annexin 8 AT1G68090 Solyc04g008280.2 758 909 1207 1159 1216 1262 1106 1099 1193 1103 1358 1174 1016 1035 1246 4-hydroxy-4-methyl-2-oxoglutarate aldolase (AHRD V3.3 *-* A0A2G3CF74_CAPCH) AT5G16450 Solyc04g008290.4 5712 3538 3381 3072 1875 2072 2076 2187 2957 3271 3075 2547 3052 3093 3371 65-kDa microtubule-associated protein 6 (AHRD V3.3 *** A0A2G2W4Q4_CAPBA),Pfam:PF03999 AT2G01910 Solyc04g008300.1 489 280 361 465 424 536 481 563 296 396 403 449 214 279 293 Protein kinase superfamily protein (AHRD V3.3 *** F4ID59_ARATH) AT1G65950 Solyc04g008303.1 198 99 115 80 70 125 122 124 66 114 81 145 65 73 48 Unknown protein Solyc04g008307.1 103 67 48 52 32 58 55 38 47 40 44 32 29 41 67 Unknown protein Solyc04g008310.3 950 731 344 603 538 512 392 580 661 574 225 367 794 572 682 Glycosyltransferase (AHRD V3.3 *** A0A0A1WCD6_NICAT) Solyc04g008320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A0A1WCD6_NICAT) Solyc04g008330.1 24 472 116 285 875 735 593 924 272 167 99 277 292 381 89 Glycosyltransferase (AHRD V3.3 *** A0A0A1WCD6_NICAT) Solyc04g008340.2 1152 937 855 872 593 732 681 662 737 1017 716 755 902 870 1202 IAA-alanine resistance protein 1 (AHRD V3.3 *** A0A1U8GMT9_CAPAN) AT1G68100 Solyc04g008350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** A0A2U1N0Z9_ARTAN) AT1G25240 Solyc04g008370.3 12 4 0 20 1 1 6 12 14 6 38 10 18 12 14 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3CF44_CAPCH) Solyc04g008380.4 1850 1684 1756 1637 1563 1812 1721 1677 1632 1568 1604 1453 1381 1471 1701 GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN86_SOLLC) AT1G14685 Solyc04g008390.3 0 0 21 3 0 3 1 0 0 0 0 0 3 5 0 Receptor protein kinase (AHRD V3.3 *-* Q40096_IPOTF) Solyc04g008400.1 144 79 121 99 70 102 147 46 65 55 123 85 61 134 101 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3CF44_CAPCH) Solyc04g008403.1 10 13 12 11 3 15 16 11 4 15 12 11 7 11 6 Unknown protein Solyc04g008407.1 45 20 5 24 27 22 45 26 20 30 19 22 25 38 25 Unknown protein Solyc04g008410.3 203 120 71 75 91 102 111 127 117 116 61 96 87 134 83 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A1U8GMK9_CAPAN) AT1G03100 Solyc04g008420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, FYVE/PHD-type (AHRD V3.3 *** A0A2U1NER7_ARTAN) AT5G22260 Solyc04g008430.1 146 153 248 208 124 162 121 124 311 246 228 169 280 323 592 Serine/threonine-protein kinase BRI1-like 2 (AHRD V3.3 *** A0A2G2ZGZ4_CAPAN) AT2G01950 Solyc04g008440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)-linked oxidoreductase superfamily protein (AHRD V3.3 *** Q9SXC0_ARATH) AT1G59950 Solyc04g008450.4 54 77 56 34 105 107 95 67 49 40 51 52 74 72 106 Potassium transporter (AHRD V3.3 *** A0A2G3CF51_CAPCH) Solyc04g008460.4 4190 8064 5706 4997 5760 5986 5980 6091 4375 3948 4529 4439 9188 7478 5638 Ribosomal protein L15 (AHRD V3.3 *** A0A2G3CLB1_CAPCH) AT4G16720 Solyc04g008470.3 0 11 0 0 0 7 2 1 2 1 0 1 3 6 0 Defensin SD2 (AHRD V3.3 *** A0A2G2ZH52_CAPAN),Pfam:PF00304 Solyc04g008480.2 85 76 108 67 101 76 60 59 63 32 20 83 15 83 10 Homeodomain-like protein (AHRD V3.3 *** A0A2U1MEU4_ARTAN) AT1G14600 Solyc04g008490.2 349 672 833 628 852 773 765 785 777 516 728 693 885 798 783 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (AHRD V3.3 *** A0A1U8GMS4_CAPAN) AT2G02050 Solyc04g008500.4 440 442 329 454 688 612 737 648 693 337 515 487 472 399 573 Protein indeterminate-domain 6, chloroplastic (AHRD V3.3 *** A0A2G3CF47_CAPCH) AT2G02070 Solyc04g008510.3 2138 1873 1330 1829 1968 1546 1510 2112 1544 1973 1573 1831 1907 1743 1520 UBX domain-containing protein (AHRD V3.3 *** A0A2G3CF49_CAPCH) AT1G14570 Solyc04g008520.3 928 1379 1320 1607 1741 1569 1703 1553 1141 1028 1336 1284 1993 1350 1294 Outer envelope pore protein 37, chloroplastic (AHRD V3.3 *** A0A2G2V4I7_CAPBA) AT2G43950 Solyc04g008530.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 TRAF-like family protein (AHRD V3.3 *** F4J556_ARATH) AT3G17380 Solyc04g008540.3 1005 694 745 668 675 702 741 556 475 791 763 602 520 644 699 LeTH1tobamovirus multiplication 1 homolog AT1G14530 Solyc04g008550.4 669 811 681 670 881 824 875 808 868 662 660 727 829 811 776 Zinc finger transcription factor 31 AT2G02160 Solyc04g008560.3 1464 845 885 1061 953 781 895 737 716 1197 1040 895 981 778 834 PPR containing protein (AHRD V3.3 *** AT2G02148.5) AT2G02148 Solyc04g008570.4 343 351 68 203 501 474 489 454 272 275 90 167 177 82 142 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G3CF28_CAPCH) AT5G13770 Solyc04g008580.3 782 380 454 462 395 416 415 300 333 356 567 372 493 419 625 Ankyrin repeat (AHRD V3.3 *** A0A200R764_9MAGN) AT5G12320 Solyc04g008590.3 405 1029 964 938 1088 991 1201 1066 995 539 840 876 1281 1075 990 Pyruvate dehydrogenase E1 component subunit beta-like protein (AHRD V3.3 *** A0A2K3P721_TRIPR) AT2G34590 Solyc04g008600.4 15 199 240 148 288 255 256 298 206 110 117 222 144 276 61 Zinc knuckle (CCHC-type) family protein (AHRD V3.3 *** A0A1I9LR82_ARATH) AT3G02820 Solyc04g008610.3 1400 1273 978 977 950 1132 1099 1128 1318 1129 913 1046 1104 1378 1119 Histone acetyltransferase HAC12 (AHRD V3.3 *** A0A2G2X9A5_CAPBA) AT1G79000 Solyc04g008620.3 1664 2067 2776 3867 2396 3047 3488 2039 1721 2198 3852 2309 2168 2051 2904 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1PEE4_ARTAN) AT3G19830 Solyc04g008630.3 988 578 667 600 381 520 554 401 500 652 618 434 620 695 730 Autophagy-related protein 9 (AHRD V3.3 *** A0A1U8GWC6_CAPAN) AT2G31260 Solyc04g008640.3 753 1324 1154 1305 1548 1527 1617 1581 1171 1106 1103 1123 1243 1185 1098 conserved oligomeric Golgi complex subunit 3 (AHRD V3.3 *** A0A2I4FHP6_9ROSI) AT1G73430 Solyc04g008650.4 355 1709 1557 1451 2469 2520 2725 2664 1792 1066 1406 1571 842 1364 678 Inactive leucine-rich repeat receptor-like serinethreonine-protein kinase (AHRD V3.3 *** A0A314KSQ6_NICAT) AT1G10850 Solyc04g008660.4 708 817 856 927 991 1077 1138 933 842 698 917 845 807 866 960 ADP-ribosylation factor GTPase-activating protein AGD4 (AHRD V3.3 *** A0A2G3CEZ9_CAPCH) AT1G60860 Solyc04g008670.2 106 11 8 41 0 3 0 0 107 56 80 13 0 8 14 Gibberellin 2-beta-dioxygenase 8 (AHRD V3.3 *** A0A2G2X9B0_CAPBA) Solyc04g008680.4 3597 3609 3593 2899 2840 3548 3157 3010 3631 2386 3023 2862 4481 4475 4199 Cell division cycle and apoptosis regulator protein 1 (AHRD V3.3 *-* A0A1J3K1P6_NOCCA) AT2G03150 Solyc04g008690.3 641 600 893 816 1087 1128 1160 788 760 534 752 720 622 799 661 DUF3755 domain-containing protein (AHRD V3.3 *** A0A1Q3D9X4_CEPFO) AT1G60670 Solyc04g008700.3 1452 1592 1443 1415 1709 1630 1822 2084 1558 1411 1255 1598 1495 1685 1224 Pre-mRNA-processing protein 40C (AHRD V3.3 *** A0A2G2ZGP4_CAPAN) AT3G19840 Solyc04g008710.4 1664 2748 2634 2455 2847 3231 2827 2629 2408 1565 3032 1912 3150 2944 3648 Arginine/serine-rich-like splicing factor (AHRD V3.3 *-* Q9SII4_ARATH) AT3G24506 Solyc04g008720.4 289 642 851 852 938 1049 1109 1024 898 596 648 837 628 856 622 Katanin p80 WD40 repeat-containing subunit B1 homolog (AHRD V3.3 *** A0A2G3CEZ0_CAPCH) AT5G23430 Solyc04g008730.3 359 697 1324 1110 730 690 765 713 1997 1302 1574 1368 1094 1298 1914 Alpha-galactosidase (AHRD V3.3 *** K4BP29_SOLLC) AT5G08380 Solyc04g008740.3 5955 8752 8758 8535 9975 9106 9696 9971 9937 8028 8293 10005 10261 10144 9411 Pyruvate kinase (AHRD V3.3 *** A0A2G2X9H8_CAPBA) AT5G08570 Solyc04g008750.3 3057 1773 2253 1963 2428 2773 2524 2038 1669 1326 2351 1768 1811 1848 2226 Transcription elongation factor SPT4 homolog (AHRD V3.3 *** A0A1U8GMM7_CAPAN) AT5G63670 Solyc04g008760.3 124 197 132 167 204 211 256 259 201 166 104 167 175 188 102 Homoserine kinase (AHRD V3.3 *** A0A2G2X9A7_CAPBA) AT2G17265 Solyc04g008770.3 187 214 277 150 192 214 223 229 204 213 239 165 282 257 193 Mitochondrial intermembrane space import and assembly protein 40 (AHRD V3.3 *** A0A1J3K9V4_NOCCA) AT5G23395 Solyc04g008780.4 10 2 10 2 1 3 5 0 8 8 3 3 0 5 9 Tetraketide alpha-pyrone reductase 1 (AHRD V3.3 *** A0A1U8GMD2_CAPAN) AT4G35420 Solyc04g008790.1 596 810 552 633 679 491 543 620 596 510 345 546 880 789 510 Ribosomal protein L1 (AHRD V3.3 *** A0A200R8A3_9MAGN) Solyc04g008800.3 576 992 960 740 1068 955 1058 1046 751 554 839 708 1331 1036 799 protein translocase subunit (AHRD V3.3 *** AT3G51010.1) AT3G51010 Solyc04g008810.3 405 1250 1088 817 1228 1020 1213 986 692 537 815 762 1205 1155 809 40S ribosomal protein S26 (AHRD V3.3 *-* A0A2G2X986_CAPBA) AT3G56340 Solyc04g008820.3 28 973 686 538 1242 1074 963 1160 663 294 544 916 321 840 215 High mobility group B protein 7 (AHRD V3.3 *** A0A2G2X9D0_CAPBA) AT5G23420 Solyc04g008830.1 7 91 70 157 192 203 144 131 107 52 114 57 35 65 57 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A2R6PGF8_ACTCH) AT5G23400 Solyc04g008840.3 777 1072 1034 1209 1165 1127 1160 958 950 855 938 906 1262 1178 1242 FRIGIDA-like protein (AHRD V3.3 *** A0A2G2X9B2_CAPBA) Solyc04g008850.1 314 2191 1462 1809 3094 2835 2729 2817 2734 1331 1978 2030 2098 2057 1669 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** Q9C6M0_ARATH) AT3G20015 Solyc04g008860.4 561 735 586 578 641 638 775 760 566 476 531 543 788 738 556 Protein arginine N-methyltransferase (AHRD V3.3 *** A0A2U1N672_ARTAN) AT3G20020 Solyc04g008870.3 90 157 160 192 96 161 154 155 136 69 71 119 137 171 112 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G2X9C5_CAPBA) AT5G08520 Solyc04g008880.4 100 146 145 180 251 280 253 240 168 140 138 223 136 182 148 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (AHRD V3.3 *** A0A318T9G3_9RHIZ) Solyc04g008890.3 299 434 394 408 410 378 454 400 312 279 304 364 519 457 317 Splicing factor subunit (AHRD V3.3 *** V4M5F2_EUTSA) AT4G14342 Solyc04g008900.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein, putative (DUF247) (AHRD V3.3 *** Q9SN03_ARATH) Solyc04g008910.3 17 10 17 22 17 12 12 5 18 12 28 6 22 30 25 UPF0481 protein At3g47200-like (AHRD V3.3 *-* A0A2I4HQD7_9ROSI) AT3G60470 Solyc04g008920.1 0 3 0 0 0 4 0 0 1 0 0 0 3 1 0 UPF0481 protein At3g47200-like (AHRD V3.3 *-* A0A2I4EN24_9ROSI) Solyc04g008930.2 2 10 16 3 33 14 14 7 6 7 3 2 12 22 26 GRAM domain (AHRD V3.3 *** A0A200Q501_9MAGN) AT5G23370 Solyc04g008940.4 86 34 24 36 24 12 22 20 18 32 18 16 20 50 26 GRAM domain-containing protein (AHRD V3.3 *** A0A1Q3B313_CEPFO) AT5G23370 Solyc04g008950.4 12 36 34 10 38 32 26 32 20 5 18 10 29 38 68 GRAM domain-containing protein (AHRD V3.3 *** A0A1Q3B313_CEPFO) AT5G23370 Solyc04g008960.3 13 47 51 63 103 88 87 47 42 22 53 20 55 62 69 GEM-like protein 6 (AHRD V3.3 *** A0A2G2X9D6_CAPBA) AT5G23370 Solyc04g008970.3 9 27 38 40 36 33 63 46 30 18 9 14 41 20 26 GEM-like protein 6 (AHRD V3.3 *** A0A2G3CEM1_CAPCH) AT5G23370 Solyc04g008980.3 1074 471 457 556 444 495 524 405 384 594 513 432 339 517 677 F-box/LRR-repeat protein 4 (AHRD V3.3 *** A0A1J3F2P7_NOCCA) AT5G23340 Solyc04g008990.3 164 207 211 223 269 254 267 171 225 160 311 186 223 236 176 FAD synthetase 2, chloroplastic (AHRD V3.3 *** A0A2G2X9G0_CAPBA) AT5G23330 Solyc04g009000.1 54 75 91 65 17 17 31 36 45 37 37 33 65 116 115 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2ZGM3_CAPAN) AT2G13600 Solyc04g009010.2 239 155 185 261 277 311 267 195 194 223 292 191 178 191 202 Protein-S-isoprenylcysteine O-methyltransferase (AHRD V3.3 *** A0A2G2ZGM0_CAPAN) AT5G08335 Solyc04g009020.4 463 620 308 415 1326 1375 1367 1449 580 670 476 592 361 385 436 High chlorophyll fluorescent 107 (AHRD V3.3 *** F4J3Z3_ARATH) AT3G17040 Solyc04g009030.3 2671 5660 3898 4075 8050 6958 7193 8675 6697 6062 3873 5181 3314 3008 4588 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A0A8IBT8_NICBE) AT1G12900 Solyc04g009040.4 148 197 190 165 85 126 78 58 124 198 139 74 186 103 73 Receptor-kinase, putative (AHRD V3.3 *** B9SZK5_RICCO) Solyc04g009050.4 2747 1453 538 1435 1482 1717 1784 1590 962 1463 565 897 1034 884 811 agglutinin-like protein (AHRD V3.3 *-* AT3G54500.7) AT5G64170 Solyc04g009060.4 1258 851 772 673 755 809 848 774 854 720 509 770 942 800 758 CD2 antigen cytoplasmic tail-binding protein (AHRD V3.3 *** A0A2K3N4E5_TRIPR) AT5G09390 Solyc04g009070.1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 Disease resistance protein RPP13 (AHRD V3.3 *-* A0A1J3HH64_NOCCA) Solyc04g009080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200PUC6_9MAGN) Solyc04g009090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein RPP13 (AHRD V3.3 *** A0A2G3CF32_CAPCH) Solyc04g009100.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein RPP13 (AHRD V3.3 *-* A0A2G2X9C3_CAPBA) Solyc04g009110.1 19 13 5 7 16 15 17 4 6 13 19 5 14 24 21 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g009120.3 5 8 27 12 0 6 4 0 3 3 15 12 1 6 37 Disease resistance protein (AHRD V3.3 *-* A0A200PUC6_9MAGN) Solyc04g009130.4 5 15 2 1 26 48 46 52 13 6 4 2 3 2 0 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g009140.4 546 572 579 525 577 547 543 493 460 464 456 613 570 604 572 Ribosomal protein L46 (AHRD V3.3 *** A0A200QTK4_9MAGN) AT1G14620 Solyc04g009150.1 12 37 4 15 9 22 11 15 22 7 36 1 17 19 18 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g009160.4 267 209 206 215 183 181 177 145 212 210 262 171 211 233 189 transcriptional regulator ATRX homolog isoform X2 (AHRD V3.3 *-* XP_026387379.1) Solyc04g009170.3 421 487 410 422 428 435 377 524 394 527 338 545 303 411 186 RING/U-box superfamily protein (AHRD V3.3 *** A0A1I9LQQ9_ARATH) AT3G19950 Solyc04g009180.3 1320 1436 961 935 1541 1807 1908 1647 1234 963 1346 1122 1122 919 638 TCP transcription factor 14 AT5G23280 Solyc04g009190.3 184 147 206 187 148 188 175 141 144 157 215 138 280 218 216 UPF0664 stress-induced protein C29B12.11c (AHRD V3.3 *** A0A1J3EGS3_NOCCA) Solyc04g009200.3 1038 2781 1930 1761 3098 2483 2724 3061 2272 1663 1503 2033 1872 1927 1616 glutamate 1-semialdehyde 2,1-aminomutase AT5G63570 Solyc04g009210.1 64 66 42 43 73 61 61 85 69 71 33 79 51 95 52 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2X9F5_CAPBA) AT5G08305 Solyc04g009215.1 15 11 22 9 10 18 15 14 5 13 16 10 10 6 24 Unknown protein Solyc04g009220.2 84 77 61 99 55 70 88 74 86 69 45 74 48 112 113 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QIY5_9MAGN) AT5G08310 Solyc04g009230.4 247 263 257 204 191 175 155 119 170 208 263 179 319 245 202 Thioredoxin-like protein 4A (AHRD V3.3 *** A0A1U8FZJ9_CAPAN) Solyc04g009240.2 15 30 40 53 26 27 31 17 35 25 87 25 33 41 52 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g009250.1 10 15 1 27 2 19 9 12 9 5 15 5 2 11 18 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g009260.3 44 95 142 103 127 113 130 150 146 65 207 141 70 94 208 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g009280.1 18 5 2 12 0 2 22 5 13 5 1 1 10 6 20 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic (AHRD V3.3 *-* A0A2I4ECT2_9ROSI) Solyc04g009290.1 31 11 22 5 5 5 6 1 17 7 8 17 4 15 12 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g009300.4 569 479 537 342 452 486 515 384 486 393 481 385 522 540 507 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic (AHRD V3.3 *** A0A2I4ECT2_9ROSI) AT3G57180 Solyc04g009305.1 19 31 54 3 3 4 5 5 3 8 34 3 29 11 8 transmembrane protein (AHRD V3.3 *-* AT5G08240.1) AT5G08240 Solyc04g009310.4 204 412 351 337 412 326 285 380 356 242 180 260 406 424 235 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A2G2X9Z7_CAPBA) AT5G23140 Solyc04g009320.3 164 298 208 265 387 343 330 254 281 171 201 300 412 350 267 hsp70 nucleotide exchange factor FES1 (AHRD V3.3 *** A0A2I4FCD8_9ROSI) AT3G51980 Solyc04g009330.4 100 285 220 193 283 296 263 228 184 124 150 252 253 324 165 Serine/threonine-protein kinase Aurora-3 (AHRD V3.3 *** A0A2G2ZF68_CAPAN) AT2G45490 Solyc04g009340.3 1118 1186 1149 1449 1343 1317 1385 1647 1267 1864 979 1474 1172 1329 1069 RING/U-box superfamily protein (AHRD V3.3 *** Q8GWB1_ARATH) AT3G19895 Solyc04g009350.3 458 809 502 501 742 635 656 862 714 635 360 717 712 522 431 Histidinol-phosphate aminotransferase (AHRD V3.3 *** B6TRS1_MAIZE) AT1G71920 Solyc04g009360.3 351 212 259 311 329 304 223 252 318 337 299 335 286 232 272 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1KCL2_ARTAN) AT5G54520 Solyc04g009370.4 313 343 269 266 318 338 296 250 245 249 242 152 256 239 245 hypothetical protein (AHRD V3.3 *** AT3G19900.1) AT3G19900 Solyc04g009380.3 1055 580 671 705 340 376 395 255 300 471 644 381 523 533 657 S-acyltransferase (AHRD V3.3 *** A0A2G3CEE4_CAPCH) AT3G18620 Solyc04g009390.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* B3H578_ARATH) AT1G43770 Solyc04g009400.4 39 78 92 75 59 62 72 87 43 42 43 69 38 74 13 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* B3H578_ARATH) AT1G43770 Solyc04g009410.3 2056 2341 2420 2151 2615 2483 2216 2643 2055 2395 1717 2182 2901 2437 1878 Proteasome subunit beta (AHRD V3.3 *** A0A2G2ZG08_CAPAN) AT1G21720 Solyc04g009420.3 111 278 106 175 204 337 256 244 192 149 142 192 202 183 162 PsbP domain-containing protein (AHRD V3.3 *** A0A1Q3CAL9_CEPFO) AT2G28605 Solyc04g009430.3 114 189 142 177 193 230 229 213 215 151 152 194 208 138 156 NAD-dependent protein deacylase (AHRD V3.3 *** A0A1U8GM55_CAPAN) AT5G09230 Solyc04g009440.3 641 703 1422 187 95 102 82 114 368 1559 1798 237 1708 475 565 NAC domain protein AY498713 Solyc04g009450.1 55 112 61 69 83 84 98 87 88 40 121 64 104 114 111 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3CEN0_CAPCH) Solyc04g009453.1 186 74 79 80 71 56 60 41 50 80 30 62 41 46 90 Mediator of RNA polymerase II transcription subunit 15a (AHRD V3.3 *-* A0A2G2ZG46_CAPAN) Solyc04g009457.1 80 37 48 24 6 13 31 4 35 21 20 31 28 22 36 Unknown protein Solyc04g009470.4 249 111 123 121 50 87 73 51 61 110 125 117 110 144 170 Unknown protein Solyc04g009480.1 27 19 6 31 25 24 22 18 16 34 20 18 18 25 57 mediator of RNA polymerase II transcription subunit 15a isoform X2 (AHRD V3.3 --* XP_004236822.1) Solyc04g009490.1 0 1 1 5 0 0 0 0 0 0 0 0 0 0 8 Mediator of RNA polymerase II transcription subunit 15a (AHRD V3.3 *-* A0A2G2ZG46_CAPAN) Solyc04g009500.4 1068 1229 1180 1192 1363 1530 1526 1492 1286 1143 1168 1209 1355 1415 960 Mediator of RNA polymerase II transcription subunit 15a (AHRD V3.3 *-* A0A2G2X9T9_CAPBA) Solyc04g009510.4 2198 1793 1819 1835 2104 2223 2424 2113 1809 1970 2241 2009 1402 1642 2409 RNA binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* Q9M1E4_ARATH) Solyc04g009520.3 129 79 42 75 119 108 99 126 55 101 49 112 76 80 24 Nuclear transcription factor Y subunit B (AHRD V3.3 *-* A0A2G2X323_CAPBA) Solyc04g009525.1 0 0 0 2 10 6 2 2 1 1 3 0 6 6 0 Unknown protein Solyc04g009530.4 500 560 646 722 681 644 742 692 608 645 602 627 502 609 559 Glutathione S-transferase (AHRD V3.3 *** A0A200QHH9_9MAGN) Solyc04g009540.1 280 647 543 519 774 559 629 805 552 442 410 596 420 543 372 50S ribosomal protein L10 (AHRD V3.3 *** B6SUJ0_MAIZE) AT5G13510 Solyc04g009550.3 287 479 470 418 634 470 519 586 457 417 375 433 498 440 400 Protein TONNEAU 1b (AHRD V3.3 *** A0A1U8GVY3_CAPAN) AT3G55000 Solyc04g009560.3 696 1113 1330 1377 1671 1567 1599 1437 1423 1070 1318 1007 1121 1108 1214 Rab-GTPase-TBC domain (AHRD V3.3 *** A0A200R6A4_9MAGN) AT3G55020 Solyc04g009570.3 460 515 695 508 520 572 601 408 403 528 517 459 600 541 492 hypothetical protein (AHRD V3.3 *** AT5G14105.1) AT5G14105 Solyc04g009580.3 845 1059 1445 1291 1219 1508 1481 1111 1087 976 1214 1058 1057 1020 1273 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (AHRD V3.3 *** B6SU69_MAIZE) AT2G39290 Solyc04g009590.4 0 0 5 1 0 0 0 0 0 0 0 0 1 1 0 Unknown protein Solyc04g009600.3 100 197 108 116 127 163 183 149 133 76 121 125 139 203 116 TRAF-like superfamily protein (AHRD V3.3 *** AT3G11950.5) AT3G11950 Solyc04g009610.2 27 49 37 36 45 55 40 52 35 37 52 39 41 24 33 Fasciclin domain-containing protein (AHRD V3.3 *-* A0A1Q3AM65_CEPFO) Solyc04g009620.4 588 369 422 513 284 275 320 233 300 254 426 243 401 422 782 chorismate synthase 2 precursor AT1G48850 Solyc04g009630.3 1049 1023 1009 744 492 552 567 551 1310 1403 1098 773 1500 1112 954 Alpha-glucosidase (AHRD V3.3 *** A0A2G2X9Q1_CAPBA) AT5G11720 Solyc04g009650.4 990 1459 997 1196 1369 1243 1542 1421 1258 1080 917 1356 1485 1458 1300 Diphosphomevalonate decarboxylase (AHRD V3.3 *** A0A2G3B119_CAPCH) AT3G54250 Solyc04g009660.2 5 15 13 24 18 9 14 2 14 3 10 4 14 31 52 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g009670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acyltransferase-like protein (AHRD V3.3 *-* Q589X8_TOBAC) Solyc04g009680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acyltransferase-like protein (AHRD V3.3 *-* Q589X7_TOBAC) Solyc04g009690.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g009700.3 81 147 180 136 188 126 137 139 147 115 96 104 176 144 205 Dual specificity phosphatase (AHRD V3.3 *** A0A200Q6D2_9MAGN) Solyc04g009710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ferredoxin (AHRD V3.3 *** K4BPC6_SOLLC) AT2G27510 Solyc04g009720.1 167 127 90 403 177 128 184 216 133 324 90 199 93 155 85 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2I0WCG1_9ASPA) Solyc04g009730.4 281 230 225 240 266 265 320 204 262 179 199 235 195 374 335 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WCG1_9ASPA) Solyc04g009740.4 2715 1446 1395 1329 913 1105 990 1139 1510 2122 1252 1402 1120 1175 1843 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A2G3CEA8_CAPCH) AT5G03540 Solyc04g009760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MQ33_TRIPR) AT5G22070 Solyc04g009770.3 19969 11737 10659 9122 7822 7675 7534 6606 8053 7494 8138 7212 12019 9467 10884 DnaJ protein (AHRD V3.3 *** Q43177_SOLTU) AT3G44110 Solyc04g009780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1MY73_ARTAN) Solyc04g009790.4 270 141 158 225 202 235 224 201 234 192 211 186 158 120 139 Protein DETOXIFICATION (AHRD V3.3 *-* A0A0K9R7X2_SPIOL) Solyc04g009800.3 996 812 1029 764 885 890 848 849 1103 785 838 784 896 906 857 Calcium dependent protein kinase (AHRD V3.3 *** E1CFU1_SOLLC) AT5G04870 Solyc04g009810.3 245 264 139 224 137 171 134 206 210 183 129 195 338 193 216 Protein pelota homolog (AHRD V3.3 *** R4NBR3_SOLPE) AT4G27650 Solyc04g009820.3 1506 1987 1986 1574 3760 3320 3159 4539 1399 1534 1800 2968 1742 1710 803 GRF1-interacting factor 1 (AHRD V3.3 *-* A0A2G2ZG76_CAPAN) AT5G28640 Solyc04g009830.3 259 214 204 192 198 200 195 185 256 192 213 183 400 261 323 SWR1 complex subunit 2 (AHRD V3.3 *** A0A2G3CE84_CAPCH) AT2G36740 Solyc04g009840.4 127 196 193 226 236 226 217 220 201 172 228 171 201 243 173 Unknown protein Solyc04g009850.4 117 90 64 81 13 6 6 12 33 45 96 26 95 52 50 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) Solyc04g009860.4 827 467 459 370 20 32 28 53 405 1084 542 292 1217 541 384 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QA13_ARTAN) Solyc04g009870.1 20 38 50 25 8 13 5 2 2 65 31 0 81 25 5 Unknown protein Solyc04g009880.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc04g009900.4 3763 2389 1279 2467 845 913 781 857 1274 1593 1144 1253 4121 2441 1746 phosphoenolpyruvate carboxylase kinase AT3G04530 Solyc04g009910.3 1734 881 578 918 930 920 754 808 345 676 551 518 1264 1134 1871 Phosphoenolpyruvate carboxylase kinase (AHRD V3.3 *** Q9SDY0_SOLLC) AT3G04530 Solyc04g009920.3 607 488 345 451 410 382 396 523 375 547 346 473 483 412 306 Hexosyltransferase (AHRD V3.3 *** A0A2G3CE89_CAPCH) AT5G18480 Solyc04g009930.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 Cytochrome P450 (AHRD V3.3 *** A0A200QUP8_9MAGN) Solyc04g009940.4 189 296 347 291 331 391 359 311 294 185 306 272 372 417 353 Chloroplast J-like domain 1 (AHRD V3.3 *** A0A2U1N5K8_ARTAN) AT1G08640 Solyc04g009950.3 3652 3961 2775 2244 2988 2967 2766 3453 3960 2879 2550 3141 3620 3337 2593 cell division cycle 5 AT1G09770 Solyc04g009960.3 915 728 432 499 1203 976 1068 1180 764 830 426 543 471 531 704 Threonine aldolase (AHRD V3.3 *** A0A2I0VGR9_9ASPA) AT1G08630 Solyc04g009970.4 709 681 586 640 422 575 649 463 495 475 592 491 597 631 809 Zinc finger protein (AHRD V3.3 *** A0A200QE12_9MAGN) AT1G60560 Solyc04g009980.4 95 27 72 91 0 3 6 2 44 65 161 20 24 30 10 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A2G3CE82_CAPCH) Solyc04g009990.3 1460 1113 1027 1269 741 1020 998 797 1257 938 1164 873 989 1120 1245 Transcription factor jumonji (Jmj) family protein / zinc finger (C5HC2 type) family protein (AHRD V3.3 *** A0A1P8AMS3_ARATH) AT1G08620 Solyc04g010000.3 1008 710 524 615 559 460 376 618 474 708 559 695 763 631 642 RNA-binding protein 42 (AHRD V3.3 *** A0A2I4E3H6_9ROSI) AT3G04500 Solyc04g010010.3 20 14 2 13 0 12 2 9 6 8 12 10 7 11 23 PITH domain-containing protein (AHRD V3.3 *-* A0A1U8E514_CAPAN) Solyc04g010030.1 11 1 3 2 7 4 3 0 1 5 6 1 1 6 7 PITH domain-containing protein (AHRD V3.3 *-* A0A1U8E514_CAPAN) Solyc04g010040.3 79 136 96 84 319 266 283 366 118 124 74 122 162 104 102 RNA-binding protein 42 (AHRD V3.3 *** A0A1J3JWW6_NOCCA) AT3G04500 Solyc04g010045.1 28 25 21 26 20 21 11 16 13 18 18 9 32 35 15 Unknown protein Solyc04g010050.4 283 290 216 211 162 203 205 144 183 100 158 144 375 330 268 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PVZ1_9MAGN) AT1G08610 Solyc04g010060.2 63 39 38 35 49 61 37 53 44 51 57 41 32 20 64 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200PW01_9MAGN) Solyc04g010070.4 1707 2094 1637 1584 1977 2098 1975 2134 1812 1564 1249 1643 1896 1778 1288 Serine/threonine protein phosphatase 2A regulatory subunit B subunit alpha-like protein (AHRD V3.3 *** A0A2K3NUG4_TRIPR) AT5G28850 Solyc04g010080.3 949 667 652 631 607 472 511 651 516 720 475 652 607 637 481 Diphthine--ammonia ligase (AHRD V3.3 *** A0A2G2X9R3_CAPBA) AT3G04480 Solyc04g010090.3 1499 1382 1301 1329 1358 1232 1305 958 1200 1254 1338 1224 1343 1287 1328 Transcription initiation factor TFIID subunit 9 (AHRD V3.3 *** A0A1U8GVQ5_CAPAN) AT1G54140 Solyc04g010100.2 449 405 596 555 606 664 620 503 380 315 554 414 464 517 523 50S ribosomal protein L33 (AHRD V3.3 *** J7FNN0_OLEEU) AT5G18790 Solyc04g010110.3 534 556 469 523 562 574 472 580 442 493 316 545 555 600 456 Glycosyltransferase (AHRD V3.3 *** V4NB36_EUTSA) AT5G54060 Solyc04g010120.3 1794 1360 1371 1278 1748 1552 1456 1531 1323 1557 1440 1511 1405 1398 1428 macrophage erythroblast attacher (AHRD V3.3 *** A0A2I4H326_9ROSI) AT3G55070 Solyc04g010130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 --* AT5G13590.4) Solyc04g010140.1 95 67 59 62 63 59 86 44 44 33 110 38 69 48 105 Unknown protein Solyc04g010150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g010160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g010155.2 7 15 0 2 7 8 0 0 0 12 6 3 29 14 5 hypothetical protein (AHRD V3.3 *-* AT5G13590.4) Solyc04g010180.4 156 168 79 107 144 117 156 161 165 167 57 114 42 145 90 LOW QUALITY PROTEIN: uncharacterized protein LOC110670528 (AHRD V3.3 --* XP_021688301.1) Solyc04g010185.1 1696 1236 1455 1285 1167 1423 1447 1251 1420 1378 1384 1113 1131 1470 1800 hypothetical protein (AHRD V3.3 *-* AT5G13590.4) AT5G13590 Solyc04g010190.1 787 783 341 641 1247 911 939 1121 653 935 474 645 620 471 400 FKBP-type peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** AT3G12345.1) AT3G12345 Solyc04g010200.1 38 107 95 104 97 111 63 85 168 124 112 163 66 89 77 ABC transporter G family member (AHRD V3.3 *** A0A2K3PJ14_TRIPR) AT2G39350 Solyc04g010210.1 0 1 0 0 0 0 0 1 0 0 0 3 0 0 0 ABC transporter G family member (AHRD V3.3 *** A0A2K3PJ14_TRIPR) Solyc04g010220.3 1829 1575 1750 1636 1649 1761 1782 1953 1986 1566 1838 1860 2218 1865 1830 centrosomal protein of 135 kDa-like protein (AHRD V3.3 *** AT2G37370.3) AT5G13560 Solyc04g010230.4 543 439 526 486 350 447 467 334 370 478 610 443 447 393 594 Pectate lyase (AHRD V3.3 *** A0A2G2X9W3_CAPBA) AT3G55140 Solyc04g010240.3 1072 2667 2662 2026 2734 2625 2753 2533 1620 1345 2167 1899 3085 2605 2391 60S ribosomal protein L35 (AHRD V3.3 *** A0A2G2ZKJ8_CAPAN) AT2G39390 Solyc04g010250.3 393 189 543 372 153 216 194 129 362 283 1099 274 234 437 2283 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q8RXN7_ARATH) AT2G39420 Solyc04g010260.3 2571 3011 2462 2329 2790 2842 2870 2976 2604 2485 2449 2866 2850 2972 2538 Splicing factor 3B subunit 3 (AHRD V3.3 *** A0A2G3CE29_CAPCH) AT3G55220 Solyc04g010270.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Dirigent protein (AHRD V3.3 *** K4BPI1_SOLLC) AT2G39430 Solyc04g010280.2 84 31 42 32 34 18 8 19 22 22 12 24 36 50 41 Unknown protein Solyc04g010285.1 29 36 6 42 26 17 17 11 30 36 47 12 18 14 55 Plant protein 1589 of Uncharacterized protein function (AHRD V3.3 *** A0A061FM19_THECC) AT3G55240 Solyc04g010290.4 447 502 442 501 720 843 889 630 486 490 381 492 607 508 374 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) Solyc04g010300.4 31 48 45 48 42 46 38 58 53 40 19 52 36 37 35 ABC transporter B family member 20 (AHRD V3.3 *-* A0A2G2ZFT7_CAPAN) Solyc04g010310.4 1435 1220 1192 1226 936 1073 1094 1109 1149 1274 1238 1052 1056 1124 1130 ABC transporter B family member 20 (AHRD V3.3 *** A0A2G2X9W7_CAPBA) Solyc04g010320.1 4 24 13 12 16 41 32 25 60 27 7 41 45 64 14 Cytochrome P450 (AHRD V3.3 *** A0A200R6R8_9MAGN) Solyc04g010330.3 19 97 112 63 219 165 135 157 87 44 143 83 91 132 101 Auxin-regulated protein Solyc04g150106.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g150107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g011330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g011333.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g011335.1 0 3 0 0 0 0 0 0 0 0 0 0 1 1 0 Unknown protein Solyc04g011337.1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g011340.3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 WAT1-related protein (AHRD V3.3 *** K4BPI9_SOLLC) Solyc04g011350.3 313 806 854 816 721 787 791 937 921 636 785 658 747 721 711 2-oxoglutarate dehydrogenase, E1 component (AHRD V3.3 *** F4IWV2_ARATH) AT3G55410 Solyc04g011360.3 995 1221 1451 1496 1633 1837 1608 1855 1511 1443 1474 1514 1570 1517 1338 GTP-binding protein Solyc04g011370.4 457 747 737 721 736 729 640 743 707 625 594 623 876 784 617 Unknown protein Solyc04g011380.4 2572 2103 2563 2705 2274 2644 3113 2052 2079 1846 2393 2056 1630 2357 3201 Zinc finger C3H1 domain protein (AHRD V3.3 *** A0A1P8B0L2_ARATH) AT2G39580 Solyc04g011390.1 197 2033 2074 1692 2834 3048 1998 3036 1416 1133 1534 2697 617 1888 688 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc04g011400.3 1052 2256 2039 1774 2399 2197 2300 2592 2717 1852 1480 2257 2204 2190 1823 UDP-glucuronic acid decarboxylase (AHRD V3.3 *** G5DXR5_SILLA) Solyc04g011420.4 331 268 398 329 234 186 221 176 228 258 373 282 305 278 565 CASP-like protein (AHRD V3.3 *** A0A2G3CIG5_CAPCH) AT3G55390 Solyc04g011430.3 9742 4957 2991 3582 1907 2257 2120 1432 1837 2635 3103 2343 2866 2804 3350 Ubiquitin conjugating enzyme (AHRD V3.3 *** A0A172MJZ4_PAESU) Solyc04g011440.4 4896 1392 963 529 50 57 60 43 640 385 402 365 1214 741 555 ethylene-responsive heat shock protein cognate 70 Solyc04g011450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heat shock cognate 70 kDa protein (AHRD V3.3 *-* A0A2G3CE27_CAPCH) Solyc04g011460.3 2613 1988 2830 2406 2094 2588 2603 1901 2247 2155 3071 1651 2175 2553 2745 FYD (AHRD V3.3 *** AT3G12570.4) Solyc04g011463.1 52 53 47 47 39 78 25 51 35 50 25 65 39 61 34 Unknown protein Solyc04g011467.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CASP-like protein (AHRD V3.3 *** A0A2G2XA87_CAPBA) Solyc04g011480.3 1 1 0 0 0 0 0 0 0 0 0 9 0 0 0 CASP-like protein (AHRD V3.3 *** A0A2G2ZG68_CAPAN) AT2G39530 Solyc04g011490.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CASP-like protein (AHRD V3.3 *** A0A2G2XA87_CAPBA) AT2G39530 Solyc04g150108.1 87 93 78 82 91 88 79 82 80 92 73 76 127 68 116 Unknown protein AT4G26055 Solyc04g011500.3 1679 2504 2681 2545 3203 2732 3060 3118 2608 2324 2067 2835 1968 2015 2660 Actin (AHRD V3.3 *** A0A1U8GLU9_CAPAN) AT3G12110 Solyc04g011510.4 2360 5429 4697 5316 7412 6544 7061 7094 5697 5078 4178 4389 5738 4604 4124 Triosephosphate isomerase (AHRD V3.3 *** S8E0E9_9LAMI) Solyc04g011520.3 851 500 718 327 136 178 147 141 354 480 570 236 464 472 411 Protein kinase APK1B, chloroplastic (AHRD V3.3 *** A0A2G2ZG75_CAPAN) Solyc04g011530.3 238 304 297 248 225 203 205 167 220 245 314 213 276 299 433 Cytochrome oxidase complex assembly protein (AHRD V3.3 *** Q9SK63_ARATH) AT2G20390 Solyc04g011540.4 102 108 227 182 275 234 167 235 120 125 98 197 229 144 93 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A8MRW6_ARATH) AT3G55470 Solyc04g011550.2 954 863 1258 1049 1208 969 1022 732 1380 705 1157 788 832 931 1351 pheromone-processing carboxypeptidase KEX1-like (AHRD V3.3 --* XP_022740211.1) Solyc04g011560.4 4154 1621 877 989 828 699 626 852 968 1561 1016 1061 816 1089 1002 Unknown protein Solyc04g011570.3 221 145 171 157 105 154 127 166 156 242 180 119 173 168 212 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NLT0_ARTAN) Solyc04g011580.4 1205 1110 770 1062 1191 1041 1094 1244 1339 1289 734 1126 992 1172 1070 Pumilio-like protein 3 (AHRD V3.3 *** A0A2G2XA68_CAPBA) Solyc04g011590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine histidine transporter 1 (AHRD V3.3 *** A0A2G2ZFY1_CAPAN) Solyc04g011600.4 7 0 0 5 0 0 0 0 0 0 0 0 4 6 11 Glycerol-3-phosphate acyltransferase 5 (AHRD V3.3 *** A0A1U8H0F1_CAPAN) AT3G11430 Solyc04g011610.3 290 212 261 194 143 212 222 219 250 220 247 217 261 249 261 RING/U-box superfamily protein (AHRD V3.3 *** A0A1I9LQQ9_ARATH) AT2G39720 Solyc04g011615.1 187 178 273 295 181 243 267 123 102 133 295 175 173 166 279 Unknown protein Solyc04g011620.3 357 437 560 411 427 450 389 356 442 379 582 344 500 471 632 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G2XA59_CAPBA) AT3G55520 Solyc04g011630.1 229 282 217 260 282 307 287 288 255 194 178 286 215 175 200 Transcription factor GRAS (AHRD V3.3 *-* A0A2U1PJZ1_ARTAN) Solyc04g011640.3 77 135 78 90 89 77 66 106 88 64 22 99 56 79 48 Scarecrow-like protein 14 (AHRD V3.3 *-* A0A2G2V1Y3_CAPBA) Solyc04g011650.3 529 296 668 356 266 302 251 185 379 298 629 371 334 459 618 Telomere binding protein (AHRD V3.3 *** A0JBS3_SOLLC) AT5G13820 Solyc04g011670.3 382 131 137 205 36 81 77 77 149 139 189 42 149 141 318 Transcription factor TGA7 (AHRD V3.3 *** A0A1U8GLI3_CAPAN) AT5G65210 Solyc04g011680.3 0 8 17 1 7 27 21 17 16 2 7 3 0 7 0 Cytochrome (AHRD V3.3 *** A0A1U8GTE9_CAPAN) Solyc04g011690.4 108 155 131 168 19 26 25 23 208 57 98 86 129 81 173 Cytochrome (AHRD V3.3 *** A0A2G3CDZ6_CAPCH) Solyc04g011700.2 425 450 489 493 390 503 505 402 325 346 276 311 397 480 363 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** Q9SD94_ARATH) AT5G64950 Solyc04g011710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g011720.3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A1U8EZB8_CAPAN) Solyc04g011730.3 0 1 0 0 0 0 0 3 0 0 0 1 0 0 0 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A1U8EZB8_CAPAN) Solyc04g011735.1 8 4 11 4 5 1 0 2 2 10 22 4 3 0 0 histone H3.v1 (AHRD V3.3 -** XP_004236724.1) Solyc04g011750.3 4 4 0 0 0 2 0 1 4 0 19 0 0 1 0 histone H3.v1 (AHRD V3.3 *** XP_004236724.1) Solyc04g011760.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g011770.2 7 3 22 6 6 20 8 4 6 13 14 17 6 16 4 Unknown protein Solyc04g011780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Monothiol glutaredoxin-S1 (AHRD V3.3 *** A0A2G3CDZ0_CAPCH) AT1G03020 Solyc04g011790.1 0 0 0 6 0 0 0 0 0 0 0 0 8 14 7 Glutaredoxin (AHRD V3.3 *** A0A1L7MRR3_SOLPI) AT1G03020 Solyc04g011800.1 29 8 14 10 0 0 0 0 1 7 1 1 8 24 28 Glutaredoxin (AHRD V3.3 *** A0A1L7MRR3_SOLPI) AT1G03020 Solyc04g011810.1 24 10 12 10 0 0 0 0 2 4 1 1 11 11 13 Glutaredoxin (AHRD V3.3 *** A0A1L7MRR3_SOLPI) AT1G03020 Solyc04g011820.1 1 0 3 8 0 0 0 0 0 2 0 0 0 2 0 Glutaredoxin (AHRD V3.3 *** A0A1L7MRR3_SOLPI) AT1G03020 Solyc04g011830.1 0 1 7 11 0 0 0 0 0 0 0 0 2 2 0 Glutaredoxin (AHRD V3.3 *** A0A1L7MRR3_SOLPI) AT1G03020 Solyc04g011840.1 0 0 8 0 0 0 0 0 0 0 0 0 0 1 17 Glutaredoxin (AHRD V3.3 *** A0A1L7MRR3_SOLPI) AT1G03020 Solyc04g011850.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Glutaredoxin (AHRD V3.3 *** A0A1L7MRR3_SOLPI) AT1G03020 Solyc04g011860.1 0 3 0 10 0 0 0 0 0 0 0 0 0 4 25 Monothiol glutaredoxin-S1 (AHRD V3.3 *** A0A2G3CDZ0_CAPCH) AT1G03020 Solyc04g011870.1 0 4 2 10 0 0 0 0 0 0 0 0 1 16 23 Glutaredoxin (AHRD V3.3 *** A0A1L7MRR3_SOLPI) AT1G03020 Solyc04g011880.1 43 13 30 126 0 0 2 1 5 8 4 1 50 37 84 Monothiol glutaredoxin-S1 (AHRD V3.3 *** A0A2G3CDX4_CAPCH) AT1G03020 Solyc04g011890.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN) Solyc04g011900.4 199 265 365 418 396 444 437 381 400 314 404 339 257 334 417 Laccase (AHRD V3.3 *-* W1NFT0_AMBTC) AT2G21960 Solyc04g011910.3 0 4 0 6 0 0 6 0 1 2 0 1 0 1 7 sorbin/SH3 domain protein (AHRD V3.3 *** AT5G09960.1) Solyc04g011915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) Solyc04g011920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1QH19_ARTAN) AT4G39490 Solyc04g150109.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A2U1QH19_ARTAN) Solyc04g011940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1MQD4_ARTAN) AT4G39490 Solyc04g011960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1Q201_ARTAN) Solyc04g011965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc04g011980.1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1Q201_ARTAN) Solyc04g011990.3 10 0 2 0 0 0 0 0 0 0 11 0 2 5 0 Disease resistance protein (AHRD V3.3 *** A0A2U1Q201_ARTAN) Solyc04g012000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-coding resistance gene analog (AHRD V3.3 *** B3V7S2_TOBAC) Solyc04g012010.3 64 77 39 38 9 9 7 10 50 56 22 48 44 46 70 Disease resistance protein (AHRD V3.3 *** A0A2U1Q201_ARTAN) Solyc04g012020.1 3 0 0 2 0 0 0 1 1 3 0 0 0 0 2 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc04g012030.3 187 457 667 625 822 986 1097 748 502 491 716 516 364 456 459 S-acyltransferase (AHRD V3.3 *** A0A2G3CDU9_CAPCH) Solyc04g012040.3 597 1175 1250 1292 1417 1375 1561 1233 992 897 1243 1023 1183 1283 1116 26S proteasome non-ATPase regulatory subunit 12-like protein (AHRD V3.3 *** A0A2K3MWS1_TRIPR) AT5G64760 Solyc04g012050.3 28 26 79 5 3 4 2 5 30 16 585 0 13 1 12 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2XAK1_CAPBA) Solyc04g012060.3 356 2777 2356 2392 2691 2532 2732 2878 3002 1510 1597 2852 1571 3363 899 Ribonucleoside-diphosphate reductase (AHRD V3.3 *** A0A1U8FDK5_CAPAN) AT2G21790 Solyc04g012070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WAT1-related protein (AHRD V3.3 *** K4BPQ9_SOLLC) Solyc04g012080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *-* A0A2G3AV45_CAPCH) Solyc04g012110.2 0 0 0 0 0 4 0 0 3 0 0 0 0 0 0 LRR receptor-like serine/threonine-protein kinase EFR (AHRD V3.3 *-* A0A1U8GVB4_CAPAN) Solyc04g012120.3 1346 4276 2788 2987 5096 4464 4685 5667 3967 2650 2426 3557 3890 3359 2527 SIG5 14-3-3 family protein AT1G78300 Solyc04g012140.1 76 15 83 67 0 0 0 0 30 238 221 9 0 78 58 Unknown protein Solyc04g012160.4 237 100 99 141 8 8 22 6 54 127 115 14 43 149 233 SNF1-related kinase AT4G40010 Solyc04g012170.4 1795 1259 1313 1205 1370 1507 1809 1333 1428 1509 1245 1175 1206 1363 1521 Serine/threonine-protein kinase (AHRD V3.3 *** A0A0K0XR11_TOBAC) AT4G29380 Solyc04g012180.4 629 858 865 863 764 850 882 810 719 639 800 564 932 693 722 Ras-related protein Rab11A (AHRD V3.3 *** A0A1U8GVA9_CAPAN) AT5G65270 Solyc04g012185.1 23 31 27 61 12 42 29 31 47 44 32 11 46 38 64 Receptor-like protein kinase (AHRD V3.3 *-* A0A2R6Q6W2_ACTCH) Solyc04g012200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g014210.3 3675 1475 1116 1190 778 878 761 794 1174 1661 1132 1220 1095 1253 1576 RNA helicase DEAH-box12 AT4G01020 Solyc04g014220.1 29 35 44 33 58 96 80 59 36 45 49 47 28 43 22 RING/U-box superfamily protein (AHRD V3.3 *-* F4JJ02_ARATH) Solyc04g014230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein MIZU-KUSSEI 1-like (AHRD V3.3 *** A0A2I4FF71_9ROSI) AT5G65340 Solyc04g014240.1 1670 1224 1189 1401 1240 893 1055 1255 977 1521 1089 1312 1441 1286 1082 Mediator of RNA polymerase II transcription subunit 4 (AHRD V3.3 *** A0A2G3CDH2_CAPCH) AT5G02850 Solyc04g014250.3 813 997 981 876 998 982 956 1101 1043 820 927 945 1116 1109 977 GLABRA2 expression modulator (AHRD V3.3 *** A0A2G3CDH1_CAPCH) AT2G22475 Solyc04g014260.2 844 2527 2608 2240 5513 3916 4014 4681 2803 1668 2247 4672 2191 2144 729 Zinc-finger homeodomain protein 1 (AHRD V3.3 *** A0A2G3CDG4_CAPCH) AT4G24660 Solyc04g013200.1 1 10 5 12 14 7 23 5 12 5 13 10 3 8 11 Unknown protein AT1G26290 Solyc04g014270.3 310 380 327 408 391 339 406 464 419 446 282 342 496 427 240 ATP-dependent 6-phosphofructokinase (AHRD V3.3 *** A0A2G2XA03_CAPBA) AT2G22480 Solyc04g014280.1 0 0 1 0 0 0 0 0 0 0 4 0 15 4 1 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT5G09520.1) Solyc04g014290.1 7 4 8 23 0 1 1 1 10 6 24 11 62 35 60 protein PELPK1-like (AHRD V3.3 *** XP_010319537.1) Solyc04g014300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g014310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g014320.1 5 3 24 32 0 1 1 0 22 14 60 18 76 95 35 protein PELPK2-like (AHRD V3.3 *** XP_010319535.1) Solyc04g014330.1 4 5 10 40 0 1 3 0 3 4 96 25 139 47 60 protein PELPK2-like (AHRD V3.3 *** XP_010319535.1) Solyc04g014340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g014350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g014360.3 113 158 192 161 441 396 294 307 252 123 281 303 154 226 197 bHLH transcription factor 032 Solyc04g014370.4 268 387 246 394 503 533 435 549 395 412 270 492 328 302 334 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (AHRD V3.3 *** A0A2G2V069_CAPBA) AT5G10480 Solyc04g014380.3 0 4 3 0 0 0 0 0 1 0 4 0 1 0 0 Kinase-interacting protein 1 (AHRD V3.3 *** A0A2G2V062_CAPBA) AT2G22560 Solyc04g014390.3 2176 1563 1819 1411 1382 1429 1421 1170 1044 1139 1621 1270 1445 1387 2123 54S ribosomal protein L51, mitochondrial (AHRD V3.3 *** A0A1J3CY67_NOCCA) AT3G59650 Solyc04g014400.4 2294 696 994 996 61 36 37 24 198 305 614 115 1509 1797 1676 LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase GSO1 (AHRD V3.3 *** A0A1U8F7A0_CAPAN) AT1G74170 Solyc04g014410.4 0 0 0 3 0 0 0 0 0 0 0 0 0 0 54 Receptor-like cytosolic serine/threonine-protein kinase RBK1 (AHRD V3.3 *** A0A2G2ZFJ0_CAPAN) Solyc04g014420.4 5 11 29 17 3 23 9 3 4 7 18 4 12 5 34 HVA22-like protein (AHRD V3.3 *** A0A1U8F796_CAPAN) Solyc04g014430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Rhamnogalacturonate lyase family protein (AHRD V3.3 *** A0A2U1PQM1_ARTAN) Solyc04g014450.1 4 9 9 15 18 17 12 7 11 13 16 11 17 8 12 Rhamnogalacturonate lyase family protein (AHRD V3.3 *** A0A2U1PQM1_ARTAN) AT2G22620 Solyc04g014460.4 3480 3130 2387 2950 2873 2533 2755 2842 2635 2713 2293 2666 3102 3096 2659 THO complex subunit 4D (AHRD V3.3 *** A0A2G3CDN8_CAPCH) AT5G37720 Solyc04g014470.3 10 10 0 35 16 34 34 17 19 10 22 18 15 13 53 R2R3MYB transcription factor 20 AT1G66230 Solyc04g014480.3 236 66 77 72 52 70 72 41 63 61 84 57 76 62 62 15.7 kDa heat shock protein, peroxisomal (AHRD V3.3 *** A0A1U8GLK8_CAPAN) AT5G37670 Solyc04g014490.1 1461 2604 1987 2172 3041 2375 2083 3239 2697 2685 1658 2733 3151 2400 1943 B-cell receptor-associated-like protein (AHRD V3.3 *** Q9FFJ0_ARATH) AT5G17190 Solyc04g014500.3 2375 2195 2366 2928 2278 3513 3067 1864 1742 1864 3312 1361 3460 2300 3486 Nudix hydrolase 4 (AHRD V3.3 *** A0A2G2XAD0_CAPBA) Solyc04g014510.3 956 2081 3021 2437 2265 1745 1638 1490 1813 1472 1470 1116 4127 1954 2138 glutamine synthase AT5G37600 Solyc04g014515.1 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g014520.1 4 3 13 7 0 1 3 2 0 3 0 9 1 6 0 transmembrane protein 45B-like (AHRD V3.3 *** A0A2I4DQK0_9ROSI) AT1G55230 Solyc04g014530.1 939 379 463 615 32 29 33 7 299 623 377 194 543 353 1270 Ethylene Response Factor C.2 Solyc04g014540.3 185 208 148 251 186 165 215 123 111 103 71 98 251 228 305 Zinc finger protein 3 (AHRD V3.3 *** A0A2G2XAC6_CAPBA) Solyc04g014550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 TPX2 (Targeting protein for Xklp2) protein family (AHRD V3.3 *** F4K773_ARATH) AT5G37478 Solyc04g014560.4 3230 2010 1389 1398 1032 1122 1088 1158 1604 1706 1449 1537 1788 1919 1762 Pre-mRNA-splicing factor (AHRD V3.3 *-* G5DX06_SILLA) AT5G37370 Solyc04g014570.3 1335 3185 2425 2888 3104 3595 3289 3287 2828 2719 2489 2530 2831 2534 2384 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G3CDP8_CAPCH) AT1G14670 Solyc04g014578.2 11 9 7 0 1 5 2 0 5 3 6 3 5 17 10 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3D6E9_CAPCH) Solyc04g014600.3 186 87 55 83 90 130 103 58 41 25 23 16 85 60 49 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A2U1NYH2_ARTAN) AT3G03270 Solyc04g014610.4 114 119 146 118 148 182 131 128 73 82 93 81 101 107 151 Armadillo repeat-containing protein 7-like (AHRD V3.3 *** A0A2K3L4G0_TRIPR) AT5G37290 Solyc04g014613.1 13 19 5 32 89 24 52 45 27 15 10 33 2 16 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc04g014617.1 13 35 10 15 36 19 28 25 31 11 36 38 0 14 2 Pleiotropic drug resistance protein 1 (AHRD V3.3 *-* A0A2G3CHS9_CAPCH) Solyc04g014640.2 1 17 5 12 43 32 48 35 6 1 0 3 4 11 3 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc04g014645.1 114 180 165 143 305 265 263 245 61 95 48 67 187 282 98 LRR receptor-like serine/threonine-protein kinase EFR (AHRD V3.3 *-* A0A1U8GVB4_CAPAN) Solyc04g014670.3 810 911 888 896 835 868 871 671 685 764 830 682 1058 893 1027 Short-chain dehydrogenase/reductase SDR (AHRD V3.3 *** A0A200PSC0_9MAGN),Pfam:PF13561 AT4G05530 Solyc04g014680.4 939 935 978 863 1017 1005 989 1161 1227 1268 1042 1044 870 816 1059 Ubiquitin-specific protease family C19 protein (AHRD V3.3 *-* A0A2K3NKS0_TRIPR) Solyc04g014690.3 8 7 10 11 0 7 3 2 8 9 15 5 2 8 6 MAP kinase kinase kinase 32 AT1G62400 Solyc04g014700.4 447 285 225 164 194 299 261 237 215 238 278 194 280 328 342 Mediator of RNA polymerase II transcription subunit 11 (AHRD V3.3 *** A0A1U8GL63_CAPAN) AT3G01435 Solyc04g014710.3 637 896 1254 928 1183 1061 1045 1114 1191 706 1179 986 1057 1054 978 golgin family A protein (AHRD V3.3 *** AT4G22320.1) AT4G22320 Solyc04g014720.4 3766 6667 5748 5299 5698 7830 7126 5976 4668 3653 4949 4809 8356 7451 5861 60S ribosomal protein L6 (AHRD V3.3 *** A0A2G3B009_CAPCH) AT1G18540 Solyc04g014730.4 417 518 509 626 1059 898 871 1099 1215 1086 722 1137 551 660 654 Fumarylacetoacetase (AHRD V3.3 *** A0A1U8GL68_CAPAN) Solyc04g014740.3 116 56 83 131 86 102 108 137 106 91 168 84 97 100 145 BAG family molecular chaperone regulator 5, mitochondrial (AHRD V3.3 *** A0A2G3CDN3_CAPCH) AT1G12060 Solyc04g014750.1 39 41 77 63 95 87 65 42 38 50 55 80 14 52 36 transmembrane protein (AHRD V3.3 *** AT1G12064.1) AT1G12064 Solyc04g014760.3 362 519 547 650 580 613 528 589 621 353 457 518 488 575 495 Rho GDP-dissociation inhibitor 1 (AHRD V3.3 *** A0A2G2XAA8_CAPBA) AT3G07880 Solyc04g014770.1 1 4 0 4 6 7 0 0 1 6 3 0 0 12 0 Unknown protein Solyc04g014780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine proteinase inhibitor (AHRD V3.3 *** A0A2G3CDP4_CAPCH) AT5G47550 Solyc04g014790.1 7 34 22 39 36 27 23 39 31 9 29 28 25 29 9 Cysteine proteinase inhibitor (AHRD V3.3 *** A0A2G3CDP4_CAPCH) AT5G47550 Solyc04g014800.3 20 8 33 50 8 27 25 29 21 21 11 26 16 31 36 myo-inositol monophosphatase 1 AT3G02870 Solyc04g014810.3 1176 2008 1095 1643 1769 1659 1248 1594 1634 1507 878 1356 2184 1537 1328 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2I0XD88_9ASPA) AT4G16490 Solyc04g014820.4 164 199 157 143 96 175 154 114 157 136 160 95 157 207 189 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4JFN7_ARATH) Solyc04g014830.3 1756 802 509 326 154 174 201 112 253 301 348 192 789 607 458 Transcription factor GRAS (AHRD V3.3 *** A0A200QXB8_9MAGN) AT4G17230 Solyc04g014835.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 Unknown protein Solyc04g014840.3 4 2 1 0 1 1 1 0 3 3 1 0 15 1 4 Endoplasmic reticulum, stress-associated Ramp4 (AHRD V3.3 *** A0A2U1N8N8_ARTAN) Solyc04g014850.3 75 354 278 496 600 565 499 809 253 329 299 464 102 261 144 structural maintenance of chromosomes protein (AHRD V3.3 *-* AT4G17240.1) AT4G17240 Solyc04g014853.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3CPS6_CEPFO) Solyc04g014855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb/SANT-like domain-containing protein (AHRD V3.3 *-* A0A2U1LQK4_ARTAN) Solyc04g150110.1 0 0 0 14 2 0 0 0 4 3 0 0 4 1 48 Unknown protein Solyc04g014870.3 819 754 894 969 604 743 650 618 708 647 716 643 580 681 842 RNA-dependent RNA polymerase6a AT3G49500 Solyc04g014880.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two pore potassium channel a (AHRD V3.3 *** A0A2G3CDM4_CAPCH) Solyc04g014883.1 324 154 334 125 55 48 57 37 104 233 138 86 286 151 181 LRR receptor-like serine/threonine-protein kinase EFR (AHRD V3.3 *-* A0A1U8GVB4_CAPAN) Solyc04g014887.1 883 391 659 615 289 519 487 286 427 369 735 289 487 415 807 Receptor-like protein kinase (AHRD V3.3 *-* A0A2R6Q6W2_ACTCH) Solyc04g014920.3 7 3 0 6 7 6 10 13 5 5 10 5 1 12 7 Unknown protein Solyc04g014930.3 16 4 2 16 7 7 13 13 19 8 0 4 8 10 8 Unknown protein Solyc04g014940.2 95 62 49 52 54 39 44 39 59 49 45 42 56 75 77 Unknown protein Solyc04g014950.4 49 33 33 40 10 33 38 14 29 21 33 24 27 33 39 Glycosyltransferase (AHRD V3.3 *-* A0A200QMY3_9MAGN) Solyc04g014960.4 438 208 234 318 159 196 248 136 191 164 276 143 269 218 473 Glycosyltransferase (AHRD V3.3 *-* A0A200QMY3_9MAGN) Solyc04g014970.2 36 29 26 26 40 49 52 54 26 27 25 34 14 16 16 Unknown protein Solyc04g014980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g014990.3 13 3 1 6 0 1 0 0 1 8 1 0 0 4 36 Glycosyltransferase (AHRD V3.3 *-* A0A0A1WCT3_NICAT) Solyc04g014995.1 0 2 0 0 1 3 0 2 0 1 0 1 0 0 0 Exocyst complex component EXO84C (AHRD V3.3 *-* A0A1U8FJ63_CAPAN) Solyc04g015000.2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 LRR receptor-like serine/threonine-protein kinase EFR (AHRD V3.3 *-* A0A1S4CZ67_TOBAC) Solyc04g015010.4 6 16 0 3 0 0 0 0 5 0 0 0 3 8 6 Microtubule-associated protein 70-2 (AHRD V3.3 *** A0A2G2XYG4_CAPAN) AT4G17220 Solyc04g015020.3 2001 1201 791 820 1059 834 787 734 911 979 1150 550 1062 1096 1842 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* B3H4A8_ARATH) AT4G16380 Solyc04g015030.4 270 744 529 593 1764 1898 1786 1407 735 439 761 701 593 640 366 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6RB34_ACTCH) Solyc04g015040.3 75 185 311 148 291 311 260 312 205 113 166 169 132 154 238 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G2XYE0_CAPAN) AT2G43560 Solyc04g015050.3 337 553 447 421 639 570 607 637 540 434 430 513 639 655 372 Trafficking protein particle complex subunit (AHRD V3.3 *** A0A2G2XYK8_CAPAN) AT5G58030 Solyc04g015060.3 0 0 0 0 2 3 0 0 2 0 0 0 0 0 0 Nuclear transcription factor Y subunit B-6 (AHRD V3.3 *** A0A2G3CDL2_CAPCH) AT5G47670 Solyc04g015070.3 137 152 122 143 197 150 165 178 166 137 112 189 115 164 85 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LMA8_ARTAN) AT5G47710 Solyc04g015080.4 118 96 73 75 81 91 86 62 73 77 54 53 115 116 110 oxidoreductase%2C 2OG-Fe(II) oxygenase family protein (AHRD V3.3 *** AT2G22260.5) AT2G22260 Solyc04g015090.3 1 2 0 2 0 1 0 0 7 3 0 4 2 0 0 DnaJ domain-containing protein/RRM_6 domain-containing protein (AHRD V3.3 *** A0A1Q3CAH5_CEPFO) Solyc04g015100.3 1066 775 591 739 524 540 580 612 820 866 551 868 1074 878 839 Acetyl-CoA C-acetyltransferase (AHRD V3.3 *** D9U856_BACMN) AT5G47720 Solyc04g015110.3 2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827) (AHRD V3.3 *-* A0A1P8AUD2_ARATH) Solyc04g015120.3 16 8 2 1 2 0 0 1 1 5 4 0 3 2 6 U-box domain-containing protein 35 (AHRD V3.3 *** A0A2I4F8Y4_9ROSI) AT5G47740 Solyc04g015130.3 1784 1574 1557 1705 1523 1721 1756 1542 1506 1449 1771 1244 1852 1568 1670 Protein kinase G11A (AHRD V3.3 *** A0A2G2XYG0_CAPAN) AT5G47750 Solyc04g015150.4 72 131 274 256 152 188 162 195 198 114 140 144 164 193 122 Phosphoglycolate phosphatase (AHRD V3.3 *** A0A2G3CDP2_CAPCH) AT5G47760 Solyc04g015160.3 445 331 414 413 344 394 408 310 425 402 399 297 441 394 433 C2 and GRAM domain-containing protein (AHRD V3.3 *** A0A2G2ZFB6_CAPAN) AT1G03370 Solyc04g015170.3 723 997 901 790 894 1016 1012 987 894 731 888 957 870 934 806 FHA domain-containing protein (AHRD V3.3 *** A0A1Q3CXK4_CEPFO) AT5G47790 Solyc04g015180.3 1164 1069 1154 1143 1273 1268 1256 1050 787 817 917 897 972 1130 987 DNA-directed RNA polymerase II subunit 4 (AHRD V3.3 *** A0A1U8HA52_CAPAN) AT4G15950 Solyc04g015190.3 850 987 1213 1112 1077 1260 1183 905 905 924 1077 1080 1117 1027 1240 Glucan endo-1,3-beta-glucosidase 8 (AHRD V3.3 *** A0A2G2ZFB8_CAPAN) AT4G17180 Solyc04g015200.3 1508 447 336 602 255 218 248 272 459 1187 551 634 284 496 786 ATP-dependent 6-phosphofructokinase (AHRD V3.3 *** A0A2G3CDP5_CAPCH) AT5G47810 Solyc04g015210.4 395 489 672 498 718 646 519 500 403 504 631 510 460 484 486 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc04g015220.4 4 1 3 0 1 0 4 2 2 2 1 0 0 0 26 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc04g015250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN) Solyc04g015260.1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 Unknown protein Solyc04g015270.3 1097 1934 1786 1849 1879 1720 1851 1960 2259 1614 1877 1731 1759 1530 1882 Hexosyltransferase (AHRD V3.3 *** A0A2G3CDQ9_CAPCH) AT5G47780 Solyc04g015280.3 421 1256 1144 1421 1938 1870 1821 1930 1697 920 1171 1770 1120 1249 1083 Zinc finger C3HC4 type (RING finger) protein (AHRD V3.3 *-* A0A2K3NMH0_TRIPR) Solyc04g015290.3 1339 1225 1707 1508 1820 1859 1675 1866 1191 1308 1517 1489 1227 1376 1286 Myb family transcription factor APL (AHRD V3.3 *** A0A2G3CDT5_CAPCH) Solyc04g015300.3 1176 1222 1597 1573 1561 1746 1481 1490 1279 1313 1269 1493 1382 1387 1413 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q8GWG9_ARATH) AT4G17150 Solyc04g015305.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g015330.3 409 427 455 504 480 465 441 526 579 489 435 586 432 570 427 Phosphoglycerate mutase family protein (AHRD V3.3 *** A0A1I9LM48_ARATH) AT3G52155 Solyc04g015340.3 565 805 819 935 686 787 811 749 1389 1155 1151 976 875 1020 791 Carboxypeptidase (AHRD V3.3 *** A0A2G2VL35_CAPBA) AT3G07990 Solyc04g015350.3 968 673 550 684 513 497 426 564 712 813 533 657 641 655 591 Phosphatidylinositol 3-kinase (AHRD V3.3 *** I0J3F1_ARAHH) AT1G60490 Solyc04g015360.3 464 544 1836 655 436 442 429 367 807 401 3363 649 827 633 1275 GATA transcription factor (AHRD V3.3 *** K4BQ39_SOLLC) AT3G54810 Solyc04g015370.3 2541 2706 2725 2793 2814 2554 2403 2333 1735 1604 2313 1929 2743 2663 3043 Acyl carrier protein (AHRD V3.3 *** A0A2G3CDT8_CAPCH) AT1G65290 Solyc04g015380.1 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** AT1G11320.1) AT1G11320 Solyc04g015390.2 36 37 55 26 78 112 100 90 39 20 66 29 44 70 27 GDSL esterase/lipase (AHRD V3.3 *** AT1G11320.1) AT1G11320 Solyc04g015400.3 437 420 388 370 349 364 323 279 256 295 321 243 565 472 437 GDSL esterase/lipase (AHRD V3.3 *** AT1G11320.1) AT1G11320 Solyc04g015430.4 34 78 41 31 113 93 106 57 47 21 66 43 37 68 69 GDSL esterase/lipase (AHRD V3.3 *** AT1G11320.1) AT1G11320 Solyc04g015440.4 224 226 277 275 278 327 282 296 390 310 317 357 225 297 281 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G3CDU0_CAPCH) AT4G31850 Solyc04g015450.3 1834 1495 1424 1308 1317 1457 1329 1523 1337 1361 1227 1187 1111 1404 1350 extensin X55684 AT5G08650 Solyc04g015460.4 53 68 64 64 20 17 14 8 46 29 96 15 60 44 114 Protein kinase domain (AHRD V3.3 *** A0A200QIT5_9MAGN) AT5G35370 Solyc04g015470.3 243 550 1061 814 774 1103 1026 879 918 613 980 968 596 836 951 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *** K4BQ49_SOLLC) Solyc04g015480.3 272 323 309 310 266 270 265 319 442 321 258 378 350 370 250 BTB/POZ domain protein TNFAIP protein (AHRD V3.3 *** AT4G33480.1) AT4G33480 Solyc04g015490.4 419 1398 614 930 1915 1518 1579 2394 1585 888 721 1343 940 1015 978 Mg-protoporphyrin IX chelatase (AHRD V3.3 *** A0A2G2ZF66_CAPAN) AT1G08520 Solyc04g015500.3 1490 598 537 575 475 484 424 400 500 627 558 623 450 506 714 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3DFU3_CEPFO) AT3G18960 Solyc04g015510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Plant invertase/pectin methylesterase inhibitor superfamily protein, putative (AHRD V3.3 *** A0A061F3F8_THECC) AT5G24370 Solyc04g015520.3 1490 599 284 871 74 82 73 76 281 358 388 147 592 699 3503 Remorin (AHRD V3.3 *** A0A200Q6K8_9MAGN) AT3G57540 Solyc04g015530.3 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LRJ2_ARTAN) AT3G57510 Solyc04g015540.1 17 119 113 160 163 252 227 176 121 63 73 107 119 88 98 fission regulator-like protein (AHRD V3.3 *-* AT3G57500.1) AT3G57500 Solyc04g015560.4 492 546 1109 1173 387 592 690 444 1339 573 1000 1064 944 1170 1495 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A2U1QCD6_ARTAN) Solyc04g015570.3 162 128 189 136 89 107 101 79 130 164 255 95 126 131 190 Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 (AHRD V3.3 *** A0A2G2XAH5_CAPBA) AT2G41835 Solyc04g015580.3 482 491 481 558 456 504 486 496 550 425 391 476 405 586 523 Arm repeat superfamily protein (AHRD V3.3 *** A0A2K3NTC9_TRIPR) AT2G41830 Solyc04g150111.1 297 869 1059 793 885 879 904 804 632 513 717 541 1101 816 786 ozone-responsive stress-like protein (DUF1138) (AHRD V3.3 *** AT1G01170.2) Solyc04g015590.4 54 59 31 44 42 58 52 69 47 19 21 17 20 16 20 Bifunctional polymyxin resistance protein, ArnA (AHRD V3.3 *** A0A2U1QHU7_ARTAN) Solyc04g015600.3 860 1461 1185 1370 1536 1418 1443 1554 1587 905 1126 1295 1149 1326 1203 Leucine-rich repeat receptor-like tyrosine-protein kinase (AHRD V3.3 *** A0A2R6R578_ACTCH) AT2G41820 Solyc04g015610.3 0 0 11 0 0 0 0 0 2 0 7 0 0 0 0 DUF642 domain-containing protein (AHRD V3.3 *** A0A1Q3AUQ6_CEPFO) AT2G41810 Solyc04g015620.3 813 1264 1802 1639 1912 1787 2261 1560 3374 1737 2346 2889 1020 1778 1974 DUF642 domain-containing protein (AHRD V3.3 *** A0A1Q3AUQ6_CEPFO) AT2G41810 Solyc04g015630.2 8 36 15 15 28 20 38 19 33 21 18 45 24 18 7 NBS-LRR resistance-like protein (AHRD V3.3 *-* A0A2U1KK01_ARTAN) Solyc04g015640.1 0 0 0 6 12 1 8 9 7 1 3 11 1 1 0 Disease resistance protein rga3-like (AHRD V3.3 *** A0A2K3NCR1_TRIPR) Solyc04g015635.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4EGG2_9ROSI) Solyc04g015660.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A2K3M171_TRIPR) Solyc04g015680.3 3346 2812 2743 2471 2155 2472 2379 2642 3124 2924 2296 2538 3222 3084 2390 insulin degrading enzyme AT2G41790 Solyc04g015690.4 842 672 536 500 446 481 556 549 628 663 548 535 755 755 629 Insulinase (Peptidase family M16) family protein (AHRD V3.3 *** A0A2U1LWG8_ARTAN) Solyc04g015700.1 8 0 4 13 10 10 17 6 8 2 25 8 5 9 3 hypothetical protein (AHRD V3.3 *-* AT3G57450.1) Solyc04g015705.1 13 14 3 9 16 18 11 7 10 10 8 5 8 23 11 Unknown protein Solyc04g015710.3 77 72 79 40 68 56 98 90 68 33 32 55 65 75 21 dentin sialophosphoprotein-like protein (AHRD V3.3 *-* AT5G02520.2) Solyc04g015720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g015730.3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 hypothetical protein (AHRD V3.3 *-* AT3G57440.2) AT3G57440 Solyc04g015740.3 461 565 653 669 665 736 699 775 839 717 580 663 591 635 570 transmembrane protein%2C putative (DUF288) (AHRD V3.3 *** AT2G41770.1) AT2G41770 Solyc04g015750.3 5161 8580 892 3396 11929 10600 11580 14661 7437 8896 1108 5375 4303 1516 947 CobN/magnesium chelatase (AHRD V3.3 *** A0A200PZ28_9MAGN) AT5G13630 Solyc04g015760.4 151 168 226 215 301 248 251 256 170 185 229 201 189 212 335 Protein N-terminal glutamine amidohydrolase (AHRD V3.3 *-* A0A2G3CDQ6_CAPCH) AT2G41760 Solyc04g015770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein N-terminal glutamine amidohydrolase (AHRD V3.3 *-* A0A2G2ZF40_CAPAN) Solyc04g015780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein N-terminal glutamine amidohydrolase (AHRD V3.3 *-* A0A2G2XAD6_CAPBA) Solyc04g015790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein N-terminal glutamine amidohydrolase (AHRD V3.3 *-* A0A2G2XAD6_CAPBA) Solyc04g015800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein N-terminal glutamine amidohydrolase (AHRD V3.3 *-* A0A2G2XAD6_CAPBA) Solyc04g015810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g015820.1 2 11 0 4 0 0 0 2 39 18 3 19 25 10 10 Unknown protein Solyc04g015830.3 2207 3172 2671 2655 3164 2776 3035 3437 3228 2483 2682 2242 2924 2969 2717 Villin (AHRD V3.3 *** A0A2P5EN25_TREOI) AT2G41740 Solyc04g015850.3 791 1926 1762 1955 2531 2015 2139 2162 2002 2428 1769 1721 1485 872 1270 Transmembrane protein (AHRD V3.3 *** Q9M2K7_ARATH) Solyc04g015930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g015935.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Unknown protein Solyc04g015940.3 1253 1395 1008 841 787 786 866 744 918 860 836 1058 1186 1315 1161 ARM repeat superfamily protein (AHRD V3.3 *** F4JNL5_ARATH) AT4G23540 Solyc04g015950.3 305 262 390 208 235 228 257 182 221 189 196 193 245 358 310 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CCZ0_CAPCH) AT2G41720 Solyc04g015960.3 30 34 49 66 56 53 41 38 83 49 45 47 57 42 26 NAC domain-containing protein 26 (AHRD V3.3 --* XP_007202186.2) Solyc04g015970.3 1945 1265 1184 1413 612 696 776 741 1309 1552 1378 958 1474 1437 1598 ABC transporter A family member 1 (AHRD V3.3 *** A0A2G3CCY6_CAPCH) AT2G41700 Solyc04g015975.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc04g015990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cation/H(+) antiporter 28-like (AHRD V3.3 *** A0A2I4E9X5_9ROSI) AT3G52080 Solyc04g016000.3 12 30 30 13 10 40 17 26 79 118 245 90 48 51 31 Heat shock transcription factor protein 8 (AHRD V3.3 *** A0A1W6LWG5_FRAAN) AT2G41690 Solyc04g016010.4 226 186 188 136 134 185 195 142 134 241 210 143 139 120 213 Thioredoxin reductase (AHRD V3.3 *** A0A2G3BH62_CAPCH) Solyc04g150112.1 465 183 338 262 137 201 191 48 100 210 452 158 113 177 367 Transmembrane protein, putative (DUF247) (AHRD V3.3 --* Q9SN03_ARATH) Solyc04g016020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UPF0481 protein At3g47200-like (AHRD V3.3 *-* A0A2I4E3Y5_9ROSI) Solyc04g016030.1 1 0 0 1 0 1 0 0 0 2 1 0 0 2 7 UPF0481 protein At3g47200-like (AHRD V3.3 *-* A0A2I4DWW4_9ROSI) Solyc04g016040.1 25 21 7 23 4 13 5 1 8 8 1 0 20 2 38 Unknown protein Solyc04g016050.3 291 231 181 234 173 225 203 146 165 201 197 178 215 224 202 Ribosome biogenesis GTPase A (AHRD V3.3 *-* A0A1J3EQ97_NOCCA) AT2G41670 Solyc04g016060.1 7 64 41 42 63 55 63 67 79 58 47 76 56 72 45 Protein MIZU-KUSSEI 1 (AHRD V3.3 *** A0A1U8GTB5_CAPAN) AT2G41660 Solyc04g016070.2 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 agamous-like MADS-box protein AGL15 (AHRD V3.3 *** A0A2I4ECY7_9ROSI) Solyc04g016080.2 108 456 605 878 1264 1507 1217 1403 644 424 599 984 114 423 400 Kinesin-4 (AHRD V3.3 *** A0A2G2ZFA6_CAPAN) AT3G10310 Solyc04g016085.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acetylornithine aminotransferase, chloroplastic/mitochondrial (AHRD V3.3 *** A0A2G3BZI2_CAPCH) Solyc04g016120.2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Unknown protein Solyc04g016130.3 1112 724 865 765 772 777 837 681 650 701 620 790 674 793 761 F-box/LRR plant protein (AHRD V3.3 *** G7J3V2_MEDTR) AT5G63520 Solyc04g016150.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR plant protein (AHRD V3.3 *-* G7J3V2_MEDTR) Solyc04g016160.4 180 208 211 262 336 335 330 303 206 213 154 218 182 240 145 F-box/LRR-repeat protein At5g63520-like (AHRD V3.3 *** A0A2I4FAV8_9ROSI) AT5G63520 Solyc04g016180.3 347 317 384 363 540 660 562 568 293 248 330 302 127 297 284 Glycosyltransferase (AHRD V3.3 *** A0A2K3N592_TRIPR) AT2G41640 Solyc04g016185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VA19_9ASPA) Solyc04g016175.2 59 89 43 110 77 77 117 83 65 50 77 68 70 100 77 RNA-binding protein (AHRD V3.3 *-* Q941H9_TOBAC) Solyc04g016190.1 11 26 23 1 6 5 2 1 40 223 482 75 15 7 13 Glycosyltransferase (AHRD V3.3 *** A0A0A1WDL3_NICAT) Solyc04g016200.1 234 368 622 967 178 126 187 191 1109 796 606 1227 589 504 377 Glycosyltransferase (AHRD V3.3 *** A0A0A1WDL8_NICAT) Solyc04g016210.4 78 25 25 25 0 6 9 2 19 53 32 54 49 40 28 Glycosyltransferase (AHRD V3.3 *** A0A0A1WCD6_NICAT) Solyc04g016220.4 14 17 39 58 9 2 8 2 870 349 452 663 18 22 27 Glycosyltransferase (AHRD V3.3 *-* A0A0A1WC49_NICAT) Solyc04g016230.4 62 222 118 204 400 262 244 423 219 358 88 204 264 240 145 Glycosyltransferase (AHRD V3.3 *** A0A0A1WCD6_NICAT) Solyc04g016240.3 2581 2606 2265 2081 2285 2286 2387 2494 2144 2043 1996 2530 2788 2644 2249 Nuclear pore protein (AHRD V3.3 *** A0A2G2ZFG2_CAPAN) AT2G41620 Solyc04g016250.3 43 38 64 45 13 22 13 18 12 34 24 30 114 57 32 Mitochondrial glycoprotein (AHRD V3.3 *** A0A2U1NRX0_ARTAN) AT2G41600 Solyc04g016260.3 1367 1255 1695 1032 864 970 944 951 1141 1398 809 984 2138 1611 694 Calcium-transporting ATPase (AHRD V3.3 *** A0A1U8GKV2_CAPAN) AT3G57330 Solyc04g016270.2 196 165 469 295 161 252 216 104 101 144 280 133 336 297 157 Unknown protein Solyc04g016280.3 0 0 0 0 0 1 4 5 0 1 1 8 0 0 0 Nucleotide-sugar transporter family protein (AHRD V3.3 *** A0A2U1PWK4_ARTAN) AT5G04160 Solyc04g016290.3 436 485 634 568 891 987 849 699 515 396 597 608 413 746 1263 Rho_N domain-containing protein (AHRD V3.3 *-* A0A1Q3DAL3_CEPFO) AT2G41550 Solyc04g150113.1 156 204 160 137 167 176 194 165 197 120 200 148 253 207 206 threonine-tRNA ligase 2 (AHRD V3.3 *** AT3G57320.1) AT3G57320 Solyc04g016310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A1U8FV93_CAPAN) Solyc04g016330.3 110 237 279 303 486 452 386 450 346 171 296 352 211 233 273 Glycerol-3-phosphate dehydrogenase [NAD(+)] (AHRD V3.3 *** A0A2G3CDF8_CAPCH) AT2G41540 Solyc04g016335.1 1 2 4 0 1 2 1 0 0 0 1 3 3 2 1 40S ribosomal protein S4 (AHRD V3.3 *-* A0A2G2Z764_CAPAN) Solyc04g016360.3 3723 4187 3429 4281 5571 4225 4318 5473 5436 4714 3893 5523 4251 4409 5125 S-formylglutathione hydrolase (AHRD V3.3 *** A0A2G2ZFA7_CAPAN) AT2G41530 Solyc04g016370.3 1116 1316 1285 1153 1224 1536 1513 1290 1261 951 1118 1121 1128 1636 1330 DNA helicase INO80 (AHRD V3.3 *** A0A2G2ZF33_CAPAN) AT3G57300 Solyc04g016380.3 1102 2128 1446 1155 1196 1255 1254 1199 946 662 977 1021 2515 2105 1233 Ribosome biogenesis protein BRX1-like protein (AHRD V3.3 *** A0A1U8GKR7_CAPAN) AT3G15460 Solyc04g016390.2 44 117 85 119 100 104 128 108 86 57 70 62 139 121 80 50S ribosomal protein L33 (AHRD V3.3 *** J7FNN0_OLEEU) AT5G18790 Solyc04g016410.3 971 787 839 714 789 871 870 787 817 750 689 786 603 830 707 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein (AHRD V3.3 *** F4K0Y5_ARATH) Solyc04g016420.3 126 48 72 91 58 33 31 27 31 28 138 37 103 141 453 hypothetical protein (AHRD V3.3 *-* AT5G04000.2) AT5G04000 Solyc04g016430.3 630 233 123 257 156 133 100 133 221 189 121 244 369 236 214 Cytokinin dehydrogenase 1 (AHRD V3.3 *** A0A2G2ZF38_CAPAN) AT2G41510 Solyc04g016440.4 72 56 159 121 134 127 120 98 144 112 105 143 81 84 65 Protein FATTY ACID EXPORT 1, chloroplastic (AHRD V3.3 *** A0A2G2XAS4_CAPBA) AT3G57280 Solyc04g016460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 Unknown protein Solyc04g016470.4 16 0 0 2 6 6 10 3 7 9 8 2 5 4 0 LEQA L.esculentum TomQ'a beta(1,3)glucanase Solyc04g016480.3 127 458 307 316 549 502 537 307 532 199 721 282 272 329 783 SUN-like protein 12 AT5G03960 Solyc04g016490.4 42 99 110 71 117 146 134 129 116 133 96 114 87 150 64 Purple acid phosphatase 16 (AHRD V3.3 *** A0A2U1NPL5_ARTAN) AT3G10150 Solyc04g016510.3 2692 2123 2094 1936 2018 2018 1839 2285 1770 2391 1871 2543 1779 2136 1968 WD40 repeat (AHRD V3.3 *** A0A200QWT5_9MAGN) AT2G41500 Solyc04g016520.3 561 933 883 901 983 893 964 973 750 742 685 764 1223 1070 796 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (AHRD V3.3 *** A0A2G2XAT5_CAPBA) AT2G41490 Solyc04g016530.3 407 487 502 451 656 704 670 706 562 325 367 583 389 646 377 DNA-(apurinic or apyrimidinic site) lyase (AHRD V3.3 *** A0A2G3CD81_CAPCH) AT2G41460 Solyc04g016540.2 111 120 159 163 94 105 164 158 141 123 68 169 98 171 109 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R2G9_9MAGN) AT2G39620 Solyc04g016550.4 541 403 490 646 356 496 600 341 370 324 459 331 285 392 482 Folylpolyglutamate synthase (AHRD V3.3 *** A0A1U8GL32_CAPAN) Solyc04g016560.2 18 21 19 50 29 31 51 48 38 22 43 27 14 28 34 Folylpolyglutamate synthase (AHRD V3.3 *-* A0A2G3CDA4_CAPCH) Solyc04g016570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 PAP-specific phosphatase HAL2-like (AHRD V3.3 *-* A0A2G2ZXI6_CAPAN) Solyc04g016580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A2G3DAV0_CAPCH) Solyc04g016590.3 23 27 43 79 42 70 56 44 46 26 32 49 41 51 104 Unknown protein Solyc04g016595.1 10 8 0 2 12 0 1 1 8 1 6 0 9 3 0 Unknown protein Solyc04g017590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g017610.2 357 301 312 339 283 315 266 307 264 296 234 259 272 314 258 F-box protein (AHRD V3.3 *** A0A2I0VRX1_9ASPA) AT1G68960 Solyc04g017620.4 262 252 377 474 201 292 336 147 155 236 385 190 203 255 363 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* K4CQN6_SOLLC) Solyc04g017625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3CEB3_NOCCA) Solyc04g017640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein, putative (DUF247) (AHRD V3.3 *** Q45GK4_ARATH) Solyc04g017650.4 336 410 302 270 417 369 393 436 322 315 227 402 305 350 270 BRCT domain-containing protein (AHRD V3.3 *** A0A1Q3BX64_CEPFO) AT2G41450 Solyc04g017660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g017665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *** A0A2U1LVQ4_ARTAN) Solyc04g017670.3 2 0 2 1 0 0 0 0 0 0 0 2 0 0 0 F-box protein (AHRD V3.3 *** H6VUS4_9ROSI) AT5G04010 Solyc04g017680.3 302 474 330 322 391 385 372 405 346 354 263 445 490 468 231 50S ribosomal protein L22 (AHRD V3.3 *** A0A1J3DSY6_NOCCA) AT4G28360 Solyc04g017690.3 10424 4843 6206 5286 3427 3168 3582 2942 4916 7634 7481 5152 5971 7618 14660 Protein EARLY RESPONSIVE TO DEHYDRATION 15 (AHRD V3.3 *** A0A1U8FFS2_CAPAN) AT2G41430 Solyc04g017700.4 253 336 265 428 361 421 428 366 330 309 292 319 277 355 326 N-acetylglucosaminyl transferase component family protein / Gpi1 family protein (AHRD V3.3 *** F4J262_ARATH) AT3G57170 Solyc04g017710.3 25441 13174 10059 14592 9034 9441 8649 10772 8459 14769 12586 12376 11725 10049 11143 Zinc finger transcription factor 32 AT1G07360 Solyc04g017720.3 182 124 408 722 148 211 125 183 142 148 72 341 132 483 269 Gibberellin regulated protein (AHRD V3.3 *** A0A2U1PE48_ARTAN) Solyc04g017723.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gag/pol polyprotein (AHRD V3.3 *-* Q6WAY7_PEA) Solyc04g150114.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc04g017740.1 5 0 0 0 0 0 3 0 2 1 12 1 13 1 0 Unknown protein Solyc04g017750.4 1338 1265 899 798 823 765 749 809 1326 1154 1009 845 1530 1007 1241 Plant calmodulin-binding-like protein (AHRD V3.3 *-* G7KRQ7_MEDTR) AT5G04020 Solyc04g017770.1 5 1 0 0 0 0 0 0 0 4 1 0 0 0 0 Oxygen-evolving enhancer protein 1, chloroplastic (AHRD V3.3 *-* PSBO_SOLTU) Solyc04g017780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like mobile domain-containing protein (AHRD V3.3 *-* A0A2U1NNU3_ARTAN) Solyc04g017790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain family protein (AHRD V3.3 *-* Q3E9E9_ARATH) Solyc04g017800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) Solyc04g017830.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g017840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like mobile domain-containing protein (AHRD V3.3 *-* A0A2U1KU31_ARTAN) Solyc04g017850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) Solyc04g017860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain family protein (AHRD V3.3 *-* Q3E9E9_ARATH) Solyc04g017870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g017873.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 15a (AHRD V3.3 *-* A0A2G2ZG46_CAPAN) AT1G15772 Solyc04g017877.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3K694_NOCCA) Solyc04g017880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) Solyc04g017890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) Solyc04g017900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain family protein (AHRD V3.3 *-* Q3E9E9_ARATH) AT1G50760 Solyc04g017910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) Solyc04g017920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) Solyc04g017925.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 15a (AHRD V3.3 *-* A0A2G2ZG46_CAPAN) AT1G15772 Solyc04g017930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain family protein (AHRD V3.3 *-* F4I9K2_ARATH) Solyc04g017940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) Solyc04g017945.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 15a (AHRD V3.3 *-* A0A2G2ZG46_CAPAN) AT1G15772 Solyc04g017950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g017960.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g150115.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A1J3CN06_NOCCA) Solyc04g018000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) Solyc04g018005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 15a (AHRD V3.3 *-* A0A2G2ZG46_CAPAN) AT1G15772 Solyc04g018010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain family protein (AHRD V3.3 *-* Q8RXC3_ARATH) Solyc04g018020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant mobile domain protein family (AHRD V3.3 *-* A0A1D6NQH5_MAIZE) Solyc04g018030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) Solyc04g018040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g018045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MYC6_TRIPR) Solyc04g018050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g018055.1 185 84 35 115 9 6 6 8 21 44 115 18 54 89 393 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *-* A0A2G3C9S8_CAPCH) Solyc04g018080.4 106 88 113 92 87 74 66 61 71 80 48 75 125 116 133 mediator of RNA polymerase II transcription subunit 15a (AHRD V3.3 --* XP_010319382.1) Solyc04g018085.1 52 29 39 56 21 56 50 26 36 40 37 39 30 34 37 Unknown protein Solyc04g018090.2 39 47 31 37 52 56 42 65 56 55 30 73 31 36 9 Sodium/hydrogen exchanger, putative, expressed (AHRD V3.3 *-* D8L9T1_WHEAT) Solyc04g018100.4 257 278 292 301 347 350 414 255 241 190 339 321 302 352 329 Sodium/hydrogen exchanger 8 (AHRD V3.3 *** A0A2G3CD66_CAPCH) Solyc04g018110.1 2407 1488 4750 1646 486 617 530 405 2163 1126 4446 1272 2639 1832 2205 Calmodulin-like protein (AHRD V3.3 *** T2C5E7_BRAJU) AT3G10190 Solyc04g018120.1 14 24 17 26 14 15 6 8 26 20 21 12 37 34 17 ARF guanine-nucleotide exchange factor GNOM-like (AHRD V3.3 --* XP_021678898.1) Solyc04g018130.1 26 12 28 6 4 3 5 4 15 15 28 9 14 15 2 Unknown protein Solyc04g018140.1 1024 386 432 491 265 244 264 223 170 605 497 448 180 329 178 Unknown protein Solyc04g018150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 --* A0A2G3ASY1_CAPCH) Solyc04g018155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g018160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g018170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g018210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g018250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2P1M7Z8_9LAMI) Solyc04g018255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g018300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g019310.3 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 UPF0481 protein At3g47200-like (AHRD V3.3 *** A0A2I4FE23_9ROSI) Solyc04g019313.1 2 0 5 1 0 0 0 0 0 0 0 0 0 0 0 UPF0481 protein At3g47200-like (AHRD V3.3 *** A0A2I4FE23_9ROSI) Solyc04g150116.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A078F8C6_BRANA) Solyc04g019317.1 89 33 114 87 24 54 74 35 53 40 151 45 27 78 140 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A1I9LQ25_ARATH) Solyc04g040220.3 388 334 248 468 516 432 417 387 399 486 402 488 478 374 438 BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G3LSH3_LOTJA) Solyc04g040210.4 259 102 201 334 19 25 23 15 79 147 118 27 125 175 271 Unknown protein Solyc04g040200.3 1703 1332 1498 1768 1795 1798 2003 1733 1194 1984 1469 1497 1559 1105 1245 Cellular retinaldehyde-binding/triple function, C-terminal (AHRD V3.3 *** B6T6T0_MAIZE) AT3G10210 Solyc04g040190.1 573 520 321 489 784 777 769 774 467 564 334 351 444 302 309 lycopene beta-cyclase,Pfam:PF05834 AT3G10230 Solyc04g040180.3 250 190 121 90 39 19 10 21 159 395 318 89 693 235 227 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A1Y1ICE6_KLENI) AT2G41380 Solyc04g040170.3 429 475 685 595 513 569 573 584 521 344 658 700 574 616 519 DNA-directed RNA polymerase V subunit 5A (AHRD V3.3 *** A0A1U8GKX3_CAPAN) AT3G57080 Solyc04g040160.4 1308 1581 269 783 2568 2089 2106 2887 1100 1656 222 938 953 222 144 Protochlorophyllide-dependent translocon component 52, chloroplastic (AHRD V3.3 *** A0A2G2ZF87_CAPAN) AT4G25650 Solyc04g040140.2 0 0 0 0 0 0 0 0 0 0 3 2 0 1 0 Unknown protein Solyc04g040145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc04g040130.1 259 136 13 47 11 18 21 6 28 76 54 18 133 302 62 Fatty acid desaturase (AHRD V3.3 *** E7CCD0_CAMMC) Solyc04g040120.1 21 13 1 10 5 3 0 3 2 10 0 4 14 5 2 Fatty acid desaturase (AHRD V3.3 *** E7CCC3_9BRAS) Solyc04g040110.3 499 593 808 664 783 757 686 825 719 490 593 816 560 745 592 Kinesin-related protein 4 (AHRD V3.3 *** A0A2G2WH17_CAPBA) AT3G10180 Solyc04g040115.1 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 HAT family dimerization domain-containing protein (AHRD V3.3 *-* A0A2K3LC77_TRIPR) Solyc04g040090.4 3 0 0 6 1 2 0 0 1 3 0 2 2 1 1 Strictosidine synthase-like protein (AHRD V3.3 *** A7WPL3_TOBAC) Solyc04g150123.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc04g040050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g040053.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT1G05970.2) Solyc04g040057.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g040040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 nuclease (AHRD V3.3 --* AT2G13770.1) Solyc04g040020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator ARR9 (AHRD V3.3 *-* A0A2G3CD70_CAPCH) Solyc04g040010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator ARR9 (AHRD V3.3 *-* A0A2G3CD70_CAPCH) Solyc04g040000.2 38 58 71 44 19 42 38 27 19 48 28 60 58 35 69 transmembrane protein (AHRD V3.3 *** AT3G57062.2) AT3G57062 Solyc04g039980.3 133 80 160 171 10 28 40 17 56 141 225 50 76 51 162 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* F4I270_ARATH) Solyc04g039970.1 0 0 1 0 0 0 1 2 0 0 0 0 0 0 7 Calcium-binding EF-hand family protein (AHRD V3.3 --* F4HZU8_ARATH) Solyc04g039960.4 0 0 1 1 0 0 0 6 3 7 13 4 1 5 0 Calcium-binding EF-hand protein (AHRD V3.3 *-* A0A072VB19_MEDTR) Solyc04g039950.4 2257 2175 1957 2266 1732 2143 2512 1997 1868 1863 2084 1769 1654 2393 2130 Mediator of RNA polymerase II transcription subunit 13 (AHRD V3.3 *** A0A2G2XAM6_CAPBA) AT1G55325 Solyc04g039940.3 95 63 55 95 55 115 86 64 70 67 99 70 73 101 145 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2ZEZ2_CAPAN) AT2G35030 Solyc04g039930.4 5 1 6 7 15 3 3 3 6 8 6 10 3 16 34 12-oxophytodienoate reductase-like protein (AHRD V3.3 *-* A0A2G3CPE0_CAPCH) Solyc04g039920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12-oxophytodienoate reductase (AHRD V3.3 *-* A0A2K3MPA4_TRIPR) Solyc04g039910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12-oxophytodienoate reductase (AHRD V3.3 *** A0A2K3MR74_TRIPR) Solyc04g039900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutaredoxin (AHRD V3.3 *** A0A200PSH1_9MAGN) Solyc04g039890.1 0 13 8 2 11 9 16 4 12 2 24 12 0 3 10 Protochlorophyllide-dependent translocon component 52, chloroplastic (AHRD V3.3 *-* A0A2G2XAP5_CAPBA) Solyc04g039880.3 2 20 17 9 50 62 44 15 28 18 80 52 10 16 29 Protochlorophyllide-dependent translocon component 52, chloroplastic (AHRD V3.3 *** A0A2G3CD67_CAPCH) Solyc04g039870.3 4 32 24 28 96 109 70 57 50 35 61 69 11 45 53 Pheophorbide a oxygenase, chloroplastic (AHRD V3.3 *-* A0A2G3B886_CAPCH) Solyc04g039850.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 ATP synthase subunit beta (AHRD V3.3 *-* Q95DW3_9ASTR) Solyc04g039840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *-* RBL_HYDFO) Solyc04g039845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *-* A0A0F7EVI5_LYCCN) Solyc04g039830.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (AHRD V3.3 *** ACCD_SOLLC) Solyc04g039820.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (AHRD V3.3 *-* A0A1U8QCF0_CAPAN) Solyc04g039810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf4 (AHRD V3.3 *** A0A2G3BYP9_CAPCH) Solyc04g039800.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A2P1N7K1_9LAMI) Solyc04g039790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A2K8FT61_9ROSI) Solyc04g039780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1S6PSF9_9ASTE) Solyc04g039770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G3B5U1_CAPCH) Solyc04g039775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g039750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g039730.3 761 678 1048 883 1113 1329 1132 947 725 740 851 794 749 786 702 protein NSP-INTERACTING KINASE 3-like (AHRD V3.3 *** A0A1S3ZQ35_TOBAC) AT1G60800 Solyc04g039733.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g039737.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc04g039700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 polyadenylate-binding protein-interacting protein 8 isoform X3 (AHRD V3.3 *-* XP_010313882.1) Solyc04g039705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3IKJ2_9ROSI) Solyc04g039690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g039693.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3MP37_TRIPR) Solyc04g039695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3L0X7_TRIPR) Solyc04g039697.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3NAK8_TRIPR) Solyc04g039670.3 33 125 63 68 33 15 28 0 216 123 249 236 50 140 45 ATP-citrate synthase (AHRD V3.3 *** B6TD54_MAIZE) AT1G60810 Solyc04g039650.4 49 75 133 97 71 106 107 56 89 54 118 48 82 92 175 Ribose-phosphate pyrophosphokinase 4 (AHRD V3.3 *-* A0A1J3K940_NOCCA) Solyc04g039620.2 292 325 197 242 345 258 231 365 380 403 218 380 381 400 231 Ribose-phosphate pyrophosphokinase (AHRD V3.3 *** A0A2U1NXC0_ARTAN) Solyc04g039625.1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc04g028580.3 118 135 100 75 107 82 60 170 169 204 71 111 122 94 75 Transcription factor jumonji (Jmj) family protein / zinc finger (C5HC2 type) family protein (AHRD V3.3 *-* A0A1P8BAS6_ARATH) Solyc04g028560.4 547 383 271 337 266 359 336 325 384 377 411 385 368 453 370 Lysine-specific demethylase REF6 (AHRD V3.3 *-* A0A1U8FXA8_CAPAN) Solyc04g028470.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6QF80_ACTCH) Solyc04g028460.1 1 3 0 0 0 0 0 0 0 1 0 0 0 0 0 DNA ligase-like protein%2C putative (DUF1645) (AHRD V3.3 *-* AT1G70420.1) Solyc04g028465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g028440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g028445.1 6 2 1 7 4 3 0 2 5 5 2 1 4 2 18 Unknown protein Solyc04g028410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A200QU12_9MAGN) Solyc04g028400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A200R2F6_9MAGN) AT3G51210 Solyc04g028390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A1Q3AX16_CEPFO) Solyc04g028380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2I4HG22_9ROSI) Solyc04g026380.4 177 266 285 333 366 324 415 312 294 204 286 231 320 283 330 AP-1 complex subunit mu-1 (AHRD V3.3 *** A0A2G3CGN9_CAPCH) Solyc04g026360.3 75 236 118 131 154 148 152 250 239 162 71 182 163 138 125 AP-1 complex subunit mu-1 (AHRD V3.3 *** A0A2G3CGN9_CAPCH) Solyc04g026350.3 5598 4523 3912 5631 4452 3502 3667 4354 3299 6404 3703 3970 4376 4213 3394 Caltractin (AHRD V3.3 *** A0A2G2ZI52_CAPAN) AT3G50360 Solyc04g026340.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (AHRD V3.3 *-* A0A1U8FN75_CAPAN) Solyc04g026320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2WIS3_CAPBA) Solyc04g026310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* H6T9G5_MOLVE) Solyc04g026300.1 296 290 241 771 395 349 413 422 205 442 278 332 195 286 151 Unknown protein Solyc04g026280.2 931 948 615 755 884 868 809 966 961 873 700 869 827 846 610 S3 self-incompatibility locus-linked pollen 3.15 protein (AHRD V3.3 *** Q7XAE6_PETIN) AT1G60995 Solyc04g026260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g026250.1 0 3 6 7 4 1 6 0 2 4 14 0 1 2 15 Unknown protein Solyc04g026230.1 0 0 2 1 6 2 11 4 2 0 1 1 0 1 0 Kinase like protein (AHRD V3.3 *-* O23334_ARATH) Solyc04g026220.4 432 300 284 412 296 376 413 259 324 323 400 375 285 415 530 Ubiquitin-like-specific protease 1D (AHRD V3.3 *-* A0A2G2WSE4_CAPBA) Solyc04g026210.3 0 0 0 1 0 1 2 0 0 1 3 1 0 3 0 Protein kinase (AHRD V3.3 *-* Q8LES3_ARATH) Solyc04g026200.3 483 356 404 294 328 317 321 305 308 279 347 285 448 438 458 Ubiquitin-like-specific protease 1D (AHRD V3.3 *** A0A2G2WSE4_CAPBA) AT1G60220 Solyc04g026180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g026170.3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A0A1WCD6_NICAT) Solyc04g026160.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A0A1WCT3_NICAT) Solyc04g026150.2 10 0 0 2 0 0 1 0 3 1 0 0 0 4 0 homeobox-leucine zipper protein ROC8-like (AHRD V3.3 --* XP_019066399.1) Solyc04g026155.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3JUZ2_TRIPR) Solyc04g026140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 antifungal protein ginkbilobin-2-like (AHRD V3.3 *** A0A2I4EKK9_9ROSI) Solyc04g026110.4 244 368 533 633 649 872 738 593 534 360 606 509 537 512 557 Disease resistance protein (AHRD V3.3 *** A0A200PUC6_9MAGN) AT3G46530 Solyc04g026100.1 1063 1983 2191 1484 2229 2440 2030 2026 1363 1024 1608 1571 2439 1924 1656 40S ribosomal protein S16 (AHRD V3.3 *** A0A2G3DIR8_CAPCH) AT2G09990 Solyc04g026080.3 1 1 0 0 0 1 1 0 0 0 0 0 0 0 5 Kinesin-like protein (AHRD V3.3 *-* O24147_TOBAC) Solyc04g026070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Checkpoint protein (AHRD V3.3 *-* A0A1U8G4P4_CAPAN) Solyc04g026060.1 0 0 0 0 0 0 0 1 0 2 0 0 1 1 0 Heat shock 70 kDa protein (AHRD V3.3 *-* A0A2G2YG57_CAPAN) Solyc04g026050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SPX domain-containing protein (AHRD V3.3 *-* D7MDY2_ARALL) Solyc04g026040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g026045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc04g026030.3 898 2972 2661 3180 3776 3623 3443 2927 2086 1965 1874 2401 4702 3334 2345 Spermidine synthase (AHRD V3.3 *** A0A088DA02_CAPAN),Pfam:PF01564 AT1G23820 Solyc04g026020.3 2 43 121 39 43 29 37 28 15 54 70 5 2 19 80 Sieve element occlusion b (AHRD V3.3 *** E2FKJ9_9SOLN) AT3G01680 Solyc04g026023.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g026000.2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Embryo defective protein (AHRD V3.3 *-* A0A2U1N625_ARTAN) Solyc04g026005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g025990.3 1188 1870 1452 1929 2282 2324 2438 2165 2781 2780 2798 3041 1406 2074 2252 Potassium transporter (AHRD V3.3 *** A0A2G3CGF8_CAPCH) AT1G60160 Solyc04g025995.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ranBP2-type zinc finger protein isoform X4 (AHRD V3.3 *-* XP_019068375.1) Solyc04g025970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *** A0A2K3LZS0_TRIPR) Solyc04g025950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g025940.3 1598 754 545 590 603 597 519 691 672 1053 481 752 791 799 639 Trehalose-6-phosphate synthase (AHRD V3.3 *** E5GC29_CUCME) AT1G23870 Solyc04g025930.3 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 Arid/bright DNA-binding domain-containing protein (AHRD V3.3 *-* A0A2K3NLD4_TRIPR) Solyc04g025933.1 16 3 8 8 5 7 6 2 2 1 2 1 4 0 0 Unknown protein Solyc04g025937.1 3 2 11 3 0 5 0 3 1 4 4 2 0 4 0 Unknown protein Solyc04g025910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter G family member 5 (AHRD V3.3 *-* A0A2U1NZ47_ARTAN) Solyc04g025915.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc04g025880.4 528 240 507 239 209 303 201 227 184 309 189 349 121 270 142 Potassium transporter (AHRD V3.3 *** A0A2G2VML6_CAPBA) AT1G70300 Solyc04g025870.4 511 1082 773 874 1089 1069 1076 1143 1097 874 791 999 944 976 752 AP-1 complex subunit gamma-1 (AHRD V3.3 *** A0A2G3CGI0_CAPCH) AT1G60070 Solyc04g025860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein RPP13 (AHRD V3.3 *-* A0A2G2X9C3_CAPBA) Solyc04g025850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein RPP13 (AHRD V3.3 *-* A0A2G2X9C3_CAPBA) Solyc04g025840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200Q3R7_9MAGN) Solyc04g025820.1 0 1 0 3 1 3 2 2 2 1 0 1 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200PUC6_9MAGN) Solyc04g150122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g025790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WAT1-related protein (AHRD V3.3 *-* K4BR19_SOLLC) Solyc04g025780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WAT1-related protein (AHRD V3.3 *** K4BR19_SOLLC) Solyc04g025770.1 17 16 21 7 10 10 5 15 12 10 6 15 21 12 23 Unknown protein Solyc04g025760.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 NAC domain-containing protein (AHRD V3.3 *** A0A2U1KVQ9_ARTAN) Solyc04g025750.3 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 WAT1-related protein (AHRD V3.3 *** K4BR19_SOLLC) AT1G70260 Solyc04g025755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exocyst complex component EXO84A (AHRD V3.3 *-* A0A2G2VT08_CAPBA) Solyc04g025740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HDG1 (AHRD V3.3 *-* A0A2I0VKD9_9ASPA) Solyc04g025730.1 4 0 0 0 9 0 0 2 4 4 3 6 1 0 0 Unknown protein Solyc04g025710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoisovalerate dehydrogenase subunit alpha (AHRD V3.3 *-* A0A2P6TP92_CHLSO) Solyc04g025690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g025670.4 1299 995 1317 1064 1184 1200 1244 819 727 720 1032 825 1030 1118 1630 protein LSM12 homolog (AHRD V3.3 *-* A0A2I4E1M4_9ROSI) Solyc04g025660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc04g025650.3 488 353 1218 339 318 378 335 417 309 743 844 297 325 297 210 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A2U1LBG7_ARTAN) AT4G15760 Solyc04g025653.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *** A0A1Q3BUG5_CEPFO) Solyc04g025657.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *-* A0A2K3MMP9_TRIPR) Solyc04g025640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1NN53_ARTAN) Solyc04g025610.2 176 103 165 98 158 153 114 89 79 180 300 165 181 168 186 Unknown protein Solyc04g025590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3MNP1_TRIPR) Solyc04g025580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3MUQ7_TRIPR) Solyc04g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VVU6_9ASPA) ATMG00810 Solyc04g025570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g025560.4 91 92 183 193 120 123 117 99 57 128 101 114 122 68 123 ADP-ribosylation factor (AHRD V3.3 *-* A0A2U1LV56_ARTAN) Solyc04g025550.1 5 7 9 18 1 6 7 3 10 4 4 6 4 1 4 Unknown protein Solyc04g025540.3 987 824 855 690 761 722 713 716 874 815 672 740 970 853 920 Anthranilate phosphoribosyltransferase (AHRD V3.3 *** A0A2U1M0N4_ARTAN) AT1G70570 Solyc04g025530.3 13 7 11 5 0 6 2 5 38 15 30 2 4 9 3 Glutamate decarboxylase (AHRD V3.3 *** A0A2G2YVX0_CAPAN) AT2G02010 Solyc04g150120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc04g025510.4 28 9 17 45 54 124 115 83 35 26 17 40 32 19 44 non-structural maintenance of chromosomes element 4 homolog A-like (AHRD V3.3 *** A0A2I4F0U4_9ROSI) Solyc04g025500.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein HDG11-like (AHRD V3.3 *-* A0A2I4GYW1_9ROSI) Solyc04g025490.1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc04g025480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc04g025470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g150119.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 alpha/beta-Hydrolases superfamily protein (AHRD V3.3 --* AT4G17470.4) Solyc04g025460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent protein kinase-related kinase (AHRD V3.3 *-* O23797_MAIZE) Solyc04g025450.3 96 75 203 130 151 212 217 104 99 95 226 115 90 121 130 Acetate/butyrate--CoA ligase AAE7, peroxisomal (AHRD V3.3 *-* A0A2G3CKN6_CAPCH) Solyc04g025455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VXM7_9ASPA) ATMG00810 Solyc04g025440.3 122 90 107 140 89 78 83 49 46 50 154 50 70 106 190 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1QD15_ARTAN) AT1G23460 Solyc04g025430.1 29 30 20 19 26 26 20 25 25 19 8 21 33 32 23 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1J3F688_NOCCA) AT1G23450 Solyc04g025410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** W0FG45_POPTR) AT5G05260 Solyc04g025400.3 0 0 11 0 0 0 0 0 0 0 0 0 0 1 0 Lipid phosphate phosphatase 1 (AHRD V3.3 *** A0A2G3CGS7_CAPCH) AT3G18220 Solyc04g025370.3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lipid phosphate phosphatase-like protein (AHRD V3.3 *** A0A072U232_MEDTR) Solyc04g025375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor (AHRD V3.3 *-* A0A1U8FBH1_CAPAN) Solyc04g025320.2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 (AHRD V3.3 *-* A0A2G2WI82_CAPBA) Solyc04g025300.3 2794 2614 2311 2094 2432 2397 2160 2488 2708 1717 1857 2112 2718 2801 2843 sgs3 innate immune response protein AT5G23570 Solyc04g025290.4 497 321 409 340 376 306 329 348 420 352 365 313 451 384 340 Peptide chain release factor 2 (AHRD V3.3 *** A0A1U8EW46_CAPAN) AT5G36170 Solyc04g025280.4 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A1J3J8W1_NOCCA) Solyc04g025283.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3CU16_CEPFO) Solyc04g025287.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LF16_TRIPR) Solyc04g025260.3 1046 1210 1126 1107 1227 1181 1181 1156 1308 1148 1251 1229 1757 1463 1126 Endoplasmic reticulum metallopeptidase 1 (AHRD V3.3 *** A0A1J3J9S4_NOCCA) AT5G20660 Solyc04g025240.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *-* Q9ZV08_ARATH) Solyc04g025230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *-* A0A2U1MZI8_ARTAN) Solyc04g025210.4 345 203 302 243 205 282 282 200 230 214 254 219 201 222 465 DUF668 domain-containing protein/DUF3475 domain-containing protein (AHRD V3.3 *** A0A1Q3CI27_CEPFO) Solyc04g025190.1 1 2 0 0 0 2 1 3 0 4 0 0 2 0 0 Unknown protein Solyc04g025180.4 34 26 8 30 11 27 31 38 42 31 13 44 32 44 56 ABC transporter G family member 24 (AHRD V3.3 *-* A0A2G2VGH5_CAPBA) Solyc04g025170.4 604 557 533 572 355 481 542 418 387 496 448 393 620 611 545 ABC transporter G family member 24 (AHRD V3.3 *** A0A2G2VGH5_CAPBA) Solyc04g025160.3 862 648 421 519 532 413 381 556 671 694 405 575 540 644 609 ATPase ASNA1 homolog 2-like (AHRD V3.3 *** A0A2I4FAM5_9ROSI) Solyc04g025120.2 114 63 36 54 59 61 55 40 56 55 66 66 72 61 86 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1NZV9_ARTAN) Solyc04g025125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g025110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *** A0A2K3LJJ6_TRIPR) Solyc04g025100.1 4 0 0 0 8 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc04g025090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL62 (AHRD V3.3 *-* A0A2G2XU83_CAPAN) Solyc04g025080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL62 (AHRD V3.3 *-* A0A2G2XU83_CAPAN) Solyc04g025070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL62 (AHRD V3.3 *-* A0A2G2XU83_CAPAN) Solyc04g025060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL62 (AHRD V3.3 *-* A0A2G2XJN1_CAPAN) Solyc04g025050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A0A2K3L7S8_TRIPR) Solyc04g025040.1 1980 1143 2239 4501 179 152 93 124 1095 1091 2123 536 1188 1078 3414 RNA-binding protein FUS (AHRD V3.3 *** XP_004237241.1) Solyc04g025030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *** A0A2K3L7S8_TRIPR) Solyc04g025000.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *-* A0A2G2XIC0_CAPBA) Solyc04g025005.1 2 0 14 13 0 4 2 4 0 3 0 11 0 3 0 receptor-like protein kinase (AHRD V3.3 *** A0A1U7WU94_NICSY) Solyc04g024990.3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *** A0A2G2XIC0_CAPBA) Solyc04g024980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* K4D288_SOLLC) Solyc04g024970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* K4D288_SOLLC) Solyc04g024960.1 477 505 379 474 341 408 342 265 403 280 490 257 434 333 587 Unknown protein Solyc04g024963.1 0 3 0 0 0 0 0 0 1 2 0 0 0 3 0 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc04g024965.1 0 1 0 0 0 0 2 0 1 0 1 0 4 1 11 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3JJ83_COCAP) Solyc04g024967.1 0 1 3 3 0 2 0 2 3 0 0 1 3 0 0 Unknown protein Solyc04g024950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g024940.3 398 367 355 381 341 427 361 317 370 308 390 354 367 342 457 F-box protein skip14-like (AHRD V3.3 *** A0A2K3P8W1_TRIPR) AT3G26000 Solyc04g024920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chlorophyllide a oxygenase chloroplastic (AHRD V3.3 *-* B6TZB6_MAIZE) Solyc04g024910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Long chain base biosynthesis protein 2a (AHRD V3.3 *-* A0A2G2ZCW1_CAPAN) Solyc04g024880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40S ribosomal protein S12 (AHRD V3.3 *-* A0A2G2VG43_CAPBA) Solyc04g150118.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc04g024840.3 194 342 124 170 150 122 94 190 93 81 93 63 90 112 73 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6QF80_ACTCH) Solyc04g024820.1 0 3 8 0 3 0 0 2 3 0 0 0 0 0 5 Unknown protein Solyc04g024810.2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 Unknown protein Solyc04g024780.1 3 10 1 10 1 2 0 2 1 1 0 0 7 5 2 DNA ligase 1-like (AHRD V3.3 *** A0A1U7VHC8_NICSY) AT1G23710 Solyc04g150117.1 0 0 0 0 0 2 0 0 0 4 0 0 0 0 0 Unknown protein Solyc04g024750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g024740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g024730.1 19 13 17 17 5 10 16 6 3 11 2 4 9 12 21 Unknown protein Solyc04g024720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan galactosyltransferase KATAMARI1 (AHRD V3.3 *-* A0A2K3NCT4_TRIPR) Solyc04g024710.4 167 176 201 101 65 123 136 134 149 161 128 132 178 157 129 Cysteine proteinases superfamily protein (AHRD V3.3 *** A0A2U1NKP1_ARTAN) AT5G04250 Solyc04g024690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g024650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Purple acid phosphatase (AHRD V3.3 *-* A0A2G2Z1X7_CAPAN) Solyc04g024640.1 0 0 0 0 0 1 0 0 0 1 14 0 0 0 0 Purple acid phosphatase (AHRD V3.3 *-* A0A2G2WCI9_CAPBA) Solyc04g024600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ASHH1 (AHRD V3.3 *-* A0A2G2Z215_CAPAN) Solyc04g024605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc04g024590.3 692 594 679 610 557 643 614 599 685 560 614 547 755 726 757 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1NGM8_ARTAN) AT3G03330 Solyc04g024580.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc04g024560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2S1U9Z2_9GENT) Solyc04g024550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A167NIB9_9SOLA) Solyc04g024540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2VDC7_CAPBA) Solyc04g024530.3 1521 1504 1596 1831 1778 1886 2066 1848 1594 1420 1557 1563 1392 1595 1338 Actin-related protein (AHRD V3.3 *** A0A200RCU3_9MAGN) AT1G13180 Solyc04g024520.3 693 782 796 679 751 850 822 701 723 499 681 638 726 803 792 hypothetical protein (AHRD V3.3 *** AT5G13310.2) AT5G13310 Solyc04g024510.3 448 435 699 506 520 597 567 448 367 417 575 396 583 458 580 CCR4-NOT transcription complex subunit (AHRD V3.3 *-* F4JWN4_ARATH) Solyc04g024500.3 527 626 335 443 535 457 439 734 583 779 304 585 594 457 264 CCR4-NOT transcription complex subunit (AHRD V3.3 *** AT5G18420.2) AT5G18420 Solyc04g024480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4-coumarate:CoA ligase (AHRD V3.3 *-* Q42879_LITER) Solyc04g024450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g024430.3 1714 480 300 427 391 349 443 346 229 869 461 457 270 379 449 Unknown protein Solyc04g024435.1 3 26 60 46 80 100 72 84 25 32 46 46 11 27 14 Unknown protein Solyc04g024420.3 321 484 468 361 656 464 410 499 508 359 319 427 492 523 407 Proteasome subunit beta (AHRD V3.3 *** A0A2G2VMP0_CAPBA) AT3G27430 Solyc04g024380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g024340.4 349 208 184 247 233 190 232 153 166 291 234 248 216 283 287 Acid phosphatase/vanadium-dependent haloperoxidase-related protein (AHRD V3.3 *** F4I989_ARATH) AT1G67600 Solyc04g045280.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g150124.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g045290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* Q9C5N4_ARATH) Solyc04g045300.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g045310.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF3537 domain-containing protein (AHRD V3.3 *** A0A1Q3DAV9_CEPFO) AT1G67570 Solyc04g045320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g045330.2 31 13 3 10 14 9 26 13 0 13 14 8 9 9 0 Unknown protein Solyc04g045340.3 2052 3011 2611 2519 3076 2868 3036 3715 3205 3092 2221 3127 2973 2752 2868 Phosphoglucomutase, cytoplasmic (AHRD V3.3 *** A0A2G2XRQ6_CAPBA) AT1G23190 Solyc04g150125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g045390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 *-* AT1G67540.2) AT1G67540 Solyc04g045410.3 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 T-complex protein 1 subunit epsilon (AHRD V3.3 *-* A0A200R4H4_9MAGN) Solyc04g045420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 T-complex protein 1 subunit epsilon (AHRD V3.3 *-* A0A1J7GII5_LUPAN) Solyc04g045425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polyprotein (AHRD V3.3 *-* Q9ZS84_SOLLC) Solyc04g045430.4 372 162 185 285 201 257 241 201 173 290 323 172 178 189 330 trihelix transcription factor ASR3-like (AHRD V3.3 *** A0A2I4FCD1_9ROSI) AT2G33550 Solyc04g045440.3 7 5 0 0 1 5 0 0 1 0 0 0 0 0 0 Unknown protein Solyc04g045450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g045470.4 331 388 407 384 378 439 438 406 312 383 343 326 343 337 299 O-fucosyltransferase (AHRD V3.3 *** A0A2P5CW83_PARAD) AT1G35510 Solyc04g045480.3 1628 1454 1276 1432 1241 1342 1173 1014 1052 1153 1236 1013 1755 1254 1464 Ubiquitin thioesterase (AHRD V3.3 *** A0A2I4FBU8_9ROSI) AT1G28120 Solyc04g045520.3 5 4 22 3 1 2 4 4 1 0 0 0 2 7 5 Unknown protein Solyc04g045525.1 0 0 1 1 0 5 0 0 0 1 1 0 0 0 0 Unknown protein Solyc04g045530.4 31 371 352 329 682 655 617 680 363 249 333 405 265 398 126 DNA primase large subunit (AHRD V3.3 *** A0A2G3BK14_CAPCH) AT1G67320 Solyc04g045540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *** K4EQH9_DATST) Solyc04g045550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc04g045560.4 357 244 228 230 311 332 306 266 301 295 272 253 234 217 268 Squamosa promoter-binding protein 3 Solyc04g045565.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g045580.4 223 251 289 202 282 189 264 303 252 299 166 332 346 240 240 phosphoribosylformylglycinamidine synthase (AHRD V3.3 *** AT1G27385.1) AT1G27385 Solyc04g045590.3 319 492 275 376 259 340 301 322 278 226 262 272 532 416 374 Alpha-ketoglutarate-dependent dioxygenase alkB (AHRD V3.3 *** A0A2G2WST3_CAPBA) AT1G11780 Solyc04g045600.4 779 1307 2053 2277 2471 2599 2638 1771 1739 1408 2430 1634 826 1139 2168 Protein kinase superfamily protein (AHRD V3.3 *** F4JTH2_ARATH) Solyc04g045620.3 545 1350 1504 1420 1698 1747 1774 1613 1330 1069 1357 1206 1396 1278 1118 NADH-ubiquinone oxidoreductase (AHRD V3.3 *** AT1G67350.2) AT1G67350 Solyc04g045630.3 1020 1033 662 874 864 1037 1063 1071 735 771 919 1063 684 980 631 CTD small phosphatase-like protein 2 (AHRD V3.3 *** A0A1U8GP65_CAPAN) AT5G11860 Solyc04g045640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g045650.3 238 290 259 300 354 300 242 313 303 309 299 311 291 263 270 Exostosin-like protein (AHRD V3.3 *** A0A2U1PVZ1_ARTAN) AT1G67410 Solyc04g045660.4 578 760 623 701 947 1023 1108 873 584 481 602 753 865 957 821 MLH1 AT4G09140 Solyc04g047670.2 5 13 3 12 11 15 17 10 18 24 4 14 24 22 22 Vesicle transport protein (AHRD V3.3 *** A0A2G2ZHK9_CAPAN) Solyc04g047680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 proline-rich protein 36-like (AHRD V3.3 --* XP_020153421.1) Solyc04g047690.4 47 51 64 41 40 53 63 32 51 42 59 41 77 58 49 Vesicle transport protein (AHRD V3.3 *-* S8CPN7_9LAMI) Solyc04g047700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g047720.4 867 1543 1095 1056 1491 1476 1321 1872 1430 1415 1036 1443 1838 1433 1032 ER membrane protein complex subunit 10 (AHRD V3.3 *** A0A2I4FBG3_9ROSI) AT1G65270 Solyc04g047740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g047750.3 627 841 661 591 865 666 676 961 912 626 614 831 868 832 509 Alpha-taxilin (AHRD V3.3 *** A0A1J3J675_NOCCA) AT5G50840 Solyc04g047760.2 46 106 77 84 67 71 85 84 51 64 26 96 74 82 27 Unknown protein Solyc04g047770.3 4520 3887 3237 3803 3334 3114 3142 3441 3437 4109 2856 3192 3183 3126 3295 VHS domain-containing protein (AHRD V3.3 *** A0A2G2ZIB2_CAPAN) AT3G16270 Solyc04g047780.1 0 0 0 0 0 0 1 0 6 0 0 1 0 1 0 Protein ROS1 (AHRD V3.3 *-* A0A2G2Y7I1_CAPAN) Solyc04g047790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4E852_9ROSI) Solyc04g047800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g047810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein ROS1 (AHRD V3.3 *-* A0A2G2Y7I1_CAPAN) Solyc04g047820.1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein ROS1 (AHRD V3.3 *-* A0A2G3B2M6_CAPCH) Solyc04g047830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein ROS1 (AHRD V3.3 *-* A0A2G3B2M6_CAPCH) Solyc04g047860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 neurofilament heavy polypeptide isoform X2 (AHRD V3.3 *-* XP_010313975.1) Solyc04g047870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *** A0A2K3L7S8_TRIPR) Solyc04g047880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g047885.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g047900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook motif DNA-binding family protein (AHRD V3.3 --* AT2G33620.4) Solyc04g048900.3 5267 3491 6811 1843 260 285 305 210 1873 5284 4937 711 13090 5102 2610 Calreticulin (AHRD V3.3 *** A0A2G3ASL1_CAPCH) AT1G08450 Solyc04g048905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain family protein (AHRD V3.3 *-* F4I9K2_ARATH) Solyc04g048910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200QLS9_9MAGN) Solyc04g048920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1P003_ARTAN) Solyc04g048930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Signal recognition particle subunit SRP68 (AHRD V3.3 *-* A0A1U8G8F6_CAPAN) Solyc04g048940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g048945.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc04g048950.4 801 506 487 413 328 371 389 364 377 571 525 361 593 571 571 MACPF domain-containing protein (AHRD V3.3 *** A0A1Q3B5D7_CEPFO) Solyc04g048960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *** A0A2K3MPD7_TRIPR) Solyc04g048970.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *-* A0A2K3MPA9_TRIPR) Solyc04g049000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin (AHRD V3.3 *** A0A7Z5_ROSHC) Solyc04g049005.1 4 3 0 14 0 0 0 0 6 3 10 2 8 6 2 Unknown protein Solyc04g049010.3 2607 1932 1872 1707 1451 1577 1761 1414 1533 1715 1887 1713 1520 1831 2021 ethylene insensitive 5/7 AT1G54490 Solyc04g049020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CXR1_CEPFO) Solyc04g049070.3 1445 2210 1587 1590 1874 1689 1659 2207 2494 2018 1336 1850 2759 2276 1774 alpha glucosidase II AT5G63840 Solyc04g049075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L2B9_TRIPR) Solyc04g049080.4 615 201 504 444 270 278 248 214 194 254 278 169 282 314 568 Tetraspanin (AHRD V3.3 *** A0A2U1M9G9_ARTAN) AT3G12090 Solyc04g049090.3 1094 754 855 539 285 227 326 306 656 797 1012 512 711 813 924 SlMlo1 Solyc04g049100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK-related protein kinase (AHRD V3.3 *-* A0A1U8EC13_CAPAN) Solyc04g049105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: putative transporter svop-1 (AHRD V3.3 --* XP_021743117.1) Solyc04g049110.1 5 1 0 0 0 0 0 0 3 2 2 1 0 1 0 Unknown protein Solyc04g049120.4 4318 3005 2779 2413 2202 2867 2538 2366 2972 2829 2791 2674 2359 2994 3029 Nuclear receptor corepressor 1 (AHRD V3.3 *-* A0A1J3EKK6_NOCCA) AT3G52250 Solyc04g049130.4 572 581 417 428 466 405 363 538 541 588 314 539 491 542 350 Iron-sulfur cluster biosynthesis family protein (AHRD V3.3 *** A0A2U1NA61_ARTAN) AT5G03900 Solyc04g150126.1 1 0 0 0 0 5 0 1 4 0 5 1 0 0 0 Unknown protein Solyc04g049140.4 1350 1901 1410 1171 1675 1929 1696 2028 1684 1087 1101 1653 1750 1959 1070 Transcription factor jumonji (JmjC) domain-containing protein (AHRD V3.3 *** Q8VYB9_ARATH) Solyc04g049150.3 45 19 2 17 15 6 14 2 27 28 52 51 11 25 14 Unknown protein Solyc04g049160.3 560 601 703 658 754 702 796 727 650 647 654 629 552 662 742 Calcium-dependent protein kinase (AHRD V3.3 *** A0A2U1MRE6_ARTAN) Solyc04g049170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049180.3 773 825 780 755 853 903 812 942 706 1002 612 911 990 815 820 rhomboid-like protein 19 (AHRD V3.3 *** A0A2I4FB13_9ROSI) AT3G07950 Solyc04g049190.1 28 25 21 4 20 22 26 17 5 8 36 19 15 15 1 E3 ubiquitin protein ligase DRIP2-like (AHRD V3.3 *** XP_010319865.1) Solyc04g049200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-adenosylmethionine synthase (AHRD V3.3 *-* S6A1Z8_NICAT) Solyc04g049210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin (AHRD V3.3 *-* Q7XZI9_GOSHI) Solyc04g049220.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin (AHRD V3.3 *-* A0A2I0VLP0_9ASPA) AT1G73910 Solyc04g049222.1 1 6 10 4 2 1 0 0 1 7 3 3 0 1 0 Unknown protein Solyc04g150127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) Solyc04g150128.1 400 251 209 248 171 235 182 192 229 253 216 215 182 289 274 Unknown protein Solyc04g049228.1 4 0 0 0 0 0 0 0 0 0 0 0 1 2 4 Transposon, En/Spm-like, Transposase-associated domain protein (AHRD V3.3 *-* A0A2U1N4P4_ARTAN) Solyc04g049250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transport membrane protein (AHRD V3.3 *** S4SJ55_GOSHI) Solyc04g049270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1L2L8_ARTAN) Solyc04g049290.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TRAF-like superfamily protein (AHRD V3.3 *-* AT3G11950.5) AT3G11950 Solyc04g049300.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049305.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GATA zinc finger domain-containing protein 15-like (AHRD V3.3 *-* XP_025886282.1) Solyc04g049310.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3JJ83_COCAP) Solyc04g049330.3 3131 4427 5725 6543 5880 6064 6465 5107 4807 4280 6502 4333 5394 5224 7284 V-type proton ATPase subunit G (AHRD V3.3 *** Q5GMM8_CAPCH) AT3G01390 Solyc04g049340.3 27 140 75 127 188 179 162 137 144 75 70 115 52 66 124 Tryptophan/tyrosine permease (AHRD V3.3 *** A0A2U1PXY3_ARTAN) Solyc04g049350.4 2799 4071 2419 3165 4147 3695 4022 4008 3173 4867 3039 3448 3638 3561 2462 chorismate synthase 1 precursor AT1G48850 Solyc04g049360.3 301 534 331 455 703 631 763 599 422 306 298 296 358 495 342 aminodeoxychorismate synthase/glutamine amidotransferase AT2G28880 Solyc04g049370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049380.4 695 628 391 388 622 552 478 816 718 947 280 657 452 462 435 Protein kinase superfamily protein (AHRD V3.3 *-* O80962_ARATH) Solyc04g049390.3 723 589 513 622 602 644 696 599 524 624 565 529 442 499 561 Protein kinase superfamily protein (AHRD V3.3 *-* A0A2U1MIH7_ARTAN) Solyc04g049400.3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *** A0A200QZ79_9MAGN) Solyc04g049403.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049407.1 79 88 123 104 82 96 87 71 79 53 98 65 108 115 123 Expressed protein (AHRD V3.3 *** AT5G49015.3) AT5G49015 Solyc04g049430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WPP domain associated protein (AHRD V3.3 *-* F4K8A5_ARATH) AT5G14990 Solyc04g150129.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049450.3 1646 2281 1875 1608 1647 1584 1730 1850 2454 2153 1849 2081 3785 2884 2049 Protein disulfide-isomerase (AHRD V3.3 *** A0A2G3AFP1_CAPAN) Solyc04g049460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Octanoyltransferase (AHRD V3.3 *** A0A2G3AER8_CAPAN) Solyc04g049470.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H3 (AHRD V3.3 *** A0A078CWM8_BRANA) Solyc04g049480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g150130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049490.3 2186 2731 3115 2890 2934 2774 2938 2615 2535 2146 2632 2180 3396 3154 3094 Vacuolar protein sorting-associated protein 53 A (AHRD V3.3 *** A0A2G3AN71_CAPAN) AT1G50500 Solyc04g049495.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0W1C2_9ASPA) Solyc04g049530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase (AHRD V3.3 *-* A0A2T4AXQ1_9HYPO) Solyc04g049540.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase APG (AHRD V3.3 *-* A0A2G2WRC2_CAPBA) Solyc04g049550.3 421 553 495 678 651 640 615 700 552 632 516 648 617 630 431 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (AHRD V3.3 *** B6TWM7_MAIZE) AT2G39290 Solyc04g049620.2 238 163 126 136 105 118 165 84 109 159 143 97 179 150 193 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4JT13_ARATH) Solyc04g049625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049630.3 726 710 507 633 595 633 678 747 609 578 481 573 587 642 811 Peptidase S9 (AHRD V3.3 *** A0A200PNL2_9MAGN) AT5G36210 Solyc04g049640.3 4 2 3 0 6 0 1 0 4 0 12 13 0 9 7 Protein kinase-like protein (AHRD V3.3 *-* B6ZA72_HELAN) Solyc04g049660.3 261 407 260 191 288 286 266 309 224 231 214 262 373 336 205 hypothetical protein (AHRD V3.3 *-* AT1G71430.1) AT1G71430 Solyc04g049670.4 5936 5053 7768 6060 5039 6120 6492 4286 7960 5603 8119 6703 6638 7598 8769 Pseudo-response regulator (AHRD V3.3 *** X5I0R0_IPONI) AT5G02810 Solyc04g049680.2 325 338 344 351 384 340 360 441 610 550 220 535 364 516 354 Pseudo-response regulator (AHRD V3.3 *-* X5I0R0_IPONI) Solyc04g049690.3 1120 946 1530 1457 1357 1613 1568 1176 1059 1182 1439 1168 1044 1272 1327 Adenylate kinase (AHRD V3.3 *** A0A2G2VGH6_CAPBA),Pfam:PF00406 AT2G39270 Solyc04g049710.3 1101 954 924 669 949 788 699 937 1182 855 1032 1138 1049 940 900 Protein TONNEAU 1b (AHRD V3.3 *** A0A1U8GVY3_CAPAN) AT3G55000 Solyc04g049720.4 417 541 564 803 742 659 699 754 666 784 528 803 519 689 419 Leukotriene A-4 hydrolase-like protein (AHRD V3.3 *** A0A1U8ELP4_CAPAN) AT5G13520 Solyc04g049740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-RELATED transcription factor (AHRD V3.3 *-* F1DJU8_MAIZE) Solyc04g049750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049770.4 1974 1531 1601 1496 1205 1559 1582 1481 1768 1338 1566 1372 1260 1457 1752 Regulator of nonsense transcripts UPF2 (AHRD V3.3 *** A0A2G2VPN6_CAPBA) AT2G39260 Solyc04g049773.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049777.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3INL5_COCAP) Solyc04g049780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049790.3 220 151 182 190 150 138 133 159 145 211 130 119 241 155 170 Membrane steroid-binding protein 2 (AHRD V3.3 *** A0A2G2ZS37_CAPAN) Solyc04g049795.1 12 10 8 9 17 14 18 10 5 11 23 16 6 3 31 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3CVA8_CEPFO) Solyc04g049800.3 275 196 266 386 262 298 277 256 126 104 280 103 275 216 453 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A220QTH6_9SOLA) Solyc04g150131.1 0 0 0 0 3 0 0 2 2 0 5 3 0 3 4 Cytochrome (AHRD V3.3 *-* A0A2G3B230_CAPCH) Solyc04g049807.1 5 1 0 0 5 0 3 0 5 0 0 0 3 1 0 Cytochrome (AHRD V3.3 *-* A0A1U8F588_CAPAN) Solyc04g049840.4 1018 1058 1091 1168 1383 1500 1575 1305 992 1069 1256 1271 1011 1297 1462 RNA binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* Q9M1E4_ARATH) Solyc04g049850.3 632 521 509 575 531 442 504 571 424 637 444 586 569 547 443 Sporulation protein RMD1 (AHRD V3.3 *** A0A2K3P3E7_TRIPR) AT5G13610 Solyc04g049860.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *-* AT5G13620.1) AT1G49290 Solyc04g049870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *** A0A0C5B9X0_9SOLA) Solyc04g049873.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049875.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cysteine-rich RECEPTOR-like kinase (AHRD V3.3 --* AT4G23160.3) Solyc04g049877.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0W1C2_9ASPA) Solyc04g049890.4 187 132 121 164 120 151 142 129 126 155 139 136 139 124 131 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (AHRD V3.3 *** Q8VZN6_ARATH) AT3G54970 Solyc04g049893.1 8 0 3 4 0 7 5 7 2 1 0 5 3 2 2 ATP-citrate synthase beta chain protein 1 (AHRD V3.3 *-* A0A2G3CHP1_CAPCH) Solyc04g049897.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g049910.4 464 385 436 476 362 353 374 282 316 318 382 379 424 393 439 Nuclear transcription factor Y subunit B-8 (AHRD V3.3 *** A0A2G2VG97_CAPBA) Solyc04g049920.4 46 304 415 206 905 815 1009 1264 100 152 148 272 47 114 66 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A2U1QNE1_ARTAN) AT3G54770 Solyc04g049925.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polyprotein (AHRD V3.3 *-* Q9ZS84_SOLLC) Solyc04g049930.2 504 670 448 321 638 570 612 889 938 535 446 634 516 674 490 Unknown protein Solyc04g049940.2 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 Unknown protein Solyc04g049950.1 2009 1892 1973 1815 1827 2304 2288 1929 2019 1642 2037 2027 2032 2183 1853 PWWP domain-containing protein (AHRD V3.3 *-* A0A1Q3BQN1_CEPFO) Solyc04g049960.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Low temperature and salt responsive protein family (AHRD V3.3 *** A0A2U1QNE0_ARTAN) AT2G38905 Solyc04g049970.4 207 313 470 392 357 506 493 397 296 254 354 340 316 333 391 complex 1 protein%2C LYR family protein (AHRD V3.3 *** AT5G51960.2) AT5G51960 Solyc04g049980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3CB55_CAPCH) Solyc04g049990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc04g050000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 73 Solyc04g050010.2 8 2 25 4 0 3 4 2 2 9 0 3 5 0 1 LOB domain-containing protein (AHRD V3.3 *** A0A2K3PP50_TRIPR) AT2G28500 Solyc04g050015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb/SANT-like domain-containing protein (AHRD V3.3 *-* A0A2U1KPB0_ARTAN) Solyc04g050040.3 1044 874 727 690 702 825 823 812 759 950 782 783 730 724 789 Mitochondrial substrate carrier family protein (AHRD V3.3 *** Q8VZP7_ARATH) AT2G35800 Solyc04g050050.3 123 191 237 214 364 316 302 320 330 138 273 232 142 245 226 SUN-like protein 13 AT3G52290 Solyc04g050060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein PHR1-LIKE 1 (AHRD V3.3 *** A0A2G3CIW3_CAPCH) Solyc04g050080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-RELATED transcription factor (AHRD V3.3 *-* F1DJU8_MAIZE),Pfam:PF13921 Solyc04g050090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-RELATED transcription factor (AHRD V3.3 *-* F1DJU8_MAIZE) Solyc04g050100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-RELATED transcription factor (AHRD V3.3 *-* F1DJU8_MAIZE) Solyc04g050130.1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* F4I5P7_ARATH) Solyc04g050140.3 390 221 328 270 255 218 225 198 322 295 470 228 218 325 302 Vacuolar sorting-associated protein (DUF946) (AHRD V3.3 *** A0A1I9LTD2_ARATH) AT3G04350 Solyc04g050150.4 820 832 924 786 735 765 829 851 945 712 920 895 888 965 729 RNA helicase DEAH-box13 AT1G08600 Solyc04g050160.4 38 45 17 33 32 23 29 71 86 55 49 56 25 54 11 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* AT1G08600.4) Solyc04g050170.4 31 183 139 155 322 306 334 316 296 123 221 169 100 100 315 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A061F8K0_THECC) AT1G08590 Solyc04g050175.1 2 0 0 1 0 0 2 0 2 0 0 1 0 2 11 Unknown protein Solyc04g050180.3 222 242 374 314 275 342 368 263 188 191 308 253 253 278 356 Unknown protein Solyc04g050190.4 566 654 489 585 426 511 558 627 600 554 460 602 521 590 516 Heme oxygenase-like, multi-helical, HAD-like domain protein (AHRD V3.3 *** A0A2U1LGJ5_ARTAN) AT5G32470 Solyc04g050200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF793 domain-containing protein (AHRD V3.3 *** A0A1Q3CD23_CEPFO) Solyc04g050205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-binding WRKY (AHRD V3.3 *-* A0A2U1LU31_ARTAN) Solyc04g050210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 69 Solyc04g050220.2 24 12 26 32 42 26 22 24 28 7 62 10 15 23 32 Unknown protein Solyc04g150132.1 232 106 154 220 84 107 131 70 114 174 310 101 163 187 370 Unknown protein Solyc04g050240.3 963 1051 1179 1170 1166 1135 1150 1209 1118 1114 1121 1066 1255 1104 956 Vacuolar protein sorting-associated protein 26B (AHRD V3.3 *** A0A2G2Y850_CAPAN) AT5G53530 Solyc04g150133.1 276 139 138 130 121 129 87 80 88 163 185 138 119 138 165 Unknown protein Solyc04g050250.1 111 42 65 47 31 25 28 47 56 46 28 36 28 42 35 Unknown protein Solyc04g050260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lung seven transmembrane receptor family protein (AHRD V3.3 *** A0A2U1P555_ARTAN) Solyc04g050270.1 211 138 231 200 212 217 222 166 195 140 260 157 160 162 221 transmembrane protein (AHRD V3.3 *-* AT3G04310.2) Solyc04g050300.1 0 0 0 0 0 2 0 1 2 0 4 0 0 1 0 Unknown protein Solyc04g150134.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Indole-3-acetaldehyde oxidase (AHRD V3.3 *-* A0A2G2VPI3_CAPBA) Solyc04g050310.3 124 121 156 139 157 117 127 155 154 145 117 135 103 125 107 Unknown protein Solyc04g050320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein l12-like (AHRD V3.3 *** A0A2K3K598_TRIPR) Solyc04g050340.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L12 (AHRD V3.3 *-* Q6RJY1_CAPAN) Solyc04g150135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L12 (AHRD V3.3 *-* Q6RJY1_CAPAN) Solyc04g050360.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L12 (AHRD V3.3 *-* Q6RJY1_CAPAN) Solyc04g050365.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 60S ribosomal protein L12-like (AHRD V3.3 *** XP_025886254.1) Solyc04g050370.1 0 2 2 0 0 1 1 0 0 1 0 1 0 3 0 60S ribosomal protein L12 (AHRD V3.3 *** A0A2I4EJH6_9ROSI) Solyc04g050380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) Solyc04g050390.3 1 0 0 0 1 0 0 0 1 1 2 0 1 2 1 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) Solyc04g050400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) Solyc04g050403.1 0 1 0 0 1 1 0 0 1 0 0 3 0 2 0 60S ribosomal protein L12 (AHRD V3.3 *-* A0A2I4EJH6_9ROSI) Solyc04g050407.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein l12-like (AHRD V3.3 *** A0A2K3K598_TRIPR) Solyc04g050430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) Solyc04g050440.3 74 273 123 325 180 125 132 72 111 68 16 73 195 137 85 ammonium transporter AT1G64780 Solyc04g050445.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-citrate synthase beta chain protein 1 (AHRD V3.3 *-* A0A2G2WTV4_CAPBA) Solyc04g050470.4 569 396 373 674 585 433 470 394 430 539 374 408 374 339 442 Ammonium transporter (AHRD V3.3 *** A0A2K3LM80_TRIPR) AT5G37360 Solyc04g050480.4 362 592 574 552 588 536 588 571 485 403 430 559 661 577 534 Exosome complex component CSL4 (AHRD V3.3 *** A0A200PVM8_9MAGN) AT5G38890 Solyc04g050490.4 384 326 434 373 363 407 350 306 340 244 306 334 270 337 173 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3BPI9_CEPFO) AT5G18460 Solyc04g050495.1 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4DNF9_9ROSI) Solyc04g050510.3 2379 2835 2014 1794 2039 1940 2170 2142 2066 1689 1453 1842 2670 2479 2117 Translational activator GCN1-like protein (AHRD V3.3 *** A0A2K3NKW4_TRIPR) Solyc04g050520.3 438 702 268 322 498 362 356 679 701 459 213 404 305 594 263 Translational activator GCN1 (AHRD V3.3 *** A0A1J3GIF2_NOCCA) Solyc04g050540.4 597 596 464 394 346 396 373 412 524 314 354 376 412 531 456 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PLV2_9MAGN) AT3G04260 Solyc04g050545.1 86 87 45 64 53 44 71 80 83 56 33 62 15 92 53 Unknown protein Solyc04g050550.3 177 130 100 105 125 98 108 136 140 114 53 123 89 124 96 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3B9N8_CAPCH) AT5G38730 Solyc04g050560.4 258 138 245 175 187 182 206 100 168 119 241 153 151 179 391 Glutathione S-transferase (AHRD V3.3 *-* A0A200QUC6_9MAGN) Solyc04g050570.3 82 327 239 252 475 590 455 517 394 214 409 366 118 139 49 GDSL esterase/lipase (AHRD V3.3 *** A0A1U8GR17_CAPAN) Solyc04g050573.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VHP9_9ASPA) ATMG00810 Solyc04g050575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G2Y725_CAPAN) Solyc04g050577.1 3 8 4 2 0 3 5 2 1 4 0 2 0 4 4 Unknown protein Solyc04g050620.3 308 188 354 246 87 77 110 51 1055 685 876 720 800 716 1099 Cytochrome (AHRD V3.3 *** A0A2G2Y725_CAPAN) Solyc04g050623.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein AT2G03955 Solyc04g050625.1 3 8 35 56 26 33 34 13 277 79 48 140 87 69 227 Cytochrome (AHRD V3.3 *** A0A1U8F588_CAPAN) Solyc04g050622.1 0 0 0 0 0 0 0 0 21 4 8 5 3 0 2 Cytochrome (AHRD V3.3 *-* A0A2G3B230_CAPCH) AT5G35920 Solyc04g050627.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc04g050670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene cyclase/mutase family member (AHRD V3.3 *-* A0A2G2WYN7_CAPBA) Solyc04g050675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3LWA1_TRIPR) Solyc04g050680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050685.1 0 0 0 2 0 0 0 0 0 1 0 0 1 0 10 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc04g050700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Inosine-uridine preferring nucleoside hydrolase family protein (AHRD V3.3 *-* A0A2U1LEG5_ARTAN) Solyc04g050710.1 12 0 5 1 2 6 1 7 2 2 0 4 0 2 1 Unknown protein Solyc04g050720.4 257 194 201 111 123 161 120 136 153 177 177 152 135 224 152 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* B3H578_ARATH) AT1G43770 Solyc04g050730.3 239 1050 748 1383 416 386 296 259 1511 564 939 817 590 810 867 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6PKD3_ACTCH) AT5G33370 Solyc04g050740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc04g050750.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A1U8HMX9_CAPAN) Solyc04g050755.1 3 1 1 16 0 15 2 2 6 7 14 6 5 7 28 Unknown protein Solyc04g050760.4 632 450 426 475 396 371 448 416 489 643 330 478 420 440 407 U11/U12 small nuclear ribonucleoprotein 48 kDa protein (AHRD V3.3 *** A0A1J3D887_NOCCA) AT3G04160 Solyc04g050770.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VG79_CAPBA) AT3G07360 Solyc04g050780.2 3 2 9 8 12 16 13 4 30 18 27 13 23 14 5 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VG79_CAPBA) AT3G07360 Solyc04g050790.3 79 164 188 194 167 175 103 160 173 89 112 182 87 153 121 ubiquitin hydrolase (AHRD V3.3 *** AT5G18310.2) AT5G18310 Solyc04g050795.1 4 0 1 6 3 1 0 4 0 0 0 0 3 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3K694_NOCCA) Solyc04g050820.3 291 257 291 385 324 302 339 229 238 187 274 194 225 259 380 Myo-inositol-1-phosphate synthase (AHRD V3.3 *** Q2MJR4_SOYBN) Solyc04g050822.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050824.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050826.1 1 6 4 3 6 0 4 0 7 6 0 4 2 8 0 Unknown protein Solyc04g050828.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* YCF2_IPOPU) Solyc04g050850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc04g050860.3 157 78 89 66 5 7 20 4 27 51 71 40 40 73 123 Myo-inositol-1-phosphate synthase (AHRD V3.3 *** Q2MJR3_SOYBN) Solyc04g050863.1 106 47 17 46 5 15 9 1 17 30 28 46 42 34 27 Disease resistance protein (AHRD V3.3 *-* A0A2U1NYN9_ARTAN) Solyc04g050865.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MX29_TRIPR) Solyc04g050867.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Unknown protein Solyc04g050890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *-* AT3G54310.1) Solyc04g150136.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *-* AT2G38430.1) Solyc04g050920.3 1589 1105 1190 983 923 903 886 918 991 1121 1165 983 1372 1011 1309 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *** AT3G54310.1) AT2G38430 Solyc04g050930.3 147 342 453 285 298 311 346 376 616 284 454 364 263 386 465 violaxanthin de-epoxidase AT1G08550 Solyc04g050933.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like kinase TMK4 (AHRD V3.3 *-* A0A199UXV5_ANACO) Solyc04g150137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *-* A0A200Q5G0_9MAGN) Solyc04g050937.1 0 1 0 1 0 4 2 3 1 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *** A0A200Q5G0_9MAGN) Solyc04g050950.3 6 18 8 5 26 33 34 15 10 7 4 13 10 3 0 Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN) Solyc04g050955.1 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VDL0_9ASPA) ATMG00810 Solyc04g050960.3 2399 1285 1220 1237 1292 1263 1088 1257 1387 1731 1148 1605 973 1116 839 Chromatin remodeling 4 (AHRD V3.3 *-* A0A2U1P2F6_ARTAN) Solyc04g050970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase (AHRD V3.3 *** E5GBV1_CUCME) AT3G02810 Solyc04g050980.1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g050990.3 62 111 80 108 95 107 115 90 95 77 76 110 188 79 190 F-box domain, Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1PQ05_ARTAN) AT2G02240 Solyc04g051020.2 6 13 2 5 11 12 7 7 5 6 2 7 6 0 4 Ribosomal L18p/L5e family protein (AHRD V3.3 *** F4HXR7_ARATH) Solyc04g051030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal L18p/L5e family protein (AHRD V3.3 *** F4HXR7_ARATH) Solyc04g051040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TGACG-sequence-specific DNA-binding protein TGA-1B (AHRD V3.3 *-* A0A1U8EJ74_CAPAN) Solyc04g150138.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TGACG-sequence-specific DNA-binding protein TGA-1B (AHRD V3.3 *-* A0A2G3BIB7_CAPCH) Solyc04g051070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051080.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* A0A1I9LLF2_ARATH) Solyc04g051090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BAG family molecular chaperone regulator 5, mitochondrial (AHRD V3.3 --* A0A2G2W3U0_CAPBA) Solyc04g051095.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051100.3 185 135 123 117 106 83 72 73 112 144 118 109 144 110 85 Unknown protein Solyc04g051120.4 456 582 503 486 447 566 555 573 547 519 416 515 492 562 495 chitinase-like protein (AHRD V3.3 *** AT1G08530.1) AT1G08530 Solyc04g051140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phospholipase D (AHRD V3.3 *-* K4B675_SOLLC) Solyc04g051150.3 76 50 117 75 40 47 35 30 38 75 132 38 75 56 235 Sterol 3-beta-glucosyltransferase (AHRD V3.3 *** A0A2K3NV48_TRIPR) AT3G07020 Solyc04g051155.1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb/SANT-like domain-containing protein (AHRD V3.3 *-* A0A2U1P375_ARTAN) Solyc04g051160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sugar/inositol transporter (AHRD V3.3 *** A0A200QQ41_9MAGN) Solyc04g051170.1 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** O82168_ARATH) Solyc04g051180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar iron transporter-like protein (AHRD V3.3 *** A0A2K3NGY4_TRIPR) Solyc04g051183.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Unknown protein Solyc04g051187.1 2 0 0 0 0 0 0 0 0 1 0 0 0 0 1 Histone-lysine N-methyltransferase ASHR2 (AHRD V3.3 *-* A0A1U8G5V4_CAPAN) Solyc04g051190.3 337 444 464 460 485 437 473 436 573 419 453 307 534 542 557 CYP97A29 AT1G31800 Solyc04g051200.2 1495 1484 1532 1137 1215 980 1011 1298 1239 1669 1191 1269 1680 1341 1090 Alpha-1,4-glucan-protein synthase (AHRD V3.3 *** A0A2K3PGD6_TRIPR) AT5G16510 Solyc04g150139.1 98 129 124 103 112 98 104 125 147 179 111 120 109 113 65 UDP-arabinopyranose mutase (AHRD V3.3 *** AT4G30390.1) AT4G30390 Solyc04g051220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc04g051230.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like (AHRD V3.3 *-* A0A2I4FG52_9ROSI) Solyc04g051235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051240.1 49 23 9 31 17 19 7 8 6 22 12 3 5 10 13 Unknown protein Solyc04g051241.1 22 19 0 11 3 9 27 16 12 17 26 16 8 24 29 Unknown protein Solyc04g051242.1 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 Serine/threonine-protein kinase CTR1-like protein (AHRD V3.3 *-* A0A2K3NHU2_TRIPR) Solyc04g051244.1 26 32 27 49 24 45 33 20 27 1 26 8 18 37 72 Cytochrome 71A1 (AHRD V3.3 *** A0A2G2WYP2_CAPBA) Solyc04g051246.1 18 16 10 27 6 20 7 53 18 3 15 11 12 7 15 Cytochrome P450 (AHRD V3.3 *-* A0A2U1KSJ9_ARTAN) Solyc04g051248.1 2 2 0 0 0 0 3 0 0 2 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc04g051270.2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 CASP-like protein (AHRD V3.3 *** A0A2K3NJJ6_TRIPR) Solyc04g051275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** ATMG01130.1) ATMG01130 Solyc04g051280.4 2149 872 1123 608 436 767 622 463 796 453 1212 731 722 1144 1884 nucleolin (AHRD V3.3 *-* AT1G65090.3) AT1G65090 Solyc04g051290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Unknown protein Solyc04g051293.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H domain (AHRD V3.3 *-* A0A200Q969_9MAGN) Solyc04g051295.1 0 0 0 1 6 6 13 8 0 2 0 4 0 1 1 Unknown protein Solyc04g051297.1 0 3 0 0 0 3 2 1 0 0 0 0 2 0 0 Unknown protein Solyc04g051310.4 1422 1663 1855 1569 1621 1608 1727 1635 1695 1690 1668 1570 1612 1612 1783 transmembrane protein (AHRD V3.3 *** AT5G16520.1) AT5G16520 Solyc04g051320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Geraniol 8-hydroxylase (AHRD V3.3 *-* A0A2G2Y249_CAPAN) Solyc04g051330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051340.3 1041 973 1170 824 735 787 756 779 899 1008 983 928 1067 999 777 Protein LIKE COV 2 (AHRD V3.3 *** A0A2G2Y741_CAPAN) Solyc04g051350.3 521 1078 874 968 1086 1043 1138 1097 1096 882 625 1234 880 1218 463 Ribonucleoside-diphosphate reductase (AHRD V3.3 *** A0A2G3BE96_CAPCH) AT2G21790 Solyc04g051360.3 2 17 40 2 0 0 0 0 7 3 296 1 0 0 12 Ethylene Response Factor D.1 Solyc04g051370.4 11728 9962 12371 10722 11826 11398 11433 9060 6674 7909 11258 7594 11991 10074 9887 26S proteasome non-ATPase regulatory subunit 12-like protein (AHRD V3.3 *** A0A2K3MWS1_TRIPR) AT5G64760 Solyc04g051380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-acyltransferase (AHRD V3.3 *-* A0A2G2Y752_CAPAN) Solyc04g051390.2 10 17 8 8 18 17 19 8 16 5 14 2 20 38 17 Unknown protein Solyc04g051400.2 9 15 10 13 1 2 3 4 7 8 0 4 8 3 5 Ubiquitin carboxyl-terminal hydrolase 27 (AHRD V3.3 *-* A0A2G2VFQ7_CAPBA) Solyc04g051410.4 136 91 83 131 99 102 96 77 87 69 70 93 86 137 74 Ubiquitin carboxyl-terminal hydrolase 27 (AHRD V3.3 *** A0A2G2VFQ7_CAPBA) AT4G39370 Solyc04g051420.3 0 3 0 0 9 2 3 1 0 1 0 0 0 0 2 Unknown protein Solyc04g051427.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4EGG2_9ROSI) Solyc04g051440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051450.3 237 248 218 204 288 248 272 280 229 221 174 230 201 274 221 TSL-kinase interacting protein 1 (AHRD V3.3 *** A0A2I4GQN6_9ROSI) AT4G39380 Solyc04g051460.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1LLK8_ARTAN) Solyc04g051470.1 3 5 8 5 1 0 3 0 0 2 2 0 0 2 19 At4g09890 (AHRD V3.3 *** Q9T0E8_ARATH) AT4G09890 Solyc04g051475.1 4 26 24 39 18 46 37 38 8 8 16 28 14 28 27 Unknown protein Solyc04g051480.1 21 46 8 31 25 49 54 53 35 32 24 62 38 48 40 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PQ84_9MAGN) Solyc04g051490.3 67 200 204 195 311 386 410 281 188 246 230 314 378 259 146 Crossover junction endonuclease EME1B (AHRD V3.3 *** A0A2G2VFP4_CAPBA) AT2G22140 Solyc04g051500.3 554 751 782 851 574 504 492 468 935 615 619 550 701 779 1019 UDP-galactose transporter 2 (AHRD V3.3 *** A0A2G2VFQ5_CAPBA) AT4G39390 Solyc04g051510.1 4195 3228 2919 2665 3223 3508 3249 3600 4095 3544 3483 3427 2947 3149 3313 curl-3 AT4G39400 Solyc04g051540.3 148 181 406 336 359 362 276 356 204 225 328 290 197 243 392 WRKY transcription factor 13 AT4G39410 Solyc04g051570.4 1057 1072 1011 1160 964 1054 1101 975 1248 866 797 849 830 1088 978 spatacsin carboxy-terminus protein (AHRD V3.3 *** AT4G39420.2) AT4G39420 Solyc04g051580.4 614 652 634 596 669 649 653 693 662 590 502 767 566 642 516 (DB244) meloidogyne-induced giant cell protein AT4G39460 Solyc04g051590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A2G3B2K5_CAPCH) AT5G64790 Solyc04g051600.4 291 254 257 212 222 263 260 237 234 256 286 236 249 261 311 tRNA(His) guanylyltransferase 1 (AHRD V3.3 *** A0A1U8DYC8_CAPAN) AT2G31580 Solyc04g051610.3 162 166 177 141 112 168 144 118 135 115 92 100 119 82 204 Violaxanthin de-epoxidase-related protein (AHRD V3.3 *** A0A2U1KMC6_ARTAN) AT2G21860 Solyc04g051620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *** G5CV47_SOLLC) AT5G23960 Solyc04g051625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc04g051630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051640.3 31 27 11 17 13 11 24 10 34 43 34 26 18 22 48 Purple acid phosphatase (AHRD V3.3 *** A0A2G2Y7W1_CAPAN) Solyc04g051650.3 114 78 81 78 68 51 68 59 69 58 71 56 64 79 115 Purple acid phosphatase (AHRD V3.3 *** A0A2G2VG27_CAPBA) Solyc04g051660.3 359 591 531 584 459 364 412 410 479 382 351 610 850 941 509 protein SLOW GREEN 1, chloroplastic (AHRD V3.3 *** A0A2I4G7E6_9ROSI) AT4G39470 Solyc04g051670.3 2237 2276 1404 1246 1170 1118 1196 1313 1242 1105 1071 1154 2812 2141 1595 RNA cytidine acetyltransferase (AHRD V3.3 *** A0A2G2Y7A9_CAPAN) AT3G57940 Solyc04g051680.4 1 7 0 2 4 4 1 2 8 4 7 3 2 6 1 Ras GTPase (AHRD V3.3 *** K2SFN1_MACPH) Solyc04g051690.4 555 328 393 171 0 4 0 0 85 301 516 24 862 324 271 WRKY transcription factor 51 AT5G64810 Solyc04g051700.3 929 949 977 965 750 876 1071 885 656 805 1080 667 963 877 674 Small GTPase superfamily (AHRD V3.3 *** A0A200QCA8_9MAGN) AT5G64813 Solyc04g051710.2 335 427 655 639 707 772 666 612 477 326 523 651 629 579 509 thionin-like protein (AHRD V3.3 *** AT5G64816.4) AT5G64816 Solyc04g051720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051730.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1QH19_ARTAN) AT4G39490 Solyc04g051760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051765.1 0 0 0 2 0 0 0 0 1 2 0 0 0 0 0 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3D9Z8_CEPFO) Solyc04g051780.3 639 418 366 324 351 345 338 362 323 373 345 338 311 349 425 Programmed cell death protein 2-like (AHRD V3.3 *** A0A1J3FQK3_NOCCA) AT5G64830 Solyc04g051783.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051787.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g051800.3 4707 3602 1385 2609 3412 3287 3164 3209 2743 3424 1425 2375 2520 1677 1927 ABC transporter-like (AHRD V3.3 *** A0A200QC97_9MAGN) AT5G64840 Solyc04g051820.4 746 713 2944 823 907 875 1085 862 737 874 1141 709 872 773 750 sorbin/SH3 domain protein (AHRD V3.3 *** AT5G09960.3) Solyc04g051830.4 877 1121 818 770 936 908 1005 900 624 615 613 766 1129 922 1022 Developmentally-regulated GTP-binding protein 1 (AHRD V3.3 *** B6TI04_MAIZE) AT4G39520 Solyc04g051850.3 1613 998 1120 723 905 965 858 691 712 738 729 665 847 861 1127 hypothetical protein (AHRD V3.3 *-* AT1G30475.3) AT1G56200 Solyc04g051860.3 382 483 577 523 527 607 575 474 419 653 670 550 759 579 545 shikimate kinase precursor AT2G21940 Solyc04g051870.3 1745 712 472 915 542 644 693 713 545 1171 595 975 413 723 521 F-box/kelch-repeat protein SKIP6 (AHRD V3.3 *** A0A2G2WMU8_CAPBA) AT2G21950 Solyc04g051880.3 30 50 54 40 47 81 51 52 43 34 39 39 39 49 37 Mitochodrial transcription termination factor (AHRD V3.3 *-* A0A2U1MAL3_ARTAN) Solyc04g051885.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *** A0A2U1PDH8_ARTAN) Solyc04g052890.3 0 0 0 1 0 4 1 0 5 2 0 3 0 0 4 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G2Y5L8_CAPAN) AT1G29460 Solyc04g052910.3 0 0 0 3 0 2 0 0 4 1 0 0 0 0 0 Auxin-responsive protein SAUR65 (AHRD V3.3 *-* A0A2G2Y5L8_CAPAN) AT1G29460 Solyc04g052940.1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 skin secretory protein xP2-like (AHRD V3.3 *-* XP_019071199.1) Solyc04g052960.1 0 2 0 10 2 1 4 1 3 5 0 0 0 0 0 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G3B0T7_CAPCH) AT1G29460 Solyc04g052970.3 0 7 1 6 0 2 1 1 1 3 1 0 0 0 12 Auxin-responsive protein SAUR24 (AHRD V3.3 *** A0A1U8FJX4_CAPAN) AT2G21210 Solyc04g052980.1 0 5 1 8 2 3 0 4 6 11 0 0 0 3 3 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G2Y5L8_CAPAN) AT1G29460 Solyc04g052985.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR20 (AHRD V3.3 *-* A0A2G3AZX4_CAPCH) Solyc04g052990.1 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G2Y5L8_CAPAN) AT1G29460 Solyc04g053000.1 0 1 2 4 0 0 0 0 2 7 16 1 2 0 32 Auxin-responsive protein SAUR24 (AHRD V3.3 *** A0A1U8FJX4_CAPAN) AT2G21210 Solyc04g053010.1 2 21 3 23 0 9 1 3 7 17 16 2 15 3 23 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G2Y5L8_CAPAN) AT1G29460 Solyc04g053020.2 0 5 4 10 0 0 0 0 4 7 5 0 0 3 10 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G2Y5L8_CAPAN) AT1G29460 Solyc04g053030.1 0 3 0 15 0 4 0 0 3 0 0 0 0 0 10 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G3B0T7_CAPCH) AT1G29460 Solyc04g053033.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc04g053037.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g053040.3 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 Unknown protein Solyc04g053050.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** Q93VJ0_ARALY) Solyc04g150140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF1-related protein kinase regulatory subunit beta-3 (AHRD V3.3 *-* A0A2G3A5M6_CAPAN) Solyc04g053070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GRF zinc finger family protein (AHRD V3.3 --* Q2QWQ9_ORYSJ) Solyc04g053080.4 5231 2462 2232 1798 1380 1658 1304 1243 2337 1986 2499 1920 1768 2034 3125 Cysteine proteinases superfamily protein (AHRD V3.3 *** Q9LYC7_ARATH) AT3G62940 Solyc04g053090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook motif DNA-binding family protein (AHRD V3.3 *-* A0A2U1PYS7_ARTAN) Solyc04g053091.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook motif DNA-binding family protein (AHRD V3.3 *-* A0A2U1PYS7_ARTAN) Solyc04g150141.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g053094.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook motif DNA-binding family protein (AHRD V3.3 *-* AT2G33620.4) Solyc04g150142.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT-hook motif nuclear-localized protein 10 (AHRD V3.3 *-* B4FWG7_MAIZE) Solyc04g150143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g053100.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook, DNA-binding motif-containing protein (AHRD V3.3 *-* A0A2U1KK62_ARTAN) Solyc04g053102.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g053104.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook motif DNA-binding family protein (AHRD V3.3 *-* A0A2U1PYS7_ARTAN) Solyc04g053106.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT-hook motif nuclear-localized protein 10-like (AHRD V3.3 *** XP_025886281.1) Solyc04g053108.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook, DNA-binding motif-containing protein (AHRD V3.3 *-* A0A2U1KK62_ARTAN) Solyc04g053110.1 7 8 29 37 0 1 0 2 11 6 0 1 13 10 51 Monothiol glutaredoxin-s6 (AHRD V3.3 *** A0A314L0I0_NICAT) AT1G03020 Solyc04g053120.3 506 1136 849 1015 1580 1526 1770 1734 1522 725 1049 1090 458 801 986 4-alpha-glucanotransferase (AHRD V3.3 *** A0A1U8EWW1_CAPAN) AT5G64860 Solyc04g053130.4 2584 1322 970 1013 922 1057 813 740 947 1683 2189 1007 894 1019 2835 Stress enhanced protein 2, chloroplastic (AHRD V3.3 *** A0A1U8F0B2_CAPAN) AT2G21970 Solyc04g053140.3 32 12 8 20 15 29 14 16 7 34 46 64 3 12 5 protein MIZU-KUSSEI 1-like (AHRD V3.3 *** A0A2I4H215_9ROSI) Solyc04g053145.1 211 111 263 208 185 230 145 114 144 195 296 150 135 160 211 transmembrane protein (AHRD V3.3 --* AT5G64880.1) AT5G64880 Solyc04g053147.1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 3 Unknown protein Solyc04g054140.4 1515 1239 1372 1333 1087 1154 1284 1134 1316 1370 1429 1345 1367 1469 1394 E3 ubiquitin-protein ligase RKP (AHRD V3.3 *** A0A2G2VG74_CAPBA) AT2G22010 Solyc04g054143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g150144.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g054147.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g054150.2 58 43 27 81 5 2 2 3 23 17 69 24 81 114 149 Nuclear transcription factor Y subunit B-3 (AHRD V3.3 *** A0A2G3B250_CAPCH) Solyc04g054153.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3CXR1_CEPFO) Solyc04g150145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *-* A0A2U1LAT0_ARTAN) Solyc04g054170.4 969 699 712 656 618 679 621 484 546 569 627 588 766 794 663 Protein CPR-5 (AHRD V3.3 *** A0A2I0WW63_9ASPA) AT5G64930 Solyc04g054180.4 941 1736 1301 1228 1681 1702 1562 1866 1063 682 820 1193 1455 1557 1012 Serine/Threonine-kinase (AHRD V3.3 *** AT5G64910.5) AT5G10010 Solyc04g054190.3 2789 2337 738 1751 2693 2883 2972 2847 1939 2338 696 1629 1693 854 763 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1MTH5_ARTAN) AT5G64940 Solyc04g054195.1 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g054200.3 747 830 936 1042 824 1098 1149 952 768 729 990 966 768 877 913 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A0K9PBC0_ZOSMR) AT5G10020 Solyc04g150146.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc04g054220.3 14 4 8 8 0 0 1 0 59 148 36 15 20 17 17 Cytochrome (AHRD V3.3 *** A0A2G2VG33_CAPBA) Solyc04g054223.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g150147.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VHP9_9ASPA) ATMG00810 Solyc04g054227.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PDV1_TRIPR) Solyc04g054250.4 0 4 2 2 0 0 0 0 14 9 0 0 4 4 1 Cytochrome (AHRD V3.3 *** A0A2G2Y725_CAPAN) Solyc04g054251.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MRX4_TRIPR) ATMG00240 Solyc04g054252.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) Solyc04g054254.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc04g054256.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 11 Cytochrome p450 (AHRD V3.3 *** A0A2K3NDQ9_TRIPR) Solyc04g054258.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome p450 (AHRD V3.3 *** A0A2K3NDQ9_TRIPR) Solyc04g054260.4 353 311 462 357 307 381 354 293 383 442 405 227 409 284 407 Cytochrome p450 (AHRD V3.3 *** A0A2K3NDQ9_TRIPR) Solyc04g054270.4 92 86 101 95 119 120 109 135 154 77 84 88 81 128 100 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PQB4_9MAGN) AT4G39620 Solyc04g054280.2 0 4 0 1 0 0 0 0 5 0 0 0 2 0 1 auxin-related IAA23 Solyc04g054290.3 22 25 21 26 17 14 13 21 30 22 19 26 13 44 30 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WLY5_CAPBA) AT2G22070 Solyc04g054300.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g054310.3 146 96 50 123 19 24 22 16 35 49 44 37 180 103 183 Alanine-glyoxylate aminotransferase 2 (AHRD V3.3 *** A0A2U1PRH4_ARTAN) AT4G39660 Solyc04g054320.4 291 115 187 170 145 192 166 155 113 152 183 116 192 189 206 leucine-zipper transcription factor Solyc04g054330.3 980 549 844 780 548 605 650 495 536 637 741 594 666 744 957 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NLT0_ARTAN) AT2G22120 Solyc04g054340.1 251 75 91 56 62 23 62 32 61 235 138 35 23 51 73 hypothetical protein (AHRD V3.3 -** AT5G65207.1) AT5G65207 Solyc04g054360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc04g054370.1 1254 869 526 1055 936 752 789 639 708 1356 1057 965 1025 1059 1359 RING/U-box superfamily protein (AHRD V3.3 *-* Q3EAE6_ARATH) AT3G43430 Solyc04g054380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *** G5CV47_SOLLC) AT5G23960 Solyc04g054400.3 192 205 151 234 289 204 195 221 194 206 154 190 244 237 122 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1NLW3_ARTAN) AT5G65205 Solyc04g054410.3 2182 2590 2059 2762 1796 1772 1864 1850 1507 1897 1874 2314 2404 2512 1886 regulation of nuclear pre-mRNA domain-containing protein 1A-like (AHRD V3.3 *** A0A2I4H3Y5_9ROSI) AT5G10060 Solyc04g054430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc04g054440.3 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT1G05490 Solyc04g054450.1 2 0 2 0 0 0 0 0 1 0 7 0 1 7 0 receptor-like protein 12 (AHRD V3.3 *** A0A1U8E178_CAPAN) AT3G05660 Solyc04g054460.3 260 555 590 478 801 746 645 724 614 442 537 674 724 660 424 glycine-rich protein (AHRD V3.3 *** AT3G59640.2) AT2G43630 Solyc04g054470.3 1555 2295 2333 2615 2434 3158 2782 2662 2298 1726 2179 2162 2539 2911 2676 Unknown protein Solyc04g150148.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 flocculation FLO11-like protein (AHRD V3.3 --* AT2G40070.1) Solyc04g054480.3 3741 4847 5145 5112 4996 4926 5639 5015 6327 5891 5660 4808 4619 4729 5806 U-box domain-containing protein (AHRD V3.3 *** A0A2K3NTR2_TRIPR) AT2G22125 Solyc04g054490.3 1541 1028 1415 1522 1278 1537 1748 1187 825 1186 1147 1107 1221 1307 1574 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1LT79_ARTAN) AT5G10080 Solyc04g054500.3 243 633 1468 752 1875 1986 2151 1543 894 412 1446 1267 267 982 1073 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6R672_ACTCH) AT4G39700 Solyc04g054510.4 247 509 667 444 468 422 505 313 230 173 467 328 663 532 636 DNA-directed RNA polymerase subunit (AHRD V3.3 *** A0A1U8ETV9_CAPAN) AT3G25940 Solyc04g054520.3 154 193 286 312 248 248 251 236 247 167 294 240 195 217 204 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G3B2P5_CAPCH) AT4G39710 Solyc04g054521.1 0 0 0 0 5 0 3 1 0 0 0 0 0 0 0 Unknown protein Solyc04g054522.1 0 0 1 0 0 6 2 1 0 0 0 0 0 0 0 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 --* XP_021635953.1) Solyc04g054523.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g054524.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor 56-like (AHRD V3.3 *** XP_019069043.2) Solyc04g054525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor, MADS-box (AHRD V3.3 *-* A0A2U1Q810_ARTAN) AT2G26320 Solyc04g054526.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GATA zinc finger domain-containing protein 15-like (AHRD V3.3 *** XP_025886282.1) Solyc04g054527.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A2PZF4_ALSLI) Solyc04g054528.1 0 1 0 0 3 0 1 0 3 1 0 5 2 2 0 Unknown protein Solyc04g054529.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PNF5_TRIPR) ATMG00240 Solyc04g054530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GATA zinc finger domain-containing protein 15-like (AHRD V3.3 *** XP_025886282.1) Solyc04g054533.1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A2PZF5_ALSLI) Solyc04g054535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 floral homeotic protein APETALA 1 C-like (AHRD V3.3 *-* XP_025886284.1) Solyc04g054537.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor 50-like (AHRD V3.3 *** XP_025886283.1) Solyc04g054680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PM96_ARTAN) Solyc04g054682.1 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 MADS-box transcription factor 50-like (AHRD V3.3 *** XP_025886283.1) Solyc04g054684.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor, MADS-box (AHRD V3.3 *-* A0A2U1Q5V5_ARTAN) AT2G26320 Solyc04g054686.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 floral homeotic protein APETALA 1 C-like (AHRD V3.3 *** XP_025886284.1) Solyc04g054688.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A0A0S3PND8_9LILI) AT2G26320 Solyc04g054690.3 534 87 231 72 95 95 84 80 61 43 310 103 141 309 193 ascorbate oxidase AT4G39830 Solyc04g054700.3 531 440 537 522 461 634 498 484 539 478 629 532 500 563 643 General transcription factor IIH subunit (AHRD V3.3 *** A0A2G2XQE2_CAPBA) AT1G05055 Solyc04g054710.3 1750 2426 2243 2420 2876 2555 2381 3140 3092 2869 1895 3152 3199 2903 2143 Aminotransferase (AHRD V3.3 *** A0A200QW13_9MAGN) AT2G22250 Solyc04g054720.4 7 10 45 7 19 9 6 3 17 23 11 9 1 15 20 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1LS20_ARTAN) AT4G39810 Solyc04g054725.1 0 2 4 5 0 1 1 0 0 0 4 0 0 0 14 Unknown protein Solyc04g054730.3 641 336 1184 1306 253 246 300 162 124 247 646 59 232 282 1268 Sulfate transporter-like protein (AHRD V3.3 *** A0A2K3NYV6_TRIPR) Solyc04g054735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc04g054740.3 6782 7035 3178 6284 3781 3200 3319 2820 6320 5316 4605 4053 5821 2122 5250 myo-inositol-1-phosphate synthase AT5G10170 Solyc04g150150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 --* XP_003551216.2) Solyc04g054760.3 41 63 23 40 37 18 39 23 46 61 45 33 34 38 144 FCS-Like Zinc finger 5 (AHRD V3.3 *** FLZ5_ARATH) Solyc04g054770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g054780.3 74 41 27 70 40 40 52 64 32 49 63 51 47 43 37 Unknown protein Solyc04g054790.2 40 49 87 43 46 43 50 54 40 80 33 79 34 58 12 UPSTREAM OF FLC protein (DUF966) (AHRD V3.3 *-* Q8GYT8_ARATH) Solyc04g054800.3 766 816 1949 1258 954 1174 795 837 753 1070 797 1391 365 1215 505 UPSTREAM OF FLC protein (DUF966) (AHRD V3.3 *** A0A1P8BC74_ARATH) Solyc04g054810.3 1862 6181 6507 5359 5900 5951 5997 6163 5145 5266 6862 5479 5983 5430 4887 Pollen Ole e 1 allergen/extensin (AHRD V3.3 *** A0A200QVY0_9MAGN),Pfam:PF01190 AT4G08685 Solyc04g054820.3 274 230 338 369 248 283 260 177 239 203 479 258 235 196 288 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (AHRD V3.3 *** A0A2G3B2N3_CAPCH) Solyc04g054830.4 3 0 8 0 0 3 1 2 1 0 5 0 0 2 13 Type I inositol polyphosphate 5-phosphatase 5 (AHRD V3.3 *-* A0A199V5W7_ANACO) AT5G65090 Solyc04g054840.1 0 4 0 0 5 7 11 4 2 0 18 4 1 0 0 Ethylene insensitive 3-like protein (AHRD V3.3 *-* G0Y289_ONCHC) AT5G10120 Solyc04g054850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g054855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc04g054860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein ROS1 (AHRD V3.3 *-* A0A2G2Y7I1_CAPAN) Solyc04g054865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LF16_TRIPR) Solyc04g054870.1 0 0 0 0 0 0 0 0 1 1 0 4 0 0 0 Protein ROS1 (AHRD V3.3 *-* A0A2G3B2M6_CAPCH) Solyc04g054875.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein ROS1 (AHRD V3.3 *-* A0A2G2Y7I1_CAPAN) Solyc04g054880.3 1545 2211 2202 1939 3243 3251 3065 3584 1768 1853 1781 2776 1496 1853 1505 DUF632 domain-containing protein/DUF630 domain-containing protein (AHRD V3.3 *** A0A1Q3C1I5_CEPFO) AT4G39790 Solyc04g054890.3 1019 369 279 343 449 517 487 557 351 521 219 296 405 339 264 Acyl-coenzyme A oxidase (AHRD V3.3 *** A0A1U8F2S5_CAPAN) AT5G65110 Solyc04g054895.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g054900.3 112 328 370 301 419 389 364 337 336 136 247 310 273 466 294 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** Q8VZV8_ARATH) AT5G65120 Solyc04g054910.4 12627 8538 13300 10928 5771 6253 5253 4251 8215 6001 14779 6049 10342 8881 18991 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2ZQC4_CAPAN) Solyc04g054915.1 1 0 0 2 2 1 0 3 1 2 0 0 3 0 13 mucin-2-like (AHRD V3.3 --* XP_021853839.1) Solyc04g054930.3 1060 524 352 592 458 274 261 368 693 1826 594 1005 636 340 421 Trehalose 6-phosphate phosphatase (AHRD V3.3 *** A0A2G3B2U1_CAPCH) AT5G65140 Solyc04g054950.3 26 18 30 24 3 10 1 1 20 32 50 29 4 20 16 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IKL5_ARATH),Pfam:PF13561 Solyc04g054960.1 0 0 0 0 0 0 3 0 0 0 0 2 0 0 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q84VP8_ARATH) AT2G22180 Solyc04g054970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g054980.3 5304 5363 11922 9053 8015 7709 7784 6891 12668 8223 10815 9999 7380 7554 13141 PLAT/LH2 domain (AHRD V3.3 *** A0A200QB70_9MAGN) AT4G39730 Solyc04g055000.3 18 33 67 103 16 17 12 17 91 30 47 47 57 49 159 inactive TPR repeat-containing thioredoxin TTL3-like (AHRD V3.3 *** A0A2I4H3Y7_9ROSI) AT5G65160 Solyc04g055010.3 1368 1091 1033 1096 966 1018 1033 1030 998 1029 991 1033 751 952 842 Protein SCO1-like protein 2, mitochondrial (AHRD V3.3 *** A0A2G2VFW1_CAPBA) AT4G39740 Solyc04g055020.2 4 0 0 0 0 0 2 0 1 0 0 1 1 0 0 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (AHRD V3.3 *** A0A2G2XLC0_CAPBA) AT5G65165 Solyc04g055030.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (AHRD V3.3 *** A0A2G2XLC0_CAPBA) AT5G65165 Solyc04g055050.1 1097 597 486 733 316 265 201 197 196 391 464 288 463 553 717 VQ motif-containing protein (AHRD V3.3 *-* Q9C8B9_ARATH) Solyc04g055060.3 0 0 2 0 1 1 0 0 1 1 0 1 1 1 0 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 *-* XP_019066952.1) Solyc04g055080.3 24 25 33 16 11 18 7 10 11 17 46 12 17 12 49 Major facilitator superfamily (AHRD V3.3 *** A0A200QUR2_9MAGN) AT5G10190 Solyc04g055090.1 507 565 755 645 234 197 176 283 293 666 655 365 1017 492 452 cell wall integrity/stress response component-like protein (AHRD V3.3 *-* AT4G39840.1) Solyc04g055100.1 2 0 3 9 4 4 1 0 1 0 3 0 0 0 0 DUF1191 domain-containing protein (AHRD V3.3 *** A0A1Q3BAW9_CEPFO) Solyc04g055110.3 437 553 505 619 613 603 618 598 694 581 508 552 797 556 488 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein (AHRD V3.3 *** A0A2U1PVE7_ARTAN) AT5G10200 Solyc04g055120.3 2471 2121 1915 1941 1701 1706 1763 1835 2272 1940 1740 1777 1962 2142 1877 ABC transporter D family member 1 (AHRD V3.3 *** A0A2G2VGL8_CAPBA) AT4G39850 Solyc04g055130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 C2 calcium/lipid-binding domain, CaLB (AHRD V3.3 *-* A0A2U1PHW5_ARTAN) Solyc04g055140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 C2 calcium/lipid-binding domain, CaLB (AHRD V3.3 *-* A0A2U1PHW5_ARTAN) Solyc04g055150.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 C2 calcium/lipid-binding domain, CaLB (AHRD V3.3 *-* A0A2U1PHW5_ARTAN) Solyc04g055160.3 286 1212 1119 1275 1967 1888 1749 2080 1096 681 1313 1570 579 842 637 Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2 (AHRD V3.3 *** A0A2G2X511_CAPBA) AT4G39860 Solyc04g055170.3 2795 3078 3430 3086 3925 3063 3083 3838 4869 3411 2957 4025 3792 3658 3917 annexin p35 AT5G65020 Solyc04g055180.3 1217 755 689 712 538 497 602 544 622 882 546 715 806 684 630 (DB215) meloidogyne-induced giant cell protein AT4G39870 Solyc04g055190.4 377 459 669 660 716 740 720 699 567 479 620 641 552 581 652 Membrane bound O-acyl transferase, MBOAT (AHRD V3.3 *** A0A2U1N4P1_ARTAN) AT1G57600 Solyc04g055200.3 218 831 474 569 769 669 694 963 747 501 484 754 792 728 565 Asparagine synthetase (AHRD V3.3 *** Q8LJT6_STRHE) AT5G10240 Solyc04g055220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A2G3DAV0_CAPCH) Solyc04g055225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc04g055230.2 35 22 27 42 13 5 4 5 22 21 24 20 21 24 27 Cystathionine beta-lyase (AHRD V3.3 *-* A0A0M3VI47_MIMPU) Solyc04g055235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g055250.4 212 632 832 697 1006 977 904 1050 1086 446 573 793 483 636 287 adenine deaminase (AHRD V3.3 *** AT4G39900.1) AT4G39900 Solyc04g055253.1 10 143 76 154 103 95 85 89 250 97 220 269 68 122 24 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PMX3_ARTAN) AT5G04370 Solyc04g055255.1 0 2 0 0 0 0 0 0 0 4 9 11 0 1 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A2U1PMX3_ARTAN) Solyc04g055257.1 7 43 21 43 34 29 43 16 46 69 346 216 54 53 49 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PMX3_ARTAN) AT5G04370 Solyc04g056260.2 18 40 18 14 9 23 20 12 19 9 14 7 11 22 12 Mitochondrial substrate carrier family protein (AHRD V3.3 *** A0A1P8BDA7_ARATH) Solyc04g056270.4 2470 1998 1691 1489 964 1113 1004 1235 2275 2321 1761 1280 2056 1893 1473 ER66 Solyc04g056280.4 624 879 636 612 782 666 640 822 691 704 607 666 786 718 730 cyclin dependent kinase C Solyc04g056290.3 352 467 327 332 396 407 426 405 403 213 320 318 531 410 318 Ubiquitin carboxyl-terminal hydrolase 46 (AHRD V3.3 *** A0A1U8F3J0_CAPAN) AT4G39910 Solyc04g056310.3 9 8 0 0 0 0 0 0 0 0 0 0 7 0 9 MYB transcription factor (AHRD V3.3 *-* A0A0U3IU11_MESCR) AT5G65230 Solyc04g056320.3 1236 834 370 514 427 312 304 406 453 975 388 369 1500 663 635 Zinc finger, C2H2 (AHRD V3.3 *** A0A2U1PTD0_ARTAN) Solyc04g056330.1 118 267 242 143 340 271 261 367 208 151 134 255 214 141 138 AIG2-like (Avirulence induced gene) family protein (AHRD V3.3 *** Q9FIQ3_ARATH) AT5G46720 Solyc04g056340.4 319 237 390 314 401 373 382 418 206 312 436 200 262 354 258 Tyrosine phosphatase family protein (AHRD V3.3 *** A0A2U1PX48_ARTAN) AT3G02800 Solyc04g056350.1 1921 2398 1920 2131 1978 1548 1789 1645 2027 1718 1709 1655 3283 2623 2273 Zinc finger (C2H2 type) family protein (AHRD V3.3 *** A0A2U1L3F9_ARTAN) AT3G02790 Solyc04g056360.4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 36 Solyc04g056365.1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 WRKY transcription factor (AHRD V3.3 *-* A0A2K3N876_TRIPR) Solyc04g056370.3 171 198 328 223 273 215 183 184 248 142 280 242 392 364 429 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A1J3DTL1_NOCCA) AT1G04590 Solyc04g056380.3 58 29 12 20 24 33 27 25 27 46 44 49 25 20 40 seipin-1 (AHRD V3.3 *** A0A2I4DXK6_9ROSI) AT5G16460 Solyc04g056390.3 1076 960 1479 1336 1092 993 1136 951 1848 2126 3060 2487 1325 1409 1866 Isopentenyl-diphosphate Delta-isomerase (AHRD V3.3 *** A0A2L0V4K4_9APIA) AT5G16440 Solyc04g056410.3 220 493 600 635 658 894 853 766 498 349 425 741 473 659 301 Protein CHROMATIN REMODELING 25 (AHRD V3.3 *** A0A2G2WYM5_CAPBA) AT3G19210 Solyc04g056420.1 2 5 15 11 7 2 1 2 1 12 3 1 0 1 0 Peroxidase (AHRD V3.3 *** K4BSU0_SOLLC) Solyc04g056425.1 54 59 114 87 74 124 84 114 93 71 88 90 93 97 114 basic leucine zipper/W2 domain protein (AHRD V3.3 *-* AT1G06010.1) Solyc04g056440.3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V3.3 *-* A0A2U1QM01_ARTAN) Solyc04g056450.4 1 3 11 15 1 9 6 8 0 4 18 0 2 3 3 Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V3.3 *** A0A2U1QM01_ARTAN) Solyc04g056460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TGACG-sequence-specific DNA-binding protein TGA-1B (AHRD V3.3 *** A0A2G3BIB7_CAPCH) AT2G40950 Solyc04g056470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BZIP transcription factor 17 (AHRD V3.3 *-* A0A2G3D6L2_CAPCH) Solyc04g056480.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g056490.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TGACG-sequence-specific DNA-binding protein TGA-1B (AHRD V3.3 *-* A0A2G3BIB7_CAPCH) Solyc04g150151.1 9 21 20 10 0 6 14 0 25 8 8 43 3 57 22 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3KIY2_9ROSI) Solyc04g150152.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3KIY2_9ROSI) Solyc04g150153.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g150154.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *** A0A1R3JKV9_9ROSI) Solyc04g150155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosome biogenesis protein BMS1-like protein (AHRD V3.3 *-* A0A2G2W7A2_CAPBA) Solyc04g056500.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tubulin beta chain (AHRD V3.3 *-* A0A1U8EHY4_CAPAN) Solyc04g150156.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tubulin beta chain (AHRD V3.3 *-* A0A2I0VMK4_9ASPA) Solyc04g056510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BZIP transcription factor (AHRD V3.3 *-* A0A2K3NPR1_TRIPR) Solyc04g056520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g056525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosome biogenesis protein BMS1-like protein (AHRD V3.3 *-* A0A2G2W7A2_CAPBA) Solyc04g056530.2 130 135 138 173 123 184 142 119 122 106 141 148 191 169 157 Ribosomal L18p/L5e family protein (AHRD V3.3 *** F4HXR7_ARATH) AT1G08845 Solyc04g056535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A1P8BH39_ARATH) Solyc04g056540.3 303 507 561 477 481 490 570 446 408 371 440 448 437 488 464 Riboflavin biosynthesis protein RibD (AHRD V3.3 *** A0A1Y1HVZ2_KLENI) AT3G47390 Solyc04g056550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc04g056560.4 1021 1163 761 1240 1057 1425 1110 960 1013 826 1018 917 1122 1087 1135 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1QE45_ARTAN) Solyc04g056570.3 8 7 8 4 7 17 11 1 1 2 12 2 14 3 9 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2U1PW75_ARTAN) AT5G17680 Solyc04g056580.3 181 254 297 261 157 244 161 186 305 133 311 195 200 222 498 Transmembrane protein, putative (DUF2358) (AHRD V3.3 *** Q8L604_ARATH) AT1G65230 Solyc04g056590.3 346 337 368 402 307 256 304 334 336 322 372 304 267 363 320 Aspartic proteinase-like protein 2 (AHRD V3.3 *** A0A1J6IFA7_NICAT) Solyc04g056600.4 1276 975 1108 1166 962 1050 940 902 911 1229 1050 982 1043 1048 907 Na+/H+ antiporter 2 AT1G79610 Solyc04g056610.3 293 616 683 689 664 729 715 732 580 477 430 479 633 641 497 isopentenyl-diphosphate delta-isomerase (AHRD V3.3 *** AT5G55610.1) AT5G55610 Solyc04g056620.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Auxin Efflux Facilitator 10 Solyc04g056630.3 1138 976 846 1309 944 890 913 904 1068 1291 874 1009 1055 954 1414 CBS domain-containing protein CBSX6 (AHRD V3.3 *** A0A2G2Y846_CAPAN) AT1G65320 Solyc04g056640.1 191 291 478 417 552 573 491 536 390 391 360 447 405 337 404 Leucine rich receptor kinase (AHRD V3.3 *** A0A2P5AMX7_TREOI) AT1G65380 Solyc04g056650.4 422 351 407 369 318 390 389 351 348 387 368 418 437 386 415 ABC transporter ATP-binding protein (AHRD V3.3 *** A0A1A5X782_9BURK) AT1G65410 Solyc04g056660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g083140.2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc04g056680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2G3B4N2_CAPCH) Solyc04g056690.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A2G3B4N2_CAPCH) Solyc04g056700.1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance protein 1 (AHRD V3.3 *-* A0A2G3B4N1_CAPCH) Solyc04g056710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A2G3B4N2_CAPCH) Solyc04g056713.1 7 8 1 2 0 5 3 0 1 1 39 3 1 6 31 Aldehyde dehydrogenase family 2 member mitochondrial-like (AHRD V3.3 *-* A0A2K3PGY0_TRIPR) Solyc04g056717.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g056720.1 0 4 0 0 0 0 0 0 2 0 1 0 0 0 0 Unknown protein Solyc04g056723.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g056727.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VXM7_9ASPA) Solyc04g056730.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g056740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc04g150157.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 premnaspirodiene oxygenase-like (AHRD V3.3 --* XP_004228509.1) Solyc04g056747.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BAH domain-containing protein/Agenet domain-containing protein (AHRD V3.3 *-* A0A1Q3AW16_CEPFO) Solyc04g057780.4 144 65 93 110 61 59 69 37 61 72 78 59 63 60 95 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A1U8EZC2_CAPAN) Solyc04g057790.1 60 91 122 84 176 154 167 116 87 52 139 94 79 84 139 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *-* A0A2U1Q290_ARTAN) Solyc04g083150.2 205 180 168 166 347 251 223 315 214 215 158 223 181 199 175 Cytochrome p450 (AHRD V3.3 *** A0A2K3NDQ9_TRIPR) Solyc04g057820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g057830.1 4 6 20 5 0 0 0 0 3 1 26 3 7 8 13 DUF4228 domain-containing protein (AHRD V3.3 *** A0A1Q3B2B9_CEPFO) AT5G12340 Solyc04g057840.1 1 2 0 6 0 1 0 0 0 0 0 0 0 0 0 Pvr4 (AHRD V3.3 *-* A0A1D5AHY8_CAPAN) Solyc04g057850.1 22 15 6 9 13 16 25 11 13 11 4 16 6 10 11 NB-ARC domains-containing protein (AHRD V3.3 *-* A0A2U1N7D5_ARTAN) Solyc04g057860.3 62 57 75 54 87 131 104 117 58 35 48 108 32 66 17 60S ribosomal protein L27 (AHRD V3.3 *** A0A1U8H3W7_CAPAN) Solyc04g057870.3 661 847 678 668 653 695 700 810 752 657 618 714 684 792 622 plastid transcriptionally active 6 (AHRD V3.3 *** AT1G21600.2) AT1G21600 Solyc04g057880.3 803 811 1205 1095 922 1077 1211 892 869 631 1099 865 914 990 958 Histone-lysine N-methyltransferase ASHH2 (AHRD V3.3 *** A0A2G2WXU8_CAPBA) AT1G77300 Solyc04g057890.3 206 111 172 143 160 127 136 107 155 134 201 121 153 112 167 Glutathione S-transferase family protein (AHRD V3.3 *** A0A2U1N1I4_ARTAN) AT1G77290 Solyc04g057900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein yippee-like (AHRD V3.3 *** XP_025887510.1) Solyc04g057910.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 --* A0A1Q3CRE6_CEPFO) Solyc04g057920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *-* A0A2I4FWI7_9ROSI) Solyc04g057930.4 698 636 598 738 312 335 329 346 736 722 563 462 979 444 420 Pkinase domain-containing protein/Usp domain-containing protein (AHRD V3.3 *** A0A1Q3D4V0_CEPFO) AT1G77280 Solyc04g057940.4 44 31 16 118 21 14 15 11 109 77 80 8 46 29 84 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WYB6_CAPBA) Solyc04g057950.2 101 82 36 50 72 54 76 38 61 71 21 67 78 73 61 F-box family protein (AHRD V3.3 *** I0J3I6_ARAHH) AT3G18150 Solyc04g057960.4 1886 800 821 713 567 656 686 604 693 884 846 675 566 834 911 Peroxisome biogenesis protein 1 (AHRD V3.3 *** A0A1U8F2X9_CAPAN) AT5G08470 Solyc04g057970.3 232 206 265 242 241 346 262 293 249 198 219 248 248 258 217 hypothetical protein (AHRD V3.3 *-* AT1G21560.6) Solyc04g057980.3 228 230 143 103 157 228 195 163 263 116 299 124 200 128 399 Orange Ripening AT4G37925 Solyc04g057990.4 1226 866 668 822 645 717 982 845 859 768 565 769 526 769 681 Zinc finger transcription factor 33 AT1G21580 Solyc04g150158.1 1291 2590 2688 1707 2238 2843 2404 2389 1564 1459 2194 1698 2806 2235 2183 40S ribosomal protein S15a (AHRD V3.3 *** A0A2G3C780_CAPCH) AT5G59850 Solyc04g150159.1 942 1631 2011 1243 1701 2076 1804 1728 1121 1055 1433 1281 1882 1691 1825 40S ribosomal protein S15a (AHRD V3.3 *** A0A2G3C780_CAPCH) AT5G59850 Solyc04g058000.2 6 8 13 12 7 1 7 3 4 1 0 3 5 4 3 Laccase (AHRD V3.3 *** A0A1S4DFV6_TOBAC) Solyc04g058030.3 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** F4IUF5_ARATH) Solyc04g058040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Laccase (AHRD V3.3 *-* A0A314LEZ3_NICAT) Solyc04g058050.1 32 18 29 45 41 46 33 24 17 27 54 27 32 20 23 Unknown protein Solyc04g058060.3 0 0 0 21 6 7 1 0 0 0 0 4 0 1 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** O82168_ARATH) Solyc04g058070.3 199 581 473 500 633 630 592 796 727 489 474 676 507 484 444 UDP-sugar pyrophosphorylase (AHRD V3.3 *** A0A2G2WYE7_CAPBA) AT5G52560 Solyc04g058080.3 44 99 176 183 268 251 196 298 82 80 168 217 33 103 40 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A2G3CL60_CAPCH) AT4G05430 Solyc04g058090.3 998 1040 635 628 574 681 713 623 552 551 532 623 999 785 612 Phosphoribosylformylglycinamidine cyclo-ligase (AHRD V3.3 *** A0A1U8G9K5_CAPAN) AT3G55010 Solyc04g058100.3 66 6 146 174 4 0 0 1 72 20 70 1 22 21 92 Metallothionein-like protein (AHRD V3.3 *** A8DUB1_SOLLC) Solyc04g058110.3 115 77 65 91 1 6 11 4 69 68 115 31 98 54 80 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3CF44_CAPCH) Solyc04g058120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine synthase (AHRD V3.3 *-* A0A2G2W6H7_CAPBA) Solyc04g058130.3 128 101 67 73 96 57 89 85 83 109 23 74 82 98 86 hexokinase-2-like (AHRD V3.3 *-* XP_022894059.1) Solyc04g058140.3 990 655 473 455 357 494 401 408 422 546 507 432 507 592 504 GTPase OBG (AHRD V3.3 *** A0A2K3NYU9_TRIPR) AT1G07615 Solyc04g058150.3 362 236 1385 1306 1044 791 870 399 361 322 1029 220 322 270 1053 Metallothionein-like protein (AHRD V3.3 *** A8DUB1_SOLLC) Solyc04g058160.2 1 0 4 3 5 4 3 5 3 1 0 1 15 6 0 Calcium-dependent protein kinase (AHRD V3.3 --* CDPK_DAUCA) AT1G21550 Solyc04g058170.1 12 4 11 5 0 0 0 0 3 5 12 1 22 18 29 Calcium-dependent protein kinase (AHRD V3.3 *-* B2KTA9_WHEAT) AT1G21550 Solyc04g058180.4 75 139 234 168 182 193 152 225 147 85 61 179 90 128 76 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PR33_ARTAN) Solyc04g058190.3 349 300 290 372 322 478 376 376 330 269 359 404 258 334 266 PHD domain-containing protein (AHRD V3.3 *** A0A1Q3CJX9_CEPFO) AT1G77250 Solyc04g058200.3 217 132 120 138 116 123 113 105 145 86 101 91 176 151 243 Tetratricopeptide repeat protein 33-like (AHRD V3.3 *-* A0A2K3P2F8_TRIPR) Solyc04g058205.1 1 0 0 0 0 0 0 0 0 0 1 4 8 2 5 Unknown protein Solyc04g063200.1 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0 Unknown protein Solyc04g063210.3 338 1101 1683 2430 1522 1741 1934 1560 3016 1410 2420 2261 1411 1805 1944 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G2WYM3_CAPBA) AT4G26220 Solyc04g063220.1 0 1 0 0 0 0 2 1 1 4 0 4 4 0 0 Unknown protein Solyc04g063230.3 1260 2270 2125 2145 1974 1764 1913 2235 3324 2444 2337 2032 2391 2136 3390 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PWQ7_ARTAN) Solyc04g063240.3 415 765 421 662 1679 1488 1492 1314 812 806 598 737 431 392 503 Protein STAY-GREEN, chloroplastic (AHRD V3.3 *** A0A2G2WYV6_CAPBA) AT1G44000 Solyc04g063245.1 3 0 0 1 14 17 23 14 2 0 0 0 0 2 4 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc04g063270.2 10 25 6 15 10 19 17 11 7 12 29 8 25 12 9 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WYN6_CAPBA) AT2G36730 Solyc04g063280.3 7263 5296 5424 4335 3388 3463 3193 3909 4148 5721 4559 4298 5574 4903 4548 ENTH/VHS, Target of Myb protein 1 (AHRD V3.3 *-* A0A2U1Q4R9_ARTAN) AT1G21380 Solyc04g063290.3 2509 6090 4086 3353 3885 4119 4343 4807 3606 3153 2533 3650 6894 6357 3211 40S ribosomal protein S2 (AHRD V3.3 *** A0A2G2ZPD5_CAPAN) AT2G41840 Solyc04g063300.3 40 76 20 42 36 46 47 41 39 40 51 65 60 72 17 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8GNF2_CAPAN) AT3G26540 Solyc04g063310.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc04g063313.1 6 4 1 3 13 7 10 7 6 12 0 11 5 8 4 Unknown protein Solyc04g063317.1 4 23 8 2 3 7 16 9 9 18 8 6 21 25 4 Unknown protein Solyc04g063320.1 47 33 34 28 37 26 33 17 26 22 13 20 25 31 20 Unknown protein Solyc04g063330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g063340.3 29 48 52 31 54 41 50 42 41 24 53 31 58 49 61 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1N9K4_ARTAN) AT1G43980 Solyc04g063350.3 2518 1088 1105 1229 678 723 542 681 1270 2448 2269 1246 755 1221 1898 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial (AHRD V3.3 *** A0A2G3CL46_CAPCH) AT1G21400 Solyc04g063360.3 1627 1979 2230 2070 1936 1964 2296 2004 1571 1181 1634 1502 1751 2285 2226 ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A1J3JD08_NOCCA) AT5G64580 Solyc04g063370.3 9 18 35 27 18 14 28 18 17 13 23 9 16 29 123 protein kinase 2B, chloroplastic-like (AHRD V3.3 *** A0A2I4DLK3_9ROSI) Solyc04g063380.3 5645 1625 1660 1749 876 918 748 665 1136 2331 2069 1333 1318 1473 2474 F-box protein SKP2A (AHRD V3.3 *** A0A1U8F5B3_CAPAN) AT1G21410 Solyc04g063390.2 118 113 200 164 243 217 186 190 177 97 128 105 89 132 59 Chaperone protein dnaJ 10 (AHRD V3.3 *** A0A2G2ZPA7_CAPAN) AT1G77020 Solyc04g063400.3 78 70 111 88 50 70 76 26 59 56 85 43 89 52 133 Auxin efflux carrier component (AHRD V3.3 *-* A0A2Z7CF18_9LAMI) Solyc04g063410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box and associated interaction domains-containing protein (AHRD V3.3 --* AT1G11270.2) Solyc04g063415.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3NSW3_TRIPR) AT5G62510 Solyc04g063430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A1J3E3C7_NOCCA) Solyc04g063440.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3NSW3_TRIPR) AT5G62510 Solyc04g064440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3NSW3_TRIPR) AT5G62510 Solyc04g064450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A2U1PY13_ARTAN) Solyc04g064460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein (AHRD V3.3 *-* XP_004237711.1) Solyc04g064470.2 161 50 85 51 27 28 26 11 44 42 94 63 28 42 88 Glutathione S-transferase (AHRD V3.3 *-* A0A200PZB1_9MAGN) Solyc04g064480.3 177 127 110 95 101 139 144 130 107 128 124 164 124 140 84 Unknown protein Solyc04g064490.3 336 555 487 559 627 648 573 621 557 500 476 520 570 500 617 Hexosyltransferase (AHRD V3.3 *** A0A2G2WYI5_CAPBA) AT2G20810 Solyc04g064500.4 1577 1924 1940 1983 2412 2417 2344 2148 2093 1896 1845 1665 2857 2167 1805 Protein phosphatase 2C (AHRD V3.3 *** Q8S8Z0_MESCR) AT1G43900 Solyc04g064510.3 745 762 774 774 751 706 605 801 959 833 587 708 828 849 719 RAB GTPase (AHRD V3.3 *** A0A2U1PC99_ARTAN) AT1G43890 Solyc04g064520.4 114 140 292 249 206 196 268 106 88 88 258 142 156 182 210 Unknown protein Solyc04g064530.1 1687 716 513 494 14 23 13 36 177 1449 495 145 1028 756 396 polyadenylate-binding protein 1-B-binding protein (AHRD V3.3 *** AT4G19950.1) Solyc04g064540.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 115 AT4G33450 Solyc04g064545.1 149 53 43 64 33 30 19 36 69 92 22 64 28 55 24 Unknown protein Solyc04g064550.1 2882 1292 1539 1047 604 796 671 596 1121 1423 1762 905 1154 1244 1699 gras6 AT1G21450 Solyc04g064560.4 605 657 623 572 693 746 637 751 520 401 513 538 712 652 517 Small RNA degrading nuclease 5 (AHRD V3.3 *** A0A1U8GES2_CAPAN) AT5G25800 Solyc04g064570.3 935 871 848 737 686 641 610 670 663 638 627 762 1117 869 805 Ribosome maturation protein SBDS (AHRD V3.3 *** A0A2G3CLY3_CAPCH) AT1G43860 Solyc04g064580.1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc04g064590.3 27 11 10 20 35 21 25 19 11 5 28 10 6 6 10 MAP kinase kinase kinase 33 Solyc04g064600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g064610.3 75 101 52 96 65 82 55 48 93 92 46 77 35 71 28 Bidirectional sugar transporter SWEET (AHRD V3.3 *** M1CBD6_SOLTU) AT1G21460 Solyc04g064620.4 423 124 81 87 49 48 23 63 74 124 46 108 47 66 29 Bidirectional sugar transporter SWEET (AHRD V3.3 *** M1CBD4_SOLTU) Solyc04g064630.3 1 2 47 45 16 26 10 22 0 4 0 0 3 6 3 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVF6_SOLTU) Solyc04g064640.4 38 12 46 38 25 18 13 20 26 12 16 20 24 16 35 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVF7_SOLTU) Solyc04g064650.1 14 40 24 12 2 10 14 24 18 6 4 25 2 3 26 pentatricopeptide repeat-containing protein At3g29230-like (AHRD V3.3 *** A0A2I4HTW6_9ROSI) Solyc04g064660.1 29 33 19 20 12 6 9 8 27 8 18 17 15 47 23 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CLX2_CAPCH) AT3G21470 Solyc04g064670.3 440 386 135 311 477 571 522 447 288 326 215 197 267 125 229 Photosystem II reaction center PsbP family protein (AHRD V3.3 *** A0A0F7GXL4_9ROSI) AT1G77090 Solyc04g064680.4 447 669 886 1005 832 895 1055 782 637 667 1004 689 671 651 741 Exostosin-like (AHRD V3.3 *** A0A200PUY7_9MAGN) AT1G21480 Solyc04g064690.4 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4BT60_SOLLC) Solyc04g064700.4 4263 2919 2051 2147 1946 2037 2101 2261 2394 2483 2010 2227 2456 2765 2112 Transcription elongation factor SPT5 (AHRD V3.3 *** A0A2G3CM29_CAPCH) AT4G08350 Solyc04g064710.3 0 1 3 3 6 3 0 0 3 1 0 3 0 8 1 Alcohol dehydrogenase (AHRD V3.3 *** Q42953_TOBAC) AT1G77120 Solyc04g064720.3 253 258 235 319 271 243 319 262 299 284 203 268 259 363 272 Maltose excess protein 1, chloroplastic (AHRD V3.3 *** A0A2G2ZPK8_CAPAN) AT5G17520 Solyc04g064730.2 0 7 8 2 24 2 9 5 2 4 0 3 0 7 0 Unknown protein Solyc04g064740.4 124 139 144 93 116 126 117 121 91 138 111 120 168 146 155 Protein trichome berefringence-like 7 (AHRD V3.3 *** A0A2G3CMT1_CAPCH) Solyc04g064750.2 100 111 60 71 86 76 86 99 96 93 69 100 76 118 86 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3CMP1_CAPCH) AT3G09040 Solyc04g064760.3 190 476 844 711 765 896 888 865 570 401 412 579 303 517 551 Carboxypeptidase (AHRD V3.3 *** A0A1U8GE15_CAPAN) AT5G42240 Solyc04g064770.1 1167 1175 1497 1865 2036 2170 1480 2817 686 1156 575 497 1621 666 915 Zinc finger transcription factor 34 AT3G18640 Solyc04g064790.3 829 680 711 866 673 765 793 694 799 735 750 740 737 695 839 Hexosyltransferase (AHRD V3.3 *** K4BT70_SOLLC) AT1G77130 Solyc04g064800.4 1047 1277 1166 1169 1051 1294 1403 1221 1042 797 1047 992 1191 1142 1093 Zinc finger transcription factor 35 AT3G18640 Solyc04g064805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) ATMG00240 Solyc04g064810.4 805 1005 1173 850 640 722 676 658 846 875 975 689 1097 933 889 Integral membrane metal-binding family protein (DUF2296) (AHRD V3.3 *** F4JR68_ARATH) AT4G31080 Solyc04g064820.3 422 425 490 461 383 382 448 454 426 386 363 450 554 497 561 Vacuolar protein sorting-associated protein 45-like protein (AHRD V3.3 *** A0A1U8GE37_CAPAN) AT1G77140 Solyc04g064830.4 231 163 142 104 116 121 127 127 150 122 110 113 136 111 160 Transcriptional factor B3 family protein (AHRD V3.3 *** A0A2H1ZEQ2_ARATH) Solyc04g064840.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G3CIN0_CAPCH) Solyc04g064850.3 395 214 305 290 231 315 318 242 173 200 232 211 281 280 234 Protein LAZ1-like protein 1 (AHRD V3.3 *** A0A2G2WZ08_CAPBA) AT1G77220 Solyc04g064860.1 63 42 86 51 30 28 32 33 39 68 49 32 60 42 26 MADS-box transcription factor 23 (AHRD V3.3 *** A0A2G2Y5S9_CAPAN) Solyc04g064870.3 154 218 75 128 10 5 4 6 23 143 86 25 841 168 89 Pathogen-related protein (AHRD V3.3 *** A0A1U8GE43_CAPAN) Solyc04g064880.4 15 26 11 6 0 0 0 0 12 13 3 4 19 25 4 Pathogen-related protein (AHRD V3.3 *** A0A1U8GE43_CAPAN) Solyc04g064890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g064900.1 2 2 0 2 0 0 0 0 0 0 0 0 0 0 0 Endoglucanase (AHRD V3.3 *-* Q6W6R7_MEDTR) Solyc04g064910.1 0 7 0 0 0 0 0 0 0 0 0 0 3 3 7 endoglucanase 25-like (AHRD V3.3 *-* A0A2I4GZ90_9ROSI) Solyc04g064920.4 41 5 1 10 0 2 4 7 6 11 9 4 3 10 14 Glycolipid transfer protein 3 (AHRD V3.3 *** A0A2G3CMX1_CAPCH) AT3G21260 Solyc04g064930.3 346 371 522 405 411 450 452 399 384 326 429 335 246 380 413 Thioredoxin superfamily protein (AHRD V3.3 *** AT1G21350.3) AT1G21350 Solyc04g064940.3 32 51 48 77 32 66 40 49 69 63 150 57 46 42 70 Receptor-like protein kinase 2 (AHRD V3.3 *** A0A314KW93_NICAT) Solyc04g064950.1 30 3 37 41 18 31 22 17 19 20 16 33 24 18 32 Filament-like plant protein (AHRD V3.3 *-* A0A2R6PZM2_ACTCH) Solyc04g064952.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g064954.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g064956.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g064958.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g070960.3 12 19 6 16 4 4 7 3 13 7 15 9 16 20 73 Dof zinc finger protein DOF1.2 (AHRD V3.3 *** A0A2G2XV69_CAPAN) AT3G52440 Solyc04g070970.4 2 245 31 99 447 434 573 488 192 163 74 107 8 30 0 ABC transporter G family member 27 (AHRD V3.3 *** A0A2G3CMS7_CAPCH) Solyc04g070980.4 324 2726 1927 2735 3913 3566 4046 4713 6471 3879 3968 7140 2005 3287 2449 cycloartenol synthase 1 AT2G07050 Solyc04g070990.4 651 655 685 650 744 785 726 710 714 596 620 669 793 828 761 E4/E8 binding protein 1 Solyc04g070995.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc04g071000.1 6 6 3 9 21 16 14 23 14 7 9 10 7 14 1 Receptor-like kinase (AHRD V3.3 *** A7VM22_MARPO) AT5G42120 Solyc04g071010.4 1000 1414 813 1251 1354 1000 1144 1425 1325 1614 898 1503 1103 1247 717 Mitochondrial substrate carrier family protein (AHRD V3.3 *-* A0A1Y1IIA1_KLENI) Solyc04g071020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* M9THZ5_SOLCA) Solyc04g071030.1 507 293 445 250 208 252 177 181 277 201 1144 432 276 269 491 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WYL4_CAPBA) Solyc04g071040.4 1818 1997 2556 1937 1899 2331 2294 2015 2149 1915 2011 2157 1891 2129 1585 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A1P8B4Z7_ARATH) AT1G76950 Solyc04g071050.4 606 557 501 444 391 346 433 370 447 480 345 434 560 562 494 RNA-binding protein 2-like (AHRD V3.3 *** A0A2I4GWB3_9ROSI) AT1G76940 Solyc04g071060.3 1 4 1 20 1 0 0 0 0 3 0 1 1 1 7 RNA-binding protein 2-like, partial (AHRD V3.3 *-* XP_004253475.2) Solyc04g071070.2 12041 21756 31577 211461 12695 13117 52282 26179 48166 312118 70568 49434 44306 67462 69509 Unknown protein Solyc04g150160.1 16 21 23 150 4 10 66 30 65 201 56 48 50 70 64 Unknown protein Solyc04g071080.2 2 6 5 11 1 0 7 5 8 24 6 4 5 9 8 extensin-like, partial (AHRD V3.3 *-* XP_019067293.2) Solyc04g071083.1 43 86 85 412 35 27 115 60 1692 2373 135 569 133 199 181 Unknown protein Solyc04g150161.1 2435 1395 796 6641 111 44 122 78 377 5177 828 168 721 2502 707 Unknown protein Solyc04g071087.1 1 0 13 1 0 1 0 0 2 1 0 0 2 0 0 Unknown protein Solyc04g071120.3 1644 435 618 485 168 317 311 219 307 698 787 430 250 414 748 Protein kinase domain (AHRD V3.3 *** A0A200RCD5_9MAGN) Solyc04g071130.1 1679 1107 739 1611 1052 964 1091 1353 714 2316 999 1363 718 1219 679 SKP1-interacting partner 15 (AHRD V3.3 *** A0A1U8GEI0_CAPAN) AT1G76920 Solyc04g071135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MZL8_TRIPR) ATMG00240 Solyc04g071140.3 4572 1889 2197 2369 1239 1140 1081 1171 2125 1998 2213 1924 1031 1863 4033 Serine decarboxylase (AHRD V3.3 *** A0A2G3CMP8_CAPCH) AT1G43710 Solyc04g071150.3 0 0 0 12 6 3 0 1 10 0 1 1 2 0 14 Cytochrome P450 (AHRD V3.3 *** A0A2U1NTV8_ARTAN) Solyc04g071160.3 3993 1618 1095 1117 791 743 750 849 1132 1586 1239 1191 1555 1487 1520 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *-* Q8H1F0_ARATH) AT1G43700 Solyc04g150162.1 86 76 133 280 28 41 6 5 24 47 6 0 91 39 165 Vacuolar iron transporter-like protein 4 (AHRD V3.3 *** A0A2G3CN36_CAPCH) AT1G21140 Solyc04g071180.3 280 375 367 390 366 359 404 329 274 285 319 301 534 388 453 COMPLEX 1 LYR-like protein (AHRD V3.3 *** AT3G17300.3) AT3G17300 Solyc04g071190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g071200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g071210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g071220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin (AHRD V3.3 *** A0A2G3CN11_CAPCH) Solyc04g071230.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin (AHRD V3.3 *** B1NJ25_OPUST) Solyc04g071240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g071250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g071260.3 0 1 0 0 7 6 3 5 1 0 0 0 0 0 0 Actin (AHRD V3.3 *** Q5XPX5_SACOF) Solyc04g071265.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc04g071270.1 0 0 0 0 6 1 0 1 0 0 0 1 0 0 0 F-box family protein (AHRD V3.3 *** A0A2U1L823_ARTAN) AT5G07610 Solyc04g071280.3 168 89 62 98 78 60 88 95 132 107 77 112 73 137 55 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WXC0_CAPBA) AT3G61360 Solyc04g150163.1 152 42 90 108 93 69 72 58 53 35 96 78 65 118 136 Unknown protein Solyc04g071290.4 341 190 294 283 343 410 299 353 300 252 303 252 221 256 371 Plant organelle RNA recognition domain-containing protein (AHRD V3.3 *** A0A103XZ90_CYNCS) AT2G31290 Solyc04g071295.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g071300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *-* A0A2G2WJI2_CAPBA) Solyc04g071310.3 463 614 645 559 790 904 839 777 514 413 593 494 736 654 745 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein (AHRD V3.3 *** AT4G30820.3) AT4G30820 Solyc04g071320.4 629 946 1040 909 1112 1205 1230 1154 953 634 811 872 911 922 753 ubiquitin carboxyl-terminal hydrolase FAM188A-like (AHRD V3.3 *** A0A2I4GXK6_9ROSI) AT1G43690 Solyc04g071330.4 551 330 366 412 431 352 399 316 374 300 368 317 318 383 434 Armadillo repeat-containing protein 7-like (AHRD V3.3 *** A0A2K3L4G0_TRIPR) AT5G37290 Solyc04g071340.5 676 252 140 176 372 289 262 280 216 266 152 202 207 81 217 Fructose-1,6-bisphosphatase (AHRD V3.3 *** A6N9A0_FLALI) AT1G43670 Solyc04g071350.3 2415 3087 2980 3116 2869 3357 3759 3245 3144 2620 2591 2477 3415 3267 3020 Exocyst complex component SEC5B (AHRD V3.3 *** A0A2G2V1U5_CAPBA) AT1G76850 Solyc04g071360.4 686 1352 1141 1245 1332 1838 1760 1420 1632 709 2648 908 765 891 1261 Trihelix transcription factor GTL1 (AHRD V3.3 *** A0A2G2WZ78_CAPBA) AT1G76880 Solyc04g071370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g071375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g071380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin-like-specific protease ESD4 (AHRD V3.3 -** XP_021808599.1) Solyc04g071400.4 11 91 58 100 146 94 114 106 33 51 111 129 56 48 18 WAT1-related protein (AHRD V3.3 *** K4BTD2_SOLLC) Solyc04g071410.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Endoglucanase (AHRD V3.3 *-* A0A2G2YFC4_CAPAN) Solyc04g071420.3 425 426 487 396 364 444 480 411 503 424 383 437 294 375 508 Thioredoxin superfamily protein (AHRD V3.3 *** AT2G31840.2) AT2G31840 Solyc04g071430.2 121 106 114 80 23 22 46 45 33 114 22 37 130 89 98 WAT1-related protein (AHRD V3.3 *** K4BTD5_SOLLC) AT1G43650 Solyc04g071440.3 1177 1287 1238 1352 1466 1519 1517 1463 1361 1427 1472 1478 1136 1123 1217 Tubby-like F-box protein (AHRD V3.3 *** A0A1U8GMZ9_CAPAN) AT1G76900 Solyc04g071470.3 347 317 219 334 239 295 322 242 274 257 299 264 269 315 240 WD40/YVTN repeat-like-containing domain-containing protein (AHRD V3.3 *** A0A2U1MCG0_ARTAN) Solyc04g071480.1 705 719 836 424 331 287 242 277 369 334 2158 490 840 405 1077 Plant/F1M20-13 protein (AHRD V3.3 *** G7IBZ7_MEDTR) AT1G18740 Solyc04g071490.3 10 18 22 22 20 25 16 10 19 13 12 3 25 12 6 HSP20-like chaperones superfamily protein (AHRD V3.3 *-* A0A1P8AQG9_ARATH) AT1G76770 Solyc04g071500.4 338 1382 1502 1259 3017 2717 2336 3084 945 1050 1445 2338 1046 1196 510 Cupredoxin superfamily protein (AHRD V3.3 *** AT1G21090.1) AT1G21090 Solyc04g071510.3 501 402 420 315 200 203 241 184 375 289 400 278 448 375 422 Protein ABSCISIC ACID-INSENSITIVE 5 (AHRD V3.3 *** A0A2G3CMZ5_CAPCH) AT5G44080 Solyc04g071520.3 121 72 128 38 4 15 15 13 18 96 42 23 4 48 3 Transcription elongation factor (TFIIS) family protein (AHRD V3.3 *** A0A1P8BE77_ARATH) Solyc04g071523.1 3 3 12 2 0 0 0 0 1 2 4 0 2 2 19 UPF0496 protein (AHRD V3.3 *** A0A2U1KPX1_ARTAN) Solyc04g071530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc04g071540.4 350 606 466 583 556 568 670 652 518 419 590 523 523 468 424 Sterol 3-beta-glucosyltransferase (AHRD V3.3 *** B6SKE1_MAIZE) AT1G43620 Solyc04g071550.2 511 620 544 540 785 769 696 830 728 832 595 671 721 661 484 Sphingomyelin synthetase family protein (AHRD V3.3 *** AT1G43580.1) AT1G43580 Solyc04g071560.4 99 308 394 424 437 417 405 411 380 265 355 352 299 342 232 Thioredoxin Y2, chloroplastic (AHRD V3.3 *** A0A2G2ZPW1_CAPAN) AT1G76760 Solyc04g071580.3 418 459 668 691 480 623 617 510 491 630 560 479 409 535 676 Abscicic acid stress ripening 2 Solyc04g071590.3 17 2 0 3 1 0 0 0 14 2 6 0 3 2 12 Abscisic acid stress ripening 3 Solyc04g071600.3 0 5 0 1 0 0 0 0 14 1 7 0 10 1 8 Abscisic acid stress ripening 5 Solyc04g071610.4 3269 2913 6354 4521 853 870 612 462 4068 2726 10593 3334 4556 5221 28990 Abscicic acid stress ripening 1 Solyc04g071630.3 176 125 128 112 82 87 95 72 81 116 72 77 91 99 73 hypothetical protein (AHRD V3.3 *** AT4G08330.1) AT4G08330 Solyc04g071640.1 0 0 2 0 2 1 3 0 1 3 0 0 4 0 0 Egg cell 1 (AHRD V3.3 *** A0A0K1YV38_TOBAC) AT2G21740 Solyc04g071650.4 1304 3003 3852 3626 2508 2938 2988 2233 5106 4062 6810 2798 3380 2184 4104 Cellulose synthase (AHRD V3.3 *** K4BTF5_SOLLC) Solyc04g071660.3 977 2110 2490 2378 2916 3571 3715 3266 2351 1336 2209 2641 849 2061 1474 hypothetical protein (AHRD V3.3 *-* AT1G76740.1) Solyc04g071670.1 1 0 1 0 0 3 0 0 1 0 0 0 0 0 0 Unknown protein Solyc04g071675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc04g071680.2 7 8 76 47 18 45 34 27 68 53 113 36 27 42 38 Receptor protein kinase, putative (AHRD V3.3 *** B9SAG6_RICCO) Solyc04g071690.4 6 0 1 0 0 0 0 0 0 0 2 2 0 2 8 DNA/RNA-binding protein Alba-like (AHRD V3.3 *-* A0A200PTA4_9MAGN) Solyc04g071700.3 309 194 326 271 286 316 270 308 383 319 314 322 200 248 257 5-formyltetrahydrofolate cyclo-ligase-like protein (AHRD V3.3 *** A0A2G3CMU4_CAPCH) AT1G76730 Solyc04g071710.4 391 608 843 679 483 697 686 600 547 504 711 594 783 753 505 Protein LIKE COV 2 (AHRD V3.3 *** A0A2G3CMU5_CAPCH) AT1G43130 Solyc04g071730.3 607 581 696 632 655 749 766 684 556 522 566 580 733 719 642 Syntaxin-81 (AHRD V3.3 *** A0A2G2WXF8_CAPBA) AT1G51740 Solyc04g071750.4 3408 2123 2113 1701 1726 1603 1817 1475 1650 2073 2118 1709 1801 1711 1931 Tubby-like F-box protein (AHRD V3.3 *** A0A2G3D7T8_CAPCH) AT2G18280 Solyc04g071760.3 1 0 0 0 6 0 0 0 0 0 15 8 0 1 0 Protein LIKE COV 2 (AHRD V3.3 *** A0A2G2ZPX7_CAPAN) AT2G18460 Solyc04g071770.3 580 461 291 82 0 8 12 1 842 828 1544 50 646 305 551 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A1U8GDL3_CAPAN) AT5G64750 Solyc04g071775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase BRE1A-like (AHRD V3.3 --* XP_010314382.1) Solyc04g071780.3 4 84 0 12 0 0 0 0 0 0 0 0 52 5 84 Cytochrome P450 (AHRD V3.3 *-* A0A200Q069_9MAGN) Solyc04g071790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200Q069_9MAGN) Solyc04g071800.3 4445 3072 2756 4020 1608 2158 2517 1419 5668 3282 1844 3898 5036 3118 2268 Cytochrome P450 (AHRD V3.3 *-* A0A200Q069_9MAGN) Solyc04g071803.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc04g071805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200Q069_9MAGN) Solyc04g150164.1 173 135 277 177 46 58 61 30 114 131 382 112 141 260 119 Cytochrome P450 (AHRD V3.3 *-* A0A200Q069_9MAGN) Solyc04g071850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant invertase/pectin methylesterase inhibitor protein (AHRD V3.3 *** G7JTM3_MEDTR) Solyc04g071860.3 912 992 1101 1093 1126 1232 1250 1193 1081 1130 1111 1080 1036 1007 912 S-acyltransferase (AHRD V3.3 *** A0A1U8GE89_CAPAN) AT4G24630 Solyc04g071870.1 1053 730 929 692 502 378 359 351 586 887 893 518 993 598 606 Pkinase_Tyr domain-containing protein (AHRD V3.3 *** A0A1Q3BUR9_CEPFO) AT5G42440 Solyc04g071880.3 1181 1358 1304 1287 1378 1500 1450 1546 1384 1411 1245 1493 1927 1645 1279 Pyrophosphate-energized membrane proton pump (AHRD V3.3 *** G5DWK6_SILLA) AT1G16780 Solyc04g071890.3 9257 7898 6644 5875 1382 1329 1146 1868 4681 24155 11255 5241 10895 10579 4015 Peroxidase (AHRD V3.3 *** K4BTH6_SOLLC) AT1G71695 Solyc04g071900.4 4860 4544 5960 6558 4863 3738 3778 5333 11522 5816 4877 4032 6236 8078 11095 Peroxidase (AHRD V3.3 *** K4BTH7_SOLLC) AT1G71695 Solyc04g071920.2 2 1 5 1 0 10 1 0 2 3 0 2 0 2 0 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1LLK8_ARTAN) Solyc04g071930.4 881 1246 716 1345 1507 1168 1145 1614 885 1572 665 1198 569 735 686 Chlorophyll a/b binding protein domain-containing protein (AHRD V3.3 *** A0A2U1NAK6_ARTAN) AT1G34000 Solyc04g071940.3 194 380 379 335 649 548 597 560 452 319 385 457 294 333 282 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1L0Y3_ARTAN),Pfam:PF13561 AT1G52340 Solyc04g071950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g071960.3 13 69 85 51 38 35 41 35 121 73 63 82 50 31 60 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1QER6_ARTAN),Pfam:PF13561 Solyc04g071970.4 1805 1903 2104 1946 2477 2627 2615 2395 1915 1724 2193 1798 2010 1776 1744 Low affinity potassium transport system protein (AHRD V3.3 *** Q8L8X4_ARATH) AT1G22790 Solyc04g071980.3 255 283 353 239 226 273 237 300 248 325 264 269 285 237 284 Holocarboxylase synthetase (AHRD V3.3 *** B3TM33_ELAGV) AT4G09830 Solyc04g071990.3 4080 1062 6301 3832 645 667 762 656 4991 1809 5579 3660 1809 5747 6869 Protein GIGANTEA (AHRD V3.3 *** A0A2G2ZPW3_CAPAN) AT1G22770 Solyc04g072000.4 17 12 12 7 1 4 0 4 204 12 19 4 28 21 36 Chitinase (AHRD V3.3 *** A0A2U1LR12_ARTAN) AT3G54420 Solyc04g072010.3 394 283 237 268 200 207 253 197 257 247 285 236 235 308 223 Carboxypeptidase D (AHRD V3.3 *** A0A2U1MZB8_ARTAN) AT1G71696 Solyc04g072020.3 1393 450 338 367 63 91 63 63 335 737 436 219 413 344 549 Choline/Ethanolamine kinase (AHRD V3.3 *** A0A200QCA0_9MAGN),Pfam:PF01633 AT1G71697 Solyc04g072030.1 41 23 42 22 9 23 14 24 27 32 14 16 70 37 27 Dynamin-related protein 4C (AHRD V3.3 *** A0A2G2WZ74_CAPBA) AT1G60500 Solyc04g072031.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 5 transmembrane protein (AHRD V3.3 *** AT1G22750.1) AT1G22750 Solyc04g072032.1 389 790 621 545 798 666 675 867 643 656 418 763 868 762 513 Microsomal signal peptidase 25 kDa subunit(SPC25)-like protein (AHRD V3.3 *** Q6Z7E3_ORYSJ) AT2G39960 Solyc04g072033.1 224 280 208 232 223 200 245 224 393 285 261 330 201 292 194 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q9SZ91_ARATH) AT4G09750 Solyc04g072034.1 1504 510 563 460 70 94 109 55 217 613 786 289 217 505 831 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q9SZ91_ARATH) Solyc04g072035.1 1703 555 685 417 92 84 130 91 392 759 569 402 321 551 991 Inositol polyphosphate 5-phosphatase I (AHRD V3.3 *** F4HT46_ARATH) AT1G71710 Solyc04g072036.1 190 216 401 283 211 216 242 180 302 218 310 250 255 324 278 30S ribosomal protein s1-like (AHRD V3.3 *** A0A2K3PQP5_TRIPR) AT1G71720 Solyc04g072037.1 88 178 285 233 195 138 184 239 173 216 147 237 150 153 162 LRR receptor-like kinase (AHRD V3.3 *** A0A072VNN3_MEDTR) AT1G34110 Solyc04g072038.1 184 412 375 406 472 400 492 400 356 292 194 368 529 472 335 hypothetical protein (AHRD V3.3 *-* AT1G71730.1) AT1G71730 Solyc04g072039.1 296 431 572 578 546 520 542 397 396 399 506 496 523 476 565 Hypoxanthine phosphoribosyltransferase (AHRD V3.3 *** A0A1U8F9W7_CAPAN) AT1G71750 Solyc04g072040.1 21 72 125 72 150 179 148 144 72 52 73 115 31 61 48 hypothetical protein (AHRD V3.3 *-* AT1G71760.2) Solyc04g072043.1 2 49 36 19 27 44 18 38 20 15 24 20 51 43 18 Polyadenylate-binding protein (AHRD V3.3 *** A0A2G3CN64_CAPCH) AT1G71770 Solyc04g072045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc04g072047.1 2008 2691 2816 2456 3150 2860 2891 3529 2940 2398 2848 3067 3105 2748 2801 MALE GAMETOPHYTE DEFECTIVE 1 (AHRD V3.3 *** AT2G21870.1) AT2G21870 Solyc04g072120.2 287 277 230 344 254 242 278 259 317 326 231 275 327 285 281 WD repeat protein (AHRD V3.3 *** AT1G71780.1) AT1G71780 Solyc04g072050.4 222 157 173 154 177 118 134 154 163 208 107 159 193 123 155 transmembrane protein (AHRD V3.3 *** AT1G22750.1) AT1G22750 Solyc04g072060.4 177 435 549 460 574 547 690 551 416 295 463 431 556 546 448 Ras-related protein (AHRD V3.3 *** A0A2U1L351_ARTAN) AT4G09720 Solyc04g072070.3 219 187 218 19 0 3 1 0 15 123 171 8 981 352 76 WRKY transcription factor 55 Solyc04g072080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dynamin-related protein 4C (AHRD V3.3 *-* A0A2G2ZPX2_CAPAN) Solyc04g072090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dynamin-related protein 4C (AHRD V3.3 *-* A0A2G2ZPX2_CAPAN) Solyc04g072100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dynamin-related protein 4C (AHRD V3.3 *-* A0A2G2ZPX2_CAPAN) Solyc04g072110.4 204 301 414 241 278 308 306 252 241 173 374 223 287 291 457 Microsomal signal peptidase 25 kDa subunit(SPC25)-like protein (AHRD V3.3 *-* Q6Z7E3_ORYSJ) Solyc04g072130.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Programmed cell death protein 4 (AHRD V3.3 *** A0A1J3JH10_NOCCA) AT1G22730 Solyc04g072135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g072140.4 607 376 481 324 327 322 379 413 320 384 363 276 387 498 449 tRNA pseudouridine synthase (AHRD V3.3 *** A0A2G3CNB1_CAPCH) AT1G34150 Solyc04g150166.1 5 3 3 4 37 15 5 10 7 3 6 22 6 5 0 Unknown protein Solyc04g072150.3 154 103 125 65 60 103 138 86 83 105 52 97 71 65 84 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PQL5_9MAGN) AT4G17616 Solyc04g072160.3 400 323 404 366 263 262 266 267 288 134 197 279 343 199 135 ripening regulated protein DDTFR8 Solyc04g072170.1 48 88 67 85 87 63 89 100 65 87 46 117 73 75 71 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VQR8_CAPBA) AT1G34160 Solyc04g072180.3 343 513 555 632 568 701 756 688 397 519 466 638 288 501 398 Sphinganine C(4)-monooxygenase 1 (AHRD V3.3 *** A0A2G3CNA5_CAPCH) Solyc04g072200.3 267 347 261 312 289 290 305 401 336 279 199 304 304 308 253 FRIGIDA-like protein (AHRD V3.3 *** A0A2G3CN98_CAPCH) Solyc04g072210.4 286 479 430 314 610 574 496 659 477 206 424 411 417 421 282 plectin-like protein (AHRD V3.3 *** AT5G01570.3) AT3G08880 Solyc04g072220.3 1413 863 1126 776 674 736 662 692 1032 1232 1003 801 1116 1026 946 NAC domain-containing protein 78 (AHRD V3.3 *** A0A1U8FBG6_CAPAN) AT1G34190 Solyc04g072230.4 670 436 600 558 490 536 600 457 631 564 637 509 490 462 806 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1PVM4_ARTAN) AT1G71810 Solyc04g072240.3 814 1494 1106 1456 2226 2023 2101 2886 2039 1592 1113 1809 2082 1546 978 Oxidoreductase (AHRD V3.3 *** A0A2U1NRZ1_ARTAN) AT4G09670 Solyc04g072250.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17.5 kDa class I heat shock protein (AHRD V3.3 *-* A0A2G3CNC4_CAPCH) Solyc04g072260.3 2826 2073 1623 1332 775 823 926 753 1214 903 1117 1062 1624 2120 1937 Midasin (AHRD V3.3 *** A0A2G2ZQ87_CAPAN) AT1G67120 Solyc04g072270.1 1 12 10 3 15 12 8 9 6 8 7 16 8 13 36 Midasin (AHRD V3.3 *-* A0A2G2ZQ87_CAPAN) Solyc04g072280.3 0 0 2 12 0 0 0 0 7 0 1 0 2 7 17 Laccase (AHRD V3.3 *** K4BTL5_SOLLC) AT5G09360 Solyc04g072290.3 1149 1118 1079 1269 1280 1209 1227 1265 1213 1038 1208 1147 1018 1256 1127 Exocyst complex component SEC6 (AHRD V3.3 *** A0A2G3CNC7_CAPCH) AT1G71820 Solyc04g072300.1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 2 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A1U8GHV9_CAPAN) Solyc04g072310.3 855 597 809 678 441 400 393 333 488 434 588 569 942 688 653 histone-lysine N-methyltransferase SETD1B-A (AHRD V3.3 *** XP_004237854.1) Solyc04g072320.3 16 2 1 6 0 3 3 0 1 5 7 6 4 2 15 ABC transporter C family member 8 (AHRD V3.3 *-* A0A2G3CNG8_CAPCH) Solyc04g072330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *** I0J3I6_ARAHH) AT1G78760 Solyc04g072340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter C family member 8 (AHRD V3.3 *-* A0A2G3CNG8_CAPCH) Solyc04g072350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g072360.2 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0 FBD-associated F-box protein (AHRD V3.3 *-* A0A1J3E4W0_NOCCA) AT1G78760 Solyc04g072370.3 115 44 22 31 0 0 0 1 11 13 19 0 44 26 22 Unknown protein Solyc04g072380.3 117 158 91 169 138 163 153 172 138 98 36 123 182 209 92 Glutaredoxin domain-containing protein/DEP domain-containing protein/DUF547 domain-containing protein (AHRD V3.3 *** A0A1Q3AUF5_CEPFO) AT4G08550 Solyc04g072390.3 239 465 352 461 450 469 464 426 469 388 428 385 547 531 395 alkylated DNA repair protein alkB homolog 8-like (AHRD V3.3 *** A0A2I4H0H7_9ROSI) AT1G36310 Solyc04g072400.4 540 607 516 439 556 544 560 553 559 435 358 450 789 736 664 hypothetical protein (AHRD V3.3 *** AT1G36320.1) AT1G36320 Solyc04g072410.3 350 463 652 658 744 787 820 641 434 530 675 500 448 561 636 Transport protein particle (TRAPP) component (AHRD V3.3 *** A0A2U1LSV2_ARTAN) AT3G05000 Solyc04g072420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g150167.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FBD-like protein (AHRD V3.3 *** A0A2U1LEC4_ARTAN) Solyc04g072430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g072435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain, FBD domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *** A0A2U1MKL9_ARTAN) Solyc04g072440.4 1532 1234 1347 1587 1264 1419 1443 1284 1082 1352 1271 1268 1438 1431 1441 DNA-directed RNA polymerase II protein (AHRD V3.3 *-* A0A2U1QD28_ARTAN) AT4G08540 Solyc04g072450.3 1696 2135 3680 2099 3028 2674 1969 2936 3558 2038 3498 3387 2333 2921 2386 acidic leucine-rich nuclear phosphoprotein 32 family member B (AHRD V3.3 *-* XP_010320137.1) Solyc04g072460.3 1673 708 648 770 415 336 322 279 490 810 606 396 1296 766 1212 Transcription factor TGA7 (AHRD V3.3 *** A0A2G2WZD9_CAPBA) AT1G77920 Solyc04g072470.4 1 0 24 8 0 0 0 0 0 2 5 3 0 2 4 defensin Tk-AMP-D6-like (AHRD V3.3 *** A0A1U8GDD3_CAPAN) Solyc04g072480.3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 Phosphopantothenate--cysteine ligase 2 (AHRD V3.3 *** A0A1U8GMM4_CAPAN) AT1G12350 Solyc04g072490.4 81 216 121 177 333 258 232 225 195 122 107 204 149 157 141 Mitochondrial transcription termination factor family protein (AHRD V3.3 *-* Q9SD94_ARATH) Solyc04g072500.1 258 273 299 236 323 299 249 293 241 220 263 326 266 341 244 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** B4FH48_MAIZE) AT5G07900 Solyc04g072505.1 0 1 0 1 0 0 1 2 3 1 2 0 5 1 0 Unknown protein Solyc04g072510.3 458 566 507 531 630 655 582 496 421 489 422 491 534 547 463 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** B4FH48_MAIZE) AT5G07900 Solyc04g072520.3 324 507 392 346 523 459 449 452 321 294 242 448 433 491 317 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** Q9SD94_ARATH) AT5G07900 Solyc04g072530.2 342 346 297 276 423 352 257 360 278 309 226 321 330 344 169 Mitochondrial transcription termination factor family protein (AHRD V3.3 *-* Q9SD94_ARATH) Solyc04g072540.3 219 197 131 208 174 182 192 171 167 172 156 187 151 197 143 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** B4FH48_MAIZE) AT5G07900 Solyc04g072550.3 57 106 63 89 128 136 138 176 109 95 69 159 115 97 70 Mitochondrial transcription termination factor-like (AHRD V3.3 *** Q6Z8L0_ORYSJ) AT5G07900 Solyc04g072560.3 1706 1660 1958 1698 1611 1635 1476 1767 1686 1521 1920 1563 2145 1781 1898 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* F4HUX0_ARATH) AT1G34220 Solyc04g072570.3 2800 3367 4334 4117 4887 5056 4647 5151 4208 3894 3720 5571 3112 3981 3429 Receptor-like kinase (AHRD V3.3 *** A0A0K9PIY0_ZOSMR) AT1G34210 Solyc04g072580.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent 6-phosphofructokinase (AHRD V3.3 *** A0A2G2WC06_CAPBA) Solyc04g072590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *** I0J3I6_ARAHH) AT1G78760 Solyc04g072600.3 15 1 14 16 9 5 6 8 5 8 9 3 0 3 0 F-box protein At5g03100-like (AHRD V3.3 *-* XP_004238507.2) Solyc04g072603.1 129 84 118 85 49 60 63 39 47 58 155 59 50 87 82 Unknown protein Solyc04g072607.1 58 22 27 21 35 45 43 28 26 23 91 22 68 33 50 Unknown protein Solyc04g072630.4 1219 1480 1751 1570 1980 2284 2387 1945 1803 1352 1668 1544 1327 1733 1712 sporulation-specific protein (AHRD V3.3 *** AT1G22060.2) AT1G22060 Solyc04g072640.3 214 160 129 212 92 172 155 144 167 156 123 136 172 164 207 Membrane-anchored ubiquitin-fold protein (AHRD V3.3 *** A0A1U8GDC5_CAPAN) AT1G22050 Solyc04g072650.1 0 0 0 0 1 2 0 0 2 0 0 0 0 0 0 structural constituent of ribosome (AHRD V3.3 *-* AT1G22110.3) Solyc04g072660.4 2280 3652 3688 3913 3822 4280 4562 3270 1923 1875 2907 2292 3648 3449 3852 60S ribosomal protein L30 (AHRD V3.3 *** A0A1U8GKR6_CAPAN) AT1G36240 Solyc04g072670.4 11423 9024 8560 9401 7065 7879 8236 7070 6842 8087 8556 7261 8370 9084 9610 Apoptotic chromatin condensation inducer in the nucleus (AHRD V3.3 *-* A0A2K3PQX0_TRIPR) AT4G39680 Solyc04g072680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Apoptotic chromatin condensation inducer in the nucleus (AHRD V3.3 *-* A0A2K3PQX0_TRIPR) Solyc04g072690.3 387 329 460 386 277 383 386 404 328 426 387 425 365 375 399 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1LT79_ARTAN) Solyc04g072700.4 45 7 3 9 0 0 0 1 2 3 2 0 20 19 60 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6RNU7_ACTCH) AT4G08570 Solyc04g072720.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g072725.1 0 0 16 0 2 4 0 2 4 0 1 7 6 2 0 agamous-like MADS-box protein AGL104 isoform X1 (AHRD V3.3 *** A0A2I4H0X0_9ROSI) Solyc04g072730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g072740.3 97 284 242 294 288 284 235 341 494 158 128 292 137 155 59 Sulfate transporter 2.1 (AHRD V3.3 *** A0A2G2ZQE3_CAPAN) AT1G77990 Solyc04g072750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g072760.3 18 36 28 64 47 9 15 24 52 62 26 53 40 36 51 Sulfate transporter (AHRD V3.3 *** S6A1Z9_NICAT) AT1G78000 Solyc04g072770.4 278 272 305 298 187 209 239 173 232 248 359 179 281 370 396 tRNA modification GTPase MnmE (AHRD V3.3 *** A0A1J3D5T8_NOCCA) AT1G78010 Solyc04g072780.4 2826 3188 2238 2879 3907 3535 3235 3824 2413 2105 2128 1647 2669 1833 2830 FCS-Like Zinc finger 5 (AHRD V3.3 *** FLZ5_ARATH) AT1G78020 Solyc04g072790.2 0 4 0 4 2 5 3 5 1 0 0 0 0 5 0 Cellulose synthase (AHRD V3.3 *** K4BTR6_SOLLC) Solyc04g072800.4 184 400 221 341 409 276 338 468 366 380 235 518 317 359 220 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (AHRD V3.3 *** A0A2G3CNK4_CAPCH) AT1G22170 Solyc04g072810.4 1766 811 1278 1190 1055 970 947 879 1205 1509 1510 1299 808 963 1679 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** B6T8I8_MAIZE) AT1G22180 Solyc04g072830.4 747 709 672 800 759 914 953 840 880 583 762 534 594 709 853 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1QEJ7_ARTAN) AT4G30100 Solyc04g072840.3 66 127 43 48 130 76 108 145 169 86 62 80 77 79 53 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1QEJ7_ARTAN) Solyc04g072850.4 388 748 528 896 1190 926 854 1198 1176 1221 768 705 1069 926 1024 Beta-D-xylosidase (AHRD V3.3 *** H1AC33_SOLLC) AT1G78060 Solyc04g072860.3 276 394 400 460 338 349 378 341 575 188 338 208 487 501 320 Beta-D-xylosidase (AHRD V3.3 *** H1AC33_SOLLC) Solyc04g072870.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A2U1QEM6_ARTAN) Solyc04g072880.3 1006 645 733 547 538 533 603 513 606 603 772 519 667 717 745 CycH1_2 AT5G27620 Solyc04g072890.4 2286 684 1227 1381 195 310 250 155 1283 1380 1894 814 851 1206 3954 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** F4I1K5_ARATH) AT1G78070 Solyc04g072900.1 4870 3060 7712 2768 1179 1755 1588 1020 3032 2608 7956 2176 2857 2799 4726 dehydration-responsive element binding protein 3 AT1G78080 Solyc04g072910.3 2683 2207 2461 2185 2071 2146 1943 1830 1809 2070 2158 1844 2154 2244 2251 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (AHRD V3.3 *** A0A2G3CNL7_CAPCH) AT1G36050 Solyc04g072920.4 507 131 100 135 39 49 23 49 161 324 274 170 79 59 93 Trehalose 6-phosphate phosphatase (AHRD V3.3 *** A0A2G3CNJ5_CAPCH) Solyc04g072930.1 1117 753 611 677 881 643 586 708 689 1010 763 858 461 694 505 F-box protein (AHRD V3.3 *** A0A2G3CNP7_CAPCH) AT1G78100 Solyc04g072940.4 289 212 191 216 218 171 129 166 223 205 357 74 181 170 296 nucleolar GTP-binding protein (AHRD V3.3 *** AT1G78110.1) AT1G78110 Solyc04g073940.4 10 62 47 51 27 25 13 28 73 134 118 23 69 62 120 TPR repeat-containing thioredoxin TTL1-like protein (AHRD V3.3 *** A0A2K3PMP8_TRIPR) Solyc04g073950.2 473 616 603 621 948 839 982 824 526 557 671 527 798 751 793 VQ motif protein (AHRD V3.3 *-* A0A2K3NKL0_TRIPR) AT5G65170 Solyc04g073953.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc04g073957.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L8G7_TRIPR) ATMG00240 Solyc04g073960.3 237 98 109 147 90 94 133 85 119 139 281 141 167 137 193 Major facilitator superfamily (AHRD V3.3 *** A0A200QUR2_9MAGN) Solyc04g073970.4 588 2831 1996 2162 4532 3915 3911 4514 2722 2053 2025 2937 2122 2198 1542 PUF domain-containing protein/DUF4057 domain-containing protein (AHRD V3.3 *-* A0A1Q3AUK4_CEPFO) AT1G78150 Solyc04g073980.3 21 38 27 46 56 53 49 45 27 17 49 33 81 26 20 Pumilio 7 (AHRD V3.3 *-* A0A1P8AT22_ARATH) AT1G22240 Solyc04g073990.3 1810 1929 3828 2534 2066 1712 1645 1646 3457 3243 3452 1985 4090 3262 8407 annexin p34 Solyc04g074000.3 1929 838 901 330 117 91 103 65 279 862 602 102 2894 1612 474 Receptor protein kinase, putative (AHRD V3.3 *** A0A061FG24_THECC) AT4G08850 Solyc04g074010.3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor protein kinase, putative (AHRD V3.3 *-* A0A061FG24_THECC) Solyc04g074020.2 56 24 60 27 6 4 3 2 14 37 51 15 87 34 22 Receptor protein kinase, putative (AHRD V3.3 *** A0A061FG24_THECC) AT4G08850 Solyc04g074030.3 515 214 427 209 31 41 50 29 79 233 553 35 649 543 142 Receptor protein kinase, putative (AHRD V3.3 *** A0A061FG24_THECC) AT4G08850 Solyc04g074040.3 6564 3805 3175 2756 2342 2293 2428 2871 2881 2758 3265 2789 3982 3472 3401 Arginine/serine-rich splicing factor, putative, expressed (AHRD V3.3 *-* Q6AVF4_ORYSJ) AT5G64200 Solyc04g074050.4 107 78 128 32 7 9 12 10 51 69 62 5 116 96 48 Receptor protein kinase, putative (AHRD V3.3 *** A0A061FG24_THECC) AT4G08850 Solyc04g074060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor protein kinase, putative (AHRD V3.3 *-* A0A061FG24_THECC) Solyc04g074070.2 3 19 21 12 37 52 38 34 14 19 15 18 10 12 9 Sugar transporter protein 4 AT1G34580 Solyc04g074080.3 1613 1444 1485 1737 1072 960 773 826 1136 995 1568 1476 1085 1258 1044 WW domain-containing protein (AHRD V3.3 *** A0A2U1LGX7_ARTAN) AT1G78170 Solyc04g074090.4 832 1223 1005 762 1057 899 855 966 922 594 694 863 1377 1388 1042 nucleolar complex protein 3 homolog (AHRD V3.3 *** A0A2I4FST4_9ROSI) AT1G79150 Solyc04g074100.3 1047 1426 1486 1380 1281 1550 1488 1147 803 810 1071 942 2515 1940 1499 hypothetical protein (AHRD V3.3 *** AT1G23150.1) AT1G23150 Solyc04g074110.4 78 119 311 351 337 420 402 234 203 205 434 242 139 215 330 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) AT3G53010 Solyc04g074120.4 41 42 51 54 45 63 68 61 81 44 93 90 61 75 58 synaptonemal complex protein 1-like (AHRD V3.3 *** A0A2I4GFH1_9ROSI) AT1G22260 Solyc04g074130.3 150 278 215 207 348 312 282 297 258 163 163 271 230 275 273 Mitochondrial substrate carrier family protein (AHRD V3.3 *** A0A1P8BDC8_ARATH) AT5G64970 Solyc04g074140.4 575 470 615 734 552 730 869 617 464 544 812 537 447 567 833 transmembrane protein (AHRD V3.3 *** AT1G34630.1) AT1G34630 Solyc04g074150.3 145 281 194 211 265 233 254 221 158 179 153 209 298 228 150 Multifunctional methyltransferase subunit TRM112-like protein (AHRD V3.3 *** A0A1J3G352_NOCCA) AT1G22270 Solyc04g074160.3 71 62 66 70 79 71 47 61 80 66 41 95 96 73 85 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q9V5_9MAGN) AT1G77010 Solyc04g074163.1 0 0 5 2 9 10 7 4 4 1 4 2 2 9 7 Unknown protein Solyc04g074167.1 144 453 752 618 677 838 939 878 367 194 710 420 366 335 390 classical arabinogalactan protein 26-like (AHRD V3.3 -** XP_011090863.1) Solyc04g074170.3 15 6 0 27 0 1 0 0 1 0 13 1 2 5 18 MYB transcription factor (AHRD V3.3 *-* A0A0U3IU11_MESCR) AT1G34670 Solyc04g074180.4 2812 2245 1279 2301 2356 2581 2667 2400 2417 2663 1793 1660 1922 1885 2121 cryptochrome 1 AT4G08920 Solyc04g074190.3 301 192 235 198 150 189 141 156 242 213 238 191 221 232 290 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1PV28_ARTAN) Solyc04g074195.1 0 0 9 0 0 0 0 0 0 0 0 0 0 0 1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc04g074220.4 416 896 673 738 1191 1015 857 1161 768 970 593 1049 1128 759 417 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q4PSG2_ARATH) Solyc04g074230.3 1169 2074 2462 1928 3820 4114 4292 3885 1670 1466 2150 2068 1672 2267 2050 SIG74 14-3-3 family protein Solyc04g074240.3 1728 1448 1969 1764 1617 1709 1585 1355 1425 1593 1925 1384 1545 1518 2105 5'-adenylylsulfate reductase-like 4 (AHRD V3.3 *** A0A2G3CNX0_CAPCH) AT1G34780 Solyc04g074250.3 135 284 230 259 304 277 291 326 262 186 181 276 247 272 162 Methyl-CpG binding domain protein (AHRD V3.3 *-* A0A2K3LPB7_TRIPR) Solyc04g074260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methyl-CpG DNA binding (AHRD V3.3 *-* A0A200PN36_9MAGN) Solyc04g074270.3 1291 1007 2605 1250 656 889 673 626 957 1853 2659 878 1287 1162 1538 Outer arm dynein light chain 1 (AHRD V3.3 *** A0A2K3NQ00_TRIPR) AT1G78230 Solyc04g074280.1 424 687 456 639 632 550 533 603 510 513 317 656 600 949 329 Plant organelle RNA recognition domain containing protein (AHRD V3.3 *** A0A2P5BF44_PARAD) AT4G08940 Solyc04g074290.3 492 498 789 731 561 533 515 455 583 462 1055 363 558 486 954 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1P6Q5_ARTAN) AT1G78240 Solyc04g074300.3 5896 9865 8182 6427 8913 8268 8297 9728 6998 5868 5545 7578 11737 10193 6934 40S ribosomal protein S2 (AHRD V3.3 *** A0A2G2ZPD5_CAPAN) AT2G41840 Solyc04g074310.4 76 1095 1289 1042 1942 2025 2226 1602 602 310 1021 706 180 460 204 RNA-binding protein 38-like (AHRD V3.3 *** A0A2I4HAQ4_9ROSI) AT1G78260 Solyc04g074320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 *** A0A200QUS8_9MAGN) AT1G34790 Solyc04g074330.3 2 9 6 10 0 2 6 1 6 4 6 0 9 0 25 Glycosyltransferase (AHRD V3.3 *** A0A077EMP8_ACTDE) Solyc04g074340.3 0 1 35 9 0 9 7 1 1 7 0 11 0 11 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4GJQ3_9ROSI) Solyc04g074350.3 21 17 5 6 0 0 0 1 0 7 0 0 4 15 5 Glycosyltransferase (AHRD V3.3 *** A0A2G3CNS7_CAPCH) AT1G22380 Solyc04g074360.3 0 0 0 0 4 1 1 0 0 0 0 0 0 0 11 Glycosyltransferase (AHRD V3.3 *** A0A2G3CNS7_CAPCH) AT1G22380 Solyc04g074370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2G3CNS7_CAPCH) Solyc04g074380.4 59 145 64 187 377 210 194 414 109 102 43 118 257 129 103 Glycosyltransferase (AHRD V3.3 *** A0A2G3CNS7_CAPCH) AT1G22380 Solyc04g074390.3 14 66 38 69 154 164 124 144 75 23 47 25 142 76 52 Glycosyltransferase (AHRD V3.3 *** A0A2G3CNS7_CAPCH) AT1G22380 Solyc04g074400.1 266 58 13 11 13 2 3 0 23 91 50 3 3 35 38 Protein EXORDIUM (AHRD V3.3 *-* A0A2G3CNT1_CAPCH) Solyc04g074410.2 2010 2241 7772 1266 2291 2342 2323 1729 2793 1141 9076 1713 962 1146 1189 Protein EXORDIUM-like 1 (AHRD V3.3 *** A0A2G2ZQI6_CAPAN) AT4G08950 Solyc04g074420.1 126 85 423 38 25 11 19 6 41 24 605 82 68 47 139 Protein EXORDIUM-like 1 (AHRD V3.3 *-* A0A2G2WZY1_CAPBA) Solyc04g074430.2 355 286 350 90 80 19 18 19 87 103 463 287 191 58 233 Protein EXORDIUM-like 1 (AHRD V3.3 *-* A0A2G2ZQI6_CAPAN) Solyc04g074440.1 847 584 1009 130 17 33 24 19 71 94 2166 345 394 165 523 Protein EXORDIUM-like 1 (AHRD V3.3 *** A0A2G2ZQI6_CAPAN) AT4G08950 Solyc04g074450.1 1178 677 2202 278 54 104 87 42 300 167 3961 608 633 362 613 Protein EXORDIUM-like 1 (AHRD V3.3 *** A0A2G2ZQI6_CAPAN) AT4G08950 Solyc04g074460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g074470.1 173 337 251 201 17 14 10 7 283 229 605 232 142 166 334 Protein EXORDIUM-like 2 (AHRD V3.3 *** A0A2G3CNT3_CAPCH) Solyc04g074480.3 2355 4346 3309 3288 3287 2831 2912 3652 5706 6382 3323 4089 4760 4948 4011 DAHP synthase 2 precursor AT1G22410 Solyc04g074490.3 719 604 1835 705 566 657 636 587 757 1221 815 625 694 724 805 F-box protein (AHRD V3.3 *** A0A2G3CNQ6_CAPCH) AT1G78280 Solyc04g074500.3 868 747 660 565 794 578 653 681 777 513 671 534 980 877 595 Protein kinase (AHRD V3.3 *** Q40264_MESCR) Solyc04g074510.3 1959 4281 3043 3245 5364 4668 4748 4710 3154 2474 2777 2827 3908 3687 2864 tft3 14-3-3 AT1G35160 Solyc04g074520.1 2736 1561 1208 1737 1245 1141 1363 1114 699 1786 1703 1057 1420 1133 1117 VQ motif-containing protein 9 (AHRD V3.3 *** A0A2I4DH74_9ROSI) AT1G78310 Solyc04g074530.3 74 31 31 44 11 4 3 3 12 16 20 4 30 29 22 Alcohol dehydrogenase-like 1 (AHRD V3.3 *** A0A2G3CNR0_CAPCH) AT1G22430 Solyc04g074535.1 0 4 0 0 0 1 0 2 0 3 0 1 2 4 0 Alcohol dehydrogenase-like 7 (AHRD V3.3 *** A0A2G2WZQ5_CAPBA) AT1G22430 Solyc04g074550.4 1330 2598 2434 2144 1934 1826 1898 1962 1918 1626 1975 1674 2985 2362 2355 Cytochrome c oxidase subunit (AHRD V3.3 *-* B6UF31_MAIZE) AT1G22450 Solyc04g074560.1 725 903 1019 669 657 865 883 768 614 422 624 667 718 932 554 GLABROUS1 enhancer-binding protein-like (AHRD V3.3 *-* XP_004237939.1) Solyc04g074570.1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 Unknown protein Solyc04g074580.1 6200 8390 8125 6042 6161 6200 5709 6707 6787 7037 8557 7936 7505 8746 6472 Histone H3 (AHRD V3.3 *** A0A2K1J132_PHYPA) AT4G40040 Solyc04g074620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aquaporin TIP1-2 (AHRD V3.3 *-* A0A2G3DCK0_CAPCH) Solyc04g074630.4 372 357 331 331 327 290 366 280 279 243 246 240 398 396 354 Serine--tRNA ligase (AHRD V3.3 *** A0A2G2WZW7_CAPBA) AT1G11870 Solyc04g074640.4 96 452 577 480 1558 1570 1709 1322 626 387 683 539 106 278 424 Ascorbate peroxidase (AHRD V3.3 *** A0A0K2SS60_CITUN) AT4G09010 Solyc04g074650.2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5 Unknown protein Solyc04g074660.3 104 57 52 53 101 102 109 73 71 43 83 57 79 103 115 folate-sensitive fragile site protein (AHRD V3.3 *** AT4G15030.3) AT4G15030 Solyc04g074670.4 753 580 492 616 540 489 514 533 546 573 454 542 574 700 627 O-fucosyltransferase (AHRD V3.3 *** A0A2P5D9T8_TREOI) AT1G22460 Solyc04g074680.1 66 13 63 4 0 0 0 0 4 3 125 0 23 40 39 chromodomain-helicase-DNA-binding protein 9-like (AHRD V3.3 --* XP_021604423.1) AT1G22470 Solyc04g074690.3 1247 1161 1363 1123 1084 1159 954 877 634 846 1020 805 1182 1085 1243 Mitochondrial ribosomal protein L27 (AHRD V3.3 *** B6TVY0_MAIZE) AT5G39800 Solyc04g074700.4 639 1073 1216 1160 647 584 594 569 1519 697 1471 505 1157 746 855 LES17306 homeodomain protein Solyc04g074710.3 30 101 118 90 140 129 174 123 63 88 109 74 76 90 94 Queuine tRNA-ribosyltransferase (AHRD V3.3 *** S8D4U6_9LAMI) Solyc04g074720.3 458 444 437 405 480 537 491 555 565 631 402 568 329 447 560 FAM91 carboxy-terminus protein (AHRD V3.3 *** AT1G35220.3) AT1G35220 Solyc04g074730.1 16617 13040 20296 10995 12479 11521 11291 11099 7175 17201 19212 12180 7299 9174 14818 classical arabinogalactan protein 5 (AHRD V3.3 --* XP_004237948.1) Solyc04g074740.4 7 127 123 97 39 31 29 37 134 407 176 117 127 127 281 Blue copper protein (AHRD V3.3 *** A0A2G2ZQN6_CAPAN) AT1G72230 Solyc04g074750.3 221 330 318 440 423 403 411 426 268 323 257 399 315 331 385 RNA-binding protein CP33, chloroplastic (AHRD V3.3 *** A0A1J3ILT8_NOCCA) AT4G09040 Solyc04g074760.3 325 232 348 381 565 579 387 568 349 375 345 483 173 231 282 hypothetical protein (AHRD V3.3 *** AT4G09060.1) AT4G09060 Solyc04g074770.2 91 722 696 460 850 993 1034 950 923 1160 768 904 578 602 241 Unknown protein Solyc04g074780.4 9 13 10 15 4 2 0 2 11 14 44 6 12 23 0 Plastid-targeted protein 3 (AHRD V3.3 *-* Q9ARH3_CRAPL) Solyc04g074790.3 26 11 0 3 0 0 2 0 2 1 4 5 14 23 51 RING/U-box superfamily protein (AHRD V3.3 *-* F4JJ02_ARATH) AT1G72220 Solyc04g074800.3 1011 1119 1621 1352 1321 1394 1468 1228 1211 888 1272 1215 1358 1396 1652 craniofacial development protein 1 (AHRD V3.3 *** A0A2I4E4C8_9ROSI) AT5G30490 Solyc04g074810.4 40 293 340 245 669 638 727 670 372 145 109 276 458 331 134 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1PPA1_ARTAN) AT1G72210 Solyc04g074820.3 55 64 43 93 43 29 40 24 54 35 56 17 73 46 92 RING/U-box superfamily protein (AHRD V3.3 *** A0A2H1ZED7_ARATH) AT1G22500 Solyc04g074830.1 543 465 500 273 318 216 214 291 141 378 1011 354 235 298 689 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** A0A2U1QGP5_ARTAN) Solyc04g074840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A218X5P1_PUNGR) Solyc04g074850.3 95 164 96 105 70 55 75 88 133 146 53 58 314 105 138 ripening regulated protein DDTFR18 Solyc04g074860.4 114 200 213 222 241 286 306 285 249 209 237 334 154 227 320 Protein DETOXIFICATION (AHRD V3.3 *** A0A1Q3CSX6_CEPFO) Solyc04g074865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc04g074870.3 213 157 156 212 106 81 97 66 180 346 234 148 151 172 221 Purine permease 3 (AHRD V3.3 *** A0A1U8GDH3_CAPAN),Pfam:PF16913 Solyc04g074880.2 19 6 3 12 8 12 20 20 8 3 4 41 15 31 39 purine permease 3-like (AHRD V3.3 *** A0A2G2ZQS5_CAPAN),Pfam:PF16913 Solyc04g074890.2 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 Unknown protein Solyc04g074900.3 61 95 123 143 155 138 183 122 69 56 171 140 64 103 140 40S ribosomal protein S21 (AHRD V3.3 *** A0A1U8F4M1_CAPAN) AT5G27700 Solyc04g074910.3 2382 2540 3510 2714 3264 3362 3835 2774 1821 1929 2749 2423 2561 2237 2637 40S ribosomal protein S21 (AHRD V3.3 *** A0A1U8F4M1_CAPAN) AT5G27700 Solyc04g074920.2 7 13 2 29 0 2 1 0 14 9 3 26 5 11 0 Glycosyltransferase AER61 (AHRD V3.3 *** A0A200QXY3_9MAGN) Solyc04g074925.1 0 2 0 5 0 0 0 0 0 0 1 1 2 0 0 Unknown protein Solyc04g074930.4 0 6 0 0 0 0 0 3 0 0 1 1 0 0 0 Glycosyltransferase AER61 (AHRD V3.3 *** A0A200QXY3_9MAGN) Solyc04g074940.4 170 157 268 149 158 170 187 128 129 185 247 169 209 189 201 Target SNARE coiled-coil-like domain-containing protein (AHRD V3.3 *** A0A2U1KSY6_ARTAN) AT4G14600 Solyc04g074950.3 142 156 432 126 84 90 73 65 123 269 477 156 176 131 75 Dihydrofolate reductase (AHRD V3.3 *** A0A1P8B8P6_ARATH) AT4G24380 Solyc04g074960.4 161 135 163 148 111 81 97 84 129 82 166 88 236 157 219 Dihydrofolate reductase (AHRD V3.3 *** A0A1P8B8P6_ARATH) AT4G24380 Solyc04g074963.1 92 114 141 98 83 75 102 54 93 115 126 80 137 103 220 Unknown protein Solyc04g074967.1 4 3 7 2 9 3 2 6 0 4 11 4 6 2 7 Unknown protein Solyc04g074980.3 3656 3028 3089 3065 3212 3711 3225 3098 2937 3911 3242 2944 2806 2558 2556 Transport inhibitor response 1-like protein (AHRD V3.3 *** A0A2G3CNZ5_CAPCH) AT5G49980 Solyc04g074990.3 2465 5314 4528 5701 9594 8767 9582 8574 3400 2481 3233 5167 4083 4729 1895 Zinc-finger homeodomain protein 1 (AHRD V3.3 *** A0A2G2X027_CAPBA) Solyc04g075000.1 87 324 526 397 758 785 819 604 408 189 424 445 374 364 192 Serine/threonine-protein kinase-like protein (AHRD V3.3 *** A0A2G3CNY7_CAPCH) AT1G28390 Solyc04g075010.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc04g075012.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g075014.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g075016.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g075018.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g005210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g076010.3 1861 1019 600 869 713 749 660 476 471 601 930 535 947 736 1677 zinc ion-binding protein (AHRD V3.3 *-* AT1G02070.1) Solyc04g076020.3 490 410 462 435 362 366 334 408 513 472 448 521 543 463 452 WD40 repeat (AHRD V3.3 *** A0A200PUB7_9MAGN) AT5G10940 Solyc04g076030.3 1827 1683 1627 1636 2250 2548 2631 2302 1785 1449 1789 1523 1305 1852 1955 transcription factor bHLH143-like (AHRD V3.3 *** A0A2I4FQB9_9ROSI) AT5G09460 Solyc04g076033.1 182 142 211 174 301 248 269 315 245 204 174 196 132 172 231 Myc-type, basic helix-loop-helix (BHLH) domain-containing protein (AHRD V3.3 *-* A0A2U1NNA1_ARTAN) AT5G50011 Solyc04g076037.1 118 150 87 118 229 159 171 280 150 170 109 163 75 115 122 Unknown protein Solyc04g076040.3 250 556 532 506 716 840 928 749 487 285 497 456 466 461 317 cyclinD5_1 AT2G22490 Solyc04g076050.4 410 595 742 690 664 795 769 664 701 438 582 617 549 617 745 Divalent-cation tolerance protein CutA (AHRD V3.3 *** A0A1M5JAL0_PECCA) AT2G33740 Solyc04g076060.3 2176 2232 1905 1988 2657 2661 2580 3267 2187 2183 2037 2463 2696 2456 1694 tft10 AT5G65430 Solyc04g076070.1 421 428 519 444 549 451 445 504 460 370 469 443 446 477 367 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2X037_CAPBA) AT5G18475 Solyc04g076080.3 420 418 466 562 640 676 604 555 448 454 627 555 546 582 443 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G3CNY2_CAPCH) AT2G33735 Solyc04g076090.3 534 1102 949 1070 1433 1359 1459 1335 1463 1045 891 1270 1260 1224 790 glucose-6-phosphate isomerase AT4G24620 Solyc04g076100.4 494 1060 994 1120 1496 1545 1442 1792 1342 1029 1036 1420 645 928 655 transmembrane protein (AHRD V3.3 *** AT5G65440.7) AT4G24610 Solyc04g076110.4 1122 712 955 741 658 712 745 654 711 930 1045 643 864 730 757 RING finger protein (AHRD V3.3 *** Q0WP38_ARATH) AT5G49710 Solyc04g076120.3 37 49 50 55 62 105 92 72 62 59 48 90 51 78 54 Serine carboxypeptidase-like 17 (AHRD V3.3 *-* A0A2G2W4M1_CAPBA) Solyc04g076130.3 11 20 9 14 19 18 23 21 16 18 50 17 21 12 16 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3JSD4_TRIPR) Solyc04g076140.3 120 215 395 380 565 655 609 623 425 289 424 679 375 443 352 Rho GTPase-activating protein REN1 (AHRD V3.3 *** A0A2G2X0E2_CAPBA) AT4G24580 Solyc04g076150.3 0 7 2 0 0 0 1 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT1G58120.1) AT1G58120 Solyc04g076155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g076170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance protein (AHRD V3.3 *-* A0A2U1LYL9_ARTAN) Solyc04g076180.4 1748 1900 1511 1460 1613 1673 1623 1772 1700 1372 1104 1407 1730 1904 1383 ATPase family AAA domain-containing protein (AHRD V3.3 *** A0A2G3CP11_CAPCH) AT1G05910 Solyc04g076190.1 80 2715 912 1615 2903 2016 2373 2819 682 390 697 754 177 680 271 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** F4K5B9_ARATH) AT1G09750 Solyc04g076200.3 518 298 487 503 368 385 473 332 566 485 523 434 299 365 575 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** Q84TF6_ARATH) AT1G09740 Solyc04g076210.3 3112 2430 2512 2419 2171 2470 2400 2343 2597 2464 2602 2517 2586 2814 2731 Ubiquitin carboxyl-terminal hydrolase 16 (AHRD V3.3 *** A0A2G2ZQX4_CAPAN) AT4G24560 Solyc04g076220.3 3051 1898 1579 1681 976 866 650 834 1101 2474 1430 1003 826 1112 537 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A1U8GD78_CAPAN) AT5G49700 Solyc04g076230.3 1067 1569 1336 1493 1871 1698 1725 1886 1660 1301 1133 1606 1755 1565 1264 AP-4 complex subunit mu (AHRD V3.3 *** A0A1U8GCJ3_CAPAN) AT4G24550 Solyc04g076240.3 42 46 90 123 31 48 29 37 39 56 13 48 6 47 14 bHLH transcription factor 033 Solyc04g076250.3 401 479 492 402 505 507 399 428 519 360 439 476 636 608 567 ADP-ribosylation factor-like protein 6-interacting protein 4 isoform X2 (AHRD V3.3 *** XP_010320203.1) Solyc04g076260.2 67 134 122 71 103 112 107 94 75 36 65 93 119 117 114 thionin-like protein (AHRD V3.3 *** AT5G64816.4) Solyc04g076270.1 1656 1450 1091 1078 1486 1301 1103 1577 1441 1586 1197 1631 1296 1218 1067 DnaJ domain-containing protein (AHRD V3.3 *** A0A1Q3BFQ6_CEPFO) AT2G01710 Solyc04g076280.4 389 479 389 289 627 626 581 680 599 368 608 456 653 589 651 MADS-box protein SVP (AHRD V3.3 *** A0A2G3CP45_CAPCH) Solyc04g076290.3 508 496 427 415 432 448 423 560 479 485 331 511 438 430 508 O-fucosyltransferase (AHRD V3.3 *** A0A2P5EGU4_TREOI) AT4G24530 Solyc04g076300.4 1427 906 1126 904 1101 1237 1044 1019 1133 2022 2186 1209 740 987 1221 Mechanosensitive ion channel protein 2, chloroplastic (AHRD V3.3 *** A0A2G2X028_CAPBA) AT1G58200 Solyc04g076310.4 120 782 749 877 1461 1499 1496 1942 1041 547 744 1073 271 617 297 Kinesin-like protein FRA1 (AHRD V3.3 *** A0A2G2ZQX3_CAPAN) AT5G60930 Solyc04g076320.4 605 1107 794 909 1016 916 1029 912 853 789 924 872 1460 1168 785 Argininosuccinate lyase (AHRD V3.3 *** A0A2G3CP16_CAPCH) AT5G10920 Solyc04g076330.3 72 97 50 101 75 103 69 103 72 63 26 83 67 95 47 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QD05_9MAGN) Solyc04g076340.3 748 275 543 445 330 475 387 241 375 348 621 379 269 304 752 hypothetical protein (AHRD V3.3 *-* AT4G38060.4) AT5G65480 Solyc04g076350.1 4 0 4 0 0 0 0 0 0 1 0 0 0 0 2 Kinase interacting (KIP1-like) family protein (AHRD V3.3 *-* A0A2U1KWG5_ARTAN) Solyc04g076360.4 966 587 654 528 402 404 457 391 521 464 734 568 652 665 687 Homeodomain-like superfamily protein (AHRD V3.3 *-* AT1G09710.4) AT1G09710 Solyc04g076370.4 93 129 159 114 113 161 132 102 100 106 121 136 85 125 144 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2X056_CAPBA) AT2G27800 Solyc04g076380.4 12078 7529 6537 6599 5204 5164 5421 5708 7274 8286 6505 7368 4939 5768 6714 NADPH--cytochrome P450 reductase (AHRD V3.3 *** A0A2G3CP38_CAPCH) AT4G24520 Solyc04g076390.3 561 603 576 596 686 685 790 617 603 450 709 638 605 683 850 Cysteine--tRNA ligase (AHRD V3.3 *** A0A1J3GNV7_NOCCA) AT2G31170 Solyc04g076400.3 88 407 839 676 1136 1435 1241 1185 738 342 790 746 330 603 405 VIN3-like protein 3 (AHRD V3.3 *** A0A2G3CP98_CAPCH) Solyc04g076410.3 660 486 671 562 494 576 533 452 411 425 601 463 516 564 622 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* AT4G24500.3) AT4G24500 Solyc04g076420.4 486 724 519 610 735 711 676 668 666 487 586 686 746 819 668 dsRNA-binding protein Solyc04g076430.3 711 892 786 686 986 853 840 894 760 699 690 769 930 837 620 Geranylgeranyl transferase type-2 subunit alpha-like (AHRD V3.3 *** A0A2K3NW86_TRIPR) AT4G24490 Solyc04g076440.1 1 4 2 6 0 0 1 0 11 20 1 5 23 5 2 hypothetical protein (AHRD V3.3 --* AT1G58225.1) Solyc04g076450.1 1104 558 1079 825 494 692 792 388 399 447 852 453 555 713 1022 LRR receptor-like serine/threonine-protein kinase GSO1 (AHRD V3.3 *** A0A1U8F0D9_CAPAN) Solyc04g076460.4 574 303 475 467 216 385 350 260 275 273 377 243 309 485 510 LRR receptor-like serine/threonine-protein kinase GSO1 (AHRD V3.3 *** A0A1U8F0D9_CAPAN) Solyc04g076470.1 427 357 334 256 383 395 345 372 367 396 342 334 442 421 204 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1N5R2_ARTAN) AT5G65520 Solyc04g076480.3 112 74 88 58 28 26 21 22 54 30 39 29 54 71 83 MAP kinase kinase kinase 34 AT4G24480 Solyc04g076500.4 126 196 174 142 207 160 190 225 279 216 77 199 111 203 197 BEACH domain (AHRD V3.3 *-* A0A200PNF4_9MAGN) Solyc04g076510.3 2232 1913 1832 2199 1361 1716 1866 1418 1780 1797 1997 1496 1680 1980 2483 BEACH domain (AHRD V3.3 *** A0A200PNF4_9MAGN) AT1G58230 Solyc04g076520.3 409 618 596 508 776 739 748 656 779 504 671 589 671 711 567 F-box protein (AHRD V3.3 *** A0A2I0XAX9_9ASPA) AT5G39450 Solyc04g076523.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MMG0_TRIPR) Solyc04g150168.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3LHU3_TRIPR) Solyc04g076530.3 1208 473 509 526 306 384 422 346 443 536 678 424 497 524 735 GATA transcription factor 28 (AHRD V3.3 *** A0A2G3CP85_CAPCH) Solyc04g076540.4 1500 1036 1426 1431 798 963 1026 692 1402 1107 1480 1076 1271 1491 1723 HYPERSENSITIVE TO PI STARVATION 4 (AHRD V3.3 *** F4I9T6_ARATH) AT1G58250 Solyc04g076550.3 71 43 126 20 37 32 55 75 102 56 43 61 23 48 35 HYPERSENSITIVE TO PI STARVATION 4 (AHRD V3.3 *-* AT1G58250.1) Solyc04g076560.3 885 734 672 470 544 478 547 487 554 379 475 476 800 690 636 Sas10/Utp3/C1D (AHRD V3.3 *** A0A200PUG2_9MAGN) AT1G07840 Solyc04g076570.4 180 236 298 247 244 288 344 163 217 209 237 311 247 307 247 CRT (Chloroquine-resistance transporter)-like transporter (AHRD V3.3 *** A0A1Y1I3N1_KLENI) AT4G24460 Solyc04g076580.4 546 388 590 540 459 524 493 396 398 457 502 495 372 459 518 Transcription initiation factor TFIID subunit 7 (AHRD V3.3 *** A0A2G2ZQG9_CAPAN) AT1G55300 Solyc04g076590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g076600.3 2 1 17 13 2 5 7 0 9 16 0 13 23 13 13 CHCH domain-containing protein (AHRD V3.3 *** A0A1Q3BNW5_CEPFO) Solyc04g076610.3 756 508 1141 551 470 468 392 387 618 1197 1097 494 1047 681 561 Ribonuclease H (AHRD V3.3 *** A0A2K3N9F8_TRIPR) Solyc04g076620.4 5574 5099 3925 4545 4638 4435 4842 5654 6303 6309 3844 5279 4027 5033 4207 E3 ubiquitin-protein ligase UPL2 (AHRD V3.3 *** A0A2G2X032_CAPBA) Solyc04g076630.3 80 60 236 185 174 283 188 240 76 70 62 213 11 64 110 Rhamnogalacturonate lyase (AHRD V3.3 *** A0A200QXQ6_9MAGN) Solyc04g076640.3 4 7 13 14 3 11 17 1 8 12 21 10 3 12 30 Rhamnogalacturonate lyase (AHRD V3.3 *** A0A200QXQ6_9MAGN) AT1G09890 Solyc04g076650.2 0 0 0 0 0 0 1 0 3 0 0 8 0 1 0 Rhamnogalacturonate lyase (AHRD V3.3 *** A0A200QXQ6_9MAGN) AT1G09910 Solyc04g076660.3 220 138 304 229 34 49 58 51 227 225 409 170 247 231 776 Rhamnogalacturonate lyase family protein (AHRD V3.3 *** A0A2U1NT41_ARTAN) AT1G09910 Solyc04g076670.3 1953 1049 1361 1231 974 794 788 643 1032 1384 1538 942 1176 1195 2044 TRAF-type zinc finger domain-containing protein 1 (AHRD V3.3 *** A0A1J3IY71_NOCCA) AT1G09920 Solyc04g076680.2 93 55 46 79 13 9 9 10 22 49 44 12 57 64 33 MADS box transcription factor AGAMOUS (AHRD V3.3 *-* A0A1Q1NK16_PAELC) AT2G26320 Solyc04g076690.4 173 112 337 199 47 61 109 17 273 145 1088 267 92 292 1704 Unknown protein Solyc04g076720.3 139 113 333 413 160 199 245 134 198 215 343 225 295 287 459 autophagy-related protein 18a-like (AHRD V3.3 *-* A0A2I4FUZ0_9ROSI) Solyc04g076730.1 14 8 0 6 4 4 10 3 0 5 3 2 2 12 8 Unknown protein Solyc04g076740.3 805 822 868 726 903 959 848 1002 605 701 698 828 634 649 631 Protein TIC 20-I, chloroplastic (AHRD V3.3 *** A0A2G2X086_CAPBA) AT1G04940 Solyc04g076750.2 0 1 1 5 5 11 19 14 2 2 0 1 0 1 0 Oligopeptide transporter (AHRD V3.3 *** A0A200QXQ7_9MAGN) AT1G09930 Solyc04g076760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Oligopeptide transporter (AHRD V3.3 *** A0A200QXQ7_9MAGN) Solyc04g076770.3 0 0 0 2 0 0 0 0 0 0 5 0 0 0 0 Peroxidase (AHRD V3.3 *** K4BUB5_SOLLC) AT1G44970 Solyc04g076780.4 841 769 552 689 705 603 485 825 950 779 919 692 502 770 609 Oligopeptide transporter (AHRD V3.3 *** A0A200QXQ7_9MAGN) AT5G64410 Solyc04g076790.3 578 1504 1263 1249 1856 1693 1748 1877 1783 1091 1378 1262 1336 1331 1845 Serine hydroxymethyltransferase (AHRD V3.3 *** A0A2G2ZR28_CAPAN) Solyc04g076800.3 58 126 101 94 113 112 120 95 90 47 80 80 70 126 114 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QXT4_9MAGN) Solyc04g076810.4 945 766 780 641 502 540 600 616 677 617 701 632 878 856 1200 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G3CPB2_CAPCH) AT4G24400 Solyc04g076820.1 5459 2865 1339 2149 1770 1409 1358 1771 2559 2284 1307 1933 2741 2867 5408 Phox/Bem1p (AHRD V3.3 *** A0A200QI01_9MAGN) Solyc04g076830.4 300 157 124 220 96 52 85 64 106 143 78 79 182 197 400 Phosphoglycerate mutase-like protein (AHRD V3.3 *** Q8LGT8_SOYBN) AT5G64460 Solyc04g076840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g076845.1 114 430 361 354 654 629 553 574 446 300 559 366 189 324 256 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1PS36_ARTAN) AT5G65640 Solyc04g076850.3 5278 7740 6705 6808 10117 11111 10083 10643 9658 6278 6860 7182 5547 6615 5189 entire AT5G65670 Solyc04g076860.3 1405 2395 1764 1369 2129 2264 1895 2318 2526 2386 1678 1944 1481 1641 1199 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *** A0A2K3NFC1_TRIPR) AT5G49665 Solyc04g076870.4 1193 1847 808 1504 3041 2878 3248 2907 1904 2578 1305 1553 1320 827 1147 Glutamyl-tRNA reductase (AHRD V3.3 *** A6Q0F0_TOBAC) Solyc04g076880.3 2277 2483 2298 2275 2240 1959 2160 2456 2765 3035 2406 2075 2149 2916 2287 phosphoenolpyruvate carboxykinase AT4G37870 Solyc04g076890.4 807 1130 1374 1100 1832 1608 1617 1451 1268 1164 1370 1274 1173 1037 1103 Ubiquitin-fold modifier-conjugating enzyme 1 (AHRD V3.3 *** A0A1U8GCD0_CAPAN) AT1G27530 Solyc04g076900.2 137 143 81 73 105 146 114 147 135 139 63 127 71 113 88 Symplekin (AHRD V3.3 *-* F4HSZ1_ARATH) AT1G27590 Solyc04g076910.3 1848 1751 1072 1289 1451 1562 1630 1690 1050 1386 1089 1495 1513 1533 930 HEAT (AHRD V3.3 *** A0A200QA60_9MAGN) AT1G27595 Solyc04g076920.3 355 354 381 346 258 294 364 267 345 291 311 263 295 320 238 beta3-glucuronyltransferase AT1G27600 Solyc04g076940.3 436 248 130 169 131 129 116 76 134 197 158 144 162 196 201 Unknown protein Solyc04g076950.3 214 209 123 290 169 166 98 157 283 560 374 324 94 90 165 Protein DETOXIFICATION (AHRD V3.3 *** A0A1Q3ASA7_CEPFO) AT1G58340 Solyc04g076960.4 243 330 333 409 197 237 270 276 353 443 392 373 376 341 408 SlSUT4,Pfam:PF13347 AT1G09960 Solyc04g076970.3 1 9 16 8 1 0 0 0 1 4 3 3 0 5 0 Transcription factor (AHRD V3.3 *** A0A2U1NHT6_ARTAN) AT1G09950 Solyc04g076980.3 1039 502 386 284 61 31 10 58 393 1209 498 236 218 258 223 Receptor-like protein kinase (AHRD V3.3 *-* A0A2R6RNH0_ACTCH) Solyc04g076990.3 1770 797 915 525 47 51 67 77 562 1331 1427 271 525 633 793 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6RNH0_ACTCH) Solyc04g077000.3 311 149 114 139 141 150 115 146 165 258 147 148 183 147 195 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CPC1_CAPCH) Solyc04g077010.4 1577 895 872 1399 251 188 183 185 558 1113 632 324 940 763 1513 Receptor-like protein kinase haiku2 (AHRD V3.3 *** A0A1J6JYR4_NICAT) AT5G49660 Solyc04g077020.3 24492 40186 33640 36223 35600 33352 36221 35141 41076 28931 41844 36441 28241 35332 52883 Tubulin alpha chain (AHRD V3.3 *** A0A1U8GD16_CAPAN) AT4G14960 Solyc04g077030.3 404 165 123 118 78 67 86 78 44 77 72 95 116 216 188 Xylulose kinase (AHRD V3.3 *** A0A2G2X084_CAPBA) Solyc04g077040.3 404 512 450 706 601 605 654 591 756 549 440 556 492 568 639 Xylulose kinase (AHRD V3.3 *** A0A2G2X084_CAPBA) AT5G49650 Solyc04g077050.3 1046 1036 971 1409 685 549 535 550 904 898 599 348 1976 1843 1097 Amino acid permease 6 (AHRD V3.3 *** A0A2G2ZR10_CAPAN) AT5G49630 Solyc04g077060.3 2357 2756 1881 1843 2092 1929 1968 2382 2013 2489 1590 2488 2325 2487 1672 KH domain-containing protein (AHRD V3.3 *** A0A2I0WKQ9_9ASPA) Solyc04g077110.3 17 0 6 9 14 20 16 16 10 12 8 3 5 13 25 Unknown protein Solyc04g077120.4 946 580 786 611 604 655 783 646 529 769 672 678 515 464 672 Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** A0A1U8GD06_CAPAN) AT4G08170 Solyc04g077130.1 193 861 1017 715 988 1042 1141 1020 673 345 793 676 586 788 789 50S ribosomal protein 6, chloroplastic (AHRD V3.3 *** A0A2G3CPG8_CAPCH) AT5G17870 Solyc04g077140.3 294 451 858 464 841 1005 960 1016 734 343 1012 600 529 576 156 DUF1005 domain-containing protein (AHRD V3.3 *** A0A1Q3BZI1_CEPFO) AT1G10020 Solyc04g077150.3 184 843 476 779 1174 1262 1256 717 764 697 997 1168 660 1030 606 Ergosterol biosynthetic protein 28 (AHRD V3.3 *** A0A1U8GD02_CAPAN) AT1G10030 Solyc04g077160.1 112 553 598 384 849 1088 976 762 574 185 584 345 295 485 471 myb-like protein X (AHRD V3.3 --* AT4G33740.5) Solyc04g077170.3 108 183 127 148 255 297 354 251 215 75 152 170 188 182 107 Epidermal patterning factor-like protein (AHRD V3.3 *** A0A2U1PBB6_ARTAN),Pfam:PF17181 AT4G37810 Solyc04g077180.3 52 78 112 81 66 66 130 100 74 66 80 50 72 95 83 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q08A69_ARATH) Solyc04g077190.4 91 219 224 178 274 247 374 306 242 190 276 249 132 191 270 Endo-1,4-beta-xylanase 1 (AHRD V3.3 *** XYN1_ARATH) AT1G58370 Solyc04g077210.3 615 1628 1624 971 3208 2867 2918 3057 2460 799 1558 1919 1555 1298 1043 Knotted 1 AT4G08150 Solyc04g077220.3 33 13 18 67 0 1 0 0 11 14 22 6 34 39 169 Homeobox-leucine zipper protein HAT22 (AHRD V3.3 *** A0A2G3CPE7_CAPCH) Solyc04g077230.1 437 259 454 207 77 38 38 40 149 289 476 99 416 238 259 Unknown protein Solyc04g077240.4 0 0 0 0 0 0 0 0 0 1 0 2 0 0 3 SlBCAT6 Solyc04g150169.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc04g077250.4 5 0 0 0 0 0 0 5 0 0 0 0 0 0 0 Branched-chain-amino-acid aminotransferase (AHRD V3.3 *** Q94CF8_CAPAN) AT1G10070 Solyc04g077260.3 15 20 29 4 0 1 0 0 1 5 0 0 8 3 14 blind-like3 Solyc04g077270.4 281 156 185 52 8 12 4 14 192 157 373 30 228 139 106 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A1U8GJN2_CAPAN) Solyc04g077280.3 245 152 89 61 21 29 25 38 60 58 116 61 81 84 78 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2X0B3_CAPBA) Solyc04g077290.3 263 422 543 358 459 499 455 426 388 337 352 385 389 469 410 Transcription initiation factor TFIID subunit 14b (AHRD V3.3 *** A0A1J3FED9_NOCCA) AT5G45600 Solyc04g077300.3 43 4 0 0 0 0 0 0 1 9 2 0 11 16 4 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3CPG9_CAPCH) Solyc04g077310.3 264 103 30 56 15 4 5 14 44 106 46 71 52 67 56 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3CPF9_CAPCH) Solyc04g077320.2 3 2 0 8 0 0 0 3 1 0 1 0 0 2 8 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3BAY7_CAPCH) Solyc04g077330.4 8 0 1 7 0 0 0 0 2 1 0 0 5 9 20 Receptor protein kinase (AHRD V3.3 *-* Q40096_IPOTF) Solyc04g077340.3 20 8 30 46 0 0 1 0 34 36 58 1 17 35 88 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2WZR9_CAPBA) Solyc04g077350.1 112 129 188 105 155 145 143 99 115 91 193 160 120 178 62 Unknown protein Solyc04g077360.3 72 34 22 14 0 0 0 0 12 15 16 4 30 45 23 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2WZY5_CAPBA) Solyc04g077370.2 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3CPH9_CAPCH) Solyc04g077380.2 3 11 7 1 17 5 32 27 4 10 11 2 2 10 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A1U8GCX8_CAPAN) Solyc04g077400.4 9 7 9 12 10 7 13 8 7 10 34 14 6 14 17 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *** A0A1P8B4I8_ARATH) AT1G10090 Solyc04g077390.3 264 68 45 74 15 11 1 3 31 31 104 0 136 155 118 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3CPH2_CAPCH) Solyc04g077410.4 85 105 23 122 24 50 26 26 78 137 76 53 17 35 23 1-aminocyclopropane-1-carboxylate synthase 5 Solyc04g077420.4 173 284 242 309 339 273 257 264 265 175 207 251 257 309 218 transmembrane protein (AHRD V3.3 *** AT3G49720.3) Solyc04g077430.4 220 306 322 228 241 304 279 223 268 206 318 250 389 356 344 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G2X0H1_CAPBA) AT4G07990 Solyc04g077440.4 2761 4624 3031 4404 3923 4478 4315 3927 7359 8548 6825 9711 4318 4097 4394 Squalene epoxidase (AHRD V3.3 *** Q8GSM8_MEDTR) Solyc04g077450.3 301 325 351 255 409 376 477 419 256 298 263 513 240 318 268 DNA binding protein (AHRD V3.3 *** AT3G12210.2) AT3G12210 Solyc04g077460.3 87 86 150 109 121 149 126 167 116 130 160 162 119 165 98 Amino acid transporter (AHRD V3.3 *** A0A200PPZ9_9MAGN) Solyc04g077470.3 556 1071 3252 1652 1938 2226 2365 1661 2043 1455 4252 1899 941 1056 1595 Cellulose synthase-like C4, glycosyltransferase family 2 (AHRD V3.3 *** A9TYJ5_PHYPA) AT4G07960 Solyc04g077480.3 453 626 715 605 965 969 873 876 756 580 775 697 891 719 585 bHLH transcription factor 034 AT1G10120 Solyc04g077490.3 3272 5698 6381 4315 8629 8668 8579 7992 7930 4513 6004 6503 6476 5971 3170 AP2-like ethylene-responsive transcription factor ANT (AHRD V3.3 *** A0A2G2Z848_CAPAN) AT4G37750 Solyc04g077500.4 1568 1201 788 1639 972 1158 992 1195 811 1632 768 882 799 827 794 transmembrane protein (AHRD V3.3 *** AT1G44920.1) AT1G44920 Solyc04g077510.4 12121 16704 17683 16507 14861 17554 15024 17595 23247 16216 14896 19645 16859 19619 12545 Growth-regulating factor 8 (AHRD V3.3 *** A0A2G2ZR93_CAPAN) AT2G22840 Solyc04g077520.3 754 451 615 572 518 500 476 501 469 543 403 602 551 542 370 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4JFN7_ARATH) AT1G58470 Solyc04g077530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g077535.1 12 51 27 27 41 50 36 35 35 29 23 22 12 9 36 DUF4378 domain-containing protein (AHRD V3.3 *** A0A1Q3ALK9_CEPFO) Solyc04g077540.4 317 623 474 659 942 978 855 1093 690 511 511 733 173 425 409 Kinesin-like protein (AHRD V3.3 *** A0A2G2ZR89_CAPAN) AT1G59540 Solyc04g077550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g077560.3 1413 968 1188 1094 868 983 1018 785 792 827 1136 982 950 1066 1154 CW7 (AHRD V3.3 *** AT1G59520.1) AT1G59520 Solyc04g077570.1 48 113 136 70 130 147 158 120 223 101 66 97 130 157 152 hypothetical protein (AHRD V3.3 *** AT4G10810.1) Solyc04g077580.3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 BnaC03g48770D protein (AHRD V3.3 *** A0A078HIB5_BRANA) Solyc04g077590.4 301 311 401 463 374 386 306 450 304 350 200 398 305 313 251 Protein PHLOEM PROTEIN 2-LIKE A10 (AHRD V3.3 *** A0A2G2X0I1_CAPBA) AT1G10150 Solyc04g077600.3 664 572 691 690 737 718 757 593 509 632 681 649 533 587 598 BSD domain-containing protein (AHRD V3.3 *** A0A1Q3AM20_CEPFO) AT1G10720 Solyc04g077610.4 461 501 681 673 754 864 833 843 621 463 902 696 468 492 610 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2ZR90_CAPAN) AT3G49810 Solyc04g077620.1 54 13 14 12 1 2 2 0 4 7 31 3 4 32 42 Uncharacterized conserved protein UCP031279 (AHRD V3.3 -** AT1G10140.1) AT1G10140 Solyc04g077630.3 36 9 23 9 1 3 2 0 7 8 24 8 21 16 27 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3MSK4_TRIPR) AT2G23000 Solyc04g077640.4 12 6 3 3 0 2 0 0 0 0 0 0 0 0 0 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3MSK4_TRIPR) AT2G23000 Solyc04g077650.3 328 118 102 76 83 89 105 110 34 88 41 64 176 121 43 Serine carboxypeptidase-like 17 (AHRD V3.3 *** A0A2G2ZRB2_CAPAN) AT2G23000 Solyc04g077660.3 1070 667 698 717 696 767 714 636 627 641 753 576 633 714 767 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G3CPM3_CAPCH) Solyc04g077670.3 173 870 331 589 1037 829 955 1216 1027 717 386 660 668 647 549 Serine carboxypeptidase-like 18 (AHRD V3.3 *** A0A2G3CPL7_CAPCH) AT2G23000 Solyc04g077680.3 1259 1226 1217 1045 1017 1018 1112 924 790 658 1004 953 1202 1209 1262 U3 small nucleolar RNA-associated protein 4 (AHRD V3.3 *** A0A2I4FQ80_9ROSI) AT4G07410 Solyc04g077690.3 171 188 143 180 146 137 172 97 306 193 224 158 107 90 149 hypothetical protein (AHRD V3.3 --* AT4G33800.2) Solyc04g077700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g077710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g077720.1 2 1 16 0 32 69 46 58 0 3 0 1 0 0 0 Nucleobase-ascorbate transporter 6-like protein (AHRD V3.3 *** A0A2K3MYP7_TRIPR) Solyc04g077730.1 0 0 2 0 12 6 1 11 0 1 0 0 3 0 0 Nucleobase-ascorbate transporter 6 (AHRD V3.3 *** A0A2G2ZRD6_CAPAN) Solyc04g077740.1 77 21 53 26 23 23 22 16 27 71 65 62 14 51 116 hypothetical protein (AHRD V3.3 *** AT1G27461.1) AT1G27461 Solyc04g077750.2 5 10 10 22 12 27 25 3 12 14 14 3 9 8 12 Unknown protein Solyc04g077755.1 16 24 33 13 16 21 12 14 14 8 4 12 15 7 30 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like (AHRD V3.3 *-* A0A2I4GIJ5_9ROSI) Solyc04g077760.1 0 0 0 0 0 0 0 0 0 2 0 0 0 4 3 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1U8GTN6_CAPAN) Solyc04g077770.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g077780.3 308 574 508 466 259 273 358 185 779 429 915 483 153 252 1588 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3ALK2_CEPFO) AT1G10200 Solyc04g077790.3 587 608 667 554 568 514 551 641 545 446 398 604 731 581 552 metallocarboxypeptidase inhibitor AT5G22370 Solyc04g077800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g077810.1 32 6 8 1 0 10 5 6 11 18 19 2 21 13 17 ZCF37 (AHRD V3.3 *** A0A2U1NT51_ARTAN) AT1G59590 Solyc04g077820.4 404 340 276 240 384 336 351 436 380 333 235 369 391 345 252 ZCW7 (AHRD V3.3 *** AT1G59600.1) AT1G59600 Solyc04g077830.2 239 623 491 674 968 1142 1163 1142 665 305 388 990 111 430 279 tetratricopeptide repeat protein 7B (AHRD V3.3 *** A0A2I4H060_9ROSI) AT1G27460 Solyc04g077840.2 143 98 135 109 112 121 97 98 74 89 120 102 93 127 99 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G2ZRE5_CAPAN) Solyc04g077850.3 634 393 219 233 184 157 165 151 288 424 342 252 421 315 397 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2U1KPH2_ARTAN) AT3G01400 Solyc04g077860.4 585 315 131 206 133 89 106 70 123 444 147 132 224 187 94 Sigma-B regulation protein RsbQ (AHRD V3.3 *** A0A2T0KZ78_9BURK) AT3G03990 Solyc04g077870.3 1130 1120 1074 1004 962 943 1059 1080 939 782 758 1207 962 1177 791 Calcium-transporting ATPase (AHRD V3.3 *** A0A2G2X0L5_CAPBA) AT1G27770 Solyc04g077880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cyclinD7_1 Solyc04g077890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cyclin-D5-1-like (AHRD V3.3 *** A0A2I4HS86_9ROSI) Solyc04g077900.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cyclin-D5-2-like (AHRD V3.3 *-* XP_010320526.2) Solyc04g077910.1 0 0 0 0 0 1 0 0 0 0 3 0 0 0 0 Cyclin-like protein (AHRD V3.3 *** A0A2U1MDR0_ARTAN) Solyc04g077920.3 977 1175 972 1013 1226 1358 1512 1246 1066 1104 843 863 1024 966 955 Interferon-related developmental regulator family protein / IFRD protein family (AHRD V3.3 *** A0A2U1KUG8_ARTAN) AT1G27760 Solyc04g077930.4 677 603 473 476 501 414 383 408 519 457 428 481 569 530 596 Activating signal cointegrator 1 complex subunit 2-like protein (AHRD V3.3 *** A0A2K3NPF3_TRIPR) Solyc04g077940.4 5156 2958 2113 3642 2342 2163 2268 2596 2133 3930 2121 2880 2245 2636 2456 RNA binding protein (AHRD V3.3 *-* AT2G43410.4) AT1G27750 Solyc04g077950.2 186 170 147 118 129 94 100 156 102 205 81 162 105 119 96 nucleic acid binding protein (AHRD V3.3 *-* AT1G27750.1) Solyc04g077960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor bHLH85 (AHRD V3.3 *** A0A1U8GC08_CAPAN) Solyc04g077970.4 2202 3159 6086 4668 4773 4669 4880 4160 4951 3633 5448 5135 4029 4192 5268 Adenine phosphoribosyltransferase 3 (AHRD V3.3 *** A0A2G3CPQ3_CAPCH) Solyc04g077980.1 3419 1776 2222 374 53 28 11 4 78 171 3802 940 759 864 1634 C2H2-type zinc finger protein AT1G27730 Solyc04g077990.3 5 22 28 67 100 64 105 29 7 9 0 7 23 27 126 LOB domain-containing protein 37 (AHRD V3.3 *** A0A2G3CPS9_CAPCH) Solyc04g078000.3 309 324 442 433 350 450 414 379 425 353 366 323 225 350 352 QWRF motif-containing protein 2-like (AHRD V3.3 *** A0A2I4H6P0_9ROSI) AT1G49890 Solyc04g078010.4 25 32 61 50 80 80 58 43 30 50 60 75 16 78 51 Glycosyl hydrolase family 35 protein (AHRD V3.3 *-* AT5G01075.1) Solyc04g078020.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g078030.3 0 0 1 6 0 1 0 0 0 0 0 0 0 0 9 elongation factor (AHRD V3.3 *** AT5G43150.1) AT5G43150 Solyc04g078040.3 2 3 31 19 14 18 14 9 6 1 1 3 1 7 14 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *** A0A2U1NNX3_ARTAN) AT5G43140 Solyc04g078050.3 1453 1531 1044 935 1207 1133 1127 1435 1511 1200 1009 1291 1478 1456 1081 TBP-associated factor 4B (AHRD V3.3 *** A0A1P8AM38_ARATH) AT5G43130 Solyc04g078060.1 336 94 115 153 30 20 23 25 39 158 89 53 94 84 147 transmembrane protein (AHRD V3.3 *** AT1G75810.1) AT1G75810 Solyc04g078070.4 3122 2096 3547 3303 2465 2943 2794 2076 2029 2288 3510 2027 2793 2440 4043 Unknown protein Solyc04g078075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FBD domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 -** A0A2U1MGG1_ARTAN) Solyc04g078080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g078085.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3JJ59_NOCCA) Solyc04g078090.3 358 195 324 262 218 239 217 202 289 314 387 212 233 349 387 Acyl-CoA-binding domain-containing protein 2 (AHRD V3.3 *** A0A2G2X1M3_CAPBA) AT4G24230 Solyc04g078095.1 1 0 0 0 0 0 0 0 2 0 0 0 0 3 0 glycine-rich protein 5-like (AHRD V3.3 *-* XP_025886301.1) Solyc04g078110.1 387 216 263 345 392 313 274 305 300 343 342 363 164 176 262 serine protease SBT1 Solyc04g078120.3 160 250 236 167 238 209 221 182 194 134 185 196 382 289 199 protein arginine N-methyltransferase 2 (AHRD V3.3 *** A0A2I4DLH8_9ROSI) AT5G65860 Solyc04g078130.4 548 389 433 430 423 423 389 353 383 456 423 373 438 297 378 Syntaxin/t-SNARE family protein (AHRD V3.3 *** A0A2U1LKM2_ARTAN) AT1G27700 Solyc04g078140.3 129 368 343 325 317 397 470 255 623 237 307 587 577 385 731 cytochrome b5 (AHRD V3.3 *** A0A2I4FQJ5_9ROSI) Solyc04g078160.4 212 156 208 203 228 221 184 159 174 218 221 248 209 223 251 C5orf35 (AHRD V3.3 *** AT5G23200.1) Solyc04g078170.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein (AHRD V3.3 *** A0A1P8BFL1_ARATH) AT5G43120 Solyc04g078180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g078190.4 1388 1442 1234 1150 1433 1259 1266 1646 1758 1571 1110 1348 1379 1203 960 DUF620 domain-containing protein (AHRD V3.3 *** A0A1Q3D2E6_CEPFO) Solyc04g078195.1 807 1324 1667 2735 1213 1044 1241 845 1959 3105 2502 1380 2014 1324 3509 Gibberellin-regulated protein (AHRD V3.3 *** K0E174_POPTO) Solyc04g078210.3 41 46 62 23 1 12 6 1 6 19 2 19 11 21 2 Armadillo-type fold protein (AHRD V3.3 *** A0A2U1PNX9_ARTAN) Solyc04g078220.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Metal transporter Nramp5 (AHRD V3.3 *-* A0A1U8GCH7_CAPAN) Solyc04g078230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Metal transporter (AHRD V3.3 *-* G5DVW2_SILLA) Solyc04g078240.3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Metal transporter (AHRD V3.3 *-* G5DVW2_SILLA) Solyc04g078250.4 897 798 874 889 677 795 638 656 606 716 590 551 861 870 991 metal transporter Nramp2 AT1G47240 Solyc04g078280.3 25 19 21 31 8 11 6 5 8 17 4 12 29 7 33 Unknown protein Solyc04g078270.3 17 6 13 2 5 4 8 12 6 7 16 8 4 7 1 Cytochrome P450 (AHRD V3.3 *** A0A200Q0W8_9MAGN) Solyc04g078290.4 921 754 840 491 295 254 267 308 636 891 733 484 2626 1418 675 Cytochrome P450 (AHRD V3.3 *** Q7FPQ4_HELTU) Solyc04g078300.3 48 9 6 2 0 1 0 0 1 7 0 5 6 9 1 MADS-box transcription factor (AHRD V3.3 *** A0A2K3PNN3_TRIPR) AT1G22130 Solyc04g078310.3 17 410 310 366 560 529 554 529 300 155 276 379 119 240 128 cyclin A3_1 AT1G47210 Solyc04g078320.4 3027 1915 2334 2064 1910 2372 2196 1959 1956 2169 2792 2034 1699 1952 2507 F-box-like/WD repeat-containing protein TBL1XR1-A (AHRD V3.3 *** A0A2G3CPV9_CAPCH) AT5G67320 Solyc04g078325.1 0 4 6 2 0 1 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200QZM5_9MAGN) AT5G10600 Solyc04g078340.3 0 4 0 3 0 0 0 1 0 1 0 1 6 7 4 Cytochrome P450 (AHRD V3.3 *-* A0A200QZM5_9MAGN) AT5G10600 Solyc04g078350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *-* Q9FMN6_ARATH) Solyc04g078360.1 0 0 0 2 0 0 0 0 0 1 0 0 4 0 0 Cytochrome P450 (AHRD V3.3 *** A0A346CEA9_TANCI) Solyc04g078370.3 0 2 0 0 0 0 0 0 6 0 9 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200Q0W8_9MAGN) AT5G10600 Solyc04g078380.3 2569 3877 3345 3567 3828 3913 4017 5021 3480 3243 3307 4078 4514 4274 2590 MFP1 attachment factor 1 (AHRD V3.3 *** MAF1_SOLLC) AT1G47200 Solyc04g078390.3 3485 2706 2237 2282 1828 1591 1634 1717 2720 2741 3091 2094 2856 1921 2540 F-box protein GID2 (AHRD V3.3 *** A0A2G2ZRI1_CAPAN) AT4G24210 Solyc04g078400.3 1258 766 597 613 739 649 612 773 772 811 749 916 718 843 757 Mortality factor 4-like protein 1 (AHRD V3.3 *** A0A1J3DXD1_NOCCA) AT1G02740 Solyc04g078410.4 3 3 0 14 0 1 6 2 15 4 9 4 7 2 7 Pkinase domain-containing protein/S_locus_glycop domain-containing protein/B_lectin domain-containing protein (AHRD V3.3 *** A0A1Q3BH96_CEPFO) Solyc04g078420.1 30214 14805 10818 12629 4439 4999 5482 3237 7676 24135 16994 11359 8680 7668 17168 R2R3MYB transcription factor 70 AT5G67300 Solyc04g078430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) Solyc04g078440.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) Solyc04g078450.4 0 0 1 0 0 0 0 1 2 6 0 1 0 0 0 Unknown protein Solyc04g078460.3 69 3136 435 1284 785 720 656 820 3628 1117 430 1132 1071 628 288 Isoaspartyl peptidase/L-asparaginase (AHRD V3.3 *** A0A1U8GBV5_CAPAN) AT3G16150 Solyc04g078470.3 386 1729 2818 2209 3911 4108 3863 3204 2619 1396 1887 2860 1342 2205 1083 D-type cyclin-3 Solyc04g078480.3 480 604 578 448 510 541 482 556 584 470 561 505 486 600 563 DNA-directed RNA polymerase subunit (AHRD V3.3 *-* A0A078J372_BRANA) AT3G46630 Solyc04g078490.1 594 608 624 634 584 644 563 712 662 736 695 673 585 573 593 F-box protein (AHRD V3.3 *** A0A2G2XGV7_CAPBA) AT1G47056 Solyc04g078500.1 144 54 174 179 86 60 56 21 53 43 147 79 76 68 164 cyclinJ18 AT2G01905 Solyc04g078510.4 2482 3524 5108 6425 4797 6515 5450 4683 2903 3216 7883 3708 3597 3634 5018 Protein RER1 (AHRD V3.3 *** A0A2G3CPV7_CAPCH) Solyc04g078520.3 435 333 335 375 250 174 176 140 389 428 851 315 223 278 324 Transcription factor MYC/MYB domain-containing protein (AHRD V3.3 *** A0A2U1MUV3_ARTAN) Solyc04g078530.3 3 2 8 0 0 4 0 0 3 2 2 0 0 2 0 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) Solyc04g078540.4 1088 1486 1681 1783 1652 1417 1426 1995 3059 3097 1787 2123 1733 1592 1385 Cysteine proteinase RD21a (AHRD V3.3 *** A0A2G3CPV2_CAPCH) Solyc04g078550.3 2038 2781 2859 2751 2589 2740 2175 2672 3266 2864 3532 2721 2509 1943 1648 WRKY transcription factor 7 AT4G24240 Solyc04g078560.1 1 13 16 48 33 58 23 50 40 15 20 50 26 19 10 Leucine-rich repeat (AHRD V3.3 *** A0A200QZJ6_9MAGN) AT4G06744 Solyc04g150170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3EXQ7_NOCCA) Solyc04g078590.3 327 3278 3080 3074 7643 7676 7187 8589 3914 1745 2864 4955 1346 2944 868 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** Q9FMI2_ARATH) AT5G43020 Solyc04g078600.3 1129 642 977 792 577 779 708 575 727 474 804 780 763 750 889 hypothetical protein (AHRD V3.3 *** AT5G47830.1) AT5G47830 Solyc04g078610.4 929 1748 1362 1441 1980 2002 2099 2251 2575 1683 1652 1706 1524 1446 1501 Kinesin (AHRD V3.3 *** A0A200QZN6_9MAGN) AT5G47820 Solyc04g078620.3 724 1499 1888 1757 2215 2338 1962 2380 1539 1667 1856 1863 1809 1688 1327 Ubiquitin-conjugating enzyme (AHRD V3.3 *** B3TLZ3_ELAGV) Solyc04g078630.3 64 15 31 19 9 21 16 7 26 23 17 9 35 41 31 SPRY domain, Concanavalin A-like lectin/glucanase domain protein (AHRD V3.3 *** A0A2U1NV09_ARTAN) AT4G06534 Solyc04g078640.3 356 59 61 39 4 6 10 6 18 101 96 4 18 49 84 Ethylene-responsive transcription factor RAP2-1 (AHRD V3.3 *** A0A1U8GBU2_CAPAN) AT5G67190 Solyc04g078650.4 192 312 374 463 508 451 456 476 572 363 785 354 652 365 593 wuschel related homobox 4 AT1G46480 Solyc04g078660.2 94 90 61 66 55 37 48 87 56 28 27 43 187 123 63 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1LZ70_ARTAN) AT5G42830 Solyc04g078670.3 151 103 44 88 62 56 66 59 84 92 91 90 72 85 79 NAC domain protein (AHRD V3.3 *** S5RUW2_9ROSA) Solyc04g078680.4 1314 1520 1675 1338 1476 1598 1663 1728 1843 1505 1457 1561 1505 1623 1407 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PN10_ARTAN) AT5G42940 Solyc04g078690.3 694 931 1443 1143 1621 1712 1664 1424 1026 1386 1273 1181 927 934 805 bHLH transcription factor 035 Solyc04g078700.3 642 771 701 781 813 746 759 947 984 957 665 863 551 622 669 Protein kinase domain (AHRD V3.3 *** A0A200QZD6_9MAGN) AT4G02630 Solyc04g078710.3 16 40 74 22 22 6 6 11 106 410 82 17 176 48 87 Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC) Solyc04g078720.1 5 10 12 20 6 2 1 4 14 79 65 1 44 14 58 Subtilisin-like protease (AHRD V3.3 *** Q38708_ALNGL) AT5G67090 Solyc04g078730.1 1 1 0 4 0 0 0 0 0 2 0 0 0 0 1 Subtilisin-like protease (AHRD V3.3 *** Q38708_ALNGL) AT5G67090 Solyc04g078740.2 371 331 802 648 7 25 27 30 740 581 1125 244 1005 552 639 Subtilisin-like protease-like protein (AHRD V3.3 *** A0A2K3MUK4_TRIPR) AT5G67090 Solyc04g078750.3 1547 2561 5241 2975 2440 2507 2597 2334 3956 2952 5524 2629 2385 2140 2293 Late embryogenesis abundant protein (AHRD V3.3 *** A0A200QZD5_9MAGN) AT1G45688 Solyc04g078760.4 1086 958 1569 1485 1348 1500 1496 1279 1027 1051 1413 1114 1076 1045 1303 CONSTANS interacting protein 4 AT1G45976 Solyc04g078770.4 224 692 737 638 2054 2026 2061 1993 855 405 626 1018 1046 726 438 Heat stress transcription factor B-4 (AHRD V3.3 *** A0A2G2Y0E5_CAPAN) AT1G46264 Solyc04g078780.3 568 702 751 595 629 586 616 583 739 555 506 644 801 687 675 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1LUD4_ARTAN) AT3G49180 Solyc04g078790.3 0 1 2 3 0 3 0 1 8 3 1 0 0 1 1 Transcription factor HEC1 (AHRD V3.3 *** A0A2G2Y0E0_CAPAN) AT3G50330 Solyc04g078800.3 11 20 14 14 0 0 1 0 9 12 17 1 24 15 1 Lipase (AHRD V3.3 *** A0A200QYW4_9MAGN) Solyc04g078810.4 680 1298 1579 1443 1948 2220 2018 1970 1521 1357 1323 1472 1208 1163 1059 Remorin family protein (AHRD V3.3 *** A0A2U1MLE0_ARTAN) AT1G45207 Solyc04g078820.4 1100 1172 1155 853 1119 1001 891 1084 1334 1115 864 1142 1443 1194 1024 annexin 7 AT1G68090 Solyc04g078830.3 2254 2661 2356 2332 2207 2083 2409 2255 2304 2384 1954 2181 3307 3075 2033 THO complex subunit 5B (AHRD V3.3 *** A0A2G3CPZ0_CAPCH) AT5G42920 Solyc04g078840.3 4769 1157 559 876 599 738 577 621 850 2239 926 887 947 1794 5511 AREB AT1G45249 Solyc04g078850.4 209 191 244 207 182 176 155 175 204 163 174 172 170 225 259 defective chloroplasts and leaves AT1G45230 Solyc04g078860.4 77 76 95 88 66 42 51 73 64 62 78 84 77 74 79 glutamate receptor-like 1.1 Solyc04g078870.4 1305 958 2078 1704 1088 1056 1168 986 1348 1309 2198 1421 1275 1604 1908 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G3CPZ1_CAPCH) AT5G09890 Solyc04g078880.3 397 38 1082 636 6 20 11 8 794 92 1421 584 274 782 1200 cold regulated protein 27 (AHRD V3.3 *** AT5G42900.2) AT5G42900 Solyc04g078890.4 134 122 160 139 110 179 159 118 150 131 212 146 137 153 100 Coenzyme Q-binding protein (AHRD V3.3 *** A0A2U1KEL4_ARTAN) AT4G17650 Solyc04g078900.3 3823 2707 1703 2438 1307 1365 1261 1314 3170 2951 1325 1844 1848 2234 3563 ABA 8'-hydroxylase Solyc04g078910.3 215 129 218 163 282 300 269 200 146 199 286 152 94 131 236 Thioredoxin-like 4, chloroplastic (AHRD V3.3 *** A0A2G2VBX3_CAPBA) AT1G07700 Solyc04g078920.3 892 651 728 820 470 506 512 486 648 753 836 604 682 832 920 Sterol carrier protein 2 (AHRD V3.3 *** Q9FMN0_ARATH) AT5G42890 Solyc04g078930.4 198 83 74 127 73 73 61 65 54 108 76 29 151 134 136 Alpha-amylase (AHRD V3.3 *** K4BUX7_SOLLC) AT4G25000 Solyc04g078940.3 965 2212 2196 2401 3040 3340 3334 3329 2001 1553 2138 2716 996 1814 1235 LEY13632 Dem protein AT4G33400 Solyc04g078950.1 249 255 170 202 199 233 250 203 255 200 221 188 203 219 226 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *-* A0A2G2ZRM3_CAPAN) Solyc04g078960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g078970.3 223 172 95 98 128 141 158 175 266 171 126 141 134 138 99 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *-* A0A2G2VC40_CAPBA) Solyc04g078975.1 2 0 0 1 4 0 2 1 0 6 0 3 0 1 0 Unknown protein Solyc04g078980.4 0 0 4 3 0 1 0 0 2 2 0 0 0 0 0 Hexosyltransferase (AHRD V3.3 *** K4BUY2_SOLLC) AT4G33330 Solyc04g078990.4 0 8 4 6 6 4 2 4 3 2 4 1 2 10 26 Hexosyltransferase (AHRD V3.3 *** K4BUY3_SOLLC) AT4G33330 Solyc04g079000.4 617 634 774 696 705 734 736 715 578 526 621 545 560 713 798 Protein TIC 22, chloroplastic (AHRD V3.3 *** A0A2G2ZRP4_CAPAN) AT4G33350 Solyc04g079010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial (AHRD V3.3 *-* A0A2G2Z527_CAPAN) Solyc04g079020.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial (AHRD V3.3 *-* A0A2G2WEX3_CAPBA) Solyc04g079030.2 297 196 90 261 187 210 278 220 253 161 114 139 396 242 278 Glycosyltransferase (AHRD V3.3 *** V4NB36_EUTSA) Solyc04g079040.4 19 38 35 56 34 64 68 103 90 40 37 43 43 22 79 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3MSK4_TRIPR) AT2G23000 Solyc04g079050.3 406 1289 390 853 1509 1245 1206 1597 2595 1486 604 1692 2001 980 606 UDP-glycosyltransferase 79B2 (AHRD V3.3 *** A0A2G3CJJ2_CAPCH) Solyc04g079060.3 215 501 303 449 497 495 492 578 634 412 433 303 463 363 511 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3MSK4_TRIPR) AT2G23000 Solyc04g079070.4 0 7 7 2 3 7 8 6 1 9 4 0 0 2 0 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3MSK4_TRIPR) AT2G23000 Solyc04g079080.2 61 25 28 26 0 0 0 8 20 28 23 5 29 27 15 EF-hand domain (AHRD V3.3 *-* A0A200QZF0_9MAGN) Solyc04g079090.4 363 218 264 342 173 259 226 204 286 298 250 220 296 345 309 Phosphatidate phosphatase PAH1 (AHRD V3.3 *** A0A2G2X0Q9_CAPBA) Solyc04g079100.3 1155 850 586 648 690 650 711 740 702 820 675 622 553 715 833 Phosphatidate phosphatase PAH1 (AHRD V3.3 *** A0A2G3CJG9_CAPCH) AT5G42870 Solyc04g079110.1 163 165 34 118 183 147 145 162 149 164 96 58 298 70 97 BRI1 kinase inhibitor 1-like (AHRD V3.3 *** A0A2I4E9L6_9ROSI) AT5G42750 Solyc04g079120.3 180 387 678 288 322 368 358 310 494 389 526 278 352 284 229 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1LUI4_ARTAN) AT1G47380 Solyc04g079130.2 56 721 708 902 1987 1780 2037 2260 728 253 744 974 102 365 349 B3 domain-containing protein (AHRD V3.3 *** A0A1U8GC90_CAPAN) Solyc04g079140.3 1008 846 919 905 1082 944 970 875 763 758 920 843 755 925 957 peptidase%2C S9A/B/C family%2C catalytic domain protein (Protein of unknown function DUF829%2C transmembrane 53) (AHRD V3.3 *** AT5G44250.1) AT5G44250 Solyc04g079150.1 99 65 68 63 61 64 36 58 60 33 47 22 132 97 62 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A1U8GBP5_CAPAN) AT1G73400 Solyc04g079160.4 232 353 402 372 413 509 521 473 419 311 416 299 383 352 436 dimethylallyl%2C adenosine tRNA methylthiotransferase (AHRD V3.3 *** AT4G33380.1) AT4G33380 Solyc04g079170.4 14 19 26 24 32 31 21 30 29 6 17 22 12 13 45 hypothetical protein (AHRD V3.3 *-* AT1G47410.2) AT1G47410 Solyc04g079180.3 1091 1492 1178 1244 1341 1170 1154 1338 1266 1374 1121 1273 1513 1220 1226 Succinate dehydrogenase subunit 5, mitochondrial (AHRD V3.3 *** A0A2G2X0V7_CAPBA) AT1G47420 Solyc04g079190.4 66 63 83 143 64 44 24 46 81 68 70 16 64 87 175 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KK17_ARTAN) AT1G47480 Solyc04g079200.3 1597 2110 1712 1599 1762 1612 1662 1951 2130 1864 1712 1786 2553 1965 1708 26S proteasome non-ATPase regulatory subunit 14 homolog (AHRD V3.3 *** A0A2I4G2M0_9ROSI) AT5G23540 Solyc04g079210.3 6310 2959 7816 4016 1334 1476 1800 992 2291 3421 5556 2372 3842 3705 2157 Patatin (AHRD V3.3 *** A0A2G2X0P8_CAPBA) Solyc04g079230.4 1549 730 1183 905 325 283 310 266 564 902 971 601 956 705 167 Patatin (AHRD V3.3 *-* A0A2G2X0P8_CAPBA) Solyc04g079240.3 46 27 29 29 10 5 16 9 13 23 20 14 19 19 9 Patatin (AHRD V3.3 *** A0A2G2X0P5_CAPBA) AT2G26560 Solyc04g079250.3 627 386 407 176 15 14 15 24 125 302 222 83 572 291 95 Patatin (AHRD V3.3 *** A0A2G2ZRS1_CAPAN) AT2G26560 Solyc04g079260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 Patatin (AHRD V3.3 *** A0A2G2ZRS1_CAPAN) AT2G26560 Solyc04g079270.4 958 1887 2091 2463 2151 2425 2576 2003 1789 1508 1935 1607 2238 2307 1775 Sorting and assembly machinery component 50-like protein (AHRD V3.3 *** A0A1J3DIC1_NOCCA) AT5G05520 Solyc04g079280.4 382 315 262 313 259 272 367 331 313 300 275 315 337 356 330 Alpha/beta-hydrolases superfamily protein (AHRD V3.3 *** A0A068F542_BRANA) AT4G34310 Solyc04g079290.3 133 258 270 250 292 323 311 308 223 199 202 265 237 279 195 heme oxygenase 2 AT2G26550 Solyc04g079300.3 816 412 398 382 97 103 74 100 343 577 412 305 627 732 867 Calcineurin-like metallo-phosphoesterase superfamily protein (AHRD V3.3 *** F4JPS4_ARATH) AT4G23000 Solyc04g079310.4 2131 4311 1885 2083 2012 1811 2083 2413 2361 2040 1424 1974 4965 3402 2469 RNA-binding protein 47C (AHRD V3.3 *** A0A2U1PUZ3_ARTAN) AT1G47490 Solyc04g079320.4 1366 747 766 705 593 590 670 581 691 1004 832 644 586 634 956 Uroporphyrinogen-III synthase, chloroplastic (AHRD V3.3 *** A0A2G2ZRP3_CAPAN) AT2G26540 Solyc04g079330.2 21 10 26 28 41 39 26 23 6 3 20 19 5 11 0 Carboxypeptidase (AHRD V3.3 *** A0A2G2X0Z2_CAPBA) Solyc04g079340.3 407 1017 1001 1128 1315 1230 1343 1112 1067 546 1017 745 850 772 849 DUF547 domain-containing protein/Lzipper-MIP1 domain-containing protein (AHRD V3.3 *** A0A1Q3BMV4_CEPFO) Solyc04g079350.1 222 112 27 68 0 4 0 0 86 141 109 50 146 116 135 Pheromone receptor-like protein (AHRD V3.3 *** G7J5T8_MEDTR) Solyc04g079360.1 637 384 906 152 27 29 21 16 219 197 937 330 201 229 163 R2R3MYB transcription factor 77 Solyc04g079370.4 34 93 120 48 68 62 48 37 33 57 102 33 115 93 55 Serpin family (AHRD V3.3 *** A0A200QJD7_9MAGN) Solyc04g079380.1 259 481 341 431 301 360 367 394 303 247 352 317 465 411 331 Ribosomal protein S14 (AHRD V3.3 *** A0A0M5L7R7_9MAGN) AT2G34520 Solyc04g079390.3 686 763 663 685 752 797 883 846 703 651 663 692 760 917 605 Gamma-tubulin complex component (AHRD V3.3 *** A0A1U8GKU9_CAPAN) AT1G80260 Solyc04g079400.3 734 707 707 516 568 503 600 543 609 755 601 598 864 630 366 MAP kinase kinase kinase 35 Solyc04g079410.3 1112 560 349 330 247 253 226 298 321 527 411 420 550 544 475 Protein OSB1, mitochondrial (AHRD V3.3 *** A0A1J3HEF5_NOCCA) AT1G47720 Solyc04g079420.3 4333 1695 1743 1014 206 210 214 189 601 1859 1425 281 1515 2069 1617 Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *** A0A1P8BE24_ARATH) AT4G33300 Solyc04g079430.4 1073 829 1085 765 623 660 676 762 724 1132 834 696 554 614 550 Nucleobase-ascorbate transporter 3 (AHRD V3.3 *** A0A2G3CQ85_CAPCH) AT2G26510 Solyc04g079440.3 1491 989 1037 1046 706 694 681 843 773 1264 793 872 1448 1023 810 Serpin-ZX (AHRD V3.3 *** A0A2G3CQ78_CAPCH) AT1G47710 Solyc04g079450.4 4 3 18 25 0 0 0 0 0 4 23 1 4 5 29 Serpin-ZX (AHRD V3.3 *** A0A2G2ZRU3_CAPAN) Solyc04g079460.1 5 0 5 6 0 0 0 0 0 0 2 0 0 5 13 Serpin-ZX (AHRD V3.3 *** A0A2G3CQ68_CAPCH) AT1G64020 Solyc04g079470.3 61 20 188 267 0 1 0 0 3 12 78 5 52 110 349 Serpin-ZX (AHRD V3.3 *** A0A2G2ZRV1_CAPAN) AT1G47710 Solyc04g079480.2 90 40 137 297 1 9 2 3 22 51 52 12 76 141 254 Serpin-ZX (AHRD V3.3 *** A0A2G2X0W8_CAPBA) AT1G47710 Solyc04g079490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serpin-ZX (AHRD V3.3 *-* A0A2G3A1J9_CAPAN) Solyc04g079500.2 0 1 7 0 0 0 0 0 0 0 0 0 0 0 4 Unknown protein Solyc04g150171.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serpin-ZX (AHRD V3.3 *-* A0A2U1KM08_ARTAN) Solyc04g079510.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1PWN6_ARTAN) Solyc04g079520.3 12 43 78 153 7 11 8 11 71 63 57 51 42 64 182 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AT47_ARATH) Solyc04g079530.3 0 0 3 3 0 2 0 0 1 3 4 0 3 0 12 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1PWN6_ARTAN) Solyc04g079540.3 258 275 236 280 186 253 296 205 309 320 259 258 252 199 328 signal peptidase I (AHRD V3.3 *** AT1G47310.1) AT1G47310 Solyc04g079550.4 3000 3461 3457 3958 3759 3527 3788 3969 3660 4478 3289 3414 3386 3105 2676 Signal peptidase I (AHRD V3.3 *** B2J5A2_NOSP7) AT2G30440 Solyc04g079560.3 716 2857 2918 2974 3600 3209 2891 4111 4373 1697 2051 3414 2829 3682 2844 Lysine histidine transporter-like 8 (AHRD V3.3 *** A0A1U8GKT6_CAPAN) AT1G47670 Solyc04g079570.1 183 273 202 228 234 212 148 202 425 233 191 243 288 315 186 Dof zinc finger protein (AHRD V3.3 *-* A0A2K3NXA1_TRIPR) Solyc04g083160.2 184 248 173 249 245 167 160 212 327 127 137 174 221 356 169 Solyc04g083160 AT5G25900 Solyc04g079590.3 876 811 778 622 813 717 689 842 887 932 506 877 859 814 710 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3CJU4_CEPFO) Solyc04g079600.3 38 127 48 93 300 299 329 249 212 69 138 166 125 111 52 Homeodomain-like superfamily protein (AHRD V3.3 *-* A0A2U1M9P5_ARTAN) AT5G42630 Solyc04g079640.3 733 751 664 702 446 374 502 425 1110 660 806 795 823 757 891 Cytochrome P450 (AHRD V3.3 *** A0A2U1M7T5_ARTAN) Solyc04g079660.2 174 128 142 100 66 57 71 75 55 89 92 72 114 131 84 Cytochrome P450 (AHRD V3.3 *** A0A2U1M7T5_ARTAN) Solyc04g079670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g079680.4 147 122 157 143 111 130 113 100 66 72 52 82 114 95 172 Cytochrome P450 (AHRD V3.3 *** A0A2U1M7T5_ARTAN) Solyc04g079690.3 40 68 136 125 153 196 249 135 119 69 159 115 60 106 264 Protein kinase domain-containing protein (AHRD V3.3 *** A0A2U1M8U4_ARTAN) Solyc04g079700.3 81 73 100 382 57 71 47 50 112 68 30 49 34 83 73 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PM75_ARTAN) AT2G26490 Solyc04g079710.4 230 275 175 274 141 127 111 116 241 235 172 133 404 346 408 Wall-associated receptor kinase-like 14 (AHRD V3.3 *** A0A1U8GBI3_CAPAN) Solyc04g079720.4 2736 1972 1538 1643 1518 1232 1090 1681 1923 3119 1638 2030 2462 1800 1514 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1N4J4_ARTAN) AT1G28680 Solyc04g079730.1 15 133 817 67 19 50 24 48 170 343 160 117 82 74 48 allene oxide synthase AT5G42650 Solyc04g079740.3 152 222 202 151 167 188 148 144 116 134 145 196 238 231 230 tRNA-processing ribonuclease BN (AHRD V3.3 *** AT1G48460.1) AT1G48460 Solyc04g079750.4 86 80 148 138 99 69 53 55 61 85 116 75 82 111 122 Octanoyltransferase (AHRD V3.3 *** A0A2G2ZRY5_CAPAN) AT1G47578 Solyc04g079760.4 93 15 30 42 0 0 1 0 37 55 101 43 17 25 37 UPF0114 domain-containing protein (AHRD V3.3 *** A0A1Q3D8A0_CEPFO) Solyc04g079770.3 392 394 368 431 365 412 424 351 426 336 442 383 387 372 472 DUF616 domain-containing protein (AHRD V3.3 *** A0A1Q3BUD2_CEPFO) AT5G42660 Solyc04g079780.4 64 23 17 34 2 10 6 7 13 25 33 8 18 31 65 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2X0V0_CAPBA) Solyc04g079790.3 219 775 758 487 836 996 849 828 603 420 718 554 546 697 470 30S ribosomal protein S9 protein (AHRD V3.3 *** A0A2U1PM70_ARTAN) AT1G74970 Solyc04g079800.4 1048 828 969 1019 1062 1197 1044 903 775 1013 1079 846 870 909 974 F-box/FBD/LRR-repeat protein (AHRD V3.3 *-* A0A2K3NGD2_TRIPR) Solyc04g079820.3 3 4 4 0 0 1 1 0 0 2 0 1 0 0 0 Inositol polyphosphate-related phosphatase (AHRD V3.3 *** A0A200Q277_9MAGN) AT1G47510 Solyc04g079830.2 116 26 70 69 20 22 23 6 26 11 63 38 4 31 89 Homeobox protein BEL1-like protein (AHRD V3.3 *** A0A2G2X0S6_CAPBA) Solyc04g079840.4 617 444 610 498 523 635 601 493 473 490 500 371 563 534 651 Protein DA1 (AHRD V3.3 *** A0A2G2ZS04_CAPAN) AT1G19270 Solyc04g079850.2 338 270 340 397 220 185 222 241 252 211 275 208 269 279 302 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q2A9_9MAGN) AT1G19290 Solyc04g079860.1 495 348 1033 381 150 116 112 116 299 604 873 283 259 271 321 Hexosyltransferase (AHRD V3.3 *** A0A2G2ZRY0_CAPAN) AT1G19300 Solyc04g079870.2 13 5 18 3 4 3 9 3 10 27 24 5 7 8 2 serine--tRNA ligase-like (AHRD V3.3 *** A0A2I4DVH0_9ROSI) Solyc04g079880.4 33 19 30 27 1 7 6 8 41 35 25 36 23 20 33 DNA damage-binding protein 1 (AHRD V3.3 *-* A0A2G3CQ10_CAPCH) AT1G75020 Solyc04g079890.4 5 17 8 13 18 24 24 7 21 13 48 21 5 7 3 Thaumatin (AHRD V3.3 *** A0A200R7J3_9MAGN) AT1G75030 Solyc04g079900.3 848 745 801 837 923 1008 1025 876 953 795 837 947 630 776 845 Metalloendopeptidase / zinc ion binding protein (AHRD V3.3 *** F4K306_ARATH) AT5G42620 Solyc04g079910.4 10 27 10 22 22 19 16 9 15 11 0 16 22 8 10 Calcium uniporter protein 4, mitochondrial (AHRD V3.3 *** A0A2G3CPZ7_CAPCH) Solyc04g079920.4 840 938 677 741 560 820 813 710 798 564 608 604 708 864 770 Pre-mRNA-splicing factor CWC22-like protein (AHRD V3.3 *** A0A2G2ZS42_CAPAN) Solyc04g079930.3 940 1207 1940 2026 2463 2493 2211 2011 1280 1374 1919 1912 1114 1313 1240 Histone deacetylase complex subunit (AHRD V3.3 *** Q9C9Q1_ARATH) AT1G19330 Solyc04g079940.3 1155 690 895 411 319 258 244 279 519 1282 886 376 1162 680 674 NAC domain-containing protein (AHRD V3.3 *** A0A2U1N781_ARTAN) Solyc04g079950.4 358 218 207 220 170 216 236 227 153 230 152 207 250 260 182 Methyltransferase-like protein 2 (AHRD V3.3 *** A0A1U8GBC4_CAPAN) AT1G19340 Solyc04g079960.1 27 88 86 82 133 56 73 100 53 55 78 67 71 79 72 geranylgeranyl pyrophosphate synthase 2 Solyc04g079970.3 20261 7586 7404 7304 5557 5619 4831 4960 6652 7057 8046 5551 6034 6027 8445 RUB1 conjugating enzyme AT4G36800 Solyc04g079980.3 1522 1713 2136 2949 1783 1466 2053 2348 1678 2322 2597 1863 1773 1881 2024 Protein BZR1-like protein 1 (AHRD V3.3 *** A0A2G2ZS52_CAPAN) AT1G75080 Solyc04g079990.4 238 245 233 279 316 293 279 280 287 294 264 331 148 188 254 DNA-3-methyladenine glycosylase I (AHRD V3.3 *-* A0A2I0X0X0_9ASPA) AT1G75090 Solyc04g080000.1 859 419 334 414 267 247 210 228 254 534 425 345 444 331 401 peroxisomal membrane protein 11A (AHRD V3.3 *** A0A2I4F4R2_9ROSI) AT1G47750 Solyc04g080010.4 121 114 92 197 109 86 48 85 70 57 7 58 64 73 281 Glycosyltransferase (AHRD V3.3 *** A0A2I4F4T3_9ROSI) Solyc04g080020.4 1769 1386 1033 1153 1282 1376 1152 1280 1293 1370 1354 1441 1336 1206 1044 Lysophospholipid acyltransferase LPEAT1 (AHRD V3.3 *** A0A2G3CQB8_CAPCH) AT1G80950 Solyc04g080030.3 384 503 612 687 610 608 640 525 603 506 636 440 867 622 570 PPPDE putative thiol peptidase family protein (AHRD V3.3 *** Q8RXP3_ARATH) AT1G47740 Solyc04g080040.3 468 459 69 274 486 393 446 469 230 174 66 134 240 86 52 Auxilin-related protein 2 (AHRD V3.3 *** A0A2G3CQ94_CAPCH) AT1G75100 Solyc04g080050.4 491 773 817 866 797 957 997 782 613 645 806 669 785 849 884 EXS (AHRD V3.3 *** A0A200R094_9MAGN) AT5G35730 Solyc04g080060.3 248 239 226 215 222 225 289 185 206 206 181 164 206 226 233 APO protein 4, mitochondrial (AHRD V3.3 *** A0A1U8GKI3_CAPAN) AT3G21740 Solyc04g080070.1 5 6 1 3 12 6 3 4 2 2 8 0 2 2 10 Ubiquitin (AHRD V3.3 *-* A0A2U1KZS9_ARTAN) Solyc04g080080.3 356 532 478 510 500 491 422 509 569 479 541 479 547 537 379 Glycosyltransferase (AHRD V3.3 *** A0A2G2X173_CAPBA) AT1G19360 Solyc04g080090.4 106 94 75 64 68 66 71 88 84 75 75 95 85 79 102 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1NN53_ARTAN) Solyc04g080100.3 598 645 719 639 753 787 746 893 863 688 550 787 619 676 574 Cytochrome P450 (AHRD V3.3 *** A0A200R7I2_9MAGN) AT1G75130 Solyc04g080110.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 APO protein 4, mitochondrial (AHRD V3.3 *-* A0A1U8GKI3_CAPAN) Solyc04g080120.1 66 38 6 40 12 45 36 20 32 31 38 20 36 44 19 Pentatricopeptide repeat protein (AHRD V3.3 *** A0A2U1MNU4_ARTAN) AT1G12700 Solyc04g080130.3 2440 1564 1521 1205 1240 1492 1417 1192 845 1351 1943 779 547 864 937 Zinc finger protein (AHRD V3.3 *-* A0A200QCG2_9MAGN) Solyc04g080140.4 736 567 560 464 378 408 409 401 583 524 406 548 478 513 617 alpha-1%2C6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (AHRD V3.3 *** AT1G45150.1) AT1G45150 Solyc04g080150.3 0 2 0 0 0 0 0 0 0 0 0 0 0 3 0 60S ribosomal protein L11 (AHRD V3.3 *** A0A2G2YTV2_CAPAN) Solyc04g080160.3 528 830 847 777 871 950 1016 907 946 603 740 850 962 853 672 COP9 signalosome complex subunit 4 (AHRD V3.3 *** A0A1U8GKH2_CAPAN) AT5G42970 Solyc04g080170.3 674 449 282 492 463 387 509 460 412 383 390 370 376 466 471 Protein kinase domain (AHRD V3.3 *** A0A200R7I6_9MAGN) AT1G45160 Solyc04g080180.1 362 531 443 491 632 709 571 670 628 482 442 519 553 572 396 membrane protein (AHRD V3.3 *** AT1G75140.1) AT1G75140 Solyc04g080190.3 379 646 593 464 707 679 607 656 567 396 546 510 712 527 396 Outer envelope pore protein 24, chloroplastic (AHRD V3.3 *** A0A2G3AX36_CAPCH) AT1G45170 Solyc04g080200.4 178 1029 1087 711 1197 1367 1458 1334 1119 422 665 1098 829 1231 437 hypothetical protein (AHRD V3.3 *-* AT3G56870.2) AT3G56870 Solyc04g080210.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ovate family protein 9 Solyc04g080220.3 5 40 39 38 39 45 68 33 18 11 76 35 10 36 1 DUF620 family protein (DUF620) (AHRD V3.3 *** F4HXG1_ARATH) AT1G75160 Solyc04g080230.3 595 551 539 546 567 568 496 571 661 595 939 506 594 541 651 DUF1195 domain-containing protein (AHRD V3.3 *** A0A1Q3BNM7_CEPFO) Solyc04g080240.4 7229 6179 4834 4452 4862 4780 4999 5197 5310 5413 4120 5056 5064 6008 5764 GYF domain-containing protein (AHRD V3.3 *-* A0A1Q3BQE0_CEPFO) AT5G42950 Solyc04g080250.3 4 0 0 0 0 0 0 0 0 0 0 0 0 8 1 Deoxyuridine 5'-triphosphate nucleotidohydrolase (AHRD V3.3 *** A0A2G3AX44_CAPCH) Solyc04g080260.4 4928 4454 4286 4627 3822 3549 3344 3399 3289 3613 3698 2929 4040 3351 3827 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** J9Z4Z2_ELAGV) Solyc04g080270.4 78 104 112 94 59 67 58 68 75 53 68 105 87 103 187 hypothetical protein (AHRD V3.3 *-* AT5G42710.3) AT5G42710 Solyc04g080280.3 13746 7345 9307 12003 5228 5928 7500 4445 6543 7867 8070 7420 5874 8853 13406 Unknown protein Solyc04g080290.3 1281 1536 1344 1542 958 737 792 687 2248 2579 2172 2323 1765 1439 1600 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** Q9FRK8_ARATH) AT1G75170 Solyc04g080300.4 2328 1052 378 680 500 514 407 510 558 894 516 478 772 502 456 Erythronate-4-phosphate dehydrogenase family protein (AHRD V3.3 *** Q8VYC6_ARATH) AT1G75180 Solyc04g080310.1 346 204 280 166 164 214 192 176 226 127 262 121 432 218 291 Unknown protein Solyc04g080320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein CPR30-like (AHRD V3.3 *** A0A2I4FD59_9ROSI) AT3G47150 Solyc04g080330.3 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4BVB2_SOLLC) AT1G49570 Solyc04g080340.3 1527 2356 1588 2241 1714 1577 1692 1910 1591 1825 1283 1676 1916 2414 1417 NADPH--cytochrome P450 reductase (AHRD V3.3 *-* A0A2K1IUR7_PHYPA) AT1G75200 Solyc04g080350.4 197 172 106 125 81 126 119 116 141 119 166 154 136 163 182 Phosphorylated adapter RNA export protein (AHRD V3.3 *** A0A200QMN1_9MAGN) AT3G20430 Solyc04g080360.4 598 812 1006 823 666 760 814 611 824 630 833 635 869 882 1036 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1Q220_ARTAN) AT1G19430 Solyc04g080370.3 1532 1059 812 906 912 849 753 970 966 1229 1062 823 1130 947 770 DUF21 domain-containing protein (AHRD V3.3 *** A0A1U8GB48_CAPAN) AT1G47330 Solyc04g080380.3 1283 405 164 198 192 196 185 117 232 347 221 141 89 93 247 Leucine carboxyl methyltransferase (AHRD V3.3 *** A0A2U1QMA3_ARTAN) AT5G42760 Solyc04g080390.4 681 520 527 724 418 378 546 463 655 588 390 621 514 678 437 plasma membrane fusion protein (AHRD V3.3 *** AT5G42765.1) AT5G42765 Solyc04g080395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1MQE5_ARTAN) Solyc04g080410.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 agglutinin-like (AHRD V3.3 *** A0A1U7VD69_NICSY) Solyc04g080420.4 17 9 18 29 0 1 0 3 12 15 33 1 17 28 48 agglutinin-like isoform X1 (AHRD V3.3 *** A0A1U8GRQ9_CAPAN) Solyc04g080430.3 326 441 433 465 556 446 398 497 402 409 359 468 484 510 474 Cytosolic purine 5'-nucleotidase (AHRD V3.3 *** A0A1J3DGU2_NOCCA) AT1G75210 Solyc04g150172.1 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 Protein RADIALIS-like 6 (AHRD V3.3 *** A0A1U8GJH9_CAPAN) Solyc04g080440.4 444 613 576 593 756 816 834 771 653 476 582 688 661 625 670 Maf-like protein (AHRD V3.3 *** A0A1P8BCG1_ARATH) AT5G42770 Solyc04g080450.1 935 1249 1071 1103 1434 1386 1371 1631 1958 1341 1195 1329 1190 920 833 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G2V5U9_CAPBA) AT1G19440 Solyc04g080460.3 413 461 276 294 337 310 434 434 511 574 392 561 579 431 236 Sugar facilitator protein 4 AT1G75220 Solyc04g080470.4 647 774 659 1449 937 709 884 1071 804 1682 635 1162 743 809 519 DNA-3-methyladenine glycosylase 1-like (AHRD V3.3 *** A0A2I4EQE9_9ROSI) AT1G75230 Solyc04g080480.1 28 45 30 6 17 11 11 1 23 17 58 52 32 45 39 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A2U1NXR5_ARTAN) Solyc04g080490.4 203 760 704 752 1083 1000 968 998 484 317 496 605 418 666 280 Zinc-finger homeodomain protein 6 (AHRD V3.3 *** A0A2G2ZS78_CAPAN) Solyc04g080500.3 60 43 2 3 2 2 1 9 1 7 1 8 0 2 2 Protein RADIALIS-like 6 (AHRD V3.3 *** A0A1U8GBN0_CAPAN) Solyc04g080510.3 9 2 0 5 6 8 4 2 6 3 26 7 5 2 0 CBS domain-containing protein (AHRD V3.3 *** A0A1Q3CAG9_CEPFO) AT1G47271 Solyc04g080520.1 330 258 522 727 369 373 327 299 310 585 808 295 230 404 689 proteoglycan 4 (AHRD V3.3 *-* A0A2I4DDT3_9ROSI) AT1G75260 Solyc04g080530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A200Q992_9MAGN) Solyc04g080540.2 521 58 4 19 0 0 0 0 17 47 16 3 21 53 42 DNA polymerase epsilon catalytic subunit A (AHRD V3.3 *** AT1G19530.2) AT1G19530 Solyc04g080550.4 7 14 18 13 15 15 21 17 9 12 10 10 0 8 65 Isoflavone reductase-like protein (AHRD V3.3 *** A0A2G2V5Y4_CAPBA) AT1G75290 Solyc04g080560.2 0 0 0 0 0 0 1 5 0 0 0 0 0 6 0 Unknown protein Solyc04g080570.3 1139 2096 2234 1998 2379 2569 2361 2374 1729 1862 2010 1821 2296 2081 1766 GAMMA carbonic anhydrase (AHRD V3.3 *** G5DWW7_SILLA) AT1G47260 Solyc04g080580.3 1387 1276 2182 2251 1593 1790 1566 1773 3470 2178 1907 1686 2253 2406 2547 Carbohydrate kinase-like (AHRD V3.3 *** Q657Z1_ORYSJ) AT1G19600 Solyc04g080590.4 1099 1753 1571 1159 1537 1291 1423 1569 1580 1425 1176 1414 1890 1749 1474 Proteasome subunit alpha type (AHRD V3.3 *** A0A2G2ZSB0_CAPAN) AT5G42790 Solyc04g080600.3 2637 2265 2760 1876 2067 2327 2082 2131 3108 2220 2859 1977 2132 2413 2179 Auxilin-like protein 1 (AHRD V3.3 *** A0A2G2V5U3_CAPBA) AT1G75310 Solyc04g080610.3 625 779 699 615 756 636 622 703 737 707 484 760 854 852 515 Ornithine carbamoyltransferase (AHRD V3.3 *** A0A1U8GBM0_CAPAN) AT1G75330 Solyc04g080620.3 5 23 3 37 148 86 70 43 21 15 3 15 37 10 2 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** A0A2I0WI30_9ASPA) Solyc04g080630.4 518 707 819 608 938 826 772 1008 871 580 658 746 500 678 676 50S ribosomal protein L31 (AHRD V3.3 *** A0A2G3AXB2_CAPCH) AT1G75350 Solyc04g080640.1 132 44 52 58 24 32 23 22 35 48 50 28 49 71 97 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit (AHRD V3.3 *** AT5G66440.1) Solyc04g080650.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200QE46_9MAGN) AT1G19630 Solyc04g080660.4 0 0 10 11 2 0 1 0 5 5 2 12 0 0 10 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PMX3_ARTAN) AT1G19640 Solyc04g080670.3 294 227 310 315 261 358 359 271 320 273 398 257 271 245 326 Inositol-pentakisphosphate 2-kinase (AHRD V3.3 *** A0A2G2W2M9_CAPBA) AT5G42810 Solyc04g080680.4 74 82 52 57 91 71 45 75 94 106 71 95 136 75 108 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NGY3_ARTAN) Solyc04g080690.3 1 0 0 4 0 0 3 2 2 5 22 6 0 4 1 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *-* A0A2U1MGM1_ARTAN) Solyc04g080700.4 1682 415 669 521 199 235 202 140 634 2002 1163 589 349 564 693 Bifunctional nuclease 2 (AHRD V3.3 *** A0A2G3AX92_CAPCH) AT1G19660 Solyc04g080710.4 224 278 283 413 606 598 639 588 357 192 270 236 350 366 174 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A1I9LLG7_ARATH) AT1G27660 Solyc04g080720.4 464 1461 992 1930 2787 1986 2081 1682 1504 1374 782 1148 1496 1363 1051 Transferase (AHRD V3.3 *** A0A200QE34_9MAGN) AT1G27620 Solyc04g080730.3 1776 1686 1799 2230 1898 1993 2024 1754 2198 1994 1998 1985 2026 1991 2085 mitogen-activated protein kinase 9 AT1G59580 Solyc04g080740.1 384 662 1303 779 1313 1466 1397 943 934 370 1291 563 1124 995 997 BZIP transcription factor (AHRD V3.3 *** I6MK31_PRUPE) AT4G34590 Solyc04g080750.4 78 158 243 148 123 139 93 75 153 125 140 127 149 103 141 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (AHRD V3.3 *** F4HWQ7_ARATH) AT1G35180 Solyc04g080760.3 7 36 17 27 37 39 39 43 35 25 63 42 36 28 5 Peroxidase (AHRD V3.3 *** K4BVF5_SOLLC) AT1G44970 Solyc04g080770.3 1064 835 797 801 497 548 673 531 673 782 785 584 827 881 1066 GTPase HflX (AHRD V3.3 *** A0A1J3I182_NOCCA) AT5G57960 Solyc04g080780.2 28 76 54 130 187 131 109 161 92 25 67 103 39 77 12 bell-like homeodomain protein 1 AT1G75430 Solyc04g080790.3 714 431 327 348 351 382 326 318 403 517 383 279 369 474 652 BEL1-like homeodomain protein 7 (AHRD V3.3 *** A0A2G3AXA7_CAPCH) AT1G75410 Solyc04g080800.4 552 684 487 618 472 401 486 527 446 575 418 540 531 637 638 Ribosomal RNA small subunit methyltransferase I (AHRD V3.3 *** A0A1J3HVJ1_NOCCA) AT1G45110 Solyc04g080810.4 382 506 594 870 591 556 585 497 526 595 522 513 911 771 977 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QE21_9MAGN) AT1G75440 Solyc04g080820.2 101 53 13 173 32 9 14 28 42 46 63 26 141 115 63 cytokinin oxidase4 AT1G75450 Solyc04g080830.4 146 72 95 105 138 174 179 143 153 169 106 172 38 68 179 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8GAX9_CAPAN) AT1G19720 Solyc04g080840.3 0 3 0 0 0 4 1 4 0 0 0 0 0 2 0 Beta-galactosidase (AHRD V3.3 *** A0A2G2X180_CAPBA) AT1G45130 Solyc04g080850.3 769 774 1381 1033 743 741 691 681 1380 1755 1313 1178 1118 1195 851 Thioredoxin (AHRD V3.3 *** Q201Z4_9SOLN) Solyc04g080860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g080870.1 264 239 174 182 140 267 199 189 183 166 207 220 220 146 317 Lon protease 2 (AHRD V3.3 *-* A0A2U1KJ29_ARTAN) Solyc04g080873.1 585 1622 1259 1289 1548 1822 1713 1398 1767 1339 930 1968 2087 1984 1297 Xylem cysteine proteinase 1 (AHRD V3.3 *** A0A1U8GAZ9_CAPAN) AT1G09850 Solyc04g080877.1 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* Q9LV19_ARATH) Solyc04g080890.4 2 0 0 0 0 0 0 1 3 0 1 0 2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9LV19_ARATH) Solyc04g080900.3 240 326 328 239 365 366 304 369 360 294 301 263 285 327 263 GTPase OBG (AHRD V3.3 *-* A0A2K3KZU3_TRIPR) Solyc04g080910.1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Dehydration-responsive element-binding protein 2C (AHRD V3.3 *** A0A1U8GAV5_CAPAN) AT1G75490 Solyc04g080915.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g080920.3 6 13 11 18 5 3 15 18 24 21 4 16 24 15 48 Purple acid phosphatase (AHRD V3.3 *** K4BVH1_SOLLC) Solyc04g080930.4 1063 813 809 717 763 715 797 517 603 659 810 629 710 746 998 Peroxisome biogenesis factor 10 (AHRD V3.3 *** A0A2G2YWQ5_CAPAN) AT2G26350 Solyc04g080940.4 38 168 72 120 109 91 84 98 191 60 98 131 109 131 174 WAT1-related protein (AHRD V3.3 *** K4BVH3_SOLLC) AT1G75500 Solyc04g080950.3 214 227 223 131 138 152 163 152 173 147 136 138 213 189 213 hypothetical protein (AHRD V3.3 *** AT5G43680.2) AT5G43680 Solyc04g080960.4 17020 10871 12404 13049 10508 9983 8953 10637 19291 21889 14025 18213 16628 16424 16747 pre-pro-cysteine proteinase Solyc04g080970.4 367 425 1016 811 957 965 831 730 450 561 1013 755 490 440 452 Protein SHI RELATED SEQUENCE 1 (AHRD V3.3 *** A0A2G3CQY9_CAPCH) Solyc04g080980.2 2659 4127 2971 3128 4130 3917 3920 4478 4504 3199 3067 3718 4386 4034 3291 Coatomer subunit alpha (AHRD V3.3 *** A0A2G3CQY1_CAPCH) AT1G62020 Solyc04g080990.2 1 0 5 3 0 1 5 4 1 4 0 0 6 0 7 S-type anion channel SLAH1 (AHRD V3.3 *** A0A2G3CQY6_CAPCH) Solyc04g081000.3 556 536 892 701 129 223 75 103 95 449 19 548 42 334 276 Deficiens AT3G54340 Solyc04g081010.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g081020.3 22 11 29 2 13 3 5 5 4 5 9 7 6 15 12 B-box zinc finger protein 24 (AHRD V3.3 *** A0A2G3CQV9_CAPCH) AT1G75540 Solyc04g081030.3 1158 1447 1069 860 939 1013 937 1081 1053 794 811 945 1731 1316 999 Protein disulfide-isomerase 5-3 (AHRD V3.3 *** A0A2G2X164_CAPBA) AT3G49990 Solyc04g081040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g081050.2 592 747 839 729 1002 980 993 1119 1078 824 764 969 689 690 571 Calcium-binding tetratricopeptide family protein (AHRD V3.3 *** A0A2U1KJ59_ARTAN) AT1G05150 Solyc04g081055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc04g081060.3 180 139 193 181 167 180 136 135 144 132 240 192 105 152 183 Kinesin-like protein NACK1 (AHRD V3.3 *** A0A2G2X190_CAPBA) Solyc04g081070.3 1464 1338 1361 1290 1419 1305 1213 1667 1912 1611 1267 1951 1253 1391 1288 Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic (AHRD V3.3 *** A0A2G3CQW7_CAPCH) AT5G42480 Solyc04g081080.1 99 578 503 669 1840 2009 1778 2255 595 331 488 1207 150 461 242 Receptor-like protein kinase (AHRD V3.3 *** A0A0A0KGM3_CUCSA) AT1G75640 Solyc04g081090.3 811 1525 1551 1831 1805 1731 1778 1617 1390 1200 1514 1322 1577 1418 1579 V-type proton ATPase proteolipid subunit (AHRD V3.3 *** A0A2G3AAA7_CAPAN) AT1G19910 Solyc04g081100.3 1060 1149 1092 965 979 1092 1189 1169 1188 973 828 891 985 1196 1019 Lysine-specific histone demethylase 1-like protein 3 (AHRD V3.3 *** A0A2G2ZSD5_CAPAN) AT4G16310 Solyc04g081110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glyoxal oxidase (AHRD V3.3 *** A0A200QQ43_9MAGN) AT1G75620 Solyc04g081120.1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Glyoxal oxidase (AHRD V3.3 *** A0A200QQ43_9MAGN) AT1G75620 Solyc04g081130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glyoxal oxidase (AHRD V3.3 *** A0A200QQ43_9MAGN) AT1G75620 Solyc04g081140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glyoxal oxidase-related protein (AHRD V3.3 *** A0A2U1MRW9_ARTAN) AT1G75620 Solyc04g081145.1 403 974 844 803 1121 1110 1231 1290 763 579 849 809 1161 913 674 Histone H3 (AHRD V3.3 *-* A0A2P6VKJ7_9CHLO) AT4G40030 Solyc04g081160.3 252 328 437 432 535 729 575 464 312 371 432 448 457 471 315 Cell growth defect factor 2 (AHRD V3.3 *** B6T7D5_MAIZE) AT1G30845 Solyc04g081170.3 2400 1803 2325 1871 1597 1853 1739 1473 1638 1775 2431 1804 1963 1878 1889 GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN91_SOLLC) AT5G42520 Solyc04g081180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g081190.3 591 437 488 564 411 393 389 380 554 432 521 456 624 603 551 vsf-1 Solyc04g081200.3 1166 1833 1792 1529 2482 2518 2418 2378 1281 1200 1807 1489 2140 1823 1331 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** F4HQZ1_ARATH) AT1G19880 Solyc04g081210.4 2960 2988 3005 2769 3874 3764 3664 4265 4341 3737 3119 3843 2691 2656 3298 SUN-like protein 14 AT1G19870 Solyc04g081220.3 380 1380 1371 1063 1867 1693 1358 1332 1285 661 1015 1156 1972 1582 1156 39S ribosomal protein (AHRD V3.3 *** Q940G3_ARATH) AT5G39600 Solyc04g081230.3 869 585 607 701 422 502 471 474 667 530 603 446 768 729 1359 TLD-domain containing nucleolar protein (AHRD V3.3 *** A0A2U1P606_ARTAN) AT5G39590 Solyc04g081240.2 2227 3052 5346 4981 4820 5403 4619 5620 3960 3725 2117 6105 2222 4628 2244 Auxin Response Factor 5 AT1G19850 Solyc04g081250.1 18 81 41 129 124 106 56 101 97 43 63 92 62 156 44 Small auxin up-regulated RNA51 AT1G75590 Solyc04g081260.3 483 1468 1642 1381 2018 2063 1970 1996 2376 1359 1660 1585 1264 1186 2139 filament-like plant protein 4 (AHRD V3.3 *** A0A1U7XPP3_NICSY) AT1G47900 Solyc04g081270.1 7 7 65 42 16 12 13 9 20 21 16 45 34 35 31 Small auxin up-regulated RNA52 Solyc04g081280.3 4456 3574 2987 3148 2855 2744 2944 2887 2813 3073 3023 2788 3364 3368 3385 5'-3' exoribonuclease (AHRD V3.3 *** A0A2G2X1B3_CAPBA) AT1G75660 Solyc04g081290.3 1456 392 56 272 56 38 57 46 156 555 175 86 197 132 378 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** A0A2G2X1Q5_CAPBA) Solyc04g081300.4 556 1089 830 1512 1025 950 964 1111 1647 1752 1121 1222 1175 815 1842 Endoglucanase (AHRD V3.3 *** A0A2G3CQE2_CAPCH) AT1G19940 Solyc04g081310.3 372 459 379 365 321 382 349 378 391 309 270 398 453 421 319 Diphthine synthase (AHRD V3.3 *** A0A1U8GJU3_CAPAN) AT4G31790 Solyc04g081320.4 320 459 369 399 984 711 884 634 385 407 420 334 250 296 404 Protein disulfide-isomerase LQY1, chloroplastic (AHRD V3.3 *** LQY1_ARATH) AT1G75690 Solyc04g081330.4 650 499 496 479 462 513 496 431 517 412 512 389 474 454 615 DUF3119 domain-containing protein (AHRD V3.3 *** A0A1Q3BKA3_CEPFO) Solyc04g081340.3 2102 1538 1610 1862 2111 2039 2010 2102 1476 1995 2041 1552 1046 1182 1454 HVA22-like protein (AHRD V3.3 *** A0A2G2X1J7_CAPBA) AT5G42560 Solyc04g081350.3 10 111 76 92 112 106 120 107 84 79 57 97 71 83 55 Transcription factor E2FC (AHRD V3.3 *** M5BC45_TOBAC) Solyc04g081360.3 530 736 725 482 457 545 617 535 461 396 456 512 1078 787 519 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 (AHRD V3.3 *** A0A2G2X1K9_CAPBA) AT2G45730 Solyc04g081370.2 904 755 495 541 510 471 424 423 672 851 685 703 864 676 649 C2H2-like zinc finger protein (AHRD V3.3 *** A0A2U1KP34_ARTAN) AT1G75710 Solyc04g081380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BnaAnng09000D protein (AHRD V3.3 *** A0A078IBI0_BRANA) AT1G75717 Solyc04g081390.4 13 15 15 18 32 27 11 15 18 13 43 4 9 13 23 WEB family protein (AHRD V3.3 *** A0A2I0VRX2_9ASPA) AT1G75720 Solyc04g081400.3 304 506 449 470 673 630 605 613 546 422 517 370 472 402 638 plastidic hexokinase AT1G47840 Solyc04g081410.3 350 548 754 693 902 1011 1021 721 669 605 816 698 701 574 658 AP complex subunit sigma (AHRD V3.3 *** A0A2G2ZSI5_CAPAN) AT1G47830 Solyc04g081420.4 442 417 596 763 702 798 731 710 477 402 544 445 468 573 777 hypothetical protein (AHRD V3.3 *** AT1G75730.2) AT1G75730 Solyc04g081430.3 927 824 867 799 826 695 726 720 728 898 756 784 860 866 781 Mediator of RNA polymerase II transcription subunit 7 (AHRD V3.3 *** A0A328E8P0_9ASTE) AT5G03220 Solyc04g081440.3 6661 3374 2670 2590 2750 2615 2344 2568 2843 4202 2634 2748 3106 2575 2768 beta-fructofuranosidase Solyc04g081450.3 231 249 343 255 388 360 320 357 299 217 250 323 249 210 230 cytomatrix protein-like protein (AHRD V3.3 *** AT1G19980.1) AT1G19980 Solyc04g081460.2 137 74 86 182 22 26 27 13 32 33 105 23 57 117 208 F-box protein (AHRD V3.3 *-* XP_012084459.1) Solyc04g081470.4 381 715 811 652 825 785 712 827 718 494 682 788 913 691 632 hypothetical protein (AHRD V3.3 *-* AT5G11600.2) AT1G19990 Solyc04g081480.3 395 261 113 189 97 157 155 95 211 233 205 157 262 242 257 Unknown protein Solyc04g081490.3 1753 5435 3729 4042 5015 4609 5324 5514 7294 4554 4741 5179 4474 4967 4393 beta-tubulin AT1G75780 Solyc04g081500.3 972 748 775 853 994 755 829 977 729 906 665 944 670 593 654 BRCA1-A complex subunit BRE (AHRD V3.3 *** A0A1J3IFN2_NOCCA) AT5G42470 Solyc04g081510.4 1066 852 905 776 673 565 598 641 920 874 862 670 1163 818 607 DUF668 domain-containing protein/DUF3475 domain-containing protein (AHRD V3.3 *** A0A1Q3AMJ7_CEPFO) Solyc04g081520.3 0 0 0 3 0 0 0 0 0 0 1 0 1 0 1 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A1U8DYA0_CAPAN) AT1G75790 Solyc04g081530.1 618 242 468 220 163 91 206 123 156 867 408 253 121 100 316 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G3CQH5_CAPCH) Solyc04g081540.3 154 345 301 376 231 337 345 316 284 194 295 285 359 373 515 kinesin-like protein (AHRD V3.3 *** AT4G24175.1) AT4G24175 Solyc04g081550.3 759 627 656 1080 704 774 715 643 597 491 1149 481 601 784 1401 Thaumatin-like protein 1 (AHRD V3.3 *** A0A2G3CQG2_CAPCH) AT1G75800 Solyc04g081560.3 44 25 34 51 44 35 40 30 37 43 83 42 37 57 27 thaumatin-like protein (AHRD V3.3 *** A0A2I4DP68_9ROSI) AT4G24180 Solyc04g081570.3 9484 10822 6100 4579 7333 5784 5805 7681 7420 6767 4937 7466 19523 11433 7714 Heat shock protein 90 (AHRD V3.3 *-* A0A0A7LYT2_ALBBR) AT4G24190 Solyc04g081580.4 1383 2136 1831 1215 1114 1180 1110 1108 1267 811 1159 1068 2691 2449 1870 RNA helicase DEAD15 Solyc04g081590.4 518 800 1156 1299 929 1087 822 919 1552 1112 1146 1327 756 736 1030 Receptor protein kinase (AHRD V3.3 *** A0A2R6R3P4_ACTCH) AT1G75820 Solyc04g081600.3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc04g081610.1 19 19 27 21 43 28 29 37 21 25 38 13 8 27 25 Unknown protein Solyc04g081620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g081630.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heat shock protein 90 (AHRD V3.3 *-* A0A0A7LYT2_ALBBR) Solyc04g081640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoplasmin (AHRD V3.3 *-* A0A2I0X888_9ASPA) Solyc04g081650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cyclin (AHRD V3.3 *-* A0A200PQW1_9MAGN) Solyc04g081660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cyclinB2_3 Solyc04g081670.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *-* A0A1U8EUN8_CAPAN) Solyc04g081675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase zinc-binding domain (AHRD V3.3 *-* A0A200R757_9MAGN) Solyc04g081690.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g081700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g081710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc04g081720.2 65 27 47 24 40 59 46 42 43 40 37 44 32 50 35 Unknown protein Solyc04g081730.3 2937 3241 6914 3884 2548 3350 3478 1878 2491 1627 6840 2108 4623 4577 6820 DNA ligase (AHRD V3.3 -** AT1G75860.1) AT1G75860 Solyc04g081740.3 631 1078 1004 746 779 819 941 658 679 574 889 706 1111 1094 874 prostaglandin E synthase 2-like (AHRD V3.3 *** A0A2I4DI11_9ROSI) AT5G42150 Solyc04g081750.4 3049 3044 1886 3307 3157 2231 2758 3820 2926 4607 2367 3322 3292 2709 1763 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A (AHRD V3.3 *** A0A2I0X875_9ASPA) AT1G20110 Solyc04g081755.2 216 122 153 198 2 13 3 6 84 109 132 104 82 86 256 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2ZSP1_CAPAN) AT1G75900 Solyc04g081770.4 223 123 66 178 4 17 11 12 70 59 106 41 94 104 447 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2ZSP1_CAPAN) AT1G75900 Solyc04g081780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase EXL3-like (AHRD V3.3 *** A0A1U8GJR0_CAPAN) Solyc04g081790.3 12 36 40 63 78 77 94 84 59 31 56 40 29 45 13 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6PZI7_ACTCH) Solyc04g081800.3 0 10 4 11 2 2 0 3 10 1 20 8 2 6 13 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6PZI7_ACTCH) Solyc04g081810.4 2 45 41 190 15 22 18 29 102 32 9 2 106 42 77 Subtilisin-like protease-like protein (AHRD V3.3 *** A0A2K3N634_TRIPR) AT1G20160 Solyc04g081820.3 2583 3335 2847 3158 3166 3266 3472 3452 2512 2482 2263 2621 3508 3398 2395 la-related protein 1C-like (AHRD V3.3 *** A0A2I4H6L2_9ROSI) Solyc04g081830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A328CVV5_9ASTE) Solyc04g081840.4 17 4 1 0 0 2 0 2 0 4 27 4 6 9 0 UPF0496 protein isoform X1 (AHRD V3.3 *** A0A2I4H6K4_9ROSI) AT1G20180 Solyc04g081850.4 193 332 470 374 408 428 471 394 372 286 458 449 381 407 379 Single hybrid motif superfamily protein (AHRD V3.3 *** AT1G75980.1) AT1G75980 Solyc04g081860.3 1 0 8 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4BVR5_SOLLC) AT5G42180 Solyc04g081870.4 322 768 363 1492 640 588 511 545 1348 1270 832 403 647 652 1837 Expansin A11 AT1G20190 Solyc04g081880.4 7542 6585 5971 4627 4933 5762 5352 5190 4646 4188 5194 4618 7890 6970 5590 DNA/RNA-binding protein Alba-like protein (AHRD V3.3 *-* A0A2U1M9H1_ARTAN) AT1G76010 Solyc04g081890.1 29 138 306 123 147 178 162 117 116 46 416 64 59 63 148 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1PXB9_ARTAN) AT5G42200 Solyc04g081900.4 1202 751 1170 1248 682 776 715 600 1135 1070 982 1008 1168 1435 2778 Thioredoxin_8 domain-containing protein (AHRD V3.3 *** A0A1Q3C5I0_CEPFO) Solyc04g081910.4 1894 957 5281 1750 418 484 313 242 549 2313 5884 792 2138 1498 2028 Calcium-dependent protein kinase (AHRD V3.3 *** Q8RW36_SOLLC) AT1G76040 Solyc04g081920.3 447 431 481 419 370 403 411 323 307 302 472 306 360 413 343 Pseudouridine synthase (AHRD V3.3 *** A0A2G2V5B2_CAPBA) AT1G76050 Solyc04g081930.3 170 238 273 205 232 226 247 244 236 213 183 274 281 299 223 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1PY84_ARTAN) AT1G20270 Solyc04g081940.3 143 121 133 134 112 166 123 136 125 171 172 136 158 121 118 Complex 1 LYR protein (AHRD V3.3 *** A0A2U1NHM6_ARTAN) AT1G76060 Solyc04g081950.4 362 460 318 369 363 310 356 393 344 235 312 310 431 425 260 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A1U8GB35_CAPAN) AT1G20300 Solyc04g081960.1 205 68 94 107 15 19 34 15 100 114 204 80 94 114 127 Syringolide-induced protein 14-1-1 (AHRD V3.3 *** A0A2K3M7L2_TRIPR) AT1G76070 Solyc04g081970.3 730 1355 697 786 994 766 736 859 1107 1012 455 1039 1411 1052 551 Thioredoxin (AHRD V3.3 *** A0A200QEF8_9MAGN) AT1G76080 Solyc04g081980.2 192 122 108 128 123 116 110 97 102 166 73 117 146 109 91 Glycerate dehydrogenase HPR, peroxisomal (AHRD V3.3 *-* A0A2G2VXK2_CAPBA) Solyc04g081990.3 126 162 119 162 96 78 157 106 114 182 114 83 178 164 158 Major facilitator superfamily (AHRD V3.3 *** A0A2U1P5G0_ARTAN) AT2G16980 Solyc04g082000.4 6 13 43 21 15 27 15 19 8 18 7 17 10 22 46 Phospholipase D (AHRD V3.3 *** K4BVS9_SOLLC) Solyc04g082010.1 2083 5290 3431 4333 7129 7024 8161 6914 4370 4215 3391 4270 2580 2613 3941 pre-plastocyanin AT1G20340 Solyc04g082020.3 483 417 433 528 398 323 313 412 481 732 443 577 497 385 484 Zinc finger, DNL-type, Mitochondrial import protein TIM15 (AHRD V3.3 *** A0A2U1M1T5_ARTAN) AT5G27280 Solyc04g082030.1 452 4344 3723 3291 9815 8560 8426 10393 7943 6175 3751 7623 2882 5047 4430 ornithine decarboxylase Solyc04g082040.3 366 432 381 405 427 458 458 523 506 436 339 443 411 557 427 Mechanosensitive ion channel protein (AHRD V3.3 *** A0A2G3CQP0_CAPCH) Solyc04g082050.3 509 420 339 441 1334 1297 958 1278 463 363 362 417 393 674 1144 Cellular retinaldehyde-binding/triple function, C-terminal (AHRD V3.3 *** B6SN40_MAIZE) Solyc04g082060.4 259 93 175 184 129 132 99 135 179 276 300 89 141 122 200 F-box protein SKIP23-like (AHRD V3.3 *** A0A2I4DIK7_9ROSI) Solyc04g082070.4 706 1012 861 782 1048 1014 954 1054 779 695 569 773 1153 1232 672 tRNA pseudouridine synthase family protein (AHRD V3.3 *-* E5GCD2_CUCME) AT1G20370 Solyc04g082080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200QCQ8_9MAGN) Solyc04g082090.3 401 482 526 726 568 779 665 624 838 608 635 640 484 604 742 Alpha-amylase (AHRD V3.3 *** K4BVT6_SOLLC) AT1G76130 Solyc04g082110.4 627 1052 1126 1144 1678 1520 1460 1441 1155 973 1082 1118 1022 1145 1106 Rop guanine nucleotide exchange factor 1 (AHRD V3.3 *** A0A2G3CQR2_CAPCH) Solyc04g082120.3 234 1193 7786 5296 33 17 38 19 150 421 424 124 640 614 251 Prolyl oligopeptidase (AHRD V3.3 *** H2D7F1_COFAR) AT1G76140 Solyc04g082130.4 508 568 460 485 465 505 562 529 515 412 450 490 668 664 462 Pseudouridine synthase family protein (AHRD V3.3 *** A0A2U1N9V5_ARTAN) AT1G20410 Solyc04g082140.3 1631 18764 18509 10093 9033 7360 8865 9872 24480 12750 25345 12389 13994 10962 14171 pectinesterase AT1G76160 Solyc04g082150.1 57 57 111 103 13 13 23 19 243 66 171 81 52 108 115 Unknown protein Solyc04g082155.1 24 22 68 26 11 13 23 3 75 10 135 26 60 63 71 Unknown protein Solyc04g082160.4 5011 3053 2425 2105 1805 1741 1788 1883 2088 2930 1950 1874 2670 2454 2416 Ubiquitin (AHRD V3.3 *** A0A2U1QEA1_ARTAN) AT5G42220 Solyc04g082170.3 6 3 6 2 9 15 11 12 3 0 7 7 3 6 9 Alcohol dehydrogenase ADH (AHRD V3.3 *** Q41241_SOLLC) AT5G42250 Solyc04g082180.4 0 0 0 1 6 5 2 3 2 0 1 0 1 0 0 Alcohol dehydrogenase ADH (AHRD V3.3 *** Q41242_SOLLC) AT5G42250 Solyc04g082190.1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 Neutral ceramidase (AHRD V3.3 *** A0A2G2ZSR2_CAPAN) Solyc04g082200.2 4763 2138 13620 2615 1199 1031 792 760 3805 9108 16164 1533 2533 3290 14871 dehydrin AT1G20440 Solyc04g082210.3 443 145 292 314 135 145 133 103 137 283 326 215 152 214 520 NADH-ubiquinone oxidoreductase chain (AHRD V3.3 *** AT1G76185.1) Solyc04g082220.3 286 238 122 126 47 34 43 50 160 414 182 95 272 90 108 Lysine histidine transporter-like 8 (AHRD V3.3 *** A0A2G2X1G9_CAPBA) Solyc04g082230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SAUR-like auxin-responsive protein family (AHRD V3.3 *** Q9SGR4_ARATH) AT1G76190 Solyc04g082235.1 302 477 730 546 767 715 798 674 558 387 569 543 626 540 609 Unknown protein Solyc04g082240.1 3 6 1 3 0 0 0 0 4 6 1 0 5 0 0 DUF241 domain protein, putative (DUF241) (AHRD V3.3 *** Q9LMV9_ARATH) AT1G76210 Solyc04g082250.3 1504 2734 1570 1883 2596 2144 2292 3447 2966 2635 1521 3096 1721 1879 1476 FtsH-like protein precursor AT5G42270 Solyc04g082260.4 1221 1499 1704 1444 1756 1698 1469 1578 1560 1129 1328 1540 2051 1807 1461 Protein kinase domain (AHRD V3.3 *** A0A200QYY3_9MAGN) AT4G35230 Solyc04g082270.3 5 17 56 17 42 45 35 19 19 12 63 10 10 12 34 DUF241 domain-containing protein (AHRD V3.3 *** A0A1Q3B6H2_CEPFO) AT1G76240 Solyc04g082280.3 666 365 246 306 339 313 293 320 170 392 242 230 167 218 257 At1g76250 (AHRD V3.3 *** Q8GX25_ARATH) AT1G76250 Solyc04g082290.4 1979 648 273 425 1024 1148 966 919 493 1125 297 692 332 341 364 inactive purple acid phosphatase-like protein (AHRD V3.3 *** AT1G42430.1) AT1G42430 Solyc04g082300.2 1754 1004 1118 1043 861 879 1027 894 919 1150 1114 1100 898 1057 1256 WD40 repeat (AHRD V3.3 *** A0A200PXT2_9MAGN) AT1G20540 Solyc04g082310.3 625 996 936 886 902 959 1099 804 812 600 692 829 929 1080 890 hypothetical protein (AHRD V3.3 *** AT1G63610.1) AT1G63610 Solyc04g082320.3 597 505 582 521 471 572 587 513 417 465 418 473 440 570 515 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QNE8_9MAGN) AT1G76280 Solyc04g082330.3 2213 2691 1816 1542 1573 1494 1665 1758 1503 1426 1473 1547 2760 2474 1847 pre-rRNA-processing protein TSR1 homolog (AHRD V3.3 *** A0A2I4FXL1_9ROSI) AT1G42440 Solyc04g082340.3 296 428 501 485 429 459 544 425 580 379 436 482 397 571 481 Zn-dependent exopeptidases superfamily protein (AHRD V3.3 *** A0A1R7T3D6_ARATH) AT5G42320 Solyc04g082350.2 0 0 0 0 0 4 0 5 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1NYH9_ARTAN) Solyc04g082355.1 63 466 643 1417 1962 2055 2130 1682 410 270 481 524 53 305 327 Unknown protein Solyc04g082360.2 183 170 223 247 249 218 264 198 207 155 246 201 314 353 272 F-box protein (AHRD V3.3 *** A0A2I0VRX1_9ASPA) AT1G69090 Solyc04g082380.4 169 1017 665 1007 2260 1837 1605 2367 747 590 613 1386 215 524 261 cytochrome P450 86A8-like (AHRD V3.3 *-* A0A2I4DDX4_9ROSI) Solyc04g082390.3 235 317 323 327 490 504 394 400 428 297 331 448 407 349 251 Dolichol-phosphate mannosyltransferase, putative, expressed (AHRD V3.3 *** Q10BB4_ORYSJ) AT1G20575 Solyc04g082400.3 1478 1351 1205 1352 1675 1350 1470 1743 1757 1612 1264 1618 1360 1382 1468 1,4-alpha-glucan-branching enzyme (AHRD V3.3 *** GLGB_SOLTU) Solyc04g082420.3 2685 569 708 488 774 997 893 833 594 1136 748 820 255 509 344 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A1U8GAB1_CAPAN) AT2G30600 Solyc04g082430.3 84 645 579 1092 1623 1774 1829 1693 749 536 767 949 136 466 418 cyclinB2_4 AT1G76310 Solyc04g082440.4 6 3 14 11 18 11 7 10 16 7 12 9 0 0 4 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CQU3_CAPCH) AT5G42340 Solyc04g082450.3 651 533 500 397 321 344 392 441 325 364 272 420 525 456 282 Integral membrane protein hemolysin-III-like protein (AHRD V3.3 *** A0A2K3N7X1_TRIPR) Solyc04g082460.4 1289 660 409 381 521 476 399 604 516 654 336 604 381 519 394 Catalase (AHRD V3.3 *** A0A2G2X1I6_CAPBA) Solyc04g082470.3 1524 1248 1146 1025 993 1038 946 1149 1005 1149 828 1149 1232 1069 950 WD40 repeat protein (AHRD V3.3 *** Q1JV02_IPONI) AT1G12910 Solyc04g082475.1 21 12 11 28 1 15 13 4 10 5 7 18 11 11 16 Catalase (AHRD V3.3 *-* A0A328DBH8_9ASTE) Solyc04g082480.3 139 319 154 273 206 180 190 197 244 147 56 132 157 63 49 Plant regulator RWP-RK family protein, putative (AHRD V3.3 *** A0A061FD78_THECC) AT1G20640 Solyc04g082490.3 1675 1273 1129 1087 879 960 1067 986 1228 1345 1444 953 1364 1171 1444 Niemann-Pick C1 protein-like (AHRD V3.3 *** A0A2I4DPI3_9ROSI) AT4G38350 Solyc04g082500.4 124 61 125 54 73 77 89 66 123 117 69 42 87 71 66 Protein kinase APK1B, chloroplastic (AHRD V3.3 *** A0A2G2X1F2_CAPBA) AT1G76360 Solyc04g082510.3 422 415 594 471 294 318 336 303 439 269 471 316 339 379 480 Protein kinase (AHRD V3.3 *** S8D6E4_9LAMI) AT1G20650 Solyc04g082520.3 9 0 27 10 7 13 6 5 4 12 13 3 11 2 0 cuticular water permeability 1 AT4G37420 Solyc04g082530.3 89 144 231 209 125 164 164 123 201 136 200 174 147 137 148 Bromodomain-containing protein (AHRD V3.3 *** A0A2U1N3G4_ARTAN) AT1G20670 Solyc04g082540.2 9 23 22 19 56 40 39 33 28 11 21 30 9 8 5 Transport/golgi organization-like protein (DUF833) (AHRD V3.3 *** F4JTM0_ARATH) Solyc04g082550.2 0 0 3 0 0 0 0 0 0 3 0 0 0 1 0 Trehalose 6-phosphate phosphatase (AHRD V3.3 *** A0A1U8GHC9_CAPAN) Solyc04g082560.4 1876 2348 1559 1598 1613 1690 1607 2034 2224 1821 1480 1766 2254 2155 1672 Calcium-binding ef-hand-containing protein (AHRD V3.3 *** A0A2K3NR85_TRIPR) AT1G20760 Solyc04g082570.3 1060 1074 1488 973 643 789 802 737 1047 1176 1158 770 1417 1158 861 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2X1J2_CAPBA) AT1G20780 Solyc04g082580.3 527 639 816 805 736 862 786 675 646 524 705 581 584 630 676 F-box/kelch-repeat protein (AHRD V3.3 *** A0A2G2X1H4_CAPBA) AT5G42350 Solyc04g082590.3 52 187 147 192 280 316 325 285 276 119 150 233 263 208 165 TLR4 regulator/MIR-interacting MSAP protein (AHRD V3.3 *** AT1G42480.1) AT1G42480 Solyc04g082600.3 1018 801 1015 939 1027 981 973 900 1017 860 796 869 854 933 1116 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1Q8J5_ARTAN) AT2G33700 Solyc04g082610.3 364 383 593 597 412 580 644 476 434 426 538 333 452 485 567 glutamate receptor like 3.3 AT1G42540 Solyc04g082620.3 908 516 476 608 411 390 439 398 579 612 638 492 551 679 567 Serine/threonine-protein kinase/endoribonuclease IRE1a (AHRD V3.3 *** A0A1U8GAT1_CAPAN) AT5G24360 Solyc04g082630.3 1960 6070 2067 3146 7468 5798 6561 7218 5446 4314 1673 3655 3922 2773 2182 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A2G2X1C8_CAPBA) AT1G42970 Solyc04g082640.3 397 702 717 751 984 947 965 965 716 546 657 809 853 844 697 inner membrane localized protein (AHRD V3.3 *-* AT1G42960.1) AT1G42960 Solyc04g082650.3 419 842 1070 1000 1318 1294 1331 1344 832 800 747 1031 819 756 767 S-acyltransferase (AHRD V3.3 *** A0A2G2XUG9_CAPAN) AT2G33640 Solyc04g082660.2 304 221 351 285 307 320 394 228 277 292 395 306 153 192 218 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G3CFL0_CAPCH) AT1G20810 Solyc04g082670.4 1420 2214 1720 1482 2007 1748 1689 2158 2158 1699 1386 1969 2464 2211 1749 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (AHRD V3.3 *** A0A2G3CFN4_CAPCH) AT1G76400 Solyc04g082680.3 1000 1275 1668 1362 1563 1547 1585 1064 921 912 1618 1139 1258 1094 1292 Outer envelope pore protein 21, chloroplastic (AHRD V3.3 *** A0A1U8GHM8_CAPAN) AT1G76405 Solyc04g082690.1 164 149 194 173 171 170 152 151 170 213 231 169 242 151 270 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN) AT1G20823 Solyc04g082700.3 979 1034 1325 1475 916 874 890 1001 1642 1282 1174 1539 1651 1484 1137 Tonoplast monosaccharide transporter 2 AT4G35300 Solyc04g082710.4 38 240 263 182 231 218 189 157 246 243 277 156 70 144 280 Papaya proteinase 4 (AHRD V3.3 *** A0A2G2ZSW4_CAPAN) AT4G35350 Solyc04g082720.3 578 615 691 568 903 879 819 746 510 402 720 687 675 643 638 Alpha-crystallin domain-containing protein 22.3 (AHRD V3.3 *** A0A1U8GRL0_CAPAN) AT1G76440 Solyc04g082730.2 53 33 12 20 16 15 17 11 20 13 5 17 9 25 42 Unknown protein Solyc04g082740.4 571 298 391 415 237 264 258 185 277 234 430 294 236 344 560 Alpha-crystallin domain-containing protein 22.3 (AHRD V3.3 *** A0A2G3CFM7_CAPCH) Solyc04g082745.1 64 34 37 50 20 22 23 22 47 47 20 22 20 41 17 Unknown protein Solyc04g082750.3 210 627 577 647 752 785 696 816 734 694 564 846 600 703 536 3-beta hydroxysteroid dehydrogenase/isomerase (AHRD V3.3 *** A0A200PR22_9MAGN) AT2G33630 Solyc04g082760.3 2290 2305 1780 2218 2447 1790 1608 2974 1818 2815 1743 2649 2444 2314 991 SWI/SNF complex subunit SWI3B (AHRD V3.3 *** A0A2G3CFP4_CAPCH) AT2G33610 Solyc04g082770.4 2475 1825 1784 2033 1463 1539 1722 1397 1363 1375 1741 1291 1783 1896 2152 RNA-binding protein 38-like (AHRD V3.3 *** A0A2I4G7F9_9ROSI) Solyc04g082780.3 888 1135 1314 1350 1482 1504 1420 1395 1555 1181 1184 1342 1038 1116 1263 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1KKT7_ARTAN) AT2G33590 Solyc04g082790.4 1322 1513 2350 1773 1886 1976 1885 1462 1593 1339 2092 1234 1749 1653 2037 RNA helicase DEAD16 AT3G53110 Solyc04g082800.3 130 130 147 118 110 116 119 77 91 95 131 55 195 129 148 subtilisin-like protease (AHRD V3.3 *** AT2G33585.1) AT2G33585 Solyc04g082810.4 88 117 90 104 64 53 54 64 65 69 36 36 106 85 210 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2G3CFM3_CAPCH) AT1G20900 Solyc04g082820.4 1241 2100 1824 1459 2322 2132 1978 2670 1918 1528 1553 1946 2541 2079 1323 ARID/BRIGHT DNA-binding domain (AHRD V3.3 *-* A0A200PS47_9MAGN) AT2G17410 Solyc04g082830.3 98 217 129 282 182 191 230 231 342 354 138 163 918 469 422 Auxin efflux carrier (AHRD V3.3 *** A0A200PR79_9MAGN) AT1G20925 Solyc04g082840.4 319 2695 2315 3514 6712 5234 5047 7260 3149 2435 2548 4774 700 1879 1414 B2-type cyclin dependent kinase AT1G20930 Solyc04g082845.2 276 232 175 264 168 196 187 179 180 177 168 199 236 272 167 Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2G2X1H3_CAPBA) Solyc04g082860.3 6 4 0 2 0 1 1 4 0 2 0 1 0 5 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4FMV0_9ROSI) Solyc04g082865.1 29 15 25 43 17 21 6 16 16 7 21 6 28 41 37 Unknown protein Solyc04g082870.1 54 48 7 20 20 7 12 15 41 31 24 25 52 53 17 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CQI3_CAPCH) AT1G25360 Solyc04g082880.4 313 866 537 661 667 619 660 732 659 361 340 580 851 799 520 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha (AHRD V3.3 *** A0A1U8GHK4_CAPAN) AT1G76550 Solyc04g082890.3 9669 5874 5874 5463 4871 4332 4099 4826 5613 8463 5807 6459 7410 6431 5206 BZIP transcription factor protein (AHRD V3.3 *** Q3L0T7_CAPAN) AT1G42990 Solyc04g082900.4 313 730 690 977 1471 1507 1555 1775 857 625 895 1011 316 574 559 Mitotic spindle checkpoint protein BUBR1 (AHRD V3.3 *** A0A2G2ZSY7_CAPAN) AT2G33560 Solyc04g082910.1 863 544 685 645 700 756 638 724 823 691 735 590 516 409 740 Calvin cycle protein CP12-3, chloroplastic (AHRD V3.3 *** A0A1U8GJB3_CAPAN) Solyc04g082915.1 23 6 26 48 8 32 33 15 13 19 32 11 9 14 22 Unknown protein Solyc04g082920.4 385 270 346 464 432 406 577 456 297 309 199 243 229 342 414 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3NBQ9_TRIPR) Solyc04g082930.3 32 66 31 70 62 98 101 64 61 70 76 76 28 45 38 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *-* A0A1U8GA31_CAPAN) Solyc04g082940.3 92 127 185 170 74 59 79 70 81 76 97 71 139 83 179 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** F4HWC5_ARATH) AT1G20990 Solyc04g082950.4 365 904 921 961 1474 1587 1420 1355 988 821 690 859 722 698 662 galactan beta-1,4-galactosyltransferase GALS1 (AHRD V3.3 *** A0A2I4GGQ8_9ROSI) AT2G33570 Solyc04g082960.1 929 321 441 186 29 11 5 11 103 99 984 150 558 344 656 Poly polymerase (AHRD V3.3 *** Q9C9J8_ARATH) AT1G76600 Solyc04g082970.4 205 696 505 750 948 769 1041 922 1258 538 701 706 585 606 631 electron transporter%2C putative (Protein of unknown function%2C DUF547) (AHRD V3.3 *** AT5G66600.9) AT1G21060 Solyc04g082980.2 1047 976 664 661 1005 939 918 1092 856 818 633 799 660 815 681 Tetratricopeptide repeat protein SKI3 (AHRD V3.3 *** A0A2G2ZSZ3_CAPAN) AT1G76630 Solyc04g082990.3 662 501 864 761 644 892 861 498 320 399 747 549 519 514 724 Tetratricopeptide repeat protein SKI3 (AHRD V3.3 *-* A0A2G2ZSZ3_CAPAN) Solyc04g083000.1 23 4 18 0 0 6 1 1 8 3 6 0 7 2 1 Unknown protein Solyc04g083010.4 1125 854 555 743 714 708 864 708 852 991 682 763 542 530 674 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1MH67_ARTAN) AT1G79600 Solyc04g150173.1 6 9 1 6 17 11 5 4 5 5 15 4 7 9 5 dihydroorotate dehydrogenase (AHRD V3.3 *-* AT4G01897.1) Solyc05g004000.1 222 120 159 275 56 68 47 42 112 142 247 182 89 104 131 B3 domain-containing protein (AHRD V3.3 *** A0A2G3DAB0_CAPCH) AT2G46870 Solyc05g004003.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g004007.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g005000.4 1215 582 849 472 771 916 907 829 542 921 992 617 333 301 269 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* F4I5X3_ARATH) Solyc05g005010.3 183 398 494 467 713 570 548 580 448 270 463 549 313 452 342 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** F4I5H4_ARATH) AT1G10750 Solyc05g005020.4 2957 3179 2821 3274 2912 2934 3222 3122 4544 3395 2852 2670 3476 3372 3895 Alpha-Glucan Water Dikinase AT1G10760 Solyc05g005030.4 0 2 0 6 0 1 5 0 2 1 0 3 0 5 0 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 -** AT1G23350.1) Solyc05g005040.4 0 3 5 5 19 26 24 24 9 4 0 5 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** Q38958_ARATH) AT3G26610 Solyc05g005050.3 23 16 11 12 9 11 6 11 14 12 16 20 11 14 6 Cysteine-rich receptor-like protein kinase 3 (AHRD V3.3 *** A0A2G2VMV7_CAPBA) Solyc05g005060.3 73 69 86 79 40 58 35 49 63 78 47 67 76 69 25 Cysteine-rich receptor-like protein kinase 3 (AHRD V3.3 *** A0A2G2YEZ6_CAPAN) Solyc05g005070.2 232 169 319 153 121 143 154 111 213 294 240 208 207 235 249 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *** A0A1U8EWZ9_CAPAN) AT1G70520 Solyc05g005080.3 2940 5191 6064 7743 7584 7344 8182 6435 7225 7345 9587 5190 4677 3657 10158 Endoglucanase (AHRD V3.3 *** A0A2G2V2B4_CAPBA) AT5G49720 Solyc05g005090.4 162 297 352 284 847 835 649 723 256 397 605 433 404 343 419 LEU76408 knotted 3 Solyc05g005100.4 344 553 560 560 641 667 685 635 516 467 640 489 612 599 686 Protein trichome birefringence (AHRD V3.3 *** A0A2G3BHS7_CAPCH) AT1G60790 Solyc05g005110.1 189 116 130 147 191 124 159 120 95 116 120 124 90 152 177 F-box domain (AHRD V3.3 *** A0A200RDT5_9MAGN) AT3G23880 Solyc05g005120.4 39 10 32 15 4 11 8 6 21 15 47 3 17 30 34 Unknown protein Solyc05g005130.3 226 138 153 149 33 41 51 54 183 132 79 107 100 104 209 Prf (AHRD V3.3 *-* Q9LLD0_SOLLC) Solyc05g005140.4 409 621 423 492 1087 1048 1142 1080 668 515 429 566 425 359 404 Protein NSP-INTERACTING KINASE 3 (AHRD V3.3 *-* A0A2G3B8R8_CAPCH) Solyc05g005150.1 361 622 279 191 1628 1319 1336 1293 307 831 476 455 353 220 346 F-box/Kelch repeat-containing F-box family protein (AHRD V3.3 *** C4PVT9_ARATH) AT1G23390 Solyc05g005160.3 257 1455 673 1039 1657 1642 1578 2026 1905 1708 844 2199 1141 1203 538 ATP-citrate synthase (AHRD V3.3 *** B6TD54_MAIZE) AT1G60810 Solyc05g005170.4 93 1241 472 817 3084 2719 2105 3308 692 692 546 988 710 1090 688 Pectin lyase-like superfamily protein (AHRD V3.3 *** O22699_ARATH) AT1G60590 Solyc05g005180.3 361 621 592 472 638 795 815 626 701 510 613 470 471 518 572 1,4-dihydroxy-2-naphthoyl-CoA synthase (AHRD V3.3 *** A0A2G2XZJ4_CAPAN) AT1G60550 Solyc05g005190.3 1474 3244 2964 2674 3054 3122 3136 2911 2698 2325 2623 2888 3546 3474 3281 ADP-ribosylation factor (AHRD V3.3 *** A0A2U1LV56_ARTAN) AT1G10630 Solyc05g005200.3 392 204 342 232 93 98 95 72 237 323 446 106 315 271 334 Pyrrolidone-carboxylate peptidase-like protein (AHRD V3.3 *** A0A2K3PIQ3_TRIPR) AT1G23440 Solyc05g005210.3 269 356 466 350 428 485 506 392 393 311 388 408 343 366 310 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** A0A2U1LW40_ARTAN) AT1G10650 Solyc05g005220.1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g005230.3 0 3 18 1 4 4 12 4 4 2 1 11 2 0 19 Plant protein 1589 of Uncharacterized protein function (AHRD V3.3 *** A0A061EE06_THECC) AT1G10657 Solyc05g005240.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 YABBY gene AT1G23420 Solyc05g005250.3 544 479 578 484 546 624 522 569 700 732 574 657 774 647 544 pantothenate kinase family protein AB211526 AT1G60440 Solyc05g005260.3 1787 1002 1857 749 528 529 463 448 764 740 2786 923 1006 901 1496 DNA ligase 1-like (AHRD V3.3 *** A0A1U7VHC8_NICSY) AT1G23710 Solyc05g005265.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc05g005280.4 306 254 75 243 61 59 65 75 383 151 55 218 203 191 131 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A2G2WJW6_CAPBA) AT1G23550 Solyc05g005290.4 734 107 251 163 47 52 43 20 94 117 34 35 249 119 97 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A2G2WJW6_CAPBA) AT1G23550 Solyc05g005300.2 106 87 16 77 129 115 79 103 47 39 21 95 188 71 59 bHLH transcription factor 084 AT1G10610 Solyc05g005310.3 184 152 254 212 163 206 145 141 136 108 150 122 236 198 215 NEDD8-specific protease 1 (AHRD V3.3 *** A0A2G2WXL4_CAPBA) AT5G60190 Solyc05g005320.1 1024 2112 1677 2366 2530 1861 1762 2331 2522 2087 1232 1980 2609 2933 1570 Unknown protein AT1G23530 Solyc05g005330.3 538 340 357 269 168 240 237 229 324 343 232 377 290 382 377 Disease resistance protein (AHRD V3.3 *** A0A2U1Q201_ARTAN) Solyc05g005340.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g005350.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B-9 (AHRD V3.3 *** A0A1U8F2B7_CAPAN) Solyc05g005360.3 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 Nuclear transcription factor Y subunit B-9 (AHRD V3.3 *** A0A1U8F2B7_CAPAN) Solyc05g005370.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B (AHRD V3.3 *-* A0A2G2X323_CAPBA) Solyc05g005380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear factor Y, subunit B6 (AHRD V3.3 *** A0A2U1NB03_ARTAN) Solyc05g150100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein root UVB sensitive 4 (AHRD V3.3 *-* A0A2G2VY46_CAPBA) Solyc05g005390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear factor Y, subunit B6 (AHRD V3.3 *** A0A2U1NB03_ARTAN) AT5G47670 Solyc05g005400.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *-* S8CP16_9LAMI) Solyc05g150101.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein root UVB sensitive 4 (AHRD V3.3 *-* A0A2G2VY46_CAPBA) Solyc05g005410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *-* S8CP16_9LAMI) Solyc05g005420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *-* S8CP16_9LAMI) Solyc05g005430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *** S8CP16_9LAMI) Solyc05g005440.3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear factor Y, subunit B6 (AHRD V3.3 *** A0A2U1NB03_ARTAN) Solyc05g005450.2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Suppressor of Gene Silencing 3 (AHRD V3.3 *-* A0A0K2SUN9_SOLTU) Solyc05g005460.3 1297 530 817 269 55 65 92 41 564 722 344 265 2460 597 234 DC1 domain-containing protein (AHRD V3.3 *** A0A2U1QM98_ARTAN) AT1G60420 Solyc05g005470.4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 DC1 domain-containing protein (AHRD V3.3 *** A0A2U1QM98_ARTAN) Solyc05g005480.2 1138 1661 417 778 2106 1438 1596 1920 988 1417 313 760 1089 347 398 Quinone oxidoreductase-like protein (AHRD V3.3 *** Q8LEB8_ARATH) AT1G23740 Solyc05g005490.4 686 303 195 255 8 15 19 13 158 261 123 32 288 193 237 carbonic anhydrase Solyc05g005500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g005510.3 1095 882 752 848 700 794 853 683 839 758 852 714 999 774 863 Nucleic acid-binding, OB-fold protein (AHRD V3.3 *** A0A2U1Q2I1_ARTAN) AT1G23750 Solyc05g005520.1 49 45 26 29 2 8 10 14 13 25 23 21 23 5 20 Protein phosphatase inhibitor 2-like (AHRD V3.3 *** A0A2K3NNM1_TRIPR) Solyc05g005530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetraspanin family protein (AHRD V3.3 -** A0A2U1MFE6_ARTAN) Solyc05g005540.4 7 202 139 96 262 185 201 275 205 47 30 70 28 99 51 Polygalacturonase-1 non-catalytic subunit beta (AHRD V3.3 *** GP1_SOLLC) AT1G70370 Solyc05g005550.4 0 0 9 8 1 2 1 3 0 2 0 0 0 0 1 BURP domain (AHRD V3.3 *-* A0A200QH65_9MAGN) Solyc05g005560.4 575 3084 2437 1952 5176 3878 3330 6077 3102 2327 1989 3550 2260 1992 1238 polygalacturonase isoenzyme 1 beta subunit AT1G70370 Solyc05g005570.3 209 105 71 73 24 43 26 27 108 69 185 68 129 82 139 BURP domain (AHRD V3.3 *** A0A200QH65_9MAGN) AT1G70370 Solyc05g005580.3 36 369 365 554 1059 991 905 1123 505 260 377 547 122 265 293 DUF936 domain-containing protein (AHRD V3.3 *** A0A1Q3CQ68_CEPFO) AT1G23790 Solyc05g005590.4 642 468 531 451 472 437 400 490 428 547 376 465 383 482 574 Dual-specificity RNA methyltransferase RlmN (AHRD V3.3 *** A0A1J3CX71_NOCCA) Solyc05g005600.1 50 48 39 41 72 37 45 58 41 50 22 50 43 50 24 HD domain-containing metal-dependent phosphohydrolase family protein (AHRD V3.3 *-* A0A2U1QM05_ARTAN) Solyc05g005610.4 38 34 61 80 66 72 68 82 67 26 47 55 44 78 78 HD domain-containing metal-dependent phosphohydrolase family protein (AHRD V3.3 *-* A0A2U1PYT8_ARTAN) Solyc05g005620.4 10874 7345 8734 6866 6839 8169 9445 6501 7692 6305 11124 7024 5625 8233 13776 RNA-binding protein 25-like (AHRD V3.3 *** A0A2K3LLK7_TRIPR) Solyc05g005630.4 723 550 739 671 454 630 672 424 475 496 610 552 563 618 696 Ubiquitin-like-specific protease 1D (AHRD V3.3 *** A0A2G2WSE4_CAPBA) AT4G00690 Solyc05g005640.4 1144 918 844 895 703 1027 1043 815 909 990 869 853 799 1104 976 methyl-CpG-binding domain-containing protein 9-like (AHRD V3.3 *** A0A2I4FAS2_9ROSI) AT3G01460 Solyc05g005650.3 40 31 16 22 31 24 47 41 43 49 12 34 8 32 32 methyl-CpG-binding domain-containing protein 9 isoform X1 (AHRD V3.3 *-* XP_004239350.1) Solyc05g005660.1 1 0 0 0 0 0 0 0 0 0 3 0 0 0 0 Concanavalin A-like lectin/glucanase domain-containing protein (AHRD V3.3 *** A0A2U1NGC4_ARTAN) Solyc05g005670.1 22 13 38 28 12 11 9 12 13 33 45 14 12 27 60 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3B710_CAPCH) AT1G60190 Solyc05g005680.3 21 26 89 36 56 38 37 30 67 40 138 31 22 24 2 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4BW96_SOLLC) AT1G10550 Solyc05g005685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g005690.1 916 2218 1912 1286 1910 1892 1769 1770 1327 1032 1361 1668 2644 2148 1613 40S ribosomal protein S16 (AHRD V3.3 *** A0A2G3B8L7_CAPCH) AT2G09990 Solyc05g005700.4 184 246 274 203 289 234 274 341 242 344 277 256 197 199 257 Aldehyde dehydrogenase (AHRD V3.3 *** Q43274_MAIZE) Solyc05g005710.4 8099 14068 14899 12236 14696 14697 14447 14451 23981 22164 20678 29748 16666 18396 12030 spermidine synthase,Pfam:PF01564 Solyc05g005720.4 5 11 6 4 0 4 9 0 5 5 3 1 1 17 24 Potassium transporter (AHRD V3.3 *** A0A2G2VMI2_CAPBA) Solyc05g005730.4 2378 2082 1771 1285 1395 1327 1177 1160 1355 1199 1477 1264 1999 1877 1718 Rrp15p protein (AHRD V3.3 *** AT5G48240.1) AT5G48240 Solyc05g005740.3 271 243 457 355 239 304 250 271 297 252 403 258 301 273 315 Potassium transporter (AHRD V3.3 *** A0A2G2VML6_CAPBA) AT1G70300 Solyc05g005750.3 1601 710 1277 766 571 632 583 555 663 1154 1330 690 713 894 843 Trehalose-6-phosphate synthase (AHRD V3.3 *** E5GC29_CUCME) AT1G23870 Solyc05g005760.4 830 2892 2845 2946 4326 3972 3893 3966 3247 2655 3245 2911 2835 2571 2824 NHL domain-containing protein (AHRD V3.3 *** A0A2K3PAQ7_TRIPR) AT1G70280 Solyc05g005770.3 1422 934 1003 1131 814 954 954 1009 1040 1258 1130 1014 871 820 789 NHL domain-containing protein (AHRD V3.3 *** F4I7N5_ARATH) AT1G23890 Solyc05g005780.3 2482 2143 1930 2034 1784 1951 2035 1645 1740 1875 1838 1739 1925 2130 2199 AP-1 complex subunit gamma (AHRD V3.3 *** A0A2G2VMC8_CAPBA) AT1G60070 Solyc05g005790.4 111 110 214 149 165 152 135 121 137 120 195 86 176 148 107 RING-H2 finger protein ATL47-like (AHRD V3.3 *** A0A2I4FLG8_9ROSI) Solyc05g005800.4 1185 1783 1466 1246 1445 1345 1493 1747 1402 1257 1136 1292 1809 1856 1567 Threonine--tRNA ligase, cytoplasmic (AHRD V3.3 *** A0A2G2VMD7_CAPBA) AT5G26830 Solyc05g005810.4 296 746 811 434 853 986 1067 730 698 293 825 431 287 370 253 Serine/threonine-protein kinase WNK (With No Lysine)-like protein (AHRD V3.3 *** Q9ZUI7_ARATH) AT1G60060 Solyc05g005820.4 0 1 0 0 7 1 3 4 1 0 0 0 0 2 0 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A1U8EZH9_CAPAN) Solyc05g005830.3 5 4 0 0 1 2 2 5 6 3 1 0 0 0 3 WAT1-related protein (AHRD V3.3 *** K4BWB0_SOLLC) Solyc05g005840.4 0 0 0 4 0 1 1 0 0 0 1 0 0 1 4 WAT1-related protein (AHRD V3.3 *** K4BWB1_SOLLC) Solyc05g005850.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WAT1-related protein (AHRD V3.3 *** K4BWB2_SOLLC) Solyc05g005860.3 301 255 137 262 317 228 251 281 276 355 122 335 255 253 150 WAT1-related protein (AHRD V3.3 *** K4BWB3_SOLLC) Solyc05g005870.3 117 52 6 177 0 0 0 1 49 38 1 0 90 6 0 WAT1-related protein (AHRD V3.3 *** K4BWB4_SOLLC) AT1G70260 Solyc05g005865.1 24 58 138 146 48 77 75 48 128 196 207 163 25 55 57 MLP-like protein (AHRD V3.3 *** A0A1U8EPD5_CAPAN) AT1G24020 Solyc05g005880.2 372 757 709 1173 1426 971 1474 1331 908 904 997 1076 882 1004 402 30S ribosomal protein S13, putative, expressed (AHRD V3.3 *** Q75IA5_ORYSJ) AT5G14320 Solyc05g005890.2 202 147 160 171 186 200 202 147 175 126 168 145 162 153 167 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** A0A2U1NXN3_ARTAN) AT1G24040 Solyc05g005910.4 1 3 9 4 0 2 3 0 36 14 46 52 2 15 5 Protein NRT1/ PTR FAMILY 1.2 (AHRD V3.3 *-* A0A1J3FWJ0_NOCCA) Solyc05g005920.4 274 405 211 470 262 341 240 280 673 520 302 545 443 431 469 protein NRT1/ PTR FAMILY 1.2-like (AHRD V3.3 *** A0A2I4HMB7_9ROSI) Solyc05g005930.3 467 637 531 659 473 379 310 533 942 823 717 1215 353 520 379 Glycosyltransferase (AHRD V3.3 *** A0A2I4G8J4_9ROSI) Solyc05g005940.3 64 230 206 270 152 168 221 182 316 321 325 336 300 302 277 Protein NRT1/ PTR FAMILY 1.2 (AHRD V3.3 *** A0A1J3DU78_NOCCA) Solyc05g005950.3 1198 2286 1474 1555 2000 1911 1850 1591 4054 3409 2997 3992 2079 2003 2294 Protein NRT1/ PTR FAMILY 1.2 (AHRD V3.3 *** A0A1J3DU78_NOCCA) Solyc05g005960.3 417 602 322 461 508 470 479 504 1407 1154 1021 1314 643 565 633 Protein NRT1/ PTR FAMILY 1.2 (AHRD V3.3 *** A0A1J3DU78_NOCCA) Solyc05g005970.3 12 34 38 28 59 73 56 46 100 59 177 100 21 42 28 Protein NRT1/ PTR FAMILY 1.2 (AHRD V3.3 *** A0A1J3DU78_NOCCA) Solyc05g005980.4 256 1063 583 808 890 905 753 882 1565 1375 1129 2232 801 1113 536 protein NRT1/ PTR FAMILY 1.2-like (AHRD V3.3 *** A0A2I4HMB7_9ROSI) Solyc05g005990.3 667 713 499 802 552 516 423 585 911 1000 996 1173 621 714 597 Protein NRT1/ PTR FAMILY 1.1 (AHRD V3.3 *-* PTR32_ARATH) Solyc05g006000.3 142 244 405 346 319 375 317 266 267 235 356 247 357 320 394 protein NRT1/ PTR FAMILY 1.2-like (AHRD V3.3 *** A0A2I4HMB7_9ROSI) Solyc05g006010.4 80 107 133 106 333 278 280 289 119 149 195 212 263 108 138 Protein NRT1/ PTR FAMILY 1.2 (AHRD V3.3 *-* A0A1J3FWJ0_NOCCA) Solyc05g006020.3 570 1341 1447 1156 2880 2573 2543 2514 905 1073 1013 1466 1501 1008 740 Nucleobase-ascorbate transporter 8 (AHRD V3.3 *** A0A1U8EN63_CAPAN) AT1G60030 Solyc05g006030.3 65 94 86 62 152 134 138 70 133 105 207 77 14 54 225 D-ribose-binding periplasmic (AHRD V3.3 *** A0A0B0Q0N1_GOSAR) AT1G60010 Solyc05g006040.4 11 15 10 17 42 15 39 46 14 22 41 9 0 12 17 Serine/Threonine-kinase (AHRD V3.3 *-* AT1G10522.2) Solyc05g006050.3 2427 2952 2880 3381 4342 4662 4919 3998 2849 2084 3199 2625 1911 1972 2591 cyclinD1_1 AT1G70210 Solyc05g006060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006070.4 210 399 308 288 449 425 409 399 385 259 230 382 351 369 277 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* Q84JK1_ARATH) AT1G70200 Solyc05g006080.1 3396 5849 5702 6683 5699 5052 3941 6823 3460 6341 5009 6807 7569 6847 4642 Oligosaccharyltransferase complex subunit OSTC-like (AHRD V3.3 *** A0A2K3PHN5_TRIPR) AT4G29870 Solyc05g006090.4 518 728 683 726 875 902 844 926 768 520 636 696 604 634 590 Ribonuclease H domain (AHRD V3.3 *** A0A200QLE9_9MAGN) Solyc05g006100.4 67 73 69 69 102 86 153 98 72 79 59 85 66 65 64 Thiol-disulfide oxidoreductase DCC family protein (AHRD V3.3 *-* A0A2N9Z422_PAEPO) Solyc05g006110.3 321 513 409 373 229 360 327 195 302 227 423 359 433 464 369 Serine/Threonine-kinase (AHRD V3.3 *** AT1G10522.2) AT1G10522 Solyc05g006120.3 506 336 384 292 222 261 214 277 233 269 243 355 149 263 215 DNA polymerase lambda-like protein (AHRD V3.3 *** A0A2K3P2F9_TRIPR) AT1G10520 Solyc05g006130.4 428 320 332 295 243 223 276 218 272 249 217 335 339 442 291 RNA helicase DEAD17 AT1G59990 Solyc05g006140.1 0 1 0 1 0 0 1 0 0 0 0 1 2 3 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4EYB7_9ROSI) Solyc05g006150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Glycosyltransferase (AHRD V3.3 *-* A0A328E984_9ASTE) Solyc05g006160.4 294 279 301 367 244 367 318 245 237 168 370 281 366 483 254 Gibberellin regulated protein (AHRD V3.3 *** A0A200QLE0_9MAGN) Solyc05g006170.4 788 1006 992 738 912 929 1025 783 841 620 769 781 937 1057 1211 Lycopersicon esculentum Chloroplast Envelope Protein 1 AT1G10510 Solyc05g006180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone acetyltransferase of the CBP family 12 (AHRD V3.3 *** F4I4I8_ARATH) Solyc05g006190.2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006200.4 671 669 498 497 467 464 441 537 515 510 310 524 637 582 392 tRNA (guanine(37)-N1)-methyltransferase (AHRD V3.3 *** A0A2G2YE57_CAPAN) AT3G56120 Solyc05g006210.3 15 3 3 18 15 11 13 15 5 4 0 4 17 19 22 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A2G3B8G3_CAPCH) AT3G24330 Solyc05g006215.1 209 386 323 405 457 403 412 410 356 285 320 364 503 385 377 Nucleic acid-binding, OB-fold protein (AHRD V3.3 *** A0A2U1Q2I1_ARTAN) Solyc05g006220.3 55 171 67 89 76 60 51 86 114 116 58 40 52 29 62 IAA-amino acid hydrolase ILR1-like 1 (AHRD V3.3 *** A0A2G3B8H5_CAPCH) Solyc05g006230.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4BWF0_SOLLC) AT1G24110 Solyc05g006240.4 2268 1319 1521 1688 1367 1605 1696 1344 1367 1550 1623 1372 1500 1615 1769 Chaperone protein dnaJ 16 (AHRD V3.3 *** A0A1U8EVK4_CAPAN) AT1G24120 Solyc05g006250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 lysine-specific histone demethylase 1 homolog 1 (AHRD V3.3 *-* A0A2I4HTG5_9ROSI) Solyc05g006255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006285.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006290.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *** A0A2U1LZM8_ARTAN) Solyc05g006300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006310.3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 Zinc finger protein 5 (AHRD V3.3 *** A0A2G3B8H9_CAPCH) AT1G10480 Solyc05g006320.4 1989 1661 1759 1680 1716 1642 1866 1611 1724 1728 1623 1741 1651 1827 1877 Sterile alpha motif domain-containing protein (AHRD V3.3 *** A0A2U1NUF5_ARTAN) AT1G70180 Solyc05g006325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) ATMG00240 Solyc05g006330.2 37 60 91 75 47 39 48 21 29 29 114 24 44 96 210 Unknown protein Solyc05g006340.3 358 261 255 406 37 38 27 36 185 267 299 176 205 324 439 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1QGB4_ARTAN) AT1G24130 Solyc05g150102.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 AT-rich interactive domain-containing protein 5 (AHRD V3.3 --* XP_004238465.1) Solyc05g150103.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006360.2 5 1 0 1 0 0 0 0 0 0 0 0 5 7 0 Metalloendoproteinase 1 (AHRD V3.3 *** A0A1J3CBL8_NOCCA) Solyc05g006370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *-* A0A2U1PDH8_ARTAN) Solyc05g006390.1 244 124 119 47 10 21 10 8 11 27 235 48 89 69 139 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase (AHRD V3.3 *** Q8VYY6_ARATH) Solyc05g006400.2 3187 2484 2253 2610 1856 1988 1872 1940 2185 2897 2103 2415 2248 2300 2164 inositol-1%2C4%2C5-trisphosphate 5-phosphatase (AHRD V3.3 *** AT5G54870.1) AT1G70160 Solyc05g006410.3 292 135 211 156 147 176 184 136 132 201 124 171 118 140 171 zinc finger MYND domain-containing protein 15 (AHRD V3.3 *** A0A2I4DZS7_9ROSI) AT1G70150 Solyc05g006420.3 1271 1685 1659 2210 1543 1136 1323 1150 1879 1766 956 1014 4473 3359 2554 Two-component response regulator ARR3 (AHRD V3.3 *** A0A2G2VM98_CAPBA) AT1G10470 Solyc05g006430.3 9 19 8 18 20 12 6 19 16 15 22 14 9 12 16 Formin-like protein (AHRD V3.3 *** A0A2G2VM92_CAPBA) AT1G70140 Solyc05g006440.4 191 243 192 256 265 259 279 181 294 270 270 250 186 263 316 transmembrane protein (AHRD V3.3 *** AT3G17930.1) AT3G17930 Solyc05g006450.3 97 121 129 166 153 172 198 216 99 116 83 165 104 160 76 Carboxypeptidase (AHRD V3.3 *** A0A1U8EY18_CAPAN) AT1G15000 Solyc05g006460.3 22 21 25 16 19 18 15 25 41 7 9 12 18 31 11 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2VM90_CAPBA) AT1G62260 Solyc05g006465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006470.4 298 328 311 304 349 340 376 361 348 288 322 334 342 313 313 Actin-related protein 2/3 complex subunit (AHRD V3.3 *** A0A2I4F971_9ROSI) AT2G30910 Solyc05g006475.1 503 672 444 473 601 547 501 514 566 453 511 482 760 598 426 Transposase, MuDR, MULE transposase domain protein (AHRD V3.3 *-* A0A2U1NVT8_ARTAN) Solyc05g006490.4 4048 2220 2210 1458 1740 1623 1351 1693 2012 2353 2095 2085 1557 2146 1973 TPX2 domain-containing protein (AHRD V3.3 *-* A0A1Q3CMC0_CEPFO) Solyc05g006500.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 Germin-like protein 3-1 (AHRD V3.3 *** A0A2G3B8B8_CAPCH) AT1G10460 Solyc05g006510.2 97 238 470 205 403 404 398 365 204 154 446 238 192 228 118 Hexosyltransferase (AHRD V3.3 *** A0A1U8EZ74_CAPAN) AT1G70090 Solyc05g006520.4 1435 1883 1747 1727 1705 1773 1686 1653 1837 1857 1783 1653 1889 1761 1559 dehydrogenase AF209924 AT1G59900 Solyc05g006530.4 375 405 444 434 274 324 372 249 320 188 244 199 275 449 432 DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic (AHRD V3.3 *** A0A2G2VM82_CAPBA) AT1G70070 Solyc05g006540.3 1494 1517 1487 1799 1355 1559 1744 1456 1707 1208 1451 1176 1482 1676 1863 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *** A0A2G2YE30_CAPAN) AT1G24190 Solyc05g006550.4 1887 691 755 701 769 809 804 730 848 1532 707 980 747 846 727 Microtubule-associated protein TORTIFOLIA1 (AHRD V3.3 *-* A0A1J3JY05_NOCCA) Solyc05g006560.1 365 225 406 280 240 270 266 190 199 188 353 215 247 280 253 UPF0392 protein (AHRD V3.3 *** A0A2G3B8B4_CAPCH) AT1G27200 Solyc05g006570.1 57 190 306 248 402 432 441 591 245 201 210 403 150 227 98 Inactive receptor kinase (AHRD V3.3 *** A0A2R6RF71_ACTCH) AT1G27190 Solyc05g006580.3 152 156 149 125 96 133 113 159 149 138 149 162 159 165 103 structural polyprotein (AHRD V3.3 *** AT1G69980.1) AT1G69980 Solyc05g006590.3 432 821 889 658 840 918 839 965 805 559 586 671 787 687 688 protein phosphatase 2A catalytic subunit 1 AT1G10430 Solyc05g006600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006610.4 27 59 84 64 149 125 113 112 67 63 90 85 91 81 71 CLAVATA3/ESR (CLE)-related protein 25-like (AHRD V3.3 *-* A0A2I4EI69_9ROSI) Solyc05g006620.3 489 402 503 507 419 538 501 384 568 523 470 387 448 530 559 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A1P8AUD3_ARATH) AT1G27170 Solyc05g006630.4 1470 887 922 966 675 869 926 712 831 775 861 707 793 996 1346 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A1P8AUG7_ARATH) Solyc05g006640.4 693 416 524 531 340 384 362 332 521 536 608 380 520 530 561 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A1U8EVI0_CAPAN) AT1G59820 Solyc05g006650.3 357 550 1195 1094 1012 1187 1112 832 917 691 1525 670 656 627 1274 bHLH transcription factor 036 AT5G62610 Solyc05g006660.4 912 805 1147 1034 1075 1389 1477 899 1062 1520 2092 976 1309 787 912 Protein ENHANCED DISEASE RESISTANCE 2 (AHRD V3.3 *** A0A1J3E5Z2_NOCCA) Solyc05g006670.2 0 12 8 18 13 11 7 4 11 3 16 15 7 15 12 Leucine-rich repeat receptor protein kinase family protein (AHRD V3.3 *-* A0A061E5L2_THECC) Solyc05g006680.4 414 457 321 473 665 695 626 714 531 428 362 495 362 363 466 Galactosyltransferase family protein (AHRD V3.3 *** A0A2U1KC25_ARTAN) Solyc05g006690.3 62 76 100 135 152 156 195 100 59 55 77 79 36 85 88 Transmembrane protein, putative (DUF247) (AHRD V3.3 *** Q9SN06_ARATH) Solyc05g006700.4 88 86 92 178 188 119 124 84 83 120 83 50 60 85 58 Wall-associated receptor kinase-like protein (AHRD V3.3 *** A0A2K3NTT9_TRIPR) AT1G10380 Solyc05g006710.3 739 485 493 480 376 417 428 259 359 355 583 347 436 477 546 Unknown protein Solyc05g006720.1 48 26 45 55 35 13 32 23 95 67 31 90 72 46 51 HIPL2 protein (AHRD V3.3 *-* A0A2G3B8G4_CAPCH) Solyc05g006730.4 11 36 38 53 12 34 16 14 86 36 52 56 12 15 9 Glutathione S-transferase (AHRD V3.3 *** A0A200QY01_9MAGN) AT1G10370 Solyc05g006740.4 225 160 141 311 296 305 243 233 178 247 181 92 181 64 525 Glutathione S-transferase (AHRD V3.3 *** A0A200QY01_9MAGN) AT1G10370 Solyc05g006750.3 0 0 0 6 1 1 0 9 0 0 1 0 2 0 2 Glutathione S-transferase (AHRD V3.3 *** A0A200QY01_9MAGN) Solyc05g006760.4 1614 644 793 870 720 731 808 731 720 841 920 855 500 804 816 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1KMN1_ARTAN) AT1G27150 Solyc05g006770.4 273 401 261 478 707 644 623 887 529 628 286 741 321 319 281 Protein kinase domain (AHRD V3.3 *-* A0A200QNK8_9MAGN) Solyc05g006780.3 269 230 327 202 132 126 110 152 199 311 275 201 290 223 232 Actin cross-linking (AHRD V3.3 *** A0A2U1N9L8_ARTAN) AT1G27100 Solyc05g006790.2 4 6 0 3 0 0 0 0 0 0 0 0 0 4 0 Actin cross-linking protein (AHRD V3.3 *** Q0WQH3_ARATH) AT1G27100 Solyc05g006800.2 52 73 108 104 109 120 126 126 114 70 96 119 115 89 65 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3B891_CAPCH) AT1G59720 Solyc05g006810.4 155 217 195 213 143 135 127 126 171 100 226 123 240 229 248 2,4-dichlorophenol 6-monooxygenase (AHRD V3.3 *** A0A1J3FFU9_NOCCA) AT1G24340 Solyc05g006813.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 295 (AHRD V3.3 -** XP_015571993.1) Solyc05g006817.1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 Unknown protein Solyc05g006820.4 97 208 232 285 253 293 255 237 360 225 244 281 220 194 187 DnaJ protein like (AHRD V3.3 *** A0A2I0WJV4_9ASPA) Solyc05g006830.3 68 374 1059 824 177 153 117 83 254 298 784 96 446 397 1798 Thioredoxin (AHRD V3.3 *** A0A2G2VM05_CAPBA) Solyc05g150104.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Thioredoxin (AHRD V3.3 *** A0A2G2YE12_CAPAN) Solyc05g150105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g006850.4 23 92 189 134 580 403 421 158 121 14 32 22 289 176 572 Thioredoxin (AHRD V3.3 *** A0A1U8EXB1_CAPAN) Solyc05g006855.1 1 3 13 2 3 4 6 2 4 0 1 0 33 18 3 Thioredoxin (AHRD V3.3 *** A0A2G2VLZ1_CAPBA) Solyc05g006870.3 334 679 921 1023 436 342 378 185 314 610 858 262 847 578 640 Thioredoxin (AHRD V3.3 *** A0A2G2VLZ1_CAPBA) Solyc05g006880.1 1658 973 681 571 486 585 627 435 482 540 691 603 1026 749 846 Unknown protein Solyc05g006890.1 39 20 3 5 7 13 14 9 11 11 25 13 31 23 9 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A1U8HES8_CAPAN) AT1G13950 Solyc05g006900.2 1769 1197 668 687 567 521 482 638 632 997 497 795 924 698 585 glycine-rich protein (AHRD V3.3 *-* AT1G27090.1) Solyc05g006910.4 691 666 507 694 509 461 515 519 539 469 392 497 906 963 921 AMP deaminase (AHRD V3.3 *** A0A2G2VM22_CAPBA) Solyc05g006920.4 746 428 302 341 221 222 199 170 255 425 334 152 244 218 385 Protein NRT1/ PTR FAMILY 2.13 (AHRD V3.3 *** A0A1U8EVJ4_CAPAN) Solyc05g006930.3 216 270 279 309 298 280 364 275 312 216 279 306 214 291 279 5'-AMP-activated protein kinase subunit beta-2 (AHRD V3.3 *** A0A1J3EBW5_NOCCA) AT1G27070 Solyc05g006940.3 408 294 334 321 340 395 375 276 339 275 298 286 291 372 405 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A2U1PVX2_ARTAN) AT1G27060 Solyc05g006950.4 1768 2219 1731 2262 2389 2488 2584 2659 2307 1979 1763 1994 1833 1833 2072 conserved oligomeric Golgi complex subunit 7 (AHRD V3.3 *** A0A2I4E905_9ROSI) Solyc05g006960.3 799 868 886 814 708 655 749 845 669 744 761 817 918 839 637 homeobox leucine zipper protein (AHRD V3.3 *** AT1G27050.1) AT1G27050 Solyc05g006965.1 111 131 125 139 154 170 140 130 145 137 152 152 136 166 192 Small multi-drug export protein (AHRD V3.3 *-* B6T1F5_MAIZE) AT2G02590 Solyc05g006980.3 2374 845 850 996 611 557 373 412 741 1697 1035 960 478 825 1387 Homeobox-leucine zipper protein HOX16 (AHRD V3.3 *** A0A1U8EXU3_CAPAN) Solyc05g006990.3 220 399 403 493 340 282 276 92 349 447 350 113 922 468 780 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AT47_ARATH) AT1G69850 Solyc05g007000.4 2 48 31 41 43 23 29 31 51 57 9 37 75 22 11 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AT47_ARATH) Solyc05g007010.3 41 245 250 213 253 271 200 216 278 223 263 270 223 196 50 Glyoxal oxidase (AHRD V3.3 *** A0A200PQ20_9MAGN) Solyc05g007020.4 1327 400 557 529 268 438 495 271 489 484 570 482 354 620 910 LOV/LOV protein (AHRD V3.3 *** E3WH16_SOLLC) AT2G02710 Solyc05g007030.4 2176 1706 1830 2126 1654 1744 1796 1891 1506 1937 1421 1759 1559 1887 2060 heat-inducible transcription repressor (AHRD V3.3 *** AT3G17900.2) AT3G17900 Solyc05g007040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g007050.4 1657 1326 1926 1661 1759 1855 1997 1496 1269 1322 2073 1297 1605 1663 1615 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1NYF7_ARTAN) AT5G15080 Solyc05g007060.4 583 436 328 362 223 260 283 265 403 433 303 370 234 404 324 Plant/T7N9-9 protein (AHRD V3.3 *** G7K9S9_MEDTR) AT1G07040 Solyc05g007070.2 873 532 606 671 492 528 576 533 744 693 625 562 518 674 878 Alpha-amylase (AHRD V3.3 *** A0A2G2YEB6_CAPAN) AT1G69830 Solyc05g007080.4 1 0 26 0 0 0 1 5 0 0 0 0 0 0 0 Pectate lyase (AHRD V3.3 *** A0A2G2YDT9_CAPAN) Solyc05g007090.4 128 197 255 194 222 273 241 173 273 164 282 196 201 229 331 Zinc knuckle (CCHC-type) family protein (AHRD V3.3 *** A0A1P8BB42_ARATH) AT5G20220 Solyc05g007100.3 348 627 498 484 679 584 618 679 400 383 468 586 659 598 437 Single-stranded DNA-binding protein WHY1, chloroplastic (AHRD V3.3 *** WHY1_SOLTU) AT1G14410 Solyc05g007110.2 0 5 0 0 0 0 0 0 0 0 0 1 0 5 0 WRKY transcription factor 76 Solyc05g007120.4 1364 1171 1413 1471 1313 1179 1320 1273 1729 1393 1741 1021 1521 1269 1948 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A2U1LJE3_ARTAN) AT1G14390 Solyc05g007130.4 1942 2006 2045 1389 2040 2022 2040 2287 1960 1720 1619 2257 1710 1796 2007 SUN-like protein 15 Solyc05g007140.3 2919 1599 2268 1474 851 811 794 740 1665 1946 5035 1495 2045 1915 2218 Protein kinase 2B, chloroplastic (AHRD V3.3 *** A0A2G3B7X5_CAPCH) AT2G02800 Solyc05g007150.4 188 438 370 258 456 450 481 360 295 294 504 423 792 537 487 UDP-galactose/UDP-glucose transporter 3 (AHRD V3.3 *** A0A2G2YDQ6_CAPAN) AT1G14360 Solyc05g007160.3 1062 1770 1162 1477 2633 2945 3113 2214 1165 961 1292 1160 941 1011 1167 R2R3MYB transcription factor 110 AT2G02820 Solyc05g007170.3 6 4 0 0 14 13 26 23 2 2 6 1 0 0 0 Prf (AHRD V3.3 *-* Q9LLD0_SOLLC) Solyc05g007180.3 2027 3553 3919 3517 8203 7696 8844 5499 4515 2351 5444 3749 3483 3645 2732 jasmonic acid 1 AT1G69780 Solyc05g007190.4 522 636 610 764 662 704 757 634 614 722 776 597 557 625 731 SlSUT2 AT2G02860 Solyc05g007200.4 1005 699 1086 973 798 774 829 642 964 1009 1000 948 940 947 1231 binding partner of ACD11 1 (AHRD V3.3 *** A0A1U8EM00_CAPAN) AT1G14340 Solyc05g007210.2 11 80 25 54 88 137 109 110 121 63 53 76 32 88 26 Transcription factor PRE4 (AHRD V3.3 *** A0A2G2VLX3_CAPBA) AT1G26945 Solyc05g007220.4 243 166 211 194 107 129 133 114 179 126 155 93 139 184 204 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G2X8J1_CAPBA) Solyc05g007230.4 6 14 4 11 18 44 26 40 39 16 15 35 9 16 1 Receptor-like kinase (AHRD V3.3 *-* A0A0K9NLV5_ZOSMR) Solyc05g007240.1 703 749 757 782 1253 1207 1143 893 839 676 628 880 657 657 547 zinc finger CCHC domain protein (AHRD V3.3 *** AT1G26920.1) AT1G69760 Solyc05g007245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g007250.3 1637 5108 3519 2805 4024 3691 3814 3971 2834 1846 2381 2720 5234 4770 2849 40S ribosomal protein S9 (AHRD V3.3 *** A0A1U8EPE0_CAPAN) AT5G39850 Solyc05g007260.3 479 623 507 653 818 627 663 814 914 766 852 773 861 773 679 Ribulose-phosphate 3-epimerase (AHRD V3.3 *** A0A328DMM8_9ASTE) AT3G01850 Solyc05g007270.4 918 1164 918 895 1113 964 1033 1059 1157 796 772 874 1099 954 722 Helicase with zinc finger protein (AHRD V3.3 *** B3H5Y3_ARATH) Solyc05g007280.3 60 117 306 204 227 234 226 160 235 83 125 167 216 279 263 Brevis radix-like domain-containing protein (AHRD V3.3 *-* A0A2U1MED6_ARTAN) Solyc05g007300.3 12 67 116 131 84 128 88 105 84 53 76 94 62 61 117 HVA22-like protein (AHRD V3.3 *** A0A1U8EJU9_CAPAN) AT1G69700 Solyc05g007350.3 2 2 3 0 4 1 0 2 1 2 4 0 6 2 2 Late blight resistance protein R1-A (AHRD V3.3 *** A0A2G2VV43_CAPBA) Solyc05g007390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 46 (AHRD V3.3 *-* A0A2G3AUZ3_CAPCH) Solyc05g007410.1 33 15 5 13 25 33 22 14 24 11 14 6 6 19 30 Ubiquitin carboxyl-terminal hydrolase 46 (AHRD V3.3 *-* A0A2G3AUZ3_CAPCH) Solyc05g007420.2 299 533 305 491 577 573 621 510 636 388 584 366 524 388 499 TCP transcription factor 23 Solyc05g007430.4 246 576 549 776 760 782 760 596 595 465 576 588 623 715 528 Transmembrane protein (DUF616) (AHRD V3.3 *-* Q9SST1_ARATH) AT2G02910 Solyc05g007440.3 1126 955 843 917 634 703 781 701 802 769 820 811 1069 984 1245 ARM repeat superfamily protein (AHRD V3.3 *** AT1G14300.1) AT1G14300 Solyc05g007450.3 10 321 333 246 464 457 484 466 273 82 248 264 86 356 86 Origin of replication complex subunit 6 (AHRD V3.3 *** A0A2G2YDJ4_CAPAN) AT1G26840 Solyc05g007460.3 683 373 350 438 298 291 284 222 220 481 429 272 361 344 403 Sphinganine C(4)-monooxygenase 1 (AHRD V3.3 *** A0A2G3B7R8_CAPCH) AT1G69640 Solyc05g007470.4 2190 1546 420 424 226 254 202 276 699 870 551 164 3085 1126 1166 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1QF48_ARTAN) Solyc05g007480.1 333 329 64 245 420 309 276 334 376 405 103 116 272 82 127 protein PHYTOCHROME KINASE SUBSTRATE 1-like (AHRD V3.3 *** A0A2I4EE26_9ROSI) AT2G02950 Solyc05g007490.3 490 1909 2266 1803 2451 2653 2529 2554 2560 1709 1879 1819 1988 1910 1801 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1LK68_ARTAN) AT1G26850 Solyc05g007500.4 395 393 368 550 436 549 485 438 424 534 405 558 272 428 305 CAAX amino terminal protease family protein (AHRD V3.3 *** A0A2U1P5P7_ARTAN) AT1G14270 Solyc05g007510.4 9522 5359 5052 3086 3141 2968 3113 2614 4009 6724 4719 3043 8648 5160 4103 RNA-directed RNA polymerase AT1G14790 Solyc05g007520.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 46 (AHRD V3.3 *-* A0A2G3AUZ3_CAPCH) Solyc05g007540.3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 46 (AHRD V3.3 *-* A0A2G3AUZ3_CAPCH) Solyc05g007550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain (AHRD V3.3 *** A0A200QEZ5_9MAGN) AT1G26870 Solyc05g007560.3 1712 4014 3709 2821 3807 3537 3657 3774 2547 1889 2861 2744 4522 4038 2682 60S ribosomal protein L34 (AHRD V3.3 *** A0A1U8HB42_CAPAN) AT1G26880 Solyc05g007570.4 653 359 570 598 394 408 346 296 339 347 452 340 489 446 584 hypothetical protein (DUF1666) (AHRD V3.3 *-* AT5G39785.5) Solyc05g007580.1 1761 1731 1324 2218 1277 1246 938 1332 1737 3062 1131 1684 2200 1764 1090 Zinc-finger homeodomain protein 11 (AHRD V3.3 *** A0A2G2VLP7_CAPBA) Solyc05g007590.4 346 248 349 302 353 315 317 315 274 308 408 303 299 297 315 Aminotransferase, class V/Cysteine desulfurase (AHRD V3.3 *** A0A2U1L8D5_ARTAN) Solyc05g007600.1 1 0 0 0 5 4 7 5 1 0 4 1 3 1 0 Unknown protein Solyc05g007610.2 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 Resistance protein R1 (AHRD V3.3 *** Q4VFY3_SOLDE) Solyc05g007620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late blight resistance protein R1-A (AHRD V3.3 *-* A0A2G3B531_CAPCH) Solyc05g007630.3 1 3 11 0 1 2 0 1 3 4 3 2 4 2 0 Resistance protein R1 (AHRD V3.3 *** Q4VFY3_SOLDE) Solyc05g007640.3 1 0 0 1 0 1 0 0 1 0 7 0 3 0 0 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A1U8EVK9_CAPAN) Solyc05g007650.1 3 2 4 9 15 7 11 12 8 10 10 5 15 5 0 CLAVATA3/ESR (CLE)-related protein 45 (AHRD V3.3 *** A0A2I4EE35_9ROSI) Solyc05g007660.2 599 620 640 627 648 671 707 716 602 691 596 604 533 604 535 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NXA0_ARTAN) Solyc05g007670.4 1297 1199 1173 1091 986 992 1059 987 1174 1400 1321 927 1140 1191 1228 GDA1/CD39 nucleoside phosphatase family protein (AHRD V3.3 *** A0A2U1NX72_ARTAN) AT2G02970 Solyc05g007680.1 235 401 201 373 429 408 367 653 288 307 190 319 317 263 155 Arabinanase/levansucrase/invertase (AHRD V3.3 *** AT1G26761.1) AT1G26761 Solyc05g007690.2 4 34 36 32 55 65 43 44 38 20 65 83 20 52 24 Transcription factor MYB39 (AHRD V3.3 *** A0A2G2VLL7_CAPBA) Solyc05g007700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAR1 domain-containing protein (AHRD V3.3 *-* A0A1Q3CZJ9_CEPFO) Solyc05g007710.3 29 62 370 300 165 204 107 141 119 133 186 268 18 127 108 MYB transcription factor (AHRD V3.3 *-* A0A0U3IU11_MESCR) Solyc05g007720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g007730.4 188 246 300 201 267 379 293 207 161 147 198 171 238 280 294 Mitochondrial carrier protein (AHRD V3.3 *** A0A200QP40_9MAGN) AT1G14140 Solyc05g007740.3 411 349 275 172 215 205 218 222 338 230 193 267 302 316 223 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3B7P9_CAPCH) AT2G25580 Solyc05g007750.4 144 304 320 350 440 420 387 413 354 256 180 312 370 385 219 Anaphase-promoting complex subunit 2 (AHRD V3.3 *** A0A2G2VLL1_CAPBA) AT2G04660 Solyc05g007760.2 42 202 211 302 558 475 433 534 284 137 176 328 44 153 128 SET domain (AHRD V3.3 *** A0A200QP09_9MAGN) AT1G26760 Solyc05g007770.3 2477 627 77 106 8 11 8 11 76 565 74 48 117 224 89 NAC domain TF AT1G69490 Solyc05g007780.3 105 127 85 145 173 197 255 223 149 92 105 95 84 80 139 Photosynthetic NDH subcomplex L 2 (AHRD V3.3 *** A0A0F7GYP0_9ROSI) AT1G14150 Solyc05g007790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_SOLDE) Solyc05g007800.4 117 178 143 211 130 143 143 122 150 67 190 99 217 178 249 cAMP-regulated phosphoprotein 19-related protein (AHRD V3.3 *-* Q9C787_ARATH) AT1G69510 Solyc05g007810.3 2297 1772 1392 1551 1395 1405 1475 1486 1658 1576 1242 1322 1695 1636 1640 KH domain-containing protein (AHRD V3.3 *** A0A2I0VIG3_9ASPA) Solyc05g007820.4 948 799 796 851 648 849 887 768 677 791 737 776 855 870 757 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1ME13_ARTAN) AT1G14180 Solyc05g007830.3 372 2739 1891 3352 2857 3410 2465 3055 1743 1881 1183 1925 10263 7136 5126 expansin12 AT2G03090 Solyc05g007840.3 179 278 222 420 261 211 285 244 240 197 177 275 347 367 204 Transcription termination factor (AHRD V3.3 *** A0A2U1LKM6_ARTAN) AT2G03050 Solyc05g007850.2 193 178 202 225 112 156 162 92 178 142 149 123 178 231 228 bacterial spot disease resistance protein 4 Solyc05g007870.3 285 592 671 691 1615 1731 1390 1369 572 472 892 1018 609 783 368 R2R3MYB transcription factor 117 AT1G69560 Solyc05g007880.4 3646 1104 53 880 634 481 472 591 375 550 24 156 381 92 131 cyclic dof factor 2-like (AHRD V3.3 *** A0A2I4E3P6_9ROSI) Solyc05g007890.4 215 236 340 205 179 127 109 123 252 125 130 104 353 268 247 Myb family transcription factor APL (AHRD V3.3 *** A0A2G2VLB7_CAPBA) AT1G69580 Solyc05g007895.1 201 66 83 52 65 54 55 26 88 44 49 53 100 81 65 RING/U-box superfamily protein (AHRD V3.3 *-* Q9LJE9_ARATH) AT1G26800 Solyc05g007910.3 159 199 215 209 285 298 233 250 191 144 179 265 223 218 309 50S ribosomal protein L18, chloroplastic (AHRD V3.3 *** A0A1J3I4E4_NOCCA) AT1G14205 Solyc05g007920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein DMP8-like (AHRD V3.3 *-* XP_004239396.1) Solyc05g007930.3 578 931 1184 954 878 958 953 880 1054 764 937 897 1077 985 1147 Beta-1,3-galactosyltransferase 15 (AHRD V3.3 *** A0A1U8EV49_CAPAN) AT1G26810 Solyc05g007940.3 3 8 16 10 31 34 44 18 6 26 24 7 4 25 31 LERNALX L.esculentum ribonuclease lx Solyc05g007950.4 8 24 7 6 6 0 0 4 517 55 49 27 7 13 31 LERNALE L.esculentum ribonuclease le AT2G02990 Solyc05g007960.4 1972 1100 874 920 676 796 817 754 885 1057 769 886 818 1031 1047 O-fucosyltransferase (AHRD V3.3 *** A0A2P5FK44_TREOI) AT2G01480 Solyc05g007970.4 536 396 452 429 311 445 420 363 478 445 496 324 552 488 444 Phytanoyl-CoA dioxygenase (AHRD V3.3 *** A0A2G2VK26_CAPBA) AT2G01490 Solyc05g007980.3 1244 546 191 441 439 393 463 397 200 324 74 119 272 281 144 Sulfate transporter (AHRD V3.3 *** A1YKF8_BRASY) AT1G23090 Solyc05g007990.4 726 509 536 519 443 486 497 365 398 381 623 404 443 535 693 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A178VWR3_ARATH) AT2G01460 Solyc05g008000.3 63 59 139 123 77 81 75 84 95 67 72 57 96 88 66 RNA pyrophosphohydrolase (AHRD V3.3 *** A0A2G2VK41_CAPBA) AT1G30110 Solyc05g008010.3 6551 7991 15323 8174 10331 11836 11284 8333 8627 5361 11688 8033 11075 11592 14038 60S ribosomal protein L31 (AHRD V3.3 *** A0A1U8ELH9_CAPAN) AT2G19740 Solyc05g008020.4 49 93 119 189 138 184 118 111 176 115 137 143 149 67 53 mitogen-activated protein kinase 15 Solyc05g008030.1 62 93 41 90 112 76 96 103 120 74 50 91 53 132 57 ATP-dependent DNA helicase RecG (AHRD V3.3 *-* A0A2U1NGD0_ARTAN) Solyc05g008040.4 212 233 219 227 200 237 284 259 237 151 184 286 193 278 255 ATP-dependent DNA helicase RecG (AHRD V3.3 *** A0A1J3J3M9_NOCCA) AT2G01440 Solyc05g008050.3 8 10 23 16 12 12 6 3 11 7 20 8 6 17 13 Homeobox-leucine zipper protein HOX3 (AHRD V3.3 *** A0A2G3B5W9_CAPCH) AT2G01430 Solyc05g008060.4 2116 2043 1557 2205 656 661 439 453 2258 1135 2744 578 1867 1658 3444 SlPIN4 Solyc05g008070.4 115 83 37 96 42 56 27 39 62 34 56 36 50 44 52 Disease resistance protein (AHRD V3.3 *** A0A2U1M2V8_ARTAN) Solyc05g008080.3 15 6 3 11 13 1 3 1 1 1 2 1 4 4 3 NOD26-like intrinsic protein 4.2 Solyc05g008090.3 1011 984 1092 1048 713 862 829 749 1488 1071 1789 974 855 1032 1614 TPX2 (Targeting protein for Xklp2) protein family (AHRD V3.3 *-* A0A2U1NUC4_ARTAN) AT1G23060 Solyc05g008100.1 1619 731 576 1407 199 221 218 172 342 948 975 212 883 685 918 extensin (AHRD V3.3 *** XP_010320709.1) AT1G70985 Solyc05g008105.1 1010 449 220 454 77 53 57 67 258 417 427 149 497 565 583 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 --* AT1G23040.3) Solyc05g008120.4 54 17 237 44 2 14 3 7 59 25 129 85 41 52 73 DnaJ-like protein subfamily B member 6 (AHRD V3.3 *-* A0A2G3B5R9_CAPCH) Solyc05g008130.4 1113 488 503 692 215 112 132 165 386 532 505 400 555 655 476 Unknown protein Solyc05g008140.4 229 607 673 637 1262 1130 996 1234 1190 754 974 1199 487 746 493 Unknown protein Solyc05g008145.1 1 0 0 0 0 0 0 0 0 0 3 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G2XEV3_CAPBA) Solyc05g008150.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Fruit-specific protein (AHRD V3.3 *** A0A2G2VKF4_CAPBA) Solyc05g008155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Fruit-specific protein (AHRD V3.3 -** FSPM_SOLLC) Solyc05g008170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 -** AT2G25125.1) Solyc05g008180.3 733 748 766 777 614 611 799 576 866 706 836 748 802 807 1032 Nicotinate-nucleotide pyrophosphorylase [carboxylating] (AHRD V3.3 *** A0A2G2YBZ5_CAPAN) AT2G01350 Solyc05g008190.3 628 1043 708 520 562 650 653 593 603 378 624 650 1006 910 776 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1MKJ4_ARTAN) AT3G10530 Solyc05g008200.4 1980 1900 1960 2056 2235 2455 2410 2388 1954 1482 1367 1417 1717 1858 1930 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A (AHRD V3.3 *-* A0A2I0WJB6_9ASPA) Solyc05g008210.4 69 104 75 119 24 24 17 11 59 47 36 31 167 115 160 Plastid movement impaired protein (AHRD V3.3 *** A0A2P5FK82_TREOI) AT2G01340 Solyc05g008220.4 59 20 6 14 0 4 2 1 27 25 53 9 57 28 12 Plastid movement impaired protein (AHRD V3.3 *** A0A072VEV4_MEDTR) AT2G01340 Solyc05g008230.3 2765 1767 1182 1826 1411 1366 1283 1310 1582 1633 1328 1297 1457 1529 1786 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3B5V3_CAPCH) AT1G71020 Solyc05g008240.2 14 6 0 14 12 3 1 1 4 1 0 4 0 1 0 myb-related protein Hv1 (AHRD V3.3 --* XP_004238850.1) Solyc05g008250.2 0 0 0 0 0 0 1 0 4 0 0 0 10 6 0 R2R3MYB transcription factor 76 Solyc05g008260.3 903 1017 1014 913 936 1091 907 1052 1557 841 1001 985 1343 1189 1261 Peptidyl serine alpha-galactosyltransferase (AHRD V3.3 *** SRGT1_ARATH) AT3G01720 Solyc05g008270.3 105 238 223 243 249 237 301 249 212 164 327 154 250 217 262 DUF3326 domain-containing protein (AHRD V3.3 *** A0A1Q3BC49_CEPFO) Solyc05g008280.2 0 0 0 0 0 0 1 4 0 1 0 0 0 1 0 Peptidyl-prolyl cis-trans isomerase CYP59 (AHRD V3.3 *-* A0A1J3I931_NOCCA) Solyc05g008290.4 318 268 161 314 107 104 91 87 207 143 103 192 298 220 258 Multicopper oxidase LPR1 (AHRD V3.3 *-* A0A2G2VKE3_CAPBA) AT1G71040 Solyc05g008300.3 1525 3430 3220 3754 6516 6133 5678 7278 3336 2356 3106 5174 4018 3917 2066 Multicopper oxidase LPR1 (AHRD V3.3 *-* A0A2G2VKE3_CAPBA) Solyc05g008310.4 169 71 126 126 47 64 44 46 86 101 98 63 95 104 89 S receptor kinase (AHRD V3.3 *** A4UWL9_BRANA) Solyc05g008320.1 0 1 3 2 14 15 6 2 6 2 0 6 0 10 0 Fasciclin domain-containing protein (AHRD V3.3 *** A0A1Q3CJK8_CEPFO) AT5G40940 Solyc05g008330.3 136 213 142 195 133 154 108 141 123 145 123 146 223 141 172 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2XW13_CAPAN) AT1G71060 Solyc05g008340.3 720 855 1266 1174 1045 1323 1176 774 766 592 1216 755 983 1046 1026 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) AT1G71070 Solyc05g008350.3 2048 1866 2091 2129 1771 1861 2089 1612 1905 1837 1775 1942 1511 2057 2202 ABC transporter G family member 7 (AHRD V3.3 *** A0A2G2XVV0_CAPAN) AT2G01320 Solyc05g008360.1 5 0 0 0 0 0 0 0 0 1 0 0 1 0 0 Mediator of RNA polymerase II transcription subunit (AHRD V3.3 *** Q9ZU37_ARATH) Solyc05g008370.2 158 620 404 407 498 578 553 515 691 289 257 488 282 470 168 Ribose 5-phosphate isomerase A (AHRD V3.3 *** A0A1Y1IHK3_KLENI) AT1G71100 Solyc05g008380.4 599 457 1020 796 404 574 542 434 448 400 863 418 637 733 898 envelope glycoprotein B (AHRD V3.3 *** AT1G80540.3) AT1G71110 Solyc05g008390.3 795 351 205 314 182 216 167 152 145 278 351 240 201 224 267 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* A0A2U1L203_ARTAN) AT2G01275 Solyc05g008400.4 500 104 105 116 115 152 146 148 132 272 166 235 134 152 106 Repressor of RNA polymerase III transcription (AHRD V3.3 *** A0A1U8F9V8_CAPAN) AT5G13240 Solyc05g008420.4 642 368 360 395 363 354 408 311 310 388 369 388 349 354 330 Tetratricopeptide repeat protein 5 (AHRD V3.3 *** A0A2U1PT40_ARTAN) Solyc05g008430.4 5955 4531 6545 6550 4151 4392 5135 5014 3700 6011 6734 4821 4918 5326 4807 BRO1 domain (AHRD V3.3 *** A0A200QUU8_9MAGN) AT1G15130 Solyc05g008440.3 7518 2417 2335 1896 1243 1549 1534 1262 1976 2116 2344 1697 1428 1882 2471 histidine-rich glycoprotein (AHRD V3.3 *** XP_004238870.1) AT2G01100 Solyc05g008450.3 777 1316 1306 1987 1244 1370 1566 1519 1363 1810 1318 1513 1242 1403 1225 Phenol hydroxylase reductase (AHRD V3.3 *** A0A200QUX1_9MAGN) AT1G15140 Solyc05g008460.4 3756 9213 6279 6943 8924 8282 8223 10222 9242 8461 5382 8303 9013 9141 5389 ATP synthase subunit beta (AHRD V3.3 *** A0A2G2VK08_CAPBA) AT5G08670 Solyc05g008470.3 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 F-box/FBD/LRR-repeat protein (AHRD V3.3 *-* A0A2I0X4R9_9ASPA) Solyc05g008480.4 174 343 345 329 464 488 503 443 212 137 284 331 321 353 143 Histone chaperone (AHRD V3.3 *-* A9U2F4_PHYPA) Solyc05g008490.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g008495.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc05g008500.3 6 0 3 5 0 0 2 0 0 4 1 0 4 0 2 Protein DETOXIFICATION (AHRD V3.3 *** A0A0K9S336_SPIOL) AT1G15170 Solyc05g008510.3 429 339 388 233 164 187 157 185 190 298 215 205 560 291 248 Protein DETOXIFICATION (AHRD V3.3 *** A0A328D6Y5_9ASTE) AT1G15170 Solyc05g008520.3 391 441 531 313 330 350 325 327 353 300 282 392 535 432 363 Cyclin-D1-binding protein (AHRD V3.3 *** Q9C993_ARATH),Pfam:PF13324 AT1G22970 Solyc05g008530.3 1084 1046 909 954 724 707 809 712 1009 1342 753 1125 1225 1191 904 Sec-independent protein translocase protein TATC, chloroplastic (AHRD V3.3 *** A0A1U8EL26_CAPAN) AT2G01110 Solyc05g008540.3 31 244 280 259 437 409 376 380 242 119 241 237 147 315 124 Origin of replication complex subunit 4 (AHRD V3.3 *** A0A2G2VJZ3_CAPBA) AT2G01120 Solyc05g008560.1 66 87 97 55 78 95 104 116 98 67 47 79 88 87 68 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R8L9_9MAGN) AT1G22960 Solyc05g150106.1 87 94 75 119 115 138 137 91 79 64 90 80 95 99 72 Unknown protein Solyc05g008570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acyl-[acyl-carrier-protein] hydrolase (AHRD V3.3 *-* A0A2G2VK01_CAPBA) Solyc05g008580.3 197 336 249 293 516 599 713 524 404 287 214 284 186 272 170 CDP-diacylglycerol--serine O-phosphatidyltransferase 1 (AHRD V3.3 *** A0A1U8EJL5_CAPAN) AT1G15110 Solyc05g008590.4 413 638 590 1051 756 796 814 765 503 797 525 606 685 762 475 Unknown protein Solyc05g008600.3 2554 4415 3202 3400 3826 3158 3183 4393 4416 4372 2733 4142 5794 4815 3950 ripening regulated protein (DDTFR6/A) AT2G01140 Solyc05g008610.3 1494 986 1000 861 681 728 756 734 807 917 889 845 1202 1069 1202 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9LV19_ARATH) AT3G18210 Solyc05g008620.4 32 151 176 151 229 236 193 228 137 90 113 224 128 222 19 GINS complex (AHRD V3.3 *** A0A2U1Q9H5_ARTAN) AT3G55490 Solyc05g008625.1 141 78 80 93 73 89 67 54 63 84 138 76 90 97 133 Unknown protein Solyc05g008630.4 2513 1879 1586 1588 1501 1491 1548 1462 1687 1770 1740 1598 2020 2163 2473 Nuclear poly(A) polymerase 2 (AHRD V3.3 *-* A0A2G2YBY9_CAPAN) Solyc05g008640.1 31 12 46 18 18 19 24 22 44 23 24 26 36 24 18 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1QJE6_ARTAN) AT1G15100 Solyc05g008650.1 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 Late blight resistance protein R1-A (AHRD V3.3 *-* A0A2G3B523_CAPCH) Solyc05g008660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g008670.3 0 1 0 0 0 0 1 1 4 1 5 2 0 0 16 Zinc finger transcription factor 36 AT1G68200 Solyc05g008680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methyltransferase (AHRD V3.3 *** A0A1U8EK80_CAPAN) Solyc05g008690.2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 Plant resistance protein (AHRD V3.3 *-* O81136_SOLLC) Solyc05g008700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EIN3-binding F-box protein 1 (AHRD V3.3 *-* Q2PQJ1_SOLLC) Solyc05g008710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g008720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EIN3-binding F-box protein 1 (AHRD V3.3 --* XP_011069870.1) Solyc05g008730.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 EIN3-binding F-box protein 1 (AHRD V3.3 *-* Q2PQJ1_SOLLC) Solyc05g008750.3 135 156 228 137 210 195 217 187 173 123 143 168 174 120 177 Style cell-cycle inhibitor 1 (AHRD V3.3 *-* SCI1_ARATH) AT1G79200 Solyc05g008770.3 587 693 793 816 566 670 646 620 581 731 547 697 705 652 684 Amino-acid permease BAT1-like protein (AHRD V3.3 *-* A0A2G3B695_CAPCH) Solyc05g008780.4 400 964 843 891 1089 1018 1172 1038 1460 741 947 736 1010 1148 1300 Calponin-like domain protein (AHRD V3.3 *-* F4HWC3_ARATH) AT1G20970 Solyc05g008790.4 477 328 464 454 333 447 414 267 406 334 462 377 364 468 567 Ceramide kinase (AHRD V3.3 *** A0A2G3B681_CAPCH) AT5G51290 Solyc05g008800.4 720 766 1113 938 1037 1117 1051 1116 802 844 776 1039 753 782 771 lipid phosphate phosphatase 2-like (AHRD V3.3 *** A0A1S4AJT8_TOBAC) AT1G15080 Solyc05g008810.4 1122 630 1002 1106 454 554 588 494 842 971 1122 814 847 1029 1280 Lipid phosphate phosphatase (AHRD V3.3 *** A0A2R6PGX1_ACTCH) Solyc05g008820.4 286 139 114 160 11 6 12 5 42 124 77 34 138 174 365 Lipid phosphate phosphatase (AHRD V3.3 *** A0A2P5ENE9_TREOI) Solyc05g008830.3 4731 3596 4248 5243 4432 4267 4893 4620 3914 4428 4836 4459 3980 4224 4366 Octicosapeptide/Phox/Bem1p family protein (AHRD V3.3 *-* A0A2K3L5A6_TRIPR) AT2G01190 Solyc05g008840.2 3 41 57 77 136 148 199 128 80 6 94 88 12 39 48 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1NS63_ARTAN) Solyc05g008850.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 auxin-regulated IAA32 AT2G01200 Solyc05g008860.4 845 889 1337 885 949 1179 1019 1049 1002 722 1219 820 695 723 675 Receptor protein kinase-like protein (AHRD V3.3 *** A0A2R6P9S7_ACTCH) AT2G01210 Solyc05g008870.3 1138 683 933 915 647 761 743 621 717 711 989 769 654 706 926 Nucleotidylyl transferase superfamily protein (AHRD V3.3 *** A0A2U1NI52_ARTAN) AT2G01220 Solyc05g008880.1 3 2 0 4 0 0 1 0 4 2 11 0 0 3 0 Unknown protein Solyc05g008890.3 30 45 129 108 50 56 57 18 43 47 175 59 39 76 140 Reticulon-like protein (AHRD V3.3 *** A0A1U8FER2_CAPAN) Solyc05g008895.1 577 1094 3507 2640 1962 1976 1933 1650 2451 1125 2323 1210 5175 4321 5800 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A1I9LP30_ARATH) Solyc05g008900.4 837 832 1147 1038 880 861 920 779 657 708 996 739 974 909 1180 DUF1218 domain-containing protein (AHRD V3.3 *** A0A1Q3BM99_CEPFO) AT1G68220 Solyc05g008910.3 0 0 0 1 0 0 0 2 0 0 0 0 0 3 2 Class I glutamine amidotransferase-like superfamily protein (AHRD V3.3 *-* F4KA45_ARATH) Solyc05g008920.3 1060 813 482 712 564 726 638 593 477 675 579 527 722 506 803 DUF789 domain-containing protein (AHRD V3.3 *** A0A1Q3BM86_CEPFO) AT2G01260 Solyc05g008930.3 537 360 409 444 295 387 384 307 378 318 427 306 344 337 517 Protein kinase family protein (AHRD V3.3 *** A0A1P8BDK9_ARATH) Solyc05g008940.3 507 281 377 183 31 8 15 15 156 266 288 82 474 462 216 Protein kinase family protein (AHRD V3.3 *-* A0A2U1MH78_ARTAN) AT1G25390 Solyc05g008950.4 434 202 236 118 22 37 27 23 124 161 125 50 362 205 195 Protein kinase family protein (AHRD V3.3 *-* A0A1P8BDK9_ARATH) Solyc05g008960.3 339 145 154 103 24 41 36 57 52 93 79 35 132 163 179 Protein kinase family protein (AHRD V3.3 *** A0A1P8BDJ0_ARATH) AT1G25390 Solyc05g008970.1 59 65 35 34 16 46 24 25 16 25 32 27 38 67 60 Protein kinase family protein (AHRD V3.3 *-* A0A1P8BDJ0_ARATH) AT1G25390 Solyc05g008980.2 374 171 168 162 31 48 11 20 40 174 148 26 235 267 137 Protein kinase family protein (AHRD V3.3 *** A0A2U1MH78_ARTAN) AT1G25390 Solyc05g008990.3 31 40 37 31 2 13 7 3 31 30 41 11 25 18 46 Protein kinase family protein (AHRD V3.3 *-* A0A2U1MH78_ARTAN) AT1G25390 Solyc05g009010.1 660 275 382 256 7 29 10 9 122 155 809 46 521 414 537 Protein kinase family protein (AHRD V3.3 *-* A0A2U1MH78_ARTAN) Solyc05g009020.4 527 299 343 294 247 265 268 252 278 305 330 274 328 336 328 Mitochondrial carrier protein (AHRD V3.3 *** A0A200Q134_9MAGN) AT1G25380 Solyc05g009030.4 632 980 814 820 1137 1005 1011 1182 1107 851 697 1070 1318 1141 725 3-isopropylmalate dehydrogenase (AHRD V3.3 *** B5LAV1_CAPAN) AT1G80560 Solyc05g009040.3 299 97 58 92 1 1 1 13 22 23 14 1 67 186 246 Receptor-like protein kinase (AHRD V3.3 *** D3G6F0_CAPAN) AT5G38280 Solyc05g009050.3 274 247 294 208 125 149 159 132 308 247 372 177 321 266 377 Receptor-like protein kinase (AHRD V3.3 *** D3G6F0_CAPAN) AT1G67000 Solyc05g009060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g009070.4 555 490 614 517 297 398 374 264 419 431 464 268 543 424 279 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1KGE8_ARTAN) Solyc05g009080.4 486 432 274 351 716 621 622 808 539 453 290 482 313 293 249 Cyclase/dehydrase family protein (AHRD V3.3 *** A0A2K3P6S6_TRIPR) AT5G08720 Solyc05g009090.3 6 4 5 16 0 0 1 0 3 1 9 1 8 4 16 Receptor-like protein kinase (AHRD V3.3 *** D3G6F0_CAPAN) AT1G67000 Solyc05g009100.4 504 1468 1477 1145 2088 1940 1876 2196 1528 1009 1248 1623 1230 1362 749 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A2R6PBA1_ACTCH) AT1G68400 Solyc05g009110.2 19 16 2 9 0 0 0 0 1 7 1 0 22 16 11 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MN76_TRIPR) Solyc05g009120.3 19 13 8 21 7 7 10 11 8 9 33 6 8 24 5 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MN76_TRIPR) Solyc05g009130.4 132 63 127 183 58 69 80 49 72 59 211 141 102 125 204 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MN76_TRIPR) Solyc05g009140.3 231 206 184 299 211 178 151 226 281 220 156 206 334 290 240 Metallo-beta-lactamase superfamily protein (AHRD V3.3 *** A0A2K3NNB2_TRIPR) AT1G25375 Solyc05g009150.4 1731 1149 1987 2002 1118 1280 1435 1095 1402 1225 1967 1092 951 1457 2747 Zinc finger protein (AHRD V3.3 *** A0A200QRC0_9MAGN) Solyc05g009160.3 460 568 469 515 622 576 554 554 593 363 507 398 573 525 512 Chaperone protein dnaJ 16 (AHRD V3.3 *** A0A1U8ELY3_CAPAN) AT1G68370 Solyc05g009170.3 47 18 30 43 0 0 0 2 3 10 14 6 23 53 70 Zinc finger protein 8 (AHRD V3.3 *** A0A2G3B627_CAPCH) AT1G68360 Solyc05g009180.1 55 78 98 107 65 45 71 41 116 25 52 30 177 156 116 Zinc finger protein 8 (AHRD V3.3 *** A0A2G3B641_CAPCH) AT1G68360 Solyc05g009190.4 2005 2652 2368 1863 2180 1981 2260 2085 2090 1751 2148 1627 2678 2496 1908 chlorophyll a/b-binding protein AT5G38830 Solyc05g009200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (DUF1639) (AHRD V3.3 *** AT1G68340.1) Solyc05g009210.2 184 144 194 220 186 155 117 114 158 165 293 114 212 205 505 membrane-associated kinase regulator (AHRD V3.3 *** AT1G68330.1) Solyc05g009220.3 1710 1770 1282 1439 1442 1334 1433 1792 1723 1622 1172 1534 1842 1949 1394 Glutamine--tRNA ligase (AHRD V3.3 *** A0A2G2YC56_CAPAN) AT1G25350 Solyc05g009230.3 68 26 9 19 1 5 2 7 14 31 28 15 31 15 22 MYB transcription factor (AHRD V3.3 *-* B4FU27_MAIZE) AT1G68320 Solyc05g009240.3 1 0 0 0 0 4 0 0 0 2 0 3 0 0 0 DUF639 domain-containing protein (AHRD V3.3 *** A0A1Q3DGQ0_CEPFO) AT2G21720 Solyc05g009250.1 61 66 55 38 39 36 40 59 60 41 38 61 49 54 53 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3AQY9_CAPCH) Solyc05g009253.1 65 68 31 38 53 61 42 52 74 43 19 54 45 91 40 Pentatricopeptide repeat protein (AHRD V3.3 *** A0A2U1MNU4_ARTAN) AT1G12700 Solyc05g009257.1 28 29 13 45 25 30 38 21 26 24 20 15 10 15 59 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g55840-like (AHRD V3.3 *-* XP_025887151.1) Solyc05g009260.1 149 112 189 140 113 162 183 116 111 93 158 114 111 120 208 Protein TRANSPORT INHIBITOR RESPONSE 1 (AHRD V3.3 *-* A0A2G2WGW2_CAPBA) Solyc05g009270.4 1515 1166 1247 2071 142 217 127 92 673 795 1347 545 1720 1224 2182 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G3B5Z8_CAPCH) Solyc05g009275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc05g009280.4 0 10 5 3 15 13 7 16 9 3 5 4 2 16 30 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A1U8EJW1_CAPAN) Solyc05g009290.4 994 682 695 513 491 488 381 398 668 468 534 507 982 746 758 protein FLX-like 3 (AHRD V3.3 *** A0A2I4HUE3_9ROSI) Solyc05g009300.1 405 472 705 646 898 800 885 715 446 604 988 543 371 503 586 transmembrane protein (AHRD V3.3 *-* AT2G29180.1) AT2G29180 Solyc05g009310.3 46 13 166 126 6 10 17 2 105 60 233 98 48 170 327 Zinc finger protein CONSTANS-LIKE 7 (AHRD V3.3 *** A0A2G2VK65_CAPBA) AT1G25440 Solyc05g009320.4 0 0 0 2 3 2 1 2 0 0 0 0 3 1 3 LOB domain-containing protein 40 (AHRD V3.3 *** A0A2G2VK71_CAPBA) Solyc05g009330.3 484 947 1071 963 1329 1106 1131 1013 920 996 1084 978 976 933 836 Fiber protein Fb34 (AHRD V3.3 *** B4FVT6_MAIZE) AT1G13380 Solyc05g009340.1 1 15 42 2 0 8 4 5 23 20 169 2 23 1 41 Unknown protein Solyc05g009350.4 1257 992 664 586 448 444 379 387 598 606 619 493 747 713 729 Zinc finger transcription factor 37 Solyc05g009360.4 1351 1044 1027 951 830 1080 921 720 923 834 1173 681 991 1094 1475 translocase subunit seca (AHRD V3.3 *** AT1G13390.2) Solyc05g009370.4 336 854 734 579 955 707 734 802 849 410 594 598 514 682 685 50S ribosomal protein L15 (AHRD V3.3 *** A0A2G2YCB4_CAPAN) AT3G25920 Solyc05g009380.4 1677 1026 1295 1726 789 786 754 960 349 959 536 1289 261 1191 328 lyrate AT1G68480 Solyc05g009390.3 90 290 397 382 539 375 451 399 522 297 496 407 336 386 267 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1Q5G1_ARTAN) AT1G77420 Solyc05g009400.3 33 47 21 50 15 33 37 39 38 26 40 34 61 33 27 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QF02_9MAGN) AT1G13410 Solyc05g009405.1 9 13 36 33 14 12 20 12 10 8 32 22 24 18 28 Unknown protein Solyc05g009410.3 0 0 0 2 17 1 1 1 2 2 11 1 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G3B611_CAPCH) AT1G68460 Solyc05g009420.1 471 602 790 446 538 574 496 532 344 398 698 316 335 284 290 transmembrane protein (AHRD V3.3 *-* AT1G25400.2) AT1G68440 Solyc05g009430.3 10 13 35 9 0 5 3 2 34 17 34 11 4 19 15 Endonuclease 3 (AHRD V3.3 *** A0A2G3B636_CAPCH) AT1G68290 Solyc05g009440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heavy metal-associated isoprenylated plant protein 3 (AHRD V3.3 *** A0A1J6HS54_NICAT) Solyc05g009460.3 922 1436 1605 1138 1065 1342 1111 824 1144 642 1222 861 1300 1576 901 ethylene-responsive transcription factor ERF118-like (AHRD V3.3 --* XP_022968247.1) AT1G68552 Solyc05g009470.4 771 3965 4488 4792 3865 3714 3586 3769 6333 2585 3421 5106 3505 4195 2920 Glycoside hydrolase family 31 (AHRD V3.3 *** A0A2U1PBY7_ARTAN) AT1G68560 Solyc05g009480.1 327 137 361 78 8 11 23 0 105 178 319 31 534 193 286 Unknown protein Solyc05g009490.3 36 22 30 11 2 2 0 0 13 22 24 8 9 7 5 Unknown protein Solyc05g009500.3 5406 2849 1656 2676 1051 850 922 946 2453 4078 2460 887 2972 2054 2277 Protein NRT1/ PTR FAMILY 3.1 (AHRD V3.3 *** A0A1U8GM13_CAPAN) AT1G68570 Solyc05g009510.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g009515.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-like ribonuclease (AHRD V3.3 *** Q9FQL6_PRUDU) Solyc05g009520.2 1080 736 870 698 414 418 535 259 783 918 693 583 1412 1071 1027 hypothetical protein (AHRD V3.3 *** AT1G13360.3) Solyc05g009530.3 270 1233 839 844 1090 1078 1057 1331 1074 825 574 987 1104 1052 638 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (AHRD V3.3 *** A0A1U8EIE7_CAPAN) AT3G25860 Solyc05g009540.3 2457 1634 1640 1815 1162 1349 1477 1184 1543 1638 1578 1296 1479 1910 2007 Serine/threonine-protein kinase PRP4-like protein (AHRD V3.3 *-* A0A2G2VK52_CAPBA) AT3G25840 Solyc05g009550.3 210 45 14 31 0 0 4 0 17 9 16 5 59 72 144 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* Q9FX63_ARATH) AT1G13340 Solyc05g009560.4 22 109 82 77 117 110 95 109 123 50 72 111 87 134 35 Homologous-pairing protein 2-like protein (AHRD V3.3 *** A0A1J3FHR4_NOCCA) AT1G13330 Solyc05g009570.3 56 91 144 127 162 141 162 129 129 73 72 107 51 90 141 30S ribosomal protein 3, chloroplastic (AHRD V3.3 *** A0A2G2VK36_CAPBA) AT1G68590 Solyc05g009580.3 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 Aluminum-activated malate transporter 9 (AHRD V3.3 *** A0A2G3B6A6_CAPCH) Solyc05g009583.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc05g009587.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc05g009590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aluminum-activated malate transporter 9 (AHRD V3.3 *** A0A2G3B6C3_CAPCH) Solyc05g009600.4 3707 4818 4974 5330 5626 5535 5792 5311 4728 4335 4399 4833 4792 4714 3928 Protein phosphatase 2A regulatory subunit A (AHRD V3.3 *** C0L8B0_BETPN) Solyc05g009610.1 293 130 116 199 62 70 73 61 191 297 690 237 66 131 112 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1PVQ0_ARTAN) AT1G68620 Solyc05g009620.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein PLANT CADMIUM RESISTANCE 9-like (AHRD V3.3 *** A0A1U7Y9Y9_NICSY) Solyc05g009630.4 696 662 1173 1164 645 841 894 425 595 920 1415 869 880 769 978 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN),Pfam:PF18052 Solyc05g009640.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 037 Solyc05g009650.4 381 95 46 59 3 1 1 3 10 41 86 42 46 115 100 Unknown protein Solyc05g009660.4 1240 1492 1946 1590 1792 2108 2035 1857 1633 1117 1991 2011 1320 1942 1570 Transcription factor PERIANTHIA (AHRD V3.3 *** A0A2G2YC86_CAPAN) AT1G68640 Solyc05g009670.3 517 267 254 347 210 250 290 187 227 259 351 270 298 342 265 Plasma-membrane choline transporter family protein (AHRD V3.3 *** A0A2U1PYZ6_ARTAN) AT1G25500 Solyc05g009680.1 1074 2441 1880 2472 4538 4124 3840 4590 2580 2144 2182 2899 1898 1815 1607 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** Q9C6M0_ARATH) AT1G25510 Solyc05g009690.3 1273 1283 1817 1712 1182 1258 1212 1055 925 1136 1583 1019 1547 1287 1518 GDT1-like protein 5 (AHRD V3.3 *** A0A2G2V9V8_CAPBA) AT1G25520 Solyc05g009700.4 33 73 53 88 25 33 33 33 48 31 40 24 23 53 225 Lysine histidine transporter-like 1 (AHRD V3.3 *** A0A2G2YN73_CAPAN) AT1G25530 Solyc05g009710.4 2064 1052 1130 913 543 581 635 413 550 803 840 569 914 986 1455 Mediator of RNA polymerase II transcription subunit 25 (AHRD V3.3 *-* A0A2G3CLS9_CAPCH) Solyc05g009720.3 1215 629 596 423 558 648 744 552 445 636 747 383 780 808 987 Myb-like transcription factor family protein (AHRD V3.3 *** A0A1P8AW12_ARATH) AT1G68670 Solyc05g009740.1 364 276 410 367 143 158 170 178 291 356 346 289 286 328 295 Disease resistance protein (AHRD V3.3 *** A0A2U1Q201_ARTAN) Solyc05g009745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g009750.1 0 0 2 2 3 0 2 0 0 5 0 0 2 0 4 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc05g009760.3 136 112 150 115 23 37 55 28 118 101 160 54 144 105 161 Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 --* AT5G48620.6) Solyc05g009770.3 13 33 35 52 56 55 31 48 74 3 23 39 13 47 19 Zinc finger protein (AHRD V3.3 *** A0A200Q3J5_9MAGN) AT1G13290 Solyc05g009780.3 259 251 296 268 187 142 187 164 326 184 284 246 194 329 198 Methionine aminopeptidase (AHRD V3.3 *** A0A2G2VA22_CAPBA) AT1G13270 Solyc05g009790.1 1668 1028 1306 339 76 67 61 68 487 756 2006 466 493 446 487 AP2/B3 transcription factor family protein (AHRD V3.3 *** A0A2U1LJK2_ARTAN) AT1G25560 Solyc05g009800.4 453 579 497 662 570 503 569 594 619 687 609 556 468 394 357 Leucine-rich repeat receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2I0VIY5_9ASPA) AT1G25570 Solyc05g009810.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g009820.4 549 2575 2407 3136 4548 4451 5106 4734 2886 3258 3420 3330 1177 1522 913 Hexosyltransferase (AHRD V3.3 *** A0A2G2YCM5_CAPAN) AT1G13250 Solyc05g009840.3 1644 1444 1962 1308 1254 1282 1188 1246 1485 1812 1837 1394 1779 1602 1386 NAC domain-containing protein 8 (AHRD V3.3 *** A0A2G2YCM7_CAPAN) AT1G25580 Solyc05g009850.4 2392 1995 1455 1250 1202 1140 1314 1534 1551 1464 1297 1591 1421 1690 1435 GC-rich sequence DNA-binding factor (AHRD V3.3 *** A0A200R9S4_9MAGN) AT5G08550 Solyc05g009860.3 1 0 0 4 0 0 0 0 1 0 1 0 0 2 5 leucoanthocyanidin reductase-like (AHRD V3.3 *-* A0A2I4FWR0_9ROSI) Solyc05g009865.1 1 2 0 3 0 2 0 0 2 0 0 0 3 0 0 Leucoanthocyanidin reductase (AHRD V3.3 *-* G9C076_HUMLU) Solyc05g009870.4 544 338 319 370 286 256 318 244 226 516 302 355 355 278 321 Transmembrane Fragile-X-F-associated protein (AHRD V3.3 *** Q94K50_ARATH) AT1G68820 Solyc05g009880.3 332 670 886 964 900 1069 770 814 647 434 914 622 601 579 1033 bHLH transcription factor 038 AT1G68810 Solyc05g009890.1 236 1241 584 1137 1822 1765 1494 2221 1132 1491 973 1085 817 853 469 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A061EI23_THECC) AT3G25700 Solyc05g009900.3 165 174 190 365 95 81 70 95 318 287 358 212 116 127 147 TCP transcription factor 25 AT1G68800 Solyc05g009910.3 626 671 631 733 629 668 652 603 753 492 617 668 847 772 715 coiled-coil domain-containing protein 130-like (AHRD V3.3 *** A0A2I4EWB9_9ROSI) AT1G25682 Solyc05g009915.1 6 18 32 48 52 19 17 20 23 9 22 0 16 10 54 CLAVATA3/ESR (CLE)-related protein 12 (AHRD V3.3 *** A0A2G3B6J3_CAPCH) AT1G73965 Solyc05g009920.4 239 338 256 295 338 369 424 368 347 263 382 277 201 280 363 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2K3PL22_TRIPR) AT1G26090 Solyc05g009930.3 1750 1871 1516 1406 1376 1563 1400 1606 2144 1108 1524 1516 1778 1526 1687 Protein CHUP1, chloroplastic (AHRD V3.3 *** A0A2G3B6M5_CAPCH) AT3G25690 Solyc05g009940.4 585 598 509 573 649 536 551 612 636 583 481 623 528 610 470 oxidoreductase/transition metal ion-binding protein (AHRD V3.3 *-* AT5G52410.3) AT3G25680 Solyc05g009950.3 420 214 518 497 579 517 487 401 370 451 728 401 271 306 924 Cytochrome b561 (AHRD V3.3 *** A0A200Q8Q9_9MAGN) AT1G26100 Solyc05g009960.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TauD/TfdA-like domain-containing protein (AHRD V3.3 *** A0A2U1PT45_ARTAN) Solyc05g009970.4 0 2 2 6 6 6 9 10 4 2 3 0 5 4 0 Unknown protein Solyc05g009980.4 10078 11201 8391 10733 11238 10859 10524 13667 11059 12357 7917 11408 10939 9956 8512 Protein decapping 5 (AHRD V3.3 *** A0A2G3B6L4_CAPCH) AT1G26110 Solyc05g009990.4 135 151 261 228 238 234 166 233 166 137 148 274 122 228 74 Leucine-rich repeat (AHRD V3.3 *** A0A200R8J0_9MAGN) Solyc05g010000.1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 Protein IDA (AHRD V3.3 *** A0A2G3B6Q4_CAPCH) AT1G68765 Solyc05g010010.1 69 164 117 155 139 129 75 108 155 115 117 183 97 154 175 Protein MIZU-KUSSEI 1 (AHRD V3.3 *** A0A2G2VKP6_CAPBA) AT3G25640 Solyc05g010015.1 787 793 1061 992 963 1060 843 891 761 798 973 817 846 840 1004 Nudix hydrolase 1 (AHRD V3.3 *** A0A2G3B6G9_CAPCH) AT1G68760 Solyc05g010030.4 503 293 216 56 0 0 2 0 13 286 22 6 560 70 36 Unknown protein Solyc05g010040.2 513 115 235 188 0 0 0 0 33 98 132 3 269 220 356 Unknown protein Solyc05g010045.1 2 0 0 0 0 0 0 0 0 0 0 0 0 3 0 Unknown protein Solyc05g010050.3 394 376 637 472 517 517 517 451 495 440 585 481 502 501 820 Alpha/Beta hydrolase fold protein (AHRD V3.3 *** A0A2U1Q9F9_ARTAN) AT1G26120 Solyc05g010060.4 73 168 342 401 193 141 210 92 190 205 329 47 428 244 423 Phosphate transporter PHO1-3 (AHRD V3.3 *** A0A2G3B6L2_CAPCH) AT1G68740 Solyc05g010070.3 235 149 149 127 149 177 170 172 150 140 128 149 144 184 152 DNL-type zinc finger protein (AHRD V3.3 *-* A0A1J3H0F3_NOCCA) Solyc05g010080.3 34 783 422 1318 775 640 1150 597 332 1097 901 748 66 481 1005 lysine-rich arabinogalactan protein 19 (AHRD V3.3 *-* XP_004238980.1) Solyc05g010090.2 0 0 0 0 0 1 0 0 0 0 12 0 0 0 0 Unknown protein Solyc05g010100.4 1853 1759 1413 1716 1526 1903 1824 1790 1768 1452 1651 1441 1456 1666 1896 tRNA-specific adenosine deaminase (AHRD V3.3 *-* A0A2G2VQT2_CAPBA) Solyc05g010120.4 861 713 1172 1041 582 718 753 625 900 984 1224 762 744 759 1174 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A1U8EJE6_CAPAN) Solyc05g010130.1 0 0 0 6 0 0 0 0 0 0 1 0 0 1 0 Transmembrane protein (AHRD V3.3 --* Q9LI85_ARATH) AT3G25597 Solyc05g010140.3 1113 1197 894 2280 1209 1099 1775 1491 902 2231 810 1016 960 1097 786 Proline-rich receptor-like protein kinase PERK12 (AHRD V3.3 *-* A0A2G2VKB7_CAPBA) AT1G68690 Solyc05g010150.3 161 257 368 246 409 335 385 292 263 163 266 268 322 281 231 HD domain-containing protein 2 (AHRD V3.3 *** A0A2G2YCL6_CAPAN) AT1G26160 Solyc05g010160.3 980 1816 1080 1009 1375 1220 1521 1518 1083 766 770 1017 1368 1611 921 Importin-9 (AHRD V3.3 *** A0A1J3JQN3_NOCCA) AT1G26170 Solyc05g010170.2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* Q93YQ5_ARATH) Solyc05g010175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1KE89_ARTAN) Solyc05g010180.4 141 327 91 248 197 283 297 236 345 168 62 206 110 106 125 Carotene isomerase (AHRD V3.3 *** A0A200PZS7_9MAGN) AT1G57770 Solyc05g010190.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 egg cell-secreted protein 1.4-like (AHRD V3.3 -** XP_006474659.1) Solyc05g010200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g010210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *-* A0A200QAM7_9MAGN) Solyc05g010220.2 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200PVC2_9MAGN) Solyc05g010240.4 142 194 626 927 154 126 167 160 642 181 681 541 241 491 664 Chaperonin-60 beta4 (AHRD V3.3 *** A0A0F7J500_9ROSI) Solyc05g010250.3 583 647 818 2777 1217 992 1327 1265 814 1620 1029 949 810 799 863 Acyl-CoA N-acyltransferase (AHRD V3.3 *** A0A2U1PY80_ARTAN) AT1G26220 Solyc05g010260.4 318 706 491 625 954 714 748 1003 1097 642 490 966 792 843 555 6-phosphogluconate dehydrogenase, decarboxylating (AHRD V3.3 *** A0A1U8F1N4_CAPAN) Solyc05g010270.1 5 8 35 11 0 2 0 8 9 2 20 2 0 5 17 hypothetical protein (AHRD V3.3 --* AT5G38790.1) Solyc05g010280.3 562 544 710 669 495 637 705 549 470 534 596 476 514 520 476 LAG1-like longevity assurance protein (AHRD V3.3 *** A0A2U1L161_ARTAN) AT1G13580 Solyc05g010290.3 437 708 600 570 683 588 555 694 602 643 391 614 736 662 453 trigger factor (AHRD V3.3 *** AT3G25545.1) AT3G25545 Solyc05g010300.4 2182 2175 3034 2736 2853 3052 2989 2217 1899 1582 2728 2109 2848 2512 2546 DNA-directed RNA polymerase family protein (AHRD V3.3 *** A0A2U1KFY6_ARTAN) AT2G15430 Solyc05g010310.3 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 Chalcone-flavonone isomerase family protein (AHRD V3.3 *** A0A193AUW5_SOLME) AT3G55120 Solyc05g010320.4 484 1085 773 1119 726 708 759 618 1454 883 962 1081 1224 1057 1256 Chalcone-flavonone isomerase family protein (AHRD V3.3 *** A0A193AUW5_SOLME) AT3G55120 Solyc05g010330.4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 Peroxidase (AHRD V3.3 *** K4BXK6_SOLLC) AT1G68850 Solyc05g010340.3 235 262 411 321 275 181 260 294 434 248 388 362 281 403 446 Uridine kinase (AHRD V3.3 *** A0A200QQP2_9MAGN) AT1G26190 Solyc05g010345.1 212 181 188 241 283 342 324 256 296 225 321 290 239 272 237 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *** A0A1Q3BUG5_CEPFO) Solyc05g010360.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *** A0A1Q3BUG5_CEPFO) Solyc05g010390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Low affinity sulfate transporter 3 (AHRD V3.3 *-* A0A2G2VM08_CAPBA) Solyc05g010400.3 927 1573 1417 1361 2184 2161 2100 1863 1676 1007 1751 1174 1390 1429 1487 protein NSP-INTERACTING KINASE 1-like (AHRD V3.3 *** A0A2G2YCG2_CAPAN) AT3G25560 Solyc05g010420.2 16142 36135 25083 40738 54141 64287 63692 50813 76952 64351 39919 72387 43400 50259 27352 S-adenosylmethionine decarboxylase AT3G25570 Solyc05g010425.1 11674 27096 12574 27273 36654 28852 29136 36886 49994 42804 24001 53711 26072 31581 14665 S-adenosylmethionine decarboxylase (AHRD V3.3 *-* Q6KC47_PRUPE) AT3G02468 Solyc05g010440.2 151 169 116 130 148 168 136 191 136 206 70 194 187 128 85 Choline/ethanolaminephosphotransferase 1 (AHRD V3.3 *-* A0A2G2YCJ3_CAPAN) Solyc05g010450.1 424 159 133 400 20 22 14 24 140 194 138 53 177 223 365 micronuclear linker histone polyprotein-like protein (AHRD V3.3 *-* AT3G25590.1) AT3G25590 Solyc05g010460.4 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (DUF1262) (AHRD V3.3 *** AT1G13490.2) AT1G13520 Solyc05g010470.4 1444 1199 790 621 584 591 635 659 542 518 605 646 925 1007 717 WD40 repeat (AHRD V3.3 *** A0A200QLQ1_9MAGN) AT2G47990 Solyc05g010490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box associated domain (AHRD V3.3 *** A0A200RB82_9MAGN) Solyc05g010500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200RB96_9MAGN) Solyc05g010510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein At3g07870-like (AHRD V3.3 *-* A0A2I4DWM2_9ROSI) Solyc05g010512.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g010514.1 0 0 0 0 2 1 1 1 0 2 0 0 1 0 0 Unknown protein Solyc05g010516.1 4 12 1 4 19 28 25 20 1 1 0 3 5 7 0 Basic leucine zipper 43 (AHRD V3.3 *** A0A2G2YCG7_CAPAN) Solyc05g010518.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Anthranilate phosphoribosyltransferase, chloroplastic (AHRD V3.3 --* A0A2G3DFN4_CAPCH) Solyc05g010530.3 525 235 230 242 127 79 129 96 129 126 161 118 302 343 254 Protein kinase family protein (AHRD V3.3 *-* A0A2U1MH78_ARTAN) Solyc05g010540.2 277 403 406 441 538 443 433 561 360 302 247 318 426 431 290 F-box protein SKIP23-like (AHRD V3.3 *** A0A2I4DIK4_9ROSI) AT1G68960 Solyc05g010550.1 0 0 0 0 0 0 0 0 1 0 0 0 0 3 0 Unknown protein Solyc05g010555.1 23 7 58 0 0 0 0 0 7 10 7 4 30 22 3 Unknown protein Solyc05g010570.3 951 814 878 817 911 877 895 739 839 790 798 766 936 745 865 Transcription initiation factor TFIID subunit 11 (AHRD V3.3 *** A0A2G2ZHA0_CAPAN) AT4G20280 Solyc05g010560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g150107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BnaA02g27450D protein (AHRD V3.3 -** A0A078I6H0_BRANA) Solyc05g010590.4 618 682 768 705 491 712 767 448 958 616 913 737 653 737 872 WPP domain-interacting tail-anchored protein 2 (AHRD V3.3 *** A0A1J3HWE7_NOCCA) AT1G68910 Solyc05g010600.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g010610.3 1146 1084 1617 1408 1563 1849 1816 1662 1305 1040 1448 1288 1162 1205 1069 bHLH transcription factor 039 AT1G68920 Solyc05g010620.3 76 61 13 28 22 36 34 41 50 32 35 37 41 55 23 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q0T0_9MAGN) Solyc05g010630.4 7 34 23 21 18 9 21 10 62 30 8 16 32 9 3 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2U1PSN8_ARTAN) Solyc05g010640.3 0 15 7 4 0 1 11 9 42 14 2 10 3 3 22 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2U1PSN8_ARTAN) Solyc05g010650.3 23 3 20 11 3 14 7 7 24 14 16 23 13 12 1 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3BYD9_CAPCH) AT1G68940 Solyc05g010660.4 1262 1105 887 735 525 577 620 494 622 561 582 536 911 1054 898 DNA-directed RNA polymerase (AHRD V3.3 *** K4BXN8_SOLLC) AT1G68990 Solyc05g010670.3 4017 5804 3494 2672 3496 3699 3583 3699 3688 2585 2603 3453 5865 5391 3914 Heat shock protein (AHRD V3.3 *** O23638_ARATH) Solyc05g010680.2 10 162 92 132 179 175 156 162 149 53 151 67 81 153 69 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4J5H1_ARATH) Solyc05g010685.1 450 1000 773 1120 1137 1290 1058 1117 986 796 741 721 1690 1175 1061 Glycosyltransferase (AHRD V3.3 *** A0A077ERE3_ACTDE) Solyc05g010700.1 4 19 12 10 18 32 21 18 18 6 34 9 12 18 54 Unknown protein Solyc05g010710.3 36 48 33 46 64 80 62 43 55 37 53 42 19 27 64 UDP-glycosyltransferase 89A2-like (AHRD V3.3 *** A0A2I4HJA4_9ROSI) Solyc05g010720.4 15 7 24 15 3 12 8 4 20 7 31 21 23 16 16 Enoyl-CoA delta isomerase 1, peroxisomal (AHRD V3.3 *** A0A2G3B729_CAPCH) Solyc05g010725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g010730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (AHRD V3.3 *-* A0A2U1L212_ARTAN) Solyc05g010735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc05g010740.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein (AHRD V3.3 *** A0A2G3DEJ5_CAPCH) Solyc05g010750.3 1 4 3 1 0 1 0 2 5 2 1 1 2 3 0 Myosin heavy chain-related protein (AHRD V3.3 *-* A0A2U1NZH0_ARTAN) Solyc05g010755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) ATMG00240 Solyc05g010760.3 2 2 0 0 0 1 0 1 0 0 0 0 0 0 0 myosin heavy chain-like protein (AHRD V3.3 *-* AT4G31340.2) Solyc05g150108.1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G2W4T7_CAPBA) Solyc05g010770.4 86 48 90 71 51 62 44 37 57 28 138 62 65 73 104 Unknown protein Solyc05g010780.1 172 141 97 81 74 68 80 99 121 81 66 129 89 144 88 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1KIL8_ARTAN) AT1G13630 Solyc05g010790.3 91 131 81 157 77 34 95 68 79 111 23 100 54 121 63 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* AT1G13630.5) Solyc05g010800.3 0 1 1 1 0 0 0 0 1 1 3 3 0 0 2 3-methyladenine DNA glycosylase (AHRD V3.3 *** A0A1Y0KLG3_9PSED) AT1G13635 Solyc05g010810.1 5258 1984 1513 1694 1155 1109 1265 1272 1670 2025 1457 1433 1818 1843 2708 Phosphatidylinositol 4-kinase gamma 7 (AHRD V3.3 *** A0A2G2YCT0_CAPAN) AT2G03890 Solyc05g010813.1 314 97 52 59 44 70 42 82 129 142 83 88 73 98 112 Unknown protein Solyc05g010817.1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 Aminotransferase-like, plant mobile domain family protein (AHRD V3.3 *-* A0A0K9NPT3_ZOSMR) Solyc05g011810.4 728 708 696 752 642 626 715 670 658 559 727 584 746 738 724 bHLH transcription factor 040 Solyc05g011820.3 297 206 214 233 252 236 263 276 201 201 152 242 207 233 187 Oligopeptidase B (AHRD V3.3 *-* A0A2I0WXQ7_9ASPA) Solyc05g011825.2 0 2 0 1 0 2 1 0 0 0 0 1 4 1 0 Unknown protein Solyc05g011830.4 547 530 638 716 353 302 289 273 524 409 525 339 490 552 756 18S pre-ribosomal assembly protein gar2-like protein (AHRD V3.3 *-* AT2G03810.7) AT2G03810 Solyc05g011840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g011850.1 1 10 1 18 19 7 10 4 6 0 12 7 27 16 19 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y1_CAPCH) AT3G51210 Solyc05g011860.1 1 35 1 45 38 13 13 11 15 4 1 11 15 6 31 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) Solyc05g011870.1 0 2 7 0 0 0 2 1 8 1 0 2 0 7 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc05g011880.3 0 3 0 1 4 1 3 5 4 11 14 5 5 4 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A1P8BF18_ARATH) AT5G02230 Solyc05g011883.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc05g011887.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) Solyc05g011890.1 383 1438 131 1171 2980 2489 2492 2773 1846 1670 572 868 2390 552 268 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc05g011900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc05g011910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) Solyc05g011920.3 831 777 761 757 765 743 738 745 562 608 556 746 632 797 742 ACT domain-containing protein (AHRD V3.3 *** A0A1Q3CHJ6_CEPFO) AT1G69040 Solyc05g011930.4 1403 824 576 435 360 401 355 344 482 488 440 432 464 506 514 DnaJ domain-containing protein (AHRD V3.3 *-* A0A2U1P6I1_ARTAN) AT1G69060 Solyc05g011940.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8EYC2_CAPAN) Solyc05g011950.3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 DnaJ domain-containing protein (AHRD V3.3 *-* A0A2U1M6F5_ARTAN) Solyc05g011960.4 374 173 184 130 70 57 96 74 139 214 159 76 165 135 116 DnaJ domain-containing protein (AHRD V3.3 *-* A0A1Q3CHH1_CEPFO) Solyc05g011970.3 1203 548 1131 543 330 369 329 204 314 499 780 172 648 541 748 Cytochrome (AHRD V3.3 *** A0A1U8EZV2_CAPAN) Solyc05g011980.4 468 464 770 523 409 365 398 395 554 565 438 509 1250 698 643 Unknown protein Solyc05g011990.4 909 1245 1024 726 602 635 681 523 773 408 639 550 1267 1427 1036 nucleolar protein 14 (AHRD V3.3 *** A0A2I4EGH9_9ROSI) AT1G69070 Solyc05g012000.3 17 66 58 57 135 122 108 106 97 19 31 53 71 55 186 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** Q9LQB2_ARATH) AT1G69080 Solyc05g012010.3 102 100 102 113 69 50 80 40 62 43 73 46 152 134 155 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1QNZ5_ARTAN) Solyc05g056620.2 2702 1771 1689 1168 1094 1121 829 1068 1498 1552 899 1612 853 1342 922 macrocalyx AT1G69120 Solyc05g012020.4 42 21 35 63 43 33 55 36 30 15 55 34 54 17 39 ripening inhibitor AT2G03710 Solyc05g012030.1 37 67 14 73 97 70 63 68 68 27 6 26 70 54 47 protein BIG GRAIN 1-like E (AHRD V3.3 *** A0A2I4H8F0_9ROSI) AT1G69160 Solyc05g012040.4 532 302 419 293 254 265 321 297 272 423 346 236 388 335 277 Squamosa promoter binding protein 6b Solyc05g012050.4 216 231 20 167 0 5 1 2 3 28 0 2 9 19 13 CRABS CLAW b AT1G69180 Solyc05g012060.4 99 338 358 366 424 435 581 469 298 189 285 347 178 393 143 DNA binding protein (AHRD V3.3 *-* F4IE60_ARATH) AT1G26330 Solyc05g012070.3 1239 2389 2228 2071 2713 2391 2454 2371 3147 1838 2446 2110 3102 2801 2502 UDP-glucose:protein transglucosylase-like protein AT3G02230 Solyc05g012080.3 231 420 493 351 428 351 368 329 344 209 299 300 631 567 386 cytochrome b5 (AHRD V3.3 *** A0A2I4H8C1_9ROSI) AT1G26340 Solyc05g012090.4 171 263 269 266 271 299 264 258 266 172 207 231 368 350 230 Dihydropterin pyrophosphokinase-dihydropteroate synthase (AHRD V3.3 *** C5IXL4_SOLLC) AT4G30000 Solyc05g012100.3 575 732 756 528 655 672 598 584 670 383 562 655 707 764 736 Fructokinase-like protein 2 (AHRD V3.3 *** D9IWP0_NICBE) AT1G69200 Solyc05g012110.4 11865 3100 2898 3109 2235 2392 2321 1697 2071 5102 3210 2824 1649 2040 3436 6-phosphogluconolactonase (AHRD V3.3 *** B6U0H2_MAIZE) Solyc05g012120.3 97 103 113 114 144 117 102 113 139 127 103 114 182 163 163 Ribosome maturation factor RimP (AHRD V3.3 *** A0A2U1QL18_ARTAN) AT1G69210 Solyc05g012130.4 2765 1800 1571 1433 1393 1416 1564 1661 1628 2084 1496 1621 1369 1501 1463 Serine/threonine-protein kinase 4 (AHRD V3.3 *** A0A1U8ETU5_CAPAN) AT1G69220 Solyc05g012140.3 731 368 593 404 314 318 397 264 319 458 649 431 363 441 854 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A1U8ELM4_CAPAN) AT2G30100 Solyc05g012150.4 98 104 88 95 93 74 56 87 81 71 54 66 137 82 113 Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial (AHRD V3.3 *** A0A1U8EX28_CAPAN) AT2G03690 Solyc05g012160.3 4154 4167 5939 4519 5966 6174 5873 5848 5550 4710 6120 4985 4188 3988 5309 Protein SPIRAL1-like 2 (AHRD V3.3 *** A0A2G2YD05_CAPAN) AT1G26355 Solyc05g012170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g012172.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 182 (AHRD V3.3 -** XP_011080983.1) Solyc05g012173.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g012177.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g012180.3 11 9 0 7 0 0 0 0 3 0 5 0 26 41 1 Methyl esterase 11 (AHRD V3.3 *** A0A2U1LRP6_ARTAN) Solyc05g012190.3 696 723 722 588 580 651 615 588 469 495 497 678 820 976 775 Cell division control protein 48-like protein B (AHRD V3.3 *** A0A2G2VL01_CAPBA) AT2G03670 Solyc05g012200.3 1337 926 707 560 359 446 492 312 448 364 592 440 927 914 1047 Asparagine synthase family protein (AHRD V3.3 *** A0A2U1NH55_ARTAN) AT2G03667 Solyc05g012210.4 2050 1217 1162 1252 1352 1739 1503 1066 1160 1137 1442 1050 1473 1439 3834 Ninja-family protein AFP3 (AHRD V3.3 *** A0A2G3CFM6_CAPCH) AT1G69260 Solyc05g012220.3 263 198 198 200 210 249 263 220 290 199 198 227 206 195 256 Magnesium transporter MRS2-B (AHRD V3.3 *** A0A2G2VKY7_CAPBA) AT2G03620 Solyc05g012230.4 187 145 62 145 3 22 21 11 51 22 21 6 46 5 50 hypothetical protein (AHRD V3.3 *-* AT5G61040.1) Solyc05g012240.3 19 95 135 70 51 52 49 87 75 74 80 52 80 85 75 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 --* AT2G03640.5) Solyc05g012250.3 457 345 357 349 184 295 337 205 266 194 265 240 322 402 372 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3B755_CAPCH) AT1G80150 Solyc05g012260.3 794 757 674 653 797 792 712 825 956 864 903 810 971 951 936 Purple acid phosphatase (AHRD V3.3 *** A0A1U8EXF4_CAPAN) AT1G13750 Solyc05g012270.3 450 888 780 740 774 733 743 1017 892 502 507 734 1215 995 612 Argininosuccinate synthase (AHRD V3.3 *** A0A1U8EP46_CAPAN) AT4G24830 Solyc05g012280.3 8 72 87 69 118 91 89 114 124 35 49 65 38 51 52 wall-associated receptor kinase-like 1 (AHRD V3.3 *** A0A2I4H883_9ROSI) Solyc05g012290.3 1421 1086 1180 1093 831 1057 912 795 893 1460 1222 918 1185 930 1182 Protein root UVB sensitive 3 (AHRD V3.3 *** A0A2G2VKX6_CAPBA) AT1G13770 Solyc05g012300.1 116 150 151 148 121 167 157 95 90 85 85 106 148 151 143 WD40 repeat (AHRD V3.3 *** A0A200RAX0_9MAGN) AT5G63010 Solyc05g012310.4 922 507 501 740 436 566 589 427 536 590 647 532 424 470 722 Ureide permease (AHRD V3.3 *** A0A2R6PBP7_ACTCH) AT2G03530 Solyc05g012320.1 1 9 3 13 27 13 18 21 7 4 24 5 14 10 6 WD40 repeat (AHRD V3.3 *** A0A200RAX0_9MAGN) AT5G63010 Solyc05g012325.1 843 461 456 772 394 480 364 348 347 675 412 404 494 285 339 Ureide permease (AHRD V3.3 *** A0A2R6PBP7_ACTCH) Solyc05g012340.4 371 730 707 865 1013 928 929 896 784 709 845 795 814 791 698 Erlin-2 (AHRD V3.3 *** A0A2G2YD74_CAPAN) AT2G03510 Solyc05g012350.4 11 13 31 37 14 16 22 23 13 16 78 24 22 39 34 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q6NL07_ARATH) Solyc05g012360.3 8 84 67 92 141 162 201 156 73 48 70 100 74 118 59 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q6NL07_ARATH) AT1G13820 Solyc05g012370.3 314 251 346 252 365 296 347 301 204 190 378 206 183 240 355 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q6NL07_ARATH) AT1G13820 Solyc05g012380.3 2308 4232 4344 4536 7722 7556 6886 8167 4391 3320 4688 5067 2840 3479 3353 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* A0A1P8AME0_ARATH) AT1G13830 Solyc05g012390.4 1482 2239 1580 1575 1647 1502 1498 1643 1491 1314 1219 1825 2505 2269 1691 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R866_9MAGN) AT1G26460 Solyc05g012400.4 845 493 482 482 344 458 402 336 415 374 525 394 655 585 587 Chromatin modification-related protein Eaf7/MRGBP (AHRD V3.3 *** A0A2U1PNN2_ARTAN) AT1G26470 Solyc05g012410.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chromatin modification-related protein Eaf7/MRGBP (AHRD V3.3 *** A0A2U1PNN2_ARTAN) Solyc05g012420.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14-3-3 protein (AHRD V3.3 *** A0A200R871_9MAGN) AT1G26480 Solyc05g012430.1 130 93 118 41 0 0 0 1 26 211 152 9 323 141 37 Leucine-rich repeat receptor-like protein kinase PXL1 (AHRD V3.3 *-* PXL1_ARATH) Solyc05g012440.4 303 342 379 308 326 353 377 335 320 284 381 345 357 336 245 Cytochrome c oxidase assembly protein (AHRD V3.3 *** A8JCS0_CHLRE) AT1G02410 Solyc05g012450.4 361 737 744 841 686 810 875 700 1050 613 756 631 584 752 757 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A2U1PA46_ARTAN) Solyc05g012460.4 410 395 325 321 421 354 358 403 446 366 318 420 400 448 422 COBW domain-containing protein (AHRD V3.3 *** A0A2K3MUA2_TRIPR) AT1G26520 Solyc05g012480.4 691 1387 1029 1874 1732 1617 1872 1945 1669 1479 1199 1345 1333 1312 975 Mitochondrial processing peptidase (AHRD V3.3 *** Q41445_SOLTU) Solyc05g012490.2 3 14 11 5 4 18 8 16 2 2 8 10 16 3 0 C2H2-like zinc finger protein (AHRD V3.3 *-* A0A2U1QL40_ARTAN) Solyc05g012500.3 459 283 402 426 135 183 134 151 279 350 443 238 259 276 327 WRKY transcription factor 57 AT1G69310 Solyc05g012510.3 1290 2088 2411 2596 2155 2181 2370 2196 5488 2525 2366 3939 2690 2887 3510 Alpha-1,4 glucan phosphorylase (AHRD V3.3 *** A0A2G2VL62_CAPBA) Solyc05g012520.3 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 SNAP25-like protein (AHRD V3.3 *** A0A2K3PB77_TRIPR) Solyc05g012530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g012540.4 0 0 0 3 0 2 0 3 0 4 0 0 0 1 8 Heparanase-like protein 3 (AHRD V3.3 *** B4FGA1_MAIZE) Solyc05g012550.4 114 61 134 149 155 92 83 48 126 87 249 71 79 135 335 remorin isoform X2 (AHRD V3.3 *** A0A2I4DZD7_9ROSI) Solyc05g012560.3 897 516 703 693 373 385 375 296 367 660 581 558 578 551 698 ripening regulated protein (DDTFR7) Solyc05g012570.3 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 protein qua-1 isoform X1 (AHRD V3.3 *** XP_010321178.1) Solyc05g012580.1 0 0 0 1 1 3 0 2 0 1 2 10 0 0 9 Unknown protein Solyc05g012590.4 598 722 1658 1420 416 451 488 375 531 552 532 584 765 831 709 Ankyrin repeat (AHRD V3.3 *** A0A200PR78_9MAGN) AT2G03430 Solyc05g012600.3 137 237 202 318 291 310 309 269 277 159 333 251 266 277 512 hypothetical protein (AHRD V3.3 *** AT2G03420.1) AT2G03420 Solyc05g012610.3 1057 892 1579 1487 1357 1496 1533 1069 1150 1078 1450 1061 1018 1216 1973 Appr-1-p processing enzyme family protein (AHRD V3.3 *** A0A2U1M8F6_ARTAN) AT1G69340 Solyc05g012620.4 417 491 512 568 745 625 659 558 559 532 513 475 492 478 597 uvrB/uvrC motif-containing protein (AHRD V3.3 *** AT2G03390.4) AT2G03390 Solyc05g012630.2 26 32 36 30 3 20 17 25 22 9 25 34 28 31 34 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PRA0_9MAGN) AT1G69350 Solyc05g012640.3 542 578 630 642 565 726 688 651 750 586 658 521 565 614 621 T-box transcription factor%2C putative (DUF863) (AHRD V3.3 *-* AT1G13940.2) AT1G69360 Solyc05g012650.4 644 524 589 640 514 644 635 505 525 443 640 418 531 597 746 DUF863 domain-containing protein (AHRD V3.3 *** A0A1Q3C321_CEPFO) AT1G69360 Solyc05g012660.3 0 3 0 0 0 0 0 0 1 0 0 0 2 19 8 Glycosyltransferase (AHRD V3.3 *** F4ISB4_ARATH) AT2G03360 Solyc05g012670.2 29 35 94 112 198 121 112 122 62 25 77 67 57 51 25 Glycosyltransferase (AHRD V3.3 *** A0A288W8G2_GARJA) Solyc05g012680.3 41 253 389 276 369 320 308 337 359 124 302 268 251 274 214 DUF538 family protein (Protein of unknown function%2C DUF538) (AHRD V3.3 *** AT2G03350.1) Solyc05g012690.4 315 307 243 251 238 271 250 219 254 184 255 181 263 308 365 Sporulation protein RMD1 (AHRD V3.3 *** A0A1J3H8X5_NOCCA) AT1G69380 Solyc05g012700.3 794 556 654 641 622 698 629 628 685 610 572 680 370 489 685 Integral membrane protein (AHRD V3.3 *** B6U4H9_MAIZE) AT1G28140 Solyc05g012710.4 269 322 422 291 394 331 322 385 333 365 309 390 328 342 277 Cell division topological specificity factor-like protein, chloroplastic (AHRD V3.3 *** A0A1U8EX02_CAPAN) AT1G69390 Solyc05g012720.3 30 151 170 216 272 225 284 227 156 83 142 210 106 206 95 mitotic checkpoint protein BUB3.3 (AHRD V3.3 *** A0A2I4FXI7_9ROSI) Solyc05g012730.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Exostosin-like (AHRD V3.3 *** A0A200QGS1_9MAGN) Solyc05g012740.2 2 0 0 1 1 0 1 7 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc05g012745.1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 Late blight resistance protein R1-A (AHRD V3.3 *-* A0A2G2VIK4_CAPBA) Solyc05g012760.3 0 0 0 0 3 0 0 2 0 0 0 0 0 0 0 Unknown protein Solyc05g012770.3 979 775 687 525 393 374 367 446 655 1080 722 481 1396 728 609 WRKY transcription factor 4 AT1G13960 Solyc05g012780.4 60 21 31 55 9 9 2 1 6 13 20 12 20 33 93 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A1J3E5X3_NOCCA) Solyc05g012790.4 536 1723 2061 2354 2721 3031 3033 2875 2360 1580 2309 2319 1276 1693 1618 S-acyltransferase (AHRD V3.3 *** A0A2G2VL69_CAPBA) AT1G69420 Solyc05g012800.1 104 179 148 202 289 362 250 255 195 131 175 212 176 195 189 UDP-N-acetylmuramoylalanine--D-glutamate ligase (AHRD V3.3 *** A0A2T4YR12_9SPHN) Solyc05g150109.1 11 1 26 12 5 19 11 8 5 2 12 2 6 8 25 Unknown protein Solyc05g012810.3 141 44 2 38 2 7 3 12 13 14 44 11 7 15 1 Unknown protein Solyc05g012820.2 51 23 2 4 10 1 0 1 5 6 2 14 5 9 9 transmembrane protein (AHRD V3.3 *-* AT3G11810.1) Solyc05g150110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g012827.1 159 75 66 84 50 65 62 46 58 54 71 44 38 81 88 Unknown protein Solyc05g012840.1 0 0 0 1 0 0 0 0 1 0 0 1 1 0 2 TCP transcription factor 1 (AHRD V3.3 *** G3BGU2_SOLLC) Solyc05g012850.3 133 43 29 12 1 0 0 1 7 16 16 0 31 32 23 transmembrane protein (AHRD V3.3 *-* AT3G11810.1) Solyc05g012860.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BnaCnng59280D protein (AHRD V3.3 *** A0A078JSW2_BRANA) Solyc05g012870.1 1 11 39 11 34 36 24 12 22 11 29 7 19 16 7 Son of sevenless protein (AHRD V3.3 *** Q9C794_ARATH) AT1G69430 Solyc05g012880.2 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc05g012890.1 149 105 117 103 61 67 98 130 161 238 119 150 65 96 39 Late blight resistance protein R1-A (AHRD V3.3 *-* A0A2G2VV43_CAPBA) Solyc05g012900.4 12 16 27 24 16 26 16 12 11 26 58 14 16 18 21 JJH-R-like protein Solyc05g012910.4 7 1 0 3 7 11 2 4 4 6 5 14 2 6 6 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN) Solyc05g012920.3 533 412 314 309 226 241 265 205 274 208 260 230 385 411 466 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1PEF4_ARTAN) AT2G26790 Solyc05g012930.4 266 286 327 335 360 372 343 238 252 209 315 302 462 330 357 protein UXT homolog isoform X2 (AHRD V3.3 *-* XP_025886870.1) Solyc05g012940.4 103 206 162 127 199 176 204 218 142 109 106 148 232 207 112 ribonuclease H2 subunit B (AHRD V3.3 *** A0A2I4GNZ0_9ROSI) AT4G20325 Solyc05g012950.3 87 103 80 102 58 85 59 30 98 93 158 104 67 141 92 Sulfotransferase (AHRD V3.3 *-* A0A200QN29_9MAGN) Solyc05g012955.1 18 43 42 29 5 12 8 0 33 28 66 48 31 68 18 Sulfotransferase (AHRD V3.3 *** A0A2I4HG22_9ROSI) Solyc05g013000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B7J8_CAPCH) Solyc05g013005.1 6 0 0 0 0 0 0 0 0 3 0 0 0 2 0 Transposon, En/Spm-like, Transposase-associated domain protein (AHRD V3.3 *-* A0A2U1LYD3_ARTAN) Solyc05g013010.3 149 119 243 161 32 26 35 15 99 107 490 135 129 164 72 Sulfotransferase (AHRD V3.3 *** A0A2I4HG22_9ROSI) Solyc05g013020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Galactosyl transferase GMA12/MNN10 family protein (AHRD V3.3 *** A0A2U1L978_ARTAN) Solyc05g013030.1 2994 3701 2870 2920 3314 2881 2489 3780 3246 3397 2082 3364 3901 3239 2186 26S proteasome non-ATPase regulatory subunit 11 (AHRD V3.3 *** A0A1U8HB46_CAPAN) AT1G29150 Solyc05g013040.3 804 745 823 592 773 818 754 778 820 922 645 736 740 808 696 ARF guanine-nucleotide exchange factor GNOM (AHRD V3.3 *** A0A1U8HBB7_CAPAN) AT1G13980 Solyc05g013050.3 287 230 235 231 288 226 280 250 300 290 211 288 330 251 334 Vesicle transport v-SNARE protein (AHRD V3.3 *** A0A0K0XR08_TOBAC) AT1G26670 Solyc05g013060.4 87 61 59 43 21 19 25 32 38 64 44 31 71 50 34 plant/protein (AHRD V3.3 *-* AT1G13990.1) Solyc05g013070.3 1932 1843 2125 1867 1748 1788 1875 1698 1998 2346 2423 1583 2911 2025 1754 Protein kinase domain (AHRD V3.3 *** A0A200QP76_9MAGN) AT1G14000 Solyc05g013080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* Q9MUA6_9SOLN) Solyc05g013090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* Q9MUB7_9SOLN) Solyc05g013100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* J7H711_CAPAN) Solyc05g013110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-plastoquinone oxidoreductase subunit 5 (chloroplast) (AHRD V3.3 --* YP_004769859.1) Solyc05g013130.3 213 280 274 305 304 254 246 324 288 298 213 279 388 245 330 Transmembrane emp24 domain-containing protein p24delta9 (AHRD V3.3 *** A0A2G2YDC2_CAPAN) AT1G26690 Solyc05g013140.4 208 285 271 277 270 292 225 200 200 186 290 180 235 275 243 O-fucosyltransferase (AHRD V3.3 *** A0A2P5G0B7_TREOI) AT1G14020 Solyc05g013150.4 127 311 239 319 446 484 599 401 325 247 273 241 171 188 273 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like (AHRD V3.3 *** A0A2G2YDB5_CAPAN) Solyc05g013160.4 401 477 424 514 654 700 601 502 508 332 431 499 348 393 457 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic (AHRD V3.3 *** A0A1S3YNP9_TOBAC) AT1G14030 Solyc05g013170.2 139 215 224 143 115 135 119 90 156 78 119 87 297 200 255 GCK domain-containing protein (AHRD V3.3 *-* A0A1Q3BWH3_CEPFO) AT1G14060 Solyc05g013180.4 82 139 158 168 105 108 150 59 75 83 86 52 121 108 299 Phosphate transporter PHO1-like protein 10 (AHRD V3.3 *** A0A2G2YDB9_CAPAN) Solyc05g013190.4 180 240 225 213 281 316 302 255 194 218 192 233 221 274 221 Ribosomal L32p protein family (AHRD V3.3 *-* Q5Q0D8_ARATH) AT1G26740 Solyc05g013200.1 119 92 86 95 72 80 121 120 135 80 116 120 57 119 54 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2YDB1_CAPAN) AT2G02980 Solyc05g013210.3 185 160 254 205 169 199 221 121 145 133 210 140 144 227 220 Ribonuclease (AHRD V3.3 *** Q4ADQ2_9CARY) Solyc05g013220.2 589 1523 2533 1896 1236 1475 1225 1193 2141 1064 2897 1458 1208 1707 1234 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G2VLA8_CAPBA) Solyc05g013225.1 2 0 0 1 0 0 1 0 0 0 0 0 0 0 6 F-box protein (AHRD V3.3 --* A0A2K3MFK0_TRIPR) Solyc05g013240.4 213 281 392 415 454 388 526 371 386 372 388 332 345 292 321 DUF538 family protein%2C putative (Protein of unknown function%2C DUF538) (AHRD V3.3 *** AT1G55265.1) AT1G55265 Solyc05g013250.3 74 65 76 164 103 163 151 141 129 102 113 122 108 97 115 Late blight resistance protein R1-A (AHRD V3.3 *-* A0A2G2Y9J2_CAPAN) Solyc05g013260.3 56 132 152 157 169 186 172 207 181 123 111 158 79 133 159 PRF (AHRD V3.3 *-* Q96485_SOLLC) Solyc05g013270.2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 LescPth4 (AHRD V3.3 *** Q9LLD1_SOLLC) Solyc05g013280.4 1055 853 814 693 526 640 611 586 729 798 726 559 794 904 946 Pseudomonas resistance Solyc05g013290.2 287 199 253 252 323 284 232 303 293 294 295 202 223 199 234 Fenthion sensitivity Solyc05g013300.1 991 283 441 369 317 395 416 214 233 323 488 213 193 286 444 Pseudomonas syringae pv tomato resis. Solyc05g013310.1 577 223 200 203 157 156 243 156 186 193 221 153 104 177 275 Protein kinase (AHRD V3.3 *-* Q40234_SOLPI) Solyc05g013320.1 355 165 222 216 216 204 235 171 216 210 132 156 159 179 241 Protein kinase (AHRD V3.3 *** Q40234_SOLPI) Solyc05g013330.4 29 22 61 46 87 106 93 66 36 40 42 46 59 37 69 Unknown protein Solyc05g013340.3 1829 1665 1730 1654 1868 1994 2166 1689 1607 1553 1751 1417 1901 1705 1851 AP-1 complex subunit mu-1 (AHRD V3.3 *** A0A2G3C8S0_CAPCH) AT1G60780 Solyc05g013350.4 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4BY56_SOLLC) Solyc05g013360.3 5 37 25 20 18 46 36 29 20 18 24 23 12 35 1 protein POOR HOMOLOGOUS SYNAPSIS 1 (AHRD V3.3 *** A0A2I4DDJ4_9ROSI) AT1G10710 Solyc05g013370.1 15 5 0 8 1 0 0 0 1 0 1 0 3 1 13 MADS-box protein (AHRD V3.3 *-* F6M3U9_BETPL) Solyc05g013380.3 2657 2821 1205 1709 1987 1756 1659 2311 2667 3124 1085 2129 2549 1408 1618 Alanine aminotransferase 2 (AHRD V3.3 *** B6TXZ8_MAIZE) AT1G70580 Solyc05g013390.1 172 90 162 140 81 127 147 66 69 67 134 66 63 88 150 Unknown protein Solyc05g013400.4 363 228 243 227 208 278 307 288 284 233 162 245 167 250 266 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R9A2_9MAGN) AT5G57250 Solyc05g013410.3 220 160 642 225 169 119 101 114 136 475 542 215 166 165 207 F-box protein (AHRD V3.3 *** A0A2G2VNJ4_CAPBA) AT1G70590 Solyc05g013420.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Transcription factor DIVARICATA (AHRD V3.3 *-* A0A2G3BNV9_CAPCH) Solyc05g013430.1 0 0 0 0 0 0 0 0 0 2 2 0 2 0 0 MYB-related transcription factor (AHRD V3.3 *-* B4FK82_MAIZE) Solyc05g013440.3 5204 4668 2567 3800 2551 2667 2521 3094 6021 7590 5565 7715 5131 4588 2288 Amine oxidase (AHRD V3.3 *** A0A2G2VMP6_CAPBA) Solyc05g013450.4 85 323 146 152 227 283 289 331 311 139 170 277 295 195 86 Protein DETOXIFICATION (AHRD V3.3 *** A0A1Q3CW99_CEPFO) AT1G12950 Solyc05g013460.4 418 691 436 599 721 619 647 648 948 776 619 699 724 576 621 Protein DETOXIFICATION (AHRD V3.3 *** A0A1Q3CW99_CEPFO) Solyc05g013470.4 2 0 5 2 32 23 21 37 1 2 1 4 0 1 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4EHX0_9ROSI) Solyc05g013480.4 717 486 530 395 282 304 354 217 492 439 573 450 521 456 577 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT3G26580.1) AT3G26580 Solyc05g013490.4 2996 3050 2319 2539 2735 2456 2702 3241 2424 2914 2072 2579 2127 2714 2255 Formin-like protein 3 (AHRD V3.3 *-* A0A142CD24_9LAMI) Solyc05g013500.4 69 128 237 202 170 230 303 190 138 82 153 170 139 170 186 Nucleotide-diphospho-sugar transferase family protein (AHRD V3.3 *** A0A2U1N9Q9_ARTAN) AT1G70630 Solyc05g013510.4 944 2084 836 1504 2573 2619 2662 2539 1952 1636 977 2121 1542 968 731 Phosphate transporter (AHRD V3.3 *** Q6J2Q8_SOLTU) AT3G26570 Solyc05g013530.4 758 285 204 366 75 51 52 12 250 356 344 133 379 328 1046 Octicosapeptide/phox/Bem1p domain kinase superfamily protein (AHRD V3.3 *-* A0A2K3NXA6_TRIPR) AT1G70640 Solyc05g013535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc05g013540.1 267 394 787 473 561 577 373 635 653 663 696 914 238 479 180 LEAFLESS AT1G12980 Solyc05g013560.3 101 130 264 178 130 136 176 102 159 100 132 62 249 177 417 Serine-rich protein-like protein (AHRD V3.3 *-* Q9FKU6_ARATH) AT1G67910 Solyc05g013570.3 636 579 391 484 645 538 594 510 600 240 558 313 512 552 836 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2VN16_CAPBA) AT1G67900 Solyc05g013580.4 249 186 193 189 197 243 204 232 195 183 203 243 246 178 252 Beta-1,4-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2U1NH94_ARTAN) Solyc05g013590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease SBT3.5 (AHRD V3.3 *** A0A2G3C9K1_CAPCH) Solyc05g013600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease-like protein (AHRD V3.3 *-* A0A2K3LZL2_TRIPR) Solyc05g013610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *-* A0A2G2X2I0_CAPBA) Solyc05g013613.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N056_TRIPR) Solyc05g013617.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc05g013620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein kreg-1 (AHRD V3.3 --* XP_004239134.1) Solyc05g013630.1 144 50 78 117 1 3 0 0 21 29 53 8 40 52 154 protein kreg-1 (AHRD V3.3 *** XP_004239134.1) Solyc05g013640.1 503 588 632 720 334 237 229 174 346 456 386 187 1649 753 1200 Unknown protein Solyc05g013650.2 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 Lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** A0A1P8AMP7_ARATH) Solyc05g013660.4 544 291 284 240 216 198 141 204 216 286 263 212 498 373 259 Lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** A0A1P8AMP7_ARATH) Solyc05g013670.3 659 538 618 609 597 801 719 605 555 619 632 573 394 527 810 Chloroplast sensor kinase, chloroplastic (AHRD V3.3 *** A0A2G3B906_CAPCH) AT1G67840 Solyc05g013680.3 10 33 25 82 18 24 33 29 54 31 7 63 86 82 32 Gdsl esterase/lipase (AHRD V3.3 *** A0A2P4H5E8_QUESU) AT3G26430 Solyc05g013690.4 298 1035 549 557 977 776 694 960 903 754 354 587 1116 599 469 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6REU1_ACTCH) Solyc05g013700.4 2057 2183 1880 1622 2050 2095 1922 2247 2134 1751 1871 2028 2096 1980 1774 Plant specific eukaryotic initiation factor 4B (AHRD V3.3 *** A0A1R3GQ54_COCAP) AT1G13020 Solyc05g013710.3 32 32 14 43 37 50 47 55 43 52 43 73 36 49 15 SufE-like protein chloroplastic-like (AHRD V3.3 *** A0A2K3NC77_TRIPR) AT1G67810 Solyc05g013720.3 982 614 443 596 550 687 623 666 820 696 555 672 591 599 801 Alpha-galactosidase (AHRD V3.3 *** A0A2G3B902_CAPCH) AT3G26380 Solyc05g013730.3 933 916 1046 933 1052 955 1016 1055 1089 1056 1198 980 1021 963 890 O-fucosyltransferase (AHRD V3.3 *** A0A2P5FMT7_TREOI) AT3G26370 Solyc05g013740.3 3337 2261 1939 1534 1592 1699 1622 1850 1873 1653 1624 1886 2008 2155 1945 Coilin-like protein (AHRD V3.3 *-* U6BQ51_NICBE) Solyc05g013750.3 1410 677 925 833 456 459 519 488 495 925 1018 624 478 864 850 Protein-tyrosine-phosphatase MKP1 (AHRD V3.3 *** A0A2G3B907_CAPCH) Solyc05g013760.4 33 42 90 112 61 88 68 41 32 71 59 30 33 60 42 Proline-rich receptor-like kinase (AHRD V3.3 *-* A0A1I9LPJ0_ARATH) AT3G26350 Solyc05g013770.4 983 960 1039 894 815 1078 1042 762 879 759 888 814 955 949 1092 PK12 protein kinase (AHRD V3.3 *** O49967_TOBAC) Solyc05g013780.3 1261 1031 1196 1161 1046 1149 1121 985 1214 810 1092 950 1129 1033 1057 paramyosin (AHRD V3.3 *** AT1G24560.1) AT1G24560 Solyc05g013800.1 577 439 433 426 382 387 381 408 405 333 394 358 451 444 441 Unknown protein Solyc05g013810.4 332 208 174 166 57 84 59 83 159 225 425 73 102 190 317 Cellulase (Glycosyl hydrolase family 5) protein (AHRD V3.3 *-* A0A1I9LMY2_ARATH) Solyc05g013820.4 2541 3353 2376 2360 3411 2648 2704 3670 2874 2778 1938 3035 4298 3061 2107 Proteasome subunit beta (AHRD V3.3 *** A0A2G2VMP0_CAPBA) AT3G27430 Solyc05g013830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g013840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g013843.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g013847.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc05g013850.2 785 1307 1825 1735 1295 1300 1008 840 1545 1692 2291 919 995 1205 1705 Sieve element occlusion b (AHRD V3.3 *** E2FKJ9_9SOLN) AT3G01680 Solyc05g013860.4 19 159 95 79 274 239 274 242 83 64 142 76 56 73 43 Sieve element occlusion (AHRD V3.3 *** A0A200RCY5_9MAGN) AT1G67790 Solyc05g013870.4 409 696 822 694 662 600 510 372 786 784 1033 576 469 635 1052 Sieve element occlusion b (AHRD V3.3 *** E2FKJ9_9SOLN) Solyc05g013890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter (AHRD V3.3 *-* A0A200R4I7_9MAGN) Solyc05g013900.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter (AHRD V3.3 *-* A0A200RCU2_9MAGN) Solyc05g013905.1 108 203 269 175 296 225 268 225 253 185 263 215 343 265 251 hypothetical protein (AHRD V3.3 *-* AT1G67785.1) Solyc05g013920.4 12 21 6 4 3 2 9 8 17 5 3 11 14 8 7 Cysteine protease CP8 (AHRD V3.3 *** T2BRU3_TOBAC) Solyc05g013930.2 813 441 359 410 990 827 708 1076 450 794 574 822 275 368 140 Protein terminal ear1-like protein (AHRD V3.3 *** A0A2G3B8W0_CAPCH) AT3G26120 Solyc05g013940.4 647 647 549 809 643 635 669 580 525 528 429 432 628 730 600 Actin-related protein (AHRD V3.3 *** A0A200RCU3_9MAGN) AT1G13180 Solyc05g013950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *-* A0A200PZB1_9MAGN) Solyc05g013960.3 419 1179 1219 1312 1598 1999 1846 1831 1738 871 1234 1389 1068 1370 1029 Oxysterol-binding protein (AHRD V3.3 *** A0A200RCU6_9MAGN) AT1G13170 Solyc05g013970.4 462 250 199 179 106 126 83 78 159 198 279 133 306 260 304 RNA recognition motif domain (AHRD V3.3 *-* A0A200R4F7_9MAGN) AT1G13190 Solyc05g013980.3 8 5 29 0 12 8 4 4 2 0 9 0 1 0 0 anther-specific protein BCP1-like (AHRD V3.3 -** XP_022855050.1) Solyc05g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g013990.3 2951 5806 5041 3765 4987 4599 4805 5926 4209 3329 2992 4524 7237 6344 4609 T-complex protein 1 subunit epsilon (AHRD V3.3 *** A0A1U8GBL8_CAPAN) AT1G24510 Solyc05g014000.4 69 214 205 920 362 266 238 377 412 792 305 336 317 293 915 Pectate lyase (AHRD V3.3 *** A0A2G3B8Z4_CAPCH) AT1G67750 Solyc05g014030.3 1768 897 1380 1516 1286 1311 1400 1070 1195 1592 1664 1072 886 1193 2296 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** Q9LU80_ARATH) AT3G26100 Solyc05g014040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 70 Solyc05g014050.3 1631 932 844 799 616 692 742 672 782 844 753 943 1109 1063 1278 ALBINO3-like protein 1, chloroplastic (AHRD V3.3 *** A0A2G2VMT2_CAPBA) AT1G24490 Solyc05g014051.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycine-rich domain-containing protein 2 (AHRD V3.3 *-* A0A2G2XCN7_CAPBA) Solyc05g014052.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g014054.1 0 5 0 3 0 0 1 0 0 1 0 1 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc05g014056.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Villin (AHRD V3.3 *-* A0A2P5EN25_TREOI) Solyc05g014058.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 villin-2-like (AHRD V3.3 *-* A0A1U8EBN1_CAPAN) Solyc05g014070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamate-rich WD repeat-containing protein 1 (AHRD V3.3 *-* A0A2U1MP05_ARTAN) Solyc05g014080.3 1 0 1 1 0 1 2 0 1 0 0 0 2 0 3 ACT domain repeat 3 (AHRD V3.3 *-* A0A2U1PRQ7_ARTAN) Solyc05g014090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1NGX5_ARTAN) Solyc05g014100.3 579 495 272 351 359 354 363 441 461 393 200 410 316 473 326 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* A0A1I9LMK9_ARATH) Solyc05g014110.3 1421 918 1401 1348 986 1124 1322 726 758 687 1319 834 951 1132 1916 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1Q7Z2_ARTAN) Solyc05g014120.1 5 8 16 18 7 6 2 1 6 5 46 24 3 6 16 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MVU3_ARTAN) AT1G24480 Solyc05g014130.3 535 551 619 324 281 264 387 231 360 227 278 279 444 517 553 COP1-interacting protein 4 (AHRD V3.3 *-* A0A1P8BDL0_ARATH) AT4G00930 Solyc05g014140.3 13 2 24 9 7 16 4 12 7 8 16 14 7 16 0 Very-long-chain 3-oxoacyl-CoA reductase-like protein (AHRD V3.3 *-* A0A2G2YFL7_CAPAN) Solyc05g014150.4 18 13 12 11 12 5 17 6 13 24 4 9 5 1 0 Very-long-chain 3-oxoacyl-CoA reductase-like protein (AHRD V3.3 *** A0A1J3EFG0_NOCCA) Solyc05g014160.4 699 328 374 388 322 376 332 246 369 336 401 267 414 433 527 Regulator of G-protein signaling 1 (AHRD V3.3 *** A0A1U8EL98_CAPAN) AT3G26090 Solyc05g014170.2 3 2 2 2 6 1 1 2 3 4 1 6 12 4 0 Unknown protein Solyc05g014175.1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 Unknown protein Solyc05g014177.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g014190.4 97 87 53 69 58 60 42 57 48 79 33 76 56 44 32 CAAX amino terminal protease family protein (AHRD V3.3 *** AT3G26085.2) AT3G26085 Solyc05g014200.3 530 613 466 486 664 679 686 812 912 664 458 755 497 551 632 TGN-localized SYP41-interacting protein (AHRD V3.3 *** F1BCU1_ARATH) AT1G24460 Solyc05g014210.4 0 2 6 4 0 4 2 1 1 1 6 4 0 0 5 GDSL esterase/lipase (AHRD V3.3 *-* A0A2R6P3D9_ACTCH) Solyc05g014220.1 6 1 0 0 0 0 0 0 3 0 1 2 0 0 0 Unknown protein Solyc05g014230.3 57 28 56 59 37 39 46 40 50 59 54 29 65 92 77 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NQ36_ARTAN) AT1G24440 Solyc05g014240.4 1551 1266 1247 1247 1639 1270 1347 1130 1036 928 1140 988 1571 1589 1894 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A2U1Q209_ARTAN) AT1G67720 Solyc05g014250.3 152 85 93 82 64 75 55 34 51 54 78 71 77 88 226 RING/U-box superfamily protein (AHRD V3.3 *** B6U862_MAIZE) Solyc05g014260.3 5037 1809 1443 1366 731 680 785 629 1972 1510 2223 1308 1693 1589 2629 Two-component response regulator (AHRD V3.3 *** A0A2G3B918_CAPCH) Solyc05g014270.4 64 411 349 438 960 761 816 924 479 226 403 611 49 216 175 TPX2 (Targeting protein for Xklp2) protein family (AHRD V3.3 *-* Q84JG6_ARATH) Solyc05g014275.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein (AHRD V3.3 *** A0A1Q3C897_CEPFO) Solyc05g014280.4 19 11 7 2 1 2 1 4 6 6 0 7 18 1 2 small heat shock protein 1 Solyc05g014290.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-related transcription factor (AHRD V3.3 *-* A8CCM9_TOBAC) AT5G14340 Solyc05g014300.1 133 46 29 12 0 0 1 3 8 113 50 4 52 32 14 Unknown protein Solyc05g014310.3 459 622 641 426 870 851 807 779 595 598 802 575 440 502 810 multidrug resistance protein (AHRD V3.3 *** AT1G67700.4) AT1G67700 Solyc05g014320.3 278 161 158 148 160 132 129 118 148 174 236 144 160 165 119 alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT3G27320.2) Solyc05g014330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) AT1G24430 Solyc05g014340.3 450 442 530 409 468 509 432 400 387 401 685 467 551 462 599 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *** A0A2G2VNN0_CAPBA) AT1G13460 Solyc05g014360.1 69 28 29 21 59 34 24 20 12 69 9 9 53 55 47 Unknown protein Solyc05g014370.3 85 431 413 488 988 860 825 990 443 221 367 556 195 278 343 Mitotic spindle checkpoint protein MAD2 (AHRD V3.3 *** A0A1U8ETB9_CAPAN) AT3G25980 Solyc05g014375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc05g014390.4 981 1309 2943 2219 884 913 809 777 1196 1433 1576 1231 1148 1523 1510 ABC transporter (AHRD V3.3 *-* A0A200RCP7_9MAGN) Solyc05g014400.4 778 843 853 631 861 883 1022 826 569 582 608 687 590 786 693 RecQ-mediated genome instability protein 1 (AHRD V3.3 *** A0A2G3BMT0_CAPCH) AT5G63540 Solyc05g014420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD40 repeat (AHRD V3.3 *-* A0A200QZN3_9MAGN) Solyc05g014460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD40 repeat (AHRD V3.3 *** A0A200QZN3_9MAGN) Solyc05g014470.3 3785 12045 8240 7890 12926 11648 11882 14040 10784 7985 5391 9363 13832 11413 8029 glyceraldehyde 3-phosphate dehydrogenase AT1G13440 Solyc05g014480.4 91 73 136 156 121 138 136 84 65 123 110 110 121 108 205 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *-* A0A078FNT0_BRANA) Solyc05g014490.3 358 258 258 204 252 257 217 247 273 245 160 218 234 309 178 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RCQ9_9MAGN) AT3G04130 Solyc05g014500.3 146 137 151 108 96 168 133 102 77 89 114 68 144 142 134 ABC transporter (AHRD V3.3 *-* A0A200RCP7_9MAGN) Solyc05g014505.1 31 22 18 21 15 17 22 1 11 19 22 38 6 18 23 Unknown protein Solyc05g014510.3 525 663 695 736 801 667 828 827 1179 822 925 701 565 528 634 Ankyrin repeat (AHRD V3.3 *** A0A200R4C9_9MAGN) Solyc05g014530.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Lysine histidine transporter 1 (AHRD V3.3 *** A0A1U8EY53_CAPAN) Solyc05g014540.3 161 903 1050 984 1192 1406 1386 1310 944 734 857 1151 818 1219 266 DNA polymerase alpha subunit B (AHRD V3.3 *** A0A2G3B930_CAPCH) AT1G67630 Solyc05g014550.1 40 7 24 38 0 5 1 2 2 33 27 2 3 11 26 TRAM/LAG1/CLN8-like domain-containing protein (AHRD V3.3 *-* A0A2U1PG06_ARTAN) Solyc05g014560.3 13 23 58 15 21 48 56 37 23 24 37 36 36 18 9 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic (AHRD V3.3 *** A0A2I0XGI5_9ASPA),Pfam:PF13561 AT1G24360 Solyc05g014570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor RADIALIS (AHRD V3.3 *** A0A2G2Y9U7_CAPAN) Solyc05g014580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g014590.3 3 5 3 0 0 0 0 0 5 38 30 3 4 107 1 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1MR86_ARTAN) AT5G57150 Solyc05g014600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g014620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g014630.2 38 24 60 22 21 30 32 26 10 22 32 33 30 40 37 Unknown protein Solyc05g014640.3 1149 1125 1240 1006 1063 1275 1235 1281 1455 1305 1112 1082 1012 1127 1012 Serine-rich adhesin for platelets-like protein (AHRD V3.3 *** A0A2K3PII5_TRIPR) AT1G27850 Solyc05g014650.2 193 225 359 249 206 248 231 177 149 154 239 192 352 347 318 Ribosomal silencing factor RsfS (AHRD V3.3 *-* A0A2G2XZV2_CAPAN) AT1G67620 Solyc05g014690.3 112 388 348 368 691 622 762 798 413 280 277 546 234 518 125 RNA helicase DEAH-box14 AT1G27880 Solyc05g014700.3 38 133 131 136 262 231 272 190 119 98 96 160 102 102 45 Acid phosphatase/vanadium-dependent haloperoxidase-related protein (AHRD V3.3 *** Q9FXC5_ARATH) AT1G67600 Solyc05g014710.4 376 1858 1813 1901 3924 3520 3548 3447 2601 696 1561 2348 1062 1431 831 Remorin (AHRD V3.3 *** A0A200QY51_9MAGN) AT1G67590 Solyc05g014720.4 127 243 339 259 286 399 455 378 175 221 237 239 217 312 339 DNA topoisomerase (AHRD V3.3 *-* A0A2G2YF91_CAPAN) Solyc05g014730.1 97 149 111 76 136 136 143 137 111 95 75 120 125 138 51 DNA topoisomerase (AHRD V3.3 *-* A0A2G2YF91_CAPAN) Solyc05g014740.1 24 42 6 34 40 31 38 55 31 33 8 46 26 14 25 DNA topoisomerase (AHRD V3.3 *-* A0A2G2YF91_CAPAN) Solyc05g014750.2 58 137 114 85 230 122 154 255 108 148 126 183 90 114 68 DNA topoisomerase (AHRD V3.3 *** A0A2G3B8Z8_CAPCH) Solyc05g014760.3 4820 3020 3296 2751 2178 2234 2233 2330 2884 3388 2668 2355 2416 2552 2610 Cyclin-dependent kinase G-2 (AHRD V3.3 *** A0A2G3B8V1_CAPCH) AT1G67580 Solyc05g150112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g014790.3 3983 2497 2788 2652 2188 2079 2143 2208 3112 3985 2785 2831 2765 3223 3583 Lipoxygenase (AHRD V3.3 *** K4BYJ7_SOLLC) AT1G67560 Solyc05g014795.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g014800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A078GS30_BRANA) Solyc05g014810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A200QMF3_9MAGN) Solyc05g014820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A2K3NSE8_TRIPR) Solyc05g014830.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A1U8EPA3_CAPAN) Solyc05g014840.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A200QMF3_9MAGN) Solyc05g014843.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g014847.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A078GS30_BRANA) Solyc05g014860.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A1U8EPA3_CAPAN) Solyc05g014870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A078GS30_BRANA) Solyc05g014880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A2K3NSE8_TRIPR) Solyc05g014890.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A078GS30_BRANA) Solyc05g150113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A078GS30_BRANA) Solyc05g014900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 --* A0A200QWX4_9MAGN) Solyc05g014910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-related sequence 5-like (AHRD V3.3 *-* A0A2K3LNV6_TRIPR) Solyc05g014920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-related sequence 5-like (AHRD V3.3 *-* A0A2K3LK03_TRIPR) Solyc05g014930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 --* A0A2I0X1F3_9ASPA) Solyc05g014940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A2K3NSE8_TRIPR) Solyc05g014970.3 1306 973 1002 1097 710 722 967 670 918 725 1035 766 990 1239 1402 Urease (AHRD V3.3 *** Q93WI8_SOLTU) AT1G67550 Solyc05g014980.4 435 885 791 590 711 754 724 660 638 773 665 581 1549 973 708 Adenylate kinase (AHRD V3.3 *** A0A200R495_9MAGN),Pfam:PF00406 AT5G50370 Solyc05g015000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *-* A0A1Q3BUG5_CEPFO) Solyc05g015005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc05g015020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc05g015030.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc05g015040.4 706 608 397 528 534 521 505 516 484 480 459 473 386 543 641 RNA helicase DEAH-box 15 AT1G27900 Solyc05g015050.3 1067 994 946 1221 885 923 1103 990 1004 902 881 864 944 1094 1208 GPT1 (AHRD V3.3 *** A0A142CD30_9LAMI) AT3G01810 Solyc05g015060.4 0 5 5 3 8 4 3 5 9 1 0 7 2 2 1 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NGS8_ARTAN) Solyc05g015070.4 1221 715 1114 931 715 879 868 897 1116 1573 1353 1169 656 890 1086 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VMV0_CAPBA) AT1G24330 Solyc05g015075.1 2 3 26 11 3 0 2 2 23 15 9 15 4 5 12 Unknown protein Solyc05g015090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g150114.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g150115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 sentrin-specific protease 2-like isoform X1 (AHRD V3.3 *-* XP_024160256.1) Solyc05g015130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015150.3 212 329 482 688 491 593 658 361 660 405 751 555 436 537 501 Receptor protein kinase-like protein (AHRD V3.3 *** A0A2R6QRC2_ACTCH) AT1G67510 Solyc05g015160.3 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 Glucan endo-1,3-beta-glucosidase 5, putative, expressed (AHRD V3.3 *** Q852K4_ORYSJ) Solyc05g015170.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 glucan endo-1,3-beta-glucosidase 8 (AHRD V3.3 *** A0A2I4G7D6_9ROSI) Solyc05g015180.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like%2C plant mobile domain family protein (AHRD V3.3 --* AT2G04865.2) Solyc05g015210.4 756 585 516 521 560 662 673 712 633 645 496 538 570 629 637 transforming growth factor-beta receptor-associated protein 1 (AHRD V3.3 *-* A0A2I4GBN0_9ROSI) Solyc05g015220.3 784 1148 751 854 822 866 913 978 948 988 757 900 1392 1091 927 Mannosyl-oligosaccharide glucosidase GCS1 (AHRD V3.3 *** A0A2G3CQL2_CAPCH) AT1G67490 Solyc05g015230.1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015250.2 74 130 91 37 84 77 71 140 154 90 36 75 127 74 63 Mannosyl-oligosaccharide glucosidase GCS1 (AHRD V3.3 *-* A0A2G3AE44_CAPAN) Solyc05g015260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein SKIP11 (AHRD V3.3 *-* A0A2G2VLQ0_CAPBA) Solyc05g015290.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015300.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BURP-domain containing protein (AHRD V3.3 *** Q5ZFA0_PLAMJ) Solyc05g015310.3 1184 819 793 634 885 769 891 843 794 902 857 973 807 802 826 Small ribosomal subunit biogenesis GTPase RsgA (AHRD V3.3 *** B2J3J5_NOSP7) AT1G67440 Solyc05g015320.3 51 105 90 153 142 86 116 60 102 85 130 38 83 98 176 65-kDa microtubule-associated protein 8 (AHRD V3.3 *** A0A2G2YEW9_CAPAN),Pfam:PF03999 AT1G27920 Solyc05g015330.1 5 197 346 210 199 327 312 235 145 71 186 224 120 228 99 Nuclear transcription factor Y subunit C-4-like protein (AHRD V3.3 *** A0A2K3NUG6_TRIPR) AT5G43250 Solyc05g015350.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1PN82_ARTAN) Solyc05g015360.2 0 2 0 0 0 0 1 0 2 0 0 0 1 0 0 HORMA domain-containing protein (AHRD V3.3 *-* A0A2K3NRQ7_TRIPR) Solyc05g015370.3 12 7 1 0 1 2 5 2 3 1 0 1 10 0 4 DNA-binding HORMA (AHRD V3.3 *-* A0A200QG98_9MAGN) Solyc05g015380.2 8 2 0 6 1 3 3 2 6 2 9 5 8 4 0 DNA-binding HORMA (AHRD V3.3 *-* A0A200R484_9MAGN) Solyc05g015390.3 6212 2492 3106 2803 1572 1828 1655 1258 2989 3457 2833 3343 2602 2520 4270 REF/SRPP-like protein (AHRD V3.3 *** A0A2G2VMR3_CAPBA) AT1G67360 Solyc05g015410.4 67 28 5 25 10 21 14 7 32 16 35 35 16 32 51 Unknown protein Solyc05g015420.4 975 778 962 704 742 789 807 689 712 937 1004 673 768 642 921 F-box protein (AHRD V3.3 *** A0A2G2YF26_CAPAN) AT1G67340 Solyc05g015430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g150116.1 1164 418 698 297 262 216 224 206 251 698 736 460 246 412 736 Unknown protein Solyc05g015437.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc05g015460.3 25 3 0 0 2 0 0 0 2 3 0 1 0 0 0 F-box domain-containing protein (AHRD V3.3 *-* A0A2U1LCH7_ARTAN) Solyc05g015470.1 120 131 115 109 110 113 104 101 85 124 175 123 95 72 161 Chaperone protein dnaJ-like protein (AHRD V3.3 *** Q94CB5_ARATH) AT5G43260 Solyc05g015473.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015477.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015480.3 161 33 54 33 16 8 12 11 21 24 23 26 18 51 99 molybdenum cofactor sulfurase-like (AHRD V3.3 *** A0A2I4FYP1_9ROSI) Solyc05g015490.4 6628 3880 3577 6469 937 1537 1317 1476 2393 4220 4457 3059 3349 5541 5376 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain (AHRD V3.3 *** A0A200QGD6_9MAGN) AT1G27950 Solyc05g015493.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc05g015495.1 36 30 11 12 3 26 5 3 13 8 2 4 18 9 22 Glucuronoxylan 4-O-methyltransferase 1 (AHRD V3.3 *** A0A2G2VDV8_CAPBA) AT1G27930 Solyc05g015497.1 0 0 2 0 0 0 0 1 0 0 1 1 3 0 0 Glucuronoxylan 4-O-methyltransferase 1 (AHRD V3.3 *** A0A2G2VDV8_CAPBA) AT1G27930 Solyc05g015500.4 7598 4798 3170 2897 2446 2684 2339 2499 2798 3353 2980 3070 3323 3249 3836 RanBP2-type zinc finger protein (AHRD V3.3 *** A0A2G2YF90_CAPAN) AT1G67325 Solyc05g015510.3 1979 1134 1412 1239 1844 1642 1741 1419 1762 1783 1727 1553 1052 1280 1283 Squamosa promoter-binding protein 10 AT5G43270 Solyc05g015520.3 686 551 540 620 579 681 649 648 479 604 529 681 487 490 551 F-box family protein (AHRD V3.3 *** B8Y9B5_PONTR) AT1G27340 Solyc05g015530.3 672 654 773 702 748 809 777 648 529 821 833 774 1581 1078 966 Endoplasmic reticulum, stress-associated Ramp4 (AHRD V3.3 *** A0A2U1N8N8_ARTAN) AT1G27350 Solyc05g015532.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoribonuclease Dicer homolog 2 (AHRD V3.3 --* DCL2_ARATH) Solyc05g015534.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015536.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015538.1 6 6 14 18 4 17 7 16 15 8 8 8 7 13 0 Unknown protein Solyc05g015550.2 74 111 139 164 118 243 156 181 111 103 123 197 120 162 64 Nuclear transcription factor Y subunit B-9 (AHRD V3.3 *** A0A2G3AZ68_CAPCH) Solyc05g015555.1 21 24 13 27 19 18 6 9 15 12 16 23 8 30 32 Unknown protein Solyc05g015570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015580.1 19 2 6 5 9 5 2 2 2 8 2 13 9 0 18 Unknown protein Solyc05g015590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015610.3 4994 1804 1512 1602 926 925 989 824 1513 1997 1863 1025 1168 1941 2584 Histidine kinase 3 (AHRD V3.3 *** A0A1U8EVH0_CAPAN) AT1G27320 Solyc05g015630.3 393 481 588 606 681 639 661 557 341 396 560 465 638 576 639 nuclear transport factor 2-like (AHRD V3.3 *** A0A2I4G8G9_9ROSI) Solyc05g015640.3 974 505 321 615 537 570 463 574 491 817 514 409 928 314 548 transmembrane protein (AHRD V3.3 *-* AT1G27300.1) AT1G27300 Solyc05g015650.3 2295 1435 1020 1092 819 785 948 885 1214 1725 1304 1244 1226 1273 1272 Calmodulin-binding transcription activator 4 (AHRD V3.3 *** A0A2G2YFA1_CAPAN) AT1G67310 Solyc05g015651.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3IMG1_NOCCA) Solyc05g015652.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc05g015653.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NI85_TRIPR) Solyc05g015654.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3MPB2_TRIPR) Solyc05g150117.1 365 248 174 388 410 338 630 332 170 323 236 265 154 138 102 Unknown protein Solyc05g150118.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc05g015690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015700.1 0 0 0 3 0 0 0 0 0 0 0 0 0 1 1 Transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** Q9SMN3_ARATH) AT5G63500 Solyc05g015710.3 1822 783 1214 908 844 998 922 649 565 1277 1862 681 773 741 1275 transmembrane protein (AHRD V3.3 *** AT1G27290.2) AT1G27290 Solyc05g015720.2 432 109 212 174 94 149 126 92 124 142 218 144 102 143 190 MADS-box transcription factor (AHRD V3.3 *** F1T119_9ERIC) Solyc05g015730.1 66 15 28 21 7 14 15 16 21 28 23 25 7 10 13 MADS-box transcription factor (AHRD V3.3 *-* F1T119_9ERIC) AT2G26320 Solyc05g015735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015750.3 818 553 1109 869 200 431 193 207 205 577 184 709 17 626 237 SEPALLATA3 AT1G24260 Solyc05g015770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol acyl transferase (AHRD V3.3 *-* Q6QLX4_SOLLC) Solyc05g015780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 Unknown protein Solyc05g015790.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 galactan beta-1,4-galactosyltransferase GALS3 (AHRD V3.3 *-* A0A2I4EYQ4_9ROSI) Solyc05g015800.3 2 11 1 1 9 4 7 25 7 7 0 6 4 0 0 Alcohol acyl transferase (AHRD V3.3 *** Q6QLX4_SOLLC) Solyc05g015810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Benzyl alcohol O-benzoyltransferase (AHRD V3.3 *** A0A2G3ATB8_CAPCH) Solyc05g015815.1 16 1 8 5 0 1 0 1 8 18 7 4 1 0 28 Unknown protein Solyc05g015820.4 819 755 601 680 572 584 628 527 698 674 592 551 1176 975 785 BZIP transcription factor, putative (DUF1664) (AHRD V3.3 *** F4I978_ARATH) AT1G24267 Solyc05g015825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015840.3 14605 11341 5658 9493 18552 19453 19349 16540 4702 8578 7256 6589 7160 4462 5745 Squamosa promoter binding protein 13 AT5G50670 Solyc05g015850.4 21 22 1 1 12 4 0 9 11 12 19 3 34 41 4 WRKY transcription factor 75 AT5G13080 Solyc05g015860.4 1371 990 1457 1118 1377 1394 1333 1095 1246 1297 1806 1074 1351 1196 1480 Sphingosine-1-phosphate lyase-like protein (AHRD V3.3 *** A0A2K3NP24_TRIPR) AT1G27980 Solyc05g015865.1 28 43 44 56 92 87 89 75 42 36 39 39 35 45 71 Unknown protein Solyc05g015870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015880.3 446 300 193 700 20 30 36 7 589 227 422 98 498 266 1287 protein LAZY 1-like (AHRD V3.3 *** A0A2I4ENM3_9ROSI) AT5G14090 Solyc05g015885.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A1J3CN06_NOCCA) Solyc05g015890.4 25 5 1 7 8 5 2 3 4 3 7 14 0 2 4 transmembrane protein (AHRD V3.3 *** AT1G27990.1) AT1G27990 Solyc05g015900.4 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 Unknown protein Solyc05g015910.1 3 12 12 7 11 17 16 9 16 10 17 11 0 20 9 Glutaredoxin (AHRD V3.3 *** A0A2G9G4Q3_9LAMI) AT3G02000 Solyc05g015920.3 3017 2067 1668 1744 1513 1648 1713 1827 2116 1993 1550 1778 1728 2045 2256 GYF domain-containing protein (AHRD V3.3 *** A0A1Q3BTQ2_CEPFO) AT1G27430 Solyc05g015930.4 2929 1956 1491 1600 1219 1411 1462 1355 1665 1793 1514 1369 1622 1998 1921 GYF-like protein (AHRD V3.3 *** A0A2U1P3D7_ARTAN) AT1G27430 Solyc05g015940.2 9 2 22 19 7 31 17 43 17 25 17 34 13 14 28 11-beta-hydroxysteroid dehydrogenase 1B (AHRD V3.3 *-* HSD1B_ARATH) Solyc05g150119.1 2 2 10 25 21 15 15 15 6 18 11 36 8 4 26 Hydroxysteroid dehydrogenase (AHRD V3.3 *-* Q2R3W3_ORYSJ) Solyc05g015950.3 737 760 652 561 509 492 454 650 631 607 532 572 920 700 558 Glucose-6-phosphate 1-dehydrogenase (AHRD V3.3 *** Q8H9C8_SOLTU) AT5G13110 Solyc05g150120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g015980.3 602 1488 1964 1511 1960 2928 2735 1643 1192 891 1996 1428 1315 1430 1265 Gap junction beta-4 protein (AHRD V3.3 *** AT5G13100.1) AT5G13100 Solyc05g016000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016030.3 1651 1862 1785 1723 1605 1870 1919 1682 1542 1641 1754 1621 2070 1801 1534 S-acyltransferase (AHRD V3.3 *** A0A2I4F9K8_9ROSI) AT4G15080 Solyc05g016040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016060.4 689 301 317 214 12 30 32 35 98 279 206 75 248 227 340 cysteine-rich and transmembrane domain-containing protein WIH1 (AHRD V3.3 *-* XP_004239248.1) Solyc05g016070.2 6 0 3 0 1 1 1 0 0 1 3 5 3 3 0 Protein TOPLESS (AHRD V3.3 *-* A0A1J3DHH1_NOCCA) Solyc05g016120.2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *-* F0UWX1_9SPER) Solyc05g016130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf3 (AHRD V3.3 *-* A0A0U2UNQ3_OENEH) Solyc05g016160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 --* A0A2G2VM06_CAPBA) Solyc05g016180.3 201 77 70 85 37 20 23 19 46 73 68 41 66 32 131 Class I glutamine amidotransferase-like superfamily protein (AHRD V3.3 *-* A0A1R7T3G1_ARATH) Solyc05g150121.1 5 1 1 9 0 0 0 0 0 6 0 0 0 1 0 hypothetical protein (AHRD V3.3 *** AT1G68585.1) AT1G68585 Solyc05g016220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc05g016230.3 591 359 539 484 397 435 449 415 451 411 465 433 425 432 545 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein (AHRD V3.3 *** A0A1J3EMZ5_NOCCA) AT1G04020 Solyc05g016240.4 5750 4270 3304 4447 4424 4098 4217 4856 3753 5543 3225 4224 3697 4353 3236 protein PAT1 homolog 1-like (AHRD V3.3 *** A0A2I4EXG6_9ROSI) AT4G14990 Solyc05g016250.3 208 243 307 291 301 319 301 334 254 192 319 223 305 236 364 Cysteine proteinases superfamily protein (AHRD V3.3 *** F4J076_ARATH) AT3G22260 Solyc05g016260.3 414 219 124 144 115 89 94 79 103 153 172 107 129 208 189 Myosin family protein (AHRD V3.3 *-* A0A2U1KJU5_ARTAN) Solyc05g016290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1-like protein 3 (AHRD V3.3 *-* A0A2G3B0T6_CAPCH) Solyc05g016300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FLOWERING LOCUS D (AHRD V3.3 *-* A0A1J3ITA0_NOCCA) Solyc05g016310.1 40 26 35 4 0 5 0 1 16 26 22 4 28 24 35 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** G7KD30_MEDTR) AT3G59080 Solyc05g016320.2 3 8 19 15 11 18 16 12 7 10 23 0 0 2 13 Exostosin-like (AHRD V3.3 *** A0A200RAI3_9MAGN) Solyc05g016330.3 452 507 709 653 612 571 618 569 574 439 473 558 455 539 617 Cytochrome P450 (AHRD V3.3 *** A0A200QCI8_9MAGN) AT4G15110 Solyc05g016340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016343.1 3 5 1 0 0 0 0 0 0 3 0 0 0 0 0 Unknown protein Solyc05g016347.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc05g016370.2 28 6 18 14 6 2 6 1 8 13 13 0 20 25 16 Unknown protein Solyc05g016380.4 296 207 330 236 276 332 396 216 217 192 202 194 176 227 313 Rhomboid-like protein 14 (AHRD V3.3 *** A0A2K3N0Y0_TRIPR) Solyc05g016390.4 503 1107 910 1403 558 546 573 658 535 1572 1015 487 736 1041 752 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* F4IF51_ARATH) Solyc05g016410.3 4845 2946 3434 3110 2795 2754 3176 2545 2652 3361 3252 3064 2426 2910 3918 Casein kinase (AHRD V3.3 *** A2I5G0_BETVU) Solyc05g016415.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C (AHRD V3.3 *** Q6QLU0_SOLLC) Solyc05g016430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A1J3FTH3_NOCCA) Solyc05g016440.3 2017 2153 1743 2391 2335 2220 2348 2154 2083 2088 1734 2287 2054 2326 1797 Mediator of RNA polymerase II transcription subunit 23 (AHRD V3.3 *** A0A1J3CXP3_NOCCA) AT1G23230 Solyc05g016460.2 368 544 261 267 512 309 312 592 534 595 239 538 262 427 298 mediator of RNA polymerase II transcription subunit 23 (AHRD V3.3 *-* A0A2I4G1V6_9ROSI) Solyc05g016465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cellulose synthase (AHRD V3.3 *-* M1AK99_SOLTU) Solyc05g016490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016600.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat-containing protein (AHRD V3.3 *-* A0A2U1LL35_ARTAN) Solyc05g016620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat-containing protein (AHRD V3.3 *-* A0A2U1LL35_ARTAN) Solyc05g016670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g016690.3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nudix hydrolase (AHRD V3.3 *** A0A2U1KQS6_ARTAN) Solyc05g016710.3 24 12 84 21 70 72 63 42 10 22 52 26 34 27 12 Unknown protein Solyc05g016713.1 39 3 0 0 0 0 0 0 1 4 22 0 0 2 2 Raffinose synthase family protein (AHRD V3.3 *-* AT5G20250.3) Solyc05g016715.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Transcription initiation factor TFIID subunit 11b (AHRD V3.3 *-* A0A1U8EKS4_CAPAN) Solyc05g016717.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc05g017720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g017730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein At1g49475-like (AHRD V3.3 *-* XP_025886111.1) Solyc05g017740.1 14 2 1 1 4 7 7 7 0 5 0 1 2 0 0 High mobility group B protein 2 (AHRD V3.3 *-* A0A2G2XCE6_CAPBA) AT5G18000 Solyc05g017760.4 361 1148 508 668 919 819 757 1100 1778 1682 1019 2105 1186 1322 738 Acetyl-CoA C-acetyltransferase (AHRD V3.3 *** D9U856_BACMN) AT5G48230 Solyc05g017770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Wall-associated receptor kinase 1 (AHRD V3.3 *** A0A2G2ZJJ2_CAPAN) Solyc05g017780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Wall-associated receptor kinase 2 (AHRD V3.3 *-* A0A2U1Q9E2_ARTAN) Solyc05g017790.1 8 18 8 11 7 17 11 23 17 11 7 22 8 19 13 Unknown protein Solyc05g017793.1 59 38 45 57 35 49 68 37 79 74 100 38 48 44 49 Unknown protein Solyc05g017795.1 98 54 42 56 48 47 63 52 57 55 26 91 44 109 174 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2I4DIM6_9ROSI) Solyc05g017797.1 15 22 0 13 15 13 15 2 26 12 12 17 3 10 32 replication protein A 70 kDa DNA-binding subunit B-like (AHRD V3.3 *** A0A2I4FHD9_9ROSI) Solyc05g017830.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stomatal closure-related actin-binding protein 1 (AHRD V3.3 *-* A0A1U8EIL0_CAPAN) Solyc05g017840.4 190 162 264 236 172 195 198 136 161 156 251 180 203 198 213 Protein PLANT CADMIUM RESISTANCE like (AHRD V3.3 *-* A0A2R6RWP9_ACTCH) Solyc05g150122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carboxypeptidase (AHRD V3.3 *-* A0A2G3CMP3_CAPCH) Solyc05g017847.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc05g017860.3 1064 854 750 802 863 829 896 902 822 944 634 844 787 933 801 Protein VAC14-like protein (AHRD V3.3 *** A0A1U8EIK4_CAPAN) AT2G01690 Solyc05g017863.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *** A0A2U1PAR3_ARTAN) AT2G07505 Solyc05g017867.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MTR7_TRIPR) ATMG00240 Solyc05g017890.4 3026 2476 2131 1992 1968 1894 1979 1964 2221 1976 1805 1829 2012 2333 2231 THO complex subunit 2 (AHRD V3.3 *** A0A2G3ACB5_CAPAN) AT1G24706 Solyc05g017900.3 294 181 241 206 151 154 136 216 252 262 176 242 162 194 206 EamA domain-containing protein (AHRD V3.3 *-* A0A2U1MSW3_ARTAN) Solyc05g017910.1 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 Mitochondrial-processing peptidase subunit beta (AHRD V3.3 *-* A0A2G3B7D4_CAPCH) Solyc05g017930.2 7 2 0 1 0 2 1 1 1 1 1 1 0 2 1 Potassium channel (AHRD V3.3 *-* O24382_SOLTU) Solyc05g017940.3 96 63 130 126 33 73 85 39 56 60 145 93 78 92 130 EamA domain-containing protein (AHRD V3.3 *** A0A2U1KKY4_ARTAN) Solyc05g017950.3 1614 3280 2063 2096 3992 3861 3717 4038 2569 2642 1619 2940 2575 2269 1588 anion:sodium symporter AT2G26900 Solyc05g017955.1 299 119 183 222 231 196 204 155 148 161 175 189 132 176 152 Unknown protein Solyc05g017970.1 22 22 11 22 21 13 18 19 11 14 9 9 18 15 1 Unknown protein Solyc05g017980.3 1424 2177 2271 2151 2664 2949 3057 2621 2205 1416 2116 1944 2057 2392 2436 Microtubule-associated protein 70 (AHRD V3.3 *** A0A200QNX4_9MAGN) AT1G24764 Solyc05g017990.4 693 721 656 556 505 600 499 571 762 515 529 669 680 792 720 tRNA/rRNA methyltransferase (AHRD V3.3 *** A0A200QDK8_9MAGN) AT2G19870 Solyc05g018020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 disease resistance protein RGA2-like (AHRD V3.3 *-* XP_024195976.1) Solyc05g018030.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018050.1 29 13 11 10 0 7 0 2 8 6 11 16 3 34 54 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1KYA3_ARTAN) AT3G51325 Solyc05g018060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018065.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc05g018120.2 11 4 20 1 10 2 3 3 4 13 21 6 3 11 3 Transcription initiation factor TFIID subunit 11 (AHRD V3.3 *** A0A2G2ZHA0_CAPAN) Solyc05g018130.3 326 158 140 158 95 158 124 105 146 197 140 156 84 119 150 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** B4FBV2_MAIZE) AT1G35190 Solyc05g018150.3 834 909 831 704 711 704 654 733 640 605 547 640 1149 878 562 protein phosphatase 1 regulatory subunit pprA (AHRD V3.3 *** A0A2I4E5Y1_9ROSI) AT5G19680 Solyc05g018155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VDL0_9ASPA) ATMG00810 Solyc05g018160.1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G8GTN4_MEDTR) Solyc05g018170.1 0 1 0 1 0 5 0 2 1 0 0 1 0 0 0 Unknown protein Solyc05g018180.3 388 341 374 333 273 265 283 259 301 344 318 306 335 304 343 DUF810 domain-containing protein (AHRD V3.3 *** A0A1Q3D5J6_CEPFO),Pfam:PF05664 Solyc05g018185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018190.1 16 8 1 4 0 1 0 4 0 3 0 0 5 0 16 Unknown protein Solyc05g018210.3 1326 1370 1680 1920 2775 2812 2621 2801 1981 1811 1971 2306 987 1465 1652 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1P0W9_ARTAN) Solyc05g018215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018230.4 367 280 242 230 223 221 167 250 354 597 367 288 467 345 140 Sugar transporter protein 12 Solyc05g018240.4 1042 841 582 751 702 663 671 966 800 1122 754 851 657 784 679 CRS2-associated factor 1, chloroplastic (AHRD V3.3 *** A0A2G2VBU0_CAPBA) AT2G20020 Solyc05g018245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc05g018300.3 1195 1432 1498 1432 1366 1504 1634 1369 1258 1176 1133 1180 1533 1498 1304 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein (AHRD V3.3 *** A0A2G2WSK6_CAPBA) AT2G20050 Solyc05g018310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QGT0_ARTAN) AT2G20030 Solyc05g018320.3 2116 1564 1485 1155 1265 1286 1187 1101 1425 1738 1540 1329 1583 1615 1612 arabinogalactan AT4G28910 Solyc05g018340.4 1602 1670 1528 1460 1689 1588 1725 1570 1369 1415 1543 1456 1826 1601 1633 Zinc finger Ran-binding domain-containing protein 2 (AHRD V3.3 *** A0A2G3CGD8_CAPCH) AT4G28990 Solyc05g018350.4 326 426 381 294 359 383 307 372 333 237 342 369 390 424 359 trihelix transcription factor ASIL2-like (AHRD V3.3 *** A0A2I4GA85_9ROSI) AT3G24490 Solyc05g018360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type protein 1 (AHRD V3.3 *-* A0A2U1LUZ5_ARTAN) Solyc05g018370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 elastin (AHRD V3.3 *-* XP_010321220.1) Solyc05g018380.1 0 0 0 2 2 0 0 0 0 0 0 4 0 0 9 Unknown protein Solyc05g018390.3 260 416 489 416 441 717 578 490 483 313 531 420 395 451 432 Protein VERNALIZATION INSENSITIVE 3 (AHRD V3.3 *** A0A2G3CGH2_CAPCH) AT3G24440 Solyc05g150123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018403.1 0 0 2 0 0 0 0 2 0 3 0 0 0 0 2 Sigma-B regulation protein RsbQ (AHRD V3.3 *** A0A2T0KZ78_9BURK) AT3G24420 Solyc05g018405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018407.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3E1G7_NOCCA) Solyc05g018410.3 1 0 0 0 0 1 1 5 0 0 0 8 1 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein mitochondrial-like (AHRD V3.3 *** A0A2K3MN72_TRIPR) Solyc05g018413.1 0 6 0 1 4 0 0 5 3 1 0 0 0 8 5 Sigma-B regulation protein RsbQ (AHRD V3.3 *** A0A2T0KZ78_9BURK) AT3G24420 Solyc05g018417.1 838 810 642 578 713 701 645 741 859 751 561 693 790 734 438 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial (AHRD V3.3 *** A0A1J3EB91_NOCCA) AT4G13360 Solyc05g018430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Genome polyprotein (AHRD V3.3 *-* POLG_PVCV1) Solyc05g018435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc05g018440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018482.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* D5LVR1_9POAL) Solyc05g018484.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3L3J2_TRIPR) Solyc05g018486.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *-* A0A0H5R4E6_9EUKA) Solyc05g018488.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018490.3 874 746 761 587 644 666 577 671 1019 637 732 643 1083 927 1118 hypothetical protein (AHRD V3.3 *** AT2G25670.2) AT2G25670 Solyc05g018500.3 691 453 451 461 408 465 347 417 512 559 542 503 422 479 533 Protein OBERON 3 (AHRD V3.3 *** A0A2G3CKJ8_CAPCH) AT1G14740 Solyc05g018510.3 1298 1299 1093 1456 908 1012 903 1053 1597 1521 941 1395 1241 1256 1028 ABC transporter-like (AHRD V3.3 *** A0A200PN89_9MAGN) AT2G26910 Solyc05g018520.3 582 1104 1039 786 1119 985 921 1243 1195 978 845 1235 1144 1199 854 NADH-cytochrome b5 reductase (AHRD V3.3 *** K4BZA6_SOLLC) AT5G20080 Solyc05g018560.1 12 7 3 6 7 4 2 2 11 6 15 6 7 8 4 Unknown protein Solyc05g018563.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3NFQ0_TRIPR) Solyc05g018567.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3NTW1_TRIPR) ATMG00860 Solyc05g018570.3 1828 2350 2151 1894 2666 2537 2477 2839 2248 2120 1588 2254 2822 2411 1799 26S protease regulatory subunit 8 (AHRD V3.3 *** A0A2G3DFZ1_CAPCH) AT5G19990 Solyc05g018575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018590.3 1310 1451 1299 1179 1306 1488 1409 1460 1575 1238 1337 1415 1679 1434 1404 26S protease regulatory subunit 8 (AHRD V3.3 *** A0A2G3DFZ1_CAPCH) AT5G19990 Solyc05g018600.3 621 721 652 861 777 620 693 877 574 561 498 795 677 864 426 Actin-related protein 6 (AHRD V3.3 *** A0A1U8GPF8_CAPAN) AT3G33520 Solyc05g018610.3 362 417 476 533 434 461 467 349 404 376 418 433 602 500 509 chaperone protein dnaJ 49-like (AHRD V3.3 *** A0A2I4HS13_9ROSI) Solyc05g150124.1 2 3 3 1 3 1 1 0 1 2 0 2 4 3 6 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *-* A0A2U1Q4A9_ARTAN) Solyc05g018630.1 722 567 263 229 252 230 179 350 325 536 221 381 292 292 310 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *-* A0A2U1Q4A9_ARTAN) Solyc05g018640.3 38 27 23 32 27 30 38 37 40 71 19 32 18 27 22 Ultraviolet-B receptor UVR8 (AHRD V3.3 *-* A0A1U8F2B3_CAPAN) Solyc05g018650.4 2958 1792 2000 2212 1611 1985 2022 1738 1971 2617 2713 1882 1331 1675 2275 Ferrochelatase (AHRD V3.3 *** O64391_SOLTU) AT2G30390 Solyc05g150125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxisome biogenesis protein 2 (AHRD V3.3 *-* A0A2G2X6N8_CAPBA) Solyc05g018657.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3JSN7_NOCCA) Solyc05g018700.4 1646 1719 1811 2059 1837 1809 1837 2039 2373 1859 2062 2084 2462 2287 2503 Protein disulfide-isomerase (AHRD V3.3 *** A0A2G2WTW8_CAPBA) Solyc05g018710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc05g018720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late blight resistance protein R1-A (AHRD V3.3 *-* A0A2G3B523_CAPCH) Solyc05g018740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc-finger homeodomain protein 3 (AHRD V3.3 *** A0A2G3ATA7_CAPCH) Solyc05g018743.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc05g018747.1 97 146 96 129 99 136 144 106 97 91 100 116 174 131 96 Unknown protein Solyc05g018750.4 2537 2254 1632 1702 1480 1482 1596 1678 1305 1457 1285 1642 2001 1822 1469 GBF-interacting protein 1-like isoform X1 (AHRD V3.3 *** A0A2I4FNM4_9ROSI) AT3G07660 Solyc05g018760.3 295 179 297 265 168 166 168 152 173 260 269 220 268 251 328 RING/U-box superfamily protein (AHRD V3.3 *-* Q3EAE6_ARATH) AT2G04240 Solyc05g018770.2 3 6 9 8 1 6 7 2 1 3 7 0 5 4 16 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4I353_ARATH) Solyc05g018775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VA19_9ASPA) ATMG00810 Solyc05g018780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamate-rich WD repeat-containing protein 1 (AHRD V3.3 *** A0A1J3G1T1_NOCCA) Solyc05g018790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* O79414_SOLTU) Solyc05g018800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein (AHRD V3.3 *-* A0A1D8I1Y1_ORYRU) Solyc05g018810.4 4040 4046 3378 2515 2524 2360 2258 2427 2838 2146 2574 2553 3580 3204 4248 Nucleosome assembly protein family (AHRD V3.3 *** A9TVZ4_PHYPA) AT2G19480 Solyc05g018820.1 4 13 5 9 2 8 4 6 11 13 20 8 3 6 11 cotton fiber protein (AHRD V3.3 *-* AT5G56980.1) Solyc05g018830.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb/SANT-like domain (AHRD V3.3 *-* A0A200R712_9MAGN) Solyc05g018840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3B4E3_CEPFO) Solyc05g018850.1 49 14 27 26 26 31 15 15 8 31 16 31 15 34 4 Unknown protein Solyc05g018860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018865.1 8 6 1 3 29 4 3 2 10 4 8 7 1 7 6 Unknown protein Solyc05g018870.3 2 14 41 11 7 8 19 6 12 3 3 7 6 13 7 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A200PT05_9MAGN) Solyc05g018880.1 73 147 83 122 114 208 153 142 132 100 119 82 164 90 104 Amine oxidase (AHRD V3.3 *** A0A200PSW8_9MAGN) AT4G29720 Solyc05g018890.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Unknown protein Solyc05g018910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine-rich receptor-like protein kinase 42 (AHRD V3.3 *-* A0A2G3ABX8_CAPAN) Solyc05g018920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g018930.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Cysteine-rich receptor-like protein kinase 42 (AHRD V3.3 *-* A0A2G2XIU5_CAPBA) Solyc05g019980.2 2 5 2 6 1 5 5 1 3 0 6 0 5 1 2 Protein trichome birefringence-like 11 (AHRD V3.3 *-* A0A2G3BLD3_CAPCH) Solyc05g020000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc-finger homeodomain protein 3 (AHRD V3.3 *** A0A2G3ASA5_CAPCH) Solyc05g150126.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc05g020010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A0N9DZT7_9MAGN) Solyc05g020020.4 912 608 1414 995 928 984 1078 793 862 727 1280 835 775 1004 1291 Zinc finger protein CONSTANS-LIKE 9 (AHRD V3.3 *** A0A2G3BZP6_CAPCH) AT5G48250 Solyc05g020040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Inosine/uridine-preferring nucleoside hydrolase domain-containing protein (AHRD V3.3 *** A0A2U1L476_ARTAN) Solyc05g021070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A1J7GAT1_LUPAN) Solyc05g021090.4 17 5 17 4 0 1 0 0 3 6 0 5 24 16 7 NAC domain (AHRD V3.3 *-* A0A200QWV2_9MAGN) AT2G43000 Solyc05g021100.2 1392 1059 1328 1202 959 929 1079 884 1179 944 1205 1048 1232 1171 1620 Pleckstrin homology (PH) domain-containing protein (AHRD V3.3 *** F4IPT2_ARATH) AT2G30880 Solyc05g150127.1 51 28 21 24 22 17 21 28 43 44 28 22 41 34 14 Pleckstrin homology (PH) domain-containing protein (AHRD V3.3 *-* F4IPT2_ARATH) Solyc05g021140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2K3LRA9_TRIPR) Solyc05g150128.1 0 0 3 0 0 0 1 1 5 1 2 1 0 7 6 Unknown protein Solyc05g021160.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021190.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II D2 protein (AHRD V3.3 *-* A0A2G2XVH6_CAPAN) Solyc05g021200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/threonine-protein kinase RUNKEL (AHRD V3.3 *-* A0A2I4F337_9ROSI) Solyc05g021210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine protein kinase ULK4-like protein (AHRD V3.3 *-* A0A2K3NKZ3_TRIPR) Solyc05g021240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021245.1 0 0 0 1 0 0 0 0 1 0 5 0 0 0 7 Unknown protein Solyc05g021370.2 0 0 0 0 0 0 0 0 2 0 1 1 0 1 3 Unknown protein Solyc05g021390.4 5 1 3 6 1 2 1 0 4 5 13 0 2 1 1 Cytochrome P450 (AHRD V3.3 *** A0A200R9G0_9MAGN) AT5G36110 Solyc05g021400.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021415.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g150129.1 0 4 0 0 0 1 1 0 0 0 0 1 0 0 0 Integrator complex subunit 9-like protein (AHRD V3.3 *-* A0A2K3MRN7_TRIPR) Solyc05g021500.2 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 Cystathionine beta-lyase (AHRD V3.3 *-* A0A1U8EBG6_CAPAN) Solyc05g021510.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g021530.3 664 387 533 465 194 310 349 135 323 267 445 394 218 503 556 Sister-chromatid cohesion protein 3 (AHRD V3.3 *-* A0A2G3B9G7_CAPCH) Solyc05g150130.1 11 9 2 6 8 12 10 10 14 15 9 9 8 7 26 Alcohol dehydrogenase (AHRD V3.3 *-* A0A2U1MN94_ARTAN) Solyc05g021570.3 0 1 0 2 2 0 0 0 0 1 0 1 0 1 0 Alcohol dehydrogenase (AHRD V3.3 *-* B3TM26_ELAGV) Solyc05g021580.3 4 2 6 0 12 4 1 11 5 7 5 0 0 6 0 Serine/threonine-protein kinase TOR (AHRD V3.3 *-* A0A2G3AVJ6_CAPCH) Solyc05g023600.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sister-chromatid cohesion protein 3 (AHRD V3.3 *-* A0A2G3B9G7_CAPCH) Solyc05g150131.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Calmodulin-binding transcription activator 1 (AHRD V3.3 --* CMTA1_ARATH) Solyc05g023620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/threonine-protein kinase RUNKEL (AHRD V3.3 *-* A0A2I4F337_9ROSI) Solyc05g023635.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 E3 ubiquitin-protein ligase ORTHRUS 2 (AHRD V3.3 *-* A0A2G3B905_CAPCH) Solyc05g023680.4 869 2259 1746 1785 2553 2524 2374 2957 1710 1603 1446 2279 1307 1836 1069 E3 ubiquitin-protein ligase ORTHRUS 2 (AHRD V3.3 *** A0A2G3B905_CAPCH) AT1G57820 Solyc05g023700.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023710.3 800 930 700 700 719 724 688 662 542 442 478 659 840 849 585 nucleolar complex protein 2 homolog (AHRD V3.3 *** A0A2I4FAZ3_9ROSI) AT3G55510 Solyc05g023720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome f (AHRD V3.3 *** I6N969_DATST) Solyc05g023725.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L2, plastid (AHRD V3.3 *-* A0A2U1PJW3_ARTAN) Solyc05g023730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2, chloroplastic (AHRD V3.3 *-* I6N9C2_DATST) Solyc05g023733.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 eukaryotic translation initiation factor 3 subunit M-like (AHRD V3.3 --* XP_024181941.1) Solyc05g023737.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023740.3 4600 3957 5175 4404 4270 4476 4481 3682 4070 3563 5102 4106 3292 4451 5735 Arabidopsis mei2-like protein AT5G61960 Solyc05g023750.3 1384 1766 1708 1800 2179 2309 2314 2058 1775 1525 1507 1630 1641 1859 2096 Adp-ribosylation factor gtpase-activating protein agd3 (AHRD V3.3 *** A0A314LCP5_NICAT) AT5G13300 Solyc05g023755.1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc05g023760.3 306 474 536 521 895 821 815 854 508 537 496 676 542 515 364 Receptor-like protein kinase (AHRD V3.3 *** E5GB59_CUCME) AT5G13290 Solyc05g023770.4 1150 1626 1264 1267 1490 1166 1249 1833 1590 1812 990 1810 1384 1490 1318 Coiled-coil domain-containing protein SCD2 (AHRD V3.3 *** A0A2G2VN50_CAPBA) Solyc05g023800.3 3562 6303 5589 5673 7411 7284 7401 7409 5110 4842 4828 6082 7698 6563 5490 Ran protein/TC4 protein 1 AT5G55190 Solyc05g023810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023820.3 948 700 512 561 459 459 450 456 401 692 511 522 595 525 474 Sterile alpha motif domain (AHRD V3.3 *-* A0A200R3W2_9MAGN) AT3G48800 Solyc05g023825.1 1 2 0 0 0 0 0 1 0 0 0 1 0 0 0 Unknown protein Solyc05g023830.1 376 187 180 178 91 78 77 81 130 170 100 154 115 179 171 Unknown protein Solyc05g150132.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 Unknown protein Solyc05g023840.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant-specific tfiib-related protein ptf2 (AHRD V3.3 *-* A0A314KTQ6_NICAT) Solyc05g023841.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023842.1 3 0 0 0 0 2 1 2 0 0 0 0 0 0 6 Unknown protein Solyc05g023844.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBK9_TRIPR) Solyc05g023846.1 0 1 5 0 0 0 0 0 0 2 0 0 0 2 0 Unknown protein Solyc05g023848.1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 --* AT5G13230.1) Solyc05g023870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* A0A2U1N5F3_ARTAN) Solyc05g023880.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* A0A2U1MIJ5_ARTAN) Solyc05g023890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200R3X1_9MAGN) Solyc05g023895.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gag/pol polyprotein (AHRD V3.3 *-* Q6WAY3_PEA) Solyc05g023900.1 14 21 53 10 12 26 23 24 22 27 25 25 51 67 42 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R3X1_9MAGN) AT5G13230 Solyc05g023920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 1 (AHRD V3.3 *** A0A2G2YKR8_CAPAN) Solyc05g023930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter G family member 26 (AHRD V3.3 *-* A0A2G2W754_CAPBA) Solyc05g023950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transport membrane protein (AHRD V3.3 *-* A0A0C5ARU2_HYONI) Solyc05g023970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transport membrane protein (AHRD V3.3 *-* A0A0C5ARU2_HYONI) Solyc05g023980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g023990.2 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 Receptor-like protein kinase haiku2 (AHRD V3.3 *-* A0A1J6I576_NICAT) Solyc05g023995.1 6631 3918 4116 3326 2581 2351 2490 2566 7232 8004 8234 7691 4995 4425 4713 Unknown protein Solyc05g024000.1 1 0 16 0 8 0 3 0 6 3 11 6 11 9 6 PRF (AHRD V3.3 *-* Q96485_SOLLC) Solyc05g024010.3 552 449 924 577 129 200 173 200 918 429 847 852 527 868 706 Zinc finger protein CONSTANS-LIKE 15 (AHRD V3.3 *** A0A2G2VMU9_CAPBA) AT1G28050 Solyc05g024020.1 5 3 7 16 11 3 10 7 14 4 20 4 4 9 9 hypothetical protein (AHRD V3.3 *** AT4G26415.1) Solyc05g024030.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g024040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase-like protein (AHRD V3.3 *-* A0A2K3PA68_TRIPR) Solyc05g024050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g024060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1 like 1 (AHRD V3.3 *-* A0A2I0XG51_9ASPA) Solyc05g024070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1 like 1 (AHRD V3.3 *-* A0A2I0XG51_9ASPA) Solyc05g024090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1 like 1 (AHRD V3.3 *-* A0A2I0XG51_9ASPA) Solyc05g024100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase-like protein (AHRD V3.3 *-* A0A2K3PA68_TRIPR) Solyc05g024110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar protein-sorting-associated protein 33-like protein (AHRD V3.3 *-* A0A1J6K8K8_NICAT) Solyc05g024120.3 38 71 1 27 5 1 0 0 16 5 31 14 76 8 28 Vacuolar protein-sorting-associated protein 33-like protein (AHRD V3.3 *-* A0A1J6K8K8_NICAT) Solyc05g024130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1 like 1 (AHRD V3.3 *-* A0A2I0XG51_9ASPA) Solyc05g024140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein MEF2BNB-like protein (AHRD V3.3 *-* A0A1J3J2M0_NOCCA) Solyc05g024160.3 588 253 724 495 58 49 61 60 219 293 625 413 336 565 1607 Pyruvate dehydrogenase E1 component subunit beta (AHRD V3.3 *** A0A1U8ENS4_CAPAN) Solyc05g024170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein MEF2BNB-like protein (AHRD V3.3 *-* A0A1J3J2M0_NOCCA) Solyc05g024180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 APO protein 1, chloroplastic (AHRD V3.3 *-* A0A2G3DBI4_CAPCH) Solyc05g024190.3 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 Chlorophyll synthase, chloroplastic (AHRD V3.3 --* A0A2G2YSE5_CAPAN) Solyc05g150133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycerate dehydrogenase HPR, peroxisomal (AHRD V3.3 *-* A0A2G3C792_CAPCH) Solyc05g024200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g024210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dicer-like 3 (AHRD V3.3 *-* B3SRQ0_PHYPA) AT4G15417 Solyc05g024230.3 68 15 81 164 3 3 3 3 28 12 58 24 9 45 121 ethylene-responsive transcription factor CRF2-like (AHRD V3.3 *-* A0A2I4FBN4_9ROSI) Solyc05g024235.1 1255 1169 984 1344 1026 1003 1168 1193 938 1445 1058 1254 1382 1351 963 Enoyl CoA hydratase-like protein (AHRD V3.3 *** Q8RUL6_ORYSJ) AT5G43280 Solyc05g024250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 --* XP_014619111.1) Solyc05g024260.3 93 81 41 34 50 63 62 30 78 45 20 27 45 80 96 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A2G3C5C6_CAPCH) Solyc05g024290.3 869 889 901 743 735 759 709 776 1022 829 859 690 1061 1085 1016 Serine/threonine-protein kinase PBS1 (AHRD V3.3 *** A0A1U8EJL0_CAPAN) AT5G13160 Solyc05g024300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TMV resistance protein N (AHRD V3.3 *-* A0A2G2Y6F6_CAPAN) Solyc05g024310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *-* J7IAL0_FRAAN) Solyc05g024315.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *** A0A2K3NKU1_TRIPR) Solyc05g024330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g024340.1 11 0 0 1 0 3 0 0 0 0 0 0 0 0 0 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A2G2VNR9_CAPBA) AT5G13150 Solyc05g024350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3P9P3_TRIPR) Solyc05g024360.1 2 0 0 5 1 1 0 0 3 0 0 7 11 3 1 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3LMK6_TRIPR) Solyc05g024370.1 0 5 12 11 0 5 5 1 5 1 2 0 2 2 8 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3LZ69_TRIPR) Solyc05g024380.1 12 7 3 10 29 5 17 6 4 7 23 12 9 15 1 Unknown protein Solyc05g024385.1 0 1 0 2 0 0 0 0 0 1 0 0 0 4 16 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc05g024410.4 226 276 313 346 364 367 385 364 370 246 343 376 357 365 523 Nitrile-specifier protein 4 (AHRD V3.3 *** A0A2G2ZQF7_CAPAN) AT3G07720 Solyc05g024420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g024430.3 70 138 165 131 180 192 175 181 139 80 157 118 130 86 127 transmembrane protein (AHRD V3.3 *-* AT4G13500.1) AT4G13500 Solyc05g024440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A1U9HYP4_PASED) Solyc05g024450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g024453.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g024457.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025500.3 916 1501 1346 1104 2296 2068 1806 2223 1474 1049 1170 1528 1177 1262 845 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A2G2ZI86_CAPAN) AT5G58090 Solyc05g025510.3 3179 1920 1331 1590 1196 1431 1109 1096 1583 1545 1720 1419 1434 1591 1677 WD repeat-containing protein 26-like (AHRD V3.3 *** A0A2I4E332_9ROSI) AT5G08560 Solyc05g025513.1 460 223 379 271 159 111 158 161 175 221 247 197 263 294 337 Unknown protein Solyc05g025517.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025560.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025590.4 314 282 418 258 282 283 236 252 253 199 291 295 253 349 307 Replication protein A subunit (AHRD V3.3 *** A0A1U8GNS1_CAPAN) Solyc05g025600.1 2449 3617 3956 3538 8063 5824 5722 6181 5185 4174 5126 5025 3009 2794 5195 Photosystem II reaction center X protein (AHRD V3.3 *** A0A2G3CGE7_CAPCH) AT2G06520 Solyc05g025605.1 0 0 1 0 0 2 1 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc05g025620.3 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* A0A1I9LMK9_ARATH) Solyc05g025625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein CPR30 (AHRD V3.3 *-* XP_012076146.1) Solyc05g025630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1NGX5_ARTAN) Solyc05g025640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TTF-type zinc finger protein with HAT dimerization domain-containing protein (AHRD V3.3 *-* F4IJA9_ARATH) Solyc05g025650.3 191 210 276 215 110 149 174 163 259 154 221 183 283 234 221 RNA polymerase III RPC4 (AHRD V3.3 *** A0A2U1QBZ9_ARTAN) Solyc05g025660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein NRT1/ PTR FAMILY 6.1 (AHRD V3.3 *-* A0A2G2ZGE5_CAPAN) Solyc05g025665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc05g025670.1 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 Riboflavin synthase-like superfamily protein (AHRD V3.3 --* AT4G25090.2) Solyc05g025680.3 23 9 29 14 8 26 11 13 18 54 46 23 0 2 35 Respiratory burst oxidase homolog (AHRD V3.3 *** Q84KK8_NICBE) AT1G19230 Solyc05g025700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FC (AHRD V3.3 *-* A0A0C5APX0_HYONI) Solyc05g025710.1 0 0 0 0 1 0 0 0 2 0 0 5 0 0 0 60S ribosomal protein L23 (AHRD V3.3 *-* A0A2G2XU62_CAPAN) Solyc05g025720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant transposase (AHRD V3.3 *-* A0A1S8ADI0_CITLI) Solyc05g025725.1 65 89 88 164 67 96 69 91 82 127 45 68 89 110 153 Unknown protein Solyc05g025730.2 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 Endoglucanase (AHRD V3.3 *-* Q9ZSP9_SOLLC) Solyc05g025750.3 1381 2057 1398 1355 2114 1758 1947 2192 2122 2017 1052 1764 1962 1889 1478 SH3 domain protein (AHRD V3.3 *** A0A2K3ME66_TRIPR) Solyc05g025760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 asparagine-rich protein-like (AHRD V3.3 *-* XP_020397117.1) Solyc05g025780.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein kinase 3 AT3G42880 Solyc05g025785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025790.3 35 17 102 44 40 27 34 25 37 21 43 15 40 27 55 Potassium channel AKT2 (AHRD V3.3 *-* A0A1U8F4T5_CAPAN) Solyc05g025800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025810.3 185 107 55 122 80 91 73 54 72 74 68 55 57 74 167 Strictosidine synthase (AHRD V3.3 *** A0A2U1MD24_ARTAN) Solyc05g025815.1 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0V6Q6_9ASPA) ATMG00810 Solyc05g025820.4 36 18 22 13 3 15 3 4 19 25 28 6 13 22 21 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1QC97_ARTAN) AT2G05940 Solyc05g025870.4 5 0 0 6 0 0 0 0 0 1 0 7 0 2 0 mast cell carboxypeptidase A (AHRD V3.3 *-* XP_004238422.1) Solyc05g025880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MP domain-containing protein (AHRD V3.3 *-* A0A1Q3DHL6_CEPFO) Solyc05g025890.3 15 12 9 22 0 1 0 0 6 10 16 2 5 5 1 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** Q8GUT5_ARATH) AT2G06025 Solyc05g025900.3 2119 1089 934 1137 1097 1055 1008 967 931 1781 1119 1135 1027 1025 1182 MTD1 (AHRD V3.3 *-* Q9LLM3_MEDTR) AT5G21940 Solyc05g025903.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g025907.1 98 85 51 81 109 81 73 99 106 112 43 95 75 77 73 Unknown protein Solyc05g025910.3 217 187 342 289 180 213 243 156 210 164 264 185 206 254 391 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* K4BBV6_SOLLC) Solyc05g025920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin responsive SAUR protein (AHRD V3.3 *** A0A2U1KJX6_ARTAN) AT3G43120 Solyc05g025925.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc05g025950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *-* A0A2G2ZM49_CAPAN) Solyc05g025953.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc05g025955.1 0 0 0 0 0 0 0 0 3 0 0 0 4 0 0 ABC transporter B family member 11 (AHRD V3.3 *-* A0A2G2XDY2_CAPBA) Solyc05g150134.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *-* A0A1U8EPA3_CAPAN) Solyc05g025970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PGB0_TRIPR),Pfam:PF14223 Solyc05g025980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *-* A9T9D3_PHYPA) Solyc05g025985.1 10 41 69 58 42 41 33 38 75 27 57 45 22 37 1 Auxin responsive SAUR protein (AHRD V3.3 *** A0A2U1PXP1_ARTAN) AT5G20820 Solyc05g025990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 --* AT1G24735.2) Solyc05g026000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *-* A0A2G2ZM49_CAPAN) Solyc05g026040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *-* A0A2G3CKP4_CAPCH) Solyc05g026050.4 569 377 419 334 336 331 272 292 419 356 413 289 494 399 637 Vacuolar protein sorting-associated protein 32 (AHRD V3.3 *** A0A2U1MKD2_ARTAN) AT4G29160 Solyc05g026060.3 75 55 23 78 53 45 55 66 48 72 31 46 30 30 21 ephrin type-B receptor (AHRD V3.3 *-* AT5G11700.2) Solyc05g026070.1 51 37 57 51 35 42 34 39 58 64 24 33 21 33 9 glycine-rich protein (AHRD V3.3 *-* AT4G32920.3) Solyc05g026080.4 517 261 357 376 251 295 379 242 287 263 294 252 236 327 298 glycine-rich protein (AHRD V3.3 *** AT4G32920.3) Solyc05g026090.1 0 1 0 0 0 0 0 3 1 0 0 0 0 0 1 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc05g026100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g026130.3 253 364 361 371 490 475 466 475 344 306 330 308 510 417 364 AP complex subunit sigma (AHRD V3.3 *** A0A1U8E025_CAPAN) AT2G19790 Solyc05g026140.4 606 519 554 550 504 568 596 485 531 472 641 589 459 582 759 Root UVB sensitive family (AHRD V3.3 *** A0A2U1L102_ARTAN) AT2G31190 Solyc05g026150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mitochondrial-processing peptidase subunit alpha (AHRD V3.3 *-* A0A2U1P554_ARTAN) Solyc05g026153.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MK10_TRIPR) Solyc05g150135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mitochondrial-processing peptidase subunit alpha (AHRD V3.3 *-* A0A2K3NY23_TRIPR) Solyc05g026180.2 123 193 333 183 149 159 177 172 173 167 309 117 175 228 253 NAC domain (AHRD V3.3 *** A0A200QDG2_9MAGN) AT4G29230 Solyc05g026200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g026205.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc05g026210.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QY01_9MAGN) Solyc05g026213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QY01_9MAGN) Solyc05g026215.1 168 107 169 135 109 107 109 79 72 78 114 120 112 102 155 Unknown protein Solyc05g026217.1 107 99 111 141 67 81 80 91 96 113 68 98 78 84 88 40S ribosomal protein s14-like (AHRD V3.3 *-* A0A2K3LU38_TRIPR) Solyc05g026240.3 406 1333 1228 1240 2210 2521 2575 2091 978 920 1693 1296 1166 1080 1035 Leucine-rich repeat receptor-like protein kinase family (AHRD V3.3 *** A0A0K9Q1P6_ZOSMR) AT2G19780 Solyc05g026245.1 5 36 0 22 0 0 0 0 42 0 30 17 31 0 190 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VN15_9ASPA) Solyc05g026250.3 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 HMG-Y-related protein A-like (AHRD V3.3 *-* XP_010312916.1) Solyc05g026260.1 0 1 0 1 8 0 0 0 2 1 0 0 0 0 3 HMG-Y-related protein A-like (AHRD V3.3 *** XP_010312914.1) Solyc05g026310.4 505 669 508 574 634 492 568 666 523 495 422 687 630 693 393 Derlin (AHRD V3.3 *** A0A2G3CG93_CAPCH) AT4G29330 Solyc05g150136.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc05g026320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0C5CKA6_ACTCH) Solyc05g026330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G3CKP4_CAPCH) Solyc05g026350.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G2ZM62_CAPAN) Solyc05g026360.4 81 44 94 59 50 54 60 45 53 52 55 72 43 58 79 Pollen-specific protein SF21 (AHRD V3.3 *** A0A2G3AYL9_CAPCH) AT5G56750 Solyc05g026370.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Guanylate-binding protein (AHRD V3.3 *-* A0A200PQ44_9MAGN) Solyc05g026380.3 485 523 652 668 705 812 781 817 610 648 481 698 424 520 443 K(+) efflux antiporter 4 (AHRD V3.3 *** A0A2G2ZHQ5_CAPAN) Solyc05g026460.1 1342 347 322 373 192 171 240 204 613 3135 826 988 107 360 306 Unknown protein Solyc05g026470.2 12 18 9 14 41 49 50 85 22 24 47 35 15 25 14 Transcriptional corepressor LEUNIG (AHRD V3.3 *-* A0A2I0VVE3_9ASPA) Solyc05g026480.2 15 71 72 69 110 157 120 144 51 41 58 103 35 62 19 Transcriptional corepressor LEUNIG (AHRD V3.3 *** A0A2I0VVE3_9ASPA) Solyc05g026485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc05g026490.3 11 25 55 35 8 24 22 17 17 9 6 25 18 24 37 Phosphomannomutase/phosphoglucomutase (AHRD V3.3 *** A0A1J3D7Z0_NOCCA) AT1G70820 Solyc05g026500.1 206 104 58 74 40 72 70 58 44 64 47 96 74 98 68 Unknown protein Solyc05g026510.4 1373 1585 1380 1354 1543 1658 1609 1647 1651 1204 1234 1517 1684 1712 1270 Sister-chromatid cohesion protein 3 (AHRD V3.3 *** A0A2G3B9G7_CAPCH) AT2G47980 Solyc05g026520.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc05g026540.3 3072 2608 1955 1872 2014 1828 1940 2057 2153 1969 1812 1702 2947 2388 1940 transmembrane protein (Protein of unknown function DUF2359%2C transmembrane) (AHRD V3.3 *** AT1G23170.2) AT1G70770 Solyc05g026550.3 91 89 97 127 111 115 131 93 112 92 114 66 80 83 216 NADH dehydrogenase-like complex L (AHRD V3.3 *** A0A0F7CYX9_9ROSI) AT1G70760 Solyc05g026560.3 1064 1300 898 1174 1036 924 994 1079 1171 924 765 1040 1328 1186 1238 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1L8P6_ARTAN) AT1G23180 Solyc05g026570.3 88 68 39 143 18 43 26 35 37 68 82 66 48 91 158 Chlororespiratory reduction 3 (AHRD V3.3 *-* A0A0F7CZ71_9ROSI) AT2G01590 Solyc05g026590.2 0 3 5 4 1 0 0 0 2 8 0 4 0 22 13 Terpene synthase (AHRD V3.3 *** G5CV41_SOLLC) Solyc05g026595.1 1 2 1 5 0 0 0 2 1 0 0 6 2 1 0 Unknown protein Solyc05g026600.3 3 3 7 12 1 0 0 6 4 2 19 1 7 1 0 Terpene synthase (AHRD V3.3 *-* G5CV41_SOLLC) Solyc05g026603.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Linalool/nerolidol synthase (AHRD V3.3 *-* G5CV39_SOLLC) Solyc05g026607.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc05g032880.3 994 1262 1203 883 1179 1215 1150 1134 883 773 959 909 1368 1134 1076 50S ribosomal protein L9 (AHRD V3.3 *** A0A1J3G0X5_NOCCA) AT5G53070 Solyc05g032850.3 2207 1798 1514 1578 1747 1752 1601 2018 1573 2038 1110 1819 1945 2243 1675 Evolutionarily conserved C-terminal region 2 (AHRD V3.3 *** F4JDC2_ARATH) AT3G13060 Solyc05g032840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g032820.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenosylhomocysteinase (AHRD V3.3 *** Q069K5_NICSU) Solyc05g032825.1 40 38 13 22 8 12 24 9 23 17 15 9 15 32 7 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1KQG6_ARTAN) Solyc05g032780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TCP transcription factor 1 (AHRD V3.3 *** G3BGU2_SOLLC) Solyc05g032770.4 549 585 594 399 547 462 417 558 594 608 430 543 642 474 400 PHD finger protein ALFIN-LIKE 5 (AHRD V3.3 *** A0A2G3CGJ3_CAPCH) Solyc05g032750.3 2380 1015 728 703 707 778 756 824 1053 1191 1015 1010 794 963 859 protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 (AHRD V3.3 *** A0A2I4GL70_9ROSI) AT5G20610 Solyc05g032740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *-* A0A328DLR5_9ASTE) Solyc05g032730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MATE efflux family protein (AHRD V3.3 *-* A0A2U1PY16_ARTAN) Solyc05g032735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc05g032710.4 3 1 0 4 0 0 0 0 0 2 4 1 0 0 2 Unknown protein Solyc05g032690.2 9 7 38 13 13 9 1 5 84 28 24 24 9 31 23 3-hydroxyisobutyryl-CoA hydrolase 1 (AHRD V3.3 *-* A0A1J3HID6_NOCCA) Solyc05g032680.4 22 10 24 32 8 18 10 7 103 34 62 39 12 54 62 3-hydroxyisobutyryl-CoA hydrolase 1 (AHRD V3.3 *** A0A2G3DIP5_CAPCH) Solyc05g032670.3 161 195 215 303 273 284 267 185 250 135 203 165 160 231 231 Unknown protein Solyc05g032660.4 334 459 435 431 654 516 606 724 517 485 425 483 352 389 273 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *-* F4JSA6_ARATH) AT5G04900 Solyc05g032650.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Zinc finger transcription factor 38 Solyc05g032640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g032630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g032620.1 300 290 246 946 489 384 536 516 324 744 391 449 330 342 255 Unknown protein Solyc05g031600.3 0 0 0 2 2 2 0 0 3 0 12 1 6 0 12 Tryptophan aminotransferase-related protein 2 (AHRD V3.3 *** A0A2G3ANV2_CAPAN) AT1G70560 Solyc05g039910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc05g150137.1 8 6 16 11 19 10 14 24 11 10 13 5 10 7 3 Cytochrome c-type biogenesis ccda-like chloroplastic protein (AHRD V3.3 *-* A0A2G2Z5A3_CAPAN) Solyc05g039940.2 129 147 185 189 246 232 223 198 103 158 178 102 119 107 85 Unknown protein Solyc05g039950.2 25 72 54 90 119 128 59 140 93 86 55 139 67 59 50 Acyltransferase-like protein (AHRD V3.3 *** Q589X8_TOBAC) Solyc05g039960.1 0 1 0 0 1 0 1 2 1 1 0 0 0 2 0 NHL domain protein (AHRD V3.3 *** A0A1P8BDM5_ARATH) AT3G01430 Solyc05g039970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H (AHRD V3.3 *** A0A2K3MXN9_TRIPR) Solyc05g039990.4 209 133 99 247 108 116 109 124 109 235 91 172 145 159 117 Unknown protein Solyc05g040000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1 like 1 (AHRD V3.3 *-* A0A2I0XG51_9ASPA) Solyc05g040010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1-like protein 1 (AHRD V3.3 *-* A0A2G3BES3_CAPCH) Solyc05g040020.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g040030.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Unknown protein Solyc05g040040.1 0 2 1 13 15 19 30 8 3 5 7 13 11 4 2 F-box protein SNE (AHRD V3.3 *** A0A2G3BZC0_CAPCH) AT5G48170 Solyc05g040050.3 560 666 765 614 630 739 705 619 872 561 770 610 727 810 661 DnaJ domain-containing protein (AHRD V3.3 *** A0A2U1M065_ARTAN) AT2G05230 Solyc05g040060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ASHR1 (AHRD V3.3 *-* A0A2G2WJX2_CAPBA) Solyc05g040065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g040090.1 26 10 17 21 3 9 19 18 12 9 26 14 26 18 22 Membrin (AHRD V3.3 *-* A0A2G3ALS8_CAPAN) Solyc05g040100.4 67 42 66 56 77 55 70 52 48 35 72 39 59 59 80 Membrin (AHRD V3.3 *** A0A2G3ALS8_CAPAN) Solyc05g041100.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A2K3P6E1_TRIPR) AT5G60140 Solyc05g041110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK-related protein kinase (AHRD V3.3 *-* A0A1U8EC13_CAPAN) Solyc05g041113.1 0 2 2 1 0 0 0 1 1 2 0 0 0 0 4 Non-functional NADPH-dependent codeinone reductase 2 (AHRD V3.3 *-* A0A2G3A0P9_CAPAN) Solyc05g150138.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MRG7_TRIPR) Solyc05g041140.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein (AHRD V3.3 *** A0A103YIU0_CYNCS) AT3G53980 Solyc05g041145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g041150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methyl-CpG-binding domain-containing protein 2 (AHRD V3.3 --* MBD2_ARATH) Solyc05g041160.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 methyl-CpG-binding domain-containing protein 2-like (AHRD V3.3 --* XP_023771229.1) Solyc05g041170.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A328DLS1_9ASTE) AT2G28230 Solyc05g041173.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g041177.1 0 1 8 0 6 2 2 1 3 1 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3JID9_9ROSI) Solyc05g041200.4 2633 1457 755 1042 732 643 541 967 1334 3517 997 1461 1604 1066 1019 4-hydroxyphenylpyruvate dioxygenase (AHRD V3.3 *** A0A2G2WSP4_CAPBA) Solyc05g041210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g041220.3 42 106 94 116 401 408 287 387 146 109 203 220 108 97 108 Transcriptional regulator STERILE APETALA (AHRD V3.3 *** A0A1U8GU38_CAPAN) AT5G35770 Solyc05g041230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A191T5C6_9VIRI) Solyc05g041240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF810 domain-containing protein (AHRD V3.3 *-* A0A1Q3BC95_CEPFO),Pfam:PF05664 Solyc05g041260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g041270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *-* A0A2G2WXL9_CAPBA) Solyc05g041280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g041300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *-* A0A2G3CKP4_CAPCH) Solyc05g041310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *-* A0A2G2ZM62_CAPAN) Solyc05g041320.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *-* A0A2G3CKQ2_CAPCH) Solyc05g041330.1 0 0 11 1 0 2 0 1 0 0 4 0 0 1 4 Ankyrin repeat-containing protein (AHRD V3.3 *-* A0A2U1ME69_ARTAN) Solyc05g041340.2 0 0 5 0 0 0 0 0 0 0 1 0 0 0 0 Ankyrin repeat family protein (AHRD V3.3 *** A0A2U1NRZ9_ARTAN) Solyc05g041350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-RELATED SEQUENCE 4 (AHRD V3.3 *-* A0A1U8FTT3_CAPAN) Solyc05g041370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Argonaute family member (AHRD V3.3 *-* A9RG03_PHYPA) Solyc05g041390.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc05g041420.4 367 160 210 247 119 152 157 127 224 193 231 197 150 151 204 MAP kinase kinase kinase 36 Solyc05g041430.3 287 177 239 222 268 257 244 221 292 207 320 280 210 180 381 PTB domain engulfment adapter (AHRD V3.3 *** A0A1P8B0D8_ARATH) AT2G04790 Solyc05g041440.4 161 118 190 187 125 158 148 109 180 179 320 157 163 161 163 Ankyrin repeat family protein (AHRD V3.3 *** A0A2U1PBX5_ARTAN) Solyc05g041470.2 40 45 55 35 36 30 22 38 39 47 23 26 34 32 6 Ankyrin repeat-containing domain, PGG domain protein (AHRD V3.3 *-* A0A2U1NLI3_ARTAN) Solyc05g041500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UPF0481 protein At3g47200-like (AHRD V3.3 *-* A0A2I4DWW4_9ROSI) Solyc05g041510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type-like protein (AHRD V3.3 *-* A0A1I9LT82_ARATH) Solyc05g041520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Long chain acyl-CoA synthetase 2 (AHRD V3.3 *-* A0A2G2W2V7_CAPBA) Solyc05g041530.3 503 392 468 500 452 520 648 431 509 432 528 384 246 360 555 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LLS3_ARTAN) AT5G25770 Solyc05g041540.4 25 21 5 12 0 1 3 3 15 9 20 2 34 24 30 Carboxypeptidase (AHRD V3.3 *** A0A2G3BBI5_CAPCH) AT3G45010 Solyc05g041570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat-containing domain, PGG domain, Gag-polypeptide of LTR copia-type (AHRD V3.3 *** A0A2U1LU91_ARTAN) Solyc05g041580.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Ankyrin repeat (AHRD V3.3 *-* A0A200PSY1_9MAGN) Solyc05g041590.4 0 0 0 0 0 1 4 0 1 1 0 0 0 0 0 Ankyrin repeat family protein (AHRD V3.3 *-* A0A2U1MMH5_ARTAN) Solyc05g041610.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G3CKP4_CAPCH) Solyc05g041620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G3CKP4_CAPCH) Solyc05g150139.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-functional NADPH-dependent codeinone reductase 2 (AHRD V3.3 *-* A0A2G3A0P9_CAPAN) Solyc05g041625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g150140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H (AHRD V3.3 *-* A0A2K3L2Q2_TRIPR) Solyc05g041640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G3CKP4_CAPCH) Solyc05g041650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G3CKP4_CAPCH) Solyc05g041660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *-* A0A2G2ZM49_CAPAN) Solyc05g041670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G2ZMD9_CAPAN) Solyc05g041690.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G3CKP4_CAPCH) Solyc05g041700.1 413 225 314 225 145 88 140 100 94 189 131 97 152 176 95 Unknown protein Solyc05g041710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g041720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 54 (AHRD V3.3 *** A0A1U8GST2_CAPAN) Solyc05g041730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding KH domain-containing protein PEPPER-like (AHRD V3.3 --* XP_025888420.1) Solyc05g041750.1 6 0 9 1 2 6 0 1 3 2 5 1 0 5 1 Unknown protein Solyc05g041760.1 0 0 1 1 0 0 0 0 0 0 0 0 4 1 0 Unknown protein Solyc05g041770.3 9 13 14 8 8 11 3 8 4 2 21 12 6 16 19 Guanylate-binding family protein (AHRD V3.3 *-* A0A2U1PP48_ARTAN) Solyc05g041780.1 3 5 2 4 7 4 2 3 3 2 17 20 19 1 9 replication protein A 70 kDa DNA-binding subunit B-like isoform X1 (AHRD V3.3 *-* XP_025886291.1) Solyc05g041785.1 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 *-* A0A2I4EHD5_9ROSI) Solyc05g041820.1 0 1 5 0 0 5 0 0 4 4 1 0 2 15 0 Unknown protein Solyc05g041860.4 482 300 292 381 260 228 296 224 272 205 298 288 247 273 235 Unknown protein Solyc05g041870.2 38 11 8 16 0 0 0 0 3 12 0 0 33 2 21 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *-* A0A1Q3DJL5_CEPFO) Solyc05g041880.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g041910.3 1230 952 1120 906 435 531 472 470 797 1136 1349 678 1314 1289 1169 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A2G3BZZ3_CAPCH) Solyc05g041920.3 51 32 57 56 3 9 16 6 25 26 38 24 37 25 42 Dicer-like 3 (AHRD V3.3 *-* B3SRQ0_PHYPA) AT4G15417 Solyc05g041940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *-* A0A2G2ZM62_CAPAN) Solyc05g041950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A2G3CKP4_CAPCH) Solyc05g041960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g041970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc05g041990.1 9 6 12 7 5 5 3 6 7 4 10 8 3 5 10 Unknown protein Solyc05g150141.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g042010.1 28 18 32 14 17 16 23 28 16 11 32 15 10 18 38 Heavy metal-associated isoprenylated plant protein 26 (AHRD V3.3 *-* A0A2G2ZMM7_CAPAN) Solyc05g042015.1 3 4 4 6 0 8 0 0 1 3 1 2 6 3 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3HQQ3_COCAP) Solyc05g042020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ripening-related protein (AHRD V3.3 *-* A0A2K3MKP2_TRIPR) Solyc05g042030.3 4201 1596 1403 1491 1104 1276 1172 1192 1315 1634 1427 1334 1122 1279 1502 Bromo adjacent homology (BAH) domain-containing protein (AHRD V3.3 *** A0A2U1KLP9_ARTAN) AT4G22140 Solyc05g042040.3 427 337 326 405 273 309 354 354 257 322 286 365 389 452 312 plant UBX domain-containing protein 4-like (AHRD V3.3 *** A0A1S3YSD2_TOBAC) AT4G15410 Solyc05g042050.4 267 290 235 236 353 304 308 336 279 339 292 328 356 288 180 Drug/metabolite transporter (AHRD V3.3 *-* A0A200RBC1_9MAGN) AT2G05755 Solyc05g042060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g042070.4 55 27 47 33 17 27 39 32 19 40 16 23 27 28 28 Unknown protein Solyc05g042090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant resistance protein (AHRD V3.3 *-* O81136_SOLLC) AT4G19060 Solyc05g042100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant resistance protein (AHRD V3.3 *-* O81136_SOLLC) Solyc05g042110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant resistance protein (AHRD V3.3 *-* O81136_SOLLC) Solyc05g042120.4 632 491 543 517 499 522 501 506 479 539 455 513 467 525 516 Embryo defective 1381 (AHRD V3.3 *** F4IQS9_ARATH) AT2G31340 Solyc05g042150.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *-* A0A1U8F3P2_CAPAN) Solyc05g042155.1 11 10 18 8 24 11 17 3 9 6 7 7 13 13 12 Transposon protein (AHRD V3.3 *-* A0A2I4S638_ORYNI) Solyc05g042160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g042170.1 0 2 2 0 0 0 0 0 0 4 0 0 0 0 0 Unknown protein Solyc05g042180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding KH domain-containing protein PEPPER (AHRD V3.3 *-* A0A2G2XN02_CAPBA) Solyc05g042185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1KC75_ARTAN) Solyc05g043210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding KH domain-containing protein PEPPER (AHRD V3.3 *** A0A2G2XN02_CAPBA) Solyc05g043230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g043240.1 101 48 86 58 46 47 40 55 36 84 73 75 67 52 19 Unknown protein Solyc05g043243.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3IMG1_NOCCA) Solyc05g043247.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 54 (AHRD V3.3 *** A0A1U8GST2_CAPAN) Solyc05g043290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g043300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g043320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2ZZW7_CAPAN) Solyc05g043330.3 104 108 106 171 107 100 124 131 153 189 130 230 198 146 91 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2Z312_CAPAN) Solyc05g043350.4 960 633 556 584 493 479 553 555 599 630 486 561 533 676 689 Centromere/kinetochore protein zw10-like protein (AHRD V3.3 *** A0A2G2ZI12_CAPAN) AT2G32900 Solyc05g043360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Laccase (AHRD V3.3 *** K4C0L8_SOLLC) Solyc05g043380.1 0 3 0 0 0 0 0 1 1 0 0 0 0 0 0 Unknown protein Solyc05g043390.2 7 6 9 9 1 5 6 3 7 0 14 12 6 11 6 U-box domain-containing protein 35 (AHRD V3.3 *-* A0A2G3ANR8_CAPAN) Solyc05g043400.2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g043405.1 97 42 71 117 40 44 99 32 48 49 78 74 56 111 94 Unknown protein Solyc05g043410.1 0 3 0 9 6 12 7 4 3 5 0 2 8 3 0 Unknown protein Solyc05g043420.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant resistance protein (AHRD V3.3 *** O81136_SOLLC) Solyc05g043430.4 1304 1009 900 951 854 802 813 977 1029 1045 709 821 985 879 1178 Carboxymethylenebutenolidase (AHRD V3.3 *** A0A2I0VP35_9ASPA) AT2G32520 Solyc05g043440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell differentiation RCD1-like protein (AHRD V3.3 *-* A0A2K3JZ52_TRIPR),Pfam:PF04078 Solyc05g044440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mitogen-activated protein kinase kinase kinase a-like protein (AHRD V3.3 --* A0A2K3MG41_TRIPR) Solyc05g044450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell differentiation protein RCD1-like protein (AHRD V3.3 *** A0A2G3CUT5_CAPCH),Pfam:PF04078 Solyc05g044460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CCR4-NOT transcription complex subunit 9-like isoform X1 (AHRD V3.3 *-* XP_019069343.2),Pfam:PF04078 Solyc05g150142.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 nuclear transcription factor Y subunit C-1-like (AHRD V3.3 *** XP_004240301.1) Solyc05g044470.3 83 107 67 88 107 73 69 62 102 78 65 63 98 107 84 B-cell receptor-associated 31-like protein (AHRD V3.3 *-* A0A2U1PUK6_ARTAN) Solyc05g044480.3 2528 2279 1504 1655 1907 1755 1800 2143 2462 2467 1302 2454 2132 2174 1609 RNA helicase DEAH-box16 AT1G05120 Solyc05g044490.3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 Plant resistance protein (AHRD V3.3 *** O81136_SOLLC) Solyc05g044500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g044510.2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA helicase DEAH-box17 AT1G05120 Solyc05g044513.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc05g044517.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc05g044540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 RING/U-box superfamily protein (AHRD V3.3 *-* F4KCY6_ARATH) Solyc05g044545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3DC90_CEPFO) Solyc05g044550.1 0 0 2 0 0 0 0 2 0 0 0 0 0 3 0 Unknown protein Solyc05g044555.1 49 9 42 19 14 15 22 8 13 19 15 27 20 30 25 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc05g044560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g044570.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (AHRD V3.3 *-* F4HTG1_ARATH) Solyc05g044590.1 3 0 1 7 10 5 9 4 4 4 1 6 0 2 3 Unknown protein Solyc05g044600.1 72 38 41 49 80 40 58 44 45 54 44 53 41 50 83 Unknown protein Solyc05g044610.3 3617 2308 2646 2805 2064 2491 2934 2048 2590 2427 2485 2279 2242 3016 3329 vacuolar protein sorting-associated protein 8 homolog (AHRD V3.3 *** A0A2I4ETR7_9ROSI) AT4G00800 Solyc05g044620.3 47 76 141 41 71 66 62 69 90 20 125 47 62 68 35 Unknown protein Solyc05g044630.3 160 179 165 200 238 313 280 230 233 165 185 213 158 150 231 NifU-like protein 3, chloroplastic (AHRD V3.3 *** A0A2G3BJZ5_CAPCH) AT4G25910 Solyc05g045650.4 609 655 737 645 505 551 477 516 738 906 743 547 804 535 525 glutamate receptor-like3.4 AT1G05200 Solyc05g045660.3 0 0 14 3 0 1 0 1 0 0 4 3 0 0 0 Ras-related small GTP-binding family protein (AHRD V3.3 *** A0A2U1P8S6_ARTAN) Solyc05g045670.4 1 480 287 2093 508 613 519 702 306 132 54 308 265 2065 244 Glucose-6-phosphate/phosphate-translocator (AHRD V3.3 *** O64911_SOLTU) AT1G61800 Solyc05g045675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g045690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type-like protein (AHRD V3.3 *-* Q9SZ82_ARATH) Solyc05g045700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g045710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 65 Solyc05g045720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase (AHRD V3.3 *-* G9FCM3_9LAMI) Solyc05g045760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S19 (AHRD V3.3 *** A0A060D4Y0_9GENT) ATCG00820 Solyc05g045770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC) Solyc05g045780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L16 (AHRD V3.3 *** A0A290WKW7_SOLLC) Solyc05g045800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 67 Solyc05g045820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S19 (AHRD V3.3 *** A0A290WKX2_SOLLC) ATCG00820 Solyc05g045822.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* I3NTR2_IBILU) Solyc05g045824.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* I3NTR2_IBILU) Solyc05g045826.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC) Solyc05g045828.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC) Solyc05g045840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L16 (AHRD V3.3 *** A0A290WKW7_SOLLC) Solyc05g045850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A2G2X686_CAPBA) Solyc05g045870.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A0C5B2A3_HYONI) Solyc05g045880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 66 Solyc05g045890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-dependent RNA polymerase (mitochondrion) (AHRD V3.3 --* YP_002608352.1) Solyc05g045920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L16 (AHRD V3.3 *** A0A1Q1AMB0_9MAGN) Solyc05g045930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A2G3D2T0_CAPCH) ATMG00160 Solyc05g045927.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-binding WRKY (AHRD V3.3 *-* A0A2U1M9F7_ARTAN) Solyc05g045950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Protein phosphatase 2A regulatory subunit A (AHRD V3.3 *-* C0L8B0_BETPN) Solyc05g045953.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g045957.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HAT family dimerization domain containing protein (AHRD V3.3 *-* A0A2K3JRT3_TRIPR) Solyc05g045970.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g045980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g046000.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4C0T3_SOLLC) Solyc05g046010.4 13 4 0 30 0 0 0 0 4 3 0 1 5 1 26 Peroxidase (AHRD V3.3 *** K4C0T4_SOLLC) AT1G05260 Solyc05g046020.3 0 13 0 14 148 95 88 144 3 11 4 3 6 4 32 Peroxidase (AHRD V3.3 *** K4C0T5_SOLLC) AT1G05260 Solyc05g046030.4 1 6 6 4 7 4 9 4 19 13 58 5 4 6 10 Peroxidase (AHRD V3.3 *** K4C0T6_SOLLC) AT1G05260 Solyc05g046040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger protein CONSTANS-LIKE 12-like (AHRD V3.3 *** A0A2I4GR93_9ROSI) AT3G21880 Solyc05g046100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g046110.4 39 94 124 61 189 177 153 106 139 66 181 81 122 81 60 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CI87_CEPFO) AT1G05280 Solyc05g046120.3 149 153 114 124 98 110 135 129 101 79 120 122 131 140 127 Formin-like protein (AHRD V3.3 *** A0A2G3CFV1_CAPCH) Solyc05g046130.4 62 42 52 40 14 38 19 23 26 20 20 27 27 19 62 DUF1218 domain-containing protein (AHRD V3.3 *** A0A1Q3CI94_CEPFO) AT2G32280 Solyc05g046140.3 103 85 126 73 19 12 12 2 42 36 129 50 58 136 131 Kirola (AHRD V3.3 *** A0A2G3B0M8_CAPCH) Solyc05g150143.1 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc05g046150.3 1 0 0 0 0 5 2 3 0 0 0 0 0 0 0 Kirola (AHRD V3.3 *** A0A2G3CFG1_CAPCH) Solyc05g046160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kirola (AHRD V3.3 *-* A0A2G2WRW0_CAPBA) Solyc05g046170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kirola (AHRD V3.3 *-* A0A1U8GVS3_CAPAN) AT1G70860 Solyc05g046180.1 2 0 0 4 0 0 0 0 0 0 0 4 0 0 0 Unknown protein Solyc05g046190.1 4 0 0 2 0 0 0 0 0 2 1 0 0 10 0 Unknown protein Solyc05g046200.3 6 4 17 5 1 3 1 0 5 7 10 6 3 13 0 Unknown protein Solyc05g150144.1 4 0 0 0 1 0 1 0 0 2 0 0 0 2 0 Kirola (AHRD V3.3 *** A0A1U8F0U0_CAPAN) Solyc05g046210.3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 kirola-like (AHRD V3.3 *-* XP_025886742.1) Solyc05g046215.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kirola (AHRD V3.3 *-* A0A2G3CFG1_CAPCH) AT1G70860 Solyc05g046220.1 0 1 1 0 0 0 0 0 1 1 3 0 0 0 8 Kirola (AHRD V3.3 *-* A0A1U8F0U0_CAPAN) Solyc05g046225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein PELPK1 (AHRD V3.3 --* XP_004240134.1) Solyc05g046240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein PELPK1 (AHRD V3.3 *** XP_004240134.1) AT5G09520 Solyc05g046270.3 113 34 50 55 13 28 33 12 37 106 62 41 25 46 47 hypothetical protein (AHRD V3.3 -** AT5G54585.1) AT5G54585 Solyc05g046280.3 50 49 63 41 38 48 57 45 54 51 34 43 46 47 22 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QVR9_9MAGN) AT3G49740 Solyc05g150145.1 16 12 24 6 4 5 6 16 16 9 1 10 16 21 16 Unknown protein Solyc05g150146.1 29 25 36 32 29 25 23 39 23 13 32 20 30 22 45 Unknown protein Solyc05g046290.3 6 4 9 4 1 2 5 3 7 9 7 7 5 6 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2I4GLN4_9ROSI) Solyc05g046300.3 1060 762 863 680 647 636 668 566 690 762 806 723 760 710 587 Ethanolamine-phosphate cytidylyltransferase (AHRD V3.3 *** A0A2G3BYY5_CAPCH) Solyc05g046310.3 456 268 252 212 182 229 190 191 231 242 219 305 292 265 239 DBH-like monooxygenase (AHRD V3.3 *** AT5G35320.1) AT5G35320 Solyc05g046320.1 301 519 704 805 758 875 713 689 364 414 357 697 510 755 361 Small auxin up-regulated RNA55 Solyc05g046330.4 2223 3585 2378 2416 3044 2645 2610 3420 3090 3248 2290 3614 4015 3461 2230 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (AHRD V3.3 *** A0A2G3CGY3_CAPCH) AT4G21150 Solyc05g046340.2 5 2 0 0 0 2 0 1 4 0 0 0 8 8 0 Phosphomannomutase (AHRD V3.3 *** A0A2G3BTT3_CAPCH) AT2G45790 Solyc05g046350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tryptophan synthase beta chain (AHRD V3.3 *-* B2J8R2_NOSP7) Solyc05g046360.3 0 1 0 6 8 13 8 10 5 4 0 8 0 4 0 Cell differentiation protein RCD1-like protein (AHRD V3.3 *** A0A2G3CUT5_CAPCH),Pfam:PF04078 Solyc05g046370.1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 Yellow stripe-like transporter 6 (AHRD V3.3 *-* T1Q4F6_ARAHY) Solyc05g046380.1 0 0 7 0 0 5 0 0 0 0 0 4 0 0 0 OPT domain-containing protein (AHRD V3.3 --* A0A1Q3BRE8_CEPFO) Solyc05g046390.3 496 832 1261 1190 1023 1061 1338 982 832 554 1023 886 1035 1008 1234 neuronal acetylcholine receptor subunit alpha-5 (AHRD V3.3 *** AT2G31490.1) AT2G31490 Solyc05g047390.1 1059 1737 1670 1492 2063 1781 1735 1546 1078 1130 1540 1395 2701 1694 1671 Mitochondrial import receptor subunit TOM7-1 (AHRD V3.3 *** A0A1U8HGG2_CAPAN) AT5G41685 Solyc05g047400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-related sequence 5-like (AHRD V3.3 *-* A0A2K3LK03_TRIPR) Solyc05g047420.4 1358 1256 1276 1082 825 1031 1001 784 903 885 1123 1106 1401 1384 1394 Protein ECERIFERUM 7 (AHRD V3.3 *** A0A1U8GN26_CAPAN) AT3G60500 Solyc05g047430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g047440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc05g047450.3 930 841 968 887 1136 1012 964 1134 1002 922 562 948 1077 982 688 Methyl-CpG-binding domain-containing protein 2 (AHRD V3.3 *** A0A2G3CGY8_CAPCH) Solyc05g047460.3 5926 5387 6036 6228 5778 5752 5925 6739 6503 4988 6288 5033 3772 6278 8807 Auxin Response Factor 7B Solyc05g047470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) Solyc05g047480.2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 SOUL heme-binding protein (AHRD V3.3 *-* A0A200QHR3_9MAGN) Solyc05g047485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc05g047510.3 0 0 0 0 0 0 0 0 0 1 0 0 3 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc05g047520.4 2540 2409 2157 1674 1769 1775 2055 2075 1850 1804 1404 1942 2405 2393 1576 Helicase (AHRD V3.3 *** A0A200R9A6_9MAGN) AT2G06990 Solyc05g047530.3 0 4 0 3 11 2 6 5 1 3 15 1 0 0 0 trans-cinnamate 4-monooxygenase Solyc05g047550.4 11 10 3 5 0 0 0 3 2 3 0 1 1 11 12 Protein kinase domain (AHRD V3.3 *** A0A200QZ79_9MAGN) Solyc05g047560.1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** F4KHR9_ARATH) AT5G59070 Solyc05g047570.2 0 2 2 0 0 0 0 0 0 0 6 0 0 0 0 SLU58474 receptor-like protein kinase 1 Solyc05g047580.4 35 32 7 12 19 33 24 14 35 11 16 3 42 14 10 Terpene cyclase/mutase family member (AHRD V3.3 *** A0A2U1KW20_ARTAN) Solyc05g047590.4 98 477 58 365 503 460 522 458 438 647 70 321 537 218 112 Pectinesterase (AHRD V3.3 *** A0A2G3CG09_CAPCH) AT2G26440 Solyc05g047600.4 9 14 6 25 65 67 84 70 58 50 78 45 29 30 16 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A1Q3BH80_CEPFO) AT1G01140 Solyc05g047610.3 276 159 222 178 112 118 137 65 144 197 266 118 161 162 205 S-acyltransferase (AHRD V3.3 *-* A0A1U8GPH8_CAPAN) Solyc05g047640.3 287 181 179 128 146 105 105 131 216 311 207 215 148 175 165 S-acyltransferase (AHRD V3.3 *** A0A2G3CFY8_CAPCH) Solyc05g047643.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *** A0A2U1LHN9_ARTAN) Solyc05g047645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc05g047647.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc05g047670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc05g047680.4 0 0 1 2 2 8 6 10 4 11 2 25 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1MQN4_ARTAN) AT2G46660 Solyc05g047690.3 653 1098 1337 1316 1305 1509 1549 1251 957 811 1174 1110 1233 1219 1232 Histone deacetylase complex subunit SAP18 (AHRD V3.3 *** Q6V9I5_SOLCH) AT2G45640 Solyc05g047710.3 4 18 32 27 28 24 14 18 16 11 47 11 4 15 11 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1PBS7_ARTAN) AT3G61050 Solyc05g150147.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc05g150148.1 0 3 0 1 4 4 8 2 1 1 0 7 0 2 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc05g150149.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc05g150150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0WC85_9ASPA) Solyc05g048740.3 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1QNF0_ARTAN) AT2G28500 Solyc05g048750.3 2204 1949 2326 1873 2074 2272 2207 1746 1584 1493 2517 1583 2013 1948 2913 coiled-coil protein (AHRD V3.3 *-* AT2G45520.1) AT2G45520 Solyc05g048755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc05g048760.3 369 558 482 499 661 508 451 550 600 462 445 535 646 571 501 phosphomannomutase AT2G45790 Solyc05g048770.3 192 156 167 116 72 129 126 99 142 109 97 107 155 101 188 Isoaspartyl peptidase/L-asparaginase (AHRD V3.3 *** A0A2K3NS47_TRIPR) AT4G00590 Solyc05g048780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1M803_ARTAN) Solyc05g048790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1QKV8_ARTAN) Solyc05g048800.3 36 75 38 23 83 90 66 140 151 78 21 57 96 51 18 O-glucosyltransferase rumi-like protein (DUF821) (AHRD V3.3 *-* A0A178VAW3_ARATH) Solyc05g048810.4 3004 1545 848 766 586 721 703 650 676 745 472 674 805 774 893 tRNA-specific adenosine deaminase 1-like protein (AHRD V3.3 *** A0A2K3PA98_TRIPR) AT1G01760 Solyc05g048820.3 0 2 3 0 0 3 1 2 1 1 2 0 0 0 0 Remorin (AHRD V3.3 *** A0A2G3CFW0_CAPCH) Solyc05g048830.3 665 536 572 383 272 285 191 225 397 467 462 406 577 512 356 MYB transcription factor (AHRD V3.3 *-* A0A0U3IU11_MESCR) AT3G61250 Solyc05g048840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acetylornithine aminotransferase, chloroplastic/mitochondrial (AHRD V3.3 *** A0A2G3BZI2_CAPCH) Solyc05g048850.4 223 394 235 257 389 375 354 386 292 251 217 274 379 377 247 RNA helicase DEAD18 Solyc05g048860.3 37 74 64 35 33 61 66 66 64 59 29 70 47 82 16 DEAD-box ATP-dependent RNA helicase 8 (AHRD V3.3 *-* A0A2G3BT19_CAPCH) Solyc05g049860.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* A0A2K3PN47_TRIPR) Solyc05g049870.3 0 0 0 0 0 1 0 0 1 0 4 0 0 5 0 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3C877_CEPFO) AT3G61230 Solyc05g049880.3 2762 2155 2332 2043 1684 1812 1683 1792 1598 2179 2058 1799 2359 2096 2502 hypothetical protein (AHRD V3.3 *** AT1G01730.1) AT1G01730 Solyc05g049890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g049900.3 686 496 461 632 419 336 592 343 412 695 482 444 643 626 655 UPF0187 protein, chloroplastic (AHRD V3.3 *** A0A1U8GN47_CAPAN) AT3G61320 Solyc05g049910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein At5g07610-like (AHRD V3.3 *-* A0A2I4F448_9ROSI) Solyc05g049920.1 0 1 0 0 0 7 2 2 0 0 4 0 0 5 0 Unknown protein Solyc05g049930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein At5g07610-like (AHRD V3.3 *-* A0A2I4F448_9ROSI) Solyc05g049940.3 238 287 414 274 308 336 350 343 287 214 364 303 310 282 253 hypothetical protein (AHRD V3.3 *** AT1G01715.2) AT4G00525 Solyc05g049950.3 4377 8040 5695 5581 7481 6073 6963 8096 4769 5618 5660 7443 8064 7101 5080 Small nuclear ribonucleoprotein-associated protein (AHRD V3.3 *-* A0A2G2YXL6_CAPAN) AT4G20440 Solyc05g049960.4 158 231 279 286 292 378 303 321 230 193 225 314 199 276 276 ELM2 domain-containing protein (AHRD V3.3 *** A0A2U1QGB1_ARTAN) AT2G46040 Solyc05g049970.3 1383 1122 878 1130 1061 1290 1229 1169 890 1164 945 824 1086 813 1124 mitogen-activated protein kinase 6 AT4G01370 Solyc05g049980.3 151 1099 859 1372 2614 2398 2134 2411 1365 1170 660 1002 1134 818 738 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A1I9LS88_ARATH) AT3G61490 Solyc05g049990.4 606 284 185 268 496 430 289 391 321 196 216 70 347 104 200 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6R9M9_ACTCH) Solyc05g050000.3 103 149 136 93 75 92 104 61 80 68 105 72 225 144 156 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT5G51130.1) AT5G51130 Solyc05g050003.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc05g050007.1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc05g050010.3 0 0 0 0 0 0 0 0 1 0 1 2 0 0 4 1-aminocyclopropane-1-carboxylic acid synthase-4 AT1G01480 Solyc05g150151.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L3 (AHRD V3.3 *-* A0A1U8DVW7_CAPAN) Solyc05g050020.3 282 301 357 320 355 386 363 345 301 300 289 345 198 335 283 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LKS9_ARTAN) AT4G01270 Solyc05g050040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 62 Solyc05g050050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 63 Solyc05g050053.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050057.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor (AHRD V3.3 *-* E5GBD4_CUCME) Solyc05g050060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 64 Solyc05g050065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor (AHRD V3.3 --* A0A2K3L8Q1_TRIPR) Solyc05g050070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X6C6_9ASPA) Solyc05g050090.4 67 28 58 124 25 9 8 6 42 29 52 17 20 49 29 Delta(8)-fatty-acid desaturase (AHRD V3.3 *** A0A2G2WSR6_CAPBA) Solyc05g050100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050110.3 566 405 343 345 333 314 363 309 354 343 394 308 243 305 424 DUF2358 domain-containing protein (AHRD V3.3 *** A0A1Q3BPE1_CEPFO) AT2G46220 Solyc05g050120.3 4819 2742 2854 3531 1246 1107 1401 1405 4485 5641 5313 2684 2527 3197 5728 cytosolic NADP-malic enzyme Solyc05g050130.4 9167 5108 5186 3175 351 259 231 498 2902 16604 6085 2269 38167 20137 3439 Acidic endochitinase (AHRD V3.3 *** CHIA_TOBAC) AT5G24090 Solyc05g050140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050200.4 1509 1674 2448 1634 2000 1850 1902 1853 1793 1231 1689 1520 2101 1793 2403 Eukaryotic translation initiation factor 1A (AHRD V3.3 *** A0A2G3BSS7_CAPCH) AT2G04520 Solyc05g050210.4 101 238 210 223 360 365 311 467 199 175 405 168 211 186 90 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2ZIE8_CAPAN) AT4G01130 Solyc05g050213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc05g050217.1 3 0 9 6 1 1 1 2 0 3 1 5 0 2 6 Unknown protein Solyc05g050220.3 120 53 157 66 77 50 60 65 49 83 52 77 34 99 394 Common plant regulatory factor 1 (AHRD V3.3 *** A0A1U8DT23_CAPAN) AT2G46270 Solyc05g050230.4 3694 3533 2756 3398 4893 4398 4280 4939 3316 4540 2672 3439 3583 2664 2234 Ubiquitin-conjugating enzyme (AHRD V3.3 *-* Q5XUV4_WHEAT) Solyc05g050240.3 17 61 52 58 59 55 37 51 71 78 110 29 30 59 69 Plastid division protein PDV1 (AHRD V3.3 *-* A0A2I0XAI8_9ASPA) Solyc05g050250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *-* AT5G41761.1) Solyc05g050280.3 546 555 473 584 351 352 341 401 574 366 635 305 393 375 443 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1NZC8_ARTAN) AT2G46370 Solyc05g050290.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1NZC8_ARTAN) AT1G48690 Solyc05g050300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor (AHRD V3.3 *-* A0A2K3KYI6_TRIPR) Solyc05g050310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050320.4 788 447 403 412 341 344 355 333 423 491 397 360 320 389 334 Glycosyl hydrolase superfamily protein (AHRD V3.3 *** A0A2U1QD96_ARTAN) AT4G01040 Solyc05g050330.3 339 207 221 220 154 175 139 119 176 161 238 149 230 200 221 WRKY transcription factor 60 Solyc05g050340.4 447 232 341 170 14 50 55 30 139 226 302 71 423 310 217 WRKY transcription factor 58 Solyc05g050350.2 21 19 51 11 0 0 2 2 4 19 19 2 44 25 5 Cyclic nucleotide-gated ion channel 1 (AHRD V3.3 *** A0A2G3CGN2_CAPCH) Solyc05g050360.3 693 286 498 368 9 36 24 25 199 396 361 95 448 495 448 Cyclic nucleotide-gated ion channel 1 (AHRD V3.3 *** A0A2G2WSK7_CAPBA) Solyc05g050365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A1J3JSN7_NOCCA) Solyc05g050380.4 1855 799 1568 870 49 48 58 24 464 1333 1403 227 1929 1359 946 Cyclic nucleotide-gated ion channel 1 (AHRD V3.3 *** A0A2G2WSK7_CAPBA) Solyc05g050390.4 3338 1965 2358 2242 1601 1599 1623 1392 1839 2083 2552 2000 1871 1970 2611 beclin 1 AT3G61710 Solyc05g050460.1 0 0 7 0 1 0 0 0 1 0 3 1 2 1 0 Zinc finger CCCH domain-containing protein 53-like (AHRD V3.3 *-* A0A2K3PKI8_TRIPR) Solyc05g050430.2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 Plant resistance protein (AHRD V3.3 *** O81136_SOLLC) Solyc05g050470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kinase-like protein (AHRD V3.3 *-* A0A371DUL0_9APHY) Solyc05g050480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *-* A0A1P8AR63_ARATH) Solyc05g050490.4 49 59 30 40 27 38 25 35 34 53 79 76 96 93 63 ATPase (AHRD V3.3 *-* A0A2G2WSP7_CAPBA) Solyc05g050500.1 1341 1201 533 1872 1321 877 973 1934 914 1321 919 898 1118 621 535 ATP synthase delta chain chloroplastic-like (AHRD V3.3 *** A0A2K3N7F4_TRIPR) AT4G00895 Solyc05g050510.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *** A0A1U8H0U4_CAPAN) Solyc05g050515.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc05g050520.4 3 16 37 39 102 88 56 97 23 23 76 74 32 37 7 LRAT domain-containing protein (AHRD V3.3 *** A0A1Q3AS87_CEPFO) AT1G01225 Solyc05g050530.3 307 342 387 346 384 375 361 296 364 274 341 399 336 421 496 Pyridoxine/pyridoxamine 5'-phosphate oxidase 2 (AHRD V3.3 *** A0A1U8GPA2_CAPAN) AT2G46580 Solyc05g050540.4 35 200 222 240 226 253 228 265 334 67 244 204 154 271 367 Laccase (AHRD V3.3 *** K4C186_SOLLC) AT2G46570 Solyc05g050550.4 242 263 198 538 162 157 162 227 183 240 239 204 303 194 325 hypothetical protein (AHRD V3.3 *** AT5G53030.1) AT4G00950 Solyc05g050555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc05g050560.1 305 423 628 317 240 326 305 268 205 292 256 199 279 315 196 Transcription factor bHLH13 (AHRD V3.3 *** A0A2G3B2W8_CAPCH) AT1G01260 Solyc05g050570.3 87 100 114 110 113 111 97 117 85 37 69 90 138 124 81 Cyclic pyranopterin monophosphate synthase accessory protein (AHRD V3.3 *** A0A2G2WSM4_CAPBA) AT1G01290 Solyc05g050580.3 661 575 986 1004 766 760 730 647 1042 633 1003 871 691 782 800 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G2WSD8_CAPBA) Solyc05g050590.3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 phosphatidylinositol 4-kinase gamma 4-like (AHRD V3.3 *** A0A2I4FK44_9ROSI) AT2G46500 Solyc05g050600.3 1133 1757 1628 1437 1904 1549 1488 1994 1631 1432 1502 1547 2198 1615 1279 Dynamin-like protein (AHRD V3.3 *** F4K015_ARATH) AT5G42080 Solyc05g050630.4 1239 1454 1694 2142 1270 1546 1834 1452 1471 1371 1515 1389 966 1696 1646 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1QFM4_ARTAN) AT1G01320 Solyc05g050620.2 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 Unknown protein Solyc05g050640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain protein (AHRD V3.3 -** AT5G26805.1) AT5G26805 Solyc05g050650.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oleosin 14.9 kDa (AHRD V3.3 *-* A0A2G3CHZ7_CAPCH) AT1G78640 Solyc05g050670.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kinase-like protein (AHRD V3.3 *** A0A371DUL0_9APHY) Solyc05g050680.4 968 1162 1174 1087 1063 1288 1260 991 865 963 1076 924 1359 1336 1283 Casein kinase II subunit beta (AHRD V3.3 *** A0A2G2ZIS6_CAPAN) AT2G44680 Solyc05g050685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050690.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat protein (AHRD V3.3 *** A0A0A6ZKK7_PETHY) AT3G59510 Solyc05g050710.3 53 62 57 53 113 100 90 105 90 47 83 57 36 60 87 Lecithin-cholesterol acyltransferase-like 1 (AHRD V3.3 *** A0A2G2WT15_CAPBA) AT1G27480 Solyc05g050720.4 332 300 285 326 272 241 314 247 274 304 246 278 227 243 323 transmembrane protein (AHRD V3.3 *-* AT4G38490.1) Solyc05g050730.1 2 6 1 11 1 7 8 4 3 4 5 11 8 5 3 Stigma-specific Stig1 family protein (AHRD V3.3 *** A0A2U1LAF4_ARTAN) AT4G26880 Solyc05g050740.3 1257 636 509 619 534 607 494 542 508 659 470 593 329 417 493 dentin sialophosphoprotein isoform X2 (AHRD V3.3 *-* XP_023890879.1) Solyc05g050750.1 2 1 0 0 3 0 9 3 2 0 0 3 3 0 0 Calmodulin-like protein 5 (AHRD V3.3 *** A0A2G2WT11_CAPBA) AT3G07490 Solyc05g050760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transferase (AHRD V3.3 *-* A0A200PME0_9MAGN) Solyc05g050770.4 46 235 51 99 51 58 79 43 194 129 96 89 105 49 181 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3LD91_TRIPR) Solyc05g050780.3 0 1 3 0 0 0 0 0 5 8 13 8 5 1 0 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3MSK4_TRIPR) AT2G23000 Solyc05g050790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor 1 (AHRD V3.3 *** A0A2G2WT19_CAPBA) Solyc05g050800.3 528 685 1527 878 718 678 738 771 778 1064 1226 536 1141 818 583 Phosphoglycerate mutase family protein (AHRD V3.3 *** A0A1I9LN21_ARATH) AT3G60450 Solyc05g050810.4 24 14 27 21 4 1 3 7 4 11 9 4 13 14 28 DnaJ protein (AHRD V3.3 *-* Q9ZSZ6_HEVBR) Solyc05g050820.3 134 93 144 70 12 22 22 14 32 38 28 30 71 89 126 DnaJ homolog (AHRD V3.3 *** Q9ZWK3_SALGI) Solyc05g050825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc05g050830.3 54 46 65 137 32 14 19 23 72 105 87 61 93 19 37 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2WT45_CAPBA) AT2G44940 Solyc05g050840.3 1512 729 843 753 682 658 550 580 588 780 429 792 936 583 695 flocculation protein FLO11-like (AHRD V3.3 *** XP_004240058.1) Solyc05g050850.3 753 974 1149 849 891 906 956 998 748 837 1060 833 1310 1118 1264 Unknown protein Solyc05g050860.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 *** A0A200Q877_9MAGN) AT1G02040 Solyc05g050870.4 0 1 0 2 0 1 0 5 0 3 0 5 3 0 0 Peroxidase (AHRD V3.3 *** K4C1C0_SOLLC) Solyc05g050880.2 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4C1C0_SOLLC) Solyc05g050883.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g050887.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc05g050890.3 4 0 0 6 0 1 0 0 0 0 0 8 0 0 0 Peroxidase (AHRD V3.3 *-* A0A0V0HJQ8_SOLCH) Solyc05g050895.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc05g050900.4 333 542 866 664 713 649 691 615 416 461 583 583 453 577 399 Spindle and kinetochore-associated protein 1-like protein (AHRD V3.3 *** A0A2G2WSY2_CAPBA) AT3G60660 Solyc05g050910.3 150 75 90 163 102 121 121 112 94 91 151 115 68 116 128 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G3CEB6_CAPCH) Solyc05g050920.3 115 100 126 114 143 107 87 96 126 180 171 107 192 142 63 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G3CEB6_CAPCH) Solyc05g050930.2 445 262 194 220 302 246 237 303 304 314 256 253 231 200 213 DUF641 domain-containing protein (AHRD V3.3 *** A0A1Q3BV63_CEPFO) AT3G60680 Solyc05g050940.4 318 281 339 324 322 323 385 340 250 237 336 311 326 310 316 tRNA N6-adenosine threonylcarbamoyltransferase (AHRD V3.3 *** A0A248JMK1_9PROT) AT2G45270 Solyc05g050950.2 12 23 40 26 14 27 24 31 26 36 11 54 17 18 17 DNA repair protein RAD51-like protein 3 (AHRD V3.3 *-* A0A2G3CFM9_CAPCH) Solyc05g050960.4 82 48 102 107 111 127 144 91 64 76 94 85 67 83 53 DNA repair protein RAD51 (AHRD V3.3 *** B6TPY8_MAIZE) AT2G45280 Solyc05g050970.4 2323 3123 2569 2864 3149 2874 2924 3569 3953 3181 2365 3144 3234 3621 2893 Transketolase (AHRD V3.3 *** A0A200R9X0_9MAGN) AT3G60750 Solyc05g050980.3 587 1141 869 981 1501 1549 1311 1742 1340 927 585 1302 965 1095 711 3-phosphoshikimate 1-carboxyvinyltransferase (AHRD V3.3 *** A0A0M8KSM3_NICAT) AT2G45300 Solyc05g050990.1 164 205 332 250 463 426 468 363 285 257 373 311 165 229 156 UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** A0A1J3F7T2_NOCCA) AT4G00110 Solyc05g051000.3 1167 3017 2102 2115 2249 2460 2659 2074 1494 1203 1687 1604 3590 2981 1776 40S ribosomal protein S13 (AHRD V3.3 *** A0A2I0X2R1_9ASPA) AT4G00100 Solyc05g051010.4 2 26 62 29 64 28 37 51 36 43 59 16 10 10 44 Dihydroflavonol-4-reductase (AHRD V3.3 *** A0A2K3N028_TRIPR) AT2G45400 Solyc05g051030.3 710 428 482 561 335 484 416 322 313 415 527 376 362 354 523 Protein cornichon-like protein 4 (AHRD V3.3 *** A0A2G2WSR4_CAPBA) Solyc05g051040.4 1116 868 811 775 620 711 680 593 641 757 722 687 933 798 828 RING/U-box superfamily protein (AHRD V3.3 *** Q93YQ5_ARATH) AT1G12760 Solyc05g051050.3 814 595 614 557 494 535 490 562 581 692 609 636 446 640 679 Shaggy-related protein kinase theta (AHRD V3.3 *** A0A1U8GW94_CAPAN) AT4G00720 Solyc05g051060.3 556 645 758 835 859 776 780 800 764 651 781 814 759 758 572 Homeodomain-like superfamily protein (AHRD V3.3 *** A0A2U1PJR7_ARTAN) AT5G16560 Solyc05g051070.3 998 886 1024 619 868 918 690 918 880 742 911 849 957 853 944 Pre-mRNA-splicing factor ISY1-like protein (AHRD V3.3 *** A0A2G2WT09_CAPBA) AT3G18790 Solyc05g051080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oleosin 14.9 kDa (AHRD V3.3 *-* A0A2G3CHZ7_CAPCH) AT5G26805 Solyc05g051090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oleosin 14.9 kDa (AHRD V3.3 *-* A0A2G3CHZ7_CAPCH) AT5G26805 Solyc05g051100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1-like protein 1 (AHRD V3.3 *-* A0A2G2V0A0_CAPBA) Solyc05g051120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oleosin 14.9 kDa (AHRD V3.3 *** A0A2G3CHZ7_CAPCH) AT5G26805 Solyc05g051140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FLOWERING locus D-like protein (AHRD V3.3 *-* A0A1I9LNW7_ARATH) Solyc05g051150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1-like protein 1 (AHRD V3.3 *-* A0A2G3BES3_CAPCH) Solyc05g051153.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1-like protein 1 (AHRD V3.3 *-* A0A2G3BES3_CAPCH) Solyc05g051157.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1 like 1 (AHRD V3.3 *-* A0A2I0XG51_9ASPA) Solyc05g051160.1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 B3 domain protein (AHRD V3.3 -** AT1G51970.1) AT5G26805 Solyc05g051180.3 0 2 0 3 0 0 0 0 2 0 0 0 5 0 0 Ethylene-responsive transcription factor 1B (AHRD V3.3 *-* A0A2G2ZIK8_CAPAN) Solyc05g051190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein BOBBER 1 (AHRD V3.3 *-* A0A2G3D107_CAPCH) Solyc05g051200.1 665 278 121 215 8 2 3 4 135 249 246 34 120 101 351 ethylene-responsive factor 1 Solyc05g051210.3 1 3 0 1 0 0 0 0 0 5 0 0 0 10 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* Q9M144_ARATH) Solyc05g051220.3 25 5 10 37 10 20 13 27 14 24 43 20 17 13 15 Potassium channel GORK (AHRD V3.3 *** A0A1U8GYE0_CAPAN) AT3G02850 Solyc05g051230.4 2524 2072 1918 2089 1622 1780 1894 1634 1716 1687 1656 1586 1961 2382 1944 tRNA threonylcarbamoyladenosine dehydratase (AHRD V3.3 *** A0A2I4EB61_9ROSI) AT5G37530 Solyc05g051240.1 1823 1847 3223 2411 1176 1409 1238 764 2197 2488 3582 2541 1769 1704 3240 aspartic proteinase PCS1 (AHRD V3.3 *** A0A1U8GYE6_CAPAN) AT5G37540 Solyc05g051250.3 27 42 97 76 63 54 60 34 52 30 54 95 31 44 132 Glutamine synthetase (AHRD V3.3 *** A0A1U8GYF5_CAPAN) Solyc05g051260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1,4-beta-xylanase (AHRD V3.3 *** B6THX1_MAIZE) Solyc05g051270.3 39 76 108 63 157 131 122 111 69 47 117 87 69 113 117 Cysteine-rich repeat secretory protein 60 (AHRD V3.3 *** A0A2G2VDA1_CAPBA) AT5G37660 Solyc05g051280.3 604 648 836 1146 646 937 819 656 804 507 1015 914 627 811 819 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NG96_ARTAN) AT5G37710 Solyc05g051290.4 2519 2599 4473 2699 5968 5704 3924 5989 3752 5969 4710 7314 1134 2392 1318 HMG-Y-related protein A-like (AHRD V3.3 *** A0A1U8GPJ7_CAPAN) Solyc05g051300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DELLA protein GAI (AHRD V3.3 *-* XP_004249633.3) Solyc05g051310.1 21 14 21 18 11 5 13 17 23 16 22 13 22 16 4 Ethylene-responsive transcription factor 5 (AHRD V3.3 *-* ERF5_NICSY) Solyc05g051320.2 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 Per1-like (AHRD V3.3 *** A0A200PW77_9MAGN) Solyc05g051330.1 229 89 95 93 86 128 74 93 91 134 106 107 127 154 98 DNA-binding storekeeper transcriptional regulator (AHRD V3.3 *-* A0A2K3NPC0_TRIPR) Solyc05g051340.3 339 279 269 503 327 275 336 342 298 417 214 376 184 368 183 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WS88_9ASPA) AT1G66345 Solyc05g051345.1 65 31 82 43 37 62 75 66 60 40 34 38 60 49 112 transmembrane protein (AHRD V3.3 *-* AT4G16180.2) Solyc05g051350.2 1 0 0 0 0 0 0 0 1 1 0 2 0 2 0 Rhamnogalacturonate lyase (AHRD V3.3 *** A0A200QXQ6_9MAGN) Solyc05g051360.1 4 9 1 0 17 2 3 9 0 0 0 4 2 6 0 Glycosyltransferase (AHRD V3.3 *** A0A2U1PXH3_ARTAN) Solyc05g051370.3 1302 957 954 970 951 744 912 927 940 1000 896 1007 1019 915 897 transcription initiation factor TFIID subunit (AHRD V3.3 *** AT5G65540.1) AT5G65540 Solyc05g051380.4 152 633 1240 651 945 1315 809 1129 832 477 1005 1302 457 855 542 AP2-like ethylene-responsive transcription factor AIL6 (AHRD V3.3 *** A0A2G3CG18_CAPCH) AT5G10510 Solyc05g051385.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc05g051390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Kinase-interacting protein 1 (AHRD V3.3 *** A0A2G2WT60_CAPBA) AT2G22560 Solyc05g051400.4 584 466 828 402 341 423 323 293 685 242 1637 425 534 568 1374 Mitochondrial uncoupling protein 6 (AHRD V3.3 *** A0A2G3CG15_CAPCH) AT2G22500 Solyc05g051410.3 208 280 323 323 475 571 456 472 269 187 419 287 287 298 372 cyclinD4_2 Solyc05g051420.2 33 52 57 67 88 58 71 58 49 47 89 85 62 47 21 zinc-finger homeodomain protein 1-like (AHRD V3.3 *** A0A2I4FF48_9ROSI) Solyc05g051425.2 44 18 0 17 15 1 2 3 21 2 9 3 8 7 3 Dihydrofolate reductase-like protein (AHRD V3.3 *** A0A2K3MS55_TRIPR) Solyc05g051440.1 1 13 6 16 0 2 6 1 63 12 119 6 86 31 111 Protein MIZU-KUSSEI 1 (AHRD V3.3 *** A0A1J3G0C0_NOCCA) AT5G65340 Solyc05g051450.2 8 0 6 3 0 0 1 0 19 1 14 3 4 5 6 Unknown protein Solyc05g051460.3 144 520 500 553 969 1075 1072 991 1146 522 902 873 1073 841 877 Homeobox-leucine zipper protein HOX4 (AHRD V3.3 *** A0A2G2Y5D1_CAPAN) AT2G22430 Solyc05g051470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g051480.2 114 42 25 43 0 0 2 1 15 14 57 10 37 33 65 Unknown protein Solyc05g051490.3 503 380 528 399 341 339 327 284 383 431 525 392 371 414 494 LMBR1 domain-containing protein (AHRD V3.3 *** A0A1Q3CSD8_CEPFO) AT5G65290 Solyc05g051495.1 10 1 19 3 15 1 2 0 1 5 0 0 2 3 3 Unknown protein Solyc05g051500.4 4982 4697 4972 5460 5463 6337 5432 5982 4799 5122 5094 6056 5764 4897 3863 Histone H3 (AHRD V3.3 *** A0A2K1J132_PHYPA) AT4G40040 Solyc05g051510.4 165 351 289 217 265 257 209 254 325 261 235 296 641 405 221 Prohibitin (AHRD V3.3 *** O04361_TOBAC) AT5G40770 Solyc05g051520.3 757 687 410 426 435 474 521 459 407 332 401 424 568 650 528 S-adenosyl-L-methionine-dependent methyltransferase (AHRD V3.3 *** A0A2P4QYI9_RHIID) AT2G22400 Solyc05g051530.4 12 7 6 18 16 26 14 21 4 8 31 26 13 17 16 ABC transporter G family member 11 (AHRD V3.3 *** A0A2G2ZJ77_CAPAN) Solyc05g051540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter G family member 11 (AHRD V3.3 *-* A0A2G2WTG8_CAPBA) Solyc05g051545.1 107 136 113 175 138 138 144 124 85 57 143 84 208 84 34 EPIDERMAL PATTERNING FACTOR-like protein 1 (AHRD V3.3 *** A0A2G2ZJC2_CAPAN),Pfam:PF17181 Solyc05g051550.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB transcription factor (AHRD V3.3 *-* A0A0U3IU11_MESCR) AT5G65230 Solyc05g051560.4 195 216 247 217 242 390 250 206 268 189 249 290 209 259 315 Mitochondrial substrate carrier family protein (AHRD V3.3 *** A0A1P8BDA7_ARATH) Solyc05g051570.3 125 122 139 93 130 113 90 95 102 178 155 92 161 118 113 Rab family GTPase (AHRD V3.3 *** A0A1Y1IFP9_KLENI) AT5G10260 Solyc05g051580.3 116 91 21 104 11 28 5 4 72 48 9 36 109 48 34 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A1P8BAS4_ARATH) AT5G10250 Solyc05g051590.3 904 606 634 852 543 706 782 529 509 671 714 564 719 712 774 CMP-sialic acid transporter 5 (AHRD V3.3 *** A0A2I4FS56_9ROSI) AT5G65000 Solyc05g051583.1 90 53 56 102 3 10 9 7 25 59 34 30 50 16 29 F-box family protein (AHRD V3.3 *** A0A2U1L823_ARTAN) AT5G07610 Solyc05g051595.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200R982_9MAGN) Solyc05g051610.3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *** A0A200Q2H7_9MAGN) AT4G25160 Solyc05g051620.3 237 245 316 335 353 281 314 412 383 272 243 371 228 197 151 RNA polymerase III RPC4 (AHRD V3.3 *** A0A2U1QBZ9_ARTAN) AT5G09380 Solyc05g051630.4 736 618 710 670 621 696 840 520 548 472 667 583 554 610 885 RFT1 (AHRD V3.3 *** A0A200RCA1_9MAGN) AT5G07630 Solyc05g051640.4 89 252 224 237 246 315 271 300 284 128 166 226 264 296 445 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A2R6PLW3_ACTCH) Solyc05g051660.1 1050 673 514 600 202 179 176 227 676 699 768 473 402 383 1295 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KK17_ARTAN) Solyc05g051680.4 1123 847 997 737 736 730 750 720 918 683 756 930 638 1056 939 Structural maintenance of chromosomes protein 6 (AHRD V3.3 *** A0A2G2WTI5_CAPBA) AT5G61460 Solyc05g051690.3 193 276 367 241 327 312 311 264 293 218 318 269 364 289 251 Cell number regulator 6 (AHRD V3.3 *** A0A2G2WTF0_CAPBA) AT2G45010 Solyc05g051700.3 454 462 512 629 591 706 680 612 565 615 557 570 542 510 480 Iron-sulfur assembly protein IscA, chloroplastic (AHRD V3.3 *** A0A1U8GYV7_CAPAN) AT1G10500 Solyc05g051710.4 61 92 51 70 55 34 25 26 56 34 28 29 27 38 21 sorbin/SH3 domain protein (AHRD V3.3 *** AT5G09960.1) AT5G09960 Solyc05g051720.1 4 0 0 3 0 0 0 0 0 0 0 0 0 1 0 Monothiol glutaredoxin-S1 (AHRD V3.3 *** A0A2G3CHH3_CAPCH) AT1G03020 Solyc05g051730.1 0 1 3 9 0 0 0 0 7 3 8 1 3 1 11 Monothiol glutaredoxin-S6 (AHRD V3.3 *** A0A2G3CHF0_CAPCH) AT1G03020 Solyc05g051735.1 105 69 75 120 138 95 81 67 77 96 92 85 124 62 102 Unknown protein Solyc05g051750.3 585 351 258 471 39 65 101 44 122 182 326 234 131 121 195 TOMPRORNA prosystemin Solyc05g051760.2 22 5 9 7 1 5 4 0 2 8 26 7 4 3 0 protein MIZU-KUSSEI 1-like (AHRD V3.3 *** A0A2I4H434_9ROSI) AT2G21990 Solyc05g051770.3 413 360 246 394 428 366 431 502 349 395 326 355 402 360 325 transmembrane protein (AHRD V3.3 *** AT5G09995.2) AT5G09995 Solyc05g051780.4 182 217 330 190 342 409 427 377 625 226 311 327 573 416 246 Gamma-glutamyltranspeptidase 1 (AHRD V3.3 *** A0A2G2WRQ3_CAPBA),Pfam:PF01019 AT4G39640 Solyc05g051790.3 1093 1214 1139 980 1278 1409 1366 1312 884 832 944 986 1473 1183 1010 DNA-directed RNA polymerase, RPB5 subunit (AHRD V3.3 *** A0A2U1MFI7_ARTAN) AT3G22320 Solyc05g051800.3 325 129 232 154 94 85 101 70 130 222 216 129 160 182 157 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NLT0_ARTAN) Solyc05g051810.1 0 0 4 1 0 0 0 0 2 0 2 0 0 0 0 Unknown protein Solyc05g051815.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g051820.3 229 51 215 204 4 8 2 1 94 187 684 98 84 92 599 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6R672_ACTCH) AT4G39700 Solyc05g051825.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A0A2K3PNN3_TRIPR) AT2G26320 Solyc05g051830.4 6 5 8 13 0 0 1 0 4 28 31 12 3 4 0 Agamous-like MADS-box protein AGL104 (AHRD V3.3 --* AG104_ARATH) Solyc05g051840.1 2782 3849 2353 2696 3293 2521 2313 3476 2585 3353 2341 3516 2977 2984 2257 Trafficking protein particle complex subunit 12-like protein (AHRD V3.3 *** A0A2K3MXS8_TRIPR) AT4G39820 Solyc05g051850.3 1416 1602 507 1387 1025 1016 872 1018 906 1196 356 794 3349 637 577 putative myo-inositol-1-phosphatase AT5G10170 Solyc05g051870.3 47 337 401 238 356 221 359 234 203 173 479 133 186 140 422 Pollen Ole e 1 allergen/extensin (AHRD V3.3 *** A0A200QVY0_9MAGN),Pfam:PF01190 Solyc05g051875.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Ethylene insensitive 3-like protein (AHRD V3.3 *** A0A2K3N8Y3_TRIPR) AT5G10120 Solyc05g051880.4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Trehalose 6-phosphate phosphatase (AHRD V3.3 *** A0A1U8F1Y8_CAPAN) Solyc05g051890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q84VP8_ARATH) AT2G22180 Solyc05g051900.3 870 153 209 156 174 181 160 220 131 573 353 224 133 139 238 Major facilitator superfamily (AHRD V3.3 *** A0A200QUR2_9MAGN) AT5G10190 Solyc05g051920.3 0 0 0 3 0 0 0 0 7 5 0 0 5 0 0 Major facilitator superfamily (AHRD V3.3 *** A0A200QUR2_9MAGN) Solyc05g051940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Major facilitator superfamily (AHRD V3.3 *** A0A200QUR2_9MAGN) Solyc05g051950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily (AHRD V3.3 *** A0A200QUR2_9MAGN) Solyc05g051960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 *-* Q9C5L6_ARATH) Solyc05g051970.4 144 94 82 113 88 125 120 80 92 131 129 175 73 98 48 Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2 (AHRD V3.3 *** A0A2G2X511_CAPBA) Solyc05g051990.3 1788 2032 1782 2611 2095 1886 2405 2333 1306 2152 1560 1876 2267 1909 1462 Unknown protein Solyc05g052010.2 2531 3220 2201 3122 3108 2777 3188 3517 1835 2879 2140 2479 3176 2637 1715 Unknown protein Solyc05g052015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g052020.3 861 340 338 287 167 195 174 154 309 383 331 255 328 310 468 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NKR4_ARTAN) AT5G51180 Solyc05g052030.1 4732 2188 2344 3321 328 402 473 445 1735 5390 2923 1161 981 1246 1063 ethylene response factor 4 AT5G07580 Solyc05g052040.1 2684 1200 1445 215 8 11 6 11 206 203 2487 313 401 720 1651 ripening regulated protein DDTFR10/A AT5G51190 Solyc05g052050.1 840 616 754 174 39 29 53 26 309 1166 961 121 287 283 234 DNA-binding protein Pti4 AT4G17500 Solyc05g052070.3 1699 1101 1175 1230 1189 1086 1130 1003 1053 1278 1355 1048 1040 1003 1364 small GTP-binding protein C AT1G02130 Solyc05g052080.1 0 0 0 0 5 0 2 0 0 0 0 0 1 0 0 Transmembrane protein (AHRD V3.3 *-* Q1PDZ2_ARATH) AT5G07490 Solyc05g052090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 glycine-rich protein (AHRD V3.3 --* AT5G61660.1) Solyc05g052100.3 264 429 389 412 481 443 469 535 598 431 403 612 620 559 395 Glutamate dehydrogenase (AHRD V3.3 *** A0A1U8GQ51_CAPAN) Solyc05g052110.3 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A1U8GZ07_CAPAN) AT1G69940 Solyc05g052120.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G2WTI6_CAPBA) AT1G69940 Solyc05g052130.3 6 16 25 26 2 3 2 3 3 4 43 1 12 6 19 Metacaspase-1 (AHRD V3.3 *** A0A2G3CHC8_CAPCH),Pfam:PF00656 Solyc05g052140.3 1128 1559 1451 1641 2084 1924 2016 1745 1071 1155 1738 1155 1692 1386 1559 ATP synthase subunit delta', mitochondrial (AHRD V3.3 *** A0A2G2WIK8_CAPBA) Solyc05g052150.4 673 1024 616 601 989 838 729 1481 983 1148 447 833 1088 803 664 ATP synthase subunit delta', mitochondrial (AHRD V3.3 *-* ATP4_IPOBA) Solyc05g052160.4 669 636 435 532 503 443 475 521 531 436 448 447 601 591 525 Translocase of chloroplast (AHRD V3.3 *** A0A2G2ZJN6_CAPAN) AT5G05000 Solyc05g052170.4 458 287 276 203 208 237 265 213 178 314 366 273 241 303 301 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** AT4G19985.5) AT4G19985 Solyc05g052180.3 181 231 255 203 206 209 230 183 203 160 170 191 332 211 224 Nucleic acid-binding, OB-fold-like protein (AHRD V3.3 *** A0A2U1QJX0_ARTAN) AT2G40780 Solyc05g052190.4 1056 1015 1270 1135 938 1183 1166 956 961 857 1187 995 1069 1204 1094 Transcription elongation factor TFIIS (AHRD V3.3 *** A0A2G2ZJJ8_CAPAN) AT2G38560 Solyc05g052200.4 1514 1590 1425 1314 1425 1315 1463 1451 1301 1353 1190 1249 1473 1619 1832 Protein kinase family protein with ARM repeat domain-containing protein (AHRD V3.3 *** A0A2U1MUT4_ARTAN) AT2G40730 Solyc05g052210.3 309 118 138 117 63 86 91 73 76 106 249 76 202 168 143 transmembrane protein (AHRD V3.3 *-* AT3G51580.1) Solyc05g052220.3 367 351 348 375 251 301 285 260 284 328 494 246 417 343 398 U-box domain-containing protein 62 (AHRD V3.3 *** A0A2G2WTN1_CAPBA) AT5G05230 Solyc05g052230.1 0 0 0 0 1 6 5 5 2 0 0 3 0 0 0 Unknown protein Solyc05g052240.3 404 537 242 353 360 308 327 265 849 463 287 605 760 390 268 Chalcone-flavonone isomerase family protein (AHRD V3.3 *** A0A2G2ZJB2_CAPAN) AT5G05270 Solyc05g052250.3 0 0 0 0 2 4 2 4 4 2 1 3 8 5 0 Expansin (AHRD V3.3 *** K4C1Q6_SOLLC) AT2G40610 Solyc05g052260.3 663 549 570 526 396 437 484 420 320 453 339 370 565 537 372 O-acetyl-ADP-ribose deacetylase (Regulator of RNase III) (AHRD V3.3 *** A0A318DU47_9GAMM) AT2G40600 Solyc05g052265.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g052270.3 1597 1025 768 1063 1039 1251 1059 1100 1104 1283 871 1020 736 1000 1297 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2ZJA2_CAPAN) Solyc05g052275.1 282 191 167 148 188 227 149 209 245 275 149 208 115 135 116 Unknown protein Solyc05g052280.3 266 122 92 142 154 133 96 160 154 128 113 124 170 181 223 Peroxidase (AHRD V3.3 *** K4C1Q9_SOLLC) AT5G05340 Solyc05g052290.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2U1QE56_ARTAN) Solyc05g052300.4 110 123 434 326 48 50 49 45 229 159 849 107 217 144 626 Amino acid transporter (AHRD V3.3 *** S8C1J4_9LAMI) AT3G56200 Solyc05g052310.3 591 511 424 426 388 347 294 378 610 416 475 496 602 523 529 Alpha-soluble NSF attachment protein (AHRD V3.3 *** A0A1U8GZ48_CAPAN),Pfam:PF14938 Solyc05g052320.4 1 8 3 24 1 10 11 5 4 4 6 8 4 12 3 cation/H(+) antiporter 3-like (AHRD V3.3 *** A0A2I4EAA6_9ROSI) Solyc05g052330.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Beta-expansin-like protein (AHRD V3.3 *** Q9AXE4_TOBAC) Solyc05g052340.4 1 0 14 4 2 0 2 1 3 0 0 0 0 1 5 Laccase (AHRD V3.3 *** K4C1R5_SOLLC) AT5G05390 Solyc05g052350.3 409 528 354 501 431 646 567 438 482 345 412 474 275 360 265 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A2R6PLL3_ACTCH) AT3G51740 Solyc05g052360.2 5 1 1 6 1 2 0 0 1 0 0 1 0 0 0 Laccase (AHRD V3.3 *-* A0A2G2ZJK7_CAPAN) Solyc05g052370.3 52 7 8 6 6 3 3 1 7 29 17 11 11 15 15 Laccase (AHRD V3.3 *** M1CL08_SOLTU) Solyc05g052390.3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Laccase (AHRD V3.3 *** K4C1S0_SOLLC) AT5G05390 Solyc05g052400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 Laccase (AHRD V3.3 *** K4C1S1_SOLLC) AT5G05390 Solyc05g052410.3 77 37 50 39 1 8 10 12 56 24 105 84 39 38 82 Dehydration-responsive element-binding protein 2A (AHRD V3.3 *** A0A1U8GX89_CAPAN) AT5G05410 Solyc05g052420.3 0 1 0 0 2 0 0 1 3 0 0 0 0 0 0 Abscisic acid receptor PYL6 (AHRD V3.3 *-* A0A1U8GQ86_CAPAN) Solyc05g052430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein trichome birefringence-like 33 (AHRD V3.3 *** A0A2I4EQL4_9ROSI) Solyc05g052440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 32 (AHRD V3.3 *** A0A2G3CHW4_CAPCH) Solyc05g052450.3 25 35 19 21 32 7 25 13 13 27 37 16 33 28 39 Protein trichome birefringence-like 32 (AHRD V3.3 *** A0A1U8GQI0_CAPAN) Solyc05g052460.3 126 258 214 316 373 479 419 292 215 218 268 258 312 347 214 autophagy-like protein (AHRD V3.3 *** AT2G40316.1) AT2G40316 Solyc05g052470.3 1908 989 870 948 791 790 757 713 863 1018 962 839 1026 1030 1405 Ferritin (AHRD V3.3 *** A0A2G3CHZ4_CAPCH) AT3G11050 Solyc05g052480.4 729 796 690 683 904 924 824 847 867 849 600 823 1064 869 693 Histidine phosphatase superfamily (AHRD V3.3 *-* A0A200PX47_9MAGN) Solyc05g052490.3 310 500 771 726 575 720 754 603 552 518 670 423 526 509 631 Nucleoside phosphatase GDA1/CD39 (AHRD V3.3 *** A0A200PX71_9MAGN) AT4G19180 Solyc05g052500.4 305 559 466 574 560 533 582 570 551 609 599 430 539 465 813 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A1I9LPV2_ARATH) AT2G40280 Solyc05g052510.4 3291 4614 3754 3777 3626 3794 4163 4240 5200 4073 3289 3412 4246 4556 4484 Clathrin heavy chain (AHRD V3.3 *** A0A2G2WTL3_CAPBA) AT3G11130 Solyc05g052520.3 391 226 158 161 84 77 62 54 145 153 1130 211 143 230 361 Protein phosphatase 2C (AHRD V3.3 *** O24078_MEDSA) Solyc05g052530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoglucanase (AHRD V3.3 *** A0A078IE75_BRANA) Solyc05g052540.2 0 1 0 2 0 3 0 2 1 0 1 0 4 0 3 Protein trichome birefringence-like 28 (AHRD V3.3 *** A0A1J3JX20_NOCCA) Solyc05g052550.1 2169 1022 2161 676 375 399 518 281 688 523 4156 1243 851 784 1893 Zinc finger CCCH domain-containing protein 47 (AHRD V3.3 *-* A0A1U8GQ71_CAPAN) Solyc05g052560.1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g052570.3 4339 2791 2838 1316 726 871 696 701 1732 1210 5408 2926 1578 1370 3612 Zinc finger transcription factor 39 Solyc05g052580.3 565 648 807 714 977 754 762 743 696 631 638 645 778 583 579 CTD small phosphatase-like protein (AHRD V3.3 *** A0A1J3CDK2_NOCCA) AT3G55960 Solyc05g052590.1 245 153 245 233 182 195 153 218 272 222 148 224 199 204 218 Pkinase domain-containing protein (AHRD V3.3 *** A0A1Q3DF19_CEPFO) AT3G55950 Solyc05g052600.4 839 1597 607 870 1124 981 1076 1325 1336 1311 645 1073 1076 745 733 Sedoheptulose-1,7-bisphosphatase, chloroplastic (AHRD V3.3 *-* A0A1U8GZ15_CAPAN) Solyc05g052610.3 964 341 263 405 146 181 113 125 220 273 283 153 322 303 527 Transcription factor DIVARICATA (AHRD V3.3 *** A0A1U8GX57_CAPAN) AT3G11280 Solyc05g052620.4 2111 1396 1154 1568 1181 1349 1333 1196 1012 1324 1131 1069 1388 1076 1433 Coronatine-insensitive 1 AT2G39940 Solyc05g052630.4 6208 4235 4187 8025 4174 4897 6396 3402 3930 3651 5374 4505 3656 4239 6898 flocculation protein (AHRD V3.3 *** AT2G39950.8) AT2G39950 Solyc05g052640.3 1071 861 1182 1332 1988 2169 2185 1428 1241 940 1505 1240 885 1009 1433 Peroxisomal nicotinamide adenine dinucleotide carrier (AHRD V3.3 *** A0A1U8GQE9_CAPAN) AT2G39970 Solyc05g052650.2 2 5 8 4 0 4 1 1 6 6 4 5 6 3 13 HXXXD-type acyl-transferase family protein (AHRD V3.3 *-* V5PZN5_9CARY) Solyc05g052660.1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 Unknown protein Solyc05g052670.1 11 3 44 3 0 0 0 1 1 8 17 0 0 31 3 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** V5PZN5_9CARY) AT2G39980 Solyc05g052680.1 8 7 17 27 17 23 22 30 44 13 38 25 18 15 5 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** V5PZN5_9CARY) AT2G39980 Solyc05g052690.4 853 1011 1094 812 1059 1023 1092 983 789 733 685 918 1050 969 975 Eukaryotic translation initiation factor 3 subunit F (AHRD V3.3 *** A0A1U8GMA9_CAPAN) AT2G39990 Solyc05g052700.4 148 273 222 250 174 266 261 244 217 179 125 160 252 268 208 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** Q9SD65_ARATH) Solyc05g052710.3 273 1041 1323 1177 1419 1427 1632 1589 1099 832 986 1183 948 1202 975 30S ribosomal protein S31, chloroplastic (AHRD V3.3 *** A0A1U8GYZ2_CAPAN) AT2G38140 Solyc05g052720.1 118 127 200 202 257 240 226 189 141 211 236 141 111 119 233 pleckstrin homology domain-containing protein 1-like (AHRD V3.3 *** A0A2I4ER73_9ROSI) AT5G05710 Solyc05g052715.1 1976 1687 1803 1917 2264 2383 2205 2342 1926 2484 2320 1980 1754 1864 1720 flocculation protein FLO11-like (AHRD V3.3 *-* A0A2I4DGW8_9ROSI) AT2G40070 Solyc05g052740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4I629_ARATH) Solyc05g052750.3 46 43 90 63 20 26 18 21 23 41 97 25 50 51 79 Alpha/beta hydrolase related protein (AHRD V3.3 *** Q8GZ10_ARATH) AT2G40095 Solyc05g052760.4 3482 1725 2029 2057 1476 1539 1475 1494 2152 2633 2613 2062 1505 1695 3265 Phosphoinositide phospholipase C (AHRD V3.3 *** O49952_SOLTU) AT3G08510 Solyc05g052770.1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 Tyrosine phosphatase family protein (AHRD V3.3 *-* A0A2U1PX48_ARTAN) Solyc05g052780.4 913 1719 2114 2140 2439 2468 2568 2292 1874 1781 1713 2128 1996 1782 1733 LIM domain-containing protein (AHRD V3.3 *-* A0A1Q3AMP1_CEPFO) AT3G55770 Solyc05g052790.3 268 343 454 377 256 317 353 254 257 274 357 224 381 311 347 Nucleotide-sugar transporter family protein (AHRD V3.3 *** A0A2U1PWK4_ARTAN) AT3G11320 Solyc05g052800.3 2684 3135 4680 3339 4284 4657 4203 3260 2688 2213 4171 2728 3495 3416 3853 60S ribosomal protein L35a-3 (AHRD V3.3 *** A0A2G3CHN6_CAPCH) AT1G74270 Solyc05g052810.4 566 1799 1608 1059 1738 1694 1728 1613 1107 648 1161 1133 1993 1828 1085 60S ribosomal protein L35a-3 (AHRD V3.3 *-* A0A2G3CHN6_CAPCH) AT1G74270 Solyc05g052820.3 73 80 68 178 115 105 97 71 120 103 124 144 96 93 93 proline transporter 3 AT2G39890 Solyc05g052830.3 43 137 121 146 119 158 138 102 158 131 208 174 120 132 130 Proline transporter 1 (AHRD V3.3 *** A0A1U8GQ37_CAPAN) AT2G39890 Solyc05g052840.1 477 915 486 894 816 753 794 950 616 550 580 765 683 870 485 Tubulin-folding cofactor C (AHRD V3.3 *** A0A2G3CHF8_CAPCH) AT4G39920 Solyc05g052850.3 388 244 210 237 187 190 220 162 205 159 174 245 215 266 267 R2R3MYB transcription factor 109 AT3G55730 Solyc05g052860.3 0 6 3 0 0 5 5 7 1 2 8 6 0 1 9 DUF620 domain-containing protein (AHRD V3.3 *** A0A1Q3AM34_CEPFO) AT5G05840 Solyc05g052870.4 0 0 0 0 2 0 0 1 2 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2U1NU39_ARTAN) Solyc05g052880.4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant/T7H20-70 protein (AHRD V3.3 *** A0A072U094_MEDTR) Solyc05g052890.3 10 14 9 38 4 3 5 4 37 19 36 9 5 2 45 Plant/protein (AHRD V3.3 *** Q84WZ5_ARATH) Solyc05g052900.3 4 0 4 0 0 0 0 0 0 0 5 0 0 0 9 Ras gtpase (AHRD V3.3 *** A0A1J9QT15_9PEZI) Solyc05g052910.4 296 435 591 794 271 299 320 211 227 210 253 156 658 526 950 Protein DA1-related 2 (AHRD V3.3 *** A0A2G2ZJK5_CAPAN) AT2G39830 Solyc05g052920.4 486 869 768 890 891 939 1070 879 675 617 629 550 621 827 827 Folylpolyglutamate synthase (AHRD V3.3 *** A0A2G3CHR0_CAPCH) AT5G05980 Solyc05g052930.3 294 407 308 301 506 378 359 529 394 510 248 394 462 364 384 Protein YIPF (AHRD V3.3 *** A0A2G2WTU7_CAPBA) AT2G39805 Solyc05g052940.3 172 173 234 256 239 181 240 206 175 218 191 245 226 234 217 CASP-like protein (AHRD V3.3 *** A0A1Q3BR28_CEPFO) AT5G02060 Solyc05g052950.4 316 243 11 192 296 281 332 323 138 66 7 74 80 12 7 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** Q9M2S1_ARATH) AT3G55580 Solyc05g052960.4 893 759 690 623 738 634 718 739 703 714 651 734 904 830 706 BTB/POZ and MATH domain-containing protein (AHRD V3.3 *** A0A2R6PM37_ACTCH) AT2G39760 Solyc05g052970.4 792 1343 1013 1298 1336 1121 1260 1695 1325 1237 1016 1202 1045 1211 1075 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PR33_ARTAN) AT2G39750 Solyc05g052980.4 7091 2172 1408 2146 1713 1240 1706 1345 1930 3677 2225 2578 2473 3026 8432 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1LBV4_ARTAN) AT3G11410 Solyc05g052990.4 351 638 599 762 845 807 863 867 525 715 728 794 561 508 497 Maternal effect embryo arrest protein (AHRD V3.3 *** Q94K16_ARATH) AT5G05950 Solyc05g053000.1 56 57 26 53 57 21 30 24 23 26 16 23 46 55 64 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2G2WTS2_CAPBA) AT3G55560 Solyc05g053010.1 134 231 376 165 279 258 214 207 219 223 304 206 261 188 264 Lectin receptor kinase (AHRD V3.3 *** B8XSM9_WHEAT) AT3G55550 Solyc05g053020.3 0 2 9 0 2 0 2 0 1 0 8 0 0 0 1 Thaumatin-like protein (AHRD V3.3 *** A0A1U8H124_CAPAN) Solyc05g053030.1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 Glycerol-3-phosphate acyltransferase 5 (AHRD V3.3 *** A0A2G2XA33_CAPBA) AT3G11430 Solyc05g053040.3 1290 698 739 797 665 505 553 464 684 924 906 555 668 634 1088 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1KMS0_ARTAN) AT3G55530 Solyc05g053050.1 2 2 1 3 1 0 2 0 1 5 0 0 5 2 0 Cyclin-dependent protein kinase inhibitor SMR4 (AHRD V3.3 *** SMR4_ARATH) AT5G02220 Solyc05g053060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g053080.2 7 4 7 8 0 8 4 3 6 11 27 12 1 0 1 Unknown protein Solyc05g053070.4 1510 1293 8135 2312 2023 2345 2208 2086 6321 6359 12044 2785 2976 2030 11680 Unknown protein Solyc05g053090.2 532 402 347 389 275 244 235 197 377 502 385 239 442 399 597 Transcription factor GRAS (AHRD V3.3 *** A0A200R547_9MAGN) Solyc05g053100.3 419 374 739 554 590 704 857 545 681 579 852 717 236 582 869 Dihydrolipoyl dehydrogenase-like protein (AHRD V3.3 *** A0A2K3PDU3_TRIPR) Solyc05g053110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Yellow stripe-like protein (AHRD V3.3 *** A0A2D1UXE7_ROSHC) Solyc05g053120.1 7 52 148 232 106 60 52 101 55 23 22 147 24 59 26 Glycosyltransferase (AHRD V3.3 *** A0A0A1WC49_NICAT) Solyc05g053130.3 1207 927 833 989 871 862 1107 899 874 1046 690 796 778 957 906 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** Q94C94_ARATH) AT1G04140 Solyc05g053133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g053137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g053140.3 1407 2062 1453 1566 1913 1973 1890 2285 1753 1781 1407 1861 2134 2195 1497 26S proteasome non-ATPase regulatory subunit 13 (AHRD V3.3 *** B6TA88_MAIZE) AT4G19006 Solyc05g053150.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 71 Solyc05g053155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G2X2A1_CAPBA) Solyc05g053160.3 44 12 25 0 9 0 1 0 3 1 6 2 0 3 26 AWPM-19-like family protein (AHRD V3.3 *** O23029_ARATH) AT1G04560 Solyc05g053170.3 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Chalcone synthase (AHRD V3.3 *** A0A2G2ZJX1_CAPAN) Solyc05g053180.3 146 95 173 294 88 66 73 39 84 347 429 35 107 80 540 SsrA-binding protein (AHRD V3.3 *** Q9LUN9_ARATH) AT3G17580 Solyc05g053190.3 187 287 334 282 359 355 419 246 255 178 292 221 370 322 368 tRNA pseudouridine synthase (AHRD V3.3 *** A0A2G2ZJP1_CAPAN) AT3G06950 Solyc05g053200.3 83 143 87 154 147 115 146 130 137 133 83 139 126 118 111 PB1 domain-containing protein (AHRD V3.3 *** A0A2U1N5Q9_ARTAN) AT1G49920 Solyc05g053210.4 2250 1889 992 1541 1185 1242 1281 1027 1629 2429 1339 1269 1754 1191 1482 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2WU69_CAPBA) AT3G17510 Solyc05g053220.3 1152 1706 1760 1206 1762 1912 1630 1578 1321 1122 1463 1223 1943 1668 1482 Fcf2 pre-rRNA processing (AHRD V3.3 *** A0A200QHC3_9MAGN) AT5G30495 Solyc05g053230.3 964 923 896 880 805 798 830 747 887 947 872 675 1230 848 757 Protein kinase superfamily protein (AHRD V3.3 *** Q9LUT0_ARATH) AT3G17410 Solyc05g053240.4 1871 1722 1380 1697 1661 1927 1878 1727 2332 2241 2153 1633 1283 1362 1659 Squamosa promoter binding protein12b AT3G60030 Solyc05g053250.4 315 312 275 261 266 278 252 246 227 255 372 237 431 302 390 DNL-type zinc finger (AHRD V3.3 *-* A0A2K3L0X2_TRIPR) AT3G54826 Solyc05g053260.3 402 358 212 299 311 325 328 398 495 430 225 405 278 318 199 DNA (Cytosine-5)-methyltransferase DRM2 (AHRD V3.3 *** A0A1J3FZB1_NOCCA) Solyc05g053270.1 40 33 48 71 66 66 72 43 46 43 62 69 32 33 70 DNA (Cytosine-5)-methyltransferase DRM2 (AHRD V3.3 *-* A0A2I0WKL2_9ASPA) Solyc05g053280.3 439 531 568 625 730 730 674 776 666 607 511 700 452 493 393 Galactosyltransferase family protein (AHRD V3.3 *** A0A2H1ZEH6_ARATH) AT3G06440 Solyc05g053290.3 323 339 372 330 280 317 266 254 285 252 496 272 322 334 407 Protein phosphatase-2C (AHRD V3.3 *** O82469_MESCR) Solyc05g053300.3 815 2200 1979 2604 2518 2716 2793 2329 1766 1640 1818 1648 1947 1872 1712 dihydrolipoamide dehydrogenase precursor AT1G48030 Solyc05g053310.3 212 597 755 793 1056 939 1045 826 719 466 843 777 471 559 674 Stress responsive A/B Barrel domain containing protein (AHRD V3.3 *** A0A1Y1IK97_KLENI) AT3G17210 Solyc05g053320.1 21 62 67 57 62 58 64 64 84 35 102 65 102 61 42 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1MW82_ARTAN),Pfam:PF14223 Solyc05g053330.3 139 175 161 112 213 210 208 129 227 133 221 91 205 128 45 Transcription factor (AHRD V3.3 *** A0A2G3CHW7_CAPCH) AT3G06490 Solyc05g053340.4 14 22 2 14 0 3 2 3 29 15 48 30 12 10 10 gibberellin 2-oxidase 1 Solyc05g053350.3 0 0 0 0 4 2 1 3 0 0 7 0 0 0 0 Desiccation-related protein PCC13-62 (AHRD V3.3 *** A0A2G3CHV3_CAPCH),Pfam:PF13668 AT1G47980 Solyc05g053360.3 518 419 597 660 419 442 518 434 628 496 781 617 436 534 618 transmembrane protein (AHRD V3.3 *-* AT3G17120.5) AT3G17120 Solyc05g053370.3 14 27 25 77 18 12 15 16 10 23 14 16 27 24 50 Zinc transporter 6 (AHRD V3.3 *** A0A2G2WTW3_CAPBA) AT2G30080 Solyc05g053380.4 14 22 10 3 2 1 4 3 15 10 2 13 10 9 1 WRKY transcription factor 48 AT5G49520 Solyc05g053390.4 714 1016 820 681 739 729 788 699 593 521 671 556 997 805 677 Prefoldin subunit 3 (AHRD V3.3 *** A0A2G3CHY3_CAPCH) AT5G49510 Solyc05g053400.3 417 1219 225 717 538 737 636 669 1419 1676 467 3107 760 665 296 Glycosyltransferase (AHRD V3.3 *** A0A0A1WC49_NICAT) Solyc05g053410.4 663 435 268 650 728 797 789 854 657 482 266 484 455 441 294 phytochrome B2 AT2G18790 Solyc05g053420.1 4 2 0 9 0 0 0 2 0 0 0 0 0 3 0 Transcription factor GRAS (AHRD V3.3 *** A0A200PWD6_9MAGN) Solyc05g053430.3 178 327 405 280 386 291 364 338 302 182 302 273 440 389 330 DNA-directed RNA polymerase subunit (AHRD V3.3 *** A0A2G2WTX1_CAPBA) AT3G16980 Solyc05g053440.4 1910 4438 6697 4558 3658 4706 4500 3520 2552 2840 4668 3371 5047 5071 4688 Unknown protein Solyc05g053450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 late embryogenesis abundant protein 1-like (AHRD V3.3 *** A0A2I4DKC7_9ROSI) AT4G13560 Solyc05g053460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *** A0A200R734_9MAGN) AT4G24974 Solyc05g053465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *-* A0A103Y0K7_CYNCS) AT4G24974 Solyc05g053470.3 2305 3918 2857 2183 2801 2884 2641 2909 2193 1686 1886 2384 5074 3996 2504 60 kDa chaperonin (AHRD V3.3 *** Q8H903_ORYSJ) AT3G23990 Solyc05g053490.4 233 324 296 402 380 375 387 392 307 305 280 263 339 314 320 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** Q9LIQ3_ARATH) AT3G24040 Solyc05g053500.4 397 293 545 363 187 177 182 148 398 312 654 330 336 252 379 GATA transcription factor (AHRD V3.3 *** G7K6G0_MEDTR) AT3G24050 Solyc05g053520.3 19 76 118 112 232 198 185 233 86 50 94 131 29 59 51 DNA polymerase delta subunit 4 (AHRD V3.3 *** A0A2G3C5T1_CAPCH) AT1G09815 Solyc05g053530.1 17 1 10 14 1 3 6 2 14 13 17 24 1 11 16 9-cis-epoxycarotenoid dioxygenase (AHRD V3.3 *** A0A1C9ZU82_9LILI) AT3G24220 Solyc05g053540.3 770 1049 849 1090 1059 1117 1180 1306 1167 1161 753 1078 995 1034 849 Dihydroxy-acid dehydratase (AHRD V3.3 *** A0A2G3CHU1_CAPCH) AT3G23940 Solyc05g053550.3 4991 7621 1460 4225 2100 1533 2324 1114 7535 6497 3519 7373 4746 4100 7100 chalcone synthase 2 AT5G13930 Solyc05g053555.1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 ribosome biogenesis NEP1-like protein (AHRD V3.3 *** AT1G63060.1) AT1G63060 Solyc05g053560.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cellulose synthase (AHRD V3.3 *** A0A200PSS6_9MAGN) AT2G33100 Solyc05g053570.4 107 128 121 82 96 108 122 90 102 74 75 117 98 141 115 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) AT1G15520 Solyc05g053580.1 3 5 9 0 13 5 9 6 7 1 14 6 2 1 0 Unknown protein Solyc05g053590.4 1530 1008 865 1036 928 1018 1073 1072 1035 1171 875 952 990 1228 1240 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) AT1G15520 Solyc05g053600.3 245 122 43 68 1 5 2 10 19 61 21 14 75 75 123 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) AT1G15520 Solyc05g053610.2 1 1 0 2 0 0 0 0 0 0 0 0 0 35 39 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) AT1G15520 Solyc05g053620.3 0 4 0 1 10 0 1 3 4 0 5 0 2 0 0 F-box protein PP2-B11-like (AHRD V3.3 *** Q3Y625_TOBAC) Solyc05g053630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g053640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g053650.3 3153 4062 3566 3588 3759 3931 3851 4250 4048 3606 3126 3666 4170 4213 3171 26S proteasome non-ATPase regulatory subunit 1 homolog (AHRD V3.3 *** A0A2G3CI27_CAPCH) AT2G32730 Solyc05g053660.3 11 5 9 1 1 12 6 2 23 20 32 3 3 8 11 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1LW68_ARTAN) AT3G24140 Solyc05g053670.3 2257 4725 5915 4031 5616 5725 5658 5011 3254 2484 3846 3718 5339 4780 5253 60S ribosomal protein L13a (AHRD V3.3 *** B6SJA0_MAIZE) AT5G48760 Solyc05g053680.1 0 0 17 5 0 0 0 0 0 0 3 1 0 1 0 Pectinesterase (AHRD V3.3 *** A0A2G2VIL1_CAPBA) Solyc05g053690.2 15 71 38 79 74 106 81 95 53 26 79 54 47 50 46 Ubiquitinyl hydrolase 1 (AHRD V3.3 *** A0A2G2ZTM8_CAPAN) AT1G04860 Solyc05g053700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A1Q3BRV6_CEPFO) AT4G13090 Solyc05g053710.4 1568 1074 1067 1113 1021 850 934 1024 1208 1324 985 1106 1205 1214 968 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1PS98_ARTAN) Solyc05g053720.4 340 515 650 492 438 603 629 538 495 457 613 442 527 544 726 O-fucosyltransferase (AHRD V3.3 *** A0A2P5A877_PARAD) AT1G04910 Solyc05g053730.3 296 688 592 439 659 584 580 654 558 355 579 508 899 726 733 stress response NST1-like protein (AHRD V3.3 *** AT5G49210.2) AT5G49210 Solyc05g053740.3 347 229 329 224 172 173 235 160 145 190 158 160 270 205 182 Alkaline ceramidase (AHRD V3.3 *** ACER_ARATH) AT4G22330 Solyc05g053750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lipase (AHRD V3.3 *** A0A2G2WUE0_CAPBA) Solyc05g053760.4 1243 495 323 475 268 320 284 240 336 430 308 274 381 390 601 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G3AV72_CAPCH) AT4G13830 Solyc05g053770.4 2626 1406 1817 1387 989 1555 1247 1006 1190 862 2061 927 1278 1309 2542 myb-like protein X (AHRD V3.3 *-* A0A2I4GJJ9_9ROSI) AT5G48610 Solyc05g053780.4 2525 2860 2254 1783 1410 1466 1445 1484 1238 1618 1605 1502 4257 3163 2479 RNA binding protein (AHRD V3.3 *** O23793_NICSY) AT4G13850 Solyc05g053790.1 15 16 22 23 28 22 20 24 20 25 31 25 2 15 7 UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** A0A1J3F7T2_NOCCA) Solyc05g053800.3 2148 1707 1429 1345 1435 1442 1347 1584 1663 1165 1254 1482 1548 1942 1487 DNA repair protein RAD50 (AHRD V3.3 *** A0A2G2ZJV2_CAPAN) AT2G31970 Solyc05g053810.3 1493 7689 6132 6871 11320 9712 10397 11949 8775 5931 5120 7701 6986 7553 5941 Serine hydroxymethyltransferase (AHRD V3.3 *** A0A2G3CI35_CAPCH) AT4G13930 Solyc05g053820.3 417 308 301 374 327 358 333 389 377 340 317 296 265 349 344 Glycosyltransferase (AHRD V3.3 *** A0A2Z4BSF1_9APIA) Solyc05g053830.3 3119 3099 2261 2473 2419 2449 2573 2569 2502 2891 1890 2461 2740 2896 2323 Protein transport protein SEC23 (AHRD V3.3 *** A0A2G2WUU4_CAPBA) AT3G23660 Solyc05g053835.2 6751 5318 4567 4429 4992 4803 4622 6108 6027 6899 4218 6106 5878 6133 5440 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1Q1B2_ARTAN) AT3G04240 Solyc05g053850.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Protein FLOWERING LOCUS T (AHRD V3.3 *** A0A2G3CJ17_CAPCH) Solyc05g053860.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Organic cation/carnitine transporter 3 (AHRD V3.3 *** A0A2G2WUV1_CAPBA) AT1G16390 Solyc05g053865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3L8G7_TRIPR) Solyc05g053870.3 429 331 464 373 305 265 289 293 373 403 383 263 363 401 328 E3 ubiquitin-protein ligase RGLG2 (AHRD V3.3 *** A0A1U8GQX3_CAPAN) AT1G79380 Solyc05g053880.4 256 352 258 194 279 241 261 237 172 146 184 245 471 419 407 U3 containing 90S pre-ribosomal complex subunit (AHRD V3.3 *-* AT2G43110.1) AT2G43110 Solyc05g053890.3 82 329 189 293 660 634 662 541 321 300 134 326 422 290 169 Glycosyltransferase (AHRD V3.3 *** A0A2I4EYF5_9ROSI) Solyc05g053900.4 224 147 159 118 158 177 191 186 150 172 93 234 131 148 81 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** F4IAD5_ARATH) AT1G05840 Solyc05g053910.1 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 Phospholipase A1 (AHRD V3.3 *** A4ZX88_BRACM) Solyc05g053920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phospholipase A1 (AHRD V3.3 *** A4ZX88_BRACM) Solyc05g053930.4 1601 1480 2157 1680 1476 1735 1717 1372 1488 1587 2162 1745 1583 1810 1615 Protein kinase APK1B, chloroplastic (AHRD V3.3 *** A0A1U8E7T5_CAPAN) AT5G02290 Solyc05g053940.3 601 922 737 703 1138 940 1018 1296 969 992 746 897 1108 758 691 Ras-related small GTP-binding protein (AHRD V3.3 *** A0A1Y0K2B8_9ROSI) Solyc05g053950.4 218 319 186 344 250 272 223 282 328 305 241 274 309 314 318 DUF1365 domain-containing protein (AHRD V3.3 *** A0A1Q3D604_CEPFO) AT1G30130 Solyc05g053960.3 11 87 68 88 126 111 102 92 118 123 196 152 129 66 57 Pistil extensin like protein, partial CDS only (AHRD V3.3 *-* Q7DLN2_TOBAC) Solyc05g053970.2 1 0 2 10 0 0 2 0 0 0 0 6 1 0 2 Amino acid transporter (AHRD V3.3 *** A0A200QES7_9MAGN) Solyc05g053980.1 125 42 93 91 33 44 52 30 58 63 191 28 85 61 235 Plant resistance protein (AHRD V3.3 *-* O81136_SOLLC) Solyc05g054010.4 120 133 173 87 58 57 59 60 108 99 128 76 139 180 173 Plant resistance protein (AHRD V3.3 *** O81136_SOLLC) Solyc05g054020.3 17 10 0 28 13 0 0 2 9 1 4 2 19 8 22 Plant resistance protein (AHRD V3.3 *-* O81136_SOLLC) Solyc05g054025.1 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 Amino acid transporter (AHRD V3.3 *** A0A200QES7_9MAGN) Solyc05g054030.3 27 75 46 55 72 67 50 51 23 31 16 47 37 32 9 Zinc finger protein (AHRD V3.3 *** A0A200QDS5_9MAGN) Solyc05g054040.4 26 305 197 303 463 492 457 533 353 212 220 406 193 316 187 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A1U8GL93_CAPAN) AT1G14670 Solyc05g054050.4 0 4 21 0 4 1 0 0 0 2 0 1 0 4 4 Glutamate decarboxylase (AHRD V3.3 *** B1Q3F1_SOLLC) AT5G17330 Solyc05g054060.3 2 83 47 48 80 94 87 131 64 27 52 65 42 58 24 UTP--glucose-1-phosphate uridylyltransferase (AHRD V3.3 *** A0A2G2ZK77_CAPAN) AT3G03250 Solyc05g054070.4 1243 3785 2364 1811 2835 2524 2555 3114 2332 1608 1823 2364 3697 3052 2084 60S ribosomal protein L6 (AHRD V3.3 *** A0A2G3CJ48_CAPCH) AT1G18540 Solyc05g054080.3 639 371 361 383 319 327 325 354 397 563 360 338 257 350 287 E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *** A0A1B1LUK2_VITPS) AT4G12570 Solyc05g054090.3 9 221 346 3103 2554 1620 1568 2391 268 150 101 145 97 59 1374 induced stolen tip protein TUB8-like (AHRD V3.3 *** XP_004239829.1) Solyc05g054100.3 1159 1447 1137 1116 1416 1316 1307 1180 1227 1027 1137 1033 1668 1308 1186 ER membrane protein complex subunit 3 (AHRD V3.3 *** A0A1U8F473_CAPAN) AT4G12590 Solyc05g054110.3 2 40 79 38 96 73 75 89 22 12 19 28 31 36 21 Rho GDP-dissociation inhibitor 1 (AHRD V3.3 *** A0A2G2WV63_CAPBA) AT3G07880 Solyc05g054120.1 488 439 463 395 338 361 355 393 463 442 431 423 328 290 287 Cysteine proteinase inhibitor (AHRD V3.3 *** A0A059TCM2_TOBAC) AT5G47550 Solyc05g054130.4 2595 1320 1235 1284 1246 1190 1187 1176 1410 1490 1394 1459 993 1093 1421 Mo25-like (AHRD V3.3 *** A0A200QFJ7_9MAGN) AT5G47540 Solyc05g054140.3 521 789 606 529 571 686 491 482 452 338 509 470 813 894 762 DNA-directed RNA polymerase (AHRD V3.3 *** Q8H1F8_ARATH) AT1G75670 Solyc05g054150.3 491 405 392 449 434 451 422 382 328 388 292 369 267 398 438 Ras-related protein RABA5a (AHRD V3.3 *** A0A1U8F693_CAPAN) AT5G47520 Solyc05g054160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g054170.4 646 417 480 373 257 210 242 297 430 628 555 313 528 427 328 Scarecrow-like protein 5 (AHRD V3.3 *** A0A2G3CJ54_CAPCH) Solyc05g054180.3 913 869 791 694 737 680 638 750 828 802 856 778 939 910 700 OBERON-like protein (AHRD V3.3 *** PVIP_NICBE) Solyc05g054190.4 454 415 690 547 527 625 545 549 542 461 547 597 343 399 479 CASP-like protein (AHRD V3.3 *** A0A328E4A6_9ASTE) AT2G35760 Solyc05g054200.4 468 453 482 437 389 402 428 392 546 399 450 459 324 517 412 Transcriptional adapter (AHRD V3.3 *** A0A2G2WV26_CAPBA) AT4G16420 Solyc05g054205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc05g054210.3 932 1037 1653 2655 354 492 389 337 949 770 2972 726 1301 943 3037 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* B3H4A8_ARATH) AT4G16380 Solyc05g054220.3 556 718 748 826 732 895 968 778 611 532 715 577 737 726 814 SNF1-related kinase complex anchoring protein AT4G16360 Solyc05g054230.4 74 57 56 93 31 59 26 54 36 50 51 58 32 76 57 Nudix hydrolase 2 (AHRD V3.3 *** A0A2G2ZK43_CAPAN) AT5G47650 Solyc05g054240.3 2057 2495 3422 4055 3010 2943 2572 2320 1867 1787 2452 2087 3358 3287 3616 Arginine methyltransferase (AHRD V3.3 *** A0A1Y1HZY4_KLENI) AT3G06930 Solyc05g054250.1 28 9 2 0 0 0 1 0 0 1 49 2 12 13 2 Heavy metal-associated isoprenylated plant protein 20 (AHRD V3.3 *** A0A1J6IF11_NICAT) Solyc05g054260.3 966 1700 1640 1856 2125 2304 2524 2028 1912 1434 1788 1535 1562 1790 2015 Kinesin-like protein (AHRD V3.3 *** A0A2G3CJ78_CAPCH) AT3G16630 Solyc05g054270.2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** O82240_ARATH) Solyc05g054280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g054290.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A0U9HU46_KLENI) Solyc05g054300.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaperone protein dnaJ 49 (AHRD V3.3 --* XP_020552991.1) Solyc05g054310.4 647 666 580 464 461 453 533 465 441 418 443 423 652 564 580 Elongation factor (AHRD V3.3 *** A0A200QRS9_9MAGN) AT1G04170 Solyc05g054315.1 713 2515 1339 2369 2711 2280 2318 2184 3585 3425 2974 3698 2583 2609 1906 Epoxide hydrolase (AHRD V3.3 *** Q41413_SOLTU) Solyc05g054340.4 451 304 244 318 240 303 322 291 296 449 404 284 352 367 473 Plant resistance protein (AHRD V3.3 *** O81136_SOLLC) Solyc05g054350.3 12042 3541 5495 5200 1231 1563 1208 1256 5121 9457 7121 6014 2110 3699 6503 Epoxide hydrolase (AHRD V3.3 *** Q41414_SOLTU) Solyc05g054360.4 17 38 66 113 130 121 132 79 42 34 69 51 31 33 36 Pectinesterase (AHRD V3.3 *** A0A2G2WV27_CAPBA) AT5G27870 Solyc05g054370.2 1774 1146 1038 936 966 1031 1011 1063 1145 1167 765 890 1245 1132 1240 Acyl-CoA dehydrogenase family member 10 (AHRD V3.3 *** A0A1J3CLI6_NOCCA) AT3G06810 Solyc05g054380.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 major allergen Pru ar 1-like (AHRD V3.3 *** A0A2I4DZK6_9ROSI) Solyc05g054390.4 1836 1710 1800 1446 2032 1927 1905 1708 2048 2011 2241 1325 1805 1322 1662 Two-component response regulator (AHRD V3.3 *** A0A2G2WV84_CAPBA) AT4G16110 Solyc05g054400.3 223 439 492 266 425 399 439 404 337 186 314 314 435 464 320 GATA transcription factor 23 (AHRD V3.3 *** A0A2G3CID0_CAPCH) AT3G16870 Solyc05g054405.1 249 444 537 445 457 500 466 437 345 203 518 419 455 446 392 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B4T0_ARATH) Solyc05g054410.4 2408 1864 1387 1742 2154 2156 2074 2387 2143 2488 1578 1788 1871 1519 1706 telomere binding protein 1 AT5G13820 Solyc05g054420.4 136 361 380 336 441 465 447 525 597 247 309 360 340 460 374 XH/XS domain protein (AHRD V3.3 *** A0A2K3NYB8_TRIPR) Solyc05g054430.4 68 244 213 188 252 286 308 296 210 132 174 262 165 269 170 DNA replication complex GINS protein PSF2 (AHRD V3.3 *** A0A1U8GTG0_CAPAN) AT3G12530 Solyc05g054440.4 0 19 58 0 0 0 8 4 0 0 0 0 2 0 0 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A2U1LWN7_ARTAN) AT3G55430 Solyc05g054450.1 280 702 657 837 1382 958 1161 1169 598 483 532 651 712 717 692 hypothetical protein (AHRD V3.3 *** AT3G55420.1) AT3G55420 Solyc05g054460.3 360 332 256 275 243 230 250 248 344 271 375 277 363 283 339 dolichyl-phosphate beta-glucosyltransferase-like (AHRD V3.3 *** A0A2I4DFB0_9ROSI) AT2G39630 Solyc05g054470.3 0 2 0 0 5 2 0 1 0 0 2 0 0 0 0 Unknown protein Solyc05g054480.3 75 1000 383 334 560 528 648 483 484 144 459 203 272 328 459 Actin (AHRD V3.3 *** A0A2G2VVS8_CAPBA) AT3G12110 Solyc05g054490.3 1425 2198 2192 2457 2026 2079 1870 2116 2269 2305 1985 2634 2146 2127 2264 3-oxo-5-alpha-steroid 4-dehydrogenase (AHRD V3.3 *** A0A200R6L0_9MAGN) AT3G55360 Solyc05g054500.1 1441 859 868 717 861 940 746 953 1104 893 1053 1003 840 891 987 DNA/RNA-binding protein Kin17 (AHRD V3.3 *** A0A200R6H7_9MAGN) AT1G55460 Solyc05g054510.2 28 89 53 67 48 73 65 52 64 20 87 40 17 19 26 Dof zinc finger protein (AHRD V3.3 *-* A0A2K3NE75_TRIPR) Solyc05g054520.4 461 482 459 448 406 366 421 420 397 398 395 380 441 405 417 Geranylgeranyl transferase type-1 subunit beta (AHRD V3.3 *** A0A1U8GTT6_CAPAN) AT2G39550 Solyc05g054530.1 1450 2315 4403 5317 5173 5706 4458 3715 2866 1938 4592 3349 2761 3355 3884 transmembrane protein (AHRD V3.3 *-* AT5G59350.1) AT2G39560 Solyc05g054540.4 468 532 365 535 624 588 574 700 456 465 301 496 486 387 351 Ubiquitin-conjugating enzyme E2 (AHRD V3.3 *-* A0A2P6VGJ4_9CHLO) Solyc05g054545.1 116 167 210 171 242 186 194 230 164 127 150 178 165 201 150 Ubiquitin conjugating enzyme (AHRD V3.3 *** A0A172MJZ4_PAESU) AT5G59300 Solyc05g054560.3 221 240 363 337 399 321 320 392 339 342 415 399 205 345 274 CASP-like protein (AHRD V3.3 *** A0A2G3CIG5_CAPCH) AT3G55390 Solyc05g054570.3 581 372 469 415 403 344 317 311 464 627 550 477 489 499 462 CRAL-TRIO lipid binding domain-containing protein (AHRD V3.3 *** A0A2U1PXE9_ARTAN) Solyc05g054580.3 27016 52570 33754 26696 39550 39556 38524 39536 23493 26517 21641 32061 57170 49006 29026 60S acidic ribosomal protein P0 (AHRD V3.3 *** A0A1U8FJI2_CAPAN) AT3G11250 Solyc05g054590.4 525 440 323 325 191 187 169 123 209 253 231 146 347 425 632 UDP-glucuronic acid decarboxylase (AHRD V3.3 *-* G5DXR5_SILLA) Solyc05g054600.3 188 284 269 266 271 265 271 226 274 208 205 300 276 304 257 Methionine--tRNA ligase (AHRD V3.3 *** A0A2G2WVB1_CAPBA) AT3G55400 Solyc05g054610.1 1 251 194 173 278 331 235 299 174 56 116 232 58 195 72 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc05g054620.4 381 303 271 279 331 279 322 318 280 198 282 253 317 299 346 ACT domain-containing protein (AHRD V3.3 *** A0A2U1PEX2_ARTAN) AT2G39570 Solyc05g054630.4 1595 1432 964 935 1028 980 948 1046 1155 1018 763 1002 1283 1397 940 Elongator complex protein 1 (AHRD V3.3 *** A0A2G3CIF0_CAPCH) AT5G13680 Solyc05g054640.4 2386 3747 2287 2361 2560 2528 2622 2930 2566 2144 2010 2086 3776 3760 2834 2-oxoglutarate dehydrogenase, E1 component (AHRD V3.3 *** Q9FLH2_ARATH) Solyc05g054650.1 0 6 0 0 0 0 0 0 0 0 1 3 10 0 2 Zinc finger protein (AHRD V3.3 *** A0A200PZ96_9MAGN) AT2G28710 Solyc05g054660.2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 Zinc finger protein (AHRD V3.3 *** A0A200PZ96_9MAGN) AT2G28710 Solyc05g054670.3 8 10 3 17 20 30 42 21 23 5 8 16 34 4 3 Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A2U1PXH7_ARTAN) AT3G55350 Solyc05g054680.1 248 256 278 238 276 308 294 209 312 193 307 196 250 274 201 Receptor-like protein kinase THESEUS 1 (AHRD V3.3 *** A0A2G2WVE3_CAPBA) Solyc05g054690.3 310 142 273 147 134 195 168 100 122 135 231 137 155 113 205 Unknown protein Solyc05g054700.3 1287 1469 1126 1750 1704 1683 1875 1733 1347 1571 1223 1663 1293 1339 1083 MAP kinase phosphatase AT3G55270 Solyc05g054710.3 848 766 721 752 858 734 750 816 1008 1013 1070 707 1062 891 709 Beta-hexosaminidase (AHRD V3.3 *** K4C2E8_SOLLC) AT3G55260 Solyc05g054720.3 1623 1602 1479 1504 1656 1749 1615 1976 1281 1365 1209 1468 1333 1477 1471 Protein TIC 20-I, chloroplastic (AHRD V3.3 *** A0A2G2X086_CAPBA) AT1G04940 Solyc05g054730.3 805 871 920 1019 875 909 958 762 585 552 624 603 921 745 1082 Metal tolerance protein 11 (AHRD V3.3 *** A0A2G2WUE3_CAPBA) AT2G39450 Solyc05g054740.3 409 677 549 943 631 673 743 707 586 431 474 578 613 454 546 Sulfate transporter (AHRD V3.3 *** Q93YK5_BRANA) AT3G12520 Solyc05g054750.3 148 51 16 310 87 48 48 26 74 24 42 43 39 59 58 Plant protein 1589 of Uncharacterized protein function (AHRD V3.3 *** A0A061FM19_THECC) Solyc05g054760.4 2579 4070 4812 5009 7253 6104 6003 6652 10154 5995 9818 9201 3072 3786 4679 dehydroascorbate reductase 1 AT1G19570 Solyc05g054770.3 190 139 137 151 75 74 109 83 102 69 232 68 135 162 218 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein (AHRD V3.3 *-* AT2G39435.6) Solyc05g054780.3 0 0 0 0 0 0 0 1 0 1 2 0 1 0 0 Dirigent protein (AHRD V3.3 *** K4C2F5_SOLLC) AT2G39430 Solyc05g054790.1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc05g054800.3 1406 1046 720 727 688 643 522 778 867 1045 875 949 1342 829 703 ALA-interacting subunit (AHRD V3.3 *** A0A1U8GR46_CAPAN) AT3G12740 Solyc05g054810.4 4450 7878 9342 6051 9143 9323 9659 8784 5108 5248 7328 6494 8527 7240 7768 Unknown protein Solyc05g054820.1 0 1 0 4 3 0 0 0 1 0 0 0 7 6 0 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1S6GXC2_TOBAC) Solyc05g054830.3 1961 1136 1442 976 558 569 556 708 1452 1778 1399 838 1534 1131 985 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2G3CIN6_CAPCH) AT3G12360 Solyc05g054840.3 87 104 97 139 83 123 86 79 98 81 58 116 123 123 100 cilia- and flagella-associated protein 298-B-like isoform X1 (AHRD V3.3 *** XP_010321365.1) Solyc05g054850.1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 membrane-associated kinase regulator (AHRD V3.3 *** AT2G39370.1) AT2G39370 Solyc05g054860.1 98 86 187 104 80 68 55 64 112 112 266 113 110 116 86 Receptor-like protein kinase HERK 1 (AHRD V3.3 *** A0A1U8GR51_CAPAN) Solyc05g054870.3 18 11 22 23 12 30 18 37 35 15 44 25 26 14 28 protein RDM16 isoform X1 (AHRD V3.3 *-* XP_010321364.1) Solyc05g054880.3 107 96 189 158 189 161 179 167 151 123 266 162 156 163 201 U4/U6 small nuclear ribonucleoprotein Prp3 (AHRD V3.3 *** A0A1J3FFH9_NOCCA) AT1G28060 Solyc05g054890.4 9 16 11 6 17 41 52 42 35 27 14 12 42 6 23 ABC transporter G family member (AHRD V3.3 *** A0A2K3PJ14_TRIPR) AT2G39350 Solyc05g054900.3 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 Blue copper protein (AHRD V3.3 *-* A0A2K3LCQ8_TRIPR) AT5G07475 Solyc05g054910.3 2157 1668 1507 1600 1423 1540 1692 1615 1603 1607 1383 1398 1530 1757 1773 SAC3/GANP/Nin1/mts3/eIF-3 p25 (AHRD V3.3 *** A0A200QHS5_9MAGN) AT2G39340 Solyc05g054920.4 7922 5993 5913 5675 6172 6766 6844 6028 4917 4680 5487 4625 5824 5802 6615 Serine/arginine-rich-splicing factor RS2Z32 (AHRD V3.3 *-* A0A0M8KRK6_NICAT) AT3G53500 Solyc05g054930.3 226 749 944 1464 1575 1613 1748 1212 538 551 836 850 387 750 1145 CAP-gly domain linker (AHRD V3.3 *** Q9M2W0_ARATH) AT3G55060 Solyc05g054940.3 335 447 608 588 683 711 782 495 588 506 604 576 501 507 682 Nitrilase-like protein 1 (AHRD V3.3 *** A0A2G3CIP7_CAPCH) AT4G08790 Solyc05g054950.2 457 465 447 492 505 595 562 476 422 374 461 348 453 516 475 Peroxisome biogenesis protein 12 (AHRD V3.3 *** A0A2G2XWY5_CAPAN) AT3G04460 Solyc05g054960.4 981 1180 910 1514 974 884 1008 1073 643 996 723 1117 1439 1429 879 Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial (AHRD V3.3 *** MORF5_ARATH) Solyc05g054970.3 2189 2505 2259 2239 2870 2990 2990 2876 2914 1909 2582 2558 2092 2502 2379 Ankyrin repeat (AHRD V3.3 *** A0A200PVW6_9MAGN) AT3G04470 Solyc05g054980.3 1030 1362 1224 1356 1586 1404 1563 1435 1282 1055 1228 1118 1222 1414 1061 Serine/threonine protein phosphatase 2A regulatory subunit B subunit alpha-like protein (AHRD V3.3 *** A0A2K3NUG4_TRIPR) AT5G28850 Solyc05g054990.3 393 626 536 433 634 562 619 589 484 365 599 456 806 686 481 Translation elongation factor EF1B/ribosomal protein S6 family protein (AHRD V3.3 *** Q9LSA1_ARATH) AT3G18760 Solyc05g055000.4 645 746 765 705 768 678 833 802 843 863 694 813 681 735 643 Cysteine desulfurase (AHRD V3.3 *** B2IZ65_NOSP7) AT1G08490 Solyc05g055010.4 754 382 457 431 424 387 472 287 305 303 361 345 317 299 407 RNA-binding protein 42 (AHRD V3.3 *** A0A2I4E3H6_9ROSI) Solyc05g055020.4 41 276 126 152 1139 960 952 866 241 63 258 216 75 148 86 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 (AHRD V3.3 *** A0A2G2WUJ9_CAPBA) AT5G28490 Solyc05g055030.2 0 1 1 1 0 1 0 0 3 0 0 0 0 5 0 R2R3MYB transcription factor 10 Solyc05g055040.3 292 369 167 270 297 291 270 338 269 309 194 332 268 250 344 Hexosyltransferase (AHRD V3.3 *** A0A2G2WUC9_CAPBA) AT5G18480 Solyc05g055050.3 0 0 2 1 1 2 2 8 0 0 0 7 0 0 0 Phosphoenolpyruvate carboxylase kinase (AHRD V3.3 *** Q9SDY0_SOLLC) Solyc05g055060.3 1743 1398 1237 1169 937 1169 1084 983 1290 1476 1208 997 1419 1261 1443 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A2G2WUB4_CAPBA) Solyc05g055070.4 446 376 544 490 322 447 416 378 366 370 470 310 248 405 559 Ethylene receptor (AHRD V3.3 *** A0A2G2WUD6_CAPBA) AT3G04580 Solyc05g055080.2 25 4 30 0 0 0 0 0 0 0 56 14 0 5 46 Unknown protein Solyc05g055090.4 2377 2665 2369 2356 2497 2422 2389 2492 2199 2031 1893 2203 2841 2779 2675 Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** A0A2G2XX24_CAPAN) Solyc05g055100.2 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 13 (AHRD V3.3 *** A0A2G2X297_CAPBA) Solyc05g055110.4 3067 2057 1079 1076 1228 1322 1434 1600 1420 1674 985 1598 1095 1518 1090 nuclear pore complex protein NUP1-like (AHRD V3.3 *-* A0A2I4DIV8_9ROSI) Solyc05g055130.1 845 497 401 451 343 397 424 303 271 351 345 335 359 460 388 26S proteasome non-ATPase regulatory subunit 1-like protein B (AHRD V3.3 *-* A0A2G2WUY2_CAPBA) Solyc05g055140.1 4 1 1 4 14 6 13 0 1 3 3 0 0 5 2 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1MY73_ARTAN) Solyc05g055150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CASP-like protein (AHRD V3.3 *-* A0A2G2XSI0_CAPBA) Solyc05g055160.3 81306 42472 37999 39795 20305 22281 19850 16674 30323 36279 36020 25239 36732 35223 57242 DnaJ protein (AHRD V3.3 *** Q43177_SOLTU) AT3G44110 Solyc05g055170.3 614 747 656 693 1022 691 825 785 786 484 773 629 877 943 691 charged multivesicular body protein 5-like (AHRD V3.3 *** A0A2I4G8C5_9ROSI) AT3G10640 Solyc05g055180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** Q9C574_ARATH) Solyc05g150152.1 10 14 12 13 0 2 7 1 5 4 32 1 2 7 24 Photosystem I reaction centre subunit N protein (AHRD V3.3 *** A0A2U1NHW7_ARTAN) AT1G49975 Solyc05g055190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 leucine-rich repeat receptor protein kinase EMS1-like (AHRD V3.3 *** A0A1U8GTK7_CAPAN) Solyc05g055200.4 45 118 56 79 164 83 75 92 89 77 176 43 70 103 119 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1KPR9_ARTAN) Solyc05g055210.3 806 869 702 815 772 818 753 819 868 746 707 768 785 862 935 Eukaryotic peptide chain release factor subunit 1 (AHRD V3.3 *** A0A1U8GR87_CAPAN) AT3G26618 Solyc05g055220.1 6 57 60 63 119 150 113 125 88 14 184 58 8 23 40 ovate family protein 10 AT5G04820 Solyc05g055230.2 2720 5359 5201 3477 4725 4279 4297 4858 3247 2989 3811 3622 5863 4672 4197 40S ribosomal protein S17 (AHRD V3.3 *** A0A2G2WU93_CAPBA) AT5G04800 Solyc05g055240.3 381 265 338 267 256 277 200 211 284 269 508 296 319 263 300 I-box binding factor AT5G04760 Solyc05g055250.2 152 353 548 653 972 874 924 643 605 411 770 604 327 538 540 beta-mannosyltransferase 4-like (AHRD V3.3 *** XP_023550939.1) AT5G04750 Solyc05g055260.4 609 896 1270 874 1184 1242 1115 907 676 538 984 863 1466 1267 1009 Small nuclear ribonucleoprotein G (AHRD V3.3 *** A0A2G3CIT2_CAPCH) AT3G11500 Solyc05g055270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 --* AT3G52710.1) Solyc05g055280.2 273 746 573 713 1102 1097 1087 1129 623 503 630 749 758 694 519 Ferredoxin (AHRD V3.3 *** M1C599_SOLTU) AT2G27510 Solyc05g055290.3 21 178 72 198 313 258 269 283 177 54 29 83 213 180 99 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MAY4_ARTAN) Solyc05g055300.1 494 645 562 614 865 713 684 886 615 653 608 744 645 608 335 Protein YIPF (AHRD V3.3 *** A0A1U8EX52_CAPAN) AT2G36300 Solyc05g055310.3 755 1154 1158 1155 1592 1247 1120 1692 1152 942 1274 738 1112 1075 1327 Heavy metal transport protein (AHRD V3.3 *-* A0A1S6YG40_PHAEQ) AT1G66240 Solyc05g055320.3 0 1 0 3 0 0 0 0 1 0 0 0 3 0 0 Peroxidase (AHRD V3.3 *** K4C2K8_SOLLC) Solyc05g055330.3 663 1003 853 962 362 434 428 382 736 437 499 701 482 978 1185 Pleiotropic drug resistance protein 2 (AHRD V3.3 *** A0A1U8GRL3_CAPAN) AT2G36380 Solyc05g055340.4 371 216 147 201 182 161 178 176 287 262 194 231 119 161 184 Plant tudor-like RNA-binding protein (AHRD V3.3 *** A0A072UR05_MEDTR) AT4G32440 Solyc05g055343.2 41 88 39 116 134 125 144 184 306 530 1224 1804 124 206 199 Glycosyltransferase (AHRD V3.3 *-* A0A2I4G8J4_9ROSI) Solyc05g055350.3 673 854 668 861 1021 850 818 1005 855 804 565 914 820 936 618 Ribonuclease Z, chloroplastic (AHRD V3.3 *** A0A1U8H054_CAPAN) AT2G04530 Solyc05g055360.4 4012 2311 2467 2791 2169 2186 2128 2080 1725 3015 3195 2538 2176 2224 3030 transcriptional regulator ATRX (AHRD V3.3 *** AT3G52240.1) AT3G52240 Solyc05g055370.1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 Protease Do-like 4, mitochondrial (AHRD V3.3 *-* A0A2G2VF44_CAPBA) Solyc05g055380.3 185 156 92 86 89 81 81 117 145 114 133 143 200 136 116 Unknown protein Solyc05g055390.3 469 296 350 335 258 264 228 212 205 280 330 239 304 306 508 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1N0W0_ARTAN) Solyc05g055400.4 595 984 1068 875 491 382 300 348 1391 727 1286 1002 1158 770 1158 Cytochrome P450 (AHRD V3.3 *** A0A200Q2G7_9MAGN) AT5G04660 Solyc05g055410.3 0 20 4 14 27 10 8 20 30 13 35 22 1 8 6 Glucomannan 4-beta-mannosyltransferase 9 (AHRD V3.3 *** A0A2G3B0Z3_CAPCH) Solyc05g055420.4 399 327 321 252 351 276 321 425 388 425 308 375 320 279 211 Glycosyltransferase family protein 64 protein C5 (AHRD V3.3 *** A0A1U8GRM7_CAPAN) AT5G04500 Solyc05g055425.1 12 4 30 27 23 34 39 8 17 16 15 24 20 14 52 Unknown protein Solyc05g055430.4 200 242 201 247 209 284 273 211 228 225 219 200 190 220 177 RAP release 2, galactose-binding-like domain protein, putative (DUF1997) (AHRD V3.3 *** A0A1P8BG49_ARATH) AT5G04440 Solyc05g055440.1 3521 12416 11784 12001 17106 14590 13793 18119 8983 10502 10694 17353 4938 9862 4584 Histone H2B (AHRD V3.3 *** A0A1U8HBK7_CAPAN) AT3G45980 Solyc05g055450.3 502 997 1008 963 1036 985 1043 1189 1034 802 801 966 1102 1022 726 Protein BTR1 (AHRD V3.3 *** A0A2G2XV39_CAPAN) AT5G04430 Solyc05g055460.1 29 13 6 27 0 0 0 0 23 33 9 4 12 10 4 Unknown protein Solyc05g055470.4 872 960 866 782 806 903 753 800 698 832 659 705 1188 947 734 NAC domain-containing protein 13 (AHRD V3.3 *** A0A2G2XV32_CAPAN) AT5G04410 Solyc05g055480.3 1520 1431 1054 1275 1125 1231 1262 1093 1069 1137 1067 1055 1452 1492 1200 NAC domain-containing protein (AHRD V3.3 *** A0A2U1NSV2_ARTAN) AT3G10480 Solyc05g055490.3 0 0 8 0 6 0 1 0 0 0 0 0 0 0 0 monocopper oxidase-like protein SKU5 (AHRD V3.3 *** A0A2I4GW02_9ROSI) Solyc05g055500.1 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 *** A0A200R5F9_9MAGN) AT3G10470 Solyc05g055510.3 110 104 164 206 176 113 135 95 72 88 75 33 63 133 142 Pectate lyase (AHRD V3.3 *** A0A2G2WUS5_CAPBA) AT5G04310 Solyc05g055520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g055530.4 41 101 56 47 111 84 125 138 82 78 51 56 72 68 62 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *-* A0A1U8GYG2_CAPAN) Solyc05g055535.1 1 1 3 6 3 8 5 6 3 3 0 2 2 15 0 Unknown protein Solyc05g055540.3 46 9 42 10 7 2 6 1 13 11 36 13 51 44 12 Major facilitator superfamily (AHRD V3.3 *** A0A2U1MQP6_ARTAN) AT2G39210 Solyc05g055550.3 429 234 191 221 215 205 228 197 254 251 346 203 187 291 264 vacuolar acid trehalase (AHRD V3.3 *** AT3G10405.1) AT3G10405 Solyc05g055560.1 57 18 0 8 3 1 5 0 4 7 6 0 25 13 44 Protein MEF2BNB-like protein (AHRD V3.3 *-* A0A1J3J2M0_NOCCA) Solyc05g055570.3 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 E3 ubiquitin-protein ligase RKP (AHRD V3.3 *-* A0A1U8EU57_CAPAN) Solyc05g055575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g055580.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc05g055590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 lysine-specific histone demethylase 1 homolog 1 (AHRD V3.3 *** A0A2I4HTG5_9ROSI) Solyc05g055600.4 861 905 810 692 851 922 805 955 1019 798 675 870 906 986 912 Vacuolar protein-sorting-associated protein 33-like protein (AHRD V3.3 *** A0A1J6K8K8_NICAT) AT3G54860 Solyc05g055610.4 1154 1207 941 1061 801 627 772 675 1055 868 740 1010 1103 1363 895 tRNA wybutosine-synthesizing protein 2/3/4 (AHRD V3.3 *** A0A2G2WUK7_CAPBA) AT4G04670 Solyc05g055620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g055630.3 189 211 206 218 228 221 245 170 191 143 246 177 234 181 166 S-acyltransferase (AHRD V3.3 *** A0A1U8GRR7_CAPAN) AT5G04270 Solyc05g055640.4 809 1734 2212 1555 2143 2082 2143 1692 1089 842 1308 1288 2363 2124 2091 60S ribosomal protein L38 (AHRD V3.3 *** A0A2G3B0P8_CAPCH) AT2G43460 Solyc05g055650.3 29 24 29 43 83 59 31 65 42 77 31 45 18 6 57 Quinoprotein alcohol dehydrogenase-like superfamily (AHRD V3.3 *** A0A2U1Q1H6_ARTAN) Solyc05g055660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flowering locus T (AHRD V3.3 *** J9WPJ0_TOBAC) Solyc05g055680.4 93 915 732 1377 2226 1938 1897 1829 597 529 795 1125 96 417 373 transmembrane protein (AHRD V3.3 *-* AT5G36800.1) Solyc05g055690.3 46 183 218 259 412 422 465 376 145 129 241 249 105 245 52 Sec24-like transport protein (AHRD V3.3 *** A0A2U1NGT5_ARTAN) AT3G44340 Solyc05g055700.3 232 456 397 358 682 779 818 646 802 478 474 788 599 548 339 Zinc-binding dehydrogenase (AHRD V3.3 *** A0A2U1MNF4_ARTAN) AT1G65560 Solyc05g055710.3 0 2 12 0 0 0 5 6 0 0 0 0 1 0 0 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A2G2Y5H1_CAPAN) Solyc05g055720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A2G3B0H4_CAPCH) Solyc05g055730.4 41 364 187 158 413 401 422 432 379 188 273 295 233 232 134 Methylenetetrahydrofolate reductase (AHRD V3.3 *** A0A2G3CIX4_CAPCH) AT2G44160 Solyc05g055740.4 19 14 12 32 4 8 10 1 16 10 3 7 15 6 72 Tyrosine phosphatase family protein (AHRD V3.3 *** A0A2U1PX48_ARTAN) AT3G02800 Solyc05g055750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WRKY transcription factor 34 Solyc05g055760.3 382 974 985 1019 1344 1251 1352 1352 917 610 825 943 981 1072 800 isopentenyl diphosphate isomerase AT5G16440 Solyc05g055770.3 3845 4886 4553 4583 5094 4724 5190 5400 5796 4592 4179 5199 5171 5326 4874 basic leucine zipper and W2 domain-containing protein 2-like (AHRD V3.3 *** A0A2I4DVN7_9ROSI) AT5G36230 Solyc05g055780.4 381 410 433 347 319 387 379 311 271 203 322 366 557 557 330 Protein RecA (AHRD V3.3 *** A0A2G2ZKM0_CAPAN) AT2G19490 Solyc05g055790.4 974 584 495 488 323 426 414 350 565 540 626 408 427 480 519 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1QE45_ARTAN) AT3G02750 Solyc05g055820.3 138 173 143 189 151 172 141 137 193 145 149 172 132 168 99 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *-* F4HQA8_ARATH),Pfam:PF13419 Solyc05g055830.3 408 346 378 313 319 344 351 294 367 275 510 413 426 444 539 R3H domain containing protein (AHRD V3.3 *** B4FB44_MAIZE) Solyc05g055840.4 59 170 73 107 90 87 71 90 76 60 97 71 87 69 118 Glycosyltransferase (AHRD V3.3 *** A0A1Q3DDP0_CEPFO) Solyc05g055850.3 493 893 714 912 1129 1179 1377 1112 746 730 677 713 647 608 778 Protein RESISTANCE TO PHYTOPHTHORA 1, chloroplastic (AHRD V3.3 *** RPH1_SOLTU) AT2G48070 Solyc05g055860.4 0 0 1 0 0 0 2 1 0 0 0 0 3 0 1 Serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3CIV2_CAPCH) AT3G02810 Solyc05g055870.3 457 220 512 256 222 188 173 175 182 204 324 208 250 256 230 F-box domain, Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1PQ05_ARTAN) AT2G02240 Solyc05g055880.4 405 516 590 474 465 512 358 452 314 242 413 303 760 629 517 Nucleolar protein 58 (AHRD V3.3 *** A0A1U8GRC5_CAPAN) AT3G05060 Solyc05g055890.3 312 400 305 301 371 324 347 280 243 256 214 285 439 361 293 DNA-directed RNA polymerase subunit (AHRD V3.3 *** A0A2G2ZKJ9_CAPAN) AT4G07950 Solyc05g055900.3 0 0 8 2 0 0 1 0 0 0 0 0 1 0 0 Heme oxygenase-like, multi-helical, HAD-like domain protein (AHRD V3.3 *** A0A2U1PNY5_ARTAN) Solyc05g055910.4 1077 615 412 417 276 246 305 338 464 752 685 387 628 630 706 Vacuolar protein sorting-associated protein (DUF946) (AHRD V3.3 *** Q9FND1_ARATH) AT3G04350 Solyc05g055920.4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* O22783_ARATH) Solyc05g055930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cysteine-rich repeat secretory protein 3-like (AHRD V3.3 *** A0A2I4DKT2_9ROSI) Solyc05g055940.3 1781 1905 1527 1957 2267 2115 2067 2071 1941 1654 1595 1327 2464 1875 2200 Protein PHR1-LIKE 1 (AHRD V3.3 *** A0A2G3CIW3_CAPCH) Solyc05g055950.1 3 3 0 3 0 0 0 1 3 2 1 2 3 2 3 Ankyrin repeat (AHRD V3.3 *-* A0A200Q4C7_9MAGN) Solyc05g055960.1 10 18 24 17 5 9 19 9 10 18 37 8 8 7 31 Ankyrin repeat (AHRD V3.3 *-* A0A200Q4C7_9MAGN) Solyc05g055970.4 2 12 5 11 2 6 5 10 8 10 15 10 7 9 4 Ankyrin repeat (AHRD V3.3 *-* A0A200Q4D4_9MAGN) Solyc05g055980.4 91 197 322 313 313 317 288 274 234 150 321 225 264 286 259 Protein phosphatase 2c-like protein (AHRD V3.3 *** Q8S2S5_EUTHA) Solyc05g055990.4 362 420 526 562 340 355 310 360 457 490 537 500 436 471 228 plasma membrane intrinsic protein 2.12 Solyc05g056000.3 856 1007 1108 1280 1232 1168 1103 1135 1589 1162 1497 965 1051 1117 1261 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q8VZV6_ARATH) AT5G19290 Solyc05g056010.3 610 557 538 531 540 591 590 607 605 607 621 584 537 563 520 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 *** A0A2I4E7L9_9ROSI) AT2G04865 Solyc05g056020.3 90 327 344 345 441 497 477 372 321 215 342 233 425 354 376 V-type proton ATPase subunit G (AHRD V3.3 *** A0A1U8GRL1_CAPAN) AT3G01390 Solyc05g056030.3 1078 886 1123 737 1222 1281 1110 1066 1145 1189 829 714 1005 1058 1352 Patatin (AHRD V3.3 *** A0A2G3CIZ2_CAPCH) AT2G39220 Solyc05g056040.3 1254 1017 1688 1115 790 1116 1113 709 1005 1068 1457 696 1510 1525 1352 Auxin Response Factor 24 Solyc05g056050.3 442 1571 897 1144 4064 3367 3453 3342 1489 1552 506 1316 792 559 651 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3CJ50_CAPCH) AT3G54890 Solyc05g056060.4 3913 5972 4824 5260 10095 8817 9233 9244 6955 7505 4019 6448 4680 3483 4692 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *-* A0A2G3CJ50_CAPCH) Solyc05g056080.4 17 27 58 27 39 27 21 19 27 26 41 26 17 26 10 zinc finger B-box protein (AHRD V3.3 *-* AT5G45410.5) Solyc05g056090.3 261 671 774 425 638 617 613 492 554 346 488 521 833 719 694 Transmembrane protein 70 mitochondrial-like (AHRD V3.3 *** A0A2K3P2B6_TRIPR) AT2G35790 Solyc05g056100.3 2532 2440 1944 1703 1767 1745 1758 1791 1780 1837 1586 1880 2280 2195 1938 Double-stranded RNA-binding protein 2 (AHRD V3.3 *** A0A1U8H0H3_CAPAN) Solyc05g056110.3 4513 1558 1400 1303 731 760 836 718 1088 1597 1245 1235 987 1240 1983 mRNA-decapping enzyme subunit 2 (AHRD V3.3 *** A0A1U8GRY6_CAPAN) AT5G13570 Solyc05g056120.3 518 1432 2038 1422 1396 1302 1200 1127 1976 2003 2457 1299 1832 1107 2285 GATA transcription factor (AHRD V3.3 *** K4C2T6_SOLLC) AT3G54810 Solyc05g056130.4 1672 2421 2305 1743 2190 1868 1885 2244 1986 2388 1864 2113 4625 3529 2344 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (AHRD V3.3 *-* K4C2T7_SOLLC) Solyc05g056140.4 971 1239 1117 1136 1416 1293 1141 1302 1329 989 1003 1265 919 973 977 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *** A0A2U1N0U6_ARTAN) AT2G38970 Solyc05g056150.4 171 252 254 175 246 285 253 301 149 187 215 176 233 247 189 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic (AHRD V3.3 *** A0A2G3CJ41_CAPCH) AT2G36230 Solyc05g056160.3 1040 1434 1719 1577 1702 1695 1541 2057 1755 1304 1387 1605 2036 1724 1151 Proteasome subunit beta (AHRD V3.3 *** A0A2G3CJ01_CAPCH) AT3G26340 Solyc05g056170.3 116 816 424 535 1236 1094 1093 1122 1250 1755 330 1144 642 603 212 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G2WVC6_CAPBA) Solyc05g056180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g056190.2 13 6 7 9 13 14 11 7 2 5 11 17 14 5 0 Unknown protein Solyc05g056200.1 97 57 96 89 43 50 51 57 143 99 102 71 97 87 105 Protein kinase domain (AHRD V3.3 *** A0A200QI14_9MAGN) Solyc05g056210.4 2917 2016 1624 1582 1276 1331 1337 1382 1912 1592 1892 1596 1835 2018 2032 N6-adenosine-methyltransferase subunit METTL14 (AHRD V3.3 *** A0A2G2WVH2_CAPBA) AT4G09980 Solyc05g056220.3 4098 3605 2778 3149 2645 2893 2500 2827 3367 3287 3318 3462 2770 3310 3391 N6-adenosine-methyltransferase subunit METTL14 (AHRD V3.3 *** A0A2G2ZKU5_CAPAN) AT4G09980 Solyc05g056230.4 2223 2651 2043 1736 2370 2146 2125 2472 2899 2603 2266 1968 3937 2699 2245 Calreticulin (AHRD V3.3 *** A0A2G3ASL1_CAPCH) AT1G08450 Solyc05g056240.3 3451 3671 5822 4955 6058 6032 5455 4196 3427 3739 5773 4047 3455 3129 4649 Acyl carrier protein (AHRD V3.3 *** A0A2G3CDT8_CAPCH) AT1G65290 Solyc05g056250.3 3424 3536 2641 2551 2315 2005 2181 2865 2359 2891 1776 2396 4025 3357 2185 Aspartate--tRNA ligase, cytoplasmic (AHRD V3.3 *** A0A2G3ASG7_CAPCH) AT4G31180 Solyc05g056260.2 665 690 425 622 672 549 559 635 664 563 425 525 717 673 513 Phenylalanine--tRNA ligase, mitochondrial (AHRD V3.3 *** A0A2G2V640_CAPBA) AT3G58140 Solyc05g056270.3 219 308 268 334 452 416 432 445 483 270 247 430 298 310 247 Phosphoenolpyruvate carboxylase family protein (AHRD V3.3 *** A0A2U1PPT0_ARTAN) AT2G43180 Solyc05g056280.2 771 1362 933 870 1276 1475 1014 1235 1145 885 867 1041 1498 1391 855 Luc7-related protein (AHRD V3.3 *** A0A2U1NKW5_ARTAN) AT5G17440 Solyc05g056290.4 1037 2757 1917 2945 2905 2284 2752 3163 1813 2037 1590 2237 2945 2445 1569 biotin carboxylase carrier AT5G16390 Solyc05g056300.4 1093 852 642 829 1535 1329 1472 1517 960 1117 526 890 678 501 574 Thioredoxin F-type, chloroplastic (AHRD V3.3 *** A0A2G2V655_CAPBA) AT3G02730 Solyc05g056310.3 5285 7638 5765 4843 5807 5318 5311 6883 5061 4503 4080 5441 8360 7139 5423 T-complex protein 1 subunit gamma (AHRD V3.3 *** A0A2G3ASI5_CAPCH) AT5G26360 Solyc05g056320.3 3490 2082 1598 2065 1466 1655 1631 1376 1658 2413 1899 1456 1686 1557 1848 Smr (Small MutS-related) domain protein (AHRD V3.3 *** A0A2K3NNB3_TRIPR) AT5G23520 Solyc05g150153.1 137 131 100 111 118 101 132 134 107 109 67 95 189 138 96 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CXR1_CEPFO) AT5G41980 Solyc05g056340.3 1872 2005 1835 1438 1509 1614 1454 1612 1988 1279 1633 1490 1900 2118 2126 Zinc finger CCCH domain protein (AHRD V3.3 *** Q8RWV9_ARATH) AT5G08450 Solyc05g056350.3 5053 3550 2804 2411 2009 2072 2270 2055 2627 2641 2336 2830 3100 3516 3123 cleft lip and palate transmembrane protein 1 homolog (AHRD V3.3 *** A0A2I4DPR5_9ROSI) AT5G08500 Solyc05g056360.2 22 68 44 60 74 87 51 83 38 45 15 63 29 68 11 Protein Mei2 (AHRD V3.3 *-* A0A0U9HRM8_KLENI) Solyc05g056370.4 751 415 887 1214 234 227 182 141 444 380 579 155 345 495 1685 Mitogen-activated protein kinase kinase kinase (AHRD V3.3 *** A0A2P5BIW6_PARAD) AT5G63710 Solyc05g056380.3 4 3 0 0 0 0 0 0 0 3 6 0 5 9 0 patatin-like phospholipase domain protein (AHRD V3.3 *** AT1G76980.2) Solyc05g056390.2 754 1727 1453 980 990 1100 1152 942 884 568 814 839 2567 2068 1303 10 kDa chaperonin (AHRD V3.3 *** A0A1U8F6X5_CAPAN) AT1G14980 Solyc05g056400.3 6 15 4 7 7 12 11 29 37 13 2 23 15 19 1 Protein disulfide-isomerase (AHRD V3.3 *** A0A2G3AZ54_CAPCH) AT1G77510 Solyc05g056410.1 25 17 24 22 22 25 36 22 17 5 21 11 23 14 13 Transcription factor (AHRD V3.3 *** A0A2U1MRD5_ARTAN) Solyc05g056420.4 13 102 78 105 90 133 167 124 68 58 54 77 39 91 21 Diacylglycerol kinase (AHRD V3.3 *** A0A2G2VD67_CAPBA) AT5G63770 Solyc05g056430.3 42 62 19 91 42 21 15 11 43 54 8 5 66 44 53 Small auxin up-regulated RNA56 Solyc05g056440.3 8 7 1 13 0 0 0 0 10 15 3 0 10 14 4 Small auxin up-regulated RNA57 Solyc05g056450.3 8 31 66 40 33 31 25 20 47 46 16 11 19 33 64 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A061DK44_THECC) AT2G03200 Solyc05g056460.4 1544 1433 2176 1419 1461 2152 1878 1260 1460 1097 2764 1439 1462 1491 2585 ABC transporter G family member 5 (AHRD V3.3 *-* A0A2G2VD23_CAPBA) AT5G13340 Solyc05g056470.1 119 477 167 504 936 1000 778 963 318 356 190 410 278 238 126 ABC transporter G family member 5 (AHRD V3.3 *** A0A2G2Y4B2_CAPAN) AT2G13610 Solyc05g056473.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc05g056477.1 0 1 0 1 0 0 0 0 1 0 0 0 0 6 65 NAC domain-containing protein (AHRD V3.3 *** A0A2K3LLY1_TRIPR) Solyc05g056480.3 88 128 72 99 128 166 138 145 124 62 109 111 75 148 328 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial (AHRD V3.3 *** A0A2G2Y480_CAPAN) AT5G09300 Solyc05g056490.4 362 701 609 703 860 835 973 929 722 582 582 679 730 831 586 3'(2'),5'-bisphosphate nucleotidase (AHRD V3.3 *** A0A2G2VD05_CAPBA) AT5G63980 Solyc05g056500.1 39 31 75 59 40 59 48 60 57 52 47 27 23 49 55 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VD56_CAPBA) Solyc05g056510.3 594 1162 953 799 1071 1019 1068 1050 964 624 875 826 1262 1157 857 ribosomal protein L20 (AHRD V3.3 *** AT5G62270.2) AT5G62270 Solyc05g056520.4 428 490 491 521 584 549 561 575 430 413 338 480 538 493 563 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MCW0_ARTAN) AT2G32170 Solyc05g056530.4 143 385 361 294 501 463 432 508 315 240 315 318 353 455 276 DDT domain-containing protein (AHRD V3.3 *** F4KB54_ARATH) AT5G08630 Solyc05g056540.4 930 696 668 657 999 896 894 1158 1044 1235 753 1105 734 685 494 Alcohol dehydrogenase-like protein (AHRD V3.3 *** Q8LDF7_ARATH) AT5G63620 Solyc05g056550.3 8 15 2 0 5 1 0 3 2 4 0 0 23 0 0 Protein kinase (AHRD V3.3 *** O65765_CRAPL) Solyc05g056560.3 460 508 518 387 587 511 484 529 429 503 347 396 551 518 327 Protein Hikeshi (AHRD V3.3 *** A0A1J3IID3_NOCCA) AT1G66080 Solyc05g056570.3 577 910 877 676 1033 1059 1038 1277 807 666 652 733 1200 966 667 Calcium-dependent protein kinase (AHRD V3.3 *** A0A2U1MRE6_ARTAN) Solyc05g056580.3 2159 4583 3723 3593 4360 4135 3908 4931 5141 3500 3544 3557 4387 3830 3949 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PWQ7_ARTAN) AT5G64030 Solyc05g056590.4 706 481 659 597 596 617 677 500 511 489 584 494 443 503 678 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *-* A0A2U1PZI9_ARTAN) Solyc06g004000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g004005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g005000.3 1079 964 713 654 675 576 524 673 536 784 527 706 832 790 748 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2I4EHJ4_9ROSI) AT5G60250 Solyc06g005010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit d, mitochondrial (AHRD V3.3 *-* A0A1U8ELT5_CAPAN) Solyc06g005020.3 0 0 8 3 9 4 4 3 4 4 0 0 3 1 0 ATP synthase subunit d, mitochondrial (AHRD V3.3 *** A0A1U8FCW0_CAPAN) Solyc06g005030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g005040.1 0 5 5 2 0 0 0 0 0 0 1 2 0 6 3 ABC transporter G family member 8 (AHRD V3.3 *-* A0A2G2ZZJ3_CAPAN) Solyc06g005060.3 26299 38108 24691 23154 31838 27561 27535 39850 29408 27597 19502 32409 35046 32548 23439 elongation factor 1-alpha AT1G07920 Solyc06g005070.3 204 270 208 186 227 265 250 232 108 347 179 221 508 430 377 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AQH5_ARATH) Solyc06g005080.4 2857 2023 1685 1609 1735 1767 1830 1796 1518 1856 1516 1473 1889 1837 1826 vacuolar protein sorting-associated protein 18 homolog (AHRD V3.3 *** A0A2I4DYA6_9ROSI) AT1G12470 Solyc06g005090.3 2 0 0 0 0 0 0 0 10 1 0 1 0 8 0 LOB domain-containing protein (AHRD V3.3 *** A0A2K3PP50_TRIPR) AT2G28500 Solyc06g005100.3 341 207 299 187 121 148 153 134 117 280 141 125 217 192 220 Phosphatidylinositol transfer protein (AHRD V3.3 *** A0A200QHH4_9MAGN) Solyc06g005110.3 378 237 349 198 154 202 227 182 186 232 294 200 203 240 382 40S ribosomal protein S23 (AHRD V3.3 *** A0A2I4EYK6_9ROSI) Solyc06g005120.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc06g005130.3 51 74 57 140 104 113 74 146 149 76 55 95 210 145 153 Dof zinc finger protein (AHRD V3.3 *** A0A2K3LIE4_TRIPR) AT2G28510 Solyc06g005140.3 1142 913 727 487 505 503 445 464 557 652 653 597 741 704 807 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3DBW2_CAPCH) AT4G02820 Solyc06g005150.3 3910 3510 2609 2347 3165 2557 2552 2955 2321 2375 1807 2826 3632 2731 1800 ascorbate peroxidase AT1G07890 Solyc06g005160.4 11073 16988 16122 16045 19878 18413 19401 21382 20138 18552 12392 22054 34242 20278 13312 cytosolic ascorbate peroxidase 1 AT1G07890 Solyc06g005170.3 2916 1547 5314 2079 568 827 724 640 997 2910 7788 1173 1776 1349 2435 mitogen-activated protein kinase 3 AT3G45640 Solyc06g005180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 *-* A0A2K3PA04_TRIPR) AT1G02040 Solyc06g005190.4 2096 1417 1441 1425 1149 1245 1308 1241 1396 1396 1355 1184 1093 1422 1699 RNA binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** Q9M1E4_ARATH) AT3G45630 Solyc06g005200.3 378 347 271 260 258 236 270 248 287 207 176 224 373 338 225 Ribonuclease P protein subunit p30 (AHRD V3.3 *-* A0A1J3CKF4_NOCCA) Solyc06g005220.2 65 66 64 68 58 82 110 57 63 41 50 84 69 89 70 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q4B4_9MAGN) AT1G12700 Solyc06g005230.3 310 302 292 353 350 392 359 344 405 277 428 305 327 227 276 Receptor-like protein kinase THESEUS 1 (AHRD V3.3 *** A0A2G2WHH2_CAPBA) Solyc06g005240.4 0 3 8 0 0 2 0 1 0 1 5 0 9 1 0 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2G2WHI7_CAPBA) Solyc06g005250.3 476 259 233 273 376 544 382 369 294 746 434 413 288 272 269 transmembrane protein (AHRD V3.3 *** AT1G10660.4) Solyc06g005260.3 451 730 819 637 681 809 668 647 801 952 730 586 1693 769 790 Glutaredoxin (AHRD V3.3 *** A0A2G2XHT5_CAPBA) AT5G40370 Solyc06g005270.3 5 8 8 29 11 7 7 7 27 8 14 25 18 22 2 DUF3755 domain-containing protein (AHRD V3.3 *** A0A1Q3BKP1_CEPFO) Solyc06g005280.1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1S6GXB7_TOBAC) Solyc06g005290.3 1014 557 493 481 440 545 428 460 417 643 606 499 773 557 664 UDP-galactose/UDP-glucose transporter 5B (AHRD V3.3 *** A0A1U8GXB7_CAPAN) AT5G59740 Solyc06g005300.4 48 20 12 52 7 11 6 7 20 41 47 8 54 12 98 UPA23 (AHRD V3.3 *** C8YZB5_CAPAN) AT2G28690 Solyc06g005310.3 63 34 60 221 0 0 0 0 0 1 27 0 54 33 88 Transcription factor MYB48 (AHRD V3.3 *** A0A2G2Z7N5_CAPAN) AT3G46130 Solyc06g005320.1 12 7 0 36 0 0 0 0 0 0 1 0 12 4 0 Transcription factor MYB48 (AHRD V3.3 *-* A0A2G3C4Q1_CAPCH) Solyc06g005330.3 51 17 28 60 16 1 4 0 1 3 4 10 30 8 19 R2R3MYB transcription factor 59 AT3G46130 Solyc06g005340.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RAB GTPase homolog 8 (AHRD V3.3 *-* AT3G53610.3) Solyc06g005350.3 10 6 30 20 50 41 41 35 27 10 27 37 15 21 40 Rab family GTPase (AHRD V3.3 *** A0A1Y1I3W2_KLENI) Solyc06g005360.3 2327 2263 2950 2533 2517 2815 2745 2528 2440 2730 2654 2484 3406 2697 2624 Actin-depolymerizing factor (AHRD V3.3 *** D9I9X9_HEVBR) Solyc06g005370.3 430 504 427 619 557 464 490 547 581 451 428 478 458 612 570 Cofactor-independent phosphoglycerate mutase (AHRD V3.3 *** A0A2K3PS83_TRIPR) AT3G30841 Solyc06g005380.3 201 221 172 173 220 192 191 189 228 179 119 172 244 252 167 F-box protein (AHRD V3.3 *** A0A1U8H630_CAPAN) AT3G58530 Solyc06g005385.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g005390.1 20 145 117 116 149 128 169 138 106 66 129 144 61 156 72 Histone H2B (AHRD V3.3 *** A0A1U8GXA4_CAPAN) Solyc06g005395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-1%2C3-N-Acetylglucosaminyltransferase family protein (AHRD V3.3 -** AT4G32105.1) Solyc06g005410.3 136 83 138 145 104 116 116 71 96 152 149 120 91 105 132 Unknown protein Solyc06g005420.1 315 1288 1332 1264 1628 1901 1561 1813 1055 869 1508 1562 538 1084 698 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc06g005430.1 106 665 656 769 1023 1194 776 991 464 448 660 1037 224 629 358 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc06g005440.1 0 5 11 3 0 4 0 0 8 1 0 1 3 0 1 70 kDa heat shock protein (AHRD V3.3 *-* Q10NA9_ORYSJ) Solyc06g005450.1 349 368 527 405 381 447 412 333 311 450 491 396 308 381 427 Unknown protein Solyc06g005460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pectinesterase inhibitor-like (AHRD V3.3 *** A0A1U8H1H8_CAPAN) Solyc06g005465.1 0 2 2 4 0 2 0 0 1 2 0 1 1 2 7 Metallothionein-like protein type 2 (AHRD V3.3 *** MT2Z_SOLLC) Solyc06g005480.3 287 99 182 158 51 69 74 67 83 118 154 70 112 197 184 DUF506 domain-containing protein (AHRD V3.3 *** A0A1Q3BLT1_CEPFO) AT2G39650 Solyc06g005490.3 565 406 577 478 505 479 506 521 664 659 665 648 419 458 473 Triosephosphate isomerase (AHRD V3.3 *** A0A200R1E9_9MAGN) AT3G55440 Solyc06g005500.4 2575 1422 1951 1678 761 860 743 796 1353 2176 2967 1299 1488 1297 1268 tomato protein kinase 1b AT1G07570 Solyc06g005520.4 335 258 454 302 456 423 431 431 369 357 336 430 230 364 176 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1M6Q6_ARTAN) AT2G28940 Solyc06g005525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc06g005530.2 17 54 85 53 68 84 63 55 20 31 21 59 16 47 51 Flowering-promoting factor 1 (AHRD V3.3 *** A0A1J3E4L1_NOCCA) Solyc06g005550.3 4 1 4 3 7 2 7 2 5 1 0 2 2 0 0 XH/XS domain protein (AHRD V3.3 *** A0A2K3NHW6_TRIPR) Solyc06g005560.4 235 2637 1359 1185 5768 5587 5363 6812 1158 575 2037 2073 649 1541 887 expansin9 AT2G28950 Solyc06g005570.4 1949 1318 1500 1353 1334 1454 1264 1360 1254 1357 1598 1388 1599 1366 1603 DCD (Development and Cell Death) domain protein (AHRD V3.3 *-* F4IUS3_ARATH) Solyc06g005580.4 0 0 0 0 17 4 8 1 0 0 0 0 0 0 0 Rhomboid-like protein (AHRD V3.3 *** A0A2G2WHZ7_CAPBA) Solyc06g005590.4 613 332 267 478 376 365 385 340 377 420 397 340 329 368 515 Telomere repeat-binding protein 4 (AHRD V3.3 *-* A0A2G3C540_CAPCH) AT1G07540 Solyc06g005600.3 1360 669 735 471 311 400 349 357 448 493 491 458 560 646 725 scarecrow-like transcription factor 11 (SCL11) (AHRD V3.3 *** AT5G59460.1) AT5G59460 Solyc06g005610.1 24 303 172 148 448 469 552 437 250 103 239 171 53 71 36 ROTUNDIFOLIA like 2 (AHRD V3.3 --* AT2G29125.1) AT1G07490 Solyc06g005620.3 2 1 0 0 0 0 0 0 0 0 1 0 0 5 7 Zinc transporter 2 (AHRD V3.3 *** A0A2G2WHM1_CAPBA) AT5G59520 Solyc06g005630.3 57 34 54 94 63 91 86 48 39 41 85 59 60 87 64 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1KMS0_ARTAN) Solyc06g005635.1 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 Copia-type polyprotein (AHRD V3.3 --* A0A2K3PK24_TRIPR) Solyc06g005650.2 2849 2290 2836 1269 1354 1236 1120 1214 1322 1234 4259 2138 2175 1497 2670 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A1U8GX66_CAPAN) Solyc06g005660.3 1 5 0 0 0 0 0 0 0 2 0 1 3 0 0 TRIO/F-actin-binding protein (AHRD V3.3 *-* AT2G37070.2) AT3G53320 Solyc06g005670.4 2853 2559 2469 2314 1955 2301 2210 2186 2149 2203 2519 2092 2417 2719 2769 Pumilio-like protein 1 (AHRD V3.3 *** A0A2G2Z7W6_CAPAN) Solyc06g005680.4 64 11 211 181 6 7 9 5 290 29 201 154 69 217 245 Two-component response regulator (AHRD V3.3 *-* C0HE02_MAIZE) AT3G46640 Solyc06g005690.3 10 13 7 15 14 21 11 18 14 3 9 7 17 27 19 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WHX5_CAPBA) AT5G59600 Solyc06g005700.1 26 29 24 36 38 38 50 40 22 27 64 23 87 64 24 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1N723_ARTAN) Solyc06g005710.3 131 342 300 328 707 633 652 638 475 342 456 394 176 210 457 Protein TIC 62, chloroplastic (AHRD V3.3 *** A0A1J3HBE9_NOCCA) AT3G46780 Solyc06g005720.4 72 90 69 69 59 81 104 58 95 58 96 99 70 84 34 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IKL5_ARATH),Pfam:PF13561 AT2G29260 Solyc06g005730.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pumilio like 2 (AHRD V3.3 *-* A0A2I0WU47_9ASPA) Solyc06g005740.3 0 0 0 0 0 0 0 1 1 0 2 0 2 0 0 pumilio homolog 1-like (AHRD V3.3 *-* A0A2I4DR62_9ROSI) Solyc06g005750.3 427 4600 1655 3103 2369 2692 2409 2586 7251 7304 5949 9471 4212 4372 3293 Methylsterol monooxygenase 2-1 (AHRD V3.3 *** A0A1U8H5Y5_CAPAN) Solyc06g005760.1 1 0 1 4 0 3 0 1 3 5 0 2 0 3 0 Unknown protein Solyc06g005770.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** K4C359_SOLLC) AT3G08770 Solyc06g005780.1 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A0V0GS93_SOLCH) AT3G08770 Solyc06g005795.2 5 4 22 7 2 7 10 2 3 1 6 2 1 25 7 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A1J6JAM7_NICAT) AT3G08770 Solyc06g005790.3 689 655 895 840 1094 883 917 947 755 936 826 890 1006 955 680 DNA-directed RNA polymerase II subunit RPB7 (AHRD V3.3 *** A0A1U8H425_CAPAN) AT5G59180 Solyc06g005800.3 658 867 707 798 954 906 965 889 702 784 745 779 841 759 713 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A2G2Z893_CAPAN) AT5G59160 Solyc06g005810.3 96 219 230 169 204 192 158 191 166 130 201 113 225 179 140 Ras gtpase (AHRD V3.3 *** A0A1J9QT15_9PEZI) AT3G46830 Solyc06g005820.3 0 0 0 0 0 0 0 0 0 0 3 1 1 1 14 Copper transporter 6 (AHRD V3.3 *** A0A2G2Z865_CAPAN) AT5G59030 Solyc06g005825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Copper transporter 6 (AHRD V3.3 *** A0A1U8H7Z5_CAPAN) Solyc06g005840.4 90 84 81 70 65 69 58 59 45 51 50 33 97 105 59 Mitochondrial import inner membrane translocase subunit TIM10 (AHRD V3.3 *** A0A2G2WHZ5_CAPBA) AT2G29530 Solyc06g005850.3 492 287 588 617 557 525 512 341 413 445 603 430 450 356 691 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** B6SN54_MAIZE) AT5G59000 Solyc06g005860.3 308 406 304 253 254 271 283 253 246 163 190 262 371 353 346 3'-5'-exoribonuclease family protein (AHRD V3.3 *** A0A2U1M7X8_ARTAN) AT4G27490 Solyc06g005870.1 1 0 2 1 7 0 0 0 0 0 2 1 0 0 0 Unknown protein Solyc06g005880.4 12 19 47 29 9 27 9 11 11 19 9 10 31 11 21 Receptor-like protein kinase (AHRD V3.3 *-* A0A2R6Q6W2_ACTCH) Solyc06g005890.3 1420 1351 961 1023 1356 1110 1016 1153 1425 1546 1075 980 2051 1258 1653 DUF674 family protein (AHRD V3.3 *** A0A2K3PIU4_TRIPR) Solyc06g005910.4 178 340 242 394 850 866 657 933 305 324 413 563 80 207 234 Tubulin beta chain (AHRD V3.3 *** A0A1U8GXJ7_CAPAN) Solyc06g005920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PAR1-like protein (AHRD V3.3 *** A0A2U1KIG3_ARTAN) Solyc06g005930.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein SENSITIVITY TO RED LIGHT REDUCED 1 (AHRD V3.3 *-* A0A1J3HM31_NOCCA) Solyc06g005940.3 1916 5285 3957 4378 5260 5069 5320 5990 11706 5030 5454 9146 9869 8441 5364 Protein disulfide-isomerase (AHRD V3.3 *** A0A1U8GX36_CAPAN) Solyc06g005950.3 1209 887 923 973 881 1001 921 981 1058 1010 1144 969 877 1134 893 ATP-dependent zinc metalloprotease FTSH 7, chloroplastic (AHRD V3.3 *** A0A2G2Z858_CAPAN) AT5G58870 Solyc06g005960.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dentin sialophosphoprotein (AHRD V3.3 *-* F4HQL7_ARATH) Solyc06g005965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g005970.2 450 634 536 675 675 602 502 692 908 603 604 988 941 921 741 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A2U1PL05_ARTAN) AT3G47000 Solyc06g005980.4 94 185 256 189 382 360 308 309 246 108 180 303 73 192 99 Anthranilate synthase (AHRD V3.3 *** A0A2U1KR52_ARTAN) Solyc06g005990.4 728 721 744 764 822 866 914 984 796 646 693 722 592 748 573 ATP-dependent RNA helicase SKI2 (AHRD V3.3 *** A0A2G3C566_CAPCH) AT3G46960 Solyc06g006000.3 492 83 1578 1476 20 12 16 22 3526 293 2005 1529 800 2485 1576 Maternal effect embryo arrest 59 (AHRD V3.3 *** B6T4K8_MAIZE) Solyc06g006010.3 23 10 2 15 10 7 10 19 9 16 5 0 37 15 13 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc06g006013.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) Solyc06g006015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) ATMG00240 Solyc06g006017.1 81 54 46 27 8 0 0 1 15 52 5 17 69 77 50 Lrr receptor-like serinethreonine-protein kinase fls2 (AHRD V3.3 *-* A0A314KWI8_NICAT) Solyc06g006020.3 195 90 56 59 2 1 0 8 33 115 10 10 200 48 39 Leucine-rich repeat protein kinase family protein, putative (AHRD V3.3 *-* A0A061F8C6_THECC) Solyc06g006022.1 59 30 46 19 4 5 1 1 11 14 12 3 52 31 6 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc06g006024.1 10 4 3 2 0 0 0 0 2 5 0 0 7 4 7 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc06g006026.1 11 2 1 0 0 0 0 0 2 1 0 0 2 2 0 Leucine-rich repeat protein kinase family protein, putative (AHRD V3.3 *-* A0A061F8C6_THECC) Solyc06g006028.1 48 43 50 27 7 2 0 2 14 62 0 11 103 48 8 Leucine-rich repeat protein kinase family protein, putative (AHRD V3.3 *-* A0A061F8T0_THECC) Solyc06g006080.3 4514 2406 5938 7681 782 704 742 878 6760 2725 5434 3269 6276 6889 15662 Phosphomethylpyrimidine synthase (AHRD V3.3 *** A0A2G3C580_CAPCH) AT2G29630 Solyc06g006090.1 60 30 29 82 2 7 1 7 31 43 15 6 37 32 66 josephin protein-like protein (AHRD V3.3 *-* AT1G07300.2) AT1G07300 Solyc06g006100.3 515 1112 1198 1505 1370 1520 1548 1336 1172 764 938 1141 1263 1431 1268 Anthranilate synthase (AHRD V3.3 *** A0A2U1KR52_ARTAN) AT2G29690 Solyc06g006110.3 249 151 480 820 6 5 3 6 108 140 112 46 99 139 128 Vacuolar cation/proton exchanger (AHRD V3.3 *** K4C393_SOLLC) AT3G51860 Solyc06g007110.3 1175 1022 865 834 1273 1357 1277 1354 1185 994 673 885 897 806 556 SMR domain-containing protein At5g58720-like (AHRD V3.3 *** A0A2I4DSB8_9ROSI) AT5G58720 Solyc06g007120.3 1145 1472 1141 800 1084 1104 1079 1318 1500 1720 1568 1630 1502 1187 806 PI-phospholipase C4 AT5G58700 Solyc06g007130.5.1 173 949 1112 1160 1526 1445 1326 1125 611 666 875 1048 711 868 690 omega-3 fatty acid desaturase -3 AT2G29980 Solyc06g007140.4 58 303 195 244 217 292 289 261 212 220 133 269 139 186 110 Omega-3 fatty acid desaturase (AHRD V3.3 *** A9LNM9_SOLLC) AT2G29980 Solyc06g007150.4 350 288 308 305 213 223 300 240 258 208 235 182 327 298 270 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** Q94C58_ARATH) AT5G58370 Solyc06g007160.4 21 94 84 75 121 108 146 85 84 25 105 30 60 52 172 Alternative NAD(P)H dehydrogenase mitochondrial-like (AHRD V3.3 *** A0A2K3P845_TRIPR) AT2G29990 Solyc06g007170.4 112 367 278 407 800 597 572 649 287 283 296 243 182 163 166 Protein trichome birefringence-like 45 (AHRD V3.3 *** A0A2G3C507_CAPCH) AT5G58600 Solyc06g007180.3 21194 3374 7985 3394 186 187 117 120 1067 11643 2502 1763 242 2132 1368 asparagine synthetase 1 AT3G47340 Solyc06g007190.4 458 288 569 102 53 41 32 48 28 112 1847 251 114 120 703 Protein phosphatase 2C (AHRD V3.3 *** O24078_MEDSA) AT2G30020 Solyc06g007200.4 1241 1869 1519 1379 1722 1978 1760 1997 1512 1164 1339 1562 1913 1826 1641 Methionine aminopeptidase 2A (AHRD V3.3 *** A0A2I0WVF2_9ASPA) AT3G51800 Solyc06g007210.3 1433 2642 3334 2954 3747 3609 3799 2760 1387 1119 2549 2102 3077 2703 2927 Unknown protein Solyc06g007220.4 557 1602 1634 1516 1685 1956 2190 1436 751 525 1374 1087 2037 1600 1509 Unknown protein Solyc06g007230.2 1 2 7 4 17 13 10 13 5 3 8 11 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LDD8_ARTAN) AT5G58580 Solyc06g007240.4 213 141 206 261 117 97 116 76 225 191 416 260 209 211 525 BAG family molecular chaperone regulator 2-like (AHRD V3.3 *** A0A2I4GUW4_9ROSI) Solyc06g007250.4 453 500 538 479 553 505 573 555 514 425 370 466 583 477 557 Plant intracellular Ras-group-related LRR protein 8 (AHRD V3.3 *** A0A199VAW6_ANACO) AT2G30105 Solyc06g007260.1 22 21 21 21 20 31 27 24 26 28 30 20 44 19 28 PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2 domain-containing protein (AHRD V3.3 *-* A0A1Q3B516_CEPFO) Solyc06g007270.1 32 13 27 22 39 24 20 24 12 27 21 16 11 25 10 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 --* AT1G55630.1) Solyc06g007275.1 55 52 47 74 49 68 70 87 63 77 45 64 49 51 75 Unknown protein Solyc06g007300.2 39 31 15 41 39 55 20 47 50 25 5 18 33 30 24 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1LV08_ARTAN) AT1G12700 Solyc06g007310.4 268 303 363 450 449 453 505 490 458 330 440 361 314 302 419 TatD family (AHRD V3.3 *** A0A200R335_9MAGN) AT3G52390 Solyc06g007320.3 3012 2667 2066 2118 1677 1884 1778 1878 2363 2493 1759 1794 4088 2761 2709 Ubiquitin activating enzyme E1 (AHRD V3.3 *** G1FER0_CAMSI) AT2G30110 Solyc06g007330.3 231 158 164 177 146 145 152 184 247 193 221 187 218 222 237 gamma-interferon-inducible lysosomal thiol reductase-like (AHRD V3.3 *** A0A2I4FAE5_9ROSI) AT1G07080 Solyc06g007340.3 1853 1785 1561 1686 1758 1570 1640 1581 1763 1856 1715 1744 2302 1478 1534 gamma-interferon-inducible lysosomal thiol reductase-like (AHRD V3.3 *** A0A2I4FAE5_9ROSI) AT1G07080 Solyc06g007350.4 178 233 376 246 378 326 452 370 421 289 325 378 211 271 306 Protein phosphatase 2C (AHRD V3.3 *** B6T3C7_MAIZE) AT2G30170 Solyc06g150100.1 2 3 4 2 3 6 3 3 1 4 3 3 2 8 7 Unknown protein Solyc06g007360.3 2400 2840 2400 1903 2220 2293 2237 2024 1589 1452 1398 1964 2432 2239 2159 40S ribosomal protein S4 (AHRD V3.3 *** A0A2G2Z7Q0_CAPAN) AT5G58420 Solyc06g007370.1 91 154 110 206 150 85 74 60 191 117 93 114 83 113 215 6,7-dimethyl-8-ribityllumazine synthase (AHRD V3.3 *** A0A061GZ51_THECC) AT2G30230 Solyc06g007380.1 0 11 15 5 2 14 8 14 9 1 1 5 0 4 0 Methyltransferase (AHRD V3.3 *** Q9M005_ARATH) Solyc06g007390.4 41 8 19 2 0 2 0 5 2 9 0 2 32 4 15 LOB domain-containing protein 15 (AHRD V3.3 *** A0A2G2Z7B6_CAPAN) AT2G30340 Solyc06g007395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g007420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 YLP motif-containing protein 1-like (AHRD V3.3 --* XP_022735260.1) Solyc06g007430.3 1570 553 574 425 294 321 357 279 471 661 609 352 432 666 1032 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2WHP7_CAPBA) AT5G58380 Solyc06g007440.4 135 95 183 132 20 29 19 6 48 111 76 18 88 62 55 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G3C4Q5_CAPCH) Solyc06g007450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g007460.3 328 336 286 274 380 417 423 352 267 202 314 226 406 327 288 EPIDERMAL PATTERNING FACTOR-like protein 6 (AHRD V3.3 *** A0A2G2WHG3_CAPBA) Solyc06g007470.3 14537 12843 12277 9901 9599 11469 10045 9198 6902 8318 9090 8060 12694 10710 12108 40S ribosomal protein S26 (AHRD V3.3 *** A0A2G2X986_CAPBA) AT3G56340 Solyc06g007480.3 667 506 607 479 562 493 422 578 426 499 458 489 674 441 541 chromatin-remodeling complex subunit ies6 (AHRD V3.3 *** A0A2I4H237_9ROSI) AT4G38495 Solyc06g007490.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3A7C5_CAPAN) Solyc06g007493.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin-conjugating enzyme (AHRD V3.3 *-* A0A200R7K5_9MAGN) Solyc06g007497.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200R7K5_9MAGN) Solyc06g007510.3 57123 19358 17355 18763 11601 10464 9252 8963 12945 18855 19395 13801 13270 12791 20006 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200PUP4_9MAGN) Solyc06g007520.4 2289 6030 5000 4433 5846 5828 6166 6427 3873 3766 3330 4557 7685 6238 4443 60S ribosomal protein L10 (AHRD V3.3 *** A0A2G2Z7S9_CAPAN) AT1G26910 Solyc06g007530.2 66 290 333 307 485 666 579 437 221 130 315 376 114 224 208 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3AS81_CEPFO) AT5G58280 Solyc06g007540.3 444 972 972 1322 1196 1117 1277 926 786 712 981 813 1025 806 824 Cytochrome b-c1 complex subunit 8 (AHRD V3.3 *** A0A1U8H2J1_CAPAN) AT5G05370 Solyc06g007545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) Solyc06g007550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF760 domain-containing protein (AHRD V3.3 *** A0A1Q3CD93_CEPFO) AT3G07310 Solyc06g007560.3 2 0 0 0 0 0 2 0 0 0 0 0 0 1 0 DUF760 domain-containing protein (AHRD V3.3 *** A0A1Q3CD93_CEPFO) AT3G07310 Solyc06g007570.3 958 1848 1368 1222 1624 1531 1808 1785 1359 931 1172 1266 1939 1728 1388 40S ribosomal protein S8 (AHRD V3.3 *** Q0JDZ7_ORYSJ) AT5G59240 Solyc06g007580.1 1764 534 519 465 346 308 362 280 418 1518 1247 516 156 569 1912 PDDEXK-like protein (AHRD V3.3 *** A0A2U1LF29_ARTAN) AT3G07350 Solyc06g007590.3 608 448 685 642 546 587 576 456 412 621 748 558 428 434 565 Histidine triad (HIT) protein (AHRD V3.3 *** A0A200PYI9_9MAGN) AT5G48545 Solyc06g007600.3 587 243 357 460 298 206 202 185 177 400 376 383 332 342 556 hypothetical protein (AHRD V3.3 --* AT1G67910.2) Solyc06g007610.2 2797 2188 4981 2849 6632 6921 6051 6811 1343 2805 2067 4024 3311 3360 2775 Glyoxalase-like domain (AHRD V3.3 *** A0A200QDW9_9MAGN) AT5G48480 Solyc06g007620.3 668 338 682 276 328 322 309 223 299 308 1274 338 176 250 383 DUF538 domain-containing protein (AHRD V3.3 *** A0A1Q3BSI7_CEPFO) Solyc06g007630.1 263 395 389 340 326 401 360 421 428 274 428 338 463 355 229 2Fe-2S ferredoxin-like superfamily protein (AHRD V3.3 *** Q9SRR8_ARATH) AT3G07480 Solyc06g007640.3 27060 17030 16109 15084 14391 15488 14453 14727 15978 18212 17279 17274 18738 17004 14829 FRIGIDA-like protein (AHRD V3.3 *** A0A2G3C4G8_CAPCH) AT5G48385 Solyc06g007650.2 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4EEW3_9ROSI) AT1G05675 Solyc06g007660.2 1483 618 636 528 451 388 449 303 587 674 605 578 520 617 762 Mediator of RNA polymerase II transcription subunit 19a (AHRD V3.3 *** A0A2G3C4G7_CAPCH) AT5G12230 Solyc06g007670.4 7289 16583 13967 9505 17320 15450 15020 16208 10818 8940 9618 12010 17845 15337 10711 60S ribosomal protein L5-like (AHRD V3.3 *** A0A2I4G950_9ROSI) AT3G25520 Solyc06g007680.1 113 127 126 134 181 137 162 124 137 145 180 154 131 122 183 F-box/LRR-repeat protein 12 (AHRD V3.3 *** A0A2G2WHC5_CAPBA) AT3G07550 Solyc06g007690.1 23 19 54 49 30 34 48 17 19 21 39 30 43 47 35 Unknown protein Solyc06g007700.4 3479 2439 3527 2943 2449 2919 2751 2444 2144 2780 3852 2457 3141 2398 3397 Peroxisomal membrane protein 13 (AHRD V3.3 *-* A0A2G3C4I3_CAPCH) AT3G07560 Solyc06g007710.4 860 1780 1316 1043 1438 1258 1282 1656 1153 990 919 1297 1993 1636 1060 Mitochondrial import receptor subunit TOM40-1 (AHRD V3.3 *** A0A2G3C4I2_CAPCH) AT3G20000 Solyc06g007720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 orf187 (mitochondrion) (AHRD V3.3 *-* YP_009430358.1) Solyc06g007730.1 23 28 13 14 25 23 17 23 15 10 2 16 4 28 9 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2K3NHM2_TRIPR) Solyc06g007740.1 109 81 77 98 101 88 91 78 108 55 85 74 52 68 62 Pentatricopeptide repeat protein (AHRD V3.3 *** A0A2U1MNU4_ARTAN) AT1G12700 Solyc06g007760.4 429 882 747 651 1531 1177 1267 1687 896 792 605 1037 559 779 735 Ycf54-like protein (AHRD V3.3 *** B4FED9_MAIZE) AT5G58250 Solyc06g007770.3 187 193 154 187 297 236 206 252 350 331 245 380 175 312 130 ER lumen protein retaining receptor (AHRD V3.3 *** A0A200QBW0_9MAGN) AT3G25160 Solyc06g007780.3 1459 1343 1245 815 1041 969 1022 1104 710 693 802 989 1616 1538 1085 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *** F4J8X6_ARATH) AT3G25150 Solyc06g007790.1 6 43 64 99 100 120 88 78 64 63 85 52 23 19 260 acidic leucine-rich nuclear phosphoprotein 32 family B protein (AHRD V3.3 *-* AT3G25130.1) AT3G25130 Solyc06g007800.4 652 326 373 405 411 394 380 236 303 331 572 376 365 315 657 Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 (AHRD V3.3 *** A0A2U1PLN4_ARTAN) AT3G25120 Solyc06g007810.1 25 6 31 18 19 41 33 26 28 13 21 13 13 33 52 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QAS6_9MAGN) Solyc06g007820.1 7 10 19 11 5 16 12 15 13 16 4 13 15 4 6 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A1J3F0G2_NOCCA) Solyc06g007840.2 130 88 142 154 77 180 139 92 99 113 131 77 88 94 180 Auxin signaling F-box 1 (AHRD V3.3 *-* E1A6A3_ARATH) Solyc06g007850.3 107 82 55 102 111 83 99 79 89 63 58 89 71 96 67 Pentatricopeptide repeat protein (AHRD V3.3 *** A0A2U1MNU4_ARTAN) AT1G12700 Solyc06g007860.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bet v I domain (AHRD V3.3 *** A0A200PXK2_9MAGN) Solyc06g007870.3 336 426 299 415 466 390 415 444 371 334 332 438 468 426 395 E3 ubiquitin-protein ligase RNF4 (AHRD V3.3 *** A0A2I4H612_9ROSI) AT5G48655 Solyc06g007880.1 0 0 1 2 2 3 0 0 1 0 0 0 0 5 6 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LSG2_ARATH) Solyc06g007890.3 0 0 6 0 2 7 9 7 0 1 3 8 0 0 0 Gibberellin regulated protein (AHRD V3.3 *** A0A2U1LHI0_ARTAN) Solyc06g007910.4 67 258 564 651 805 845 686 551 341 241 508 387 285 516 501 Gibberellin regulated protein (AHRD V3.3 *** A0A2U1PE48_ARTAN) Solyc06g007920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin regulated protein (AHRD V3.3 *** A0A2U1PE48_ARTAN) Solyc06g007930.3 394 835 945 964 1172 1039 892 905 864 809 1083 868 1334 874 905 Cytochrome b5 (AHRD V3.3 *** A0A1U8GY41_CAPAN) AT2G32720 Solyc06g007950.2 2 18 3 13 19 6 8 10 17 11 8 12 27 12 12 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A2G2Z754_CAPAN) Solyc06g007960.4 55 37 28 73 33 16 20 15 39 28 38 3 127 80 92 O-methyltransferase (AHRD V3.3 *** A0A076NBT0_VACCO) Solyc06g007970.3 11 1 48 9 3 1 1 0 13 21 47 4 5 2 9 Protein SULFUR DEFICIENCY-INDUCED 1 (AHRD V3.3 *** A0A1U8GXQ8_CAPAN) AT5G48850 Solyc06g007980.4 1800 1810 2682 2782 2385 2193 2510 2273 3521 2737 3361 4026 1788 2717 3098 Sterol 3-beta-glucosyltransferase (AHRD V3.3 *** B6U4Q7_MAIZE) Solyc06g007990.4 76 79 88 87 94 82 84 71 72 78 130 69 53 66 57 transmembrane protein (AHRD V3.3 *** AT4G13220.1) AT4G13220 Solyc06g008010.3 577 462 695 658 490 493 539 439 466 465 505 469 442 553 664 Mediator of RNA polymerase II transcription subunit 18 (AHRD V3.3 *** A0A2G3C2Z8_CAPCH) AT2G22370 Solyc06g008020.3 300 321 350 274 252 299 289 259 223 177 301 236 523 298 201 Zinc finger, HIT-type (AHRD V3.3 *** A0A2U1KRI5_ARTAN) AT4G28820 Solyc06g008030.3 1014 419 895 1167 206 260 315 138 888 1182 1608 572 442 1141 2071 bHLH transcription factor 041 AT2G20180 Solyc06g008040.3 1282 1219 1168 1388 1240 1396 1524 1420 1366 1425 1118 1243 1105 1189 1344 CLIP-associated protein (AHRD V3.3 *** A0A2G3C415_CAPCH) AT2G20190 Solyc06g008050.4 5 0 11 7 0 0 3 0 0 2 0 4 2 5 4 Flavin-containing monooxygenase (AHRD V3.3 *** D2IGV3_SOLLC) AT5G43890 Solyc06g008053.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LF16_TRIPR) Solyc06g008057.1 1 0 0 3 0 0 0 0 1 0 0 0 6 0 0 Unknown protein Solyc06g008080.2 3 2 13 15 2 1 4 8 5 1 0 4 0 3 0 Cullin-1 (AHRD V3.3 *-* A0A2G2ZF41_CAPAN) AT1G59800 Solyc06g008090.3 814 588 621 721 471 524 571 513 749 849 707 669 650 648 846 Myosin (AHRD V3.3 *** W5ZTD6_MAIZE) AT5G43900 Solyc06g008100.3 10 3 33 17 16 5 8 10 9 25 12 32 12 10 10 Unknown protein Solyc06g008110.4 2390 1688 1237 1290 1088 1134 1125 1375 1270 1409 967 1370 1564 1573 1457 WD40 repeat (AHRD V3.3 *** A0A200PVQ0_9MAGN) AT2G20330 Solyc06g008120.1 656 884 833 858 855 895 906 711 710 626 805 770 891 754 949 mitochondrial import receptor subunit TOM9-2 (AHRD V3.3 *** A0A1S4DGA3_TOBAC) AT5G43970 Solyc06g008130.4 726 741 1014 713 841 964 958 854 714 695 785 834 764 802 873 SET-domain containing protein lysine methyltransferase family protein (AHRD V3.3 *-* F4K7E3_ARATH) Solyc06g008140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L16 (AHRD V3.3 *-* A0A290WKW7_SOLLC) Solyc06g008150.3 738 1491 1096 1117 1094 1197 1039 1293 1270 975 857 1330 1672 1636 794 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) AT4G08430 Solyc06g008160.4 250 744 655 596 935 869 892 953 803 391 632 635 596 768 531 Protein FLUORESCENT IN BLUE LIGHT, chloroplastic (AHRD V3.3 *** A0A2G3C412_CAPCH) AT3G14110 Solyc06g008170.3 1194 3373 3774 3156 4760 5400 5465 4231 2212 1697 2728 2771 3670 3724 3212 Ribosomal protein L17 (AHRD V3.3 *** Q5I7K4_WHEAT) AT2G33370 Solyc06g008180.3 128 40 34 70 51 51 43 42 25 39 63 63 18 52 51 Unknown protein Solyc06g008190.1 18 24 36 18 26 25 34 26 20 30 10 21 19 30 17 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3C427_CAPCH) AT1G13040 Solyc06g150101.1 39 53 113 64 44 82 71 37 56 30 107 51 69 81 114 Unknown protein Solyc06g008200.3 527 443 373 432 322 303 357 356 346 345 324 313 555 469 428 Transcription repressor KAN1 (AHRD V3.3 *** A0A2G2X4M7_CAPBA) AT4G28610 Solyc06g008210.4 303 612 449 382 773 580 704 724 547 336 344 658 382 731 228 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein (AHRD V3.3 *** A0A1J3HZN2_NOCCA) AT1G04020 Solyc06g008220.4 948 1235 972 1049 1240 1149 1047 1161 869 842 714 1237 1278 1357 893 Multiple organellar RNA editing factor 2, chloroplastic (AHRD V3.3 *** A0A2G3C3Y9_CAPCH) AT2G33430 Solyc06g008230.3 280 191 247 282 155 175 144 143 211 208 236 159 254 312 257 tetratricopeptide repeat protein 7A-like (AHRD V3.3 *** A0A2I4F6F8_9ROSI) AT4G28600 Solyc06g008240.3 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 CRIB domain-containing protein RIC6 (AHRD V3.3 *** A0A2G2Z6W9_CAPAN) AT4G28556 Solyc06g008250.3 85 142 143 221 152 198 242 224 224 119 190 172 126 143 213 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1P1B5_ARTAN) AT2G20440 Solyc06g008260.3 1743 3004 3287 2460 3453 4154 3667 3147 2005 1714 2886 2303 3522 3269 2750 Ribosomal protein L14 (AHRD V3.3 *** A0A200PVX1_9MAGN) AT2G20450 Solyc06g008270.2 89 103 64 22 1 7 4 4 37 195 28 35 72 62 18 Cladosporium fulvum resistance 2.2 Solyc06g008280.2 200 170 197 198 116 92 117 124 198 197 166 187 357 178 147 Vacuolar protein sorting-associated protein 2-like protein 2 (AHRD V3.3 *-* A0A1U8H4S1_CAPAN) Solyc06g008300.4 546 254 238 302 12 13 20 12 229 340 531 190 346 262 272 Hcr2-5D (AHRD V3.3 *** Q9ZTJ6_SOLLC) Solyc06g008310.3 806 921 598 639 646 644 593 728 613 640 379 660 1009 944 712 Elongator complex protein 2 (AHRD V3.3 *** A0A2I0VIP5_9ASPA) AT1G49540 Solyc06g008320.4 516 527 697 718 824 1071 912 772 649 523 658 620 771 683 765 Casein kinase I isoform epsilon (AHRD V3.3 *** A0A1U8GXW0_CAPAN) AT4G14340 Solyc06g008330.2 39 119 65 150 209 309 277 238 158 71 92 124 120 139 90 Serine/threonine-protein kinase (AHRD V3.3 *** A0A2I0WHR6_9ASPA) AT1G03920 Solyc06g008340.4 693 559 556 629 435 570 607 521 559 602 658 591 575 511 760 Adaptin ear-binding coat-associated protein (AHRD V3.3 *** A0A2K3NQR5_TRIPR) AT1G03900 Solyc06g008350.3 227 174 169 151 161 193 174 116 148 137 139 148 205 180 153 Serine-threonine protein kinase (AHRD V3.3 *** A0A2U1MEB6_ARTAN) AT2G20495 Solyc06g008360.3 54 25 47 64 13 4 14 1 7 31 46 11 48 30 30 NAC domain-containing protein (AHRD V3.3 *-* A0A2U1MZK2_ARTAN) AT4G28530 Solyc06g008362.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc06g008364.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: uncharacterized protein LOC109847628 (AHRD V3.3 *-* XP_020272449.1) Solyc06g008366.1 42 41 58 27 76 43 49 25 24 42 38 31 57 27 46 Unknown protein Solyc06g008368.1 11 9 9 14 11 32 12 16 13 16 14 15 11 1 11 Plant resistance protein (AHRD V3.3 *-* O81136_SOLLC) Solyc06g008410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant resistance protein (AHRD V3.3 *-* O81136_SOLLC) Solyc06g008420.2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 L-aspartate oxidase (AHRD V3.3 *-* A0A2G3CU94_CAPCH) Solyc06g008440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin signaling F-box 1 (AHRD V3.3 *-* E1A6A3_ARATH) Solyc06g008460.3 0 0 0 0 0 0 1 0 0 0 0 1 1 3 0 Protein TRANSPORT INHIBITOR RESPONSE 1 (AHRD V3.3 *-* A0A2G2Z7A0_CAPAN) Solyc06g008470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Auxin signaling F-box 1 (AHRD V3.3 *-* E1A6A3_ARATH) Solyc06g008490.3 844 696 798 738 661 786 749 676 686 689 815 706 589 597 738 Transcription factor jumonji (Jmj) family protein / zinc finger (C5HC2 type) family protein (AHRD V3.3 *** A0A1P8AMS3_ARATH) Solyc06g008500.3 71 352 521 468 810 812 868 624 515 225 528 568 238 475 387 Ankyrin repeat-containing protein (AHRD V3.3 *-* A0A2U1M3J2_ARTAN) Solyc06g008510.3 90 847 1384 1138 2353 1843 1977 2157 1503 982 1020 2186 812 1407 400 Cdt1-like protein chloroplastic-like (AHRD V3.3 *** A0A2K3MWV0_TRIPR) AT2G31270 Solyc06g008520.4 682 308 373 338 304 316 313 325 302 385 367 318 310 298 478 Bet1-like SNARE 1-1 (AHRD V3.3 *** A0A2G3CVD5_CAPCH) AT3G58170 Solyc06g008530.3 174 217 186 329 208 172 156 161 169 104 116 147 187 273 331 Unknown protein Solyc06g008535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc06g008540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g008550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g008560.2 9 21 16 23 13 18 24 13 26 19 45 9 8 14 55 ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function%2C DUF547) (AHRD V3.3 *** AT2G39690.1) AT2G39690 Solyc06g008570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 collagen alpha-1(II) chain (AHRD V3.3 *-* XP_012092475.2) Solyc06g008580.3 45 80 3 149 112 91 92 70 96 61 65 65 22 93 167 auxin-regulated IAA22 Solyc06g008590.3 21 55 37 91 20 18 4 9 104 53 167 30 16 24 54 auxin-regulated IAA17 Solyc06g008600.3 519 718 726 865 865 863 843 740 951 799 836 898 598 789 798 E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *** A0A2G2X5V3_CAPBA) AT2G30580 Solyc06g008610.3 1979 1529 1946 1399 1342 1555 1520 1349 1143 1115 1167 1146 2099 1600 1735 WRKY transcription factor 21 AT2G30590 Solyc06g008620.1 337 376 95 81 129 115 122 142 141 1156 87 109 993 300 144 TolB protein-related protein (AHRD V3.3 *** A0A2U1LVX5_ARTAN) AT4G01870 Solyc06g008625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major pollen allergen Ole e 6 (AHRD V3.3 *** A0A2G3C3U1_CAPCH) Solyc06g008640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major pollen allergen Ole e 6 (AHRD V3.3 *** A0A2G3C3U1_CAPCH) Solyc06g008650.4 0 0 7 0 0 0 3 0 0 1 0 0 0 0 0 Major pollen allergen Ole e 6 (AHRD V3.3 *** A0A2G2Z6T6_CAPAN) Solyc06g008660.3 0 0 9 1 4 5 3 1 0 0 1 0 0 1 0 major pollen allergen Ole e 6-like (AHRD V3.3 -** XP_019069903.1) Solyc06g150102.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g008667.1 0 0 5 0 0 0 2 0 0 0 0 0 0 1 0 Major pollen allergen Ole e 6 (AHRD V3.3 *** A0A2G3C3U1_CAPCH) Solyc06g008680.3 0 11 19 8 2 0 1 0 0 0 0 0 0 0 0 Major pollen allergen Ole e 6 (AHRD V3.3 *** A0A2G3C3U1_CAPCH) Solyc06g008690.1 331 237 295 201 195 219 187 229 244 287 318 203 195 263 222 F-box/kelch-repeat protein SKIP30 (AHRD V3.3 *** A0A2G2WH54_CAPBA) AT3G63220 Solyc06g008700.3 731 1009 812 708 657 639 771 560 580 432 531 590 1325 1177 862 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit (AHRD V3.3 *** A0A2G2WH19_CAPBA) AT1G03110 Solyc06g008710.3 66 113 138 176 212 188 177 148 129 79 146 137 162 157 148 Cullin 1 (AHRD V3.3 *** X5I3P5_PETHY) Solyc06g008720.4 1592 1143 1102 1058 846 1101 1176 904 1374 1020 1001 910 892 1230 1466 Zinc finger, CW-type (AHRD V3.3 *-* A0A2U1Q0I4_ARTAN) AT3G62900 Solyc06g008730.3 846 526 532 555 552 672 673 640 659 683 490 591 513 557 498 Peroxisome biogenesis protein 6 (AHRD V3.3 *** A0A2G3C3V9_CAPCH) AT1G03000 Solyc06g008740.3 1197 956 839 1165 1569 1334 1608 1615 829 1368 993 1129 1010 650 1043 Zinc finger transcription factor 40 AT2G47850 Solyc06g008750.1 4 0 1 1 0 0 0 1 0 0 0 0 0 1 0 Glutaredoxin (AHRD V3.3 *** A0A2G9H0Z3_9LAMI) AT3G62950 Solyc06g008760.1 144 144 318 510 16 25 10 12 46 91 111 71 255 228 713 Glutaredoxin (AHRD V3.3 *** B3F8F2_SOLTU) AT2G47880 Solyc06g008765.1 11 12 17 30 13 35 26 4 15 12 8 14 26 17 15 Root-knot nematode resistance protein (AHRD V3.3 *-* O81137_SOLLC) Solyc06g008780.3 1 0 0 0 0 0 0 0 0 0 0 1 0 3 0 Protein TRANSPORT INHIBITOR RESPONSE 1 (AHRD V3.3 *** A0A2G3AS90_CAPCH) Solyc06g008785.1 119 121 60 122 51 71 45 16 73 88 122 73 159 103 120 Plant resistance protein (AHRD V3.3 *** O81136_SOLLC) Solyc06g008810.3 709 733 1108 1104 1200 1390 1392 1270 656 656 690 895 712 803 915 Transport inhibitor response 1 (AHRD V3.3 *-* C7E4R3_TOBAC) Solyc06g008820.3 483 227 345 368 108 140 156 135 220 307 203 242 266 277 243 Na+/H+ antiporter 1 Solyc06g008830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK-related protein kinase (AHRD V3.3 *-* A0A1U8EC13_CAPAN) Solyc06g008840.3 2 41 69 49 86 73 82 74 60 15 51 49 27 69 20 BRCT domain-containing DNA repair protein (AHRD V3.3 *-* A0A1P8B7K8_ARATH) Solyc06g008850.3 817 616 636 623 606 586 524 524 615 516 658 480 609 551 629 DCD (Development and Cell Death) domain protein (AHRD V3.3 *-* F4IUS3_ARATH) AT2G32910 Solyc06g008860.3 1329 1739 1547 1701 1731 1878 1922 1797 1368 1458 1685 1367 1805 1673 1389 u1 small nuclear ribonucleoprotein C AT4G03120 Solyc06g008870.2 2994 1165 1299 1139 217 213 146 155 728 1686 1332 526 1405 1192 1292 Gibberellin receptor (AHRD V3.3 *** E3VJP7_9FABA) AT3G63010 Solyc06g008880.3 2138 1119 1129 1203 873 727 760 746 1275 1616 1456 1031 1162 1225 1412 WD40 repeat (AHRD V3.3 *** A0A200QLR8_9MAGN) AT4G03020 Solyc06g008890.4 60 85 120 73 31 66 33 37 80 59 137 64 58 72 59 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3LJ85_TRIPR) AT5G20050 Solyc06g008900.4 417 431 332 300 490 396 378 405 424 343 390 364 480 468 344 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8B7R8_ARATH) Solyc06g008910.2 0 0 6 0 0 0 0 0 0 0 0 0 0 0 12 Hexosyltransferase (AHRD V3.3 *** A0A2G3C3P2_CAPCH) AT3G06260 Solyc06g008920.3 392 607 690 721 790 892 758 871 687 486 718 893 430 767 414 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNF3_9MAGN) AT1G20560 Solyc06g008930.3 2 0 3 3 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc06g008940.4 310 656 536 402 387 380 401 474 459 315 431 468 1005 799 510 Elongation factor Tu (AHRD V3.3 *** A0A2G2VZZ7_CAPBA) AT4G02930 Solyc06g008950.2 1 1 0 4 1 0 8 0 2 0 0 3 0 0 0 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6P541_ACTCH) AT3G13140 Solyc06g008960.3 1573 778 667 719 589 711 744 561 703 921 734 647 550 721 857 mediator of RNA polymerase II transcription subunit 33A-like (AHRD V3.3 *** A0A2I4F330_9ROSI) Solyc06g008970.4 396 435 341 382 414 511 541 429 400 297 346 351 438 381 338 RNA helicase DEAH-box18 AT1G03190 Solyc06g008980.3 161 818 973 1427 2066 2314 2239 2055 851 469 973 1176 88 518 525 Heat-inducible transcription repressor (AHRD V3.3 *-* A0A1P8BB54_ARATH) AT4G02800 Solyc06g008990.1 1 5 0 1 5 0 0 0 1 0 0 0 0 0 0 Fantastic four-like protein (AHRD V3.3 *-* A0A2K3NF15_TRIPR) Solyc06g009000.1 189 13 0 8 0 4 4 0 3 14 18 1 12 12 16 DUF581 domain-containing protein (AHRD V3.3 *** A0A1Q3D4G2_CEPFO) Solyc06g009010.1 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B-1 (AHRD V3.3 *** A0A2G2WGM1_CAPBA) AT2G47810 Solyc06g009015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) ATMG00240 Solyc06g009020.2 3289 5144 3487 3611 4990 4570 4918 4948 4664 5463 3377 4539 12366 4567 3128 Glutathione S-transferase (AHRD V3.3 *** A0A2G3C3Q3_CAPCH) AT2G47730 Solyc06g009040.4 6 21 5 4 3 0 4 0 8 83 14 0 156 21 14 Glutathione S-transferase (AHRD V3.3 *** A0A2G3C3Q3_CAPCH) AT2G47730 Solyc06g009050.3 105 96 181 238 48 54 60 33 90 84 199 48 101 86 212 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** O82240_ARATH) Solyc06g009060.4 6998 7010 6372 5349 5549 5457 5851 6218 6294 5954 6093 6816 7497 7458 6185 Serine/arginine-rich-splicing factor SR34 (AHRD V3.3 *-* A0A0M8KRE5_NICAT) Solyc06g009070.3 676 452 318 343 360 283 304 367 380 323 390 443 322 522 410 Zinc finger transcription factor 41 AT2G47680 Solyc06g009080.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *-* A0A2U1L838_ARTAN) Solyc06g009090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *-* A0A2U1QF58_ARTAN) Solyc06g009110.3 211 162 434 191 35 58 37 43 151 372 269 95 264 194 113 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1QF58_ARTAN) AT1G44130 Solyc06g009120.3 589 583 280 504 627 710 608 790 407 674 317 546 438 277 300 LYR motif protein (AHRD V3.3 *** AT4G02425.1) AT4G02425 Solyc06g009130.3 292 371 472 523 391 385 446 392 565 456 522 548 355 477 458 Magnesium/proton exchanger family member (AHRD V3.3 *** K4C3U3_SOLLC) AT2G47600 Solyc06g009140.3 1555 555 1061 254 0 4 3 2 77 256 1829 237 188 354 696 Late embryogenesis abundant protein Lea5 (AHRD V3.3 *** A0A1J3JXG8_NOCCA) AT4G02380 Solyc06g009150.1 10 0 3 16 0 0 0 1 2 8 8 5 6 8 17 DUF538 family protein (AHRD V3.3 *** B6SJU2_MAIZE) Solyc06g009160.4 563 316 455 472 180 314 316 246 387 388 387 366 323 383 562 Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a (AHRD V3.3 *** A0A2G2WGU7_CAPBA) Solyc06g009170.3 1925 1134 638 853 653 616 601 733 784 955 518 611 1212 1001 994 Epoxide hydrolase 2 (AHRD V3.3 *** B6T857_MAIZE) AT4G02340 Solyc06g009180.3 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G3CT93_CAPCH) AT1G02810 Solyc06g009190.4 316 808 1186 1356 385 377 486 365 2381 1455 1912 1572 1035 1188 3216 Pectinesterase (AHRD V3.3 *** A0A2G3C3P4_CAPCH) AT4G02320 Solyc06g009195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3MQI8_TRIPR) ATMG00860 Solyc06g009200.3 0 1 0 5 0 0 0 0 1 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** B4FX45_MAIZE) AT1G02790 Solyc06g009210.4 10523 15014 15836 10487 16223 16835 15321 15458 13012 9067 12759 12282 18012 15393 14711 Ribosomal protein L19 (AHRD V3.3 *** A0A2G2WGH9_CAPBA) AT1G02780 Solyc06g009220.4 612 1053 750 882 1013 998 1107 1076 1062 971 775 1083 1041 1138 713 Isoamylase 3, chloroplastic (AHRD V3.3 *** A0A2G2Z288_CAPAN) AT4G09020 Solyc06g009240.4 0 0 5 0 0 0 0 0 1 0 0 0 0 0 0 cation/H(+) antiporter 15-like (AHRD V3.3 *** A0A2I4F7D2_9ROSI) Solyc06g009250.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/LRR-repeat protein (AHRD V3.3 *-* A0A1U8G7I8_CAPAN) Solyc06g009260.3 48 63 47 43 63 41 33 40 38 45 39 60 35 64 38 Unknown protein Solyc06g009270.3 564 450 900 495 400 445 395 471 531 769 562 404 504 516 378 Diacylglycerol kinase (AHRD V3.3 *** A0A2G3ATC8_CAPCH) AT4G30340 Solyc06g009280.1 0 1 1 2 2 10 6 3 2 0 22 5 0 3 14 ABC transporter B family member (AHRD V3.3 *** A0A2K3NLX3_TRIPR) AT3G62150 Solyc06g009290.4 385 392 202 143 43 26 57 39 222 446 324 45 868 284 387 ABC transporter B family member (AHRD V3.3 *** A0A2K3NLX3_TRIPR) AT3G62150 Solyc06g009330.3 315 200 297 305 234 198 202 200 202 288 262 225 202 186 147 Two-pore potassium channel 3 (AHRD V3.3 *** A0A2G2Z6E4_CAPAN) AT4G01840 Solyc06g009335.1 59 36 74 73 56 55 51 41 51 24 105 44 62 53 72 Unknown protein Solyc06g009340.4 233 177 291 348 280 291 350 200 237 213 367 214 208 214 371 Chaperone DnaJ-domain superfamily protein (AHRD V3.3 *** A0A2U1QET4_ARTAN) AT3G62190 Solyc06g009370.4 2073 920 913 1170 746 841 834 988 1290 2493 1458 1348 797 1187 2158 Protein TolB (AHRD V3.3 *-* A0A1J3FQ33_NOCCA) Solyc06g009380.3 832 715 628 1023 770 813 783 676 1068 1872 1438 859 831 857 853 transmembrane protein (AHRD V3.3 *** AT1G10660.4) AT2G47115 Solyc06g009390.3 81 82 58 99 89 81 81 72 104 97 95 83 108 82 80 Protein phosphatase-2C (AHRD V3.3 *** O82469_MESCR) AT3G62260 Solyc06g009400.3 1294 1434 3372 3527 4739 3803 4533 2863 2264 2203 3724 3061 1811 2440 2939 PII-like protein AT4G01900 Solyc06g009410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 57 Solyc06g009420.4 218 187 109 140 122 120 156 136 146 111 153 118 162 189 170 Unknown protein Solyc06g009430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 10 14 Transcription factor (AHRD V3.3 *** A0A2G2Z6G1_CAPAN) Solyc06g009440.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200QRY0_9MAGN) Solyc06g009450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g009470.1 0 1 0 0 0 3 1 0 1 0 0 2 0 0 0 Unknown protein Solyc06g009480.3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 24 Solyc06g009490.3 104 139 76 110 149 82 117 118 65 58 91 100 103 133 115 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200QRY0_9MAGN) Solyc06g009500.1 42 50 67 42 22 27 30 30 40 57 52 22 48 54 16 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QRY0_9MAGN) Solyc06g009510.1 0 0 0 0 1 0 0 0 6 0 0 0 0 0 0 transcription factor UPBEAT1 (AHRD V3.3 *-* A0A2I4GEI3_9ROSI) AT2G47270 Solyc06g009520.3 1318 905 777 1137 887 774 802 1119 982 1645 812 1061 719 870 1001 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1PBI6_ARTAN) AT2G31400 Solyc06g009530.3 3323 4185 2954 3370 3050 3715 3882 3590 2995 3160 3033 3359 3854 4164 3824 Carbohydrate-binding-like fold (AHRD V3.3 *** A0A061DSB9_THECC) AT3G62360 Solyc06g009540.1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase FERONIA (AHRD V3.3 *** A0A1U8FIN9_CAPAN) Solyc06g009550.4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase ANXUR2 (AHRD V3.3 *-* A0A2G2WHC2_CAPBA) Solyc06g009580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A1P8J7V1_9ROSI) Solyc06g009585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 replication protein A 70 kDa DNA-binding subunit B-like (AHRD V3.3 *-* XP_020258649.1) Solyc06g009600.2 0 2 0 14 36 31 15 13 7 4 0 8 0 3 0 HIT zinc finger and PAPA-1-like domain-containing protein (AHRD V3.3 *-* F4I548_ARATH) Solyc06g009610.1 0 0 0 0 0 0 1 0 0 0 0 3 0 0 0 Transcription factor GRAS (AHRD V3.3 *** A0A200PWC4_9MAGN) Solyc06g009620.1 17 59 67 91 87 152 96 94 66 47 74 100 70 98 59 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q0B6_9MAGN) AT1G09220 Solyc06g009630.1 2061 2334 2550 2297 2371 1903 1974 2222 3175 2310 2863 2707 2635 2454 3112 Calvin cycle protein cp12 chloroplastic-like (AHRD V3.3 *-* A0A2K3LA45_TRIPR) AT3G62410 Solyc06g009640.2 386 273 604 365 278 347 327 249 291 246 612 221 294 316 477 Basic-leucine zipper domain-containing protein (AHRD V3.3 *** A0A2U1LZP6_ARTAN) AT3G62420 Solyc06g009645.1 149 108 73 103 95 85 104 106 60 110 137 93 50 79 73 Unknown protein Solyc06g009650.3 1573 1623 1812 1923 1795 1837 1825 1655 1408 1587 2078 1504 2111 1805 2066 Vacuolar protein sorting-associated protein 51-like protein (AHRD V3.3 *** A0A2S1CER7_PRUYE) AT4G02030 Solyc06g009660.3 208 501 402 379 588 536 569 590 404 360 308 463 615 484 263 GTP-binding protein (AHRD V3.3 *** Q9SDK4_ORYSJ) AT3G62560 Solyc06g009670.3 27 39 179 88 42 75 57 38 73 30 113 53 20 36 26 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1LZR6_ARTAN) AT2G47440 Solyc06g009680.4 1212 811 727 615 655 666 660 711 666 743 561 710 667 722 524 BRCT domain-containing protein (AHRD V3.3 *** A0A1U8F8H4_CAPAN) AT4G02110 Solyc06g009690.3 323 264 219 246 227 194 276 251 264 383 81 329 239 258 185 ARM repeat superfamily protein (AHRD V3.3 *** AT2G39910.1) AT2G39910 Solyc06g150103.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 4, partial (AHRD V3.3 *-* XP_006847242.1) Solyc06g150104.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidylprolyl isomerase (AHRD V3.3 *-* A0A2G3B075_CAPCH) Solyc06g009710.4 4 18 33 40 42 34 25 29 19 10 7 35 7 16 27 R2R3MYB transcription factor 111 AT5G49330 Solyc06g009750.4 866 915 741 682 676 633 643 694 876 889 589 846 986 964 815 importin alpha Solyc06g009760.1 23 152 166 576 405 297 289 297 134 392 207 192 64 87 73 leucine-rich repeat extensin-like protein 3 (AHRD V3.3 --* XP_010321923.1) Solyc06g009770.1 1 5 6 7 8 8 9 5 7 4 13 5 10 3 5 hypothetical protein (AHRD V3.3 *** AT3G62650.2) AT2G47485 Solyc06g009780.4 94 786 544 558 1083 1102 1290 1051 598 272 466 543 394 585 553 Kinesin-4 (AHRD V3.3 *** A0A2G2WGI9_CAPBA) AT2G47500 Solyc06g009785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc06g009790.4 685 887 1467 1461 1620 1988 1899 1386 926 699 1290 1033 877 1085 1177 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1PV10_ARTAN) AT3G16850 Solyc06g009800.3 46 52 36 51 52 50 53 73 32 23 80 63 44 64 46 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CFE3_CAPCH) AT1G74630 Solyc06g009803.1 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 Unknown protein Solyc06g009807.1 12 6 10 14 29 29 19 15 12 1 58 12 8 20 20 Unknown protein Solyc06g009810.4 19 16 19 32 0 0 0 0 5 4 11 13 5 24 28 ethylene-responsive transcription factor CRF1 (AHRD V3.3 --* XP_004245542.1) Solyc06g009815.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc06g009820.3 278 227 147 206 191 196 234 161 191 209 237 234 227 228 343 Fumarate hydratase class II (AHRD V3.3 *-* A0A248JQX4_9PROT) Solyc06g009830.3 16 18 22 28 10 27 21 23 27 12 41 25 15 42 27 Fumarate hydratase class II (AHRD V3.3 *-* A0A318TWL7_9RHOB) Solyc06g009840.3 11 7 30 28 4 21 24 18 13 17 14 35 21 23 18 Fumarate hydratase class II (AHRD V3.3 *-* A0A2T1B859_9BURK) Solyc06g009850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfurtransferase (AHRD V3.3 *-* A0A2U1KUA9_ARTAN) Solyc06g009860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfurtransferase (AHRD V3.3 *-* A0A2U1N4A4_ARTAN) Solyc06g009870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SKP1-like protein (AHRD V3.3 *** C3V9V9_CITMA) Solyc06g009880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SKP1-like protein (AHRD V3.3 *** C3V9V9_CITMA) Solyc06g009890.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g009900.3 69 87 76 82 42 96 95 92 72 57 51 143 56 66 29 Protein emsy-like 3 (AHRD V3.3 *** A0A314L238_NICAT) Solyc06g009905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g009920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *-* A0A2G2XP32_CAPBA) Solyc06g009930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g009940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* J7H3U2_CAPAN) Solyc06g009950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A0N9DZT7_9MAGN) Solyc06g009960.3 25 28 35 35 24 28 37 33 44 34 29 35 63 59 39 Elongation factor 1-alpha (AHRD V3.3 *** A0A2G3C6B0_CAPCH) Solyc06g009970.3 11055 23348 14485 13221 17636 15830 15958 18197 15447 11736 10906 13981 24192 19734 16082 Elongation factor 1-alpha (AHRD V3.3 *** A0A2G3C6B0_CAPCH) AT1G07920 Solyc06g009975.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc06g009980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g009983.1 651 452 499 465 423 528 490 306 385 285 478 337 403 417 653 Unknown protein Solyc06g009987.1 0 0 0 2 0 1 2 0 2 0 0 0 0 0 0 Unknown protein Solyc06g010000.3 1641 876 864 1036 586 723 753 466 699 821 821 662 625 939 1136 E3 SUMO-protein ligase SIZ1-like (AHRD V3.3 *** A0A1U8GWB2_CAPAN) AT5G60410 Solyc06g010010.3 3 4 0 2 0 0 2 0 2 0 0 2 0 0 8 MLO-like protein (AHRD V3.3 *** K4C428_SOLLC) AT3G45290 Solyc06g010020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g010030.4 141 74 95 50 2 13 14 11 14 52 31 25 119 106 53 MLO-like protein (AHRD V3.3 *** K4C430_SOLLC) AT1G61560 Solyc06g010040.3 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 Unknown protein Solyc06g010045.1 28 18 36 24 38 32 49 9 15 17 41 17 12 38 46 Unknown protein Solyc06g010060.1 508 413 289 337 364 246 250 326 274 400 241 187 467 372 275 Protein transport protein Sec61 subunit beta (AHRD V3.3 *-* A0A2G3C6S8_CAPCH) AT5G60460 Solyc06g150105.1 21 7 4 25 7 3 12 5 4 19 19 15 12 19 8 Unknown protein Solyc06g010090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 P-loop containing nucleoside triphosphate hydrolase (AHRD V3.3 *** A0A2U1N274_ARTAN) Solyc06g010100.2 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 E3 sumo-protein ligase siz1 (AHRD V3.3 *-* A0A1J6KG69_NICAT) Solyc06g010110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 P-loop nucleoside triphosphate hydrolase superfamily protein (AHRD V3.3 *-* A0A1P8BAQ8_ARATH) Solyc06g010120.1 0 1 0 0 0 1 3 0 0 1 0 0 0 4 0 UvrD-like Helicase, ATP-binding domain, P-loop containing nucleoside triphosphate hydrolase (AHRD V3.3 *-* A0A2U1PI50_ARTAN) Solyc06g010130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g010140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g010160.2 0 0 0 0 0 0 4 0 2 0 0 0 0 1 0 Nucleotide/sugar transporter family protein (AHRD V3.3 *-* A0A2U1QP35_ARTAN) Solyc06g010170.3 65 85 155 146 122 214 214 162 186 179 142 241 114 86 63 Lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** A0A1P8AMP7_ARATH) Solyc06g010180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cyclic nucleotide-gated channel 15 (AHRD V3.3 *-* A0A2U1M7X5_ARTAN) Solyc06g010190.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cyclic nucleotide-gated channel 15 (AHRD V3.3 *** A0A2U1M7X5_ARTAN) Solyc06g010240.3 3709 3060 2689 4418 3259 3691 3679 3531 2859 3305 3735 3380 2477 3161 2742 SNF2-related (AHRD V3.3 *-* A0A200R5T0_9MAGN) AT1G08060 Solyc06g010250.3 0 1 0 14 0 2 7 0 2 5 7 3 6 16 1 High-affinity nitrate transporter 2.2 (AHRD V3.3 *** NRT22_ORYSJ) Solyc06g010260.3 913 528 608 598 496 448 467 388 396 466 670 493 606 467 642 SNF1-related protein kinase regulatory subunit beta-3 (AHRD V3.3 *** A0A1U8GVS2_CAPAN) AT2G28060 Solyc06g010270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R5Q2_9MAGN) AT2G28050 Solyc06g010275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R5Q2_9MAGN) AT2G28050 Solyc06g011270.1 7 2 0 0 2 0 0 0 3 1 0 0 5 6 0 Unknown protein Solyc06g011275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3JUZ2_TRIPR) Solyc06g011280.3 6216 11053 6809 6066 7376 6300 5975 8168 6649 5970 4754 6611 11021 8738 6284 Elongation factor 1-gamma (AHRD V3.3 *** A0A2G2YHE8_CAPAN) AT1G09640 Solyc06g011290.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamine synthetase (AHRD V3.3 *-* I6WUR4_CAMSI) Solyc06g011320.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nodulin/glutamine synthase-like protein (AHRD V3.3 *-* F4J9A0_ARATH) Solyc06g011330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamine synthetase (AHRD V3.3 *-* I6WUR4_CAMSI) Solyc06g011340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g011350.3 90 162 20 88 19 29 31 32 110 218 32 82 541 86 107 plasma membrane intrinsic protein 2.4 AT3G53420 Solyc06g011360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g011370.4 210 142 61 104 77 60 46 99 210 149 37 177 148 135 91 Chaperone protein ClpB (AHRD V3.3 *-* B2IUM0_NOSP7) AT3G45450 Solyc06g011380.2 89 60 31 27 23 17 17 32 73 59 16 53 50 64 21 Chaperone protein ClpB (AHRD V3.3 *-* B2IUM0_NOSP7) Solyc06g011400.2 585 497 285 303 166 198 223 204 456 310 411 285 499 341 344 Chaperone protein ClpB (AHRD V3.3 *** B2IUM0_NOSP7) Solyc06g011403.1 164 102 100 75 62 117 110 71 96 80 114 113 120 88 64 paramyosin-like protein (AHRD V3.3 *** AT4G32560.2) AT4G32560 Solyc06g011405.1 18 10 17 24 1 29 23 17 6 7 30 11 2 5 12 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3J7R1_NOCCA) Solyc06g011407.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc06g011440.1 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Unknown protein Solyc06g011450.3 522 786 501 549 626 588 612 747 734 621 632 554 774 650 617 Clathrin assembly protein (AHRD V3.3 *** A0A2K3ND59_TRIPR) AT2G25430 Solyc06g011455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dynamin (AHRD V3.3 *-* E5GB64_CUCME) Solyc06g011500.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g011510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40S ribosomal protein S23 (AHRD V3.3 *-* A0A2G2YMF4_CAPAN) Solyc06g011520.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ACT domain-containing protein (AHRD V3.3 *** A0A1Q3AXU4_CEPFO) AT5G25320 Solyc06g011530.3 263 160 135 159 219 175 200 198 265 241 137 183 136 166 58 Hydroxymethylglutaryl-CoA lyase (AHRD V3.3 *-* B6U7B9_MAIZE) Solyc06g011540.4 802 424 548 616 461 628 761 317 439 493 738 457 355 309 514 Myosin family protein (AHRD V3.3 *-* A0A2U1N6F7_ARTAN) Solyc06g011560.3 507 452 350 558 308 428 427 418 299 508 315 308 393 305 512 transmembrane protein (AHRD V3.3 *** AT1G10660.4) Solyc06g011570.3 142 104 103 117 120 93 87 97 108 113 80 113 113 99 99 Haloacid dehalogenase-like hydrolase family protein (AHRD V3.3 *-* A0A2U1QHW6_ARTAN) Solyc06g011575.1 47 21 95 26 7 17 24 17 25 31 59 10 35 32 24 Unknown protein Solyc06g011580.1 0 0 0 1 0 0 0 0 0 2 0 3 1 0 0 Unknown protein Solyc06g011590.3 3 3 0 0 0 0 0 0 1 0 0 0 3 0 23 Major facilitator superfamily (AHRD V3.3 *** A0A2U1Q7R9_ARTAN) AT2G28120 Solyc06g011610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Purine permease (AHRD V3.3 *-* A0A2U1N6D8_ARTAN) AT2G05642 Solyc06g011620.1 0 0 0 3 0 0 0 0 1 1 0 3 1 0 0 ABC transporter C family member 4 (AHRD V3.3 *-* A0A2G3AL92_CAPAN) Solyc06g011630.1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 Chloride conductance regulatory protein ICln (AHRD V3.3 *-* A0A2G3CVQ4_CAPCH) Solyc06g011660.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 Protein zinc induced facilitator-like 1-like (AHRD V3.3 *-* A0A2K3NCG9_TRIPR) Solyc06g011661.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g011662.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g150106.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g011664.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g011665.1 1054 845 779 698 719 687 660 710 780 716 600 711 657 780 858 SIT4 phosphatase-associated family protein (AHRD V3.3 *** A0A2U1PT03_ARTAN) AT1G07990 Solyc06g011666.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g150107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc06g011668.1 5 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Unknown protein Solyc06g011669.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g011670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HOX32 (AHRD V3.3 *-* A0A2G3A6N3_CAPAN) Solyc06g024310.1 1 2 0 0 0 1 0 0 0 0 0 1 0 3 0 Glycosyltransferase-like (AHRD V3.3 *-* A0A2G2YNZ8_CAPAN) Solyc06g024320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016673.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016677.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016750.3 2309 1940 3667 1829 2029 2899 2077 1715 1957 946 4803 1809 2247 2590 5424 Nuclear factor Y, subunit C10 (AHRD V3.3 *-* A0A1P8AN83_ARATH) Solyc06g016760.3 405 443 298 300 590 506 483 563 392 549 395 431 533 404 253 gamma-secretase subunit (AHRD V3.3 *-* AT5G09310.1) Solyc06g016770.3 494 286 336 338 56 97 72 102 185 276 178 140 324 298 499 Zinc finger protein (AHRD V3.3 *** A0A200QI18_9MAGN) AT5G60580 Solyc06g016780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g016790.3 188 284 308 328 370 438 343 329 311 506 506 311 378 280 342 proline-rich receptor-like protein kinase PERK13 (AHRD V3.3 *** XP_004240680.1) AT3G45230 Solyc06g016820.1 10 5 2 3 1 4 8 2 3 1 8 1 0 0 0 Unknown protein Solyc06g016823.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase I-like protein (AHRD V3.3 --* NP_001315554.1) Solyc06g016827.1 1784 1607 1554 1680 1805 1734 1708 1758 1276 1432 1326 1339 1301 1312 1292 Unknown protein Solyc06g017860.3 5 0 0 2 0 0 0 0 0 0 0 0 0 10 12 Carboxypeptidase (AHRD V3.3 *** A0A2G3CAN0_CAPCH) Solyc06g017870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *-* A0A1U8GIG3_CAPAN) Solyc06g017920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g017940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein (AHRD V3.3 --* AT1G79840.6) Solyc06g017970.4 2022 2039 1670 1828 1725 1835 1800 2193 2319 1907 1640 2012 1970 2100 1540 TRAF-like family protein (AHRD V3.3 *** A0A2U1LVB2_ARTAN) AT2G25320 Solyc06g017973.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc06g017975.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g017977.1 121 101 118 162 28 45 31 28 96 46 114 71 62 174 293 Unknown protein Solyc06g018050.4 658 798 661 703 1047 860 910 896 739 744 757 849 840 870 742 Calcium uptake protein mitochondrial-like (AHRD V3.3 *** A0A2K3MWX9_TRIPR) Solyc06g018100.4 288 276 528 489 393 436 344 303 580 721 550 463 437 361 495 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1LY01_ARTAN) AT4G33490 Solyc06g018110.3 212 352 495 283 254 311 283 237 334 126 310 314 575 490 461 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* A0A2U1N2D5_ARTAN) AT3G55340 Solyc06g019130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g019140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g019160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g019170.3 1701 2396 2264 3196 4128 3897 4347 4025 3396 2502 2343 2960 4122 3771 5568 Delta-1-pyrroline-5-carboxylate synthase (AHRD V3.3 *** A0A0U1XEG4_LYCCN) AT2G39800 Solyc06g019190.1 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc06g019200.4 318 184 468 331 264 329 411 207 305 316 489 381 156 361 703 Ethylene-dependent gravitropism-deficient and yellow-green-like 2 (AHRD V3.3 *** F4K0T6_ARATH) AT5G05740 Solyc06g030470.4 274 307 1122 441 206 254 242 179 354 270 847 224 441 316 333 UPSTREAM OF FLC protein (DUF966) (AHRD V3.3 *** Q8GYT8_ARATH) Solyc06g030490.3 357 411 528 418 394 421 392 423 327 412 367 409 657 534 440 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A1U8FJZ4_CAPAN) AT2G39840 Solyc06g030510.4 504 365 402 359 439 497 481 368 279 313 513 408 374 397 380 HAT transposon superfamily (AHRD V3.3 *** A0A2U1MJ98_ARTAN) AT4G15020 Solyc06g030520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *-* O81746_ARATH) Solyc06g030540.4 78 72 76 34 51 39 40 60 100 102 76 90 84 79 42 Nucleolar histone methyltransferase-related protein (AHRD V3.3 *-* F4IG36_ARATH) AT1G45248 Solyc06g030550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g030570.3 520 578 474 602 637 463 562 601 526 569 460 431 616 667 564 Dual-specificity RNA methyltransferase RlmN (AHRD V3.3 *** A0A318RXP5_9GAMM) AT2G39670 Solyc06g030590.3 4 0 7 0 0 1 0 0 3 0 12 0 0 0 0 Long chain base biosynthesis protein 2a (AHRD V3.3 *** A0A2G3CXG9_CAPCH) Solyc06g030600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EIN3-binding F-box protein 1 (AHRD V3.3 *-* A0A2G2WKD4_CAPBA) Solyc06g030610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EIN3-binding F-box protein 1 (AHRD V3.3 *-* A0A2G2ZAK4_CAPAN) Solyc06g030620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EIN3-binding F-box protein 1 (AHRD V3.3 *-* A0A2G2ZAK4_CAPAN) Solyc06g030640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g030660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g031660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tubulin alpha chain (AHRD V3.3 *-* A5YRY0_POPTM) Solyc06g031670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2K3NR02_TRIPR) AT2G30630 Solyc06g031680.2 226 246 276 260 234 222 230 277 300 250 308 324 300 266 312 hepatocyte growth factor-regulated tyrosine kinase substrate isoform X4 (AHRD V3.3 *** A0A2I4EXI3_9ROSI) Solyc06g031690.4 388 295 620 557 357 527 572 354 423 335 737 377 372 484 776 Ankyrin repeat family protein (AHRD V3.3 *** A8MR72_ARATH),Pfam:PF13857 AT2G26210 Solyc06g031710.3 1 0 1 2 0 2 1 0 0 0 0 0 0 0 0 WAT1-related protein (AHRD V3.3 *** K4C4J4_SOLLC) Solyc06g031712.1 2 13 0 24 1 3 0 1 2 4 1 0 0 32 9 Unknown protein Solyc06g031714.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc06g031716.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g031718.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc06g033780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g033783.1 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 Unknown protein Solyc06g033787.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3MQ06_TRIPR) Solyc06g033790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding (AHRD V3.3 *-* A0A2R4QNH2_9POAL) Solyc06g052090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *-* A0A2I4GFY9_9ROSI) Solyc06g033810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *** A0A2I4GFY9_9ROSI) Solyc06g033815.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g033820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* Q33DU5_MUSAR) Solyc06g033825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 agamous-like MADS-box protein AGL66 (AHRD V3.3 *-* XP_019070464.1) Solyc06g033830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A0A2K3PNN3_TRIPR) Solyc06g033850.3 263 161 128 261 0 2 1 5 104 94 106 37 111 198 643 Dehydration-responsive element-binding protein 2d-like (AHRD V3.3 *-* A0A2K3MMA2_TRIPR) Solyc06g033860.2 78 61 69 24 1 2 3 5 44 151 15 11 244 51 40 Glutamate dehydrogenase (AHRD V3.3 *** A0A1U8GQ51_CAPAN) Solyc06g033870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 105 Solyc06g033880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g033890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase V subunit 7 (AHRD V3.3 *** A0A1U8FSY3_CAPAN) Solyc06g033895.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase ii subunit rpb7-like protein (AHRD V3.3 *** A0A2K3MTA8_TRIPR) AT4G14660 Solyc06g033900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA polymerase Rpb7 (AHRD V3.3 *-* A0A200Q4D7_9MAGN) Solyc06g033910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase ii subunit rpb7-like protein (AHRD V3.3 *** A0A2K3MTA8_TRIPR) Solyc06g033920.1 43 51 11 24 10 3 4 10 32 70 33 24 17 14 7 I-7-like protein (AHRD V3.3 *** A0A0K0VHQ1_SOLPN) Solyc06g033930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MPB2_TRIPR) Solyc06g033940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1S4C7G4_TOBAC) Solyc06g033950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat receptor protein kinase (AHRD V3.3 *-* A0A2R6PTX7_ACTCH) Solyc06g033955.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc06g033960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat receptor-like protein kinase family protein, putative (AHRD V3.3 *-* A0A061FQX7_THECC) Solyc06g033970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H domain (AHRD V3.3 *-* A0A200QTT8_9MAGN) Solyc06g033990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor MYB30 (AHRD V3.3 *** XP_004240768.1) Solyc06g034000.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 95 Solyc06g034010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g034020.3 820 499 598 662 458 528 519 516 592 637 603 508 489 480 622 Peptide methionine sulfoxide reductase MsrA (AHRD V3.3 *** A0A200QPG5_9MAGN) AT4G25130 Solyc06g034025.1 1 5 0 1 0 5 0 0 0 0 0 0 0 0 0 RNAse II-like 1 (AHRD V3.3 *-* AT4G15417.2) Solyc06g034030.3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G3C5X7_CAPCH) Solyc06g034040.1 102 43 13 68 0 0 0 0 15 43 73 5 4 32 27 Oleosin (AHRD V3.3 *** A0A2G3C5Y7_CAPCH) AT4G25140 Solyc06g034050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Purine permease (AHRD V3.3 *-* A0A2U1N6D8_ARTAN),Pfam:PF16913 Solyc06g034055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DEAD-box ATP-dependent RNA helicase 5 (AHRD V3.3 *-* A0A2G3AFR9_CAPAN) Solyc06g034070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication protein A 70 kDa DNA-binding subunit (AHRD V3.3 *-* A0A2U1P2G0_ARTAN) Solyc06g034073.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Telomere repeat-binding protein 1 (AHRD V3.3 *-* TRP1_ARATH) Solyc06g034077.1 213 168 192 130 127 173 155 126 180 131 176 128 174 204 263 Unknown protein Solyc06g034090.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g034100.4 415 357 363 349 348 241 270 368 332 358 250 329 464 401 445 Ubiquinol-cytochrome c chaperone (AHRD V3.3 *** A0A2U1NXA3_ARTAN) AT5G51220 Solyc06g034110.3 120 267 280 375 392 361 365 395 455 304 351 407 400 327 173 Tomato acid phosphatase AT4G25150 Solyc06g034120.4 703 623 742 743 756 747 798 774 811 632 710 836 692 780 747 Quinone oxidoreductase (AHRD V3.3 *** A0A1J3DL74_NOCCA) AT5G61510 Solyc06g034130.2 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 Late embryogenesis abundant protein-related / LEA protein-like protein (AHRD V3.3 *** A0A178VGJ3_ARATH) AT3G19430 Solyc06g034140.3 23 98 142 151 358 378 375 334 124 51 161 228 30 77 30 B3 domain-containing protein (AHRD V3.3 *** A0A2G2WIF4_CAPBA) Solyc06g034150.4 175 333 566 407 544 603 532 556 340 268 421 395 458 393 432 8-amino-7-oxononanoate synthase (AHRD V3.3 *** A0A2I4E918_9ROSI) AT5G04620 Solyc06g034160.3 1243 745 631 572 438 446 456 479 648 891 645 445 984 722 758 Autophagy-related protein 3 (AHRD V3.3 *** A0A2G2WIK5_CAPBA) AT5G61500 Solyc06g034170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *-* A0A1J3JBC9_NOCCA) Solyc06g034180.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** Q9FII8_ARATH) Solyc06g034200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Phosphate transporter (AHRD V3.3 *** Q9AYT3_TOBAC) Solyc06g034210.1 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 Unknown protein Solyc06g034220.3 628 638 524 528 755 645 632 696 675 562 458 644 760 809 538 Vesicle-associated protein 1-1 (AHRD V3.3 *** A0A1U8GX77_CAPAN) Solyc06g034230.2 504 694 412 448 503 336 351 450 401 319 306 525 464 406 344 Plant organelle RNA recognition domain containing protein (AHRD V3.3 *-* A0A2P5DMF4_TREOI) Solyc06g034233.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H (AHRD V3.3 *-* A0A2K3NX86_TRIPR) ATMG00310 Solyc06g034237.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H (AHRD V3.3 *-* A0A2K3PK80_TRIPR) Solyc06g034250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ikzf5 (DUF668) (AHRD V3.3 *-* AT1G34320.2) Solyc06g034255.1 8 1 4 6 0 2 1 3 1 7 16 12 3 3 0 Cytochrome 71D7 (AHRD V3.3 *-* A0A2G3C788_CAPCH) Solyc06g034290.3 261 119 250 277 37 23 35 18 35 113 166 14 516 316 215 Glycerol-3-phosphate transporter 1-like protein (AHRD V3.3 *** A0A2K3PR18_TRIPR) AT3G47420 Solyc06g034310.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3CYQ8_CEPFO) Solyc06g034320.1 291 214 193 240 186 223 180 131 154 261 211 203 208 212 197 transmembrane protein (AHRD V3.3 *** AT4G25225.1) AT4G25225 Solyc06g034330.5 1520 1136 1064 1216 1006 962 1116 871 1079 1271 1175 1016 1143 1163 1350 Unknown protein Solyc06g034340.3 1 23 33 32 60 36 47 29 24 28 37 16 17 18 65 NAC domain (AHRD V3.3 *-* A0A200R0S2_9MAGN) Solyc06g034350.2 0 0 0 0 0 1 3 1 0 1 1 0 10 0 0 Unknown protein Solyc06g034360.2 6 27 11 19 10 12 2 3 14 15 1 25 7 25 2 Pectinesterase (AHRD V3.3 *** A0A2G2Z8Q4_CAPAN) AT3G47400 Solyc06g034370.1 55 58 341 21 12 7 11 9 120 80 414 16 37 44 53 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A061G797_THECC) AT5G62350 Solyc06g034380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L9 (AHRD V3.3 *** A0A1U8EIU9_CAPAN) Solyc06g034390.1 711 1423 1887 1720 2333 1671 1344 2401 3012 2249 2429 4892 1359 1782 1063 Protein EXORDIUM-like 7 (AHRD V3.3 *** A0A2G2X692_CAPBA) AT5G51550 Solyc06g034395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc06g034410.3 2 2 0 0 0 0 0 2 1 1 9 2 4 6 105 DUF1442 domain-containing protein (AHRD V3.3 *** A0A1Q3BAQ3_CEPFO) AT5G62280 Solyc06g035410.2 1 0 0 0 0 0 0 0 0 0 5 0 0 0 0 Purine permease (AHRD V3.3 *-* A0A2R6QYE6_ACTCH),Pfam:PF16913 Solyc06g035420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 purine permease 3-like (AHRD V3.3 *** A0A1U8H408_CAPAN) AT1G28220 Solyc06g035430.3 218 214 381 402 255 354 300 268 205 198 222 337 244 298 165 AT-hook motif nuclear-localized protein 3 (AHRD V3.3 *** A0A1U8GWV0_CAPAN) Solyc06g035440.3 0 0 0 0 6 0 1 0 0 0 0 0 0 0 0 protein TPX2-like (AHRD V3.3 *** A0A2I4EED1_9ROSI) Solyc06g035450.4 16568 14248 15837 12792 11959 14035 11856 10627 11079 10754 12259 12476 16272 16127 15194 DEAD-box ATP-dependent RNA helicase 7 (AHRD V3.3 *** A0A2G3C5Q1_CAPCH) Solyc06g150108.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3D5A9_NOCCA) Solyc06g035490.3 16 103 61 21 39 41 33 29 126 32 36 25 40 35 55 bHLH transcription factor 042 Solyc06g035495.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc06g035520.3 32 9 1 28 0 0 0 0 4 1 0 4 8 20 34 Alpha/beta-hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LX98_ARTAN) Solyc06g035530.3 77 47 25 6 56 36 29 37 11 32 15 68 20 26 27 gibberellin 20-oxidase-2 AT4G25420 Solyc06g035540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g035550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g150109.1 142 102 123 137 11 15 18 17 155 96 224 127 158 135 143 MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) Solyc06g035560.3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 6 MADS-box protein AGL42-like isoform X1 (AHRD V3.3 *-* XP_010321999.1) Solyc06g035570.1 54 25 23 11 11 8 5 5 27 30 23 46 22 27 50 MADS-box transcription factor (AHRD V3.3 *-* Q1EMR8_PLAMJ) AT2G26320 Solyc06g035580.3 320 363 634 632 118 106 89 102 516 595 847 499 251 238 249 Glucose-methanol-choline (GMC) oxidoreductase family protein (AHRD V3.3 *** A0A1P8BHC1_ARATH) Solyc06g035600.3 123 130 150 169 167 146 174 186 129 95 84 213 154 174 150 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QK42_9MAGN) Solyc06g035610.3 35 86 70 185 155 146 130 113 86 78 120 93 84 85 170 RNA-binding protein (AHRD V3.3 *-* Q941H9_TOBAC) Solyc06g035620.3 386 176 234 161 134 110 108 121 194 314 422 172 192 161 214 Transcription factor GRAS (AHRD V3.3 *** A0A200QMI2_9MAGN) Solyc06g035625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc06g035680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 sorbitol dehydrogenase (AHRD V3.3 *** A0A2I4FGA5_9ROSI) Solyc06g035690.3 450 247 356 231 372 315 287 322 185 335 252 266 296 241 237 Per1-like (AHRD V3.3 *** A0A200PW77_9MAGN) AT1G16560 Solyc06g035700.1 50 37 412 18 0 1 0 0 2 120 428 81 24 3 94 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2WIL9_CAPBA) Solyc06g035710.1 224 172 86 169 39 23 13 21 109 251 53 65 232 150 137 Protein DETOXIFICATION (AHRD V3.3 *** A0A1Q3CGT0_CEPFO) AT4G23030 Solyc06g035720.3 644 1098 1043 1597 1532 1563 1479 1708 1267 1973 2379 1432 1388 1068 1426 BAG family molecular chaperone regulator 1 (AHRD V3.3 *** A0A1U8H5I3_CAPAN) AT5G52060 Solyc06g035723.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (AHRD V3.3 --* C80B3_PAPSO) Solyc06g035727.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic translation initiation factor 4G (AHRD V3.3 *-* A0A2G3DIY4_CAPCH) Solyc06g035760.4 11 23 39 107 12 2 1 4 8 23 11 1 35 38 268 Cytochrome P450 (AHRD V3.3 *** A0A200R0H9_9MAGN) Solyc06g035770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g035790.3 161 242 244 393 279 175 232 279 336 207 304 652 271 390 193 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1NSE2_ARTAN) Solyc06g035810.1 42 32 44 3 1 0 3 0 5 12 11 0 98 28 19 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A2U1MB89_ARTAN) Solyc06g035820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stamen-specific protein FIL1 (AHRD V3.3 *** A0A2G2Z8N6_CAPAN) AT5G52160 Solyc06g035830.1 1 3 0 0 0 1 0 0 0 0 1 0 0 0 0 Unknown protein Solyc06g035840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g035850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g035870.3 1382 1038 1558 1092 878 859 808 725 1230 1048 1315 1183 1724 1522 1720 Membrane steroid-binding protein (AHRD V3.3 *** G5DXK7_SILLA) AT3G48890 Solyc06g035875.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g035880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein ROC5 (AHRD V3.3 *-* A0A2G3CWC3_CAPCH) Solyc06g035883.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein ROC5 (AHRD V3.3 *-* A0A1U8FZU7_CAPAN) Solyc06g035887.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein ROC6 (AHRD V3.3 *-* A0A2G3AGV6_CAPAN) Solyc06g035900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Remorin (AHRD V3.3 *-* A0A1U8F3B7_CAPAN) Solyc06g035910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Remorin (AHRD V3.3 *-* A0A1U8F3B7_CAPAN) Solyc06g035920.3 669 446 498 413 321 272 273 288 337 184 418 269 336 387 938 Remorin (AHRD V3.3 *** A0A1U8F3B7_CAPAN) Solyc06g035930.1 0 0 0 3 0 1 1 1 1 0 3 0 0 0 3 Unknown protein Solyc06g035940.3 2366 4326 3201 3681 2022 1657 3070 961 3770 1792 1337 1361 6173 2752 1881 Homeobox-leucine zipper protein ROC5 (AHRD V3.3 *** A0A2G2X6G6_CAPBA) Solyc06g035960.3 81 134 77 97 42 56 75 41 88 245 147 59 256 96 94 Oxalate--CoA ligase (AHRD V3.3 *** A0A1U8FIW0_CAPAN) AT3G48990 Solyc06g035970.3 3445 4202 2524 2335 2948 2418 2445 3169 3016 2568 2178 2499 4667 3567 3194 Tubulin beta chain (AHRD V3.3 *** A0A2G3C5Z8_CAPCH) Solyc06g035980.4 1 0 0 0 0 0 0 0 0 0 3 0 0 0 0 Unknown protein Solyc06g036000.4 1120 1129 1258 1301 1036 1171 1055 1019 1065 907 922 1042 1203 1225 1183 DNA-directed RNA polymerase iii subunit rpc3-like protein (AHRD V3.3 *** A0A2K3P255_TRIPR) AT3G49000 Solyc06g036020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g036030.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 oxidoreductase/transition metal ion-binding protein (AHRD V3.3 *-* AT5G52410.3) Solyc06g036040.1 1 3 0 1 0 1 5 0 2 0 0 0 3 0 9 oxidoreductase/transition metal ion-binding protein (AHRD V3.3 *-* AT5G52410.3) Solyc06g036050.4 1026 2364 3301 2062 3597 4175 3595 3446 2308 1409 2819 1968 2920 2541 2603 60S ribosomal protein L36 (AHRD V3.3 *-* A0A2G2Z8V1_CAPAN) AT3G53740 Solyc06g036060.4 225 216 422 311 292 369 418 227 282 232 377 224 299 294 408 Zinc finger, C2H2 (AHRD V3.3 *** A0A2U1MXZ4_ARTAN) AT4G25610 Solyc06g036070.3 955 613 495 441 536 535 525 391 479 435 507 516 553 615 787 SKP1-like protein 21 (AHRD V3.3 *** A0A1U8F5L4_CAPAN) AT3G61415 Solyc06g036080.4 1765 1414 1251 1373 1213 1295 1300 1182 1304 1510 1289 1191 1310 1192 1464 MAP kinase kinase kinase 37 AT1G63700 Solyc06g036100.3 100 74 59 41 15 15 16 12 44 133 38 15 64 28 132 Transporter arsB (AHRD V3.3 *** A0A2U1Q5Y3_ARTAN) AT1G02260 Solyc06g036110.1 190 230 605 113 35 89 62 54 84 371 324 60 273 244 218 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LCI8_ARTAN) AT5G23950 Solyc06g036120.3 81 59 88 93 41 69 49 42 46 64 67 29 128 87 135 Unknown protein Solyc06g036130.4 141 343 427 224 182 164 190 173 733 450 544 313 189 173 187 Protein DETOXIFICATION (AHRD V3.3 *** Q6V7U8_SOLLC) AT4G25640 Solyc06g036170.1 2543 1143 876 697 538 611 486 661 789 1454 1334 1058 803 762 1256 gras9 AT5G52510 Solyc06g036180.3 10 80 125 170 347 349 335 311 141 72 170 166 25 88 77 Unknown protein Solyc06g036190.1 13 2 9 20 14 9 12 5 9 12 18 3 12 22 11 Protein kinase-like protein (AHRD V3.3 *-* Q8LCP0_ARATH) Solyc06g036200.2 3 15 5 4 1 6 0 2 3 3 14 6 9 11 4 Transcription initiation factor TFIID subunit 13 (AHRD V3.3 *** A0A2G3D630_CAPCH) Solyc06g036210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic (AHRD V3.3 *-* I6N960_DATST) Solyc06g036213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ferric reduction oxidase 4 (AHRD V3.3 *-* A0A2G2ZBA8_CAPAN) Solyc06g036217.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ferric reduction oxidase 4 (AHRD V3.3 *** A0A2G2ZBA8_CAPAN) Solyc06g036230.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein (AHRD V3.3 *-* A0A2P5EZ11_TREOI) Solyc06g036240.2 0 0 2 0 0 0 2 1 0 0 0 0 0 1 0 Pleiotropic drug resistance protein (AHRD V3.3 *-* C8CA13_CUCSA) Solyc06g036250.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 stress response NST1-like protein (AHRD V3.3 *** AT4G25690.2) AT4G25690 Solyc06g036255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc06g036260.3 996 1190 286 794 2194 2189 2080 2554 525 1195 179 693 661 387 139 beta-carotene hydroxylase-1 AT4G25700 Solyc06g036290.3 345 184 540 147 140 136 152 126 162 48 100 98 290 219 81 heat shock protein 90 AT5G52640 Solyc06g036300.4 1563 941 1062 1143 861 916 987 892 684 1104 971 903 1050 1212 1143 Homeodomain-like superfamily protein (AHRD V3.3 *** A0A2U1MBK2_ARTAN) AT5G52660 Solyc06g036310.3 1251 1066 3242 1197 444 481 397 338 562 1315 4195 404 2503 1122 1408 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6RSL8_ACTCH) AT5G52740 Solyc06g036330.1 1102 751 968 1890 517 491 665 655 554 2219 1016 680 1874 1195 1402 Ornithine cyclodeaminase (AHRD V3.3 *** A0A2K3N0F5_TRIPR) AT5G52810 Solyc06g036340.4 191 234 214 282 239 246 311 246 322 260 282 266 240 250 224 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *-* A0A2U1LU47_ARTAN) Solyc06g036350.3 464 595 613 565 729 766 668 770 623 477 444 583 624 655 645 NADH-ubiquinone oxidoreductase-related protein (AHRD V3.3 *** A0A2U1N0L6_ARTAN) AT5G52840 Solyc06g036410.1 36 23 24 17 0 0 2 6 9 13 4 0 35 21 15 Protein SGT1-like protein (AHRD V3.3 *-* A0A2G2Z994_CAPAN) Solyc06g036420.3 91 37 119 32 10 26 19 5 16 47 68 20 120 83 42 Protein SGT1-like protein (AHRD V3.3 *** A0A2G3C6V0_CAPCH) Solyc06g036430.3 97 271 410 330 282 296 278 290 361 223 376 303 295 330 506 Reticulon-like protein (AHRD V3.3 *** A0A2G3CWR7_CAPCH) Solyc06g036440.2 1 0 0 0 0 0 0 0 2 1 11 0 4 0 0 S-type anion channel SLAH3 (AHRD V3.3 *** A0A2G3CWS5_CAPCH) AT5G24030 Solyc06g036450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc06g036460.4 0 12 1 8 2 1 4 4 5 3 2 14 8 14 0 membrane-associated kinase regulator (AHRD V3.3 *-* AT5G52900.1) Solyc06g036470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2Z943_CAPAN) AT5G24080 Solyc06g036480.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter C family member 10 (AHRD V3.3 *-* A0A2G3CWT9_CAPCH) Solyc06g036490.3 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 ABC transporter C family member 10 (AHRD V3.3 *** A0A2G2ZZN1_CAPAN) Solyc06g036500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin-associated/translation elongation factor EF1B protein (AHRD V3.3 *-* AT5G53330.1) Solyc06g036520.1 781 841 778 708 754 734 680 705 664 812 774 643 937 881 961 transmembrane protein (AHRD V3.3 *-* AT1G80200.1) Solyc06g036540.1 207 223 326 299 242 264 283 236 187 226 353 203 348 204 391 tail fiber (AHRD V3.3 *-* AT5G11280.1) Solyc06g036550.1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 Unknown protein Solyc06g036555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectate lyase (AHRD V3.3 *-* A0A2G2VBB9_CAPBA) Solyc06g036570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 centrosomal protein of 135 kDa-like protein (AHRD V3.3 *-* AT2G37370.3) Solyc06g036580.4 1281 1933 1396 1446 1970 2008 1859 2096 1961 1358 1323 1795 1734 1974 1238 U4/U6 small nuclear ribonucleoprotein Prp3 (AHRD V3.3 *** A0A1J3DZH5_NOCCA) AT1G28060 Solyc06g036590.1 69 168 125 81 171 127 133 166 200 97 91 137 137 154 82 protein RDM16-like isoform X1 (AHRD V3.3 *-* XP_010321975.1) Solyc06g036600.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flowering time control protein FPA (AHRD V3.3 *-* A0A2I0VHS8_9ASPA) Solyc06g036620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat (AHRD V3.3 *** A0A200PVW6_9MAGN) Solyc06g036630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat (AHRD V3.3 *-* A0A200PVW6_9MAGN) Solyc06g036640.4 603 428 516 434 288 401 387 328 449 365 474 339 700 556 619 alpha-(1%2C6)-fucosyltransferase (AHRD V3.3 *** AT5G28910.2) AT5G28910 Solyc06g036660.1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 Unknown protein Solyc06g036670.2 3 17 9 19 17 7 17 10 0 5 3 6 10 18 4 SET domain-containing protein (AHRD V3.3 *-* AT3G55080.5) Solyc06g036690.2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 Unknown protein Solyc06g036700.3 12 9 3 6 5 8 10 15 5 7 1 12 7 12 9 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic (AHRD V3.3 *-* A0A1J3FS42_NOCCA) Solyc06g036720.4 2171 1469 1111 1096 1027 939 1121 1121 1219 1429 1246 1188 1248 1355 1358 Ubiquitin domain (AHRD V3.3 *** A0A200PPY8_9MAGN) AT5G25270 Solyc06g036725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zf-RVT domain-containing protein (AHRD V3.3 *-* A0A1Q3DJQ9_CEPFO) Solyc06g036770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g036780.3 133 179 165 166 182 243 204 217 175 169 157 228 201 155 145 magnesium transporter%2C putative (DUF803) (AHRD V3.3 *** AT5G11960.1) AT5G11960 Solyc06g036800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g036805.1 9 11 5 1 1 1 3 5 4 0 0 6 3 1 1 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3KEW3_9ROSI) AT1G40087 Solyc06g043350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g043340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g043280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g043270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SKP1-like protein (AHRD V3.3 *** Q84UV6_NICBE) Solyc06g043260.2 0 0 0 4 12 8 4 1 2 0 0 0 0 0 0 Unknown protein Solyc06g043250.4 3 3 7 0 7 6 7 4 2 2 0 0 6 0 0 Protein kinase family protein (AHRD V3.3 *** A0A1P8BD07_ARATH) AT5G12000 Solyc06g043210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase UPL5 (AHRD V3.3 *-* A0A2G2WUZ6_CAPBA) Solyc06g043170.4 628 778 722 749 760 782 912 717 599 489 773 562 732 793 859 Actin-related protein 5 (AHRD V3.3 *** A0A2G3C5G2_CAPCH) AT3G12380 Solyc06g043160.1 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 Pre-mRNA-processing-splicing factor 8 (AHRD V3.3 *-* A0A2G2Z1B3_CAPAN) Solyc06g043150.4 97 973 1087 1498 2657 2458 2677 2981 1048 781 840 1723 112 585 381 WD40 repeat (AHRD V3.3 *** A0A200R530_9MAGN) Solyc06g043153.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g043157.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc06g043140.4 22 4 3 3 2 4 12 5 5 10 7 7 8 5 4 Autophagy protein 5 (AHRD V3.3 *** A0A2G2XBD3_CAPBA) AT5G17290 Solyc06g043145.1 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc06g043120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chalcone synthase (AHRD V3.3 *-* Q6X0M8_SOYBN) Solyc06g043110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *-* A0A068TVL6_COFCA) Solyc06g150110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc06g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** M1AGF1_SOLTU) Solyc06g043070.4 225 216 179 172 101 163 148 125 92 107 182 106 296 227 227 hypothetical protein (AHRD V3.3 *** AT3G04020.1) AT3G04020 Solyc06g043060.1 30 55 20 15 22 4 11 19 15 25 4 22 50 37 21 hypothetical protein (AHRD V3.3 *-* AT3G04020.1) Solyc06g043065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc06g043030.4 813 813 638 832 947 901 1020 1170 1006 921 730 860 691 868 859 AP-3 complex subunit beta (AHRD V3.3 *** A0A2G2Z8U8_CAPAN) AT3G55480 Solyc06g043035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta, chloroplastic (AHRD V3.3 *-* A0A2U1KL25_ARTAN) Solyc06g043010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g042990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATPase subunit 4 (AHRD V3.3 *-* A0A0C5B288_HYONI) Solyc06g042980.3 74 66 28 56 134 82 101 175 81 129 37 43 46 73 7 hypothetical protein (AHRD V3.3 *-* AT3G12590.1) Solyc06g042960.3 209 263 116 153 197 193 200 308 230 216 127 197 124 214 109 hypothetical protein (AHRD V3.3 *-* AT3G12590.2) Solyc06g042950.3 450 432 508 449 538 672 638 499 571 434 434 428 440 561 530 hypothetical protein (AHRD V3.3 *** AT3G12590.1) AT3G12590 Solyc06g042955.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL17 (AHRD V3.3 --* A0A2G2WD83_CAPBA) Solyc06g042940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g042945.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box protein defh21-like (AHRD V3.3 *** XP_010322056.1) Solyc06g048370.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g150112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0WVG5_9ASPA) Solyc06g150113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g048380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* Q33DU5_MUSAR) Solyc06g048390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g048400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (DUF784) (AHRD V3.3 *** A8MQ82_ARATH) AT3G30385 Solyc06g048410.4 1139 1902 2286 2238 4816 2725 2719 3797 1506 2083 2818 935 1609 1478 3134 iron superoxide dismutase Solyc06g048420.2 0 0 0 0 6 3 3 3 0 0 0 0 2 0 0 Superoxide dismutase (AHRD V3.3 *** A0A1U8H5G9_CAPAN) Solyc06g048430.4 33 22 29 66 70 65 65 31 33 33 59 54 35 41 47 ATP synthase subunit delta', mitochondrial (AHRD V3.3 *-* A0A2G3C5X9_CAPCH) Solyc06g048440.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A1W5HN85_9ORYZ) Solyc06g048460.2 1156 844 529 691 857 759 816 968 714 645 423 787 520 783 340 anaphase-promoting complex subunit 1 (AHRD V3.3 *** A0A2I4ER07_9ROSI) AT5G05560 Solyc06g048470.4 483 1097 1221 1286 1561 1889 1774 1738 1882 1312 1582 1650 950 1355 1242 COP1-Interacting protein-related (AHRD V3.3 *** A0A2R4QNN9_9POAL) Solyc06g048480.3 1865 1447 1231 1217 1121 1133 1216 1118 1123 1312 990 1147 1128 1265 1096 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PRC0_ARTAN) AT3G54190 Solyc06g048510.4 1206 722 667 602 512 571 630 633 693 899 598 660 774 663 622 WD-40 repeat containing protein (AHRD V3.3 *** A0A0K0XR03_TOBAC) AT3G56440 Solyc06g048520.3 1096 589 603 684 354 415 389 407 530 793 548 561 692 633 555 RING/U-box superfamily protein (AHRD V3.3 *** Q8L610_ARATH) Solyc06g048530.4 2 0 6 6 1 3 1 0 6 2 1 5 3 1 0 Hydroxyacylglutathione hydrolase, putative, expressed (AHRD V3.3 *** Q10LW8_ORYSJ) AT3G10850 Solyc06g048540.3 510 679 672 686 735 675 729 673 663 566 725 643 672 711 556 Fe-S cluster assembly ATP-binding protein (AHRD V3.3 *** A0A2T0UUS9_9GAMM) AT3G10670 Solyc06g048560.2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A061H0G0_THECC) Solyc06g048570.3 169 203 138 86 84 132 93 88 102 98 151 81 63 93 72 Methyl esterase 17 (AHRD V3.3 *** A0A2U1M7F1_ARTAN) AT3G10870 Solyc06g048575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) ATMG00240 Solyc06g048590.3 115 250 409 301 312 383 340 298 355 277 314 355 340 361 334 Transmembrane receptor (AHRD V3.3 *** A0A200Q182_9MAGN) AT1G61670 Solyc06g048600.3 5 33 57 45 40 43 35 55 51 35 43 35 29 42 42 Response regulator 7 AT3G56380 Solyc06g048610.3 527 966 654 800 894 878 904 923 718 518 573 764 1186 1000 751 tRNA-binding domain (AHRD V3.3 *** A0A200Q6E8_9MAGN) AT2G40660 Solyc06g048620.3 487 1010 1121 1196 1641 1560 1355 1669 1107 898 751 1588 691 972 696 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *** A0A072V1G8_MEDTR) AT3G56370 Solyc06g048630.3 361 806 847 884 1119 1258 1270 1342 1033 817 887 1032 711 809 604 methionine sulfoxide reductase A1 AT2G40620 Solyc06g048660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g048670.4 0 2 0 0 14 16 5 3 1 0 0 1 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6PZI7_ACTCH) AT1G75900 Solyc06g048680.3 0 0 0 0 0 0 3 1 0 0 1 7 0 0 0 Protein zinc induced facilitator-like 1-like (AHRD V3.3 *-* A0A2K3MT72_TRIPR) Solyc06g048683.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) Solyc06g150114.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc06g048700.1 20 11 23 0 0 0 0 0 0 3 28 0 2 11 0 Unknown protein Solyc06g048705.1 0 0 0 4 0 0 0 0 0 0 0 0 0 2 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3MQI8_TRIPR) Solyc06g048710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1NZC8_ARTAN) AT2G46370 Solyc06g048713.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc06g150115.1 53 13 0 3 0 0 0 0 1 15 0 2 0 8 24 Unknown protein Solyc06g048720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NHL domain-containing protein (AHRD V3.3 *-* A0A1Q3BMU0_CEPFO) Solyc06g048730.3 555 1173 806 841 1587 1381 1483 1377 1044 703 899 897 847 1025 943 Uroporphyrinogen decarboxylase (AHRD V3.3 *** A0A2G3CAB7_CAPCH) AT2G40490 Solyc06g048735.1 74 16 33 4 3 3 16 5 0 12 2 10 12 64 12 receptor-like protein kinase (AHRD V3.3 *** A0A1U7WU94_NICSY) Solyc06g048740.3 132 16 9 9 1 2 10 2 1 5 6 1 50 54 29 Lrr receptor-like serinethreonine-protein kinase fls2 (AHRD V3.3 *** A0A314LAY5_NICAT) Solyc06g048750.3 21 12 48 77 18 33 13 18 14 27 50 11 13 31 172 Unknown protein Solyc06g048770.3 0 2 2 0 0 3 1 0 6 1 2 1 1 1 6 Unknown protein Solyc06g048780.1 0 0 0 1 1 1 1 0 1 1 0 0 0 0 16 Protein PLANT CADMIUM RESISTANCE like (AHRD V3.3 *** A0A2R6RR66_ACTCH) Solyc06g048790.1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 Protein PLANT CADMIUM RESISTANCE like (AHRD V3.3 *** A0A2R6RR66_ACTCH) AT3G10980 Solyc06g048810.4 700 565 657 583 489 695 508 515 480 545 606 370 705 636 545 Protein PLANT CADMIUM RESISTANCE like (AHRD V3.3 *** A0A2R6RR66_ACTCH) Solyc06g048813.1 1 0 0 0 5 1 0 0 0 1 0 0 0 0 0 Unknown protein Solyc06g048817.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc06g048820.1 970 658 610 365 271 294 291 310 350 859 607 243 329 378 492 Wound-induced protein 1 (AHRD V3.3 *** A0A2G3C5E3_CAPCH) AT3G10985 Solyc06g048825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc06g048840.3 28 5 7 23 8 1 2 3 10 12 22 0 6 5 1 Late embryogenesis abundant protein (AHRD V3.3 *** H2E688_HORVU) AT2G40170 Solyc06g048850.3 18 111 72 127 282 275 270 269 96 58 90 166 8 48 96 hypothetical protein (AHRD V3.3 *** AT4G08330.1) Solyc06g048860.3 0 0 0 2 0 0 0 0 0 0 0 1 1 4 0 Laccase (AHRD V3.3 *** K4C5D2_SOLLC) AT5G05390 Solyc06g048870.3 1 2 0 1 0 2 0 1 0 0 0 0 1 5 1 WRKY transcription factor 19 Solyc06g048890.4 1026 667 801 634 614 715 724 621 655 640 895 622 714 816 913 Protein kinase family protein with ARM repeat domain-containing protein (AHRD V3.3 *** A0A2U1MUW0_ARTAN) AT2G40730 Solyc06g048900.1 53 86 44 83 38 50 35 44 66 42 75 53 135 106 89 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2Y9A8_CAPAN) AT2G40720 Solyc06g048905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3J4H1_9ROSI) Solyc06g048910.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A1J3IKQ5_NOCCA) AT4G27190 Solyc06g048920.4 332 418 568 361 390 446 490 440 318 396 372 335 364 441 383 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (AHRD V3.3 *** I0F5R8_9BACI) AT2G40690 Solyc06g048930.4 2 15 13 30 56 51 31 32 55 35 12 13 39 41 13 Tomato Response regulator 16,17 AT3G56380 Solyc06g048940.4 650 538 362 413 393 414 400 491 389 646 249 370 525 438 352 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A1U8GL93_CAPAN) Solyc06g048943.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc06g048947.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) Solyc06g048950.3 858 1737 2040 2152 2897 3363 3158 3579 2069 1612 2203 2785 1382 1934 1799 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *** A0A072V1G8_MEDTR) Solyc06g048960.4 609 607 822 795 963 987 1091 1025 813 556 612 844 502 729 640 Dicer-like 2a AT3G03300 Solyc06g048970.3 1023 1007 847 946 1220 1114 978 1316 982 1007 799 1231 629 878 777 Cation-transporting ATPase (AHRD V3.3 *** A0A1P8BEB0_ARATH) AT5G05240 Solyc06g048990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2H4NUF5_9ERIC) Solyc06g049010.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** S4T6I7_CAPAN) Solyc06g049020.1 777 427 771 112 69 89 59 72 122 173 742 318 291 233 402 hypothetical protein (AHRD V3.3 *** AT3G56360.1) AT5G05250 Solyc06g049030.4 109 129 62 147 70 55 49 39 82 56 85 63 85 158 369 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QK74_ARTAN) AT3G10910 Solyc06g049033.1 2 0 0 0 0 0 0 0 0 0 0 4 0 3 9 Unknown protein Solyc06g049037.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc06g049040.4 239 391 255 382 816 763 803 682 349 285 279 275 218 268 365 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** A0A2U1LV89_ARTAN) AT2G40620 Solyc06g049050.3 170 3228 299 977 4489 4625 3499 4555 1833 1726 315 1234 885 1154 432 expansin 2 AT2G40610 Solyc06g049060.3 326 226 333 349 280 329 375 232 250 379 285 246 280 292 341 Reticulon-like protein (AHRD V3.3 *** A0A1U8E360_CAPAN) AT3G10915 Solyc06g049070.3 856 1501 1617 1661 1561 1543 1513 1411 1268 1161 1489 1163 1626 1576 1505 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2K3PIW2_TRIPR) Solyc06g049080.3 1969 2560 1764 1841 2605 2217 2071 3022 2841 2749 1762 2773 2935 2690 1848 thioredoxin peroxidase 1 AT3G10920 Solyc06g049090.3 71 87 97 55 53 87 127 89 74 62 72 66 69 91 72 tRNA (guanine(26)-N(2))-dimethyltransferase (AHRD V3.3 *** A0A2I4ER74_9ROSI) Solyc06g050110.2 0 2 0 0 0 5 0 1 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A1P8B5N0_ARATH) AT4G25420 Solyc06g050120.3 5023 9704 9835 7940 10780 11000 10274 9974 6762 5797 8423 8363 10670 9779 8618 60S ribosomal protein L7a (AHRD V3.3 *** A0A2G3DGL0_CAPCH) AT3G62870 Solyc06g050130.3 890 388 515 564 484 460 391 505 674 880 648 859 430 597 989 Alpha-galactosidase (AHRD V3.3 *** K4C5G0_SOLLC) AT3G56310 Solyc06g050135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc06g050140.1 11 3 0 7 0 0 0 0 0 1 1 0 0 2 0 Unknown protein Solyc06g050160.4 1 7 2 6 2 5 3 9 4 5 10 4 1 0 0 Homeobox-leucine zipper protein HDG1 (AHRD V3.3 *** A0A2I0VKD9_9ASPA) Solyc06g050170.4 4360 3266 3650 3639 4336 4363 4020 3724 3569 3848 3860 4058 2891 3570 5044 Potassium transporter (AHRD V3.3 *** A0A1Q3B385_CEPFO) AT2G40540 Solyc06g050180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mini-chromosome maintenance complex-binding protein (AHRD V3.3 *** A0A2G3C5K2_CAPCH) Solyc06g050200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mini-chromosome maintenance complex-binding protein (AHRD V3.3 *-* A0A2G3C5K2_CAPCH) Solyc06g050210.3 335 368 292 373 384 419 433 385 289 333 266 329 380 338 286 ADP,ATP carrier protein (AHRD V3.3 *** A0A1U8GW66_CAPAN) AT5G05310 Solyc06g050220.4 145 92 67 82 98 76 80 76 104 103 151 78 79 81 93 Alpha-soluble NSF attachment protein (AHRD V3.3 *-* A0A1U8GWI2_CAPAN) Solyc06g050225.1 166 120 143 147 100 95 101 93 105 108 127 109 58 118 163 Unknown protein Solyc06g050230.4 513 328 241 320 356 274 227 333 417 361 264 268 244 292 276 Phosphoglucan phosphatase LSF2, chloroplastic (AHRD V3.3 *** A0A2G2WIB1_CAPBA) AT3G10940 Solyc06g050240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050250.1 151 153 69 78 163 222 196 191 167 102 61 179 86 81 63 Adenine/guanine permease AZG1 (AHRD V3.3 *** A0A2G2WI90_CAPBA) AT3G10960 Solyc06g050260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050270.1 0 1 0 0 16 17 15 11 0 0 13 1 3 0 0 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2ZJA2_CAPAN) Solyc06g050280.1 0 0 2 1 43 34 40 61 0 3 0 5 14 0 0 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2ZJA2_CAPAN) Solyc06g050290.1 6 1 22 19 33 64 42 50 6 20 5 5 31 10 3 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2ZJA2_CAPAN) Solyc06g050293.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3EXQ7_NOCCA) Solyc06g050297.1 13 16 42 44 23 42 38 14 9 7 58 2 15 21 59 Unknown protein Solyc06g050300.3 498 418 686 648 501 679 627 604 535 441 682 555 504 621 763 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2ZJA2_CAPAN) Solyc06g050303.1 36 32 37 23 44 31 21 30 39 28 17 42 37 23 25 Unknown protein Solyc06g050307.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LVA2_TRIPR) Solyc06g050310.3 1545 654 611 634 571 585 624 621 614 1012 794 694 523 719 643 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** F4J510_ARATH) AT3G10970 Solyc06g050330.1 1 0 3 7 4 7 3 4 2 4 0 6 0 2 2 Unknown protein Solyc06g050340.3 33 117 76 29 49 68 46 59 77 81 24 77 65 54 100 high mobility group B protein 7 isoform X1 (AHRD V3.3 *-* XP_025887246.1) Solyc06g050350.3 699 1335 2260 1310 1414 1392 1301 1343 1526 1051 2236 1263 1524 1083 1950 WEB family (AHRD V3.3 *** A0A2U1NVR7_ARTAN) Solyc06g050360.3 46 35 50 52 23 14 22 30 28 49 49 29 58 47 62 Unknown protein Solyc06g050370.1 455 447 514 1014 421 417 448 410 383 548 438 462 456 445 444 Alkylated DNA repair protein (AHRD V3.3 *-* A0A2I0W164_9ASPA) AT2G40475 Solyc06g050375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Peroxisome biogenesis protein 2 (AHRD V3.3 *-* A0A2G2X6N8_CAPBA) Solyc06g050400.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Lysine--tRNA ligase (AHRD V3.3 *-* A0A2G3CAI2_CAPCH) Solyc06g050430.3 9 12 72 75 25 52 43 18 15 40 197 21 1 13 61 LOB domain-containing protein 15 (AHRD V3.3 *** A0A2G3C6C8_CAPCH) AT2G40470 Solyc06g050440.3 18 20 8 33 14 7 26 9 95 10 71 6 53 34 85 Peroxidase (AHRD V3.3 *** K4C5I8_SOLLC) AT5G05340 Solyc06g050450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050500.2 871 297 389 250 187 161 156 163 392 520 806 217 201 224 364 abscisic acid receptor PYL4-like (AHRD V3.3 *** A0A2I4EQL0_9ROSI) AT2G38310 Solyc06g050510.3 2962 3307 4302 3664 4612 5037 5377 4684 4245 3151 3597 4142 3036 3869 4436 SNF2 domain-containing protein CLASSY 1 (AHRD V3.3 *** A0A1U8GWM4_CAPAN) AT3G42670 Solyc06g050520.3 67 27 4 18 29 14 7 6 22 34 37 37 17 18 56 dehydration responsive element binding protein 1 AT5G05410 Solyc06g050530.3 3 0 7 5 1 0 0 0 4 2 1 4 23 8 4 Laccase (AHRD V3.3 *** K4C5J7_SOLLC) AT5G05390 Solyc06g050540.1 0 3 4 0 0 0 0 0 0 1 10 0 0 0 0 Unknown protein Solyc06g050550.4 1764 2132 1397 1643 2038 1683 1534 2663 1888 3105 1786 2446 1730 1722 1413 Sorting nexin 2A (AHRD V3.3 *** A0A2G3C5I7_CAPCH) Solyc06g050560.3 74 598 493 892 1492 1613 1542 1940 538 280 480 889 97 400 289 Receptor-like kinase (AHRD V3.3 *** C4TP22_SOYBN) AT3G51740 Solyc06g050565.1 12 3 8 33 10 17 25 13 8 8 5 17 3 12 0 Unknown protein Solyc06g050570.3 1207 2724 2685 3692 4489 3338 3239 4261 2170 2547 2458 2924 2736 2333 1492 PRA1 family protein (AHRD V3.3 *** A0A1U8GKG2_CAPAN) AT5G05380 Solyc06g050590.3 858 2768 1953 2179 3847 3127 3217 4162 2449 1895 1916 2467 2774 2525 1350 Biotin/lipoyl attachment (AHRD V3.3 *** A0A200QBF2_9MAGN) AT3G56130 Solyc06g050600.4 43 17 35 31 37 52 53 20 33 21 64 25 29 31 10 Kelch_1 domain-containing protein/Dev_Cell_Death domain-containing protein (AHRD V3.3 *-* A0A1Q3B339_CEPFO) Solyc06g050610.3 22 7 29 9 55 18 26 10 28 33 48 29 21 21 20 DCD (Development and Cell Death) domain protein (AHRD V3.3 *-* F4J517_ARATH) AT3G11000 Solyc06g050620.3 802 857 578 638 992 1010 931 1002 736 846 828 660 498 553 651 DUF399 family protein, putative (DUF399 and DUF3411) (AHRD V3.3 *** A0A1P8B2W9_ARATH) AT3G56140 Solyc06g050630.3 65 55 122 54 87 40 36 39 62 102 143 60 30 50 58 Arogenate dehydrogenase 1, chloroplastic (AHRD V3.3 *** A0A2G3C5J6_CAPCH) Solyc06g050640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nascent polypeptide-associated complex subunit beta (AHRD V3.3 *-* A0A2G3DD77_CAPCH) Solyc06g150116.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein MAIN-LIKE 2-like (AHRD V3.3 *-* XP_025887776.1) Solyc06g050690.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 Cation H(+) antiporter 15-like protein (AHRD V3.3 *** A0A2K3MRR1_TRIPR) Solyc06g050710.4 65 69 141 117 104 95 66 54 50 78 80 39 79 66 173 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *** A0A2U1LN48_ARTAN) AT5G05365 Solyc06g050720.3 1193 988 1258 860 908 796 703 718 1013 1183 1184 928 1133 937 1069 staphylococcal-like nuclease CAN2 (AHRD V3.3 *** A0A2I4EQZ2_9ROSI) AT2G40410 Solyc06g050730.4 310 402 415 269 378 355 379 426 321 310 261 318 433 330 234 Sel1 repeat protein (AHRD V3.3 *-* F4ISY9_ARATH) AT5G05360 Solyc06g050740.1 8 2 3 2 0 1 3 0 1 1 8 1 3 0 1 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) Solyc06g050760.1 163 146 261 192 73 112 93 87 163 297 126 135 94 148 143 Wound-induced protein 1 (AHRD V3.3 *** A0A2G2Z8C8_CAPAN) AT3G10985 Solyc06g050770.3 1193 1824 1582 1457 1759 1695 1762 1799 1992 1309 1406 1479 1940 1764 1726 Alpha-soluble NSF attachment protein (AHRD V3.3 *** A0A2G2WJF0_CAPBA),Pfam:PF14938 AT3G56190 Solyc06g050780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050790.3 94 90 75 70 46 57 48 60 47 104 54 58 34 84 116 Amino acid transporter (AHRD V3.3 *** S8CJS6_9LAMI) Solyc06g050800.4 802 257 286 323 59 56 50 70 588 649 369 173 372 487 1316 Amino acid transporter (AHRD V3.3 *** S8C1J4_9LAMI) AT3G56200 Solyc06g050810.3 228 71 314 97 8 22 17 16 84 124 252 59 56 92 97 LURP-one-like protein (DUF567) (AHRD V3.3 *** A0A1I9LQL5_ARATH) AT3G56180 Solyc06g050820.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosome biogenesis protein NOP53 (AHRD V3.3 *-* A0A200QRU3_9MAGN) Solyc06g050825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ribosome biogenesis protein NOP53 (AHRD V3.3 --* XP_025885073.1) Solyc06g050830.2 34 40 58 59 19 32 20 23 37 53 42 31 5 33 54 Unknown protein Solyc06g150117.1 0 1 1 4 13 7 16 9 5 0 0 2 0 3 0 Unknown protein Solyc06g050837.1 203 103 104 186 77 94 82 105 163 147 241 101 73 84 221 ARM repeat superfamily protein (AHRD V3.3 *-* A0A2U1PUY4_ARTAN) Solyc06g050840.3 45 674 322 415 1340 1128 1290 1273 758 239 377 543 199 391 150 bHLH transcription factor135 AT2G40435 Solyc06g050850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050860.3 1 1 0 2 1 1 0 4 2 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2U1QE56_ARTAN) AT3G56230 Solyc06g050870.3 0 0 0 0 0 3 0 2 0 0 0 0 0 0 0 Hypoxia-responsive family protein (AHRD V3.3 *** B6THW4_MAIZE) Solyc06g050880.3 1039 515 345 558 525 415 382 528 543 733 533 581 579 580 555 serine-rich adhesin for platelets-like isoform X1 (AHRD V3.3 --* XP_021625239.1) Solyc06g050890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g050900.3 23 158 126 50 213 249 254 249 384 109 130 229 78 50 10 Protein NRT1/ PTR FAMILY 5.1 (AHRD V3.3 *** A0A1U8H5B7_CAPAN) AT2G40460 Solyc06g050910.1 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc06g050920.4 6 45 42 34 49 25 41 12 14 23 8 13 12 15 62 Protein trichome birefringence-like 32 (AHRD V3.3 *** A0A2G3C6N9_CAPCH) AT2G40320 Solyc06g050925.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc06g050930.3 1137 1063 952 712 567 523 471 508 590 1290 665 469 1973 1274 612 Cytosolic endo-beta-N-acetylglucosaminidase-like protein (AHRD V3.3 *** A0A2K3NXL7_TRIPR) AT5G05460 Solyc06g050950.3 3 3 29 6 0 2 6 4 2 3 19 2 9 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1NCC4_ARTAN) Solyc06g050980.3 6411 8665 5980 6901 6599 5481 5075 6325 7371 5752 6494 7810 10291 9231 10318 Ferritin (AHRD V3.3 *** A0A2G2WIC5_CAPBA) AT3G11050 Solyc06g050990.3 442 405 535 473 401 403 411 336 456 317 374 453 563 576 499 Histidine phosphatase superfamily (AHRD V3.3 *** A0A200PLT5_9MAGN) AT1G09870 Solyc06g051000.2 0 0 0 1 0 0 0 0 0 2 0 0 0 0 1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A1I9LPV2_ARATH) AT3G56080 Solyc06g051010.1 581 733 1012 590 597 614 462 719 807 789 1111 926 1025 814 476 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (AHRD V3.3 *** A0A200PX65_9MAGN) AT5G05480 Solyc06g051020.2 504 193 251 251 83 109 120 115 267 298 347 229 270 316 506 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (AHRD V3.3 *** A0A200PX65_9MAGN) Solyc06g051030.3 992 596 981 629 394 387 350 321 553 698 786 545 737 634 622 Inactive receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2WI14_CAPBA) Solyc06g051040.4 26 167 144 150 210 191 204 252 121 89 71 209 60 88 70 Mitotic checkpoint serine/threonine-protein kinase BUB1-like protein (AHRD V3.3 *-* A0A2K3L1J0_TRIPR) AT5G05510 Solyc06g051060.4 0 0 0 4 0 0 0 0 0 2 0 0 0 0 1 Homeodomain-like protein (AHRD V3.3 *-* A0A2U1NZT9_ARTAN) AT2G40260 Solyc06g051070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g051080.4 956 840 736 925 670 746 871 703 715 676 572 681 665 913 728 UDP-glucose pyrophosphorylase 3 (AHRD V3.3 *** A0A2U1NZL4_ARTAN) AT3G56040 Solyc06g051090.3 0 0 0 0 0 5 0 0 1 0 0 0 0 0 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2I4DGU6_9ROSI) Solyc06g051100.1 3 0 0 6 18 3 8 13 1 0 2 2 0 1 3 Unknown protein Solyc06g051120.4 898 573 577 591 469 536 426 537 554 908 535 528 604 556 569 trihelix transcription factor ASIL2-like (AHRD V3.3 *** A0A2I4DGU9_9ROSI) AT5G05550 Solyc06g051130.1 121 424 279 424 624 649 668 657 556 321 191 227 325 436 321 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** Q9XEF2_ARATH) AT2G40230 Solyc06g051140.4 1 0 0 0 0 0 0 0 0 3 15 0 0 1 0 ubiquitin-conjugating enzyme 23 (AHRD V3.3 *-* AT2G16920.2) Solyc06g051150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2U1NNB9_ARTAN) Solyc06g051160.4 172 214 278 298 279 369 381 206 205 188 221 220 296 337 428 DnaJ/Hsp40 cysteine-rich domain superfamily protein (AHRD V3.3 *-* A0A1I9LR22_ARATH) AT3G17668 Solyc06g051190.3 213 303 475 364 406 450 375 432 389 493 359 432 458 352 330 RNA-dependent RNA polymerase (AHRD V3.3 *** A0A328DJK0_9ASTE) AT2G19910 Solyc06g051200.3 640 1634 1625 2890 2421 1940 2752 3282 1375 2365 1394 1753 1208 1748 1029 50S ribosomal protein L3 (AHRD V3.3 *** A0A2G2YWM5_CAPAN) AT2G43030 Solyc06g051210.3 1987 2292 2982 2716 2555 2974 2851 2339 2456 2191 3100 2411 2465 2671 2767 Bromodomain-containing protein (AHRD V3.3 *-* A0A2U1N3G4_ARTAN) AT1G20670 Solyc06g051220.1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT2G31930.1) AT2G31930 Solyc06g051230.4 226 158 156 140 133 102 158 170 123 171 185 138 165 149 138 E3 ubiquitin-protein ligase RMA1H1 (AHRD V3.3 *-* A0A1J3II68_NOCCA) AT2G44410 Solyc06g051240.1 43 10 90 15 56 37 36 29 25 37 45 43 6 40 9 Unknown protein Solyc06g051250.1 41 72 55 116 60 74 94 69 85 103 59 82 88 51 28 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1Q188_ARTAN) AT3G11110 Solyc06g051260.4 1389 1625 1860 2845 2454 2139 2384 1628 1296 1721 1737 1011 2664 1329 1981 bHLH transcription factor 043 AT2G40200 Solyc06g051270.3 1626 884 710 776 625 546 524 593 890 1774 783 680 1104 604 696 Glucose-1-phosphate adenylyltransferase family protein (AHRD V3.3 *** A0A2U1PR08_ARTAN) AT2G39770 Solyc06g051300.3 7 199 154 146 242 241 242 240 112 79 113 170 101 202 21 Chromosome transmission fidelity-like protein (AHRD V3.3 *** F4KEU4_ARATH) AT5G52220 Solyc06g051310.3 1831 3502 2621 2953 3773 3617 4155 3934 3481 2601 2677 2672 2923 3178 2424 Clathrin heavy chain (AHRD V3.3 *** A0A1U8F1S0_CAPAN) AT3G11130 Solyc06g051320.3 122 836 826 1135 1271 1611 1174 1385 764 438 604 1159 553 863 253 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1NYH9_ARTAN) Solyc06g051330.1 37 30 10 17 16 19 24 5 11 9 28 1 16 29 9 Unknown protein Solyc06g051335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g051350.4 67 80 103 88 76 56 63 64 54 66 94 42 75 34 111 Protein trichome birefringence-like 28 (AHRD V3.3 *** A0A1J3CSC5_NOCCA) AT3G55990 Solyc06g051360.3 453 371 235 608 339 337 442 517 217 221 164 284 424 540 287 gibberellin 2-beta-dioxygenase 8 (AHRD V3.3 *** A0A2I4EQW7_9ROSI) AT3G11150 Solyc06g051370.1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc06g051380.3 845 605 569 684 447 541 625 505 681 623 625 584 721 706 737 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1PI35_ARTAN) Solyc06g051400.3 2861 2715 2324 1995 2734 2622 2641 2814 2582 3833 2173 2494 1484 1587 1622 omega-3 fatty acid desaturase AT5G05580 Solyc06g051410.4 135 171 213 200 173 169 204 167 240 125 225 218 176 208 211 N-(5'-phosphoribosyl)anthranilate isomerase (AHRD V3.3 *** S8D1B0_9LAMI) AT1G07780 Solyc06g051420.3 1239 1140 1059 976 1032 1036 956 864 774 945 842 828 1191 934 971 nucleic acid-binding protein Solyc06g051425.1 1327 893 1052 1034 708 884 881 650 708 738 987 656 797 996 1212 Unknown protein Solyc06g051440.4 587 462 415 585 416 452 443 466 500 511 431 405 409 457 530 Protein POLLEN DEFECTIVE IN GUIDANCE 1 (AHRD V3.3 *** A0A2G3C5I6_CAPCH) Solyc06g051450.2 67 47 133 65 53 74 78 32 60 37 122 44 43 72 137 Unknown protein Solyc06g051460.4 509 965 986 1027 1183 994 1172 981 1410 638 908 842 756 688 813 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1M3E7_ARTAN) Solyc06g051510.2 303 248 272 235 322 254 316 242 273 225 262 209 188 254 290 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1KT12_ARTAN) AT2G40120 Solyc06g051520.3 1174 886 1091 1207 1306 1171 1173 1151 1030 1178 1248 1130 1092 900 1042 CTD small phosphatase-like protein (AHRD V3.3 *** A0A1J3JJA1_NOCCA) AT3G55960 Solyc06g051525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g051540.4 540 268 324 297 229 254 224 310 161 427 204 355 256 243 372 Protein kinase domain (AHRD V3.3 *** A0A200PWY1_9MAGN) Solyc06g051550.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 fe inefficient AT2G28160 Solyc06g051570.4 902 861 758 1023 825 758 913 967 831 1065 889 895 799 1002 827 NF-X1-type zinc finger protein NFXL2 (AHRD V3.3 *** A0A1U8GWD8_CAPAN) AT5G05660 Solyc06g051575.1 1 2 1 13 13 3 3 5 10 13 19 18 5 11 2 Unknown protein Solyc06g051600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g051610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc06g051620.3 364 278 599 300 284 229 234 207 407 626 1081 296 307 433 652 Phosphoinositide phospholipase C (AHRD V3.3 *** O49951_SOLTU) Solyc06g051630.5.1 32 137 253 239 358 324 321 397 238 193 179 233 76 183 113 Phosphoinositide phospholipase C (AHRD V3.3 *** K4C5V4_SOLLC) AT2G40116 Solyc06g051650.4 467 473 641 491 431 558 552 430 555 494 583 485 541 517 531 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** Q5GA61_SOLLC) Solyc06g051660.1 590 448 1788 1422 351 516 409 401 1041 668 2339 1291 654 1255 1510 Protein EARLY FLOWERING 4 (AHRD V3.3 *** A0A2G2WA22_CAPBA) AT2G40080 Solyc06g051680.1 87 35 444 389 15 6 4 7 769 21 454 372 171 503 578 Protein EARLY FLOWERING 4 (AHRD V3.3 *** A0A2G2Z8T4_CAPAN) AT2G40080 Solyc06g051720.3 376 577 758 686 770 900 869 629 624 654 728 662 774 686 530 GDSL esterase/lipase CPRD49 (AHRD V3.3 *** A0A2G2XS51_CAPBA) AT3G11210 Solyc06g051730.4 581 483 504 437 442 448 489 450 446 527 439 471 304 368 413 ABC1 protein (AHRD V3.3 *** A0A2I0VJC7_9ASPA) AT2G40090 Solyc06g051740.1 128 114 142 199 221 162 166 117 82 90 170 133 137 132 206 Unknown protein Solyc06g051750.3 435 1061 871 781 1158 910 1088 1292 2012 1309 1656 1108 1760 1258 1195 Cytochrome P450 (AHRD V3.3 *** A0A200PWT8_9MAGN) AT5G05690 Solyc06g051760.3 1085 870 735 644 666 721 721 778 810 906 724 749 810 769 770 Arginyl-tRNA--protein transferase (AHRD V3.3 *** A0A2G2WI92_CAPBA) AT5G05700 Solyc06g051770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oleosin 14.9 kDa (AHRD V3.3 *** A0A2G3CHZ7_CAPCH) AT5G26805 Solyc06g051780.2 181 226 201 171 191 132 139 183 192 195 160 215 157 196 161 Nucleotidyltransferase family protein (AHRD V3.3 *-* A0A2U1NBM8_ARTAN) Solyc06g051790.4 1788 1388 1934 1683 1420 1698 1572 1195 1449 1298 2329 1469 1676 1762 2220 Nucleotidyltransferase family protein (AHRD V3.3 *-* AT2G39740.3) Solyc06g051793.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g051797.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 D-lactate dehydrogenase [cytochrome], mitochondrial (AHRD V3.3 *-* A0A1J3HLQ0_NOCCA) Solyc06g051800.3 1 82 29 65 73 67 50 60 129 32 40 32 75 194 233 expansin 1 Solyc06g051810.4 4504 5008 5007 4699 4621 4491 4277 5134 5971 3594 4270 4940 5457 5574 5275 XH/XS domain protein (AHRD V3.3 *** A0A2K3NHW6_TRIPR) AT3G48670 Solyc06g051820.4 614 327 597 318 212 241 222 173 248 404 363 245 243 308 396 Myosin heavy chain-like protein (AHRD V3.3 *** A0A1P8BDH1_ARATH) AT5G53310 Solyc06g051830.3 1 33 8 17 1 11 10 12 22 16 16 32 6 3 16 Potassium transporter (AHRD V3.3 *** A0A200QFU2_9MAGN) Solyc06g051840.1 74 109 160 133 41 95 78 45 84 37 233 61 102 61 116 Solanum lycopersicum Cytokinin Response Factor 6 AT5G53290 Solyc06g051850.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mycorrhiza-inducible inorganic phosphate transporter 5 Solyc06g051860.3 1133 341 283 419 61 58 41 29 346 769 419 265 258 299 1047 mycorrhiza-inducible inorganic phosphate transporter 4 Solyc06g084760.3 32 14 2 9 2 0 0 0 5 11 5 2 1 4 0 Cytochrome P450 (AHRD V3.3 *-* A0A2U1M1Z6_ARTAN) Solyc06g084770.2 3320 807 239 907 176 195 213 96 407 892 477 247 402 594 1703 cytochrome P450 CYP72A219 (AHRD V3.3 --* XP_004244272.1) Solyc06g051900.3 344 290 317 316 336 342 331 310 318 278 273 321 248 306 284 Folylpolyglutamate synthase (AHRD V3.3 *** A0A1J3EY27_NOCCA) AT5G41480 Solyc06g051910.3 2 1 2 8 26 7 10 11 1 9 6 13 6 4 7 Polypyrimidine tract-binding protein-like protein 1 (AHRD V3.3 *-* A0A2G3CWX3_CAPCH) Solyc06g051920.4 662 474 767 584 468 468 425 392 584 696 726 547 484 561 644 Cyclic nucleotide gated channel 1 (AHRD V3.3 *** A0A2U1KHS4_ARTAN) AT5G53130 Solyc06g051930.3 1414 986 467 782 840 773 781 832 940 1351 587 839 636 594 696 Pyruvate kinase (AHRD V3.3 *** A0A1S5VK12_DIOKA) AT3G49160 Solyc06g051940.4 359 128 201 298 63 71 58 55 431 719 412 554 204 351 1132 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1KYU0_ARTAN) Solyc06g051950.4 27 11 6 6 0 4 12 5 2 6 6 5 5 3 29 Nuclear migration protein nudC (AHRD V3.3 *** A0A2G2Z984_CAPAN) Solyc06g051960.3 862 1898 1923 1326 2890 2519 2439 3017 3243 3217 4938 1925 1246 853 1622 Pectinesterase (AHRD V3.3 *** A0A2G2WIV2_CAPBA) AT3G49220 Solyc06g051970.3 106 106 177 148 135 244 227 168 110 190 201 150 96 129 95 Calcineurin B-like protein (AHRD V3.3 *** C3TRS3_MAIZE) AT5G24270 Solyc06g051980.4 383 201 173 248 200 128 163 176 174 345 214 240 136 165 234 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A1U8H5R9_CAPAN) AT3G61790 Solyc06g051990.4 173 197 205 195 175 196 183 145 129 121 83 140 161 173 154 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *** A0A2G3C6G2_CAPCH) AT3G49250 Solyc06g052000.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1LER1_ARTAN) Solyc06g052010.2 18 39 26 110 50 39 46 41 83 86 91 51 33 26 22 SUN-like protein 16 Solyc06g052020.2 20 30 65 161 1 2 0 0 3 22 29 8 7 22 12 protein PSY2 isoform X2 (AHRD V3.3 -** XP_020413373.1) Solyc06g052030.3 606 987 750 755 773 763 826 903 833 604 631 732 951 796 800 Importin subunit beta-1 (AHRD V3.3 *** A0A2G2WLP4_CAPBA) Solyc06g052040.4 0 0 11 0 0 1 0 1 0 0 0 0 0 0 0 Calcium-binding EF hand family protein (AHRD V3.3 *** A0A1P8B806_ARATH) Solyc06g052045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g052050.4 0 0 0 8 2 10 4 3 7 2 6 1 8 23 85 Heat shock protein 70 family (AHRD V3.3 *** A0A200QNK9_9MAGN) Solyc06g052060.3 249 406 608 759 665 969 866 672 418 453 685 544 478 419 526 hypothetical protein (AHRD V3.3 *** AT4G10810.1) AT4G10810 Solyc06g052070.3 1015 624 681 1273 230 455 396 342 647 696 915 530 629 599 876 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PL09_ARTAN) AT5G24320 Solyc06g052080.4 1082 1122 1269 1045 976 1127 1251 1189 968 955 1017 1076 1337 1173 1147 RNA-binding protein 1-like (AHRD V3.3 *** A0A2I4GFY9_9ROSI) Solyc06g052085.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *-* A0A2I4GFY9_9ROSI) Solyc06g052100.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *** A0A2I4GFY9_9ROSI) Solyc06g052110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *-* A0A2I4GFY9_9ROSI) Solyc06g052115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *-* A0A2I4GFY9_9ROSI) Solyc06g052130.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *-* A0A2I4GFY9_9ROSI) Solyc06g052140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *** A0A2I4GFY9_9ROSI) Solyc06g052143.1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *** A0A2I4GFY9_9ROSI) Solyc06g052145.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *** A0A2I4GFY9_9ROSI) Solyc06g052147.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein 1-like (AHRD V3.3 *** A0A2I4GFY9_9ROSI) Solyc06g053140.3 456 669 309 437 1171 800 1035 978 674 573 332 660 516 350 449 Rhodanese-like domain-containing protein 14, chloroplastic (AHRD V3.3 *** A0A2G2WIJ1_CAPBA) AT4G27700 Solyc06g053150.1 18 9 46 11 10 5 3 6 17 13 5 9 20 21 14 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NSJ9_ARTAN) Solyc06g053160.3 623 735 612 531 572 573 655 610 645 567 491 530 955 885 606 ATPase family AAA domain-containing protein 1 (AHRD V3.3 *** A0A1J3K0P4_NOCCA) AT4G27680 Solyc06g053170.4 20 12 11 15 12 4 11 9 7 17 13 15 20 7 18 Cytochrome b5 (AHRD V3.3 *-* A0A1U8GVN8_CAPAN) Solyc06g053180.4 667 759 1004 941 675 744 768 463 745 643 1100 693 1187 1021 1483 Cytochrome b5 (AHRD V3.3 *** A0A1U8GVN8_CAPAN) Solyc06g053190.3 854 930 739 956 679 828 768 722 777 808 664 723 983 1051 1081 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1QCJ9_ARTAN) AT3G49350 Solyc06g053195.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g053200.3 1718 1089 1162 1055 807 902 924 739 779 1349 1273 840 1259 1141 1268 6-phosphogluconolactonase (AHRD V3.3 *** B6UAK0_MAIZE) Solyc06g053210.4 221 158 255 309 250 317 314 236 163 290 282 267 144 205 190 ubiquitin-60S ribosomal protein L40 (AHRD V3.3 *-* A0A2I4GFW8_9ROSI) Solyc06g053220.3 652 169 86 82 0 0 0 2 50 156 165 40 240 530 1132 Homeobox-leucine zipper protein HOX6 (AHRD V3.3 *** A0A2G2WIJ7_CAPBA) Solyc06g053230.4 630 589 615 1009 701 595 663 603 430 891 637 670 680 520 684 plasminogen activator inhibitor (AHRD V3.3 *-* AT1G57680.3) Solyc06g053250.2 0 0 0 6 0 0 2 0 2 0 5 1 1 0 3 Unknown protein Solyc06g053260.1 158 53 22 162 4 13 6 2 42 20 117 23 48 12 22 Auxin-responsive protein SAUR32 (AHRD V3.3 *** A0A2G2Z9Q7_CAPAN) Solyc06g053290.1 62 67 56 102 46 52 41 12 39 45 119 18 30 35 156 SAUR-like auxin-responsive family protein (AHRD V3.3 *** A0A2K3LI44_TRIPR) AT4G00880 Solyc06g053300.3 395 429 435 437 420 431 419 511 645 446 425 444 521 484 366 Polyadenylate-binding protein (AHRD V3.3 *** A0A2K3NXT2_TRIPR) AT1G32790 Solyc06g053310.3 885 987 1559 1083 1208 1171 1212 1141 1127 1145 1452 1088 1009 981 935 Hydroxyacylglutathione hydrolase (AHRD V3.3 *** A0A2K3PCZ5_TRIPR) AT1G06130 Solyc06g053320.4 1423 1743 1398 1284 1760 1642 1707 1586 1336 1217 1056 1506 1497 1781 1172 RNA-binding protein (AHRD V3.3 *** E5GC87_CUCME) AT2G43410 Solyc06g053330.4 1071 1603 1054 882 965 987 841 960 976 677 860 933 1794 1500 916 DNA binding,DNA-directed RNA polymerase (AHRD V3.3 *** A0A2U1KKV5_ARTAN) AT3G13940 Solyc06g053340.3 941 579 487 663 458 554 499 387 464 708 394 586 501 537 526 F-box protein SKIP16 (AHRD V3.3 *** A0A2G3C6E4_CAPCH) AT1G06110 Solyc06g053350.3 1030 1193 1192 1016 1330 1174 1159 1256 1031 1065 1097 951 980 1145 967 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** F4IQT9_ARATH) AT1G06070 Solyc06g053360.4 112 62 174 125 92 95 115 75 73 72 127 76 75 87 63 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A1J3DLC2_NOCCA) AT1G06050 Solyc06g053370.3 98 104 160 148 137 167 156 154 123 86 123 92 147 134 153 Rhomboid protein (AHRD V3.3 *** E5GC88_CUCME) AT3G59520 Solyc06g053375.1 5 3 1 4 0 0 0 2 0 0 9 0 0 4 0 Serine/threonine-protein kinase WNK8 (AHRD V3.3 *-* A0A2G2XHX5_CAPBA) Solyc06g053380.3 5 17 28 54 18 10 7 12 9 20 11 4 18 14 62 Chitinase (AHRD V3.3 *** A0A2U1LR12_ARTAN) AT3G54420 Solyc06g053385.2 167 464 406 356 578 472 486 491 384 320 387 397 616 428 309 Signal recognition particle 14 kDa protein (AHRD V3.3 *** A0A2G2YWM4_CAPAN) AT2G43640 Solyc06g053387.1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 Unknown protein Solyc06g053390.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LCF2_ARTAN) Solyc06g053400.3 1777 1712 1550 1550 1476 1382 1424 1543 1148 1855 1189 1427 2223 1581 1616 Isopropylmalate synthase (AHRD V3.3 *** K4C627_SOLLC) AT1G74040 Solyc06g053410.1 4 0 0 0 11 3 0 1 0 0 6 4 0 0 0 Unknown protein Solyc06g053420.4 140 138 123 182 334 337 354 282 179 129 192 250 108 158 179 C2 domain-containing protein/GRAM domain-containing protein (AHRD V3.3 *** A0A1Q3BEV5_CEPFO) AT3G59660 Solyc06g053430.4 406 608 985 822 1039 1098 1205 902 712 552 930 757 936 852 774 15 kDa selenoprotein-like (AHRD V3.3 *** A0A2I4H843_9ROSI) AT1G05720 Solyc06g053440.3 22 54 77 44 236 200 207 191 67 25 40 46 39 54 22 Serine/Threonine-kinase (AHRD V3.3 *** AT3G59680.2) AT3G59680 Solyc06g053450.4 50525 15135 12081 11575 9302 10027 10104 10201 11591 14980 13604 12665 7732 10020 11527 SUN-like protein 17 AT2G43680 Solyc06g053460.3 201 381 399 291 450 421 411 370 398 243 263 290 446 383 324 Prefoldin 2 (AHRD V3.3 *** A0A2U1MS96_ARTAN) AT3G22480 Solyc06g053470.3 528 625 691 522 642 702 601 515 497 520 544 467 661 665 454 Proteasome assembly chaperone (AHRD V3.3 *** Q8VYQ0_ARATH) AT1G48170 Solyc06g053480.3 1430 2415 1599 1508 2388 2068 2029 2697 2289 1930 1437 1921 1994 1566 1360 Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *** A0A2G2WJJ9_CAPBA) AT2G43710 Solyc06g053490.4 128 533 484 281 355 349 321 256 224 170 389 227 667 607 398 FAM136A-like protein (DUF842) (AHRD V3.3 *** Q5BQ23_ARATH) Solyc06g053510.3 0 0 4 0 9 0 0 1 0 0 1 2 4 1 0 putrescine N-methyltransferase,Pfam:PF01564 Solyc06g053520.4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Spermidine synthase (AHRD V3.3 *** A0A2G3B8N0_CAPCH),Pfam:PF01564 Solyc06g053530.3 1022 935 718 870 943 927 917 921 860 688 824 822 1067 999 845 tetratricopeptide repeat protein 7A-like (AHRD V3.3 *** A0A2I4ENE2_9ROSI) AT4G28600 Solyc06g053540.3 2 2 4 10 6 17 8 5 14 0 10 2 0 0 0 Unknown protein Solyc06g053550.3 74 57 27 36 21 25 22 35 51 42 34 30 68 114 60 Peroxisomal membrane protein PMP22 (AHRD V3.3 *** A0A1U8F4P8_CAPAN) AT4G14305 Solyc06g053560.4 1090 1224 1303 1506 1309 1500 1763 1413 1178 940 1234 1043 1138 1414 1278 Casein kinase I isoform epsilon (AHRD V3.3 *** A0A1U8F4P3_CAPAN) AT4G14340 Solyc06g053570.2 638 523 282 327 409 362 390 671 877 644 297 541 310 573 454 Nuclear-pore anchor protein (AHRD V3.3 *-* A0A142CD35_9LAMI) Solyc06g053580.2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g053590.4 4499 3423 3439 3026 2472 3068 2991 2441 3555 3047 3140 3213 3180 3862 3532 Nuclear-pore anchor protein (AHRD V3.3 *-* A0A142CD35_9LAMI) Solyc06g053600.4 109 477 443 408 774 742 832 712 651 374 466 604 324 439 261 Aldo/keto reductase (AHRD V3.3 *** A0A200QWT0_9MAGN) AT1G04420 Solyc06g053610.3 126 222 179 243 235 271 236 112 517 364 617 479 498 389 444 R2R3MYB transcription factor 14 AT3G23250 Solyc06g053620.4 439 542 293 885 1204 1125 1220 1013 722 912 586 699 444 444 454 phosphoenolpyruvate carboxylase kinase 2 AT3G04530 Solyc06g053630.3 890 665 886 773 727 972 846 821 601 749 865 724 702 690 610 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A2G2WJ77_CAPBA) Solyc06g053640.1 9 41 195 43 12 16 14 11 38 54 377 10 70 25 162 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1Q188_ARTAN) Solyc06g053650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1M6C8_ARTAN) Solyc06g053660.3 885 785 1280 1149 1063 1253 1275 864 713 846 1149 814 667 865 1118 HR-like lesion-inducing protein (AHRD V3.3 *** A0A2K3PBG2_TRIPR) AT1G04340 Solyc06g053665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc06g053670.1 588 314 204 166 90 114 62 92 131 287 133 60 305 222 305 Enoyl-CoA delta isomerase 2, peroxisomal (AHRD V3.3 *** A0A2G2Z9B1_CAPAN) AT4G14430 Solyc06g053690.3 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 tRNA (adenine(58)-N(1))-methyltransferase (AHRD V3.3 *-* A0A1U8FQS6_CAPAN) Solyc06g053695.1 0 0 0 0 4 2 0 0 0 0 0 0 1 0 0 Unknown protein Solyc06g053700.1 121 196 158 152 214 156 279 208 154 179 169 157 181 170 156 hypothetical protein (AHRD V3.3 *** AT1G04330.1) AT4G14450 Solyc06g053710.3 918 947 1112 1066 512 743 629 634 1010 1006 2082 873 700 1094 893 ethylene receptor homolog (ETR4) Solyc06g053720.3 1 7 4 22 9 9 1 0 0 7 0 18 1 10 0 Zinc finger protein (AHRD V3.3 *** A0A200PW66_9MAGN) Solyc06g053730.1 5 19 17 22 3 16 4 3 20 12 44 21 23 9 23 Serine/threonine-protein kinase BLUS1 (AHRD V3.3 *** A0A2G3C6N8_CAPCH) AT4G14480 Solyc06g053740.4 342 530 526 630 732 727 689 814 634 488 378 658 673 642 498 MATH domain-containing protein (AHRD V3.3 *-* A0A1Q3BTU7_CEPFO) AT5G52330 Solyc06g053750.3 3340 1981 2024 1987 1326 1640 1668 1464 1744 2229 1931 1818 1545 1930 2800 MATH domain-containing protein (AHRD V3.3 *** A0A1Q3BTU7_CEPFO) AT1G04300 Solyc06g053760.3 27 712 517 1019 1519 1487 1412 1722 652 314 621 891 89 408 325 Syntaxin-related protein KNOLLE (AHRD V3.3 *** A0A2G2WJ90_CAPBA) AT1G08560 Solyc06g053770.4 78 117 102 93 219 200 147 157 110 99 125 162 78 113 134 DNA repair protein XRCC4 (AHRD V3.3 *** A0A1U8GWB4_CAPAN) AT3G23100 Solyc06g053780.4 176 315 288 280 406 419 400 431 342 238 270 310 286 315 272 Protein WVD2-like 1 (AHRD V3.3 *** A0A2G2WJF4_CAPBA) AT3G23090 Solyc06g053785.1 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 Unknown protein Solyc06g053790.3 1807 1784 1859 1755 2030 2211 1893 1909 2468 1979 2110 2079 2304 1994 2434 Polyketide cyclase/dehydrase and lipid transport superfamily protein (AHRD V3.3 *** F4J2V1_ARATH) AT4G14500 Solyc06g053800.3 1223 1513 992 901 984 982 916 972 869 940 809 916 1723 1351 1027 60S ribosomal export protein NMD3 (AHRD V3.3 *** A0A2G3AZU8_CAPCH) AT2G03820 Solyc06g150118.1 0 0 0 0 2 0 3 0 0 0 0 0 0 3 0 Unknown protein Solyc06g053810.3 1269 1495 1480 1819 3119 3100 3077 2829 2005 1817 1488 2269 1295 1443 1126 p-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** Q0WUY1_ARATH) AT1G04280 Solyc06g053820.4 582 1223 1238 1035 1286 1426 1384 1080 838 587 1019 841 1260 1249 1049 Unknown protein Solyc06g053830.3 202 143 57 49 59 50 83 51 107 91 72 57 57 81 110 auxin-regulated IAA7 Solyc06g053840.3 691 558 267 372 264 341 277 228 575 417 411 258 542 306 334 auxin-regulated IAA4 AT1G04240 Solyc06g053850.4 60 114 74 108 108 109 137 125 98 80 86 133 120 175 124 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QTR8_9MAGN) Solyc06g053860.3 247 358 232 296 230 358 385 284 322 227 280 271 346 353 438 alpha-1,2-Mannosidase (AHRD V3.3 *** A0A328D328_9ASTE) AT5G43710 Solyc06g053870.4 17 34 68 23 44 31 24 20 43 42 89 34 23 24 3 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G2VLA8_CAPBA) Solyc06g053880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-ketoacyl-CoA synthase 20-like (AHRD V3.3 *-* XP_004241035.1) Solyc06g053890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G2YDB4_CAPAN) Solyc06g053900.4 1 0 11 3 0 8 2 2 7 8 0 3 3 0 0 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G2Z9P0_CAPAN) Solyc06g053910.4 2242 802 433 662 521 544 440 447 599 1087 470 421 615 767 1164 DUF506 domain-containing protein (AHRD V3.3 *** A0A1Q3BNU4_CEPFO) AT3G22970 Solyc06g053920.4 828 676 503 499 746 683 551 796 727 843 592 685 628 539 506 hypothetical protein (AHRD V3.3 *** AT3G55760.3) AT3G55760 Solyc06g053930.3 5 7 39 11 5 19 4 8 25 9 16 8 2 3 14 Calmodulin (AHRD V3.3 *** Q39890_SOYBN) AT4G14640 Solyc06g053940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g053950.3 90 11 73 78 4 4 0 3 46 16 55 9 40 98 174 Heat stress transcription factor A-2e (AHRD V3.3 *-* A0A2G2WJ43_CAPBA) Solyc06g053960.3 399 33 95 291 9 3 4 5 216 94 158 52 64 272 359 Heat shock transcription factor (AHRD V3.3 *-* A0A1Y1I763_KLENI) AT1G77570 Solyc06g053970.4 248 86 129 88 66 64 53 51 34 124 89 75 70 92 56 EPIDERMAL PATTERNING FACTOR-like protein 6 (AHRD V3.3 *-* A0A2G2ZV72_CAPAN),Pfam:PF17181 AT4G14723 Solyc06g053980.3 878 550 1006 531 364 414 382 317 464 621 754 606 685 737 1061 Chlorophyllase 2 (AHRD V3.3 *** A0A2U1KJW6_ARTAN) AT5G43860 Solyc06g053990.1 0 4 0 0 0 0 0 0 0 0 0 0 0 3 0 Unknown protein Solyc06g054000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g054010.3 481 410 543 513 361 529 498 412 471 358 534 452 377 421 585 inositol-1,4,5-triphosphate-5-phosphatase 3 AT1G05470 Solyc06g054020.3 960 1521 1621 1505 1585 1886 1829 1975 2330 1416 1518 2070 1559 1924 1811 p-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8AMM9_ARATH) AT1G05460 Solyc06g054030.2 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1NA97_ARTAN) AT1G05450 Solyc06g054040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *-* A0A2I0XCI6_9ASPA) Solyc06g054050.3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 p-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8AMM9_ARATH) AT1G05460 Solyc06g054060.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 Lipid transfer protein (AHRD V3.3 *** Q5MJA5_CAPAN) Solyc06g054070.3 21 24 21 54 85 113 85 95 27 28 91 109 33 31 71 Non-specific lipid-transfer protein-like protein (AHRD V3.3 *** A0A1J6I240_NICAT) Solyc06g054080.3 1434 1333 1083 1164 1318 1025 1041 1382 1153 1426 1012 1388 1323 1190 1082 RNA polymerase II accessory factor, Cdc73 (AHRD V3.3 *** A0A2U1PV17_ARTAN) AT3G22590 Solyc06g054090.2 56 16 22 17 6 9 4 4 26 26 39 4 55 13 98 N-acetyltransferase (AHRD V3.3 *** A0A2N9Z4V7_PAEPO) AT2G32030 Solyc06g054100.2 6 5 3 2 0 1 0 7 1 6 14 0 1 0 0 Folate-biopterin transporter 1, chloroplastic (AHRD V3.3 *-* A0A1U8H2J4_CAPAN) Solyc06g054110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Folate-biopterin transporter 1, chloroplastic (AHRD V3.3 *-* A0A2G2WJ98_CAPBA) Solyc06g054120.2 91 120 194 219 193 210 151 163 150 128 199 209 143 155 144 Folate-biopterin transporter 1, chloroplastic (AHRD V3.3 *** A0A2G2WJ98_CAPBA) AT2G32040 Solyc06g054130.1 3 6 12 2 6 8 3 8 15 6 30 3 8 9 36 DUF1677 domain-containing protein (AHRD V3.3 *** A0A1Q3CNW8_CEPFO) AT3G22540 Solyc06g054140.4 664 360 484 567 380 492 544 374 390 416 602 489 337 381 680 hypothetical protein (AHRD V3.3 *** AT1G05430.1) AT1G05430 Solyc06g054150.1 54 16 43 20 4 14 5 5 32 27 23 4 36 12 34 Heat shock protein (AHRD V3.3 *** Q8VY73_ARATH) Solyc06g054160.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein OBERON 1 (AHRD V3.3 *-* A0A1J3K8V5_NOCCA) Solyc06g054170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 spindle assembly abnormal protein (AHRD V3.3 *-* AT4G14840.3) Solyc06g054180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein OBERON 1 (AHRD V3.3 *-* A0A1J3K8V5_NOCCA) Solyc06g054185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g054190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 spindle assembly abnormal protein (AHRD V3.3 *-* AT4G14840.3) Solyc06g054195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g054200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.2) Solyc06g054210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 spindle assembly abnormal protein (AHRD V3.3 *-* AT4G14840.3) Solyc06g054220.2 2396 1141 782 1333 973 955 991 953 689 1357 1010 1058 774 1089 636 Unknown protein Solyc06g054230.4 1 1 0 5 2 3 1 7 0 0 0 0 0 1 0 Protein OBERON 1 (AHRD V3.3 *** A0A1J3D441_NOCCA) Solyc06g054240.3 87 122 441 293 178 192 219 140 205 99 187 220 234 286 308 5'-nucleotidase SurE (AHRD V3.3 *** A0A1J3EZG0_NOCCA) AT4G14930 Solyc06g054250.4 596 1042 2399 2120 1842 1737 2053 1617 1879 1344 1982 2102 1375 1851 2089 5'-nucleotidase surE-like protein (AHRD V3.3 *** A0A2K3MS27_TRIPR) AT4G14930 Solyc06g054260.1 6938 10174 4912 14372 16416 10636 17380 23005 9237 18179 8406 13045 9364 7307 5884 photosystem 1 reaction center protein subunit 2 AT1G03130 Solyc06g054270.3 521 201 90 123 37 15 14 33 9 82 64 20 37 60 29 Sugar transporter protein 11 AT5G26250 Solyc06g054280.1 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT3G05980.1) AT3G05980 Solyc06g054290.3 1 0 8 4 3 2 0 2 0 1 3 0 1 3 0 2-hydroxyisoflavanone dehydratase (AHRD V3.3 *** A0A1U8G399_CAPAN) Solyc06g054300.1 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KK17_ARTAN) Solyc06g054310.1 3 16 29 5 56 27 30 26 13 3 26 3 7 3 15 Fantastic four-like protein (AHRD V3.3 *** A0A2K3NF15_TRIPR) AT5G19260 Solyc06g150119.1 123 59 138 113 62 90 79 60 77 72 115 61 58 113 187 Unknown protein Solyc06g054315.1 7 7 14 5 17 3 3 9 12 8 11 14 11 17 2 Mitogen-activated protein kinase kinase kinase 3 (AHRD V3.3 --* M3K3_ARATH) Solyc06g150120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g054320.1 14 143 180 125 104 74 72 86 203 81 320 149 109 112 424 Dirigent protein (AHRD V3.3 *** K4C6B8_SOLLC) Solyc06g054330.3 458 649 436 591 561 594 543 545 569 576 494 545 527 478 505 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A1I9LMA8_ARATH) AT3G06060 Solyc06g054360.2 9 26 30 13 34 43 48 26 18 18 47 24 9 18 18 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A1Y1ICE6_KLENI) Solyc06g054370.2 1 8 4 7 4 12 8 3 11 5 5 15 1 4 0 Aluminum induced protein with YGL and LRDR motifs (AHRD V3.3 *** Q94BR2_ARATH) Solyc06g054380.4 416 263 180 217 177 196 215 161 161 189 193 159 209 184 270 RNA-binding protein (AHRD V3.3 *-* A0A2K3L3V0_TRIPR) Solyc06g054390.3 6 18 18 19 78 48 90 64 11 12 16 28 4 18 15 DUF21 domain-containing protein (AHRD V3.3 *** A0A2G2Y4P4_CAPAN) AT4G14240 Solyc06g054400.3 1177 774 865 650 414 657 603 383 569 418 1259 491 787 972 1520 Eukaryotic translation initiation factor 5B (AHRD V3.3 *** A0A2G2WJG0_CAPBA) AT1G76810 Solyc06g054410.4 723 970 1007 1077 1451 1393 1379 1288 1343 1022 1065 1208 956 1128 1330 IAA-amino acid hydrolase ILR1 (AHRD V3.3 *** A0A2G2WJJ8_CAPBA) AT3G02875 Solyc06g054420.3 4856 2021 1801 2081 1321 1279 1166 1308 1557 2910 1815 1942 1623 1660 2257 Serinc-domain containing serine and sphingolipid biosynthesis protein (AHRD V3.3 *** A0A2U1KZJ3_ARTAN) AT3G06170 Solyc06g054430.1 31 45 12 17 17 17 19 30 20 28 39 40 14 9 15 F-box/LRR-repeat protein 4 (AHRD V3.3 *-* A0A1U8GVJ9_CAPAN) Solyc06g054440.2 481 268 167 269 226 302 254 203 252 296 268 248 199 246 219 F-box/LRR-repeat protein 4 (AHRD V3.3 *** A0A1U8GVJ9_CAPAN) AT4G15475 Solyc06g054450.3 237 165 129 120 118 142 110 165 111 106 110 119 104 114 107 glycosyltransferase family protein (AHRD V3.3 *** AT3G59390.2) AT3G59390 Solyc06g054460.1 50 77 95 99 73 48 39 41 81 36 32 101 24 33 46 S-adenosylmethionine decarboxylase proenzyme (AHRD V3.3 *** A0A2G2WJF1_CAPBA) AT5G18930 Solyc06g054470.1 259 217 172 174 163 178 152 127 93 135 137 140 195 140 136 proline-rich nuclear receptor coactivator (AHRD V3.3 *** AT3G21570.1) AT3G21570 Solyc06g054480.3 160 114 119 126 158 170 163 144 116 127 204 91 129 86 119 Receptor-like cytosolic serine/threonine-protein kinase RBK2 (AHRD V3.3 *** A0A2G2ZA35_CAPAN) AT5G18910 Solyc06g054490.3 237 308 293 282 289 211 301 269 303 358 239 241 616 307 164 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1Q140_ARTAN) AT5G18900 Solyc06g054500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Peroxidase (AHRD V3.3 *** K4C6D6_SOLLC) AT2G39040 Solyc06g054510.4 1968 2393 2659 3112 3339 3067 3074 3233 2077 2739 2614 2444 2555 2628 2316 Acyl carrier protein (AHRD V3.3 *** A0A1U8GVI0_CAPAN) AT4G25050 Solyc06g054520.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 (AHRD V3.3 *** A0A2G2YT91_CAPAN) Solyc06g054530.3 359 346 481 557 427 334 451 357 416 450 446 433 436 433 531 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q8VZB1_ARATH) Solyc06g054540.3 374 112 147 212 161 246 264 164 136 230 148 159 60 109 175 E3 ubiquitin-protein ligase MIEL1-like (AHRD V3.3 *** A0A1S4BAM5_TOBAC) AT5G18650 Solyc06g054550.3 424 243 277 187 163 214 184 191 210 380 245 230 323 212 208 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A1P8BAJ1_ARATH) AT5G18640 Solyc06g054560.3 1540 3003 3210 2401 4225 4263 4174 3896 2878 1829 2638 2664 2738 3431 1947 RNA helicase DEAH-box19 AT5G18620 Solyc06g054570.1 27 9 23 48 0 0 0 0 1 4 0 0 21 20 53 monothiol glutaredoxin-S3-like (AHRD V3.3 *** A0A2G2Z9R0_CAPAN) Solyc06g054580.4 495 295 366 332 189 281 250 173 230 329 319 186 300 260 371 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1M9Z7_ARTAN) AT2G39100 Solyc06g054590.3 243 177 250 172 171 158 185 121 110 119 263 123 215 214 257 transmembrane protein (AHRD V3.3 *-* AT5G09270.2) AT5G09270 Solyc06g054600.2 1 0 0 0 4 0 1 1 1 0 2 3 0 0 0 Zinc finger transcription factor 42 Solyc06g054610.2 94 64 104 96 24 78 79 57 82 71 95 101 113 83 54 Unknown protein Solyc06g054620.4 101 110 153 155 104 134 99 129 112 139 190 93 114 147 114 Zinc finger transcription factor 43 Solyc06g054630.3 3 0 31 0 0 0 0 1 2 8 61 7 3 2 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2WJA8_CAPBA) AT5G21960 Solyc06g054640.2 7 13 8 8 12 8 8 18 4 13 11 0 3 4 2 DUF506 domain-containing protein (AHRD V3.3 *-* A0A1Q3CFM9_CEPFO) AT1G77145 Solyc06g054650.3 805 693 757 712 622 827 763 644 734 621 754 632 801 710 907 Integral membrane metal-binding family protein (DUF2296) (AHRD V3.3 *** F4JR68_ARATH) AT4G31080 Solyc06g054660.1 3 0 4 11 5 3 19 3 4 3 18 0 0 3 13 tracheary element differentiation-related 7 (AHRD V3.3 --* AT5G48920.1) Solyc06g054670.2 14 45 16 12 42 67 70 111 32 20 23 30 2 9 27 Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *** A0A2I4GZ93_9ROSI) Solyc06g054680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc06g054685.1 5 0 1 4 0 0 0 0 0 1 4 0 0 1 9 Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *-* A0A2I4GZ93_9ROSI) Solyc06g059710.3 491 303 595 536 99 99 79 36 412 535 982 539 348 581 551 Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *** A0A2I4GZ93_9ROSI) Solyc06g059720.3 5 15 22 4 35 42 21 41 3 12 0 6 33 9 7 Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *** A0A2I4GZ93_9ROSI) Solyc06g059730.3 35 97 48 148 142 93 105 74 168 61 47 92 32 112 165 SlPIN6 AT1G77110 Solyc06g059740.4 309 125 757 539 62 54 48 85 322 313 926 262 328 402 819 Alcohol dehydrogenase (AHRD V3.3 *** A0A2U1MN94_ARTAN) Solyc06g059750.3 5208 3705 3293 3834 3651 3638 3840 4242 3182 4294 2918 3661 2527 3197 3003 Transcriptional corepressor SEUSS (AHRD V3.3 *** A0A2G2WJJ1_CAPBA) AT1G43850 Solyc06g059760.3 3831 3240 2691 2958 2785 2602 2856 3478 2837 3544 2695 3049 2287 3015 2589 Transcriptional corepressor SEUSS (AHRD V3.3 *** A0A2G2WJJ1_CAPBA) AT1G43850 Solyc06g059770.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g059780.1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc06g059790.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A0V0GZ24_SOLCH) Solyc06g059800.3 983 1125 1571 2114 1735 1795 1845 1381 1379 1075 1349 954 1049 917 1488 ACT domain-containing protein ACR3 (AHRD V3.3 *** A0A2G2Z9T5_CAPAN) AT1G76990 Solyc06g059810.1 67 85 126 162 118 151 140 114 65 78 56 53 101 69 197 F-box protein (AHRD V3.3 *-* A0A2K3LER6_TRIPR) AT1G14315 Solyc06g059820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) AT5G62510 Solyc06g059830.3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** M1D162_SOLTU) Solyc06g059840.4 11 19 35 20 1 4 3 4 8 20 6 8 13 17 74 branched chain alpha-keto acid dehydrogenase E1-alpha subunit Solyc06g059850.2 11 8 1 0 0 1 0 4 10 17 16 35 15 18 3 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial (AHRD V3.3 *** A0A2G2WJC6_CAPBA) AT1G21400 Solyc06g059860.3 1313 465 219 248 4 16 3 15 155 278 257 40 606 445 506 patatin-like phospholipase domain protein (AHRD V3.3 *** AT1G76980.1) AT1G76980 Solyc06g059870.1 8352 3389 5126 1559 1475 1355 1426 953 2188 3458 5481 1453 6932 3273 3186 Unknown protein Solyc06g059880.3 1 0 0 0 0 0 0 0 0 1 5 0 0 0 0 Acetolactate synthase (AHRD V3.3 *** A0A2G3C6U7_CAPCH) Solyc06g059930.4 88 42 49 28 7 11 10 3 52 66 87 70 26 54 21 sesquiterpene synthase 1 AT5G23960 Solyc06g059960.4 782 790 958 946 1075 1130 1215 1045 1176 873 1064 993 625 923 1036 Histone-lysine N-methyltransferase ASHH2 (AHRD V3.3 *** A0A2G3C7A5_CAPCH) AT1G77300 Solyc06g059970.4 211 207 458 600 52 136 50 41 58 170 0 315 1 286 54 TPI AT5G20240 Solyc06g059980.3 327 381 354 284 313 334 368 330 351 318 368 266 341 292 341 O-fucosyltransferase family protein (AHRD V3.3 *** A0A2U1QP00_ARTAN) AT3G03810 Solyc06g059990.4 1 1 0 1 14 1 4 1 3 0 0 0 0 0 0 Alkyl transferase (AHRD V3.3 *** K7W9N9_SOLLC) Solyc06g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome 71D7 (AHRD V3.3 *** A0A2G2WHQ9_CAPBA) Solyc06g060010.4 7 2 0 0 14 8 16 3 3 2 1 1 0 3 5 Terpene synthase (AHRD V3.3 *** G5CV42_SOLLC) Solyc06g060015.1 6 2 0 7 8 7 4 5 8 6 11 4 3 6 9 Cytochrome 71D7 (AHRD V3.3 *** A0A2G3C788_CAPCH) Solyc06g060050.1 25 22 26 37 40 42 40 39 32 26 58 38 42 71 14 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3C785_CAPCH) AT5G15340 Solyc06g060060.4 399 294 258 376 374 359 361 434 331 381 301 344 415 272 274 NAD kinase (AHRD V3.3 *-* A0A1Y1I8F5_KLENI) Solyc06g060070.3 0 0 0 0 3 1 0 0 0 1 0 0 0 1 2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QIX6_ARTAN) AT1G77330 Solyc06g060080.2 742 1457 1696 1701 2203 1983 2043 1715 1194 1207 1608 1507 1780 1607 1703 Mitochondrial ATP synthase subunit (AHRD V3.3 *** A0A2K3NL61_TRIPR) AT5G59613 Solyc06g060090.3 586 682 1111 730 861 726 803 762 715 964 919 623 816 747 721 Auxilin-related protein 1 (AHRD V3.3 *** A0A2G2WIZ1_CAPBA) Solyc06g060100.3 97 234 243 295 413 388 380 348 297 182 297 266 254 319 318 Mannose-6-phosphate isomerase (AHRD V3.3 *** A0A1U8GQ16_CAPAN) AT1G67070 Solyc06g060105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc06g060110.3 1295 1333 4117 1629 610 486 460 561 806 1106 4543 1049 979 912 2081 amino acid transporter 2 AT1G77380 Solyc06g060120.3 6126 2867 2656 3014 2163 2355 2469 2311 2510 3522 3118 2809 1970 2824 3197 SWI/SNF complex subunit SWI3C (AHRD V3.3 *** A0A2G3C734_CAPCH) AT1G21700 Solyc06g060130.4 805 708 686 907 915 943 973 838 819 857 830 820 698 841 920 Eukaryotic aspartyl protease family protein (AHRD V3.3 *-* A0A2U1L838_ARTAN) Solyc06g060140.4 388 531 549 669 1043 1238 1339 1233 432 496 342 623 361 567 349 Kinesin domain-containing protein (AHRD V3.3 *** A0A1Q3BVU2_CEPFO) AT1G21730 Solyc06g060150.3 884 902 717 660 762 736 657 696 567 597 456 841 1014 957 603 Replication factor C subunit 5 (AHRD V3.3 *** A0A2G3C770_CAPCH) AT1G77470 Solyc06g060160.3 31 194 202 263 280 327 429 347 329 194 174 374 105 220 84 CELLULOSE SYNTHASE INTERACTIVE 3 (AHRD V3.3 *-* AT1G77460.4) Solyc06g060170.3 116 188 166 157 122 144 120 100 129 99 128 107 150 125 168 Pectin lyase-like superfamily protein (AHRD V3.3 *** Q84K13_ARATH) AT4G33440 Solyc06g060180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *** G5CV42_SOLLC) AT5G23960 Solyc06g060190.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc06g060195.1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MX29_TRIPR) Solyc06g060200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 O-methyltransferase (AHRD V3.3 *-* W0SK39_SESIN) Solyc06g060210.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Rab family GTPase (AHRD V3.3 *** A0A1Y1I8A7_KLENI) Solyc06g060215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 O-methyltransferase, putative (AHRD V3.3 *-* B9S2S3_RICCO) Solyc06g060230.3 3551 2003 1239 1602 754 602 609 618 1738 2628 2251 1164 4615 2053 3397 NAC domain-containing protein (AHRD V3.3 *** A0A2K3N804_TRIPR) AT1G01720 Solyc06g060240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 dnaJ homolog subfamily B member 13-like (AHRD V3.3 *-* A0A2I4F1M3_9ROSI) AT1G11040 Solyc06g060250.3 963 885 574 650 741 678 662 933 826 627 542 646 979 828 797 Aldehyde dehydrogenase (AHRD V3.3 *** A0A2G2WJP7_CAPBA) AT1G44170 Solyc06g060260.3 483 1245 1110 921 1206 1049 1078 1231 985 832 661 1054 1368 1341 906 Stromal ascorbate peroxidase (AHRD V3.3 *** Q9TNL9_TOBAC) Solyc06g060270.4 183 278 520 305 555 674 543 600 419 204 318 421 268 397 281 DUF630 family protein, putative (DUF630 and DUF632) (AHRD V3.3 *-* Q9XI02_ARATH) AT1G21740 Solyc06g060290.4 2061 4503 5268 5005 4703 5359 5426 4660 6825 3901 6676 6755 8171 8104 6414 Protein disulfide-isomerase (AHRD V3.3 *** A0A1U8GVQ2_CAPAN) Solyc06g060300.1 62 35 57 65 21 30 25 33 44 43 90 83 61 48 42 zinc-ribbon domain protein (AHRD V3.3 *** AT1G44414.1) AT1G44414 Solyc06g060310.3 1345 1743 729 1511 3344 3663 3683 2669 899 1414 759 1221 949 635 783 Chlorophyllide a oxygenase, chloroplastic (AHRD V3.3 *** A0A2G3C7C2_CAPCH) AT1G44446 Solyc06g060320.4 7 214 213 236 427 562 596 557 136 109 157 186 82 216 61 filament-like plant protein (AHRD V3.3 *** A0A1U8H275_CAPAN) AT3G05270 Solyc06g060330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor GTE12 (AHRD V3.3 *-* A0A1U7V639_NICSY) Solyc06g060340.3 1109 3817 851 1628 6530 4883 4981 6663 3110 3400 706 2942 1950 797 547 Photosystem II 22 kDa protein, chloroplastic (AHRD V3.3 *** A0A1U8GV91_CAPAN) AT1G44575 Solyc06g060350.4 288 562 771 493 664 895 773 685 643 433 644 551 463 654 505 Replication factor C subunit 1 (AHRD V3.3 *-* G2XAF7_VERDV) AT1G77620 Solyc06g060360.3 520 1397 1647 1333 3201 3304 2863 2833 1410 791 1417 2178 1346 1572 793 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A1P8APG6_ARATH) AT1G44760 Solyc06g060370.3 855 1063 1414 1064 1151 1245 1165 1116 1115 1203 1118 1084 1073 1061 1155 EamA-like transporter family protein (AHRD V3.3 *** A0A2U1L2E6_ARTAN) AT1G77610 Solyc06g060380.3 2020 1016 1324 915 893 841 738 854 825 1128 968 931 656 968 800 Sister chromatid cohesion protein PDS5-like protein A (AHRD V3.3 *** A0A1J3GEG2_NOCCA) AT1G77600 Solyc06g060390.3 423 423 352 446 337 382 421 350 333 257 352 353 465 542 437 Histone-lysine N-methyltransferase ASHR1 (AHRD V3.3 *** A0A1U8GVL2_CAPAN) AT2G17900 Solyc06g060400.3 3238 4518 5054 3446 4374 3785 3984 3938 3079 2950 3738 3401 5345 4500 4210 Ribosomal protein L15 (AHRD V3.3 *** A0A2G2WJY1_CAPBA) AT4G16720 Solyc06g060410.3 74 82 64 64 68 117 81 116 50 87 55 91 50 112 49 Phosphatidylinositol-4-phosphate 5-kinase, putative (AHRD V3.3 *** Q8LAR3_ARATH) AT1G21920 Solyc06g060420.3 530 752 579 546 832 622 682 801 632 590 528 648 907 570 433 Prolyl-tRNA synthetase associated domain-containing protein 1-like (AHRD V3.3 *** A0A2K3MME3_TRIPR) AT1G44835 Solyc06g150122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g060430.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Transmembrane emp24 domain-containing protein p24delta5 (AHRD V3.3 *-* A0A2G2ZA08_CAPAN) Solyc06g060440.2 5 7 12 28 9 2 11 17 11 9 12 16 17 34 2 Transmembrane emp24 domain-containing protein p24delta5 (AHRD V3.3 *** A0A2G2ZAF2_CAPAN) Solyc06g060445.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g060450.3 1 1 7 0 3 4 6 9 3 2 3 10 12 13 0 Transmembrane emp24 domain-containing protein p24delta5 (AHRD V3.3 *** A0A2G2ZAF2_CAPAN) Solyc06g060460.3 418 449 389 524 392 462 463 419 407 427 446 438 528 475 542 transmembrane protein (AHRD V3.3 *** AT1G21370.2) AT1G21370 Solyc06g060470.1 7 10 15 4 1 14 4 0 5 5 7 1 9 4 1 VQ motif-containing protein 20 (AHRD V3.3 *** A0A2G2WJY4_CAPBA) AT3G18690 Solyc06g060480.1 0 0 7 2 0 0 1 0 0 2 0 0 3 2 4 Zinc finger protein ZAT4 (AHRD V3.3 *** A0A2G2WJR7_CAPBA) AT4G35280 Solyc06g060490.3 1191 1334 1435 1157 1353 1466 1234 1351 1184 1191 1343 1086 1811 1420 1107 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *-* A0A2U1LV89_ARTAN) AT1G43700 Solyc06g060500.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A1U8H145_CAPAN) Solyc06g060510.2 262 156 214 266 129 113 115 112 98 464 327 181 140 166 164 DUF1191 domain-containing protein (AHRD V3.3 *-* A0A1Q3BAW9_CEPFO) Solyc06g060520.1 85 162 224 205 285 310 271 167 144 207 232 152 88 85 129 DUF1191 domain-containing protein (AHRD V3.3 *** A0A1Q3BAW9_CEPFO) Solyc06g060530.1 0 0 0 0 1 0 1 0 0 5 0 0 1 0 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4HQ16_9ROSI) AT4G22790 Solyc06g060540.3 62 70 68 37 57 51 78 27 44 54 48 51 27 54 54 AT hook motif DNA-binding family protein (AHRD V3.3 *-* A0A1P8BGC9_ARATH) Solyc06g060550.3 367 611 788 889 772 1086 938 746 503 479 869 713 586 555 580 Cornichon (AHRD V3.3 *** A0A2U1PBX6_ARTAN) AT1G12390 Solyc06g060560.3 69 167 266 476 71 137 175 72 162 126 172 60 254 240 253 hypothetical protein (AHRD V3.3 *** AT2G27830.1) Solyc06g060570.3 4 48 13 18 30 13 19 16 75 33 69 64 8 5 11 dihydrofolate reductase-like (AHRD V3.3 *** A0A2I4ECQ2_9ROSI) Solyc06g060580.3 10 6 67 16 22 21 18 23 14 7 20 5 13 7 2 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVF9_SOLTU) Solyc06g060590.3 69 55 62 153 51 23 31 19 9 22 1 6 64 38 49 Bidirectional sugar transporter SWEET (AHRD V3.3 *** M1B2X7_SOLTU) Solyc06g060600.3 0 0 0 0 0 0 1 0 2 1 0 4 0 0 0 Trehalose 6-phosphate phosphatase (AHRD V3.3 *** A0A1U8H254_CAPAN) Solyc06g060610.2 323 298 323 311 238 346 362 306 363 341 266 344 307 309 274 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G3C7C4_CAPCH) AT1G62600 Solyc06g060620.4 4038 2533 2072 3357 1297 1361 1383 1378 1682 2663 1856 861 2809 1645 2143 Protein NRT1/ PTR FAMILY 6.3 (AHRD V3.3 *** A0A2G2ZAG1_CAPAN) AT1G12110 Solyc06g060623.1 0 2 1 6 0 0 0 0 0 1 0 0 1 2 5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L2B9_TRIPR) ATMG00240 Solyc06g060627.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc06g060630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cation/H(+) antiporter 15 (AHRD V3.3 *** A0A2G3C7E4_CAPCH) AT2G13620 Solyc06g060640.1 31 19 0 32 10 4 12 5 14 10 0 17 6 8 1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc06g060650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g060660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 *** AT4G17250.1) Solyc06g060670.4 1086 743 779 639 433 538 611 469 515 543 616 516 678 717 845 Protein arginine N-methyltransferase (AHRD V3.3 *** A0A2G3C7F1_CAPCH) AT4G16570 Solyc06g060675.1 113 182 161 156 423 324 349 266 129 168 93 135 220 130 84 Unknown protein Solyc06g060680.2 545 294 479 261 50 68 55 53 245 220 874 159 812 368 608 Protein kinase superfamily protein (AHRD V3.3 *** Q9SVY4_ARATH) AT3G57700 Solyc06g060690.3 372 186 629 137 54 51 55 44 129 242 1060 198 244 258 678 Protein kinase superfamily protein (AHRD V3.3 *** Q9SVY4_ARATH) AT3G57700 Solyc06g060700.1 109 49 76 26 22 7 9 0 15 35 82 38 26 43 37 Inactive serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3AY55_CAPCH) Solyc06g060710.4 412 471 1497 885 581 814 733 813 1067 859 1060 1329 416 727 539 Glyco_transf_8 domain-containing protein (AHRD V3.3 *** A0A1Q3D6P8_CEPFO) Solyc06g060720.3 1245 1122 1211 1097 1108 1002 1079 880 1200 979 1222 978 1543 1437 1395 Peroxisome biogenesis protein 19-1 (AHRD V3.3 *** A0A2G3C7H4_CAPCH) AT5G17550 Solyc06g060730.3 1238 832 642 848 972 725 668 944 784 864 851 739 735 764 708 Zf-met domain-containing protein (AHRD V3.3 *-* A0A1Q3D7A8_CEPFO) Solyc06g060735.1 0 0 1 0 4 2 0 0 0 1 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc06g060740.3 13 26 39 33 56 80 48 44 21 16 63 23 14 24 18 Zinc finger protein (AHRD V3.3 *** A0A200PXY0_9MAGN) Solyc06g060750.3 456 451 434 457 449 487 522 362 366 242 453 340 389 472 582 O-fucosyltransferase (AHRD V3.3 *** A0A2P5AVU2_PARAD) AT4G16650 Solyc06g060760.3 128 104 83 94 108 78 57 96 547 447 91 87 149 80 122 tonoplast intrinsic protein 2.3 AT4G17340 Solyc06g060770.3 25 15 21 35 40 21 38 32 30 11 39 20 21 2 9 Formyltetrahydrofolate deformylase-like protein (AHRD V3.3 *** A0A2K3NLL3_TRIPR) AT5G47435 Solyc06g060780.4 864 638 617 437 460 461 564 461 473 539 490 452 561 560 540 phosphatidylserine decarboxylase AT4G16700 Solyc06g060785.1 0 0 6 6 0 7 3 9 10 3 1 3 0 2 1 Unknown protein Solyc06g060790.1 2384 2536 1616 3395 1999 1415 1965 2299 1803 3090 1402 2181 2591 2991 1593 3-isopropylmalate dehydratase small subunit 3 (AHRD V3.3 *** A0A2G3AY61_CAPCH) AT2G43090 Solyc06g060800.4 176 148 132 149 142 145 171 141 130 130 133 130 121 104 160 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QFG6_ARTAN) AT4G16770 Solyc06g060810.3 900 663 570 617 498 476 493 473 458 523 609 496 621 623 645 dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X3 (AHRD V3.3 *** A0A2I4GYQ7_9ROSI) AT1G11755 Solyc06g060820.2 532 280 335 316 216 145 140 204 207 333 165 230 526 357 267 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* AT4G16790.1) Solyc06g060830.3 1918 869 583 1512 1825 1697 2637 1283 1210 868 1226 1090 734 793 597 Homeobox-leucine zipper protein HAT2 (AHRD V3.3 *** A0A2G2WJU4_CAPBA) AT4G16780 Solyc06g060840.1 86 12 13 6 0 2 0 0 17 40 92 9 0 16 36 Oleosin (AHRD V3.3 *** A0A1U8H204_CAPAN) Solyc06g060850.3 493 637 675 685 660 512 637 609 637 533 552 524 779 789 635 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** A0A2G3AY59_CAPCH) AT4G17510 Solyc06g060860.2 5 138 262 220 256 328 349 221 117 78 138 222 73 177 58 ATP-dependent caseinolytic protease/crotonase family protein (AHRD V3.3 *** AT4G16807.1) AT4G16807 Solyc06g060870.1 11 16 134 5 14 20 23 4 10 27 19 12 2 3 0 Phospholipase A1-Ibeta2, chloroplastic (AHRD V3.3 *** A0A2G2ZA78_CAPAN) AT4G16820 Solyc06g060880.4 175 256 150 226 204 209 292 193 189 155 184 151 240 116 261 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A2U1Q205_ARTAN) AT2G35660 Solyc06g060885.1 4 5 21 8 12 9 12 12 10 2 9 9 5 10 6 Unknown protein Solyc06g060890.4 285 288 437 347 348 379 330 258 227 223 495 293 279 344 397 dynamin (AHRD V3.3 *** AT4G17540.1) AT4G17540 Solyc06g060900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g060910.2 211 94 142 157 89 120 57 109 70 131 171 99 62 88 158 Glycerol-3-phosphate transporter 4-like protein (AHRD V3.3 *** A0A2K3PKE8_TRIPR) AT4G17550 Solyc06g060920.3 133 113 196 153 160 194 181 113 99 119 190 105 218 186 220 transcription factor IIIB (AHRD V3.3 *** AT4G17010.1) AT4G17010 Solyc06g060930.1 0 5 0 0 0 1 5 5 1 0 7 8 0 4 0 prephenate dehydrogenase family protein (AHRD V3.3 --* AT1G15710.1) Solyc06g060940.2 291 250 267 313 265 250 220 240 219 200 222 211 346 318 425 GATA transcription factor 26 (AHRD V3.3 *** A0A2G3DC77_CAPCH) AT4G17570 Solyc06g060950.1 7 4 0 7 7 4 0 2 0 1 0 2 1 4 0 Unknown protein Solyc06g060955.1 22 11 3 11 1 5 6 5 8 20 0 3 9 9 0 Unknown protein Solyc06g060960.3 528 380 313 289 255 309 262 237 398 317 327 299 339 458 374 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 (AHRD V3.3 *** A0A2G2WK26_CAPBA) AT2G35160 Solyc06g060970.2 2 1 16 8 7 24 22 16 5 6 16 16 4 1 29 Expansin-like B1 (AHRD V3.3 *** A0A1U8H7M6_CAPAN) Solyc06g060980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcineurin B-like protein (AHRD V3.3 *** A1XCM8_POPEU) Solyc06g060990.4 1186 628 465 508 437 394 384 518 500 777 493 638 657 598 600 Coiled-coil domain-containing protein 97 (AHRD V3.3 *** A0A1J3E117_NOCCA) AT5G47090 Solyc06g061000.3 15701 6670 5102 5330 4955 5432 4976 4406 4417 6243 5384 4981 4944 5046 5349 Casein kinase II subunit beta (AHRD V3.3 *** A0A2G2VI76_CAPBA) Solyc06g061005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g061010.4 107 145 192 200 265 240 179 161 159 88 235 150 132 134 263 FCS-Like Zinc finger 2 (AHRD V3.3 *-* FLZ2_ARATH) Solyc06g061015.1 0 0 0 0 1 6 1 1 1 1 0 6 0 0 0 Phytochrome A-associated F-box protein (AHRD V3.3 *-* A0A2G3CTC4_CAPCH) Solyc06g061020.3 303 257 387 398 318 322 315 369 418 446 1096 412 229 203 486 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** Q8LCK5_ARATH) AT1G32740 Solyc06g061023.1 5 109 81 122 91 141 133 91 197 111 398 364 84 148 96 Cytochrome (AHRD V3.3 *** A0A2G3C7L0_CAPCH) Solyc06g061027.1 368 1386 831 1214 893 941 811 1063 3067 2058 1796 3491 1592 1925 1908 Cytochrome P450 (AHRD V3.3 *** A0A200PQ40_9MAGN) Solyc06g061030.3 8798 7443 4377 6496 9303 10086 9985 8032 4154 4386 5122 5022 5300 6354 8038 Two-component response regulator APRR2-like protein (AHRD V3.3 *** A0A2K3PF46_TRIPR) AT4G18020 Solyc06g061040.4 63 73 26 66 112 90 61 48 18 47 49 18 54 30 263 Ribose-phosphate pyrophosphokinase (AHRD V3.3 *** A0A0U9HNH5_KLENI) Solyc06g061050.4 631 460 508 462 495 564 534 350 405 448 535 446 468 504 630 Unknown protein Solyc06g061070.3 903 1549 2440 1794 2745 2635 2491 2311 2180 1656 2553 2080 1183 1311 2180 Glycine cleavage system H protein (AHRD V3.3 *** A0A1U8GUW6_CAPAN) AT2G35370 Solyc06g061080.3 19 25 30 40 47 60 40 53 44 32 62 43 57 45 28 NAC domain-containing protein 45 (AHRD V3.3 *** A0A2G2ZAF7_CAPAN) AT5G46590 Solyc06g061090.3 65 81 104 132 84 119 67 87 86 76 53 43 84 130 225 TLDc domain protein (AHRD V3.3 *** Q682Q6_ARATH) AT1G32520 Solyc06g061100.4 2 7 8 5 1 5 1 0 3 3 10 0 8 13 18 Aluminum activated malate transporter family protein (AHRD V3.3 *** A0A2U1LIJ8_ARTAN) Solyc06g061110.2 0 1 14 0 1 0 0 0 7 0 5 10 0 0 15 late embryogenesis abundant protein 6 (AHRD V3.3 *** XP_004241969.1) AT1G32560 Solyc06g061120.4 981 512 501 591 376 401 441 421 375 785 377 548 476 449 452 SAC3/GANP/Nin1/mts3/eIF-3 p25 (AHRD V3.3 *** A0A2U1MXB7_ARTAN) AT3G54380 Solyc06g061130.4 198 214 145 207 204 146 143 151 123 157 126 155 151 171 171 Gag-Pol polyprotein/retrotransposon (AHRD V3.3 *** AT2G38695.1) AT2G38695 Solyc06g061140.3 224 179 240 244 250 318 260 232 192 162 308 206 201 186 371 phospholipid hydroperoxide glutathione peroxidase (AHRD V3.3 *** AT4G17960.1) AT4G17960 Solyc06g061150.3 498 819 803 911 1061 1086 1109 1122 776 759 863 770 1010 775 772 AP-2 complex subunit mu (AHRD V3.3 *** A0A2G2WK11_CAPBA) AT5G46630 Solyc06g061160.1 12 9 56 32 33 31 17 20 2 9 3 10 6 28 6 Transcriptional regulator SUPERMAN (AHRD V3.3 *** A0A2G3C7Q2_CAPCH) AT4G17810 Solyc06g061170.3 165 177 220 209 284 307 293 310 222 227 215 221 212 175 127 Mitochondrial carnitine/acylcarnitine carrier-like protein (AHRD V3.3 *** A0A2G2ZAG7_CAPAN) AT5G46800 Solyc06g061180.2 540 486 486 498 340 376 323 421 460 534 485 506 501 366 332 Abscisic acid receptor PYL1 (AHRD V3.3 *-* A0A2G3C7N8_CAPCH) Solyc06g061190.1 936 535 585 788 396 411 445 425 294 821 792 434 474 454 336 Protein HAIKU1 (AHRD V3.3 *** A0A2G3DCE0_CAPCH) AT2G35230 Solyc06g061200.1 16 72 234 175 83 90 101 47 67 62 223 39 69 92 310 glycine-rich protein 1 Solyc06g061210.4 0 0 0 0 0 0 0 0 8 0 17 0 0 11 0 Fucosyltransferase 2 (AHRD V3.3 *** A0A1P8B2Z4_ARATH) AT2G03220 Solyc06g061220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g061225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MZL8_TRIPR) ATMG00240 Solyc06g061230.3 116 169 554 684 54 65 72 87 935 605 717 84 464 286 1271 metallocarboxypeptidase inhibitor precursor (AHRD V3.3 -** NP_001275375.1) Solyc06g061240.4 2851 1116 779 952 284 225 239 231 537 949 833 389 1162 833 1189 PLATZ transcription factor family protein (AHRD V3.3 *** F4IEB6_ARATH) AT4G17900 Solyc06g061250.3 274 604 691 509 428 369 387 345 531 374 443 364 804 728 712 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LC40_ARTAN) AT5G17600 Solyc06g061260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Amino acid transporter (AHRD V3.3 *-* A0A200QES7_9MAGN) Solyc06g061270.2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Amino acid transporter (AHRD V3.3 *-* A0A200QES2_9MAGN) Solyc06g061280.3 204 171 242 204 27 35 29 18 185 190 500 54 79 149 537 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1LGD5_ARTAN) AT2G23910 Solyc06g062290.1 35 57 52 58 73 82 77 84 69 19 39 64 51 36 25 Glycosyltransferase (AHRD V3.3 *** A0A2K3PHM3_TRIPR) Solyc06g062295.1 6 2 0 1 0 2 2 0 6 2 14 2 1 12 5 UBN2_3 domain-containing protein (AHRD V3.3 *** A0A1Q3AR18_CEPFO) AT1G21280 Solyc06g062300.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A2K3KWP2_TRIPR) Solyc06g062310.3 41 56 84 76 93 55 77 83 64 74 57 67 74 73 34 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G3C7H8_CAPCH) Solyc06g062320.3 23 24 64 42 43 48 55 42 35 34 62 23 39 44 16 Flavin-containing monooxygenase (AHRD V3.3 *-* A0A2G3C7H8_CAPCH) Solyc06g062330.3 556 346 400 281 407 416 361 365 363 482 442 414 309 290 338 Glycosyltransferase (AHRD V3.3 *** A0A0A1WDH9_NICAT) Solyc06g062340.3 15 10 20 23 26 31 38 19 24 13 24 19 12 9 35 Unknown protein Solyc06g062350.4 473 659 602 499 759 694 643 745 627 419 501 711 712 633 540 RuvB-like helicase (AHRD V3.3 *** A0A328CVU0_9ASTE) Solyc06g062360.3 1160 716 618 743 541 656 536 623 717 831 641 695 630 804 684 Syntaxin (AHRD V3.3 *** A0A2G3C7Q3_CAPCH) AT5G46860 Solyc06g062370.4 427 3078 4267 1864 2155 2144 1956 2307 67384 11619 35397 35812 4028 4108 3698 acid phosphatase 1-like (AHRD V3.3 *** A0A1U7W9D3_NICSY) Solyc06g062380.3 8 25 45 81 7 20 17 6 694 385 816 523 97 14 292 acid phosphatase 1-like (AHRD V3.3 *** A0A1U7W9D3_NICSY) Solyc06g062390.3 1 2 2 2 2 1 0 0 13 7 40 25 0 0 0 Acid phosphatase 1 (AHRD V3.3 *** A0A314KN17_NICAT) Solyc06g062400.2 208 95 160 194 107 109 90 85 134 96 158 77 153 149 210 protein CHUP1, chloroplastic (AHRD V3.3 *** A0A2I4DVC6_9ROSI) AT1G52080 Solyc06g062420.4 54 25 13 13 0 0 0 0 1 10 14 2 47 83 35 Unknown protein Solyc06g062430.3 76 628 185 417 125 101 103 67 182 481 146 318 697 607 333 Inositol oxygenase (AHRD V3.3 *** A0A2U1PDJ1_ARTAN) Solyc06g062440.4 543 374 412 347 379 382 359 354 341 445 445 348 319 319 407 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc06g062445.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) ATMG00240 Solyc06g062450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *-* A0A1P8B2S5_ARATH) Solyc06g062460.3 471 183 92 535 90 58 74 65 229 515 355 197 85 300 469 bHLH transcription factor136 AT3G21330 Solyc06g062480.4 1065 621 841 1016 897 1041 856 611 665 711 1014 693 657 800 1047 protein EARLY FLOWERING 3-like (AHRD V3.3 *** A0A2I4DNS5_9ROSI) Solyc06g062490.3 45 50 56 32 89 49 78 41 38 32 110 17 94 54 43 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MN76_TRIPR) Solyc06g062500.4 1065 1914 2013 1728 2158 2220 2353 1927 1400 1082 1580 1575 2311 1639 1590 60S ribosomal protein L28 (AHRD V3.3 *** B3TLS3_ELAGV) Solyc06g062510.3 1835 1179 1615 1119 1454 1269 1090 1268 1810 1633 1970 1473 1752 1537 1664 Charged multivesicular body protein 1 (AHRD V3.3 *** A0A1J3HZF6_NOCCA) AT1G17730 Solyc06g062520.1 761 1028 948 757 1046 940 846 933 1041 1035 1192 1613 1246 1097 1147 Dof zinc finger protein (AHRD V3.3 *-* A0A2K3L897_TRIPR) AT3G21270 Solyc06g062530.4 959 895 927 950 900 855 956 894 787 854 626 741 970 1062 795 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** A0A2G3C8Z4_CAPCH) AT1G17720 Solyc06g062540.3 1 10 2 2 7 7 13 15 4 13 7 4 0 3 13 phosphatase (psi14C gene) AT1G73010 Solyc06g062550.4 0 3 0 0 1 1 2 1 0 0 0 0 2 0 0 LES459817 putative phosphatase 14A AT1G73010 Solyc06g062560.2 0 1 0 0 0 2 1 1 0 0 0 0 0 0 0 phosphatase 14B AT1G73010 Solyc06g062570.1 0 5 0 7 0 2 3 1 2 2 0 1 1 2 0 Agenet-like domain-containing protein (AHRD V3.3 *** A0A103YGJ9_CYNCS) Solyc06g062580.3 154 1007 908 635 922 862 933 1028 1060 551 850 840 712 764 642 Beta-galactosidase (AHRD V3.3 *** A0A2G3C8Y3_CAPCH) AT3G13750 Solyc06g062590.4 1136 1069 1050 1208 995 918 961 908 1037 1217 979 1047 1179 1037 1357 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A1U8H5F7_CAPAN) AT3G13772 Solyc06g062600.3 164 160 168 110 188 226 185 170 157 84 216 128 65 100 78 Glucose-methanol-choline (GMC) oxidoreductase family protein (AHRD V3.3 *** A0A2U1MMK8_ARTAN) AT1G72970 Solyc06g062610.2 42 58 46 83 64 100 83 110 64 42 96 83 60 75 90 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QCL3_9MAGN) AT1G17630 Solyc06g062620.2 0 0 0 1 0 0 1 0 3 0 0 0 0 0 0 Unknown protein Solyc06g062630.2 0 0 1 0 0 0 0 0 0 1 0 0 1 3 0 LOB domain-containing protein 27 (AHRD V3.3 *-* A0A2G3C8D0_CAPCH) Solyc06g062640.1 0 0 0 7 0 0 1 0 0 1 11 0 0 2 0 Unknown protein Solyc06g062650.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc06g062660.4 2341 1508 1677 1535 1404 1587 1827 1149 1403 2154 1665 1236 2315 1758 1890 Beta-galactosidase (AHRD V3.3 *** A0A2G2WL43_CAPBA) AT1G72990 Solyc06g062670.3 828 1185 471 879 346 325 435 251 969 598 713 560 696 825 1097 Protein indeterminate-domain 7 (AHRD V3.3 *** A0A2G3C8G8_CAPCH) AT1G55110 Solyc06g062680.3 11 44 67 30 46 119 81 68 37 23 16 60 22 25 23 Polyadenylate-binding protein (AHRD V3.3 *-* A0A2G3B416_CAPCH) Solyc06g062690.4 0 5 5 11 1 11 6 8 11 0 3 6 1 4 0 Nucleosome assembly protein family (AHRD V3.3 *** A9TVZ4_PHYPA) Solyc06g062700.3 577 345 269 250 159 185 223 190 292 251 285 248 320 354 325 SMAD/FHA domain-containing protein (AHRD V3.3 *** F4JEI7_ARATH) Solyc06g062720.2 6 3 3 1 0 6 2 4 0 1 5 2 2 4 14 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* B4FMA8_MAIZE) Solyc06g062730.2 1 2 0 4 10 14 1 3 1 2 0 3 3 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4I906_ARATH) Solyc06g062740.2 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4I906_ARATH) Solyc06g062750.3 0 9 1 30 12 23 18 22 6 6 2 8 5 8 22 5'-nucleotidase SurE (AHRD V3.3 *** A0A1J3IMC7_NOCCA) AT1G72880 Solyc06g062760.3 1085 1705 1512 1283 1674 1305 1405 1499 993 1284 1209 1527 1748 2017 1054 50S ribosomal protein L34 (AHRD V3.3 *** A0A2G3C8E3_CAPCH) AT3G13882 Solyc06g062765.1 508 586 795 795 1136 957 870 839 776 680 926 853 626 579 744 DEAD-box ATP-dependent RNA helicase (AHRD V3.3 *** AT5G57000.2) AT1G72690 Solyc06g062780.4 1601 1283 1460 1436 1178 1240 1232 1151 1280 1695 1324 1201 1397 1289 1314 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A2G2WKW9_CAPBA) AT1G17500 Solyc06g062790.3 3648 2470 3481 3186 2140 2373 2226 1747 2187 2197 2843 1938 2475 3036 3554 Casein kinase I isoform epsilon (AHRD V3.3 *** A0A1U8HDP9_CAPAN) AT1G72710 Solyc06g062800.4 155 177 131 173 32 30 45 11 69 98 117 69 351 256 206 RNA helicase DEAD19 AT1G54270 Solyc06g150123.1 0 4 0 0 0 2 2 0 0 0 0 2 0 0 2 Unknown protein Solyc06g062810.1 490 939 1121 915 1010 1086 982 928 873 736 973 776 988 851 935 Glycylpeptide N-tetradecanoyltransferase (AHRD V3.3 *** A0A1U8H525_CAPAN) AT5G57020 Solyc06g062820.4 1 14 8 8 18 21 11 10 3 4 15 10 1 9 1 Protein kinase family protein (AHRD V3.3 *-* A0A1P8BD07_ARATH) Solyc06g062830.4 188 104 97 121 159 146 142 132 89 132 177 111 106 150 139 60S ribosomal protein L18a-like protein (AHRD V3.3 *-* A0A1J3E1C5_NOCCA) Solyc06g062840.4 1160 1815 1223 1700 1919 1701 1752 2189 1582 1604 1165 1885 1335 1663 997 Threonine synthase, chloroplastic (AHRD V3.3 *** A0A1U8H4Z2_CAPAN) AT4G29840 Solyc06g062850.3 620 560 475 413 345 475 371 452 388 496 347 495 494 535 401 PHD finger protein ALFIN-LIKE 5 (AHRD V3.3 *** A0A2G3C8F0_CAPCH) Solyc06g062860.4 1815 1428 1504 1406 1250 1431 1358 1391 1402 1771 1190 1604 1294 1490 1290 Polyadenylate-binding protein-interacting protein 4 (AHRD V3.3 *-* A0A2G3C8H0_CAPCH) AT3G14010 Solyc06g062870.4 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 Phospholipid:diacylglycerol acyltransferase (AHRD V3.3 *** A0A2U1KQW5_ARTAN) Solyc06g062880.2 610 310 226 255 265 261 236 254 178 238 184 217 270 237 274 Protein Brevis radix-like 1 (AHRD V3.3 *** A0A1U8H4Y3_CAPAN) AT3G14000 Solyc06g062900.4 491 366 499 475 320 398 581 320 377 284 489 413 260 421 505 Transcription initiation factor TFIID subunit 12 (AHRD V3.3 *** A0A1U8HBM7_CAPAN) Solyc06g062910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g062920.3 83 9 81 3 0 0 0 7 18 96 247 12 39 42 51 auxin-regulated dual specificity cytosolic kinase Solyc06g062930.1 0 0 0 3 13 8 3 2 4 0 0 2 9 0 0 hypothetical protein (AHRD V3.3 *-* AT1G54120.1) AT1G54120 Solyc06g062940.4 778 1088 1114 1199 1121 1140 1135 1042 888 952 1022 856 1264 911 738 Ring box protein (AHRD V3.3 *** C3SA59_BRADI) AT3G42830 Solyc06g062950.1 3556 3700 3201 5066 4522 3643 3334 5798 6796 9432 4167 9626 3341 4391 4271 Subtilisin-like protease (AHRD V3.3 *** A0A1J3JR60_NOCCA) AT3G14067 Solyc06g062960.3 12 2 33 5 1 4 3 6 25 26 43 17 19 49 192 DUF1677 domain-containing protein (AHRD V3.3 *** A0A1Q3B0U5_CEPFO) AT1G72510 Solyc06g062970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT1G17400.2) Solyc06g062980.3 80 140 157 222 240 256 204 237 165 151 134 199 177 177 195 U6 snRNA-associated Sm-like protein LSm1 (AHRD V3.3 *** A0A2G3C8I8_CAPCH) AT3G14080 Solyc06g062990.3 328 285 415 276 348 312 356 316 383 241 373 321 392 297 325 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1U8H4Y9_CAPAN) AT3G14090 Solyc06g063000.3 14817 7582 4619 4958 3525 3305 3228 4176 4978 5528 4383 5197 5181 5707 5384 Oligouridylate-binding protein 1A (AHRD V3.3 *** A0A2G3C8H4_CAPCH) AT1G17370 Solyc06g063010.4 3693 2917 2786 2584 2378 2458 2320 2670 2800 2820 3067 2448 3130 2969 3128 nuclear receptor coactivator (AHRD V3.3 *** AT1G72390.2) AT1G72390 Solyc06g063020.4 430 482 497 536 696 767 733 780 486 283 589 576 305 489 441 Zinc finger transcription factor 44 Solyc06g063030.3 475 436 569 608 647 572 535 450 590 548 778 552 521 509 688 25.3 kDa vesicle transport protein (AHRD V3.3 *** A0A2G2V904_CAPBA) AT1G11890 Solyc06g063040.1 5 36 38 55 145 131 97 162 41 36 46 55 39 43 25 2-alkenal reductase (NADP(+)-dependent) (AHRD V3.3 *** A0A1U8H4Y5_CAPAN) AT5G16990 Solyc06g063050.4 4 7 30 7 17 14 21 24 13 7 0 13 0 2 0 GPI-anchored adhesin-like protein (AHRD V3.3 *** AT3G14172.2) Solyc06g063060.3 76 32 93 20 7 0 5 8 16 46 54 10 23 37 38 Dormancy/auxin associated protein (AHRD V3.3 *-* A0A2K3JP12_TRIPR) AT1G54070 Solyc06g063070.3 2306 2212 2858 2244 1234 1122 1152 1185 2703 2691 2995 1499 1968 2089 3527 Ethylene Response Factor A.3 AT1G53910 Solyc06g063080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3D0D5_CAPCH) Solyc06g150124.1 0 1 0 0 12 10 2 7 2 1 0 0 1 0 0 FCS-Like Zinc finger 18 (AHRD V3.3 *-* FLZ18_ARATH) Solyc06g063090.4 856 872 752 657 769 690 595 689 901 838 739 586 1866 1282 997 Alanine aminotransferase 2 (AHRD V3.3 *** A0A2G3C8J0_CAPCH) AT1G17290 Solyc06g063100.3 272 254 307 288 371 255 227 254 240 205 177 272 207 262 158 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200PV82_9MAGN) AT1G17280 Solyc06g063110.3 12 10 6 26 21 23 20 25 15 10 34 24 14 22 15 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LDD8_ARTAN) AT1G72310 Solyc06g063120.4 11 72 81 63 263 349 323 329 155 80 118 183 66 69 75 O-fucosyltransferase family protein (AHRD V3.3 *** F4HTC2_ARATH) AT5G50420 Solyc06g063130.3 226 332 285 215 297 290 292 248 231 173 179 225 266 264 203 K+-H+ exchange-like protein (AHRD V3.3 *** AT1G53760.1) AT1G53760 Solyc06g063140.4 3020 5460 4580 4536 5550 5468 5658 6384 5425 4020 3704 5036 6237 6044 4209 26S protease regulatory subunit 7 (AHRD V3.3 *** A0A1U8FAJ3_CAPAN) AT1G53750 Solyc06g063150.4 1 5 0 0 30 23 32 11 4 3 0 0 0 1 0 protein STRUBBELIG-RECEPTOR FAMILY 6-like (AHRD V3.3 *** A0A2G2ZB50_CAPAN) AT1G53730 Solyc06g063160.1 13 30 15 14 51 33 44 26 27 28 16 29 12 23 15 Unknown protein Solyc06g063170.3 299 459 438 430 474 511 571 499 369 312 355 352 330 492 476 Glutamate receptor (AHRD V3.3 *** A0A2G2WKQ6_CAPBA) Solyc06g063180.3 165 187 180 151 73 75 115 76 247 246 386 266 173 235 147 glutamate receptor-like 2.2 Solyc06g063190.3 153 129 61 166 43 45 33 59 147 127 87 74 122 57 34 glutamate receptor-like 2.3 Solyc06g063200.2 1 1 3 6 0 0 0 0 0 2 0 0 8 10 1 glutamate receptor-like 2.4 Solyc06g063210.3 696 378 778 373 82 109 81 116 286 727 666 238 595 440 292 glutamate receptor-like 2.5 Solyc06g063220.3 868 1401 1704 1444 1578 1560 1793 1499 1109 1003 1635 1162 1472 1442 1633 ATP synthase subunit epsilon, mitochondrial (AHRD V3.3 *** A0A2G3D1F3_CAPCH) AT1G51650 Solyc06g063230.3 3019 2879 2918 2750 3483 4021 3511 3286 2313 2999 2612 3259 2148 2566 2419 WD repeat protein (AHRD V3.3 *** AT1G73090.1) AT1G73090 Solyc06g063240.3 1406 2088 1548 1913 2486 2320 2732 2502 2271 2268 2286 1630 1997 1585 1908 O-fucosyltransferase family protein (AHRD V3.3 *** A0A061GA16_THECC) AT1G51630 Solyc06g063250.3 690 985 1035 1051 1167 1268 1166 993 942 862 1049 998 913 1010 988 Cation diffusion facilitator family transporter (AHRD V3.3 *** A0A317RWF5_9PSEU) AT1G51610 Solyc06g063260.4 147 103 132 75 61 96 46 59 102 82 112 84 69 99 83 alpha-1,2-Mannosidase (AHRD V3.3 *** A0A2G2WKP9_CAPBA) AT1G51590 Solyc06g063270.4 244 265 171 187 170 152 138 189 183 185 148 171 216 237 191 Plant organelle RNA recognition domain containing protein (AHRD V3.3 *** A0A2P5CZH1_TREOI) AT4G33495 Solyc06g063280.1 738 798 91 489 1283 943 664 1107 341 765 103 556 767 175 153 Zinc finger protein (AHRD V3.3 *** A0A2K3M6E5_TRIPR) AT3G21150 Solyc06g063290.3 684 839 595 570 776 692 663 833 568 560 469 744 941 834 536 Pyridoxamine 5'-phosphate oxidase family protein (AHRD V3.3 *** Q9C8K8_ARATH) AT1G51560 Solyc06g063300.4 610 356 271 438 444 370 410 358 399 391 345 336 312 453 566 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G2WKX9_CAPBA) Solyc06g063310.2 2195 2843 4262 4234 4302 4370 4580 3337 2865 2430 4169 3305 3275 3064 3986 ATP-dependent RNA helicase (AHRD V3.3 *** AT4G30010.1) AT4G30010 Solyc06g063320.3 2673 1555 2027 1746 1185 1020 1045 899 1320 1835 1905 1304 1921 1651 1608 hypothetical protein (AHRD V3.3 *** AT1G16840.4) AT1G16840 Solyc06g063330.3 11 13 40 35 47 50 61 67 14 32 36 33 26 12 16 Vacuolar ATP synthase catalytic subunit (AHRD V3.3 *** A0A0A7LU40_9ASPA) AT1G78900 Solyc06g063340.3 147 307 469 288 427 428 520 543 264 218 212 381 335 387 119 DUF1666 family protein (DUF1666) (AHRD V3.3 *** Q8L795_ARATH) AT3G20260 Solyc06g150125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g063360.4 215 189 165 255 160 190 153 161 191 166 191 124 141 136 179 Protein STRUBBELIG-RECEPTOR FAMILY 5 (AHRD V3.3 *** A0A2G2ZBB2_CAPAN) AT1G78980 Solyc06g063350.1 17 26 61 24 21 41 28 29 17 11 49 37 30 34 30 Unknown protein Solyc06g063370.3 6773 12965 5889 9491 23251 20458 21654 22903 11571 15240 5388 11161 7770 4200 4800 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G2V937_CAPBA) AT4G10340 Solyc06g063380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain (AHRD V3.3 *-* A0A200PTP1_9MAGN) Solyc06g063390.3 2 3 0 4 0 0 0 0 0 0 0 0 0 0 4 Wound-induced basic protein (AHRD V3.3 *** A0A1U8H216_CAPAN) AT3G07230 Solyc06g063400.3 0 0 15 0 0 3 1 0 1 0 0 0 2 0 0 Wound-induced basic protein (AHRD V3.3 *** A0A1U8H216_CAPAN) AT3G07230 Solyc06g063410.4 326 238 253 235 197 221 228 229 243 187 185 203 218 219 182 ATP-dependent Clp protease ATP-binding subunit ClpX (AHRD V3.3 *** A0A2G2V959_CAPBA) AT1G33360 Solyc06g063420.4 1281 900 837 736 768 863 877 847 779 703 675 713 765 936 1166 General transcription factor 3C polypeptide 3 (AHRD V3.3 *** A0A1J3DRP8_NOCCA) AT1G17680 Solyc06g063430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain (AHRD V3.3 *-* A0A200QKH5_9MAGN) AT4G10350 Solyc06g064430.1 19 29 35 42 47 47 50 62 47 45 24 40 31 42 37 Longin domain-containing protein (AHRD V3.3 *** A0A1Q3BVJ4_CEPFO) AT4G10170 Solyc06g064440.3 484 562 792 743 754 808 788 678 574 531 761 586 489 639 677 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B8Z6_ARATH) AT4G10150 Solyc06g064450.3 668 397 324 447 543 485 395 494 463 620 420 563 456 365 352 E3 ubiquitin-protein ligase (AHRD V3.3 *** Q9C803_ARATH) AT1G33490 Solyc06g064460.4 1131 1955 2208 1507 2621 2325 2188 2719 1902 1217 1703 2005 1612 1763 1608 60S ribosomal protein L7a (AHRD V3.3 *** A0A2G3DGL0_CAPCH) AT3G62870 Solyc06g064470.4 3761 7941 5902 4250 7094 6527 6222 7108 6068 3907 4217 5544 9073 7252 4957 60S ribosomal protein L7a (AHRD V3.3 *** A0A2G3DGL0_CAPCH) AT3G62870 Solyc06g064480.4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 protein TAP1-like (AHRD V3.3 -** XP_022886876.1) Solyc06g064490.2 280 206 385 459 315 367 318 268 364 311 389 288 307 305 428 Exostosin-like protein (AHRD V3.3 *** A0A2U1NB73_ARTAN) Solyc06g064500.3 596 286 420 298 213 158 168 181 510 567 442 386 409 409 376 Myricetin O-methyltransferase 2 (AHRD V3.3 *** F2YTN5_SOLHA) Solyc06g064510.2 10 30 49 39 27 47 33 38 26 80 12 50 108 32 51 O-methyltransferase (AHRD V3.3 *** A0A1B4Z3W3_9ROSA) Solyc06g064520.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1-4)-beta-mannan endohydrolase precursor Solyc06g150126.1 0 0 0 0 0 0 1 2 0 0 2 0 0 0 0 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** A0A1U8FCX0_CAPAN) Solyc06g064530.1 3 3 0 7 0 2 0 2 0 4 0 2 6 3 4 Unknown protein Solyc06g064533.1 5 1 0 0 2 1 7 8 4 3 5 0 0 0 0 Unknown protein Solyc06g064537.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** A0A1U8FPV1_CAPAN) Solyc06g064540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1L1H7_ARTAN) AT3G26660 Solyc06g064550.3 409 920 576 1072 1617 1658 1652 1916 921 580 352 784 1196 823 847 Aspartokinase-homoserine dehydrogenase (AHRD V3.3 *** O63067_SOYBN) AT1G31230 Solyc06g064560.4 51 35 47 39 58 45 52 38 32 18 59 29 60 47 32 DNA ligase-like protein (AHRD V3.3 *** AT1G12790.1) AT1G12790 Solyc06g064570.3 458 626 494 753 937 865 1030 990 872 703 685 864 611 629 561 SNARE associated Golgi protein family (AHRD V3.3 *** B6STF9_MAIZE) AT1G22850 Solyc06g064580.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 044 Solyc06g064590.3 0 0 3 0 0 0 0 0 1 0 10 0 0 2 1 bHLH transcription factor 045 Solyc06g064600.1 28 24 35 25 15 17 22 16 30 12 16 13 15 20 3 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8EK42_CAPAN) AT1G56690 Solyc06g064610.1 115 75 10 102 23 23 18 16 49 61 15 30 35 14 19 hypothetical protein (AHRD V3.3 *-* AT1G55365.1) AT1G55365 Solyc06g064620.3 0 2 12 1 7 2 1 0 1 0 0 1 8 1 0 beta-fructofuranosidase, insoluble isoenzyme CWINV1-like (AHRD V3.3 *** A0A2I4GXG9_9ROSI) AT1G55120 Solyc06g064630.3 1788 4521 3584 2724 3603 3615 3936 3838 2501 2152 2165 2892 4774 4014 3303 Ribosomal protein L15 (AHRD V3.3 *** A0A2G3CLB1_CAPCH) AT4G16720 Solyc06g064640.3 111 212 180 224 253 230 242 229 228 186 179 174 216 189 146 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NX70_ARTAN) AT4G10030 Solyc06g064650.4 18 3 0 0 0 0 0 3 0 5 0 9 0 7 0 11-beta-hydroxysteroid dehydrogenase-like 5 (AHRD V3.3 *** A0A2G3AJQ9_CAPAN) AT4G10020 Solyc06g064660.4 131 101 172 140 69 62 47 58 81 110 70 92 142 164 110 Cyclin-dependent kinase C-1 (AHRD V3.3 *** A0A1U8GPD8_CAPAN) AT1G33770 Solyc06g064670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-alkenal reductase (NADP(+)-dependent) (AHRD V3.3 *-* A0A2G2ZP98_CAPAN) Solyc06g064673.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g064677.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADP-dependent alkenal double bond reductase P1 (AHRD V3.3 *-* A0A2I0W3B4_9ASPA) Solyc06g064680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-coding resistance gene analog (AHRD V3.3 *-* B3V819_TOBAC) Solyc06g064690.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-coding resistance gene analog (AHRD V3.3 *** B3V819_TOBAC) Solyc06g064700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nucleoporin autopeptidase (AHRD V3.3 *-* AT1G10390.3) Solyc06g064710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NB-LRR tospovirus immune receptor (AHRD V3.3 *-* A0A221IWU7_9SOLN) Solyc06g064720.1 0 3 0 0 15 0 2 6 5 2 4 11 0 2 2 NB-LRR tospovirus immune receptor (AHRD V3.3 *** A0A221IWV0_9SOLN) Solyc06g064730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nucleoporin autopeptidase (AHRD V3.3 *-* AT1G10390.3) Solyc06g064740.4 0 0 1 0 0 0 2 0 0 0 0 0 3 1 0 nuclear nucleic acid-binding protein C1D (AHRD V3.3 *-* A0A2I4FPU0_9ROSI) Solyc06g064750.1 0 1 1 2 0 2 0 4 0 3 1 0 0 0 0 Reistance protein F (AHRD V3.3 *** I7AL54_SOLLC) Solyc06g064760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reistance protein F (AHRD V3.3 *** I7AL54_SOLLC) Solyc06g064770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g064790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200R7W2_9MAGN) Solyc06g064800.2 0 0 16 42 7 9 8 4 8 14 12 34 3 1 0 Glucuronoxylan 4-O-methyltransferase 2 (AHRD V3.3 *** A0A2G3AJU2_CAPAN) Solyc06g064810.3 285 459 491 304 702 528 559 498 322 311 402 328 407 423 374 zinc finger/BTB domain protein (AHRD V3.3 *** AT1G33810.1) AT1G33810 Solyc06g064820.3 85 643 731 919 1253 1456 1128 1357 772 352 455 1052 179 641 189 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3DGI0_CAPCH) AT1G71691 Solyc06g064830.3 742 921 698 714 840 690 660 1005 845 757 489 818 1148 874 610 WD-40 repeat protein AY032884 AT1G73720 Solyc06g064840.4 0 0 0 5 1 0 0 1 1 0 8 0 0 1 0 AGAMOUS-like MADS-box transcription factor (AHRD V3.3 *** K7WPA8_NARBU) Solyc06g064850.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *** A0A2G2WKR6_CAPBA) Solyc06g064860.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B8D5_ARATH) Solyc06g064870.4 295 369 374 349 508 383 461 456 467 383 421 470 517 395 332 Methyl esterase 12 (AHRD V3.3 *** A0A2U1MDH1_ARTAN) AT1G33990 Solyc06g064880.3 409 259 320 234 103 84 84 105 185 258 225 218 306 262 250 Nitrilase family protein (Carbon-nitrogen hydrolase) (AHRD V3.3 *** A0A166TMM8_9PEZI) Solyc06g064890.4 815 700 615 616 727 791 708 758 899 740 687 725 918 784 713 Transcription initiation factor IIE subunit beta (AHRD V3.3 *** A0A1Q3BB81_CEPFO) AT4G20330 Solyc06g064900.3 10 2 3 0 0 0 1 0 1 0 8 0 2 6 3 Unknown protein Solyc06g064910.3 1964 1075 924 1112 1038 1125 1105 1170 1378 1457 991 1088 902 1199 1251 T-complex 11 (AHRD V3.3 *** A0A200QKH0_9MAGN) Solyc06g064920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 p-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8AUC4_ARATH) Solyc06g064930.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A1P8B8D5_ARATH) Solyc06g064940.3 3829 7661 5608 5707 8206 7514 8089 7829 7212 3608 5690 4880 4680 5624 5406 Patellin-5 (AHRD V3.3 *** A0A2G2WKZ3_CAPBA) AT1G22530 Solyc06g064960.3 0 3 1 5 0 6 4 2 5 5 1 0 4 6 0 GDSL esterase/lipase 5-like (AHRD V3.3 *** A0A1U8FAQ0_CAPAN) AT5G40990 Solyc06g064970.4 5 0 0 0 0 0 0 0 3 0 0 0 0 4 0 GDSL esterase/lipase 5-like (AHRD V3.3 *** A0A1U8FAQ0_CAPAN) Solyc06g064980.3 0 0 0 0 6 6 1 2 2 0 0 0 2 0 0 GDSL esterase/lipase 5-like (AHRD V3.3 *** A0A1U8FAQ0_CAPAN) AT5G40990 Solyc06g064990.2 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase 5-like (AHRD V3.3 *** A0A1U8FAQ0_CAPAN) AT5G40990 Solyc06g065010.4 0 2 2 14 29 3 2 12 7 1 20 12 13 9 0 GDSL esterase/lipase 2-like (AHRD V3.3 *** A0A2G2ZB04_CAPAN) AT5G40990 Solyc06g065020.3 2335 1236 1461 1598 1207 1337 1422 993 1258 1757 1601 1232 1143 1228 1793 Protein NRT1/ PTR FAMILY 5.12 (AHRD V3.3 *** A0A2G2WK86_CAPBA) AT1G22540 Solyc06g065030.3 525 539 533 453 351 354 319 378 426 890 453 376 1086 486 302 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G3C8C9_CAPCH) Solyc06g065040.4 3231 1518 853 1001 1271 1098 948 1318 1036 1892 585 1221 1207 865 656 bHLH transcription factor 086 Solyc06g065050.2 474 41 1 8 0 0 0 0 13 22 2 14 9 47 58 Late embryogenesis abundant domain-containing protein / LEA domain-containing protein (AHRD V3.3 *** Q9C7H3_ARATH) AT1G72100 Solyc06g065060.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1LDC6_ARTAN) AT5G44440 Solyc06g065070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1LDC6_ARTAN) AT5G44440 Solyc06g065073.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Proteinase inhibitor type-2 (AHRD V3.3 *-* A0A2G2XU31_CAPAN) AT1G72060 Solyc06g065077.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Proteinase inhibitor type-2 (AHRD V3.3 *-* A0A2G2X8Q0_CAPBA) AT1G72060 Solyc06g065080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase BRE1A-like (AHRD V3.3 *-* XP_010314382.1) Solyc06g065100.3 4486 2142 1599 2438 2275 2158 2510 1847 1768 4389 3614 2321 2510 2072 2016 R2R3MYB transcription factor 3 Solyc06g065120.1 3 10 0 1 0 8 6 5 4 3 0 1 1 1 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3NQB9_TRIPR) Solyc06g065130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 disease resistance protein RRS1-like (AHRD V3.3 --* A0A2I4G886_9ROSI) Solyc06g065140.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3MPJ7_TRIPR) Solyc06g065150.1 0 0 0 0 0 2 0 2 0 0 0 1 0 0 7 Disease resistance protein RPS4 (AHRD V3.3 *-* A0A1J3HFR6_NOCCA) AT4G19470 Solyc06g065160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g065170.4 790 1172 1092 1198 1493 1350 1359 1416 1580 1091 1180 1371 1245 1321 1165 Vacuolar protein-sorting-associated protein 11-like protein (AHRD V3.3 *** A0A2G2WKC4_CAPBA) AT2G05170 Solyc06g065180.3 1374 2932 3607 2822 2986 3221 3275 2697 2482 1799 2836 2159 3775 3084 3221 SLL1 protein (AHRD V3.3 *** B6SMM6_MAIZE) AT1G72020 Solyc06g065190.1 643 560 531 468 821 731 784 813 631 581 630 379 747 530 317 TCP transcription factor 13 AT1G58100 Solyc06g065200.4 164 143 135 140 111 187 147 128 128 77 127 96 150 165 236 beta-mannosyltransferase-like protein (AHRD V3.3 *** AT2G17350.1) AT2G17350 Solyc06g065210.4 516 525 683 451 791 853 846 827 647 707 715 593 484 498 634 Neutral/alkaline invertase (AHRD V3.3 *** I0CL58_MANES) AT4G09510 Solyc06g065220.1 0 1 1 8 4 12 1 4 2 0 0 2 0 0 0 SAUR-like auxin-responsive protein family (AHRD V3.3 *** Q9M0P0_ARATH) AT4G09530 Solyc06g065230.3 464 540 588 471 649 524 514 605 625 452 413 532 760 544 586 N-acetyltransferase (AHRD V3.3 *** A0A0U9HKN0_KLENI) AT1G03150 Solyc06g065240.3 451 444 427 420 473 415 376 419 352 478 354 457 406 433 470 alpha-1,4-fucosyltransferase AT1G71990 Solyc06g065250.1 206 301 316 335 338 342 374 327 371 228 300 299 319 324 296 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3HNQ0_COCAP) AT1G49920 Solyc06g065255.1 10 8 6 8 13 6 5 19 14 14 15 5 17 10 12 Unknown protein Solyc06g065260.3 1087 756 533 582 347 300 333 382 672 769 501 315 755 477 415 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6RP54_ACTCH) AT1G72180 Solyc06g065270.4 828 1049 984 1136 1309 1307 1258 1491 1148 1064 899 1088 876 1048 775 Adenylate kinase (AHRD V3.3 *** A0A200Q1F5_9MAGN),Pfam:PF00406 AT5G47840 Solyc06g065290.4 214 282 312 252 233 274 245 283 278 176 301 207 365 217 267 Protein phosphatase 1 regulatory subunit 11 (AHRD V3.3 *-* A0A1Y1IFT0_KLENI) AT2G31305 Solyc06g065300.4 11 14 29 28 9 13 13 8 9 6 16 6 45 13 17 Helicase (AHRD V3.3 *-* A0A200PRA7_9MAGN) Solyc06g065310.3 67 145 225 214 317 336 371 244 159 144 273 213 182 151 163 Biotin/lipoate A/B protein ligase family (AHRD V3.3 *** A0A2U1MSZ4_ARTAN) AT3G29010 Solyc06g065320.4 770 1095 769 821 1063 1154 1085 984 917 874 838 797 1015 891 850 Protein disulfide isomerase-like protein, putative (AHRD V3.3 *** A0A072VPJ1_MEDTR) Solyc06g065330.4 567 495 482 802 511 579 573 497 551 547 555 537 517 618 678 Receptor-like proteiny region, transmembrane domain-and RING domain-containing protein 2 (AHRD V3.3 *** A0A2G2WKE0_CAPBA) Solyc06g150127.1 6 34 37 62 111 128 175 68 59 26 25 20 48 29 35 Unknown protein Solyc06g065340.1 140 1164 407 1385 2566 1690 2404 2478 1220 1663 562 1151 839 1060 401 hypothetical protein (AHRD V3.3 *** AT1G22680.1) AT1G71970 Solyc06g065360.3 773 508 414 364 351 411 344 432 479 557 351 452 400 386 456 Erythroid differentiation-related factor 1-like protein (AHRD V3.3 *** Q5N730_ORYSJ) AT1G35660 Solyc06g065370.3 2544 1428 2468 2160 1582 1481 1503 1212 1723 2104 2050 1922 1971 2045 2321 Subtilisin-like protease SBT3.3 (AHRD V3.3 *** A0A1J3F5X3_NOCCA) AT1G71950 Solyc06g065380.4 3 23 27 41 49 29 47 33 37 8 18 22 12 19 32 Calcium-dependent protein kinase (AHRD V3.3 *** Q6EE27_9ROSI) AT1G35670 Solyc06g065390.4 618 1133 976 1404 1582 1226 1408 1325 1061 908 812 1170 825 1244 885 50S ribosomal protein L21, chloroplastic (AHRD V3.3 *** A0A1U8GUE9_CAPAN) AT1G35680 Solyc06g065400.3 388 376 434 355 280 379 338 342 261 339 313 262 359 397 327 SNARE associated Golgi protein (AHRD V3.3 *** A0A2U1LN83_ARTAN) AT4G09580 Solyc06g065410.3 0 7 1 2 13 14 13 16 2 13 11 4 0 2 21 NAC domain-containing protein 37 (AHRD V3.3 *** A0A2G2WKG4_CAPBA) AT1G71930 Solyc06g065420.2 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1KTH1_ARTAN) Solyc06g065430.3 1 0 0 15 0 0 0 0 0 0 0 0 3 3 50 Cytochrome P450 (AHRD V3.3 *** A0A2U1KTH1_ARTAN) Solyc06g065440.1 1116 913 1480 1656 1221 1304 1337 1058 1366 1075 1850 991 1426 1201 1965 Zinc finger protein STOP1-like protein (AHRD V3.3 *** A0A2G2ZB75_CAPAN) Solyc06g065445.1 103 64 141 216 134 144 195 88 97 71 209 94 127 125 214 Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (AHRD V3.3 *-* A0A2G3C818_CAPCH) Solyc06g065450.3 24 229 257 323 662 632 565 759 298 136 301 394 34 144 130 Forkhead-associated (FHA) domain (AHRD V3.3 *** A0A200Q0W4_9MAGN) AT1G34355 Solyc06g065460.2 1509 1145 1490 1160 1060 1137 1217 1039 1100 1281 1308 1082 1158 1070 1107 DUF668 domain-containing protein/DUF3475 domain-containing protein (AHRD V3.3 *** A0A1Q3CI27_CEPFO) AT1G34320 Solyc06g065470.4 2333 3177 3648 3378 3955 4366 4528 3325 2465 2239 2792 2883 3216 3181 2633 RNA-binding protein 8A-like (AHRD V3.3 *** A0A2I4G780_9ROSI) AT1G51510 Solyc06g065480.4 1623 1001 1199 1003 984 941 1045 729 838 1167 1243 872 871 990 1249 Protein-tyrosine-phosphatase PTP1 (AHRD V3.3 *** A0A2G3C819_CAPCH) AT1G71860 Solyc06g065490.3 85 185 240 262 502 464 525 374 219 171 294 225 125 137 209 Photosystem II reaction center PsbP family protein (AHRD V3.3 *** A0A0F7CYM1_9ROSI) AT3G56650 Solyc06g065500.4 1052 741 535 645 530 503 582 520 484 526 514 524 588 649 545 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QIV7_9MAGN) AT2G32230 Solyc06g065510.4 546 456 367 679 456 368 473 499 368 584 392 506 409 476 360 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PN78_9MAGN) AT5G11310 Solyc06g065520.3 3303 5671 3844 3707 4873 4581 4963 5210 4015 3759 3407 4347 5431 4982 4154 T-complex protein 1 subunit eta (AHRD V3.3 *** A0A2G2WKI3_CAPBA) AT3G11830 Solyc06g065530.4 24 45 39 54 99 79 58 96 59 21 91 68 44 57 6 GDSL esterase/lipase (AHRD V3.3 *** A0A314ZSH7_PRUYE) Solyc06g065540.3 1079 780 831 815 402 548 626 435 591 671 799 400 765 674 880 1-phosphatidylinositol-3-phosphate 5-kinase fab1d-like protein (AHRD V3.3 *** A0A2K3NPE5_TRIPR) AT1G34260 Solyc06g065550.2 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 Unknown protein Solyc06g065560.2 423 844 641 645 1045 1011 1012 1126 705 643 787 754 520 558 340 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A1U8GUV3_CAPAN) AT2G26640 Solyc06g065570.3 986 1788 1507 1608 1676 1703 1718 1613 1151 1429 1535 1338 3013 1855 1535 N-alpha-acetyltransferase 50 (AHRD V3.3 *** A0A1U8GUI6_CAPAN) AT5G11340 Solyc06g065580.3 1014 1335 1303 1254 1289 1655 1342 1604 1407 1544 1264 1642 1742 1435 1189 Uridine kinase (AHRD V3.3 *** K4C7I7_SOLLC) AT5G40870 Solyc06g065590.4 6133 11587 10502 8606 11681 11515 11730 11918 7455 5739 8055 8333 12442 11560 9427 60S ribosomal protein L18a (AHRD V3.3 *** A0A2G2WKJ7_CAPBA) AT3G14600 Solyc06g065600.1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** K4C7I9_SOLLC) AT3G08770 Solyc06g065610.3 521 1187 980 938 1012 1226 1344 993 737 635 872 722 1030 963 646 Protein phosphatase 2C (AHRD V3.3 *** Q8S8Z1_MESCR) AT2G25620 Solyc06g065620.2 37 47 66 111 112 134 153 120 80 61 76 102 68 94 84 Type 2 dna topoisomerase 6 subunit b-like protein (AHRD V3.3 *** A0A314LA60_NICAT) AT1G60460 Solyc06g065630.3 120 215 307 292 193 260 163 239 128 170 180 296 131 247 159 flavin monooxygenase AT5G11320 Solyc06g065640.3 6483 5935 4577 5003 6537 6494 6937 7087 5631 5290 4432 5468 5650 5786 4405 Transcriptional corepressor LEUNIG (AHRD V3.3 *** A0A2G2WKG2_CAPBA) AT4G32551 Solyc06g065650.3 738 1396 1274 1304 2258 2089 2337 2278 1185 1001 1320 1543 928 1054 784 Tify domain-containing protein (AHRD V3.3 *** A0A1Q3C435_CEPFO) AT4G32570 Solyc06g065660.1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *** Q8LCP0_ARATH) Solyc06g065670.4 146 173 268 192 12 56 59 30 144 86 256 106 133 94 223 Pleiotropic drug resistance protein 4 (AHRD V3.3 *** A0A2G2WKR5_CAPBA) Solyc06g065680.3 1568 1826 2582 3304 3426 3820 3414 3137 2121 2513 3193 2951 847 1574 1480 cyclin A2 AT1G80370 Solyc06g065690.3 2540 3553 3510 5045 5103 4806 4577 5280 3509 4290 3496 4114 3057 3408 2825 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *** A0A2G2WKL6_CAPBA) AT5G25510 Solyc06g065700.3 2841 1924 1777 1934 1594 1662 1761 1670 1663 1659 1571 1733 1750 2011 1753 WD40 repeat (AHRD V3.3 *** A0A200QHW0_9MAGN) AT5G25150 Solyc06g065710.3 8366 7897 5420 4927 6117 5796 5648 6926 6693 5369 5559 6203 7770 7198 6172 Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *-* A0A2K3PKD0_TRIPR) AT4G31880 Solyc06g065720.1 224 313 352 299 256 296 274 301 361 274 239 267 416 352 323 Cytochrome, and DOMON domain-containing protein (AHRD V3.3 *** A0A2G2WKK0_CAPBA) AT5G54830 Solyc06g065730.3 1681 1983 1740 1882 1847 2299 2101 2154 2065 1878 1780 1720 1689 1910 1841 CHD3-type chromatin-remodeling factor PICKLE (AHRD V3.3 *** A0A2G2ZAQ4_CAPAN) AT2G25170 Solyc06g065740.4 290 341 352 311 334 344 379 315 303 311 355 276 402 346 279 Golgi SNAP receptor complex member 1 (AHRD V3.3 *** A0A2G3C7X3_CAPCH) AT1G15880 Solyc06g065750.1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *** Q8LCP0_ARATH) Solyc06g065760.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g065790.1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *** Q8LCP0_ARATH) Solyc06g065800.3 153 326 270 186 191 183 222 225 219 190 211 218 328 348 143 Mitochondrial glycoprotein (AHRD V3.3 *** A0A200PPZ5_9MAGN) AT4G31930 Solyc06g065820.3 9 97 271 141 42 67 77 68 76 79 138 52 18 31 125 Ethylene Response Factor H.1 AT5G25190 Solyc06g150128.1 255 260 303 292 234 237 263 220 221 201 140 160 270 290 258 hypothetical protein (AHRD V3.3 *** AT4G39235.2) AT4G39235 Solyc06g065830.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G2WKJ8_CAPBA) Solyc06g065840.3 832 1008 1040 1034 975 1064 1190 1126 1162 1042 937 903 1027 1213 1094 Trafficking protein particle complex II-specific subunit-like protein (AHRD V3.3 *** A0A2G3C800_CAPCH) AT5G11040 Solyc06g065850.3 11 17 44 8 26 17 19 8 18 19 51 34 12 8 28 Flotillin-like protein (AHRD V3.3 *** A0A2K3NEM2_TRIPR) AT5G25250 Solyc06g065870.3 21 237 268 141 254 254 234 300 300 322 401 340 203 171 227 envelope glycoprotein B (AHRD V3.3 *** AT1G80540.1) AT2G12400 Solyc06g065880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome C biogenesis Fn protein (AHRD V3.3 *-* A0A072TGA7_MEDTR) Solyc06g065900.4 380 316 955 581 534 483 488 393 639 671 931 560 447 391 611 Serine-rich protein (AHRD V3.3 *** Q8L8M8_ARATH) Solyc06g065910.3 1 2 13 0 0 2 1 0 3 2 2 0 0 0 0 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** A0A1R7T3E1_ARATH) AT2G25290 Solyc06g065920.4 119 162 198 211 161 237 175 176 192 137 126 153 175 210 265 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1PJM7_ARTAN) AT3G17090 Solyc06g065930.4 2 3 3 2 0 9 4 3 2 0 1 0 0 2 0 ER membrane protein complex subunit 7-like protein (AHRD V3.3 *** A0A2G3C7T0_CAPCH) Solyc06g065940.4 344 196 233 168 172 221 191 106 130 128 264 179 212 245 368 protein FAR1-RELATED SEQUENCE 6-like (AHRD V3.3 *** A0A2I4ES98_9ROSI) Solyc06g065950.4 648 580 762 629 629 732 664 659 672 585 922 569 568 609 782 Vesicle-associated membrane protein (AHRD V3.3 *** A0A1U8GUV8_CAPAN) AT4G32150 Solyc06g065960.1 4 8 6 2 6 6 13 6 6 2 11 5 0 2 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc06g065970.1 484 3382 1606 3255 8278 5996 6363 7739 1780 2548 985 1572 812 754 367 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc06g065980.3 1065 1992 1931 1551 2358 2171 2160 2164 1836 1207 1820 1932 2133 2161 1369 DNA/RNA-binding protein Alba-like (AHRD V3.3 *** A0A200QVB2_9MAGN) Solyc06g065990.1 557 957 923 1989 2090 1476 1362 2221 1120 2024 906 1556 714 609 788 ATP synthase subunit b', chloroplastic (AHRD V3.3 *** A0A1U8GUM8_CAPAN) AT4G32260 Solyc06g066000.3 5751 5475 4557 5749 6383 4191 4279 7062 4854 7703 3799 6052 3411 3472 4698 ATP synthase subunit b', chloroplastic (AHRD V3.3 *** A0A1U8GUM8_CAPAN) AT4G32260 Solyc06g066010.3 114 228 246 225 258 263 263 187 294 116 330 150 323 266 458 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like (AHRD V3.3 *** A0A2I4E0F9_9ROSI) AT4G32270 Solyc06g066020.3 28 66 122 70 95 55 49 49 144 26 115 45 47 105 106 auxin-regulated IAA36 AT4G32280 Solyc06g066030.4 2570 4382 3988 4275 5577 5520 5687 5744 5017 3490 4380 4297 3627 4030 4107 Protein WVD2-like 1 (AHRD V3.3 *** A0A2G3C7U3_CAPCH) AT4G32330 Solyc06g066040.2 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 Unknown protein Solyc06g066050.3 257 234 251 296 287 307 227 276 230 333 309 186 255 205 344 DUF4050 domain-containing protein (AHRD V3.3 *** A0A1Q3CKJ2_CEPFO) AT5G25360 Solyc06g066060.3 3163 4583 3163 3134 4060 4074 3649 4458 3750 3074 2533 3263 5064 4338 3086 CGI-144 Solyc06g066065.1 3 13 19 20 11 29 14 7 7 3 9 5 22 42 33 Unknown protein Solyc06g066070.1 3 4 0 5 14 10 23 4 12 3 3 12 9 3 27 Nucleotide-sugar transporter family protein (AHRD V3.3 *** A0A2U1NGQ1_ARTAN) Solyc06g066080.1 48 71 72 71 60 67 67 78 54 24 41 51 70 73 53 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QS26_9MAGN) Solyc06g066090.3 305 268 324 398 385 374 396 360 472 322 317 348 410 351 382 AFG1-like ATPase family protein (AHRD V3.3 *** A0A2U1LH52_ARTAN) AT2G25530 Solyc06g066100.3 776 1525 1914 1480 2304 2089 2024 1990 1677 1116 1653 1815 1754 1759 1299 DNA/RNA-binding protein Alba-like (AHRD V3.3 *** A0A200QVB2_9MAGN) Solyc06g066110.1 1 4 1 4 11 14 3 9 8 1 0 3 7 1 0 DUF1677 family protein (DUF1677) (AHRD V3.3 *** Q9SK23_ARATH) Solyc06g066120.3 2 0 0 1 1 4 0 1 1 2 0 0 4 0 2 Endoglucanase (AHRD V3.3 *** A0A200QIT4_9MAGN) AT3G43860 Solyc06g066130.1 15 13 16 20 74 102 76 87 34 49 27 93 13 14 20 Mitogen-activated protein kinase kinase kinase 21 (AHRD V3.3 *-* Q6K1M3_ARATH) Solyc06g066140.3 5 0 7 8 2 5 1 1 5 1 0 7 0 6 0 Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *-* A0A2U1PW86_ARTAN) Solyc06g066160.3 0 4 0 11 13 15 25 15 1 1 18 0 0 3 14 Isoflavone reductase (AHRD V3.3 *** A0A2I0X1T0_9ASPA) AT1G32100 Solyc06g066180.4 4 38 23 32 18 16 16 5 15 17 34 10 10 13 69 Myb family transcription factor APL (AHRD V3.3 *** A0A1U8GUR4_CAPAN) Solyc06g066190.3 918 1278 995 2377 1564 1103 1656 1816 909 1969 1096 1629 1395 1543 1043 50S ribosomal protein L35 (AHRD V3.3 *** A0A200R6W9_9MAGN) AT5G45590 Solyc06g066200.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* B3H578_ARATH) Solyc06g066210.1 0 0 2 0 0 1 0 1 0 0 0 2 0 1 0 Unknown protein Solyc06g066220.1 0 5 12 3 0 3 2 3 1 3 8 0 2 0 0 Unknown protein Solyc06g066230.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome 71D7 (AHRD V3.3 *** A0A2G3C7P6_CAPCH) Solyc06g066240.4 7 93 37 15 70 102 98 93 103 111 59 77 88 38 2 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc06g066245.1 0 0 0 0 11 4 4 0 0 0 0 4 0 0 0 Unknown protein Solyc06g084820.2 158 148 40 97 29 30 30 17 91 109 76 41 112 75 118 Cytochrome P450 (AHRD V3.3 *** A0A200PMP4_9MAGN) Solyc06g084825.1 0 8 5 8 1 7 5 2 1 3 2 0 4 4 1 Cytochrome P450 (AHRD V3.3 *-* A0A200PMQ1_9MAGN) Solyc06g066270.1 24 4 4 2 0 3 2 1 4 3 4 2 6 10 0 Cytochrome P450 (AHRD V3.3 *-* A0A200PMQ1_9MAGN) Solyc06g066290.3 17 9 30 33 5 25 13 4 13 51 48 3 4 17 30 cystic fibrosis transmembrane conductance regulator (AHRD V3.3 *** AT2G35585.1) AT1G31940 Solyc06g066300.1 1033 1019 718 803 801 749 677 788 676 920 648 787 863 897 720 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 (AHRD V3.3 *** A0A2G3C7T2_CAPCH) AT5G62030 Solyc06g066310.3 209 361 286 406 442 478 504 348 264 272 283 267 424 407 368 Phosphomevalonate kinase (AHRD V3.3 *** A0A2L0V4K1_9APIA) AT1G31910 Solyc06g066320.3 3284 3071 3140 2946 2731 3006 2897 2874 3015 2519 3165 2667 3075 3559 3565 Transcription factor IIS (AHRD V3.3 *** A0A200R1D0_9MAGN) AT1G32130 Solyc06g066330.3 1695 727 853 730 529 556 628 454 583 530 692 500 807 715 629 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A200PXE3_9MAGN) Solyc06g066340.4 2271 2018 2205 2396 2830 2638 2144 2419 2113 1844 3811 2240 1528 1912 2127 Homeodomain-like superfamily protein (AHRD V3.3 *-* A0A2U1QD82_ARTAN) AT1G32240 Solyc06g066345.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) ATMG00240 Solyc06g066360.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* F4KE59_ARATH) Solyc06g066370.4 2548 1020 1790 745 72 118 124 108 786 1078 4283 797 972 949 1706 WRKY transcription factor 31 AT2G38470 Solyc06g066380.1 319 329 423 258 158 202 208 214 215 226 573 312 370 310 359 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PTN3_9MAGN) Solyc06g066390.3 7 2 9 2 2 3 1 2 1 1 3 3 9 6 9 AP2-like ethylene-responsive transcription factor BBM2 (AHRD V3.3 *** A0A1U8H0S8_CAPAN) Solyc06g066400.3 18 47 138 100 171 112 125 86 69 70 91 63 43 83 96 Dolichol phosphate-mannose biosynthesis regulatory protein (AHRD V3.3 *** A0A2G3C7S3_CAPCH) AT1G74340 Solyc06g066410.3 2 2 2 1 0 0 0 1 0 0 16 0 0 0 0 Profilin (AHRD V3.3 *** A0A1U8H559_CAPAN) AT2G19770 Solyc06g066420.4 417 25 55 11 0 0 0 0 22 163 91 16 8 15 87 Oxidative stress 3 (AHRD V3.3 *-* A0A2K3PRT1_TRIPR) AT5G56550 Solyc06g066430.3 629 763 744 836 1558 1445 1406 1514 695 550 637 1136 561 702 495 SUN-like protein 18 AT3G16490 Solyc06g066440.3 252 428 265 285 455 442 466 467 474 343 259 420 426 466 342 hexokinase 2 Solyc06g066460.3 879 310 492 316 176 155 171 141 237 324 421 198 202 347 351 Nuclear poly(A) polymerase 4 (AHRD V3.3 *-* A0A2G2ZBI7_CAPAN) Solyc06g066470.4 1418 581 326 445 196 188 247 305 488 788 336 466 317 544 326 Poly(A) polymerase (AHRD V3.3 *** A0A2U1LQ18_ARTAN) Solyc06g066475.1 0 0 11 0 0 1 4 0 0 0 0 1 0 2 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2G3D1E5_CAPCH) Solyc06g066480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g066490.1 67 55 64 53 22 28 17 12 36 35 77 31 46 26 31 Avr9/Cf-9 rapidly elicited protein 146 (AHRD V3.3 *** Q9FQZ6_TOBAC) Solyc06g066500.1 434 209 186 256 253 207 203 142 168 263 322 148 207 124 184 Avr9/Cf-9 rapidly elicited protein 146 (AHRD V3.3 *** Q9FQZ6_TOBAC) Solyc06g066510.1 14 5 5 7 1 0 1 4 3 7 9 0 0 12 16 Avr9/Cf-9 rapidly elicited protein 146 (AHRD V3.3 *-* Q9FQZ6_TOBAC) Solyc06g066520.1 121 81 269 128 61 64 25 25 93 101 224 76 74 100 111 Avr9/Cf-9 rapidly elicited protein 146 (AHRD V3.3 *** Q9FQZ6_TOBAC) Solyc06g066530.1 2 0 0 2 0 0 0 0 2 0 0 0 1 0 0 DUF1677 domain-containing protein (AHRD V3.3 *** A0A1Q3DB84_CEPFO) AT5G25840 Solyc06g066540.1 251 111 183 180 49 37 40 21 321 342 318 130 115 191 876 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2XMU8_CAPBA) Solyc06g066550.3 710 370 630 425 471 515 535 455 427 683 698 534 282 438 725 LETM1-like protein (AHRD V3.3 *** A0A2U1PU88_ARTAN) Solyc06g066560.3 1 0 0 2 0 0 1 0 10 0 35 0 0 1 1 tonoplast intrinsic protein 2.5 AT3G16240 Solyc06g066570.4 2825 1687 1722 1596 1195 1077 1006 1125 1350 1947 1333 1547 1515 1341 1548 Peroxisome biogenesis protein 2 (AHRD V3.3 *** A0A1U8H5I6_CAPAN) AT1G79810 Solyc06g066580.4 426 468 677 569 727 717 773 599 679 440 708 486 477 457 507 bHLH transcription factor137 Solyc06g066590.4 21 8 6 9 6 3 5 5 22 13 7 10 5 21 22 Protein PLANT CADMIUM RESISTANCE 8 (AHRD V3.3 *** A0A2G2WLP0_CAPBA) AT1G52200 Solyc06g066600.3 513 450 710 712 537 616 573 362 466 557 593 457 478 588 858 plastidic glucose translocator 2 AT1G79820 Solyc06g066610.4 967 1371 1060 980 1071 984 1154 1253 1614 1034 1072 1047 1376 1400 1336 Golgin candidate 5 (AHRD V3.3 *** A0A2G2WLI4_CAPBA) AT1G79830 Solyc06g066620.4 1343 1985 1549 2091 2913 2698 2857 3167 2002 2603 1885 2402 1273 1576 1414 Protein CURVATURE THYLAKOID 1C, chloroplastic (AHRD V3.3 *** A0A2G2WLI3_CAPBA) AT1G52220 Solyc06g066630.1 81 346 252 234 474 420 308 520 228 334 328 392 270 233 80 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1LYZ9_ARTAN) Solyc06g066640.3 215 570 673 628 1463 1381 1566 1233 801 667 572 685 331 430 610 Photosystem I reaction center subunit VI, chloroplastic (AHRD V3.3 *** A0A2G2WLH8_CAPBA) AT3G16140 Solyc06g066650.4 234 143 194 142 158 181 212 111 115 152 153 109 115 120 211 Rop guanine nucleotide exchange factor 12 (AHRD V3.3 *** A0A1U8HDV5_CAPAN) AT1G79860 Solyc06g066660.4 3117 5142 5269 3591 4491 4668 4553 3809 2803 2559 4429 3181 5807 4770 5148 Ribosomal protein L37 (AHRD V3.3 *** A0A2G2VAP4_CAPBA) AT3G16080 Solyc06g066670.4 104 319 274 330 394 513 454 362 306 173 336 288 219 396 180 RNA helicase DEAH-box20 AT1G79890 Solyc06g066680.3 17 36 22 32 20 13 7 9 3 23 10 11 82 29 26 Mitochondrial carrier protein (AHRD V3.3 *** A0A200PP03_9MAGN) AT1G79900 Solyc06g066690.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *** Q8L402_ARATH) Solyc06g066700.1 1 0 0 1 0 2 4 4 4 0 10 3 0 0 0 serine-rich protein-like protein (AHRD V3.3 --* AT3G13227.1) AT1G52342 Solyc06g066710.1 13 26 27 25 43 35 26 24 62 7 4 23 18 24 38 hypothetical protein (AHRD V3.3 --* AT2G25735.1) Solyc06g066730.3 392 1402 958 1184 1511 1452 1585 1554 1505 822 1088 882 1023 1163 1100 Coatomer subunit beta' (AHRD V3.3 *** A0A2U1PZP9_ARTAN) AT1G52360 Solyc06g066740.3 637 698 803 660 752 684 657 630 631 651 696 695 777 815 746 Nuclear pore complex protein NUP50A (AHRD V3.3 *** A0A2G3C8N3_CAPCH) AT1G52380 Solyc06g066750.3 2 291 112 259 864 812 865 748 40 56 66 140 48 142 46 To encode a PR protein, Belongs to the plant thionin family with the following members:, putative (AHRD V3.3 *** A0A061GH02_THECC) AT1G12663 Solyc06g066760.3 617 216 249 286 193 210 171 216 237 399 192 211 196 222 232 Dual specificity phosphatase (AHRD V3.3 *** A0A200Q2H3_9MAGN) AT2G35680 Solyc06g066770.1 157 100 140 121 79 77 75 60 76 94 321 65 176 105 170 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1J3DG12_NOCCA) AT1G80440 Solyc06g066780.3 397 508 556 466 501 545 574 505 491 452 493 523 620 573 581 DNA repair protein XRCC1 (AHRD V3.3 *** A0A2G2VAW6_CAPBA) AT1G80420 Solyc06g066790.3 1531 1759 1270 1371 1390 1327 1343 1422 1498 1348 875 1339 2109 1819 1504 N-alpha-acetyltransferase 15, NatA auxiliary subunit-like (AHRD V3.3 *** A0A2I4GME8_9ROSI) AT1G80410 Solyc06g066800.2 111 349 729 257 296 323 289 295 425 379 1093 320 303 157 380 Nucleotide-diphospho-sugar transferases superfamily protein (AHRD V3.3 *** AT1G64980.3) AT1G64980 Solyc06g066810.3 428 724 869 741 902 1154 1123 941 1023 712 654 907 891 916 648 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** A0A1U8HDY3_CAPAN) AT1G80350 Solyc06g066820.4 2 0 8 1 35 32 82 36 15 15 22 10 5 5 5 Le3OH-13b-hydroxylase AT1G80340 Solyc06g066830.4 0 0 0 0 17 5 16 8 0 0 1 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) AT1G52820 Solyc06g066840.3 23 87 78 53 520 593 541 628 177 36 50 67 96 94 18 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) AT1G52820 Solyc06g066850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A2K3KWP2_TRIPR) Solyc06g066853.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L2B9_TRIPR) Solyc06g066857.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g066860.2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) Solyc06g067860.3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXB2_ARTAN) AT1G52800 Solyc06g067870.3 0 0 0 1 1 0 6 3 0 0 1 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXB2_ARTAN) Solyc06g067880.3 824 1055 1368 1637 1548 1718 1801 1308 1037 1059 1568 1265 1123 1129 1276 V-ATPase proteolipid subunit (AHRD V3.3 *** A0A200Q0M0_9MAGN) AT2G25610 Solyc06g067890.3 675 1182 1366 1540 1597 1770 2049 1756 1067 1498 1044 1595 921 1055 481 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NI49_ARTAN) AT1G15490 Solyc06g067900.3 1 15 2 12 14 19 14 14 16 3 0 4 9 6 4 HCO3-transporter family (AHRD V3.3 *-* A0A2U1LER8_ARTAN) Solyc06g067910.3 124 346 203 173 153 92 119 104 492 549 575 116 135 499 442 DUF642 domain-containing protein (AHRD V3.3 *** A0A1Q3BMB3_CEPFO) Solyc06g067920.3 541 737 573 546 638 590 648 617 518 694 514 499 808 680 456 Cytochrome c1 (AHRD V3.3 *** A0A200Q1S0_9MAGN) Solyc06g067930.2 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200PQL3_9MAGN) Solyc06g067940.4 1483 2690 2310 2089 2674 2466 2766 2805 1732 1670 1988 1867 2716 2240 2206 Cytochrome c oxidase subunit 5b-1, mitochondrial (AHRD V3.3 *** A0A2G3C921_CAPCH) AT3G15640 Solyc06g067950.3 215 650 509 529 662 631 719 555 606 247 474 299 655 680 1312 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1Q9V2_ARTAN) AT1G52700 Solyc06g067960.3 400 668 714 657 855 690 744 828 798 585 540 771 991 857 593 Glutaredoxin (AHRD V3.3 *** A0A200RBL6_9MAGN) AT3G15660 Solyc06g067970.3 318 270 258 233 278 275 263 245 260 274 210 257 221 287 482 DUF1644 domain-containing protein (AHRD V3.3 *-* A0A1Q3BXX3_CEPFO) Solyc06g067980.3 185 32 123 128 22 40 26 34 92 144 140 128 20 464 2000 repressed By RIM101 protein 1 (AHRD V3.3 --* XP_011091441.1) Solyc06g067990.3 1128 1212 903 913 1034 1127 961 1110 908 1023 817 1075 1245 1024 814 Lys-63-specific deubiquitinase BRCC36 (AHRD V3.3 *** A0A2G3C915_CAPCH) AT3G06820 Solyc06g068000.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g068010.3 528 533 693 506 712 590 708 585 565 427 539 491 466 546 440 Biotin carboxyl carrier protein of acetyl-CoA carboxylase (AHRD V3.3 *** A0A1J3F9E7_NOCCA) AT1G52670 Solyc06g068020.1 0 0 0 0 0 1 3 0 0 0 0 0 4 1 0 hypothetical protein (AHRD V3.3 *** AT1G15400.1) Solyc06g068030.3 535 414 606 607 540 650 671 505 448 442 628 445 417 472 607 Trafficking protein particle complex subunit 2 (AHRD V3.3 *** A0A2U1Q9U5_ARTAN) AT1G80500 Solyc06g068040.3 108 32 116 222 1 1 1 1 53 48 39 7 56 54 48 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1NJW4_ARTAN) AT1G80170 Solyc06g068050.3 490 302 283 271 142 206 215 105 149 144 240 147 432 295 319 DNA/RNA-binding protein Alba-like (AHRD V3.3 *** A0A200PQE1_9MAGN) AT1G29250 Solyc06g068055.1 1042 791 803 815 637 534 620 667 1016 625 750 780 928 1126 1144 Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *** A0A2K3PKD0_TRIPR) Solyc06g068070.2 0 2 0 2 4 0 1 0 1 0 14 0 1 2 0 Unknown protein Solyc06g068080.4 289 327 481 551 501 608 591 466 296 417 486 458 422 362 427 SNARE-like superfamily protein (AHRD V3.3 *** A0A2U1KJN4_ARTAN) AT1G15370 Solyc06g068090.3 1962 2449 2700 2323 2111 2129 2060 2431 3296 2837 2772 2426 2516 2671 3142 phospholipase PLDa1 AT1G52570 Solyc06g068100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A2G2WL18_CAPBA) Solyc06g068110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cytochrome P450 family protein (AHRD V3.3 *** AT3G15760.1) AT1G52565 Solyc06g068120.4 107 128 192 196 268 230 273 230 195 173 219 240 167 162 167 DUF4050 family protein (AHRD V3.3 *** Q8L920_ARATH) Solyc06g068130.3 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* F4K464_ARATH) Solyc06g068140.3 5400 2793 2712 2069 2988 2768 2810 3204 4333 3684 4134 3655 2719 2765 3256 Methyl-CpG-binding domain-containing protein 11 (AHRD V3.3 *** A0A2G2ZBW5_CAPAN) AT1G15340 Solyc06g068150.3 26 5 13 12 21 13 11 15 4 10 0 4 0 11 37 Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1 (AHRD V3.3 *** A0A2G2WL95_CAPBA) AT3G15820 Solyc06g068160.3 6073 451 172 171 45 66 49 44 95 273 234 98 157 321 816 SNF4 AT1G15330 Solyc06g068165.1 0 0 2 0 6 3 3 7 2 0 0 3 0 1 0 Unknown protein Solyc06g068170.2 15 37 69 37 117 155 82 110 43 8 57 67 7 25 25 U11/U12 small nuclear ribonucleoprotein 25 kDa protein (AHRD V3.3 *** A0A1J3EP87_NOCCA) Solyc06g068180.3 33 9 9 17 9 15 4 3 4 18 12 16 5 13 9 Ubiquitin system component Cue protein (AHRD V3.3 --* AT5G32440.3) Solyc06g068190.2 26 2 18 10 0 1 1 4 3 5 15 6 4 3 13 Ubiquitin system component Cue (AHRD V3.3 *-* A0A200QTD9_9MAGN) Solyc06g068200.1 26 52 41 44 25 33 43 39 25 24 24 19 42 37 85 protein FAR1-RELATED SEQUENCE 6-like (AHRD V3.3 *** A0A2I4DIH0_9ROSI) Solyc06g068210.3 300 193 156 172 151 197 205 198 220 229 262 167 183 262 302 Protein FAR1-RELATED SEQUENCE 8 (AHRD V3.3 *** A0A2G3C918_CAPCH) AT1G80010 Solyc06g150129.1 8 20 4 12 4 5 8 5 9 16 13 17 15 9 9 Unknown protein Solyc06g068220.3 2735 1397 1106 1333 1586 1765 1809 1474 1140 1555 1048 1103 795 846 1652 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q8VZ57_ARATH) AT1G52510 Solyc06g068230.4 1626 2982 1698 2858 4372 4546 4632 4573 3618 2074 1916 2207 1983 2325 2790 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1MYN5_ARTAN) AT1G15290 Solyc06g068240.3 136 1211 938 996 1239 1361 1573 1378 812 617 605 1173 716 1114 490 Pyrophosphate-energized vacuolar membrane proton pump (AHRD V3.3 *** A0A2G3C949_CAPCH) AT1G15690 Solyc06g068250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A1P8ARH4_ARATH) Solyc06g068260.3 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* Q9XIA5_ARATH) Solyc06g068270.3 349 82 35 21 2 3 18 6 46 37 33 11 75 54 10 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9XIA5_ARATH) Solyc06g068280.3 809 696 706 595 545 668 569 585 889 801 652 721 627 759 753 RNA helicase DEAD20 AT5G51280 Solyc06g068290.1 153 439 368 571 591 509 567 502 361 353 413 531 416 583 350 Triphosphate tunel metalloenzyme 3 (AHRD V3.3 *** A0A1U8HDG2_CAPAN) AT2G11890 Solyc06g068295.1 0 2 8 0 0 6 0 1 2 0 0 1 1 0 0 Unknown protein Solyc06g068310.1 11 122 149 166 214 234 193 229 194 64 121 144 213 358 261 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 *** Q9M8M0_ARATH) AT1G80520 Solyc06g068320.3 1628 3090 2059 1784 2585 2508 2387 2868 2382 1960 1906 2052 3378 2779 1972 Proline-tRNA ligase (AHRD V3.3 *** X8JBM9_9HOMO) AT3G62120 Solyc06g068330.1 91 104 52 119 28 40 42 32 89 145 127 103 90 73 61 Serine-rich protein (AHRD V3.3 *-* Q8L8M8_ARATH) AT5G25280 Solyc06g068340.3 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 DUF247 domain-containing protein (AHRD V3.3 *** A0A1Q3BSN5_CEPFO) AT3G02645 Solyc06g068350.2 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 Unknown protein Solyc06g068360.3 121 177 393 214 272 280 174 154 596 117 466 193 360 476 775 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2WLG1_CAPBA) Solyc06g068370.3 111 57 126 111 117 84 77 60 108 89 91 136 47 91 99 Unknown protein Solyc06g068380.4 1120 1389 2263 2743 1932 1776 1788 1709 1555 1966 3177 1713 1748 1739 2743 PPPDE thiol peptidase family protein (AHRD V3.3 *-* O49393_ARATH) AT1G80690 Solyc06g068390.1 109 70 145 144 43 16 23 30 93 164 242 103 88 110 339 Zinc finger protein 4 (AHRD V3.3 *** A0A2G3C958_CAPCH) Solyc06g068400.3 505 1020 821 683 816 845 800 702 689 424 824 642 1156 969 850 60S ribosomal protein L7-like protein (AHRD V3.3 *** B3TM16_ELAGV) AT1G80750 Solyc06g068410.3 722 543 535 783 493 588 556 581 628 793 588 643 572 662 748 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** F4HU15_ARATH) Solyc06g068420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *-* AT4G35070.2) Solyc06g068430.4 356 209 144 133 37 58 30 27 90 112 130 58 167 261 370 Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *-* A0A2K3P6L1_TRIPR) Solyc06g068440.4 444 465 290 551 371 304 327 332 550 367 313 231 436 463 847 cinnamoyl-CoA reductase AT1G15950 Solyc06g068450.3 1115 336 60 294 58 55 55 51 240 331 170 82 204 432 1045 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2WLA4_CAPBA) AT5G25110 Solyc06g068460.3 2817 1564 3518 858 94 106 157 78 814 1158 8109 1081 608 821 1825 WRKY transcription factor 40 AT1G80840 Solyc06g068470.3 43 86 63 86 87 92 89 73 55 49 96 64 74 57 104 Phosphatidyl-N-methylethanolamine N-methyltransferase (AHRD V3.3 *** A0A2G2ZC28_CAPAN) AT1G80860 Solyc06g068480.3 457 582 784 737 747 628 747 684 728 678 623 624 505 587 571 Protein LOW PSII ACCUMULATION 3, chloroplastic (AHRD V3.3 *** A0A1U8H521_CAPAN) AT1G73060 Solyc06g068490.3 948 535 522 623 468 479 496 384 546 637 708 455 380 518 651 Magnesium transporter MRS2-B (AHRD V3.3 *** A0A2G2WL88_CAPBA) AT1G16010 Solyc06g068500.3 1788 537 478 399 103 69 89 77 383 1063 541 272 195 456 1106 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G2WQF7_CAPBA) AT1G80920 Solyc06g068510.1 42 38 43 32 9 38 35 15 42 26 43 27 42 65 52 MAP kinase kinase kinase 38 Solyc06g068520.3 52 61 27 171 7 2 0 0 4 15 76 5 14 38 501 Hydroxyproline-rich systemin (AHRD V3.3 *** HSY1_SOLLC) Solyc06g068530.1 10 3 7 5 0 0 0 0 0 2 3 0 3 20 38 Unknown protein Solyc06g068540.3 872 460 323 365 223 198 202 234 556 1111 595 493 823 544 383 ATP-dependent DNA helicase (AHRD V3.3 *** Q9ZUI1_ARATH) AT4G30780 Solyc06g068550.4 40 188 101 171 437 391 376 368 233 110 158 195 87 171 43 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1P524_ARTAN) AT1G79720 Solyc06g068560.3 290 233 210 202 162 225 160 162 153 254 191 179 251 234 188 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AUY7_ARATH) AT1G79710 Solyc06g068570.4 130 74 11 16 14 20 22 1 12 75 51 6 15 13 28 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2ZC69_CAPAN) Solyc06g068580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein (AHRD V3.3 *-* A0A2K3MZH6_TRIPR) Solyc06g068590.4 2 22 26 52 18 24 26 20 17 14 16 23 24 22 55 Serine/threonine-protein kinase fray2 (AHRD V3.3 *** A0A2G2ZC59_CAPAN) Solyc06g068600.3 104 74 66 46 63 81 79 33 62 77 108 40 55 121 169 Phosphate ABC transporter ATP-binding protein PstB (AHRD V3.3 *** A0A365XJ19_9ACTN) AT1G67940 Solyc06g068605.1 75 66 143 49 85 114 95 48 73 35 115 71 88 72 205 Unknown protein Solyc06g068610.3 158 183 193 200 201 290 269 210 240 160 218 178 225 198 154 Transcriptional regulator of RNA polII, SAGA, subunit (AHRD V3.3 *** Q58G10_ARATH) AT2G24530 Solyc06g068620.3 3487 2185 2526 6936 2471 2546 2819 1401 3352 5535 3422 5966 4672 5130 16794 elongation factor (AHRD V3.3 *-* AT5G43150.1) Solyc06g068630.4 145 106 81 110 94 89 88 92 106 101 54 101 96 122 118 F-box protein (AHRD V3.3 *** A0A2G3DAV0_CAPCH) Solyc06g068640.3 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8H0T0_CAPAN) Solyc06g068650.4 318 1170 435 634 1553 1383 1384 1226 861 1845 666 828 930 717 371 4-coumarate:CoA ligase (AHRD V3.3 *** Q42879_LITER) AT3G21240 Solyc06g068660.3 14 0 0 0 2 0 0 0 0 3 0 0 0 0 1 F-box/RNI superfamily protein (AHRD V3.3 *** AT1G73120.1) AT1G73120 Solyc06g068670.3 733 929 1027 1120 1208 1191 1322 1103 1322 1164 1290 1250 872 931 1201 ACT domain-containing protein (AHRD V3.3 *** A0A2U1QDU0_ARTAN) AT1G16880 Solyc06g068680.3 210 123 136 149 36 26 45 35 77 72 205 17 94 117 217 Respiratory burst oxidase homolog (AHRD V3.3 *** Q84KK7_NICBE) Solyc06g068690.4 202 196 442 363 769 772 822 664 179 164 345 158 122 126 396 Amidase family protein (AHRD V3.3 *-* AT5G07360.3) Solyc06g068700.4 14 78 24 38 88 97 80 78 71 27 66 58 92 78 102 Calreticulin/calnexin (AHRD V3.3 *** A0A200R3N5_9MAGN) AT5G61790 Solyc06g068710.3 284 680 470 339 611 508 554 489 325 253 310 474 842 667 310 40S ribosomal protein S27 (AHRD V3.3 *** A0A2G2WLL6_CAPBA) Solyc06g068720.3 440 555 519 474 707 704 648 660 600 468 416 537 588 609 552 Mitochondrial substrate carrier family protein (AHRD V3.3 *** F4KBU1_ARATH) AT5G51050 Solyc06g068730.1 15 1 0 0 0 1 0 0 0 0 0 1 0 1 6 Stress up-regulated Nod 19 (AHRD V3.3 *** A0A200R3S5_9MAGN) AT5G61820 Solyc06g068740.4 535 379 550 440 371 420 364 300 441 423 546 383 431 497 820 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1MGW3_ARTAN) AT5G61830 Solyc06g068750.3 287 376 407 376 448 487 425 446 290 323 380 250 290 281 510 Transferring glycosyl group transferase (AHRD V3.3 *** A0A2K3L539_TRIPR) Solyc06g068760.3 2025 1413 1338 1532 1644 1733 1663 1353 1250 1421 1305 1220 1363 1314 1523 Chromophore lyase CRL, chloroplastic (AHRD V3.3 *** A0A1U8H4X1_CAPAN) AT5G51020 Solyc06g068770.3 254 504 642 587 588 596 539 673 818 695 527 876 324 537 460 DB279 AT5G61840 Solyc06g068780.3 464 481 662 603 687 764 753 537 410 390 488 535 551 592 588 Protein kish (AHRD V3.3 *** A0A2G2XZR9_CAPAN) AT5G20165 Solyc06g068790.4 12 19 17 6 6 20 11 16 11 5 10 15 8 4 18 Unknown protein Solyc06g068800.3 995 965 768 906 702 755 638 596 682 699 666 652 1061 978 1085 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1PFN3_ARTAN) AT1G01630 Solyc06g068810.4 23 60 86 41 45 93 75 82 65 72 47 61 53 61 37 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3C962_CAPCH) AT5G50990 Solyc06g068815.1 6 3 8 13 3 9 5 4 12 8 5 4 1 9 10 Unknown protein Solyc06g068820.3 156 203 226 210 167 199 186 115 185 107 214 168 270 233 230 mitochondrial import inner membrane translocase subunit Tim16 (AHRD V3.3 *** A0A2I4HS40_9ROSI),Pfam:PF03656 AT3G59280 Solyc06g068830.2 18 2 13 2 1 10 0 0 13 5 3 4 0 6 10 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A1U8HB76_CAPAN) Solyc06g068840.3 958 1010 966 903 891 963 908 894 810 998 771 737 928 757 651 Calcium-dependent phospholipid-binding Copine family protein (AHRD V3.3 *** A0A2U1NDK1_ARTAN) AT5G61900 Solyc06g068850.4 893 647 612 702 650 698 613 713 788 718 580 832 909 869 747 DCD (Development and Cell Death) domain protein (AHRD V3.3 *-* F4K521_ARATH) Solyc06g068853.1 4 0 7 4 8 4 3 4 4 2 1 0 2 2 4 DCD (Development and Cell Death) domain protein (AHRD V3.3 --* F4K518_ARATH) Solyc06g068857.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc06g068860.3 2214 2270 1640 1558 2165 2014 1902 2700 3301 2481 1844 2545 2390 2185 1429 Alpha-mannosidase (AHRD V3.3 *** E0XN34_SOLLC) AT5G13980 Solyc06g068870.3 5427 3455 2877 2731 2861 2882 2733 2646 2723 2978 2588 2674 2080 2713 2490 bHLH transcription factor 087 AT3G26744 Solyc06g068880.3 457 626 830 679 995 1162 1030 1320 948 543 914 1113 612 669 534 Carboxypeptidase (AHRD V3.3 *** A0A2G2ZBY4_CAPAN) AT1G28110 Solyc06g068890.1 15 5 4 5 2 0 7 3 4 1 7 1 8 17 4 Unknown protein Solyc06g068900.4 8 1 1 2 0 0 0 1 0 11 0 0 0 1 0 Nudix hydrolase 17, mitochondrial (AHRD V3.3 *** A0A2G2WL44_CAPBA) Solyc06g068910.3 536 1651 1513 1544 4126 4062 4036 4344 2307 924 1814 2506 748 1610 762 Receptor-like kinase 1 (AHRD V3.3 *** A0A061FVY1_THECC) AT1G48480 Solyc06g068920.3 3420 2092 2019 2009 1726 1922 1838 1647 2077 2272 1795 1870 1742 2221 2331 Protein kinase domain (AHRD V3.3 *** A0A200QLB1_9MAGN) AT3G17850 Solyc06g068930.2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Jasmonate ZIM domain protein g (AHRD V3.3 *** I3WTA5_NICAT) AT3G17860 Solyc06g068940.4 28 13 6 0 0 0 0 0 1 8 9 0 52 8 1 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LMA8_ARTAN) AT3G17980 Solyc06g068950.4 344 1660 1224 1367 1613 1553 1515 1744 1835 1011 702 1613 1350 1367 762 Phosphoethanolamine N-methyltransferase (AHRD V3.3 *** A0A2G2WLK0_CAPBA) Solyc06g068960.1 270 344 901 190 312 294 308 317 346 794 968 259 772 362 234 Calcium-binding allergen Ole e 8 (AHRD V3.3 *** A0A2G2WLM3_CAPBA) AT1G18210 Solyc06g068970.3 567 649 251 435 657 621 586 662 589 568 209 438 556 295 211 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) (AHRD V3.3 *** F4HRY1_ARATH) AT1G73650 Solyc06g068980.4 900 1392 1084 1117 1465 1564 1662 1564 1344 815 1203 888 1080 959 823 MAP kinase kinase kinase 39 AT1G73660 Solyc06g068990.4 323 374 440 396 548 476 439 444 508 332 364 443 203 360 303 Mitogen-activated protein kinase (AHRD V3.3 *** A0A2G2WLN1_CAPBA) AT3G18040 Solyc06g069000.3 17 102 55 58 260 164 159 299 69 32 50 88 10 62 34 GPI-anchored protein (AHRD V3.3 *** AT3G18050.1) AT3G18050 Solyc06g069010.3 11446 15887 9358 8829 10530 9164 9434 11965 8873 9468 6818 10596 15114 11513 8535 LeArcA1 protein containing 7 WD40 repeats AT1G18080 Solyc06g069020.4 3315 4096 3374 3374 3384 3933 3805 3671 3103 2640 2639 3039 4973 4548 3816 Elongation factor (AHRD V3.3 *** A0A200PY18_9MAGN) AT1G18070 Solyc06g069030.3 1028 687 510 933 725 708 719 546 599 817 647 423 669 572 824 microbial collagenase (AHRD V3.3 *** AT1G18060.1) AT1G18060 Solyc06g069040.4 30 19 19 8 1 0 3 2 5 3 3 0 34 14 32 glutathione S-transferase T4 Solyc06g069060.1 0 0 0 4 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc06g069070.1 77 37 376 1359 4 20 24 4 331 95 241 14 312 504 1730 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A1I9LP30_ARATH) AT3G18280 Solyc06g069080.3 48 96 95 97 68 99 100 90 106 78 57 63 83 97 65 Tetratricopeptide repeat (AHRD V3.3 *** A0A200Q6C1_9MAGN) AT2G43040 Solyc06g069090.3 5903 8984 7769 5537 7364 7269 6966 7231 5184 5227 4845 5782 9340 8102 6047 40S ribosomal protein S7 (AHRD V3.3 *-* A0A2G3D0S9_CAPCH) AT1G48830 Solyc06g069100.3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain (AHRD V3.3 *-* A0A200Q3F5_9MAGN) Solyc06g069110.4 0 1 38 11 35 14 14 19 31 16 26 58 0 15 38 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *-* A0A2U1LRB6_ARTAN) Solyc06g069120.3 30223 11837 7712 10965 7045 7964 6523 5638 8743 11802 9451 8223 5640 7856 11938 BnaA05g33450D protein (AHRD V3.3 *** A0A078J4B8_BRANA) Solyc06g069130.4 9 10 10 22 1 2 6 1 12 3 8 4 6 4 5 Kinesin-like protein (AHRD V3.3 *** A0A2G2WLN7_CAPBA) AT1G63640 Solyc06g069135.1 1 1 2 4 1 2 0 4 1 1 0 5 0 5 0 Ribosomal RNA small subunit methyltransferase NEP1 (AHRD V3.3 *-* A0A2G2YY18_CAPAN) Solyc06g069150.1 191 118 203 185 130 153 107 160 140 103 177 273 194 134 287 hypothetical protein (AHRD V3.3 *** AT1G13360.1) AT1G13360 Solyc06g069155.1 0 0 0 4 5 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc06g069170.4 892 973 1332 1172 1382 1166 1538 1060 1334 931 1599 1028 1071 1298 1524 AT-rich interactive domain protein (AHRD V3.3 *** AT1G73885.1) AT1G73885 Solyc06g069180.3 1205 1379 1249 1373 1590 1386 1386 1744 1726 1555 1092 1372 1563 1469 1367 Phosphatase 2A regulatory A subunit (AHRD V3.3 *** Q9S7C5_ORYSA) AT3G25800 Solyc06g069190.4 1388 685 762 788 297 235 248 297 608 1133 815 375 1246 754 759 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1MGD4_ARTAN) AT1G49050 Solyc06g069210.3 877 1106 1188 1203 1292 1256 1368 1211 1321 876 1167 1031 1212 1253 1044 protein CASP (AHRD V3.3 *** A0A2I4GTH2_9ROSI) AT3G18480 Solyc06g069220.1 4 8 13 12 17 4 4 16 10 2 0 3 3 5 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** Q9C6M0_ARATH) AT3G18490 Solyc06g069230.3 114 484 581 447 644 733 685 676 471 239 393 628 403 539 237 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200Q8J6_9MAGN) AT3G18524 Solyc06g069240.2 2315 896 912 1000 133 198 121 207 1152 1113 1459 691 1044 586 451 branched1b AT3G18550 Solyc06g069245.1 9 27 36 30 31 56 49 43 24 15 24 62 37 28 4 Unknown protein Solyc06g069250.2 2 7 1 6 4 9 0 0 3 2 0 10 2 0 0 At1g49000 (AHRD V3.3 *-* Q9M9A2_ARATH) AT1G49000 Solyc06g069260.1 15 13 14 23 9 8 4 7 3 12 2 8 3 14 26 Oleosin (AHRD V3.3 *** A0A200Q8I2_9MAGN) Solyc06g069270.1 4 6 33 18 8 12 7 14 10 6 1 2 5 11 30 Unknown protein Solyc06g069280.4 1815 1646 1444 1279 1370 1100 1119 1407 1434 1970 1270 2073 1215 1468 1252 Protein LSM14-like protein A (AHRD V3.3 *** A0A2G2WLR1_CAPBA) Solyc06g069290.3 28 97 87 77 173 144 131 144 166 100 90 108 81 76 70 Leucine-rich repeat receptor-like protein kinase family protein, putative (AHRD V3.3 *-* A0A061FQX7_THECC) AT3G25670 Solyc06g069300.1 68 130 129 133 151 132 114 139 200 122 180 139 176 124 147 Protein MIZU-KUSSEI 1 (AHRD V3.3 *** A0A2G2WLS1_CAPBA) AT5G23100 Solyc06g069310.3 1704 1143 1264 1124 1247 1296 1244 1026 856 1087 1123 1049 1199 893 1438 Nuclear factor Y, subunit B13 (AHRD V3.3 *** F4KBG0_ARATH) AT5G08190 Solyc06g069320.4 0 10 0 2 3 4 4 5 5 1 14 3 0 12 0 Tetraspanin (AHRD V3.3 *** A0A200Q8V3_9MAGN) Solyc06g069330.3 760 500 665 509 512 357 397 471 381 567 554 522 535 469 525 Protein kinase domain (AHRD V3.3 *** A0A200QQM3_9MAGN) AT5G08160 Solyc06g069340.1 1 0 7 2 0 1 7 1 3 1 0 5 0 1 0 hypothetical protein (AHRD V3.3 --* AT5G38790.1) AT5G38790 Solyc06g069350.3 221 103 209 200 146 119 127 75 115 130 194 150 117 131 162 Unknown protein Solyc06g069360.3 470 338 386 329 282 223 252 307 366 370 254 363 431 379 315 PHD and RING finger domain-containing protein (AHRD V3.3 *-* A0A2K3N8F5_TRIPR) Solyc06g069370.4 366 517 442 577 1123 1129 1171 988 511 293 437 459 544 532 355 bHLH transcription factor 046 AT5G08130 Solyc06g069380.4 175 271 617 611 291 300 340 224 533 592 597 322 404 342 1149 O-fucosyltransferase (AHRD V3.3 *** A0A2P5EBU6_TREOI) AT5G15740 Solyc06g150130.1 4103 2599 2042 3422 1019 884 826 998 2886 3880 2455 3167 3975 3048 3339 Dof zinc finger protein PBF (AHRD V3.3 *** A0A2G2WLZ1_CAPBA) AT5G60850 Solyc06g069390.4 456 372 345 394 324 371 398 365 468 440 483 506 443 510 442 D-aminoacyl-tRNA deacylase (AHRD V3.3 *** A0A2G2WLT1_CAPBA) AT2G03800 Solyc06g069400.4 20 20 89 105 44 25 35 34 76 24 37 48 22 56 241 Isoaspartyl peptidase/L-asparaginase (AHRD V3.3 *** A0A1U8EDB4_CAPAN) AT5G08100 Solyc06g069410.3 188 228 264 294 176 255 295 200 174 220 344 225 210 173 255 ADP,ATP carrier protein (AHRD V3.3 *** A0A2G2ZC50_CAPAN) AT5G17400 Solyc06g069420.3 99 55 70 67 31 31 27 24 55 67 48 15 44 52 152 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** Q9M9P7_ARATH) AT3G03290 Solyc06g069430.3 1546 1177 782 634 365 370 364 412 1216 1165 749 1143 1212 850 842 FRUITFULL-like MADS-box 1 AT5G60910 Solyc06g069440.3 7030 6292 4095 5323 5717 5736 5939 7034 5470 7594 4518 6215 4619 5515 4120 Zinc finger transcription factor 45 Solyc06g069450.4 497 359 503 488 557 542 538 565 403 463 481 452 315 404 484 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *-* A0A1I9LMI0_ARATH) Solyc06g069460.3 107 39 100 73 42 55 43 31 31 57 95 71 15 34 19 TCP transcription factor 6 Solyc06g069470.3 312 316 413 322 384 389 344 400 395 365 386 364 364 366 376 Glycerophosphodiester phosphodiesterase GDPD5 (AHRD V3.3 *** A0A2G2WM22_CAPBA) AT1G74210 Solyc06g069480.3 2043 1571 1050 1426 1158 1103 1331 1265 1581 1332 1066 1274 1395 1634 1544 Helicase (AHRD V3.3 *** A0A200R859_9MAGN) AT5G61140 Solyc06g069490.3 679 426 326 493 447 446 441 412 383 707 418 539 466 466 413 Transmembrane protein adipocyte-associated 1 (AHRD V3.3 *** A0A2U1LW35_ARTAN) Solyc06g069500.3 2013 1874 1759 1669 1856 1982 2111 1924 2075 1806 1720 1763 1508 2057 1879 Dentin sialophosphoprotein-like protein (AHRD V3.3 *-* Q9SD86_ARATH) AT5G07980 Solyc06g069510.3 301 174 195 100 128 144 120 138 117 190 120 168 185 178 190 hypothetical protein (AHRD V3.3 *** AT5G07950.1) AT5G07950 Solyc06g069520.3 826 948 1265 1231 1340 1354 1406 946 738 667 1126 686 1189 1076 1587 Protein Asterix (AHRD V3.3 *** A0A2G2WM88_CAPBA) AT5G07960 Solyc06g069530.3 457 1785 848 1215 1414 1227 1226 1598 1101 1175 898 1397 1292 1401 844 Biotin carboxyl carrier protein of acetyl-CoA carboxylase (AHRD V3.3 *** A0A1U8FI08_CAPAN) Solyc06g069540.1 0 8 1 0 1 4 12 1 1 5 1 3 0 2 4 Unknown protein Solyc06g069550.1 17 47 39 43 105 141 152 147 78 71 25 21 80 53 24 UDP-glucose 6-dehydrogenase (AHRD V3.3 *** A0A1U8F9G7_CAPAN) Solyc06g069560.3 1420 997 901 1146 1175 1373 1322 941 981 1020 956 895 1004 914 1120 ELM2 domain protein (AHRD V3.3 *** A0A1P8ARJ3_ARATH) AT1G26580 Solyc06g069565.2 93 101 118 103 76 155 140 105 87 81 86 63 108 79 93 UPF0725 protein (AHRD V3.3 *** XP_004235347.1) AT2G37435 Solyc06g069570.3 938 674 743 528 589 457 405 577 750 898 780 718 1090 837 561 SNAP25-like proteinous protein SNAP33 (AHRD V3.3 *** A0A1U8F981_CAPAN) AT5G61210 Solyc06g069580.3 1100 1473 1760 2144 2339 2387 2573 2163 2135 1814 2148 1965 1423 1412 1471 Heparanase-like protein 1 (AHRD V3.3 *** A0A2G2ZC77_CAPAN) AT5G07830 Solyc06g069590.3 2 6 18 3 2 4 11 5 4 7 5 12 14 6 20 Transcription factor PIF3 (AHRD V3.3 *-* A0A2G2WM68_CAPBA) AT5G61280 Solyc06g069600.3 0 1 0 0 0 0 0 0 0 0 0 5 0 0 0 bHLH transcription factor 047 Solyc06g069610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LysM domain receptor-like kinase 3 (AHRD V3.3 *** A0A2G2WM11_CAPBA) Solyc06g069620.1 0 2 0 1 0 2 3 0 7 3 6 0 1 5 0 Plant calmodulin-binding-like protein (AHRD V3.3 *-* A0A072U7E1_MEDTR) AT5G61260 Solyc06g069630.4 786 384 397 303 196 200 182 168 348 467 470 326 330 412 443 T-box transcription factor%2C putative (DUF863) (AHRD V3.3 *-* AT1G13940.2) Solyc06g069640.3 44 24 46 186 8 6 7 6 44 17 30 4 31 31 9 dCTP pyrophosphatase 1 (AHRD V3.3 *** A0A1U8FHZ8_CAPAN) Solyc06g069650.4 38 3 20 11 0 1 0 0 3 5 20 0 11 17 59 LRR receptor-like kinase family protein (AHRD V3.3 *** A0A072USD7_MEDTR) AT1G74360 Solyc06g069660.2 0 1 1 2 1 2 1 1 0 2 0 0 0 1 0 Formin-like protein (AHRD V3.3 *-* A0A2I4H3Z2_9ROSI) Solyc06g069670.4 24 27 21 29 5 27 15 12 19 29 28 5 31 34 62 Formin-like protein (AHRD V3.3 *-* A0A2G3CZ92_CAPCH) Solyc06g069680.1 0 9 2 6 0 2 1 0 4 8 0 5 4 2 17 transmembrane protein (AHRD V3.3 *** AT5G61340.1) AT5G61340 Solyc06g069690.4 1432 622 910 676 301 348 370 257 574 826 1087 608 718 1028 2288 Two-component response regulator-like APRR5 (AHRD V3.3 *** A0A2G3CZB4_CAPCH) AT5G61380 Solyc06g069700.4 105 118 104 106 171 163 110 136 114 144 132 175 133 181 195 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** A0A2U1KU72_ARTAN) AT5G61400 Solyc06g069710.3 88 27 9 11 0 0 1 0 5 6 1 1 12 20 42 NAC domain-containing protein (AHRD V3.3 *** A0A2G3C9H9_CAPCH) AT5G61430 Solyc06g069720.4 0 0 0 0 0 0 2 0 4 4 0 0 0 1 0 Thioredoxin (AHRD V3.3 *-* A0A200QER0_9MAGN) Solyc06g069730.3 61 800 154 276 1793 1572 2041 1532 764 575 275 566 143 129 72 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A1U8GPF4_CAPAN) AT3G47470 Solyc06g069740.1 26 14 93 9 0 1 0 2 7 16 116 7 12 25 12 Calcium-binding EF-hand family protein (AHRD V3.3 *** A0A2U1NCV0_ARTAN) Solyc06g069760.3 5953 2184 587 1444 1257 1282 1344 1055 1290 2781 709 1267 1538 997 1080 Dof zinc finger protein (AHRD V3.3 *** A0A2K3MQ38_TRIPR) AT3G47500 Solyc06g069770.3 2112 2036 2086 1529 1533 1507 1458 1421 1456 1839 1918 1667 2368 2048 2021 protein DCL, chloroplastic (AHRD V3.3 *** A0A2I4F4M4_9ROSI) AT5G62440 Solyc06g069780.4 631 519 456 631 505 436 475 485 554 665 467 501 690 617 452 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NXA0_ARTAN) AT3G47550 Solyc06g069790.4 910 3217 4841 5805 5967 7818 5137 4871 4514 3974 4199 6462 3541 5296 3153 Gibberellin-regulated protein (AHRD V3.3 *** S8CK34_9LAMI) AT1G74670 Solyc06g069800.2 4 4 1 7 3 7 7 14 3 9 4 2 3 4 3 DUF674 family protein (AHRD V3.3 *** A0A2K3NL09_TRIPR) Solyc06g069810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF674 family protein (AHRD V3.3 *** A0A2K3NL09_TRIPR) Solyc06g069820.4 533 422 432 398 564 427 405 525 374 390 228 551 377 331 333 DUF674 family protein (AHRD V3.3 *** A0A2K3NL09_TRIPR) Solyc06g069850.3 273 151 102 158 75 67 57 53 106 137 100 141 101 84 149 R2R3MYB transcription factor 30 AT5G62470 Solyc06g069860.4 1599 2808 3709 2540 3120 3690 3258 2758 1976 1459 3091 2001 3468 3224 3648 60S ribosomal protein L34 (AHRD V3.3 *** A0A1U8HB42_CAPAN) AT1G26880 Solyc06g069870.3 0 0 7 1 9 2 5 3 0 4 0 6 4 1 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1LK68_ARTAN) Solyc06g069880.1 21 42 3 27 27 39 37 52 20 20 21 25 32 36 49 protein PHYTOCHROME KINASE SUBSTRATE 3-like (AHRD V3.3 *** A0A2I4FQS5_9ROSI) AT1G18810 Solyc06g069890.4 1054 1621 1106 1076 1146 1092 987 1194 999 1004 1082 1171 2230 1605 1282 Nucleosome assembly protein family (AHRD V3.3 *** A9RDK1_PHYPA) Solyc06g069900.3 0 3 0 0 30 19 17 9 11 3 6 3 15 2 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MKU7_ARTAN) Solyc06g070900.3 516 1133 456 646 1496 1645 1997 1622 976 992 729 774 751 729 602 TCP transcription factor 17 AT3G47620 Solyc06g070910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g070920.3 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter A family member 7 (AHRD V3.3 *** A0A2G3AUR7_CAPCH) Solyc06g070930.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter A family member 7 (AHRD V3.3 *-* A0A2G2WRJ6_CAPBA) Solyc06g070940.4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ABC transporter A family member 2 (AHRD V3.3 *** A0A2G2WLX3_CAPBA) Solyc06g070950.2 3 0 0 2 2 0 5 2 4 7 9 7 5 2 29 ABC transporter A family member 3 (AHRD V3.3 *** A0A2G2ZCF6_CAPAN),Pfam:PF12698 Solyc06g070960.3 5 7 1 8 16 1 7 1 8 4 1 8 21 8 32 ABC transporter A family member 2 (AHRD V3.3 *** A0A2G3AUS5_CAPCH) Solyc06g070970.3 67 583 355 443 1370 1366 1401 1522 451 329 407 578 108 258 236 microtubule-associated futsch-like protein (AHRD V3.3 *-* AT5G62550.1) AT5G62550 Solyc06g070980.3 29043 16611 12721 14373 9293 9728 10292 7727 9257 10861 12575 8129 15802 13420 22130 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QF19_9MAGN) AT2G02760 Solyc06g070990.3 8 7 5 1 12 6 5 2 5 8 21 1 2 0 0 WRKY transcription factor 74 AT5G15130 Solyc06g071000.3 1496 1317 2167 2029 1750 1761 1699 1836 2364 1309 1891 1679 2447 3085 4331 Aldehyde dehydrogenase (AHRD V3.3 *** A8J5Z8_CHLRE) AT5G62530 Solyc06g071010.4 555 653 590 527 517 559 484 570 408 528 465 434 587 496 382 hypothetical protein (AHRD V3.3 *** AT1G18850.1) AT1G18850 Solyc06g071020.3 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 Pectate lyase (AHRD V3.3 *** A0A2G3C9U0_CAPCH) AT3G01270 Solyc06g071030.3 86 165 120 208 419 400 436 351 182 148 167 263 88 109 141 isochorismate synthase AT1G18870 Solyc06g071040.4 2421 1851 1595 2314 1932 1732 1817 2029 1688 2381 1473 1638 1566 2105 1973 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* AT5G62760.3) AT5G62760 Solyc06g071050.4 949 428 436 439 253 317 293 332 480 723 439 360 845 551 412 Hypersensitive-induced response protein (AHRD V3.3 *** A6YGE4_CARPA) Solyc06g071060.1 17 49 23 35 19 28 31 31 11 40 14 28 208 34 71 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1Q367_ARTAN),Pfam:PF13561 AT3G03980 Solyc06g071070.1 107 148 148 134 97 131 159 253 211 124 204 137 186 194 192 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1L921_ARTAN),Pfam:PF13561 AT3G03980 Solyc06g071090.3 13 43 27 60 71 80 83 63 9 13 20 51 15 37 44 Protein NRT1/ PTR FAMILY 2.9 (AHRD V3.3 *** A0A2G3C9R5_CAPCH) Solyc06g071100.4 7903 9229 6337 6477 4886 5017 5261 6572 9328 9534 5705 6978 7791 7250 7090 plasma membrane H+-ATPase AT5G62670 Solyc06g071110.3 150 144 232 137 183 244 259 169 189 144 198 181 208 184 180 DnaJ protein like (AHRD V3.3 *** A0A2I0WJV4_9ASPA) AT3G47940 Solyc06g071120.3 1389 1530 1290 1310 1354 1508 1606 1572 1597 1213 988 1121 1143 1338 1334 Ubiquitin carboxyl-terminal hydrolase-related protein (AHRD V3.3 *** F4JCR3_ARATH) AT3G47910 Solyc06g071130.3 0 16 18 24 7 25 15 21 10 7 5 8 1 7 16 Zinc finger protein (AHRD V3.3 *** A0A200QF78_9MAGN) AT1G74770 Solyc06g071140.3 11619 9093 7937 11758 9364 7966 8170 10810 7258 12328 8159 10708 7113 8817 7279 proline-rich family protein (AHRD V3.3 *-* AT5G62640.1) AT5G62640 Solyc06g071150.4 10 24 19 54 49 81 61 73 61 62 49 45 27 32 7 HIPL2 protein (AHRD V3.3 *** A0A2G2WLZ5_CAPBA) AT1G74790 Solyc06g071160.3 579 462 635 626 494 655 476 505 499 633 813 572 484 440 658 Galactosyltransferase family protein (AHRD V3.3 *** A0A2U1KC25_ARTAN) AT5G62620 Solyc06g071170.4 9481 4437 3096 3457 3347 2923 3016 4226 3566 6487 3702 4680 3779 3623 3328 tRNA (Ile)-lysidine synthase (AHRD V3.3 *** AT3G47850.1) AT3G47850 Solyc06g071180.3 489 389 167 559 619 611 387 513 191 707 417 450 405 274 417 Dynein light chain (AHRD V3.3 *** Q4W5W8_VICFA) Solyc06g071190.4 0 1 2 9 4 0 2 4 1 2 1 1 3 2 8 Rac5-interacting sub-apical pollen tube protein (AHRD V3.3 *** A0A067ZT21_TOBAC) AT1G18990 Solyc06g071200.3 954 953 597 815 726 756 825 855 861 831 602 731 787 1032 694 Transportin-3 (AHRD V3.3 *** A0A1J3HKD9_NOCCA) AT5G62600 Solyc06g071210.3 1506 1634 1597 1878 2370 2402 2348 2518 1874 2261 1692 1810 1350 1634 1449 Non-specific serine/threonine protein kinase (AHRD V3.3 *** Q56R02_SOLLC) Solyc06g071220.1 48 17 17 20 4 5 12 7 46 47 67 25 30 18 2 Unknown protein Solyc06g071230.3 5250 2709 2285 3092 2834 2527 2752 2554 3337 4437 4551 2916 2524 2402 5011 Transcription factor MYB1R1 (AHRD V3.3 *** MY1R1_SOLTU) AT1G19000 Solyc06g071240.3 2 0 1 0 0 0 0 0 0 2 4 0 0 7 0 Glutamine-dependent NAD(+) synthetase (AHRD V3.3 *-* A0A1Q3BLB4_CEPFO) Solyc06g071250.4 313 273 366 232 258 230 249 272 312 182 300 282 380 302 254 hypothetical protein (AHRD V3.3 *-* AT1G19010.1) AT1G74860 Solyc06g071260.4 205 375 371 417 432 470 456 379 288 185 350 299 432 351 382 BnaA06g17060D protein (AHRD V3.3 *** A0A078GFP7_BRANA) Solyc06g071270.3 395 397 253 360 302 306 250 217 327 307 303 374 425 408 422 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LVQ0_ARTAN) AT3G48070 Solyc06g071280.4 3209 2222 3495 1785 549 584 573 445 1284 2559 5345 795 5150 2650 2240 Enhanced disease susceptibility 1 protein (AHRD V3.3 *** Q2TQV0_SOLTU) AT3G48090 Solyc06g071290.3 201 216 171 178 157 146 149 183 161 129 121 147 116 112 248 Aldehyde dehydrogenase (AHRD V3.3 *** A0A0K9R405_SPIOL) AT1G74920 Solyc06g071300.1 6 14 4 9 9 8 13 14 7 10 15 10 18 15 11 AGAMOUS-like 98 (AHRD V3.3 *-* Q9FIW6_ARATH) Solyc06g071310.4 162 661 690 594 1114 1057 1028 1000 679 340 526 674 356 558 484 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3BSR2_CEPFO) Solyc06g071320.3 50 143 250 379 183 168 101 149 326 126 206 233 97 179 195 D-ribose-binding periplasmic protein (AHRD V3.3 *** A0A2P5F6E6_TREOI) Solyc06g071330.4 598 1181 932 981 1541 1461 1536 2058 1019 1200 1063 1515 574 796 567 Nucleobase-ascorbate transporter 8 (AHRD V3.3 *** A0A2G3C9N0_CAPCH) AT5G62890 Solyc06g071335.1 28 20 45 65 37 23 38 19 27 27 18 30 34 72 40 Unknown protein Solyc06g071340.1 19 50 42 39 39 44 41 35 19 23 24 53 27 27 12 Unknown protein Solyc06g071350.4 6727 4214 3363 3863 2967 3324 3508 3351 3894 4646 3281 3694 3359 4254 3740 Bromo adjacent homology (BAH) domain (AHRD V3.3 *-* A0A200QLJ5_9MAGN) AT3G48050 Solyc06g071370.1 139 86 109 133 37 57 41 36 104 67 142 74 81 89 158 NHL domain protein (AHRD V3.3 *** AT5G14895.1) AT5G62865 Solyc06g071380.3 257 176 179 146 135 126 87 97 148 208 175 138 194 205 261 Protein disulfide-isomerase 5-4 (AHRD V3.3 *-* A0A2I0X2U5_9ASPA) Solyc06g071390.3 86 164 266 278 429 417 384 340 202 161 292 283 241 250 225 26S proteasome complex subunit DSS1 (AHRD V3.3 *** A0A2G3C9J6_CAPCH) AT5G45010 Solyc06g071400.3 16 42 67 24 26 13 27 29 25 12 40 15 37 31 30 Bidirectional sugar transporter SWEET (AHRD V3.3 *** Q70ET6_SOLLC) AT5G62850 Solyc06g071410.3 954 1055 933 1199 1657 1547 1667 1613 1393 894 795 1121 641 834 1087 MAP kinase kinase kinase 40 AT5G50000 Solyc06g071420.3 625 423 397 438 407 435 424 400 370 392 468 394 352 385 478 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1KE89_ARTAN) AT3G47990 Solyc06g071430.3 3196 1831 1456 1625 1170 1097 1107 1088 1357 1668 1556 1267 1318 1715 1921 Protein EXECUTER 1, chloroplastic (AHRD V3.3 *** A0A1J3H0I8_NOCCA) AT1G27510 Solyc06g071440.4 435 359 470 475 353 327 308 326 335 356 459 347 463 332 610 CASP-like protein (AHRD V3.3 *** A0A2G3C9P3_CAPCH) AT2G36330 Solyc06g071450.4 206 312 270 308 335 384 345 381 271 227 197 329 425 334 247 Basal transcription factor complex subunit-related protein (AHRD V3.3 *** A0A2U1PCL8_ARTAN) AT1G18340 Solyc06g071460.3 311 464 523 396 336 399 390 365 277 235 435 311 696 573 454 Exosome complex component rrp40-like protein (AHRD V3.3 *** A0A2K3PBT7_TRIPR) AT4G32175 Solyc06g071470.4 3177 3224 2686 2958 2589 2398 2710 2785 3329 2805 2706 2424 3957 3487 3390 Peroxisomal membrane protein PEX14 (AHRD V3.3 *** A0A2G2ZCJ2_CAPAN) AT5G62810 Solyc06g071475.1 2 2 9 6 0 9 6 3 2 0 3 10 6 0 0 Unknown protein Solyc06g071480.3 264 370 342 291 347 243 293 286 286 389 298 227 529 386 209 Dof zinc finger protein PBF (AHRD V3.3 *** A0A2G2WM24_CAPBA) AT5G62940 Solyc06g071490.3 1395 1979 2347 2400 2423 2716 2769 2452 2682 1981 2365 2901 1893 2145 1778 serine/threonine-protein kinase ATM (AHRD V3.3 *-* A0A2I4DQU2_9ROSI) Solyc06g071500.3 3188 4239 6446 9516 2467 2565 2812 2113 6415 5406 9833 2771 6203 5876 13518 Boron transporter 1 (AHRD V3.3 *** A0A2G2WM36_CAPBA) Solyc06g071510.3 109 182 234 193 196 257 243 157 321 170 338 217 244 321 516 GDSL esterase/lipase (AHRD V3.3 *** A0A1U8H499_CAPAN) AT5G62930 Solyc06g071520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb-related protein A (AHRD V3.3 *** A0A2G3C9U4_CAPCH) AT4G18770 Solyc06g071530.4 1013 2102 2082 1587 2124 1798 1943 1761 1521 1037 1864 1371 2447 2029 1843 Unknown protein Solyc06g071540.3 119 113 291 178 199 243 231 159 91 144 294 133 173 119 137 transmembrane protein (AHRD V3.3 *** AT1G10660.4) AT5G62960 Solyc06g071550.3 299 476 541 422 453 472 491 486 600 486 552 432 616 452 380 Anthranilate phosphoribosyltransferase (AHRD V3.3 *** A0A2U1N145_ARTAN) AT5G17990 Solyc06g071560.3 526 337 381 318 317 324 265 291 257 275 240 430 193 392 297 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** A0A2G2V6E5_CAPBA) Solyc06g071570.3 19 136 85 197 102 71 76 66 27 13 16 6 27 51 221 Protein NRT1/ PTR FAMILY 2.9 (AHRD V3.3 *** A0A2G3C9R5_CAPCH) AT5G62680 Solyc06g071580.3 1036 654 758 711 384 493 411 393 497 757 673 545 770 798 735 ATPase, histidine kinase, DNA gyrase B-, and HSP90-like domain containing protein, expressed (AHRD V3.3 *** Q33AG5_ORYSJ) Solyc06g071590.3 45 128 168 147 267 209 190 215 162 107 124 116 179 161 87 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** F4I5H4_ARATH) AT5G50150 Solyc06g071600.3 653 604 737 693 878 808 744 766 664 558 680 808 730 717 693 kinetochore protein spc25 (AHRD V3.3 *** A0A2I4DXX8_9ROSI) AT3G48210 Solyc06g071610.3 9 23 31 33 14 7 8 3 27 11 51 10 3 28 25 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1Q346_ARTAN) AT5G50130 Solyc06g071620.3 42 62 67 108 32 44 58 34 111 103 73 36 42 77 65 Helicase (AHRD V3.3 *** A0A200PRA7_9MAGN) Solyc06g071630.2 293 271 197 230 216 217 169 217 226 277 197 265 160 220 163 integrator complex subunit 3 homolog (AHRD V3.3 *** A0A2I4HWG7_9ROSI) AT4G14590 Solyc06g071640.3 107 118 185 179 284 255 266 308 263 113 157 217 65 92 73 Tryptophan aminotransferase-related protein 2 (AHRD V3.3 *** A0A2G3C9P7_CAPCH) AT4G24670 Solyc06g071650.3 0 47 66 45 197 178 261 99 34 15 82 89 44 53 38 AP-1 complex subunit mu-1 (AHRD V3.3 *** A0A2G2V6E1_CAPBA) Solyc06g071660.3 4 5 35 8 9 12 13 6 10 39 14 8 25 7 46 LOB domain-containing protein (AHRD V3.3 *** A0A2U1Q2L9_ARTAN) Solyc06g071670.1 899 1110 1080 2087 1753 1565 1506 1966 883 1234 1189 1235 940 990 713 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q9FML3_ARATH) AT5G63100 Solyc06g071680.4 1248 1493 1309 1144 1165 1281 1260 1259 1273 1231 1007 1226 1870 1555 1110 Histone deacetylase (AHRD V3.3 *** A0A1U8EWM8_CAPAN) AT5G63110 Solyc06g071690.3 4 12 9 6 13 7 3 0 32 14 8 2 13 4 57 R2R3MYB transcription factor 50 Solyc06g071700.1 0 3 7 10 14 9 7 7 2 0 9 15 0 1 0 Amine oxidase (AHRD V3.3 *** A0A2G2V6E4_CAPBA) AT2G42490 Solyc06g071710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g071720.1 5160 6784 6456 5662 6267 7093 5783 5869 4674 4026 5695 4836 6751 5716 6133 60S ribosomal protein L27a (AHRD V3.3 *** A0A1U8H4G8_CAPAN) AT1G70600 Solyc06g071730.3 15 7 5 33 0 0 0 0 1 2 0 0 14 2 45 U-box domain-containing protein 52-like (AHRD V3.3 *-* A0A2K3L2U5_TRIPR) Solyc06g071750.3 55 52 33 58 86 66 70 39 30 24 63 30 98 43 64 Octicosapeptide/Phox/Bem1p (AHRD V3.3 *-* B6SZC5_MAIZE) Solyc06g071760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc06g071770.4 2862 1626 1182 1095 1071 894 917 1140 1882 1527 908 1318 2099 2055 1407 PB1 domain, Zinc finger, ZZ-type, UBA-like, Next to BRCA1, central domain protein (AHRD V3.3 *-* A0A2U1P8J3_ARTAN) AT4G24690 Solyc06g071780.4 161 157 208 303 259 221 225 213 211 206 257 191 490 282 336 Drought induced 19 protein-like (AHRD V3.3 *** A0A200RD12_9MAGN) Solyc06g071790.3 1618 4611 2835 3432 5248 3890 4163 5576 4363 3236 2998 3845 2592 2910 2606 Elongation factor Tu (AHRD V3.3 *** A0A2G2WM97_CAPBA) AT4G20360 Solyc06g071800.4 649 542 851 690 430 501 597 435 532 485 544 497 605 685 795 MAP kinase kinase kinase 41 AT3G48260 Solyc06g071810.1 1734 947 1047 448 38 32 68 57 498 1149 1868 345 1540 889 793 Receptor-like protein kinase (AHRD V3.3 *** Q8LP72_TOBAC) AT2G31880 Solyc06g071820.3 1640 602 914 1162 146 152 182 124 1928 833 1145 1260 1584 2074 3351 BTB/POZ and TAZ domain-containing protein 1 (AHRD V3.3 *** A0A2G3BFP5_CAPCH) AT5G63160 Solyc06g071830.2 15 12 2 1 0 4 0 0 48 3 2 5 3 1 2 BTB/POZ and TAZ domain-containing protein 2 (AHRD V3.3 *** A0A1U8HCU6_CAPAN) AT5G63160 Solyc06g071840.3 0 0 0 0 0 0 0 1 0 2 0 0 2 0 22 Pectate lyase (AHRD V3.3 *** A0A2G2ZW27_CAPAN) Solyc06g071850.3 780 584 602 523 444 403 504 393 577 572 663 494 535 558 733 Tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** Q67YJ9_ARATH) AT5G63200 Solyc06g071860.3 5830 5055 4741 5005 4109 4068 3896 4607 4774 5116 3641 5144 4910 5204 4878 Zinc finger transcription factor 46 AT3G48440 Solyc06g071870.3 1443 3070 2518 1643 2405 2430 2393 2300 1571 1337 2089 1797 3428 2821 1955 60S ribosomal protein L17 (AHRD V3.3 *** A0A2I0X0J2_9ASPA) AT1G27400 Solyc06g071880.4 3386 7403 6605 5107 6788 7449 7531 6467 4336 3782 5290 5046 7413 6400 5416 60S ribosomal protein L17 (AHRD V3.3 *** A0A2I0X0J2_9ASPA) AT1G27400 Solyc06g071890.3 80 72 111 107 147 138 117 91 56 84 95 40 64 85 105 Mitochondrial pyruvate carrier (AHRD V3.3 *** A0A2G2WMA1_CAPBA) Solyc06g071900.3 539 351 342 337 318 308 315 246 355 378 330 284 333 418 530 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1KUI5_ARTAN) AT1G07590 Solyc06g071910.3 868 2092 1694 2175 2245 2278 2505 2872 1330 1967 1640 2297 2807 2501 1371 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic (AHRD V3.3 *** A0A2G2ZCU2_CAPAN),Pfam:PF13561 AT1G24360 Solyc06g071920.4 4345 4310 3226 4425 3472 4082 3326 3581 3425 2537 1972 2982 5976 4236 4626 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A0F7JJ49_NICBE) Solyc06g071930.1 0 7 17 5 8 4 3 1 6 0 2 2 0 1 0 Unknown protein AT5G50335 Solyc06g071940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 vinorine synthase-like (AHRD V3.3 *-* A0A2I4DN07_9ROSI) Solyc06g071945.1 0 2 1 1 14 3 3 14 2 3 0 1 5 5 7 Unknown protein Solyc06g071950.3 71 101 149 102 81 121 114 120 115 99 146 85 77 56 80 GDP-mannose transporter GONST3 (AHRD V3.3 *** A0A1U8FXG8_CAPAN) Solyc06g071960.4 252 783 830 754 955 908 1010 998 662 490 658 696 456 687 594 Nucleoside diphosphate kinase (AHRD V3.3 *** A0A2G2WM92_CAPBA) AT5G63310 Solyc06g071970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g071980.3 223 173 257 203 127 168 159 151 191 162 197 191 208 189 225 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1N2C4_ARTAN) Solyc06g071990.4 860 943 2241 1559 1097 1285 1264 1008 744 792 1823 761 1633 1594 1521 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1N2C4_ARTAN) Solyc06g072000.3 1 3 4 16 6 10 7 2 4 10 3 13 8 8 14 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1N2C4_ARTAN) Solyc06g072010.2 10 6 27 22 6 28 14 10 5 9 5 10 13 12 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1N2C4_ARTAN) Solyc06g072013.1 82 81 53 82 100 70 53 72 63 101 45 108 48 81 42 Unknown protein Solyc06g072017.1 218 102 119 190 190 152 182 157 130 168 140 182 161 178 122 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1N2C4_ARTAN) Solyc06g072030.1 288 601 797 908 739 829 863 498 299 450 902 554 707 577 711 Unknown protein Solyc06g072040.1 3233 3057 4042 3885 3848 3534 3229 4602 5666 4646 4098 7013 3161 4068 2862 CONSTANS interacting protein 2a AT3G48590 Solyc06g072050.4 1069 770 764 774 666 770 768 695 814 740 675 776 779 773 921 CBS domain containing protein (AHRD V3.3 *** B6U1W0_MAIZE) AT5G50640 Solyc06g072060.1 27 63 85 138 56 78 74 46 53 91 95 36 21 65 40 Transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** Q8LBX6_ARATH) Solyc06g072070.2 41 137 135 113 136 167 147 175 109 89 124 140 140 89 108 Transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** Q9SMN3_ARATH) AT5G63500 Solyc06g072075.1 7 24 23 15 61 30 40 5 13 15 24 9 13 28 51 Unknown protein Solyc06g072080.3 27 56 57 76 173 145 132 183 117 56 58 149 65 79 27 ubiquitin activating enzyme Solyc06g072085.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g072090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ABC transporter (AHRD V3.3 *** Q6X4V5_GOSHI) Solyc06g072100.3 0 0 9 6 0 0 0 0 0 0 0 5 5 3 0 ABC transporter (AHRD V3.3 *** Q6X4V5_GOSHI) Solyc06g072110.4 1271 1020 1515 934 966 1191 966 1025 1248 1172 1368 1031 1334 1353 1134 testis-expressed sequence 2 protein-like (AHRD V3.3 *** A0A2I4FFJ2_9ROSI) AT1G17820 Solyc06g072120.3 4493 11542 6418 5417 8803 6966 6921 10335 7096 5633 4486 7293 12606 9874 5536 40S ribosomal protein SA (AHRD V3.3 *** A0A1U8H4B1_CAPAN) AT1G72370 Solyc06g072130.4 106 29 18 9 0 2 0 1 9 7 1 2 19 196 176 tonoplast intrinsic protein 3.1 AT1G17810 Solyc06g150131.1 201 170 296 252 266 271 276 206 211 188 275 230 163 211 327 ankyrin repeat protein (AHRD V3.3 *** AT1G73350.6) AT1G73350 Solyc06g072140.4 1143 1440 1518 1361 1459 1813 1695 1769 1247 1293 1301 1369 1527 1481 1443 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A1U8HAQ4_CAPAN) AT3G19980 Solyc06g072145.1 773 692 686 636 661 627 677 613 623 534 616 588 730 762 855 PB1 domain-containing protein (AHRD V3.3 *** A0A2U1L8R0_ARTAN) AT1G49920 Solyc06g072160.3 285 519 691 590 903 1031 1018 863 650 625 652 866 626 740 521 Alcohol dehydrogenase 1 (AHRD V3.3 *** A0A1U8H3Z9_CAPAN) AT5G24760 Solyc06g072170.2 213 593 533 340 487 476 468 547 474 291 398 443 704 595 493 coiled-coil domain-containing protein 12 (AHRD V3.3 *** A0A2I4GZE4_9ROSI) AT3G05070 Solyc06g072180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agenet-like domain-containing protein (AHRD V3.3 *** A0A103YGJ9_CYNCS) Solyc06g072190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Duf724 domain-containing protein 3 (AHRD V3.3 *-* A0A1J6IT05_NICAT) Solyc06g072200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agenet domain-containing protein (AHRD V3.3 *** A0A1Q3CB12_CEPFO) Solyc06g072210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Miraculin (AHRD V3.3 *** A0A1U8H778_CAPAN) Solyc06g072220.1 18 8 101 43 19 6 8 3 49 92 70 19 35 31 59 miraculin-like (AHRD V3.3 *** A0A2I4HMC5_9ROSI) Solyc06g072230.1 0 9 5 11 1 4 2 0 34 8 5 2 9 7 37 Proteinase inhibitor I3 (AHRD V3.3 *** A0A200QJU5_9MAGN) Solyc06g072240.1 4 83 55 71 194 160 110 177 78 28 27 85 24 74 10 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc06g072250.3 453 764 595 466 499 472 489 397 403 306 503 398 933 868 704 Methyltransferase (AHRD V3.3 *** A0A1Y1IC86_KLENI) AT5G57280 Solyc06g072253.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g072257.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g072270.4 423 475 503 468 530 538 553 521 470 413 431 527 329 494 422 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT1G64570 Solyc06g072280.3 440 833 878 706 857 802 857 682 639 453 892 642 1184 958 761 Small nuclear ribonucleoprotein E (AHRD V3.3 *** S8CHW8_9LAMI) AT4G30330 Solyc06g072290.3 1153 610 633 432 241 258 199 197 358 566 564 420 133 362 315 KIP1-like (AHRD V3.3 *** A0A200Q8I5_9MAGN) AT3G17680 Solyc06g072300.4 7505 6419 5311 5530 6917 6073 6236 7838 7241 7285 4836 8016 4480 5729 4611 Argonaute 1 AT1G48410 Solyc06g072310.3 133 249 395 370 371 500 365 330 279 156 284 373 137 311 85 Homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2G2V7B9_CAPBA) AT1G73360 Solyc06g072320.4 0 0 7 0 1 1 5 4 1 1 0 2 3 3 0 Long chain base biosynthesis protein 2a (AHRD V3.3 *** A0A2G2ZCW1_CAPAN) AT3G48780 Solyc06g072330.3 39 7 41 15 1 15 1 4 27 33 27 8 53 15 50 Mitochondrial import inner membrane translocase subunit TIM14 (AHRD V3.3 *** B6T323_MAIZE) Solyc06g072340.3 1096 1241 928 915 1140 1143 1138 1307 1168 995 662 995 1022 1246 765 Protein kinase domain (AHRD V3.3 *** A0A200R1G0_9MAGN) AT1G73460 Solyc06g072350.3 881 600 1596 2011 18 34 16 26 540 544 701 205 420 527 537 CASP-like protein (AHRD V3.3 *** A0A2G3CXI9_CAPCH) Solyc06g072360.3 757 644 366 633 393 459 384 339 428 319 539 358 575 506 785 Zinc finger protein (AHRD V3.3 *** A0A200QDS5_9MAGN) AT2G01940 Solyc06g072370.3 335 520 589 533 658 656 551 575 492 356 476 500 689 537 515 GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN93_SOLLC) Solyc06g072380.3 2391 1825 1870 1835 1789 1826 1916 2115 2189 2250 1608 2522 1916 2111 2071 3,4-dihydroxy-2-butanone kinase AT3G17770 Solyc06g072385.1 0 0 0 0 0 1 4 1 0 1 0 0 1 1 11 Type I inositol polyphosphate 5-phosphatase 5 (AHRD V3.3 *-* A0A199V5W7_ANACO) Solyc06g072400.3 0 0 0 1 0 2 1 0 3 4 2 2 10 4 15 Type I inositol polyphosphate 5-phosphatase 5 (AHRD V3.3 *-* IP5P5_ARATH) Solyc06g072410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF674 domain-containing protein (AHRD V3.3 *** A0A1Q3CA01_CEPFO) Solyc06g072420.3 0 0 13 3 0 0 4 1 0 0 0 0 0 1 0 Purple acid phosphatase (AHRD V3.3 *** A0A2G2V7G9_CAPBA) AT3G17790 Solyc06g072430.3 135 41 64 41 46 47 57 49 78 26 38 114 82 68 79 BAG family molecular chaperone regulator 5, mitochondrial (AHRD V3.3 *-* A0A2I0XHJ2_9ASPA) Solyc06g072440.3 429 647 624 609 737 563 604 557 505 611 564 578 798 633 520 B-cell receptor-associated-like protein (AHRD V3.3 *** Q9LSH0_ARATH) AT3G17780 Solyc06g072450.1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 Agenet-like domain-containing protein (AHRD V3.3 *** A0A103YGJ9_CYNCS) AT1G06340 Solyc06g072460.1 661 358 481 110 4 4 0 5 68 443 1007 37 444 372 340 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *-* Q9ZUW8_ARATH) AT2G27660 Solyc06g072470.4 730 1304 1554 1264 1847 1916 2118 1697 1395 985 1763 1188 1036 991 1291 50S ribosomal protein L29, chloroplastic (AHRD V3.3 *** A0A2G3CA56_CAPCH) AT5G65220 Solyc06g072480.1 512 520 327 416 583 480 330 442 215 227 430 417 619 565 316 knox-like 1 Solyc06g072490.3 2367 5645 4020 2766 3738 3384 3462 4200 3128 2395 2472 2993 6180 5124 3856 40S ribosomal protein S3a (AHRD V3.3 *** A0A2G3CA33_CAPCH) AT4G34670 Solyc06g072500.2 134 69 94 81 75 68 80 59 89 51 64 82 71 84 92 Acyl-CoA N-acyltransferase (AHRD V3.3 *** A0A2U1L1E7_ARTAN) AT1G18335 Solyc06g072510.4 2 4 0 2 5 4 1 0 0 2 1 1 0 0 0 Phosphate carrier protein, mitochondrial (AHRD V3.3 *** A0A2G2V878_CAPBA) Solyc06g072520.2 330 229 231 248 131 129 96 144 174 252 253 277 135 156 194 bHLH transcription factor GBOF-1 AT5G50915 Solyc06g072530.3 0 5 1 8 10 8 2 12 9 7 1 2 10 8 4 CASP-like protein (AHRD V3.3 *** A0A328D0P9_9ASTE) AT4G25040 Solyc06g072540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *-* I6N942_DATST) Solyc06g072550.3 65 65 92 115 33 35 28 11 94 95 106 80 101 70 34 CASP-like protein (AHRD V3.3 *** A0A2I4FJL7_9ROSI) AT4G25040 Solyc06g072560.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3AXR7_CAPCH) Solyc06g072570.4 1882 1651 1633 1264 1825 1831 1545 1791 1342 1765 1573 1660 2068 1711 1417 ubiquitin conjugating enzyme AT5G50870 Solyc06g072580.3 1598 1847 2023 2037 2414 2534 2589 2697 1972 1961 1689 1837 1974 1827 1575 Pyruvate dehydrogenase E1 component subunit beta (AHRD V3.3 *** A0A2G3CA95_CAPCH) AT5G50850 Solyc06g072590.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g072600.3 189 384 306 287 407 498 489 369 303 180 278 236 386 316 377 Mitochondrial import inner membrane translocase subunit TIM8 (AHRD V3.3 *** A0A1U8H3V4_CAPAN) AT5G50810 Solyc06g072610.3 388 368 378 389 276 334 260 270 355 370 401 306 405 315 407 S-acyltransferase (AHRD V3.3 *** A0A2G3CA91_CAPCH) Solyc06g072620.4 185 31 36 42 1 2 1 0 18 42 19 10 6 7 40 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVH8_SOLTU) AT3G48740 Solyc06g072630.4 19 8 7 12 6 2 5 0 3 9 1 0 0 8 21 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A2G3CA74_CAPCH) AT3G48740 Solyc06g072640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVH9_SOLTU) AT3G48740 Solyc06g072650.1 6 3 0 3 0 0 0 1 0 0 0 0 12 3 7 Small auxin up-regulated RNA61 AT5G50760 Solyc06g072660.4 278 1656 1563 1001 1796 2067 1699 1906 1547 542 1174 1522 696 1706 530 DEK (AHRD V3.3 *-* A0A200R412_9MAGN) AT5G63550 Solyc06g072670.3 0 0 37 1 4 0 3 1 4 13 25 0 0 0 0 Hydroxysteroid dehydrogenase (AHRD V3.3 *** Q2R3W3_ORYSJ) AT5G50700 Solyc06g072680.4 4 9 7 16 18 8 16 11 3 4 20 12 3 7 17 HVA22-like protein (AHRD V3.3 *** A0A2G2ZD02_CAPAN) AT5G50720 Solyc06g072690.3 86 47 74 76 115 128 126 117 46 56 86 60 79 69 78 Mitotic-spindle organizing protein 1B (AHRD V3.3 *** A0A1U8H3T2_CAPAN) Solyc06g072695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc06g072700.3 990 1028 1314 1269 3259 2989 2628 2450 1005 1415 1771 1123 884 664 1971 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6PUZ2_ACTCH) AT5G63530 Solyc06g072710.3 560 455 161 398 585 600 564 549 455 519 145 457 444 234 372 RNA polymerase sigma factor sigA (AHRD V3.3 *** A0A2G2ZD00_CAPAN) AT1G64860 Solyc06g072720.3 1049 835 784 804 763 839 827 735 755 741 976 699 939 981 866 Zinc finger transcription factor 47 AT1G32360 Solyc06g072725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g072730.4 98 176 276 221 463 380 467 423 336 93 300 202 268 224 226 WEB family protein, chloroplastic (AHRD V3.3 *** A0A2G2WMC9_CAPBA) AT5G16730 Solyc06g072740.1 89 97 32 66 126 116 74 116 81 127 39 170 120 98 90 Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** A0A1U8H3S2_CAPAN) Solyc06g072750.3 170 146 92 157 70 113 120 102 126 113 144 117 136 208 147 Heat stress transcription factor A-1 (AHRD V3.3 *** A0A2G3ARP3_CAPCH) Solyc06g072760.4 10 27 63 47 117 91 75 94 77 49 45 69 27 42 21 Syntaxin-21 (AHRD V3.3 *** A0A1U8H763_CAPAN) Solyc06g072770.3 301 286 194 227 276 240 262 253 307 291 165 165 361 232 302 Binding partner of acd11 1 (AHRD V3.3 *** A0A314L950_NICAT) Solyc06g072780.2 24 19 9 21 50 20 27 14 16 27 27 19 11 22 19 Unknown protein Solyc06g072790.3 685 486 531 502 540 629 454 541 497 588 558 467 424 517 502 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8ASM3_ARATH) AT3G16090 Solyc06g072800.4 471 514 642 690 812 845 792 635 517 560 706 656 760 608 585 ADP-ribosylation factor (AHRD V3.3 *** Q5FYS3_DAUCA) Solyc06g072810.4 40 827 625 868 1825 1743 1492 1994 997 313 449 1014 97 441 352 Aspartic/glutamic acid-rich protein (AHRD V3.3 *-* Q8L6X8_ARATH) AT5G17160 Solyc06g072820.3 522 334 333 337 277 358 361 349 311 367 450 331 359 411 489 Tudor/PWWP/MBT superfamily protein (AHRD V3.3 *-* A0A1I9LQC0_ARATH) AT3G03140 Solyc06g072830.4 262 1369 1678 2711 3751 4494 4911 3353 1402 963 1921 1907 225 925 1021 cell division cycle 20.2, cofactor of APC complex-like (AHRD V3.3 *** A0A2I4FBA0_9ROSI) AT4G33270 Solyc06g072840.3 140 208 335 313 246 126 137 94 148 234 220 182 421 237 485 hypothetical protein (AHRD V3.3 *** AT3G03150.1) AT5G17165 Solyc06g072845.1 53 268 795 570 147 122 104 80 265 225 702 174 420 354 1928 hypothetical protein (AHRD V3.3 *** AT5G17165.1) AT5G17165 Solyc06g072850.1 1 0 2 9 0 0 1 0 1 0 1 0 6 0 3 Unknown protein Solyc06g072870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2G3CA94_CAPCH) Solyc06g072880.2 0 1 0 0 0 2 0 0 2 5 0 0 19 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2G3CA94_CAPCH) Solyc06g072890.3 0 10 16 5 20 18 18 14 10 10 5 13 16 12 0 WUSCHEL related homeobox 11 (AHRD V3.3 *** A0A1I9LND7_ARATH) AT3G03660 Solyc06g072900.4 1 8 20 4 15 19 8 19 6 3 2 13 1 5 7 60S ribosomal protein L13 (AHRD V3.3 *-* K4AF75_SETIT) Solyc06g072910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aluminum-activated malate transporter 9 (AHRD V3.3 *-* A0A2D1A7Z5_SOLLC) Solyc06g072920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aluminum-activated malate transporter-like (AHRD V3.3 *** K4BJA0_SOLLC) Solyc06g072930.4 571 469 610 538 546 610 558 479 448 493 460 444 423 579 563 Gag-Pol polyprotein/retrotransposon (AHRD V3.3 *** AT2G38695.1) Solyc06g072940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 auxin canalization protein (DUF828) (AHRD V3.3 --* AT3G22810.1) Solyc06g072950.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ABC transporter (AHRD V3.3 *-* A0A200QFV1_9MAGN) Solyc06g072960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter (AHRD V3.3 *** A0A200QFV1_9MAGN) Solyc06g072970.3 325 188 100 93 138 118 113 117 144 160 127 140 157 177 113 Zinc finger with UFM1-specific peptidase domain protein (AHRD V3.3 *** A0A2K3MZZ7_TRIPR) AT5G24680 Solyc06g072980.4 1708 1035 758 965 638 638 639 705 609 1274 857 808 1233 1138 727 Autophagy-related protein 13 (AHRD V3.3 *** A0A200PMJ6_9MAGN) AT3G49590 Solyc06g072990.1 0 0 3 7 0 0 1 2 3 0 4 0 0 2 0 Protein RESPONSE TO LOW SULFUR 2 (AHRD V3.3 --* LSU2_ARATH) AT3G49570 Solyc06g073000.4 12 8 38 42 24 22 20 11 11 17 19 7 12 14 24 Thaumatin-like protein 1 (AHRD V3.3 *** A0A2G2ZDD9_CAPAN) AT5G24620 Solyc06g073010.3 0 2 8 0 0 1 0 1 0 1 0 0 0 0 0 PGPS/D3 (AHRD V3.3 *-* Q9ZTN4_PETHY) Solyc06g073020.3 1234 844 842 781 611 588 559 670 680 1135 710 855 733 703 699 Serine protease inhibitor, Kazal-type family protein (AHRD V3.3 *** Q9M267_ARATH) Solyc06g073030.3 32 20 59 36 9 14 10 17 26 30 52 16 33 18 58 Stomatin family protein (SPFH domain/Band 7 family protein) (AHRD V3.3 *** A0A166USA6_9PEZI) AT4G27585 Solyc06g073040.1 8 42 33 10 10 9 26 6 34 18 37 10 12 1 8 ovate family protein 11 Solyc06g073050.2 1280 603 2619 735 302 393 400 373 667 1412 1878 726 1114 644 651 NAC domain-containing protein 14 (AHRD V3.3 *** A0A2G3CAD7_CAPCH) AT5G24590 Solyc06g073060.3 472 399 494 409 297 376 426 372 669 695 503 419 1044 573 420 IAA-amino acid hydrolase ILR1-like 4 (AHRD V3.3 *** A0A1U8H3P8_CAPAN) AT5G54140 Solyc06g073070.2 1 5 7 2 4 3 7 1 4 3 1 0 8 5 0 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6Q9D5_ACTCH) Solyc06g073080.4 87 395 457 25 0 1 3 0 32 569 137 4 1492 427 554 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QGX7_ARTAN) AT5G24530 Solyc06g073090.3 839 503 658 486 621 499 557 638 589 1207 659 705 418 686 562 chloroplast-specific ribosomal protein chloroplast-specific ribosomal protein AT5G24490 Solyc06g073100.4 7 28 34 20 31 38 58 36 38 43 28 18 17 22 2 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2WMF0_CAPBA) AT3G27950 Solyc06g073110.3 1237 1040 1057 1228 737 659 723 689 1025 1298 1279 846 1108 975 1092 mRNA, clone: RTFL01-36-E19 (AHRD V3.3 *** E4MXZ6_EUTHA) AT1G08760 Solyc06g073120.4 719 879 798 614 737 783 713 572 685 557 738 699 1058 855 1092 Ribosomal RNA processing protein 36 (AHRD V3.3 *** A0A2U1LXL6_ARTAN) AT1G12650 Solyc06g073130.4 297 224 342 275 245 268 301 331 339 395 285 319 352 320 371 RNA-binding ASCH domain protein (AHRD V3.3 *** F4IR54_ARATH) AT2G43465 Solyc06g073140.2 3 0 3 1 0 0 0 0 0 1 4 0 0 0 10 Transmembrane protein (AHRD V3.3 *** Q1PDF2_ARATH) Solyc06g073150.3 654 856 1050 725 893 856 874 854 833 619 745 689 985 780 877 COP9 signalosome complex subunit 5 (AHRD V3.3 *** A0A1U8H3N8_CAPAN) AT1G22920 Solyc06g073155.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Early nodulin-like protein 1-like (AHRD V3.3 *** A0A2K3KNW3_TRIPR) Solyc06g073160.4 298 267 207 262 177 256 243 145 185 213 234 243 256 259 337 DNA double-strand break repair protein (AHRD V3.3 *-* AT5G40520.2) AT5G40520 Solyc06g073170.1 669 442 274 489 261 287 317 295 310 628 308 382 496 284 382 transmembrane protein (AHRD V3.3 *** AT2G43540.1) AT2G43540 Solyc06g073180.3 9371 5415 624 3329 4338 3847 3857 4312 3012 5271 833 2253 3468 900 1258 CONSTANS interacting protein 1 AT1G06040 Solyc06g073190.3 2059 1851 1114 2331 1305 1167 1152 1389 2090 1707 1871 1812 1872 1730 2828 fructokinase 2 AT3G59480 Solyc06g073200.4 374 206 178 155 150 197 175 132 169 182 221 167 173 210 253 Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2G2V4F2_CAPBA) AT3G59470 Solyc06g073210.4 166 160 226 203 146 170 171 106 167 132 209 170 228 200 233 protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2I4HVM5_9ROSI) Solyc06g073220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Stigma-specific Stig1 family protein (AHRD V3.3 *** A0A2U1KMG6_ARTAN) AT4G26880 Solyc06g073230.4 987 532 504 433 297 431 481 270 308 487 571 375 496 440 556 tRNA-dihydrouridine synthase (AHRD V3.3 *** Q7XUN7_ORYSJ) AT3G49640 Solyc06g073240.3 268 311 438 371 563 538 462 621 459 384 467 407 371 333 395 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) AT4G34215 Solyc06g150132.1 5 52 118 88 32 36 38 40 55 66 96 46 39 24 81 Calcium-binding protein (AHRD V3.3 *-* Q9SCA1_LOTJA) AT2G43290 Solyc06g073250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g073260.3 655 1360 788 751 1544 1452 1503 1475 1205 988 706 811 855 513 844 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic (AHRD V3.3 *** A0A2G3CAL3_CAPCH) AT1G09340 Solyc06g073270.4 418 625 709 721 764 762 834 672 535 558 798 640 650 650 663 Golgi apparatus membrane protein TVP23 (AHRD V3.3 *** A0A2G2ZD48_CAPAN) AT1G09330 Solyc06g073280.3 904 1513 1106 1218 1665 1362 1435 1918 1935 1321 943 1432 1585 1477 1112 LL-diaminopimelate aminotransferase (AHRD V3.3 *** A0A2R6R247_ACTCH) AT4G33680 Solyc06g073290.1 528 1246 467 1099 1918 1498 1483 1619 1210 1096 473 581 936 485 457 Tetrapyrrole-binding protein, chloroplastic (AHRD V3.3 *** A0A2G2ZDA2_CAPAN) AT3G59400 Solyc06g073300.1 4937 9682 9724 6479 8746 9420 8227 7757 5933 4588 7167 6101 12001 9331 8740 60S ribosomal protein L27 (AHRD V3.3 *** A0A2G3CAK1_CAPCH) AT4G15000 Solyc06g073310.3 4424 8424 7547 6270 7852 7684 7847 6867 5251 4317 5438 5568 10972 8878 6909 60S ribosomal protein L9 (AHRD V3.3 *** A0A2G3AX04_CAPCH) AT1G33120 Solyc06g073320.3 28027 20379 8035 16738 23810 27839 26594 23029 26821 30927 19212 21272 16327 9524 10398 GDP-L-galactose phosphorylase 1 (AHRD V3.3 *** A0A1U8HAC0_CAPAN) AT4G26850 Solyc06g073330.4 5209 5803 3931 3243 3601 3329 3320 4056 3727 3908 2622 3538 5666 4659 4110 Lysine--tRNA ligase (AHRD V3.3 *** A0A2G2V3J7_CAPBA) AT3G11710 Solyc06g073340.3 1289 995 971 1048 864 784 798 802 959 1090 1003 930 1153 1189 1271 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CAI7_CAPCH) Solyc06g073360.3 688 892 1109 1004 952 927 918 837 911 770 801 780 1275 1125 1086 succinate dehydrogenase subunit 7B, mitochondrial (AHRD V3.3 *** A0A2I4HJZ8_9ROSI) AT5G62575 Solyc06g073370.4 3034 5311 4807 3621 4268 4613 4245 4051 2760 2652 3940 3173 5867 5112 5214 40S ribosomal protein S18 (AHRD V3.3 *** A0A2G3B1S6_CAPCH) AT1G34030 Solyc06g073380.3 288 300 362 339 253 269 287 292 264 251 326 376 326 242 281 Histidine protein methyltransferase 1 (AHRD V3.3 *** A0A2K3PLQ5_TRIPR) AT2G43320 Solyc06g073390.3 743 697 621 628 716 723 792 696 685 583 570 642 684 792 775 farnesyl protein transferase subunit A AT3G59380 Solyc06g073400.3 1056 908 912 920 965 1032 975 839 741 705 742 823 878 1013 784 Endonuclease III homolog (AHRD V3.3 *** A0A2G3CAJ1_CAPCH) AT2G31450 Solyc06g073410.3 148 269 380 297 375 334 364 315 260 235 236 281 287 298 319 Gamma-secretase subunit APH1-like (AHRD V3.3 *** A0A2G2ZDI0_CAPAN) AT2G31440 Solyc06g073420.3 394 263 330 275 170 307 262 251 309 412 367 320 404 293 318 Inositol transporter 1 AT2G43330 Solyc06g073430.4 4483 6783 9124 6331 8697 9210 8002 7244 4675 4813 7071 5877 8086 7439 8499 40S ribosomal protein S29-like (AHRD V3.3 *** A0A2I4F7M1_9ROSI) AT3G44010 Solyc06g073450.4 4971 2212 2062 2151 2542 2850 2660 2079 2012 2010 2969 1562 2100 1956 4389 hypothetical protein (DUF1685) (AHRD V3.3 *** AT1G05870.9) AT2G31560 Solyc06g073460.4 2025 1938 2402 2732 2593 2782 2942 2558 2342 2037 3133 2307 1854 2081 2873 phospholipid hydroperoxide glutathione peroxidase AT2G31570 Solyc06g073470.3 354 820 515 678 831 787 810 812 705 506 519 630 763 702 542 Biotin synthase (AHRD V3.3 *** A0A2G3CAI1_CAPCH) AT2G43360 Solyc06g073480.3 0 0 8 0 0 0 0 1 3 7 2 0 2 0 1 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1Q0P6_ARTAN) AT5G17580 Solyc06g073490.2 165 149 177 177 167 208 221 223 251 191 194 212 217 193 191 transmembrane protein (AHRD V3.3 *** AT2G43250.1) AT2G43250 Solyc06g073500.3 686 430 267 283 192 182 197 201 514 433 255 309 565 497 641 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** A0A1I9LM77_ARATH) AT3G59300 Solyc06g073510.3 503 662 654 473 739 837 780 705 521 472 524 629 784 782 368 Origin recognition complex subunit 2 (AHRD V3.3 *** A0A2I0W1F8_9ASPA) AT2G37560 Solyc06g073520.3 224 203 202 245 433 407 432 279 322 325 349 324 329 231 325 Solute carrier family 35 protein (DUF914) (AHRD V3.3 *** A0A1I9LLD6_ARATH) AT3G59340 Solyc06g073530.3 0 2 0 4 0 0 2 6 0 0 0 1 0 0 0 Argonaute4c AT2G27040 Solyc06g073540.4 22737 13731 14061 12650 15047 16631 16379 16030 11470 18601 12335 18370 9071 11506 11465 Argonaute4b AT2G27040 Solyc06g073550.3 2264 2838 1785 2008 2470 2400 2388 2741 2169 1978 1659 2310 3128 3074 2205 La-related protein 1 (AHRD V3.3 *** A0A2G3CAE9_CAPCH) AT5G21160 Solyc06g073560.4 2 8 10 16 9 6 2 1 12 6 60 12 2 12 4 Isovaleryl-CoA dehydrogenase (AHRD V3.3 *** B4FQ64_MAIZE) Solyc06g073570.4 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1Q1Z2_ARTAN) Solyc06g073580.4 1 1 3 0 0 3 1 1 0 0 0 0 3 0 0 1-aminocyclopropane-1-carboxylate oxidase1 Solyc06g073583.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Rhodanese-like domain (AHRD V3.3 *** A0A200RA76_9MAGN) AT2G21045 Solyc06g150133.1 15 54 20 61 38 26 25 32 321 134 137 108 172 50 5 Cysteine proteinase inhibitor (AHRD V3.3 *-* A0A2G2ZD82_CAPAN) Solyc06g073587.1 78 75 76 122 151 107 99 68 708 276 147 290 300 138 48 Cysteine proteinase inhibitor (AHRD V3.3 *-* A0A2G2ZD82_CAPAN) Solyc06g073590.3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Solyc06g073590 Solyc06g073600.4 4727 2256 1602 1415 1595 1647 1318 1870 2168 2232 1603 1902 2121 1854 1885 Ubiquitin-associated/translation elongation factor EF1B protein (AHRD V3.3 *** A0A2U1Q4S3_ARTAN) AT2G26920 Solyc06g073610.3 63 143 217 332 547 560 433 491 251 152 227 270 62 120 151 cyclin B1 AT4G37490 Solyc06g073615.1 170 125 201 171 92 92 130 115 155 126 177 96 193 138 204 Molybdopterin synthase catalytic subunit (AHRD V3.3 *** A0A2G3C6U0_CAPCH) AT2G43760 Solyc06g073630.3 2249 1885 1734 1886 1783 1639 1660 1881 2114 2134 2166 1902 1962 1872 2048 Cyclin-dependent kinase C-2 (AHRD V3.3 *** A0A2G2ZDI2_CAPAN) AT5G10270 Solyc06g073640.4 131 143 157 197 122 164 238 155 141 171 137 147 159 157 289 GAMYB-like2 AT3G11440 Solyc06g073650.1 233 290 344 266 269 321 329 315 271 274 268 238 262 337 220 F-box/WD-40 repeat-containing protein (AHRD V3.3 *** A0A2G2YGR9_CAPAN) AT5G21040 Solyc06g073660.3 57 283 228 336 407 340 365 360 245 157 284 323 388 254 279 Lipid-transfer protein (AHRD V3.3 *-* B6TD92_MAIZE) AT3G43720 Solyc06g073665.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 protein Asterix isoform X2 (AHRD V3.3 --* XP_004241601.1) Solyc06g073670.4 890 476 601 603 459 545 569 456 555 519 586 494 523 584 701 Protein FAR1-RELATED SEQUENCE 3 (AHRD V3.3 *** A0A2G2WMS5_CAPBA) Solyc06g073690.2 456 499 541 598 434 449 513 437 413 354 419 467 561 657 674 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* A0A2U1PDP2_ARTAN) Solyc06g073700.3 932 889 1209 893 842 948 914 652 800 721 1404 729 951 920 1209 U6 snRNA-associated Sm-like protein LSm8 (AHRD V3.3 *** A0A1U8H3F9_CAPAN) AT1G65700 Solyc06g073710.4 8 23 45 19 44 46 28 12 25 23 42 12 9 30 41 glucan endo-1,3-beta-glucosidase 14-like (AHRD V3.3 *** A0A2I4FFF8_9ROSI) AT3G15800 Solyc06g073720.3 5403 3969 3985 4029 3031 2829 2747 2799 4148 5216 5200 2843 3321 3426 4953 EIL1 AT3G20770 Solyc06g073730.2 2431 2712 3179 2958 1584 1494 1564 1433 4356 3072 4741 1716 3157 3261 4078 LeEIL4EIN3-like AT3G20770 Solyc06g073740.3 946 1539 1376 1363 1732 1554 1628 1782 2463 1594 1541 1720 1412 1553 1624 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A1P8BG25_ARATH) AT5G20950 Solyc06g073750.4 24 107 197 293 158 163 97 124 103 137 68 238 11 131 33 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A2U1QCD6_ARTAN) AT5G20950 Solyc06g073760.3 23 276 210 207 478 476 447 457 270 237 201 336 450 402 198 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A1P8BG25_ARATH) AT5G20950 Solyc06g073770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g073780.4 3838 3190 2346 2185 2503 2481 2413 2927 3372 2310 1866 2866 2546 2957 1891 SMC3 AT2G27170 Solyc06g073790.3 1874 4023 4105 2925 3710 3694 3978 3396 2243 2205 2832 2576 4581 4042 3238 40S ribosomal protein S11 (AHRD V3.3 *** A0A2G2YII0_CAPAN) AT4G30800 Solyc06g073800.3 1381 3644 3579 2614 3364 3404 3232 3402 2637 1889 2444 2701 4654 3545 2754 40S ribosomal protein S11 (AHRD V3.3 *** A0A2G2YII0_CAPAN) AT4G30800 Solyc06g073810.4 787 735 733 751 885 839 942 862 706 727 886 821 746 751 725 Zinc finger, CCHC-type (AHRD V3.3 *-* A0A2U1KT89_ARTAN) AT3G43590 Solyc06g073820.3 52 82 71 74 100 93 111 110 85 35 25 133 66 98 77 Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** A0A2G2XWY4_CAPAN) Solyc06g073825.1 0 11 10 8 4 1 11 7 1 0 7 5 0 2 2 Unknown protein Solyc06g073830.1 7 5 140 2 0 0 0 0 6 31 144 11 11 9 32 Calcium-binding protein CML38 (AHRD V3.3 *** A0A2G3BAP9_CAPCH) AT1G76650 Solyc06g073840.3 2332 1438 1337 925 986 882 873 1051 1364 1502 1364 1175 1380 1304 1125 Outer envelope protein 61 (AHRD V3.3 *** A0A1U8HC47_CAPAN) AT5G21990 Solyc06g073850.1 146 114 470 30 76 51 35 50 79 75 661 120 107 98 240 hypothetical protein (AHRD V3.3 *** AT2G27180.1) Solyc06g073860.2 1720 1045 966 899 819 777 780 780 921 1565 1078 912 1007 1116 951 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PQ21_ARTAN) AT5G22000 Solyc06g073870.4 904 1438 1791 1726 2083 2085 2528 1874 1266 987 1751 1558 1576 1471 1507 DNA-directed RNA polymerase II subunit 4 (AHRD V3.3 *** A0A1U8HA52_CAPAN) AT5G09920 Solyc06g073880.3 1110 726 490 471 390 294 330 358 600 1019 491 531 742 657 372 E3 ubiquitin-protein ligase RHF2A (AHRD V3.3 *** A0A2G3CBJ5_CAPCH) AT5G22000 Solyc06g073890.3 456 255 312 271 149 209 180 157 275 276 349 217 365 259 421 E3 ubiquitin-protein ligase RHF2A (AHRD V3.3 *-* A0A2G3CBJ5_CAPCH) Solyc06g073900.3 782 975 990 1085 1323 1518 1298 1291 1102 921 1053 1262 907 1113 945 Succinate dehydrogenase subunit 6, mitochondrial (AHRD V3.3 *** A0A2G2XX03_CAPAN) AT1G08480 Solyc06g073910.4 26 60 62 81 77 121 127 46 50 35 78 56 67 61 38 Strictosidine synthase (AHRD V3.3 *** A0A200Q9R0_9MAGN) Solyc06g073920.3 1006 771 732 976 501 521 408 500 452 693 431 771 416 625 349 CRABS CLAW-like protein 2a AT1G08465 Solyc06g073930.4 429 549 662 575 656 763 654 702 605 547 600 532 569 641 577 Ubiquitin carboxyl-terminal hydrolase 8 (AHRD V3.3 *** A0A1U8HC37_CAPAN) AT5G22030 Solyc06g073940.4 481 498 630 761 161 209 140 151 261 500 717 608 603 633 585 protein FAF-like, chloroplastic (AHRD V3.3 *-* A0A2I4H6U5_9ROSI) Solyc06g073950.3 1064 428 629 487 465 516 390 343 535 449 823 417 495 456 807 DnaJ domain-containing protein (AHRD V3.3 *** A0A1Q3CPH7_CEPFO) AT5G22080 Solyc06g073960.4 1696 1395 1325 1156 1197 1380 1364 1334 1422 1198 1269 1146 1307 1344 1352 Serine/threonine-protein phosphatase (AHRD V3.3 *** I6WZC5_SOLTU) AT2G27210 Solyc06g073970.3 1059 964 693 1431 1464 1288 1463 1823 1094 1688 727 1530 927 1143 696 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MQ33_TRIPR) AT3G52060 Solyc06g073980.4 100 262 536 381 489 558 513 464 211 266 246 583 160 438 163 B3 domain-containing protein (AHRD V3.3 *** A0A2G2WMI9_CAPBA) Solyc06g073990.2 66 164 156 197 144 176 127 172 183 116 149 218 145 237 98 hypothetical protein (AHRD V3.3 *** AT5G06270.2) AT5G06270 Solyc06g074000.1 96 1221 702 869 1115 964 975 964 1567 600 1036 997 608 878 833 Eukaryotic aspartyl protease family protein, putative (AHRD V3.3 *** A0A061GZN2_THECC) AT3G52500 Solyc06g074010.3 999 567 571 563 529 469 647 389 439 465 604 541 396 566 406 Transcription factor E2FB (AHRD V3.3 *** A0A1U8H3C7_CAPAN) AT5G22220 Solyc06g074020.2 11 26 61 26 23 17 20 16 25 17 22 20 13 23 7 ovate family protein12 Solyc06g074030.1 3637 1837 2513 458 143 118 82 124 256 380 5834 1725 1000 753 2338 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1M9A7_ARTAN) AT3G44260 Solyc06g074040.2 65 57 108 140 59 50 34 54 64 91 106 55 45 59 76 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9SVC8_ARATH) AT3G44220 Solyc06g074050.3 1378 1829 1492 2532 2411 2022 2423 2364 1277 2798 1480 2211 1580 1761 825 Late embryogenesis abundant hydroxyproline-rich glycoprotein (AHRD V3.3 *** A0A2K3L117_TRIPR) AT2G27260 Solyc06g074060.2 0 5 6 2 3 7 7 3 2 2 15 12 4 16 1 Unknown protein Solyc06g074070.3 249 296 372 516 312 379 306 312 598 473 574 402 488 392 658 receptor-like kinase TMK3 (AHRD V3.3 *** A0A1S3XME2_TOBAC) Solyc06g074080.3 421 398 421 413 352 376 385 416 444 499 349 432 357 406 404 Histone deacetylase (AHRD V3.3 *** A0A2G2WMQ3_CAPBA) AT1G08460 Solyc06g074090.3 523 2585 1445 2052 1778 1409 1440 1820 6255 5428 3133 7762 3425 4052 2124 7-dehydrocholesterol reductase (AHRD V3.3 *** A0A2G2WMN4_CAPBA) AT1G50430 Solyc06g074100.1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aluminum-activated malate transporter 2 (AHRD V3.3 *** A0A2G3CBE1_CAPCH) Solyc06g074110.3 1844 3417 3088 3168 4387 4776 4851 4740 3981 1481 2420 3141 2277 3745 2755 Transcription factor (AHRD V3.3 *** A0A2G2WMH3_CAPBA) AT2G27230 Solyc06g074120.3 3677 1739 1403 2605 254 310 189 150 1116 1410 2321 738 1253 1187 3806 bell-like homeodomain protein 2 Solyc06g074130.4 389 397 352 484 436 468 497 447 448 364 464 507 519 433 539 Unknown protein Solyc06g074140.1 2 0 29 1 1 0 0 0 0 0 1 0 0 0 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CBE3_CAPCH) Solyc06g074150.3 0 0 0 0 0 1 0 1 0 0 0 8 0 0 0 Leucine-rich repeat family protein (AHRD V3.3 *** A0A061GNA0_THECC) Solyc06g074155.1 8 10 36 37 8 20 16 16 12 9 0 39 5 13 3 Unknown protein Solyc06g074160.3 5 69 103 117 76 109 70 107 54 43 42 109 21 105 31 B3 domain-containing protein (AHRD V3.3 *** A0A2G2WMI9_CAPBA) Solyc06g074170.3 108 96 99 130 133 113 84 98 78 82 135 121 68 109 137 NAC domain-containing protein 40 (AHRD V3.3 *** A0A2G2ZDN9_CAPAN) AT2G27300 Solyc06g074180.3 78 42 46 97 52 40 37 56 100 178 68 49 55 30 83 Cytochrome P450 (AHRD V3.3 *** A0A200R6R8_9MAGN) AT1G64950 Solyc06g074190.3 433 600 397 499 1021 1011 913 921 568 346 543 526 342 416 511 Plant/F24K9-26 protein (AHRD V3.3 *** A0A072UED0_MEDTR) Solyc06g074200.4 605 1321 818 1196 3086 2636 2561 3045 1335 1943 704 1243 782 421 601 Photosystem I subunit O (AHRD V3.3 *** A0A1U8H3A3_CAPAN) AT1G08380 Solyc06g074210.3 9445 4295 2550 5715 3302 2775 2966 3148 2207 6954 3381 3818 2288 3216 2379 mRNA-decapping enzyme-like protein (AHRD V3.3 *** A0A2G3CBG2_CAPCH) AT1G08370 Solyc06g074220.3 3383 1517 1489 1365 1351 1531 1329 1331 1343 1691 1473 1331 1355 1531 1924 OTU domain-containing protein (AHRD V3.3 *** A0A1Q3D2E3_CEPFO) AT2G27350 Solyc06g074230.3 0 1 13 0 0 1 1 1 1 1 0 0 5 2 0 Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_HELAN) Solyc06g074240.3 46 25 33 32 27 22 7 16 21 45 35 25 43 30 26 Beta-carotene,Pfam:PF05834 Solyc06g074250.3 1049 791 831 761 749 1025 778 812 726 1040 895 853 938 726 852 Vesicle-associated membrane protein (AHRD V3.3 *** A0A2G3CBC8_CAPCH) AT5G22360 Solyc06g074260.4 8806 9433 9102 9990 8521 7864 5403 7870 7759 11334 8950 14063 7352 9601 6344 senescence regulator (Protein of unknown function%2C DUF584) (AHRD V3.3 *** AT3G15040.1) Solyc06g074270.1 4 0 1 0 0 1 0 0 2 5 17 6 0 2 0 The fantastic four family (AHRD V3.3 *** A0A200QHM9_9MAGN) AT5G22390 Solyc06g074280.2 18 53 88 85 32 19 26 23 59 48 185 36 58 70 69 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A1J3I9U6_NOCCA) AT4G10720 Solyc06g074290.1 41 63 69 102 84 56 88 77 68 54 56 72 67 98 56 Unknown protein Solyc06g074300.4 2890 6141 5973 5075 7099 7770 7410 6645 3621 3485 4517 4463 7392 6540 4619 Ribosomal protein (AHRD V3.3 *** V4KXL5_EUTSA) AT1G08360 Solyc06g074310.4 578 559 672 865 784 937 868 719 679 712 841 819 625 656 796 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G2VAU9_CAPBA) AT1G08350 Solyc06g074320.3 129 128 177 201 282 339 237 299 176 92 146 250 47 114 65 Transcription factor TGA2 (AHRD V3.3 *** A0A2G3CAK2_CAPCH) AT1G08320 Solyc06g074330.3 447 434 386 536 592 870 905 577 426 375 511 473 367 423 561 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4J341_ARATH) AT3G44510 Solyc06g074340.3 0 5 2 6 26 31 20 29 10 3 3 26 4 1 7 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** B3H6Y0_ARATH) Solyc06g074350.3 149 149 161 150 702 692 635 478 337 353 271 462 391 134 58 self-pruning AT2G27550 Solyc06g074360.4 5 1 8 11 0 0 0 0 2 2 5 0 4 2 0 Zinc finger protein WIP3 (AHRD V3.3 *** A0A2G2ZDE0_CAPAN) Solyc06g074365.1 6 3 0 5 1 1 5 3 2 3 0 2 2 3 0 Unknown protein Solyc06g074370.3 100 188 214 246 360 407 361 322 219 165 174 265 208 185 151 Sialyltransferase-like protein (AHRD V3.3 *** Q4JEZ5_GOSRA) AT1G08280 Solyc06g074380.3 596 644 631 546 745 803 720 671 657 588 635 795 549 648 468 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT2G27590.1) AT2G27590 Solyc06g074390.3 226 990 633 713 955 997 989 966 1454 434 680 865 856 911 431 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A1U8H367_CAPAN) AT4G33790 Solyc06g074400.4 1320 989 692 686 605 668 561 696 625 890 678 608 778 822 754 Proteinaceous RNase P 2 (AHRD V3.3 *** A0A1U8H3H4_CAPAN) AT2G16650 Solyc06g074410.4 28 134 130 58 84 102 110 105 117 85 157 72 41 96 10 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A2G2ZDE3_CAPAN) Solyc06g074420.1 5 30 488 6 16 5 2 8 168 689 1475 48 50 47 55 Cytochrome P450 (AHRD V3.3 *** A0A200Q6A4_9MAGN) AT2G27690 Solyc06g074430.4 1881 4763 4748 3800 4496 4110 4197 3607 2806 2260 3616 2953 5617 5067 5272 60S acidic ribosomal protein P2 (AHRD V3.3 *** A0A2G2ZDK5_CAPAN),Pfam:PF00428 AT2G27710 Solyc06g074440.2 6 4 4 1 4 5 7 6 7 9 7 4 3 8 2 Phosphatidylinositol 3-kinase regulatory subunit P85-like protein (AHRD V3.3 *-* A0A327YLB5_9BACI) Solyc06g074450.3 1077 734 683 703 681 629 553 664 759 865 746 751 727 680 798 FRIGIDA-like protein (AHRD V3.3 *** A0A2G2ZDR9_CAPAN) Solyc06g074460.4 145 191 235 257 296 311 236 216 304 232 404 369 276 301 281 Peroxisomal membrane protein PEX16 (AHRD V3.3 *** A0A1U8H3H0_CAPAN) AT2G45690 Solyc06g074470.3 37 31 40 40 37 20 26 46 40 37 12 33 22 12 9 Unknown protein Solyc06g074480.3 692 568 643 641 585 570 520 461 608 573 589 613 390 558 552 Protein kinase G11A (AHRD V3.3 *** A0A2G2ZDD5_CAPAN) Solyc06g074490.1 633 724 1334 1329 1294 1493 1508 777 622 657 1288 654 990 928 1448 Unknown protein Solyc06g074500.2 41 7 2 6 11 5 8 4 11 19 12 16 10 18 25 DUF868 domain-containing protein (AHRD V3.3 *** A0A1Q3B4B3_CEPFO) AT2G27770 Solyc06g074510.4 223 182 195 147 283 239 282 204 207 168 163 198 124 174 121 Phosphoglycerate/bisphosphoglycerate mutase family protein (AHRD V3.3 *** A0A1P8BB43_ARATH) AT5G22620 Solyc06g074520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g074530.1 1491 2135 1256 1029 2823 2077 2002 2088 1350 1539 2759 1889 1419 1057 1394 Arogenate dehydratase (AHRD V3.3 *** A0A2G2VAY6_CAPBA) AT2G27820 Solyc06g074540.4 24 29 53 107 8 4 5 5 11 18 55 5 21 49 184 PHYTOSULFOKINE 3 PRECURSOR (AHRD V3.3 *-* AT3G44735.2) AT3G44735 Solyc06g074550.3 156 136 179 111 150 109 78 110 106 174 229 126 282 217 231 Unknown protein Solyc06g074560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g074570.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g074580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: uncharacterized protein LOC110639967 (AHRD V3.3 *-* XP_021646790.1) Solyc06g074585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Transmembrane protein (AHRD V3.3 *-* A0A1P8B2M8_ARATH) AT2G07674 Solyc06g074590.2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1J0PLB6_9DIPS) Solyc06g074600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* I6N947_DATST) Solyc06g074610.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc06g074620.3 981 409 502 168 45 64 34 47 111 314 651 281 429 280 590 hypothetical protein (AHRD V3.3 *** AT2G27830.1) AT2G27830 Solyc06g074630.4 123 426 276 393 548 542 524 578 549 393 323 393 442 388 317 Glucomannan 4-beta-mannosyltransferase 2 (AHRD V3.3 *** A0A2G3CAR5_CAPCH) AT5G22740 Solyc06g074640.2 25 21 50 26 21 27 29 29 17 8 5 36 14 22 4 PHD finger family protein (AHRD V3.3 *** F4KBB1_ARATH) Solyc06g074650.3 1925 2520 1704 1959 1899 2087 2300 2201 1936 1603 1598 1582 2537 2237 1862 AP-2 complex subunit alpha (AHRD V3.3 *** A0A1U8H352_CAPAN) AT5G22770 Solyc06g074670.4 988 1800 3029 1307 1799 1933 1819 2000 1454 1781 1668 1203 1512 953 949 UDP-apiose/UDP-xylose synthase (AHRD V3.3 *** A0A1B3TP38_SPIPO) AT1G08200 Solyc06g074680.4 34 24 0 7 0 9 1 0 3 16 1 0 3 5 18 Phospholipid:diacylglycerol acyltransferase 1 (AHRD V3.3 *** A0A2G2ZDG4_CAPAN) AT3G44830 Solyc06g074690.3 771 733 753 836 668 907 996 687 556 529 696 714 647 854 748 ARM repeat superfamily protein (AHRD V3.3 *** AT5G22820.3) AT5G22820 Solyc06g074700.4 1511 1272 1145 948 1043 1204 1139 1081 1111 1062 946 952 988 1363 1154 SRSF protein kinase 2 (AHRD V3.3 *** A0A2G3CAN3_CAPCH) AT3G44850 Solyc06g074710.1 36 13 5 31 7 3 3 3 22 29 5 1 6 10 138 Transferase (AHRD V3.3 *** A0A200R9R6_9MAGN) Solyc06g074720.4 18479 12091 10098 7594 4818 6123 4981 3674 5409 5671 7243 5132 11349 9942 12342 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A2U1LKA1_ARTAN) AT5G04600 Solyc06g074730.4 252 583 531 467 548 656 544 687 360 510 461 445 583 527 174 Argonaute 5 Solyc06g074740.3 913 984 852 954 1122 1109 1281 1332 1082 736 664 796 1115 1191 1139 LEU86662 VPS41 AT1G08190 Solyc06g074750.1 773 108 64 141 92 131 70 98 155 224 194 254 76 250 467 Histone H2B (AHRD V3.3 *-* A0A200R5C1_9MAGN) AT1G08170 Solyc06g074760.2 306 72 193 43 7 36 12 19 59 184 120 100 28 64 49 Ring/U-Box superfamily protein (AHRD V3.3 *-* F4IHN6_ARATH) Solyc06g074770.4 11 8 1 7 9 14 6 7 4 7 8 10 3 6 0 U box domain (AHRD V3.3 *** A0A200QNU0_9MAGN) AT5G15400 Solyc06g074780.1 450 1809 2518 2124 3244 3132 2799 3051 1365 1379 2076 2109 810 1662 1300 Histone H2B (AHRD V3.3 *** A0A2G2ZDH6_CAPAN) Solyc06g074790.2 236 3412 3210 2499 5353 4523 3904 5440 2481 1805 2558 3752 969 2433 1057 Histone H2B (AHRD V3.3 *** A0A2G3CAQ8_CAPCH) Solyc06g074800.1 26 31 6 40 15 19 11 16 25 22 24 27 29 24 9 Zinc finger protein (AHRD V3.3 *** A0A200R9U1_9MAGN) AT2G28200 Solyc06g074810.3 1068 786 748 745 527 643 679 687 637 794 537 699 546 742 665 Smg8/Smg9 (AHRD V3.3 *** A0A200R5I2_9MAGN) Solyc06g150134.1 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 Unknown protein Solyc06g074820.3 5720 37413 22758 18409 57495 43675 46355 62942 48186 30502 28738 50462 19415 21696 11867 tonoplast intrinsic protein 1.1 Solyc06g074840.3 343 312 448 339 328 450 279 312 345 307 354 304 378 352 323 Vacuolar sorting-associated protein 24-like (AHRD V3.3 *** A0A2K3P7F2_TRIPR) AT5G22950 Solyc06g074850.3 19 67 115 126 102 84 97 64 133 116 197 96 70 103 329 Carboxypeptidase (AHRD V3.3 *** A0A2G3CAN0_CAPCH) AT3G45010 Solyc06g074860.2 0 1 0 3 0 2 0 0 0 0 0 0 0 2 13 sister chromatid cohesion 1 protein 1 (AHRD V3.3 *-* A0A2I4EQY0_9ROSI) Solyc06g074870.3 11 2 11 7 0 3 4 1 12 1 0 4 5 4 42 sister chromatid cohesion 1 protein 1 (AHRD V3.3 *** A0A2I4EQY0_9ROSI) AT5G05490 Solyc06g074880.1 0 2 0 0 0 1 0 1 2 0 3 0 2 4 2 sister chromatid cohesion 1 protein 1 (AHRD V3.3 *-* XP_011076663.1) Solyc06g074890.1 204 345 440 347 408 438 490 415 357 289 299 257 390 338 375 bacterial trigger factor (AHRD V3.3 *** AT2G30695.3) AT2G30695 Solyc06g074900.3 148 262 219 145 288 282 217 223 228 130 158 153 216 219 180 bacterial trigger factor (AHRD V3.3 *** AT2G30695.3) AT2G30695 Solyc06g150135.1 75 47 70 62 9 68 56 36 60 43 62 35 33 60 91 Unknown protein Solyc06g074910.3 2 3 8 7 25 14 15 18 1 9 0 2 3 5 1 potato leaf AT5G23000 Solyc06g074920.3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 blind-like6 AT5G23000 Solyc06g074930.2 0 3 0 3 0 1 3 0 2 0 0 0 0 0 0 heavy metal-associated isoprenylated plant protein 3-like (AHRD V3.3 *** A0A1U8H726_CAPAN) AT5G60800 Solyc06g074940.4 1234 639 434 589 247 284 282 220 502 589 605 377 792 609 861 ATP-binding ABC transporter (AHRD V3.3 *** X8JTB2_9HOMO) AT5G60790 Solyc06g074950.1 3 22 3 5 3 6 3 10 43 10 18 12 0 7 4 Small auxin up-regulated RNA62 AT2G28085 Solyc06g074960.4 1376 880 1009 1068 931 964 1065 993 895 904 1032 924 787 908 730 Dolichol kinase (AHRD V3.3 *** A0A1J3I6T5_NOCCA) AT3G45040 Solyc06g074980.3 19589 11749 8717 8809 6940 6462 6686 7020 10251 10706 7798 8255 10351 10665 11448 Cell division cycle protein 48-like protein (AHRD V3.3 *** A0A1U8H311_CAPAN) AT5G03340 Solyc06g074990.3 2 0 5 0 1 4 2 2 0 2 12 0 0 0 1 putative high affinity nitrate transporter 2 AT1G08090 Solyc06g075000.3 78 55 49 66 65 79 62 73 58 51 48 50 80 57 68 MaoC_dehydratas domain-containing protein (AHRD V3.3 *** A0A1Q3B2J7_CEPFO) AT5G60335 Solyc06g075010.4 1529 2667 2375 2327 2802 2799 2590 2914 4530 3383 3510 4817 2965 3493 2920 60 kDa chaperonin (AHRD V3.3 *** B2IXD2_NOSP7) Solyc06g075020.3 1 24 10 20 29 31 27 34 40 23 17 38 15 21 13 ABC transporter G family member 24 (AHRD V3.3 *** A0A2G2ZDQ8_CAPAN) AT5G60740 Solyc06g075030.1 701 450 441 483 599 607 530 572 544 746 461 634 466 474 498 Protein kinase domain (AHRD V3.3 *** A0A200QI14_9MAGN) AT3G57120 Solyc06g075040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g075050.2 3 1 1 0 0 0 0 5 7 0 0 1 4 0 2 Alpha carbonic anhydrase 7 (AHRD V3.3 *** A0A2G2ZDJ3_CAPAN) Solyc06g075060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha carbonic anhydrase (AHRD V3.3 *** A0A2U1MX04_ARTAN) Solyc06g075070.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha carbonic anhydrase (AHRD V3.3 *** A0A2U1MX04_ARTAN) Solyc06g075080.4 1426 1611 904 1552 2020 1874 1937 2190 1123 2403 899 1576 1022 905 1046 NADH pyrophosphatase-like, NUDIX hydrolase domain-like protein (AHRD V3.3 *** A0A2U1PJU9_ARTAN) AT5G20070 Solyc06g075090.4 277 146 192 112 143 103 117 93 227 227 323 235 150 55 32 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** A0A2G3CAR7_CAPCH) Solyc06g075100.3 6 7 1 7 0 4 1 0 5 2 10 1 0 2 0 glycosyltransferase family protein 2 (AHRD V3.3 *** AT5G60700.2) AT5G60700 Solyc06g075110.3 1310 1162 1196 1180 1370 1228 1261 1008 1207 1098 1278 1060 940 1142 1461 Lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** A0A1P8AMP7_ARATH) AT1G08040 Solyc06g075120.1 0 2 0 1 0 0 1 0 0 1 0 0 0 0 0 Pleckstrin homology (PH) and lipid-binding START domains-containing protein (AHRD V3.3 *-* F4IHT0_ARATH) Solyc06g075130.4 13 40 145 66 27 47 66 39 34 45 31 28 48 88 40 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A1J3GYR1_NOCCA) AT2G28320 Solyc06g075140.3 0 5 25 20 41 28 35 28 23 12 15 15 10 16 3 GATA transcription factor 8 (AHRD V3.3 *** A0A2G2WNP8_CAPBA) Solyc06g075150.3 233 165 175 234 143 173 191 168 189 222 194 231 127 200 264 Auxin Response Factor 10B AT2G28350 Solyc06g075160.3 1640 1532 1016 1346 1232 1173 1166 1257 1296 1143 934 1088 1152 1318 967 SIT4 phosphatase-associated family protein (AHRD V3.3 *** A0A2U1PT03_ARTAN) AT1G07990 Solyc06g075170.1 489 165 95 136 296 176 213 211 170 404 196 217 137 104 154 Senescence regulator S40 (AHRD V3.3 *** A0A200QID2_9MAGN) AT5G60680 Solyc06g075180.1 1794 4858 4256 3090 4984 4722 4464 4383 3356 1899 3383 3204 6906 5527 4896 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) AT5G60670 Solyc06g075190.1 791 528 1118 718 597 813 607 474 489 628 1250 694 776 648 933 Methyltransferase-related protein (AHRD V3.3 *** A0A2K3LQ98_TRIPR) AT5G18150 Solyc06g075200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Putative membrane lipoprotein (AHRD V3.3 -** AT5G37474.1) Solyc06g075210.4 0 6 0 2 0 0 1 0 0 0 4 0 3 2 0 Protein disulfide-isomerase (AHRD V3.3 *** A0A2G2YHV6_CAPAN) Solyc06g075220.1 14 119 70 80 128 117 150 108 55 138 132 68 18 53 107 Fasciclin-like arabinogalactan protein 11 (AHRD V3.3 *** A0A2G2V1G2_CAPBA) AT5G03170 Solyc06g075250.3 951 1131 1005 1395 2007 1915 1811 1890 1671 919 1602 1275 1209 1307 1542 Zinc finger protein JACKDAW (AHRD V3.3 *** A0A1U8HBP2_CAPAN) Solyc06g075260.3 1 48 47 41 179 175 188 148 62 11 37 70 17 58 52 vicilin-like seed storage protein isoform X1 (AHRD V3.3 *** A0A2I4GN49_9ROSI) AT2G28490 Solyc06g075270.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vicilin-like protein antimicrobial peptides 2-2-like protein (AHRD V3.3 *** A0A2K3L823_TRIPR) Solyc06g075280.3 0 10 0 3 0 0 3 0 2 0 0 3 0 4 0 vicilin-like seed storage protein isoform X1 (AHRD V3.3 *** A0A2I4GN49_9ROSI) AT2G28490 Solyc06g075290.4 1 2 2 2 0 1 0 2 0 6 9 12 0 8 0 Vicilin-like protein antimicrobial peptides 2-2-like protein (AHRD V3.3 *** A0A2K3NI17_TRIPR) AT2G28490 Solyc06g075300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 Vicilin-like protein antimicrobial peptides 2-2-like protein (AHRD V3.3 *** A0A2K3L823_TRIPR) Solyc06g075310.4 417 154 218 86 56 46 44 21 89 154 205 64 197 158 204 Adenylate kinase isoenzyme 6 homolog (AHRD V3.3 *** A0A2G3CAY7_CAPCH),Pfam:PF13238 Solyc06g075320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 vicilin-like seed storage protein isoform X1 (AHRD V3.3 *** A0A2I4GN49_9ROSI) AT2G28490 Solyc06g075330.3 77 48 22 42 5 19 7 10 25 67 75 48 26 65 118 LOB domain-containing protein 1 (AHRD V3.3 *** A0A2G2WK78_CAPBA) Solyc06g075340.4 2417 3182 2404 2346 2471 2298 2224 2743 2816 2393 1996 2531 3218 3042 2507 Carbamoyl-phosphate synthase large chain-like protein (AHRD V3.3 *** A0A2K3P243_TRIPR) AT1G29900 Solyc06g075345.1 10 18 14 3 0 8 3 7 11 7 6 25 31 18 18 Unknown protein Solyc06g075350.3 177 148 169 171 134 131 110 85 87 78 103 107 219 219 229 tRNA-splicing endonuclease subunit Sen2-2 (AHRD V3.3 *** A0A2G2V1D0_CAPBA) AT3G45590 Solyc06g075360.3 993 591 1615 893 689 714 666 495 641 925 1564 738 1127 1056 1809 Tetraspanin-3 (AHRD V3.3 *** A0A1U8H2M6_CAPAN) AT3G45600 Solyc06g075370.3 807 916 547 763 1194 1111 971 1033 862 690 851 839 745 892 1174 Dof zinc finger protein (AHRD V3.3 *** A0A2K3LIE4_TRIPR) AT2G28510 Solyc06g075380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g075390.4 3246 2490 2159 2229 2288 2367 2180 2310 1852 2407 1983 2342 1849 1873 2123 Exosome complex component RRP43 (AHRD V3.3 *** A0A2U1QHR4_ARTAN) AT1G60080 Solyc06g075400.3 784 483 747 713 435 483 512 385 514 649 675 475 567 598 615 V-type proton ATPase subunit a (AHRD V3.3 *** A0A1U8H960_CAPAN) AT2G28520 Solyc06g075410.4 9 30 37 26 53 42 60 54 36 41 14 41 12 14 5 hypothetical protein (AHRD V3.3 *-* AT5G60150.2) Solyc06g075420.1 250 385 572 676 641 810 895 757 524 311 589 599 143 380 365 hypothetical protein (AHRD V3.3 *-* AT5G60150.2) Solyc06g075430.3 0 0 0 5 0 0 0 0 1 1 1 3 0 0 0 protein yippee-like (AHRD V3.3 *** XP_010322954.1) Solyc06g075440.3 40 38 25 100 4 6 0 3 49 30 59 59 77 25 40 protein NRT1/ PTR FAMILY 2.7-like (AHRD V3.3 *** A0A2I4HW78_9ROSI) Solyc06g075450.2 3 4 10 5 7 1 11 3 4 1 0 4 7 2 0 Protein NRT1/ PTR FAMILY 2.7 (AHRD V3.3 *** A0A2G3CB24_CAPCH) AT3G45680 Solyc06g075460.4 6 0 0 0 0 0 2 0 0 3 4 9 0 6 0 Protein NRT1/ PTR FAMILY 2.7 (AHRD V3.3 *-* A0A1U8H096_CAPAN) Solyc06g075470.3 0 0 1 0 0 0 2 0 1 0 0 0 0 0 0 Nucleoside diphosphate kinase (AHRD V3.3 *-* A0A2G2W2X3_CAPBA) Solyc06g075480.4 26 157 162 51 107 82 72 106 77 101 230 107 118 40 59 Protein NRT1/ PTR FAMILY 2.7 (AHRD V3.3 *** A0A1U8H096_CAPAN) AT3G45680 Solyc06g075490.1 5 8 0 6 3 8 1 1 3 3 0 3 0 1 0 Protein NRT1/ PTR FAMILY 2.7 (AHRD V3.3 *** A0A1U8H096_CAPAN) AT3G45680 Solyc06g075500.4 8 28 30 33 16 23 11 19 104 36 52 61 52 34 7 Protein NRT1/ PTR FAMILY 2.7 (AHRD V3.3 *** A0A1U8H096_CAPAN) AT3G45680 Solyc06g075510.4 89 360 186 445 800 822 835 626 534 280 454 470 288 285 315 APETALA2e AT2G28550 Solyc06g075520.3 29 23 59 27 3 6 5 2 30 47 61 34 19 7 34 Glutathione S-transferase (AHRD V3.3 *** A0A200PZB1_9MAGN) Solyc06g075530.1 192 52 9 10 1 10 3 3 24 66 18 9 38 24 25 Unknown protein Solyc06g075540.3 771 750 894 837 675 826 845 644 623 702 717 653 611 740 956 HAD-superfamily hydrolase (AHRD V3.3 *** A0A200R642_9MAGN) AT3G45740 Solyc06g075550.3 502 228 111 117 187 130 167 120 81 196 84 138 266 155 189 Receptor-like cytoplasmic protein kinase 1 (AHRD V3.3 *** F6JSQ7_CAPAN) AT1G07870 Solyc06g075560.2 0 1 0 0 0 3 0 1 0 0 0 0 0 0 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3BUE7_CEPFO) AT1G07850 Solyc06g075567.1 50 79 62 23 22 45 39 20 46 12 18 31 20 14 13 WUSCHEL-related homeobox 5 (AHRD V3.3 *** A0A2G2ZDR6_CAPAN) Solyc06g075570.2 0 0 0 0 2 4 2 5 1 0 3 3 0 5 6 Respiratory burst oxidase (AHRD V3.3 *** A0A2U1P7U6_ARTAN) AT5G60010 Solyc06g075580.4 95 765 927 1083 1819 1912 1773 2096 1159 556 846 1203 207 606 511 Kinesin (AHRD V3.3 *** A0A200R660_9MAGN) AT3G45850 Solyc06g075590.4 3966 3163 3593 4108 3199 3657 4165 3218 3039 3396 3302 3434 3071 3541 3982 NOT2/NOT3/NOT5-like protein (AHRD V3.3 *** A0A2U1KP40_ARTAN) AT1G07705 Solyc06g075600.3 13 99 57 67 49 80 84 64 84 40 68 67 23 50 70 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2G3CAY4_CAPCH) AT1G07710 Solyc06g075605.1 2 8 0 0 6 2 0 2 1 2 0 0 5 1 2 Unknown protein Solyc06g075610.1 268 301 501 298 231 353 268 286 340 211 253 258 192 158 334 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A2G2WNK6_CAPBA) Solyc06g075620.3 521 760 788 576 614 800 802 664 599 433 715 605 747 698 677 60S ribosomal protein L35 (AHRD V3.3 *** A0A2G2ZKJ8_CAPAN) AT2G39390 Solyc06g075630.4 2 31 19 28 41 27 23 36 37 25 5 35 7 13 10 Dirigent protein (AHRD V3.3 *** K4C9S8_SOLLC) AT1G07730 Solyc06g075640.2 34 163 142 251 353 390 337 401 207 124 179 180 39 126 160 Protein POLLENLESS 3-LIKE 1 (AHRD V3.3 *** A0A2G3CB18_CAPCH) AT4G20900 Solyc06g075650.3 3 14 32 11 14 40 51 42 62 25 0 10 14 12 10 tonoplast intrinsic protein 1.2 AT4G01470 Solyc06g075660.4 171 84 87 221 7 6 10 6 36 27 49 0 35 42 329 MYB transcription factor (AHRD V3.3 *-* B4FPU3_MAIZE) Solyc06g075670.1 17 9 6 7 0 0 0 0 3 0 3 2 5 1 33 MYB transcription factor (AHRD V3.3 *-* B4FPU3_MAIZE) Solyc06g075675.1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 6 Myb/SANT-like domain-containing protein (AHRD V3.3 *-* A0A2U1P375_ARTAN) Solyc06g075690.3 554 243 1241 159 91 114 68 105 207 386 616 232 180 282 188 auxin-regulated protein AF416289 AT5G59790 Solyc06g075700.2 0 0 5 0 4 7 0 2 0 1 1 1 0 0 0 Yippee family putative zinc-binding protein (AHRD V3.3 -** AT3G08990.3) Solyc06g075710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g075720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 protein yippee-like (AHRD V3.3 *** XP_025887510.1) Solyc06g075740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g075745.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g075750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein yippee-like (AHRD V3.3 --* XP_004242078.1) Solyc06g075770.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *-* X8JER5_9HOMO) Solyc06g075775.1 9 0 2 0 0 0 0 0 0 0 0 0 1 0 3 Zinc finger protein ZAT12 (AHRD V3.3 *** A0A2G3CB25_CAPCH) Solyc06g075780.3 712 161 361 101 2 3 5 0 21 23 750 116 156 129 174 Zinc finger protein (AHRD V3.3 *** A0A200PZ96_9MAGN) Solyc06g075790.3 2128 1227 1763 1615 1088 1299 1418 1024 1750 1846 1911 1895 1541 1626 1701 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein (AHRD V3.3 *-* A0A1I9LNX5_ARATH) AT5G59830 Solyc06g075800.1 596 4000 3702 3008 4405 4413 4265 4913 2629 1984 2330 3452 1838 3713 1433 Histone H2B (AHRD V3.3 *-* A0A1Q3BKM6_CEPFO) AT3G45980 Solyc06g075810.3 743 1247 1647 1411 1690 1808 1984 1626 1558 1063 1643 1370 1385 1466 1603 NADH-ubiquinone oxidoreductase subunit (AHRD V3.3 *** A0A166XFE7_9PEZI) AT5G47890 Solyc06g075820.1 4 0 12 1 10 11 1 6 4 2 0 0 3 2 0 Protein yippee-like (AHRD V3.3 *** A0A2I4FWI7_9ROSI) Solyc06g075830.2 339 1414 1810 1543 1854 2387 1957 2427 1019 1249 1778 2028 791 1261 944 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc06g075840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein yippee-like (AHRD V3.3 *-* XP_025887510.1) Solyc06g075850.1 272 1674 1650 2022 2065 2431 1934 2369 1002 1251 1478 2352 630 1349 546 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc06g075860.3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *-* A0A2I4FWI7_9ROSI) Solyc06g075870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein yippee-like (AHRD V3.3 *** XP_025887510.1) Solyc06g075880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 -** A0A2I0WXM3_9ASPA) Solyc06g075890.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *** A0A2I4F3E1_9ROSI) Solyc06g075900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A291F5N6_9ASTR) Solyc06g075910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *** A0A2I4FWI7_9ROSI) Solyc06g075920.2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 Protein yippee-like (AHRD V3.3 --* A0A2I4FWI7_9ROSI) Solyc06g075930.1 317 1471 1243 1365 1730 2340 1822 2666 1150 1389 1315 2765 536 1430 572 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc06g075940.1 0 0 4 0 0 0 1 0 2 0 0 0 0 0 0 Cell division cycle protein 48-like protein (AHRD V3.3 *-* A0A2G2XEX3_CAPBA) Solyc06g075950.2 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 Protein yippee-like (AHRD V3.3 *** B6T8M4_MAIZE) Solyc06g075960.1 2254 4811 5514 5290 6113 8218 6482 6748 3897 3648 5107 7320 2777 5156 3992 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc06g075970.4 0 0 25 48 0 1 0 0 0 1 0 0 0 1 14 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein (AHRD V3.3 *** A0A200R6L7_9MAGN) AT2G28780 Solyc06g075980.3 830 598 690 784 749 792 861 582 689 912 885 823 556 764 1270 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (AHRD V3.3 *** F4J934_ARATH) AT3G46450 Solyc06g075990.4 23 1 3 3 1 2 1 1 16 16 29 11 0 61 141 Glyoxalase-like domain (AHRD V3.3 *** A0A200R6M5_9MAGN),Pfam:PF18029 AT1G07645 Solyc06g076000.1 0 6 0 0 0 1 0 1 0 0 0 0 0 0 0 WUSCHEL-related homeobox 5 (AHRD V3.3 *** A0A2G2WNG2_CAPBA) AT5G59340 Solyc06g076010.3 150 141 326 200 287 306 288 202 184 178 292 228 196 183 302 hypothetical protein (AHRD V3.3 *** AT1G47278.3) AT1G47278 Solyc06g076020.3 1440 691 1229 217 195 195 153 162 332 297 2239 556 599 512 386 heat shock protein 70 kD Solyc06g076030.3 482 660 644 594 742 585 585 683 749 516 619 604 923 603 552 Dof zinc finger protein DOF2.2 (AHRD V3.3 *** A0A2G3CBK8_CAPCH) Solyc06g076040.3 876 528 1843 1115 401 449 421 395 563 890 1823 325 750 674 1123 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WNK7_CAPBA) AT3G46510 Solyc06g076050.4 222 232 448 290 199 153 201 101 164 255 345 174 249 292 224 Ankyrin repeat family protein, putative, expressed (AHRD V3.3 *** Q10NB7_ORYSJ) AT2G28840 Solyc06g076060.1 4 0 0 0 0 0 0 0 2 0 1 0 0 0 2 cyclin-dependent protein kinase inhibitor SMR3-like (AHRD V3.3 *-* A0A2I4FWF9_9ROSI) Solyc06g076070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g076080.3 264 69 323 24 5 0 0 0 9 39 224 76 34 34 84 Unknown protein Solyc06g076090.3 14 49 114 50 37 16 30 13 18 52 47 8 15 16 14 Actin (AHRD V3.3 *** A0A1U8H9K1_CAPAN) Solyc06g076100.3 521 437 468 425 214 208 203 236 365 500 447 374 489 374 405 Protein phosphatase 2C (PP2C)-like domain (AHRD V3.3 *** A0A200Q711_9MAGN) AT1G07630 Solyc06g076120.2 251 372 125 507 389 382 345 411 240 305 252 311 236 252 248 Fasciclin-like arabinogalactan protein 4 (AHRD V3.3 *** A0A2G2ZDY4_CAPAN) Solyc06g076130.3 515 204 97 101 36 32 18 28 46 68 90 12 188 237 299 GTP-binding Obg/CgtA protein (AHRD V3.3 *-* A0A2K3MSE1_TRIPR) Solyc06g076140.4 5327 8943 11706 11573 6005 5685 6325 4609 5968 4848 5671 4496 11339 8796 12855 Metallothionein-like protein (AHRD V3.3 *-* A8DUB1_SOLLC) Solyc06g076150.3 1222 1942 1702 1585 1588 1895 1804 1881 2116 1271 1691 1691 2247 2043 1727 Eukaryotic translation initiation factor 3 subunit C (AHRD V3.3 *** A0A2G3CBM0_CAPCH) AT3G56150 Solyc06g076160.4 21 7 38 51 6 1 5 3 54 26 296 68 14 47 39 Cytochrome P450 (AHRD V3.3 *** A0A200RCX6_9MAGN) Solyc06g076170.4 1 9 4 16 7 23 6 29 10 51 43 134 28 3 10 glucan endo-1,3-beta-glucosidase-like (AHRD V3.3 *** A0A2I4EV73_9ROSI) AT5G24318 Solyc06g076175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g076180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g076200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 XH/XS domain protein (AHRD V3.3 *** A0A2K3NYB8_TRIPR) Solyc06g076210.3 62 91 70 82 74 24 30 38 30 49 35 45 93 101 50 XH/XS domain protein (AHRD V3.3 *-* A0A2K3NYB8_TRIPR) Solyc06g076220.3 869 2524 2635 3026 4166 3925 3437 5302 2691 2164 2448 4181 3554 3310 2002 expansin18 AT2G28950 Solyc06g076230.1 82 46 53 67 82 64 91 64 58 69 31 61 35 37 76 Unknown protein Solyc06g076240.1 26 10 0 16 16 23 26 21 21 11 11 21 4 13 41 Unknown protein Solyc06g076250.4 598 416 311 548 471 587 549 387 397 482 546 372 353 442 349 PGR5-like protein (AHRD V3.3 *** A0A2K3NGZ6_TRIPR) AT5G59400 Solyc06g076260.3 120 346 338 404 442 473 499 331 253 220 351 273 431 428 405 Rab5-interacting family protein (AHRD V3.3 *** A0A2U1Q422_ARTAN) AT5G59410 Solyc06g076270.3 469 209 321 311 237 250 230 183 164 197 374 335 338 424 699 Telomere repeat-binding protein 2 (AHRD V3.3 *** A0A2G3CBM6_CAPCH) AT1G07540 Solyc06g076280.3 2198 1295 1091 870 687 705 719 796 1187 1282 1162 1007 1283 979 879 Transcription factor GRAS (AHRD V3.3 *** A0A2U1MZS4_ARTAN) AT1G07530 Solyc06g076290.1 45 46 65 15 21 16 26 37 24 13 6 30 25 39 23 Transcription factor GRAS (AHRD V3.3 *-* A0A2U1MZM3_ARTAN) Solyc06g076300.3 64 288 260 224 315 315 318 403 335 309 277 291 218 247 125 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1Q3B7_ARTAN) AT5G59480 Solyc06g076310.1 37 31 40 28 65 48 46 49 35 25 26 74 29 14 31 Cyclin-dependent protein kinase inhibitor SMR5 (AHRD V3.3 -** SMR5_ARATH) Solyc06g076320.1 46 28 8 22 38 33 50 49 28 21 14 8 6 5 2 DVL (AHRD V3.3 *** A0A2U1MHP2_ARTAN) AT1G07490 Solyc06g076330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 Laccase (AHRD V3.3 *** K4C9Z3_SOLLC) AT2G29130 Solyc06g076340.3 6587 3507 3190 3052 2326 2462 2474 2313 2602 3636 2714 3089 3481 3925 4196 Pumilio-like protein 1 (AHRD V3.3 *** A0A2G2WNK2_CAPBA) AT2G29190 Solyc06g076350.3 159 96 340 196 66 85 73 76 138 113 358 176 106 201 297 LePCL1 AT3G46640 Solyc06g076360.4 4664 6277 4666 4898 5431 4973 5324 6709 4786 4648 3938 6392 4918 5541 4076 Protein TOC75, chloroplastic (AHRD V3.3 *** A0A2G2ZEA8_CAPAN) AT3G46740 Solyc06g076370.4 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 low-temperature-induced protein (AHRD V3.3 *** AT3G46750.1) AT3G46750 Solyc06g076380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g076390.3 8219 4959 3640 3747 3773 3624 3464 4050 3516 5507 3264 4250 3696 4075 3883 Transcription initiation factor IIA subunit 1 (AHRD V3.3 *** A0A2G3CBK7_CAPCH) AT1G07470 Solyc06g076400.3 1332 374 183 462 89 60 80 74 383 420 557 335 313 453 1740 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1KC05_ARTAN) Solyc06g076410.4 717 889 734 857 1246 1069 1088 1149 857 969 823 937 734 638 779 Methylsterol monooxygenase 2-1 (AHRD V3.3 *** A0A1U8H2P4_CAPAN) AT1G07420 Solyc06g076420.1 0 7 4 1 15 13 32 25 0 2 19 12 21 0 0 extensin-like (AHRD V3.3 *-* XP_004242070.1) Solyc06g076430.3 2925 2215 1940 2157 1779 1775 1745 2095 1696 2886 1669 2419 1903 2055 1650 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A1U8HBG4_CAPAN) AT5G59160 Solyc06g076440.3 163 170 247 169 182 188 202 144 140 148 171 147 195 165 262 Metal tolerance protein B (AHRD V3.3 *** A0A1U8H9G9_CAPAN) AT2G29410 Solyc06g076450.3 151 139 97 92 57 35 36 31 59 58 91 43 125 114 98 Ras-related protein RABA2c (AHRD V3.3 *** A0A1U8H2Q8_CAPAN) AT3G46830 Solyc06g076460.4 600 728 973 901 1114 1017 950 927 956 849 886 959 867 875 769 Transcription elongation factor B polypeptide 1 (AHRD V3.3 *** A0A1U8H2N8_CAPAN) AT5G59140 Solyc06g076470.3 41 41 103 73 96 113 101 100 89 78 89 85 58 79 50 Plant/T7H20-70 protein (AHRD V3.3 *** G7L5L0_MEDTR) Solyc06g076480.4 564 362 547 594 528 518 501 399 476 455 632 394 318 342 634 Unknown protein Solyc06g076490.3 1915 773 357 522 186 206 144 184 370 532 416 291 650 517 649 serine/threonine-protein kinase pakD (AHRD V3.3 --* XP_021278037.1) AT5G59050 Solyc06g076510.3 96 290 224 235 384 337 365 446 316 264 224 318 250 266 198 Phosphoserine phosphatase, chloroplastic (AHRD V3.3 *** A0A2G3CBM8_CAPCH),Pfam:PF00702 AT1G18640 Solyc06g076520.1 1090 581 635 513 284 297 196 264 760 523 440 426 1111 669 704 Class I heat shock protein (AHRD V3.3 *** A0A2K3M3P7_TRIPR) AT2G29500 Solyc06g076540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Class I heat shock protein (AHRD V3.3 *** A0A2K3M3P7_TRIPR) AT2G29500 Solyc06g076550.4 0 0 0 0 0 0 0 3 0 0 0 1 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4FFY8_9ROSI) AT3G46660 Solyc06g076560.2 84 108 97 95 92 93 77 90 84 118 68 83 281 74 81 Class I heat shock protein (AHRD V3.3 *** A0A2K3M3P7_TRIPR) AT2G29500 Solyc06g076570.4 1006 605 928 729 808 673 642 759 1091 696 1021 974 617 515 629 Class I heat shock protein (AHRD V3.3 *** A0A2K3M3P7_TRIPR) AT2G29500 Solyc06g076580.1 2 12 2 9 15 15 10 29 3 4 4 9 0 9 0 Unknown protein Solyc06g076590.3 1657 1460 1198 1124 1420 1513 1338 1739 1317 1793 1306 1286 1171 1111 1499 DUF3527 domain-containing protein (AHRD V3.3 *** A0A1Q3C2Z3_CEPFO) AT5G59020 Solyc06g076600.2 45 47 35 44 27 33 34 33 11 27 7 13 29 23 14 Protein kinase domain (AHRD V3.3 *** A0A200R4T5_9MAGN) Solyc06g076610.3 376 364 392 466 474 518 501 490 474 528 456 442 365 318 611 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* B6SN54_MAIZE) AT5G59000 Solyc06g076620.3 196 393 344 296 329 301 402 300 253 216 275 327 490 478 424 28S ribosomal S34 protein (AHRD V3.3 *** Q9FHC3_ARATH) AT5G52370 Solyc06g076630.3 28 432 241 327 169 147 189 178 257 52 300 95 60 126 320 Peroxidase (AHRD V3.3 *** K4CA23_SOLLC) AT4G33420 Solyc06g076640.3 1901 10374 7564 9288 16414 11604 12211 18936 8917 7389 6818 12413 6846 9141 4620 Tubulin beta chain (AHRD V3.3 *** A0A1U8H9E6_CAPAN) Solyc06g076650.4 325 541 581 486 565 615 592 595 583 447 399 466 556 601 470 Enolase (AHRD V3.3 *** A0A2G3CBN8_CAPCH) AT2G29560 Solyc06g076660.3 394 3008 1630 1295 3443 2780 2802 3610 1897 1055 1001 2504 1972 2705 589 proliferating cell nuclear antigen AT2G29570 Solyc06g076670.3 5574 1736 2885 2204 1083 1282 1241 515 1014 1157 1911 1086 2039 2478 3357 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* A0A1P8AVT0_ARATH) AT1G07350 Solyc06g076680.4 46 62 105 41 100 93 103 68 64 75 130 68 67 95 80 Thioesterase superfamily (AHRD V3.3 *** A0A200R4R0_9MAGN) AT2G29590 Solyc06g076690.4 201 194 174 169 197 214 206 201 186 276 292 184 231 204 166 Thioesterase superfamily (AHRD V3.3 *** A0A200R4R0_9MAGN) AT2G29590 Solyc06g076700.1 331 813 791 853 1158 1193 1148 1352 1113 796 789 1125 682 820 475 UPF0503 protein, chloroplastic (AHRD V3.3 *** A0A1J3D8K5_NOCCA) Solyc06g076710.3 21 12 16 14 7 20 15 19 11 5 24 4 20 17 8 ELM2 domain (AHRD V3.3 *-* A0A200R4Q2_9MAGN) Solyc06g076740.3 0 0 0 7 4 1 14 2 5 6 3 5 1 1 4 ELM2 domain (AHRD V3.3 *-* A0A200R4Q2_9MAGN) Solyc06g076750.3 2889 1351 1241 967 751 712 813 802 1118 1674 1708 947 2370 1402 1478 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AP16_ARATH) Solyc06g076760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Laccase (AHRD V3.3 *** K4CA34_SOLLC) Solyc06g076770.3 2416 1162 1432 1527 762 935 756 789 1271 1525 2678 1654 1131 1589 3695 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G2ZE22_CAPAN) AT5G58900 Solyc06g076780.3 345 673 530 585 635 678 670 610 877 704 619 427 756 630 1057 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A2U1PL05_ARTAN) Solyc06g076790.1 137 352 368 189 616 589 505 567 354 268 329 255 230 162 305 Thylakoid soluble phosphoprotein TSP9 (AHRD V3.3 *-* A0A200Q7Q2_9MAGN) AT3G47070 Solyc06g076800.3 1 0 0 2 0 0 0 0 2 0 0 0 1 7 0 Cytochrome P450 (AHRD V3.3 *** A0A200R4M3_9MAGN) AT5G58860 Solyc06g076820.1 1130 1345 1053 2828 1932 1511 2126 2393 1560 3229 2264 1432 1265 1072 1223 Zinc finger family protein (AHRD V3.3 *** A0A2K3LSG6_TRIPR) AT2G29660 Solyc06g076825.1 4 10 1 17 4 7 12 18 7 10 1 9 0 17 0 Unknown protein Solyc06g076830.2 17 50 24 18 33 74 46 43 19 11 37 22 20 37 14 GDP-mannose transporter GONST2 (AHRD V3.3 *** A0A2G2ZE83_CAPAN) AT1G07290 Solyc06g076840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 119 AT5G58850 Solyc06g076850.3 1049 926 1354 1384 606 772 740 640 1619 1093 1208 1233 1230 1468 1380 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A1P8AMQ5_ARATH) AT2G29670 Solyc06g076860.4 15 336 208 219 442 401 520 450 352 113 177 363 176 357 104 Cell division control protein (AHRD V3.3 *** A0A1U8HBB9_CAPAN) AT1G07270 Solyc06g076870.4 40 127 319 226 228 290 191 261 59 278 36 325 32 145 42 60S acidic ribosomal protein P0 (AHRD V3.3 *** A0A1U8H2V8_CAPAN) Solyc06g076880.3 200 93 193 108 88 131 126 97 146 149 201 115 145 151 177 Quinone reductase (AHRD V3.3 *** F8WQS4_NICBE) AT5G58800 Solyc06g076890.1 724 521 601 458 557 514 380 586 502 715 591 567 674 497 423 Pleckstrin homology domain-containing protein 1 (AHRD V3.3 *** A0A1J3HUG8_NOCCA) AT2G29700 Solyc06g076900.4 201 115 81 85 62 99 94 92 83 125 116 108 94 111 160 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q7P3_9MAGN) AT2G29760 Solyc06g076910.3 3 4 19 11 10 18 4 26 13 30 8 22 10 2 1 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6P698_ACTCH) AT3G47110 Solyc06g076920.3 17 17 43 36 51 21 29 25 20 17 61 18 27 23 3 Alkyl transferase (AHRD V3.3 *** K4CA50_SOLLC) Solyc06g076930.2 0 2 0 9 0 1 3 11 2 9 0 3 3 4 0 ABC transporter-like (AHRD V3.3 *** A0A200PWT6_9MAGN) AT2G29940 Solyc06g076940.3 415 457 470 434 492 470 497 516 436 391 475 430 524 512 374 NudC domain-containing protein 2 (AHRD V3.3 *** A0A1J3GIH8_NOCCA) AT5G58740 Solyc06g076950.3 206 296 336 333 268 330 333 270 349 292 339 297 296 314 318 Inositol 3-kinase (AHRD V3.3 *** A0A2G3CBP8_CAPCH) AT5G58730 Solyc06g076960.2 175 76 85 87 90 65 57 62 58 65 55 86 67 113 165 Protein EARLY FLOWERING 4 (AHRD V3.3 *** A0A2G3CBN6_CAPCH) Solyc06g076965.1 96 41 64 47 23 31 38 24 31 54 14 13 17 30 16 Unknown protein Solyc06g076970.3 2577 3337 4669 3646 4121 4918 4240 4192 4680 3251 4451 3878 5250 5030 5193 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2G3CBN4_CAPCH) AT5G58710 Solyc06g076980.4 3 0 0 4 0 1 0 0 5 0 0 2 0 0 0 O-glucosyltransferase rumi (AHRD V3.3 *** A0A1J3EAC8_NOCCA) AT1G07220 Solyc06g081980.1 550 1512 781 1029 896 798 655 1252 1453 1741 438 1141 2116 1113 871 Pyridoxal 5'-phosphate synthase pdxS subunit (AHRD V3.3 *** U9T0K3_RHIID) AT5G01410 Solyc06g081990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g082000.4 97 81 138 54 67 101 70 37 63 77 133 63 25 75 118 PI-phospholipase C6 Solyc06g082010.4 6496 3201 3262 2833 767 851 843 637 2277 3577 4300 1210 2676 3232 4300 Zinc finger transcription factor 48 AT5G58620 Solyc06g082020.4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 protein PSY1 (AHRD V3.3 *** XP_004242520.1) AT5G58650 Solyc06g082030.3 13 6 24 13 3 8 8 19 32 12 40 24 8 17 11 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9LUZ1_ARATH) AT5G58660 Solyc06g082040.2 0 1 0 0 3 0 0 0 0 1 0 0 3 4 0 PHD finger transcription factor, putative (AHRD V3.3 *-* A0A061GW61_THECC) Solyc06g082050.2 0 0 0 0 0 0 0 0 0 5 0 0 6 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (AHRD V3.3 *-* G5DWM5_SILLA) Solyc06g082060.3 37 35 75 32 39 71 79 60 38 32 39 29 23 29 28 Unknown protein Solyc06g082070.3 164 1056 1350 975 1647 1868 2149 1467 1393 508 1014 1349 770 1191 395 Protein trichome birefringence-like 45 (AHRD V3.3 *** A0A2G3CBV9_CAPCH) AT5G58600 Solyc06g082080.3 631 736 510 689 864 870 700 974 560 540 642 837 459 542 472 Protein phosphatase 2C (AHRD V3.3 *** O24078_MEDSA) AT2G30020 Solyc06g082090.4 1458 3697 2452 2363 3265 3002 3051 3532 2625 1776 1982 2328 4064 3524 2120 Methionine aminopeptidase 2A (AHRD V3.3 *** A0A2I0WVF2_9ASPA) AT3G51800 Solyc06g082100.4 6355 5278 3592 3480 3647 3846 4127 4432 4965 4302 3107 4251 3750 4924 4072 Helicase (AHRD V3.3 *** A0A200PRA7_9MAGN) AT1G20960 Solyc06g082110.1 0 0 0 2 0 0 0 0 0 1 0 0 4 0 0 U5 small nuclear ribonucleoprotein helicase (AHRD V3.3 *-* A0A1Y1HYB3_KLENI) Solyc06g082120.4 627 777 670 638 767 739 831 772 718 437 659 543 941 784 705 Ran-binding protein 1 (AHRD V3.3 *** B6T9E7_MAIZE) AT1G07140 Solyc06g082130.3 0 0 1 3 0 2 1 3 6 0 1 3 4 5 2 Pyruvate decarboxylase (AHRD V3.3 *** A0A2K3PJA8_TRIPR) Solyc06g082140.3 2906 5083 6710 5972 7101 8566 8187 5424 3297 2982 5403 4330 6323 5586 6335 Unknown protein Solyc06g082150.4 997 487 458 473 330 360 341 358 511 474 517 381 439 555 532 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase (AHRD V3.3 *** A0A2G2XZJ1_CAPAN) AT1G07110 Solyc06g150136.1 0 43 18 37 152 149 229 141 50 33 7 22 4 11 25 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1Q188_ARTAN) Solyc06g082160.4 206 170 160 201 112 186 141 120 149 162 208 122 155 173 255 SAGA-associated factor 11 (AHRD V3.3 *** A0A2G2XZK1_CAPAN) AT5G58575 Solyc06g082170.2 142 146 145 285 258 227 168 254 156 299 178 241 185 116 139 Glutaredoxin (AHRD V3.3 *** A0A200PLS7_9MAGN) AT5G58530 Solyc06g082180.3 530 961 627 1095 1813 1403 1365 1980 885 1032 722 1332 794 774 439 Glutaredoxin (AHRD V3.3 *** A0A200PLS7_9MAGN) AT5G58530 Solyc06g082190.3 186 349 353 403 372 441 396 447 797 296 489 471 391 526 395 Protein kinase like protein (AHRD V3.3 *** Q0WN89_ARATH) AT5G58520 Solyc06g082200.4 477 487 486 674 515 577 627 517 832 435 504 589 471 556 571 Rab3 GTPase-activating protein catalytic subunit (AHRD V3.3 *** A0A200PLR8_9MAGN) AT5G58510 Solyc06g082210.1 138 131 160 174 263 214 223 192 179 157 209 182 117 126 156 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A1J3GXN6_NOCCA) AT1G07090 Solyc06g082220.4 1290 1725 1633 1326 1067 1333 1265 1201 1461 1239 1171 1342 2302 2277 1546 Transcription initiation factor TFIID subunit 15b (AHRD V3.3 *-* A0A2G3CBW1_CAPCH) AT5G58470 Solyc06g082225.1 2 0 1 5 8 4 1 1 8 4 13 0 9 6 9 Unknown protein Solyc06g082230.4 3 5 8 25 2 28 14 5 30 13 33 32 4 14 18 cation/H(+) antiporter 14-like (AHRD V3.3 *** A0A2I4FA29_9ROSI) AT1G06970 Solyc06g082240.2 0 1 1 23 0 0 0 0 15 0 10 10 12 22 29 Laccase (AHRD V3.3 *** K4CA83_SOLLC) AT2G30210 Solyc06g082250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Laccase (AHRD V3.3 *-* A0A1S3ZUA0_TOBAC) Solyc06g082260.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Laccase (AHRD V3.3 *-* A0A1U8H2F1_CAPAN) Solyc06g082270.2 918 1110 916 947 1013 1056 1023 1033 871 863 805 838 1229 988 867 Mitochondrial import inner membrane translocase subunit TIM17-like protein (AHRD V3.3 *** A0A2K3N0X5_TRIPR) AT2G37410 Solyc06g082275.1 48 67 32 46 68 52 64 65 59 62 38 77 78 87 34 Unknown protein Solyc06g082280.3 333 288 295 364 342 397 403 363 320 336 224 334 307 289 351 Calcineurin-like metallo-phosphoesterase superfamily protein (AHRD V3.3 *** A0A2U1MM52_ARTAN) AT1G07010 Solyc06g082290.4 740 1056 744 834 816 793 708 722 839 661 729 702 1018 999 712 Mitochondrial substrate carrier family protein (AHRD V3.3 *** O64731_ARATH) AT2G30160 Solyc06g082300.4 74 157 191 215 357 266 245 295 307 142 176 216 103 180 208 UDP-glycosyltransferase 87A1-like (AHRD V3.3 *** A0A2I4FAC3_9ROSI) AT2G30140 Solyc06g082310.3 0 0 0 0 1 2 0 5 4 0 0 13 0 0 0 LOB domain-containing protein (AHRD V3.3 *-* A0A2U1NCC4_ARTAN) AT2G30130 Solyc06g082320.4 15 17 9 20 17 26 21 23 20 26 29 30 30 34 29 hypothetical protein (AHRD V3.3 *** AT1G07060.3) AT1G07060 Solyc06g082330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200Q0Y7_9MAGN) Solyc06g082340.2 12 0 6 0 0 3 3 0 5 0 2 5 0 0 8 F-box protein (AHRD V3.3 *** A0A1J3JM96_NOCCA) Solyc06g082350.4 246 170 215 182 210 190 246 242 139 183 110 190 161 157 56 Unknown protein Solyc06g082353.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3J2T0_NOCCA) Solyc06g082357.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc06g082360.4 1994 3002 2806 2288 2695 2747 2547 2637 2095 1749 2341 2528 3515 3033 2825 U2 small nuclear ribonucleoprotein B (AHRD V3.3 *** A0A2U1L5Q9_ARTAN) AT2G30260 Solyc06g082370.4 2377 1778 1639 1529 1173 1233 1446 1097 1223 1380 1552 1256 1562 1555 1596 28S ribosomal protein S29, mitochondrial-like (AHRD V3.3 *** A0A2I4F9V5_9ROSI) AT1G16870 Solyc06g082380.3 245 217 363 187 197 242 197 157 211 280 351 209 323 187 165 protein LURP-one-related 7-like (AHRD V3.3 *** A0A2I4F9W5_9ROSI) AT2G30270 Solyc06g082390.4 4392 2543 3236 2813 3177 3145 3136 2695 2719 2748 3039 2732 2221 2362 3241 RNA-directed DNA methylation 4 (AHRD V3.3 *** A0A2I4FAA5_9ROSI) AT2G30280 Solyc06g082400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g082410.1 91 87 19 108 30 30 28 34 54 44 51 50 97 36 51 Major facilitator superfamily protein (AHRD V3.3 *-* A0A2U1QBS1_ARTAN) Solyc06g082420.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4CAA1_SOLLC) Solyc06g082430.2 5 0 0 0 0 0 0 0 4 0 9 0 0 2 2 LOB domain-containing protein 15 (AHRD V3.3 *** A0A2G2V4N5_CAPBA) AT2G30340 Solyc06g082440.1 226 84 216 73 20 15 18 7 87 89 195 80 96 120 504 Non-specific serine/threonine protein kinase (AHRD V3.3 *** G4XMX3_SOLLC) AT2G30360 Solyc06g082450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ovate family protein AT2G30395 Solyc06g082460.1 78 91 61 111 74 40 54 40 86 54 72 24 137 95 97 ovate family protein 14 AT2G30400 Solyc06g082470.3 1024 577 629 721 294 292 277 281 625 985 721 399 727 607 977 MAP kinase kinase kinase 42 AT5G58350 Solyc06g082480.3 874 568 563 406 418 458 420 395 459 621 433 396 541 571 425 PAP/OAS1 substrate-binding domain superfamily (AHRD V3.3 *-* F4J4G2_ARATH) Solyc06g082490.4 469 493 567 546 438 549 499 400 434 561 575 393 456 464 363 Alpha-1,3-mannosyltransferase ALG2 (AHRD V3.3 *** A0A2K3MSF9_TRIPR) AT1G78800 Solyc06g082500.3 289 450 333 491 459 450 509 372 335 314 425 265 468 437 562 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2K3PIW2_TRIPR) AT1G06890 Solyc06g082510.3 620 490 388 324 384 336 345 467 424 467 308 489 445 386 327 Myb_DNA-binding domain-containing protein (AHRD V3.3 *** A0A1Q3CLI1_CEPFO) AT1G15720 Solyc06g082520.3 760 696 597 562 463 510 522 541 726 772 900 482 1169 903 651 B3 domain-containing protein (AHRD V3.3 *** A0A2K3NLM2_TRIPR) AT2G30470 Solyc06g082530.3 33 1 7 9 11 11 8 5 14 5 2 7 4 6 14 Scarecrow-like protein 9 (AHRD V3.3 *** A0A1U8HB18_CAPAN) Solyc06g150137.1 415 2077 978 1026 2401 2241 1970 2467 1934 1904 850 2494 1308 1775 490 Cytochrome P450 (AHRD V3.3 *** A0A2U1MXM4_ARTAN) AT2G30490 Solyc06g082560.3 2 0 0 0 0 5 2 4 1 0 1 1 0 0 0 Chaperone protein ClpB (AHRD V3.3 *** A0A2U1LVY3_ARTAN) AT1G74310 Solyc06g082570.3 1450 1271 1625 1141 466 568 516 376 833 866 2314 583 1110 980 1153 protein NETWORKED 4B (AHRD V3.3 *** XP_004242479.1) Solyc06g082580.4 1901 2529 2648 2144 2139 2440 2172 1905 2207 1886 2047 2169 3113 2593 2386 Eukaryotic translation initiation factor 2 subunit beta (AHRD V3.3 *** A0A1U8H294_CAPAN) AT5G20920 Solyc06g082590.1 1731 765 755 401 90 117 97 56 314 280 860 175 1066 656 659 DNA-binding protein Pti6 Solyc06g082595.1 1580 1844 2544 2025 1664 1546 1637 1771 1982 1948 2412 2231 1980 1890 1503 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200PUP4_9MAGN) Solyc06g082610.4 562 1446 1507 1630 2396 2442 2487 2585 1661 1376 1639 1799 1062 1221 817 Receptor-like kinase (AHRD V3.3 *** G7K0V8_MEDTR) AT5G58300 Solyc06g082630.4 2061 2367 2425 2413 2711 2371 2341 2427 2204 2228 2022 2232 3146 2724 2471 26S protease regulatory subunit 6B-like protein (AHRD V3.3 *** A0A2G2WNW8_CAPBA) AT5G58290 Solyc06g082640.3 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 Shaggy-like protein kinase (AHRD V3.3 *** G5DXN5_SILLA) Solyc06g082650.4 1178 4451 4012 4103 4988 5041 5715 4587 2786 2395 3111 3378 5465 4460 4109 60S ribosomal protein L10 (AHRD V3.3 *** A0A2G2Z7S9_CAPAN) Solyc06g082660.4 3383 2501 1873 1686 1720 1532 1555 1897 1873 2186 1868 2050 2326 1979 1976 26S protease regulatory subunit 6B-like protein (AHRD V3.3 *** A0A2G2WNW8_CAPBA) AT5G58290 Solyc06g082670.3 1245 2656 2760 2339 3145 3116 3265 2962 1963 1654 2236 2154 3170 2708 2234 60S ribosomal protein L10 (AHRD V3.3 *** A0A2G2Z7S9_CAPAN) AT1G26910 Solyc06g082680.4 482 577 798 649 802 694 741 608 548 426 653 533 787 700 495 Cytochrome b-c1 complex subunit 8 (AHRD V3.3 *** A0A1U8H2J1_CAPAN) AT5G05370 Solyc06g082690.1 1 10 1 10 3 10 6 12 9 2 7 8 9 4 11 Unknown protein Solyc06g082700.1 15 9 34 20 33 26 23 13 15 37 14 12 27 61 16 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1QFD7_ARTAN) Solyc06g082710.4 689 713 563 704 756 737 851 672 758 531 585 637 653 651 652 KH domain-containing protein (AHRD V3.3 *** A0A2G3CBS8_CAPCH) Solyc06g082730.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200RC30_9MAGN) Solyc06g082740.3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Reticulon-like protein (AHRD V3.3 *** A0A2G2WP42_CAPBA) Solyc06g082750.3 275 1188 1121 890 1281 1061 1238 1320 1026 673 1016 838 779 995 851 50S ribosomal protein L17 (AHRD V3.3 *** A0A1U8H2A3_CAPAN) AT3G54210 Solyc06g082760.4 34 178 204 155 272 212 289 265 177 126 125 190 174 180 153 50S ribosomal protein L17 (AHRD V3.3 *** A0A1U8H2A3_CAPAN) AT3G54210 Solyc06g082770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein 4 (AHRD V3.3 *** A0A2G3CBT6_CAPCH) Solyc06g082780.4 301 237 358 256 227 268 287 211 169 226 515 198 231 215 241 Calcium uniporter protein 5, mitochondrial (AHRD V3.3 *** A0A2G2WNX4_CAPBA) AT1G09575 Solyc06g082790.1 0 3 0 0 0 0 0 0 0 0 0 0 3 0 0 Pentatricopeptide repeat protein (AHRD V3.3 *-* A0A2U1LZJ7_ARTAN) Solyc06g082793.1 838 1236 1277 839 982 922 960 847 774 742 856 927 1432 1290 1094 Mitochondrial import receptor subunit TOM40-1 (AHRD V3.3 *** A0A2G3CBS4_CAPCH) AT3G20000 Solyc06g082797.1 4 4 0 1 0 0 0 5 0 6 4 1 3 5 2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X387_9ASPA) Solyc06g082810.3 838 571 663 618 798 751 742 789 582 609 594 634 597 468 616 Oligoribonuclease (AHRD V3.3 *** A0A2G2ZEC5_CAPAN) AT2G26970 Solyc06g082820.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MLO-like protein (AHRD V3.3 *** K4CAD7_SOLLC) Solyc06g082830.3 3766 2154 2754 2261 1755 1915 1925 1381 1950 1627 2634 1699 2309 1988 3626 hypothetical protein (AHRD V3.3 *** AT3G07580.1) AT5G48335 Solyc06g082840.4 5783 4375 4321 4159 3237 3518 3552 3166 4557 3469 4627 2966 3742 3992 6245 Chaperone DnaJ-domain superfamily protein (AHRD V3.3 *-* F4JRF7_ARATH) AT4G12780 Solyc06g082850.4 13 153 131 192 296 300 342 303 150 68 116 182 27 93 98 myelin transcription factor (AHRD V3.3 *** AT5G01910.2) AT5G01910 Solyc06g082860.4 0 24 16 24 60 43 28 39 23 11 11 33 11 24 9 Cytochrome and DOMON domain-containing protein (AHRD V3.3 *** A0A2G2ZEL3_CAPAN) AT3G07570 Solyc06g082870.4 8313 12536 11120 9126 11266 10740 11186 10724 7678 6756 8623 8301 12669 10889 10466 60S ribosomal protein L5 (AHRD V3.3 *** A0A2I4H863_9ROSI) AT3G25520 Solyc06g082880.2 43 71 67 53 47 62 48 56 61 31 70 26 85 105 76 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2ZEA4_CAPAN) AT3G02330 Solyc06g082890.4 150 313 257 215 311 300 351 295 235 276 259 267 275 277 242 Ribonuclease 2 (AHRD V3.3 *** A0A2G3CBX2_CAPCH) AT2G39780 Solyc06g082900.3 1030 894 833 705 722 814 709 629 781 650 909 560 894 956 1062 Mediator of RNA polymerase II transcription subunit 19a (AHRD V3.3 *** A0A1U8H8Z5_CAPAN) AT5G12230 Solyc06g082910.3 2708 5728 6173 8005 8605 7111 7552 11080 8773 9873 6547 9540 5169 5271 3209 Formin-like protein (AHRD V3.3 *** A0A2G3CBV0_CAPCH) AT3G25500 Solyc06g082920.3 2058 1237 1533 845 550 565 537 573 1052 1744 1585 873 1848 1285 1049 Receptor-like kinase (AHRD V3.3 *** D4QD70_DIACA) AT5G48380 Solyc06g082930.3 12096 9961 11672 10243 11206 11731 10841 11604 10923 11215 11013 10814 10943 10434 10291 FRIGIDA-like protein (AHRD V3.3 *** A0A2G3CBV4_CAPCH) AT5G48385 Solyc06g082940.3 1782 4670 3747 3687 7661 6493 6356 7430 5205 4819 3669 4696 3122 2445 2764 Photosystem I reaction center subunit XI protein (AHRD V3.3 *** A0A2U1MVK5_ARTAN) AT4G12800 Solyc06g082950.4 840 1090 1083 1052 1670 1365 1329 1530 1602 1695 1281 1182 853 633 1341 Photosystem I reaction center subunit XI protein (AHRD V3.3 *** A0A2U1MVK5_ARTAN) AT4G12800 Solyc06g082960.3 23 98 125 121 39 49 34 33 81 118 242 57 100 88 106 Maternal effect embryo arrest protein (AHRD V3.3 *** Q94K16_ARATH) Solyc06g082970.3 262 410 401 385 491 342 403 384 468 316 322 388 299 333 297 Chaperone DnaJ-domain superfamily protein (AHRD V3.3 *** A0A0F7H181_9ROSI) AT5G21430 Solyc06g082980.3 2074 4964 5169 6011 6058 7228 6285 6127 8854 8378 11442 13110 4948 6887 7199 Emopamil-binding (AHRD V3.3 *** A0A2U1L1I9_ARTAN) AT1G20050 Solyc06g082990.4 909 471 519 459 462 417 418 334 510 531 568 496 373 453 589 RNA-binding CRS1 / YhbY (CRM) domain protein (AHRD V3.3 *** A0A2U1N3C5_ARTAN) AT3G25440 Solyc06g083000.1 3 11 15 1 2 7 5 2 19 14 50 8 6 5 0 Calmodulin-like protein 5 (AHRD V3.3 *** A0A2G2WMY5_CAPBA) Solyc06g083005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g083010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g083020.3 0 6 7 15 22 25 24 28 21 2 8 12 12 5 17 Carboxypeptidase (AHRD V3.3 *** A0A2G2WN52_CAPBA) AT4G12910 Solyc06g083030.3 122 412 379 350 456 408 416 473 741 340 449 595 520 502 314 Carboxypeptidase (AHRD V3.3 *** A0A2G2WN52_CAPBA) AT4G12910 Solyc06g083040.3 123 451 455 351 254 299 286 278 859 409 343 633 178 339 217 wound-inducible carboxypeptidase AT4G12910 Solyc06g083050.3 0 3 0 2 0 2 4 0 0 1 1 1 0 0 0 Carboxypeptidase (AHRD V3.3 *** A0A2G2WN52_CAPBA) AT4G12910 Solyc06g083060.4 304 159 180 144 69 114 104 112 128 104 156 61 163 186 120 MIP18 family protein (AHRD V3.3 *** A0A2G3CCB8_CAPCH) Solyc06g083070.3 994 1363 1223 1709 1806 1782 1928 1732 2145 1204 2182 1786 805 774 1733 Fimbrin-2 (AHRD V3.3 *** A0A2G2WN11_CAPBA) AT5G48460 Solyc06g083080.3 226 555 801 618 1104 915 811 965 590 360 588 777 664 789 926 Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein (AHRD V3.3 *** Q8LEL0_ARATH) AT5G48500 Solyc06g083090.4 720 918 779 960 1133 954 994 1084 873 811 635 912 746 825 615 HAUS augmin-like complex subunit 3 (AHRD V3.3 *** A0A2U1LF87_ARTAN) AT5G48520 Solyc06g083100.2 25 86 83 80 84 111 113 63 56 39 77 79 42 63 36 HAUS augmin-like complex subunit 3 (AHRD V3.3 *** A0A2U1LF87_ARTAN) AT5G48520 Solyc06g083110.2 1443 2884 1291 2024 2130 1767 1915 2349 1391 1789 1124 2168 3046 2680 1434 YGGT family protein (AHRD V3.3 *** A0A2U1KB47_ARTAN) AT4G27990 Solyc06g083120.1 1 1 1 2 0 0 0 0 0 0 0 0 0 1 4 Unknown protein Solyc06g083130.4 3 26 42 22 51 48 21 27 28 23 16 33 16 39 23 dCTP pyrophosphatase 1 (AHRD V3.3 *** A0A2G2ZE82_CAPAN) AT3G25400 Solyc06g083140.4 0 3 3 25 5 17 5 11 5 7 0 6 7 36 0 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *-* A0A200PTS7_9MAGN) Solyc06g083150.3 709 378 496 377 323 308 330 277 402 475 495 339 347 377 441 U box domain (AHRD V3.3 *** A0A200Q5S3_9MAGN) AT3G07370 Solyc06g083160.1 4 5 0 4 13 7 14 6 3 12 0 1 12 3 17 DUF506 family protein (DUF506) (AHRD V3.3 *** O48807_ARATH) AT3G07350 Solyc06g083170.3 70 189 241 206 321 248 283 257 208 164 204 227 165 223 175 bHLH transcription factor 049 Solyc06g083180.4 2209 5710 5085 4059 5571 5356 5705 5275 3655 2817 3352 3694 6158 5318 3612 40S ribosomal protein S8 (AHRD V3.3 *** A0A1U8H236_CAPAN) AT5G20290 Solyc06g083190.4 4590 4171 3554 2744 2728 2346 2444 2911 3298 2437 2179 2827 4779 4258 3588 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G3CCB5_CAPCH) AT3G25230 Solyc06g083200.3 651 502 280 392 429 372 388 466 315 541 274 431 388 425 227 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q3F8_9MAGN) AT3G25210 Solyc06g083210.3 1300 598 638 928 555 605 562 438 563 929 604 620 480 620 1008 Serine/threonine-protein kinase MHK (AHRD V3.3 *** A0A2G3CC93_CAPCH) AT4G13020 Solyc06g083220.3 1682 835 669 1012 661 689 739 604 684 774 728 833 689 724 1120 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2K3MR94_TRIPR) AT4G13030 Solyc06g083230.3 340 436 433 512 429 485 486 409 414 326 472 296 391 319 330 GTP cyclohydrolase 1 AT3G07270 Solyc06g083240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g083250.4 198 314 349 440 344 376 337 343 314 350 283 386 397 399 357 Unknown protein Solyc06g083260.3 1648 765 856 752 674 673 631 617 831 1052 890 815 866 931 855 cyclin1_1 AT5G48640 Solyc06g083270.3 108 189 107 135 155 155 119 170 233 131 71 261 358 270 125 ER lumen protein retaining receptor (AHRD V3.3 *** A0A200QBW0_9MAGN) AT3G25160 Solyc06g083280.2 10 12 18 0 3 8 2 0 5 5 3 9 12 33 4 ER lumen protein retaining receptor (AHRD V3.3 *** A0A200QBW0_9MAGN) AT3G25160 Solyc06g083290.1 21 2 0 2 0 7 2 4 8 9 8 0 0 3 30 Ninja (AHRD V3.3 *-* A0A200QBQ2_9MAGN) Solyc06g083300.4 4281 4777 3084 2945 3918 4200 3831 4268 3426 3481 3018 3458 4644 3876 2660 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *** F4J8X6_ARATH) AT3G25150 Solyc06g083310.3 1413 2042 2754 1905 2329 2071 2000 2171 2152 2182 2914 2018 1870 1808 2289 Hexosyltransferase (AHRD V3.3 *** A0A1U8H237_CAPAN) AT3G25140 Solyc06g083320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g083330.2 14 18 53 56 4 26 6 4 19 34 82 32 23 32 91 acidic leucine-rich nuclear phosphoprotein 32 family B protein (AHRD V3.3 *-* AT3G25130.1) Solyc06g083340.3 507 972 1555 956 1306 1428 1442 1104 893 652 1134 956 1581 1311 1280 Wound-induced basic protein (AHRD V3.3 *** A0A1U8H216_CAPAN) AT3G07230 Solyc06g083350.3 635 503 416 476 464 464 410 466 415 524 487 491 618 551 444 FHA domain-containing protein (AHRD V3.3 *** A0A1Q3BS28_CEPFO) AT3G07220 Solyc06g083360.3 1136 928 1274 1348 1456 1596 1640 1300 962 910 1443 1143 1238 1097 1344 DNA-directed RNA polymerases I/II/III subunit (AHRD V3.3 *** A8HSJ0_CHLRE) AT1G11475 Solyc06g083370.3 87 143 256 150 181 224 260 207 200 81 221 134 178 167 153 hypothetical protein (AHRD V3.3 *** AT3G07210.1) AT3G07210 Solyc06g083380.3 344 692 643 604 651 666 661 753 755 485 533 645 741 678 489 Acyl-[acyl-carrier-protein] hydrolase (AHRD V3.3 *** A0A2G2WN18_CAPBA) AT4G13050 Solyc06g083390.4 1534 746 809 646 310 200 240 273 608 1140 1258 418 855 683 823 RPM1-interacting protein 4 (AHRD V3.3 *** A0A1P8SF00_NICBE) AT3G25070 Solyc06g083400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A1Q3BRV6_CEPFO) Solyc06g083410.4 795 660 755 812 1230 1119 1153 1052 819 829 843 796 856 660 556 protein XRI1 (AHRD V3.3 *** A0A2I4G9Z5_9ROSI) AT5G48720 Solyc06g150138.1 617 293 346 253 387 388 447 249 168 136 135 192 350 398 227 Unknown protein Solyc06g083420.3 4693 3742 3581 4105 3319 3684 3928 3702 3688 3729 3721 3676 3236 3971 3652 Helicase/SANT-associated DNA-binding protein (AHRD V3.3 *** A0A2K3NM86_TRIPR) AT3G24870 Solyc06g083430.1 240 377 358 516 419 414 379 493 477 461 301 521 589 478 225 Trihelix transcription factor ASIL2 (AHRD V3.3 *** A0A1J3H1F5_NOCCA) AT3G24860 Solyc06g083440.3 159 777 1038 1129 1549 1991 1711 1288 889 734 1141 1260 874 1057 853 Cytochrome b5 (AHRD V3.3 *** A0A2G3CCB6_CAPCH) AT2G32720 Solyc06g083450.4 5 8 11 8 31 43 23 15 10 16 8 4 34 7 4 O-methyltransferase family protein (AHRD V3.3 *** F4IB88_ARATH) Solyc06g083460.4 2364 2162 2032 1586 1801 1677 1667 2045 2490 1735 1981 1730 1678 2113 1708 Transcriptional corepressor LEUNIG (AHRD V3.3 *** A0A1U8H8S8_CAPAN) AT2G32700 Solyc06g083470.4 2 192 352 396 308 250 315 206 175 87 178 195 62 408 138 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IKL5_ARATH),Pfam:PF13561 Solyc06g083480.4 23 209 107 162 393 495 411 465 241 94 70 258 20 145 3 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A1P8AYK7_ARATH) Solyc06g083500.4 9 22 61 18 25 29 23 19 19 21 80 28 17 49 44 Serine/threonine-protein kinase PBS1 (AHRD V3.3 *** A0A2G2WN41_CAPBA) AT3G07070 Solyc06g083505.1 303 248 228 151 193 197 200 165 222 166 185 158 369 300 227 DNA-directed RNA polymerase III subunit (AHRD V3.3 *-* B6TLW8_MAIZE) AT4G01590 Solyc06g083520.3 2083 1169 831 685 496 521 517 452 701 618 827 698 1045 1035 1172 Nucleolar GTP-binding protein 2 (AHRD V3.3 *-* A8PTQ1_MALGO) AT3G07050 Solyc06g083530.3 767 1208 1828 1291 2028 2007 1785 1932 1514 1179 1900 1455 1429 1250 1329 Vesicle-associated membrane protein (AHRD V3.3 *** A0A1U8H291_CAPAN) AT1G04760 Solyc06g083540.4 1393 2024 1768 1309 1857 1594 1386 1801 1361 1233 1186 1698 2620 2246 1327 Alba DNA/RNA-binding protein (AHRD V3.3 *-* A0A1I9LSC0_ARATH) AT3G07030 Solyc06g083550.1 174 133 118 171 154 205 185 168 173 172 144 169 150 161 102 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1J3IAF9_NOCCA) AT3G24760 Solyc06g083560.3 4 5 3 0 1 5 2 4 10 2 5 10 2 3 13 hypothetical protein (AHRD V3.3 *** AT3G24750.1) AT3G24750 Solyc06g083570.3 461 331 437 344 268 372 357 252 264 290 390 352 309 338 419 Thioredoxin-like protein 4B (AHRD V3.3 *** A0A1U8H1Y8_CAPAN) AT3G24730 Solyc06g083580.4 370 750 1066 1926 1030 1164 1170 1094 919 1457 2553 1278 509 501 1659 Pectate lyase (AHRD V3.3 *** A0A2G3CC63_CAPCH) AT5G48900 Solyc06g083590.4 4 0 4 0 0 0 0 0 0 0 1 0 3 0 0 ABI3 AT3G24650 Solyc06g083600.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing transcription factor FUS3 (AHRD V3.3 *** A0A1U8H1Y6_CAPAN) AT3G24650 Solyc06g083610.3 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 Late embryogenesis abundant protein (LEA) family protein (AHRD V3.3 *** AT4G13230.1) AT4G13230 Solyc06g083620.3 3649 4907 4159 3888 4733 4673 4957 5067 5450 4136 3582 4812 5792 5166 4496 26S proteasome regulatory subunit (AHRD V3.3 *** A8IHB3_CHLRE) AT4G29040 Solyc06g083630.4 547 646 575 591 639 616 645 624 596 628 546 567 706 605 650 Integral membrane HRF1 family protein (AHRD V3.3 *** Q94BQ9_ARATH) AT1G30890 Solyc06g083640.4 2467 1741 2217 1791 1181 1653 1577 1139 1156 1592 1929 1277 2049 1927 2116 RNI-like superfamily protein (AHRD V3.3 *** F4IUG1_ARATH) AT2G20210 Solyc06g083650.3 115 171 209 329 3 10 5 5 234 133 367 172 290 198 652 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3CC50_CAPCH) Solyc06g083660.4 928 1679 1586 1657 2010 1996 2042 2277 2398 2143 1558 2004 1344 1432 1229 Methyl-coenzyme M reductase II subunit gamma, putative (DUF3741) (AHRD V3.3 *** Q949M4_ARATH) AT4G28760 Solyc06g083670.4 671 543 611 669 976 991 1011 955 561 629 603 838 478 565 577 Unknown protein Solyc06g083680.3 2257 3114 1934 2546 6549 4172 4387 5370 2789 3600 2269 3035 1891 1712 1897 Photosystem I reaction center subunit IV (AHRD V3.3 *-* A0A2P6U4S6_CHLSO) AT2G20260 Solyc06g083690.3 105 271 181 200 330 271 317 303 294 176 214 246 243 226 212 Glutaredoxin-C5, chloroplastic (AHRD V3.3 *** A0A2G2WN59_CAPBA) AT4G28730 Solyc06g083700.4 0 1 23 58 0 17 7 8 3 2 2 2 1 18 8 Flavin-containing monooxygenase (AHRD V3.3 *** D2IGV4_SOLLC) AT5G43890 Solyc06g083705.1 48 27 25 18 53 39 35 47 32 52 15 32 16 22 21 Unknown protein Solyc06g083710.3 377 201 280 274 289 379 361 289 233 240 179 319 134 176 187 DENN domain-containing protein (AHRD V3.3 *** A0A1Q3CVA6_CEPFO) AT2G20320 Solyc06g083720.2 1 13 0 8 4 11 11 4 19 14 25 8 0 14 0 Subtilisin-like protease SBT1.2 (AHRD V3.3 *** A0A2G3CC46_CAPCH) AT1G04110 Solyc06g083730.3 1138 1750 973 980 1358 1295 1342 1621 1205 1137 813 1169 1829 1422 1136 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *** F4K7E0_ARATH) Solyc06g083750.3 194 267 285 200 195 176 163 212 224 203 162 212 279 279 150 Cysteine-rich repeat secretory protein 11 (AHRD V3.3 *** A0A2G2ZEJ6_CAPAN) Solyc06g083740.1 30 36 45 59 46 65 76 53 29 19 69 55 44 59 62 Unknown protein Solyc06g083760.3 2249 1884 2154 2095 1888 2238 2210 2153 2106 2384 2168 2309 1575 2007 2081 Histone-lysine N-methyltransferase SUVR1 (AHRD V3.3 *** A0A2G3CC74_CAPCH) AT5G43990 Solyc06g083770.4 404 435 398 448 461 325 349 358 370 550 440 494 467 356 254 Glutathione S-transferase (AHRD V3.3 *** A0A200RBA5_9MAGN) AT5G44000 Solyc06g083780.3 2734 6066 6260 5029 6959 7114 6829 6515 4102 3247 4964 4744 7082 6064 5424 Ribosomal protein L17 (AHRD V3.3 *** Q5I7K4_WHEAT) AT2G33370 Solyc06g083790.3 1480 3134 2246 2204 2955 2401 2523 3119 2670 2179 1811 2593 3678 3024 2090 succinyl CoA ligase beta subunit AT2G20420 Solyc06g083800.4 31 19 46 27 5 34 16 33 49 25 41 31 32 21 60 CRIB domain-containing protein RIC6 (AHRD V3.3 *** A0A2G3CC56_CAPCH) AT4G28556 Solyc06g083810.3 448 802 1073 923 718 681 773 764 1167 820 786 646 1125 945 1139 Glycolipid transfer protein domain (AHRD V3.3 *** A0A200QEY9_9MAGN) AT2G33470 Solyc06g083820.3 955 3112 2612 1818 3176 2950 2651 2893 2195 1771 2037 2219 3844 2930 2243 Ribosomal protein L14 (AHRD V3.3 *** A0A200PVX1_9MAGN) AT2G20450 Solyc06g083830.4 526 499 767 603 473 537 591 423 586 536 878 513 521 610 854 Casein kinase I isoform epsilon (AHRD V3.3 *** A0A2G2WMU9_CAPBA) AT4G14340 Solyc06g083850.4 13 18 39 78 6 8 5 3 20 31 43 19 29 37 77 NAC domain protein (AHRD V3.3 *** S5R645_9ROSA) Solyc06g083860.2 2292 2499 1807 2867 2311 2061 2070 2092 2604 2580 4067 2782 4313 2463 2594 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 (AHRD V3.3 *-* A0A2G3CCG9_CAPCH) Solyc06g083870.3 4301 3764 3247 2733 3443 3274 3175 3483 3974 2759 3263 3550 3737 3923 3334 structural maintenance of chromosomes 1 AT3G54670 Solyc06g083880.2 112 314 471 367 1111 1360 1130 897 458 387 517 634 249 287 351 pollen Ole e I family allergen protein (AHRD V3.3 *** AT2G20515.1) AT2G20515 Solyc06g083890.4 426 384 552 460 540 488 503 459 572 429 507 408 408 488 714 Pre-mRNA-splicing factor SLU7 (AHRD V3.3 *** A0A2G2WMV0_CAPBA) AT1G65660 Solyc06g083900.3 66 810 694 438 739 845 622 650 1181 1558 1237 1303 740 973 494 R2R3MYB transcription factor 13 Solyc06g083910.3 6 16 50 22 38 37 41 57 26 31 45 53 17 30 14 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QGX7_ARTAN) Solyc06g083920.4 376 366 199 340 207 281 294 266 273 342 215 315 350 357 288 Sn1-specific diacylglycerol lipase alpha (AHRD V3.3 *** A0A1J3GGI5_NOCCA) AT2G42450 Solyc06g083930.2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1NMH9_ARTAN) AT2G42430 Solyc06g083940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, C2H2 (AHRD V3.3 *-* A0A2U1L8R7_ARTAN) Solyc06g083950.3 0 0 7 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc06g083960.3 15 2 0 5 5 8 2 7 2 1 2 2 5 5 3 Myosin-5 (AHRD V3.3 *** A0A2G2ZEU6_CAPAN) Solyc06g083970.1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc06g083980.3 744 844 682 605 656 700 645 648 874 777 845 734 736 800 592 bHLH transcription factor138 AT4G16430 Solyc06g083990.3 183 215 224 191 285 256 289 239 223 189 323 220 215 272 296 Iron-sulfur cluster carrier protein (AHRD V3.3 *** A0A248JTD7_9PROT) AT4G19540 Solyc06g084000.4 5163 4038 3151 3175 2511 2750 2701 2651 2391 3406 2842 2868 3430 3672 3795 RNA-binding KH domain-containing protein (AHRD V3.3 *** A0A2U1LYS9_ARTAN) AT3G04610 Solyc06g084020.4 4583 6089 6523 7021 8783 7771 6447 8494 8062 7447 7972 9585 4314 6473 7664 histone H1 AT2G30620 Solyc06g084030.3 16 59 70 82 101 110 102 108 58 47 44 52 68 72 75 Methyltransferase type 11 (AHRD V3.3 *** A0A200QEQ4_9MAGN) AT1G69523 Solyc06g084040.3 56 126 121 90 163 142 193 164 129 110 74 148 141 151 65 E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *** A0A2G2X5V3_CAPBA) AT2G30580 Solyc06g150139.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc06g084050.4 66 315 323 310 1033 1087 974 964 403 295 246 462 141 125 217 Photosystem II reaction center W protein, chloroplastic (AHRD V3.3 *** A0A2G2WN23_CAPBA) AT2G30570 Solyc06g084060.3 248 1045 1178 1327 2227 2124 2089 2170 1044 875 841 1579 627 1129 437 F-box/LRR-repeat protein 17 (AHRD V3.3 *** A0A2G2WN42_CAPBA) AT3G54650 Solyc06g084070.3 14 65 35 45 38 18 20 35 49 30 50 33 13 55 38 auxin-regulated IAA2 Solyc06g084080.4 76 153 183 112 198 238 253 196 126 63 135 112 70 154 76 Guanylate-binding protein (AHRD V3.3 *** A0A200Q4F7_9MAGN) AT2G38840 Solyc06g084090.4 108 1165 1321 1573 2395 2476 2640 2584 945 763 1142 1680 294 858 626 Histone H2A (AHRD V3.3 *** A0A2G3CCJ9_CAPCH) AT3G54560 Solyc06g084110.1 27 11 2 3 2 3 1 4 2 3 0 0 1 1 0 kinase superfamily protein (AHRD V3.3 *-* AT3G63340.6) Solyc06g084120.4 517 335 327 394 451 428 470 543 399 419 463 482 225 342 142 Jasmonate ZIM domain protein k.1 (AHRD V3.3 *** I3WTA8_NICAT) AT4G14720 Solyc06g084130.3 10 1 0 17 3 11 6 6 5 7 24 3 0 4 2 Bax inhibitor 1-related (AHRD V3.3 *** A0A200Q4J7_9MAGN) AT1G03070 Solyc06g084140.4 170 202 189 636 119 116 101 85 153 326 614 83 110 73 516 Sulfate transporter (AHRD V3.3 *** Q70BL1_BRAOL) AT3G51895 Solyc06g084150.4 175 189 167 147 185 212 173 186 160 138 191 183 161 196 178 Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A200QYG8_9MAGN) AT3G63270 Solyc06g084160.4 497 654 812 593 738 827 704 783 616 651 647 575 805 684 484 Protein kinase domain (AHRD V3.3 *** A0A200Q4U8_9MAGN) AT5G26110 Solyc06g084170.3 38 15 28 23 0 3 5 0 6 20 24 11 15 3 50 Unknown protein Solyc06g084180.3 0 1 10 0 0 0 0 0 0 3 0 0 0 0 0 Major pollen allergen Ole e 6 (AHRD V3.3 *** A0A2G3CCI9_CAPCH) Solyc06g084190.3 0 0 15 0 0 7 4 2 11 21 51 1 0 0 0 Non-specific lipid-transfer protein-like protein (AHRD V3.3 *** A0A1J6J624_NICAT) Solyc06g084200.2 1741 1404 1153 1373 1158 1129 1158 1360 1154 1425 763 1317 903 1151 1005 flocculation FLO11-like protein (AHRD V3.3 *** AT4G02715.2) AT4G02715 Solyc06g084210.3 6411 6263 3899 4337 3856 3167 3521 4757 5158 6789 3600 5225 6442 6041 4078 Sec24-like transport protein (AHRD V3.3 *** A0A2U1NGT5_ARTAN) AT3G44340 Solyc06g084220.1 56 49 56 65 108 96 80 100 69 59 59 42 88 83 32 Heat shock protein (AHRD V3.3 *** Q8VY73_ARATH) AT3G22530 Solyc06g084230.3 1894 4327 4092 2894 4217 4517 4398 4069 2682 2105 2698 2928 5388 4406 3533 40S ribosomal protein S24 (AHRD V3.3 *** A0A1U8H1N3_CAPAN) AT3G04920 Solyc06g084240.2 7 30 24 45 13 14 13 14 21 16 12 6 44 46 61 copalyl diphosphate synthase AT4G02780 Solyc06g084250.4 153 371 391 420 720 813 928 827 390 273 290 374 289 415 341 ARM REPEAT PROTEIN INTERACTING WITH ABF2-like (AHRD V3.3 *** A0A2I4GSH6_9ROSI) AT5G19330 Solyc06g084260.3 331 832 510 734 870 691 755 914 750 966 533 861 754 750 587 Fatty-acid-binding protein 1 (AHRD V3.3 *** A0A1U8HAC4_CAPAN) AT3G63170 Solyc06g084270.3 736 608 633 603 509 479 523 513 504 481 431 553 463 578 683 Ribosome biogenesis GTPase A (AHRD V3.3 *** A0A1J3D381_NOCCA) AT4G02790 Solyc06g084280.1 217 273 220 294 240 220 177 316 273 206 153 412 248 345 134 Fantastic four-like protein (AHRD V3.3 *-* A0A2K3NF15_TRIPR) Solyc06g084290.3 296 292 369 302 285 331 292 312 293 323 556 322 203 222 357 Protein trichome birefringence-like 11 (AHRD V3.3 *** A0A2G2ZES4_CAPAN) Solyc06g084300.1 112 98 169 113 96 128 104 87 137 119 144 100 106 140 131 outer envelope membrane protein 7-like (AHRD V3.3 *** A0A2I4GU35_9ROSI) AT3G52420 Solyc06g084310.4 1583 1881 2352 2115 2411 2465 2429 1982 1512 1425 2325 2143 2027 1820 2374 Small nuclear ribonucleoprotein Sm D1 (AHRD V3.3 *** A0A2U1M5R8_ARTAN) AT3G07590 Solyc06g084320.1 343 157 70 147 178 229 184 184 111 186 127 193 93 150 507 EID1-like F-box protein 3 (AHRD V3.3 *** A0A2G2ZF18_CAPAN) AT3G63060 Solyc06g084325.1 13 1 0 0 0 0 1 0 2 5 0 1 0 1 0 Unknown protein Solyc06g084330.3 163 16 43 26 2 5 11 0 22 67 84 34 3 57 251 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *** A0A1P8B4I8_ARATH) AT4G02900 Solyc06g084340.1 0 0 6 0 0 0 0 0 1 0 0 0 8 0 0 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 --* AT1G30473.1) Solyc06g084350.3 278 420 396 362 573 505 551 522 323 307 387 385 525 398 373 U6 snRNA-associated Sm-like protein LSm2 (AHRD V3.3 *** A0A2G2ZWI3_CAPAN) AT1G03330 Solyc06g084360.4 1586 1083 1084 1151 1199 1208 1346 1106 988 911 915 922 923 962 1099 E3 Ubiquitin ligase family protein (AHRD V3.3 *** A0A2U1Q1V0_ARTAN) AT1G63900 Solyc06g084370.1 41 32 63 46 6 3 8 9 31 18 57 11 90 177 139 Unknown protein Solyc06g084380.4 17 44 76 81 39 56 35 34 38 46 14 39 25 60 29 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein (AHRD V3.3 *** G5DX62_SILLA) AT4G02940 Solyc06g084390.3 741 720 933 998 1127 942 1025 997 887 689 911 1034 818 905 911 ER auxin binding 1 AT4G02980 Solyc06g084400.3 1289 1483 1696 1843 2107 2231 1820 1849 1123 1378 1752 1489 1672 1523 1549 Methyl-CpG-binding domain-containing protein 1 (AHRD V3.3 *** A0A2G3CCG5_CAPCH) AT3G63030 Solyc06g084410.4 490 368 391 318 353 322 300 282 363 451 376 437 529 347 338 Histidine phosphotransfer protein (AHRD V3.3 *** A0A0A1WCB7_NICAT) Solyc06g084420.1 118 446 365 445 802 810 679 956 556 343 485 854 128 245 372 Leucine-rich repeat receptor-like kinase (AHRD V3.3 *** A0A0K9PKL2_ZOSMR) AT1G03440 Solyc06g084430.4 95 394 604 508 867 854 834 773 318 388 746 619 162 389 224 Histone H2A (AHRD V3.3 *-* A0A2G2WMP9_CAPBA) Solyc06g084440.3 968 1594 1084 1419 1416 1377 1301 2072 1671 1560 1170 1525 1990 1727 1168 NPL4-like protein (AHRD V3.3 *** A0A2G3CCP7_CAPCH) AT2G47970 Solyc06g084450.4 30 284 232 259 523 535 476 635 337 192 247 468 62 179 88 Rho GTPase-activating protein 2 (AHRD V3.3 *** A0A2G2WMS1_CAPBA) AT4G03100 Solyc06g084460.4 402 1476 1794 2216 2037 1894 2232 1813 3045 1784 2055 2741 1471 2436 1957 Shikimate dehydrogenase (AHRD V3.3 *** B6TSW1_MAIZE) Solyc06g084470.4 182 316 340 389 461 379 404 369 327 312 340 249 295 370 438 plant/protein (AHRD V3.3 *** AT4G03150.1) AT4G03150 Solyc06g084480.3 459 538 468 481 470 586 618 440 368 344 423 388 368 552 554 protease Do-like 2, chloroplastic (AHRD V3.3 *** A0A2I4ERY8_9ROSI) AT2G47940 Solyc06g084500.3 607 856 939 559 893 952 750 704 763 360 718 567 1078 895 885 rRNA-processing protein (AHRD V3.3 *** AT4G03180.1) AT4G03180 Solyc06g084510.4 557 580 495 742 698 789 825 788 619 510 471 626 667 595 614 E3 ubiquitin-protein ligase MIEL1 (AHRD V3.3 *** A0A2G2ZF12_CAPAN) AT3G62970 Solyc06g084520.3 3826 3002 2364 2839 2879 2973 3190 2970 2616 2775 2623 2873 2652 2761 2550 Cul1 Solyc06g084530.3 2347 1629 1085 1453 1306 1239 1357 1548 1583 1590 1013 1277 1340 1495 1655 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1N2C4_ARTAN) AT4G02480 Solyc06g084540.3 148 125 138 222 116 110 99 99 143 141 200 107 147 162 240 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** O82240_ARATH) AT2G47710 Solyc06g084550.3 179 206 222 281 204 304 305 238 144 167 203 254 133 234 228 Outer envelope pore protein 16-4, chloroplastic (AHRD V3.3 *** A0A1U8H1S9_CAPAN),Pfam:PF02466 AT3G62880 Solyc06g084570.4 361 270 314 345 425 404 429 352 401 316 280 306 319 389 428 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** B3H6G9_ARATH) AT4G02405 Solyc06g084580.1 128 203 80 97 100 121 106 153 117 114 99 141 268 191 97 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PMI1_9MAGN) AT4G20770 Solyc06g084590.4 2325 1143 1335 1473 823 911 1001 659 1021 1524 1289 1143 1188 1282 1392 Heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) (AHRD V3.3 *** B3H4C1_ARATH) Solyc06g084600.1 1 0 0 6 4 5 2 2 0 4 0 6 0 2 1 Unknown protein Solyc06g084610.4 326 328 352 340 354 391 364 359 320 321 310 300 175 285 346 Beta-carotene isomerase D27, chloroplastic (AHRD V3.3 *** A0A1J3JUT0_NOCCA) AT4G01995 Solyc06g084620.1 22 111 79 121 92 63 114 79 59 55 78 39 120 37 31 Pectinesterase (AHRD V3.3 *** A0A2G2WMS8_CAPBA) AT2G47030 Solyc06g084625.1 117 105 113 105 84 131 126 83 103 74 113 104 91 104 83 dihydroorotate dehydrogenase (AHRD V3.3 *** AT4G01897.1) AT4G01897 Solyc07g005000.3 993 705 972 920 708 753 734 709 866 826 879 702 907 947 1238 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A1J3ES33_NOCCA) AT5G35180 Solyc07g005010.4 387 507 233 411 637 535 648 604 618 565 266 497 497 400 390 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A2R6QHS0_ACTCH) AT5G51350 Solyc07g005020.3 361 2084 1561 1241 2176 1981 2262 2427 1820 1010 1100 1881 1364 2051 360 DNA helicase (AHRD V3.3 *** A0A2G2Z086_CAPAN) AT2G07690 Solyc07g005030.4 1541 1101 1265 1019 751 852 959 985 1254 1506 1199 1082 1446 1394 1032 Dicer-like 4 AT5G20320 Solyc07g005033.1 0 7 2 1 0 0 4 1 2 0 0 0 0 2 0 Plasma membrane ATPase (AHRD V3.3 *** A0A1U8H8S9_CAPAN) Solyc07g005037.1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 Plasma membrane ATPase (AHRD V3.3 *** A0A1U8H8S9_CAPAN) Solyc07g005050.3 1061 2473 4253 2320 3073 3604 3393 2635 1901 1191 2664 1838 3539 3271 3381 60S ribosomal protein L39 (AHRD V3.3 *** B6SYU3_MAIZE) AT4G31985 Solyc07g005060.3 218 153 190 263 170 202 229 178 164 147 182 152 151 169 234 Defective in cullin neddylation protein (AHRD V3.3 *** A0A2G2WAX8_CAPBA) Solyc07g005080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein (AHRD V3.3 *** A0A2U1N1A8_ARTAN) Solyc07g005090.4 71 40 19 30 26 36 14 22 113 83 53 41 48 31 20 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein (AHRD V3.3 *** A0A2U1N1A8_ARTAN) Solyc07g005100.4 3641 2656 2348 2806 583 594 743 824 3003 3390 2649 1469 3828 2127 2397 Chitinase/lysozyme (AHRD V3.3 *** Q43591_TOBAC) AT4G19810 Solyc07g005110.4 2 3 0 0 0 0 0 0 0 0 0 0 31 3 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2Z081_CAPAN) Solyc07g005120.3 258 170 162 224 231 185 194 226 261 295 341 243 255 219 157 Calcineurin-like metallo-phosphoesterase superfamily protein (AHRD V3.3 *** A0A2K3NDQ0_TRIPR) AT5G58200 Solyc07g005130.3 331 411 451 494 539 558 410 432 347 333 443 428 386 424 588 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LIY6_ARTAN) AT4G31020 Solyc07g005140.4 2015 1730 1828 1956 1552 1536 1603 1793 1721 1669 1652 2166 1991 2021 1578 Two-component response regulator (AHRD V3.3 *** A0A2G2Z087_CAPAN) AT2G25180 Solyc07g150100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G2Z081_CAPAN) Solyc07g005150.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *** A0A1S3ZS92_TOBAC) AT1G47890 Solyc07g005160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200Q159_9MAGN) Solyc07g005170.3 13 11 12 26 6 9 16 11 16 17 35 34 17 24 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WLE8_9ASPA) Solyc07g005180.3 1394 1420 2162 2129 1913 2001 2007 1430 1385 1692 2802 1567 1831 1439 2599 DUF1068 domain-containing protein (AHRD V3.3 *** A0A1Q3CIU1_CEPFO) AT4G30996 Solyc07g005190.3 199 161 413 379 272 234 289 307 560 255 371 350 399 440 424 Lysosomal Pro-X carboxypeptidase (AHRD V3.3 *** A0A1J3DVN3_NOCCA) AT2G24280 Solyc07g005200.3 551 711 497 626 615 522 566 567 708 627 540 624 796 702 594 Synaptobrevin-like protein (AHRD V3.3 *** A0A2U1NP32_ARTAN) AT5G58060 Solyc07g005205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g005210.3 1482 425 353 543 512 427 440 395 419 401 360 356 470 487 804 Outer membrane lipoprotein blc-like (AHRD V3.3 *** A0A2K3KEW8_TRIPR) AT5G58070 Solyc07g005220.1 40 27 24 68 27 26 46 50 23 40 52 44 18 18 43 Unknown protein Solyc07g005230.2 154 126 69 146 80 121 136 109 129 136 93 84 157 154 221 Unknown protein Solyc07g005235.1 5 0 0 0 0 2 5 2 6 0 1 0 3 1 1 Unknown protein Solyc07g005240.4 326 247 312 319 251 244 289 251 200 189 237 148 283 307 202 FAD-dependent oxidoreductase family protein (AHRD V3.3 *** A0A2U1NVG0_ARTAN) AT2G22650 Solyc07g005250.1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 Unknown protein Solyc07g005260.1 14 12 3 22 13 31 12 10 19 12 14 17 17 32 53 Unknown protein Solyc07g005270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g005280.3 27 22 23 14 38 49 59 18 22 25 35 34 14 17 44 Unknown protein Solyc07g005300.1 121 57 110 141 93 128 153 65 62 112 91 52 39 88 111 Unknown protein Solyc07g005305.1 111 91 184 120 105 144 117 63 90 124 260 83 153 128 195 Unknown protein Solyc07g005310.3 23 9 7 26 10 12 18 17 17 12 2 14 2 13 0 Unknown protein Solyc07g005320.3 3022 2161 1870 1652 1608 1634 1694 1785 2429 1624 2163 1834 1824 2305 2568 FIP1 (AHRD V3.3 *** A0A2G2WAR6_CAPBA) AT5G58040 Solyc07g005330.3 2466 5983 7070 4639 6688 5997 5181 7351 4802 6050 6487 5900 5400 4146 3511 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A2U1LWN7_ARTAN) AT3G55430 Solyc07g005340.2 1033 811 667 616 764 829 596 814 794 755 593 763 690 854 709 protein RTF2 homolog (AHRD V3.3 *** A0A2I4H2E8_9ROSI) AT5G58020 Solyc07g005343.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g005347.1 0 0 0 0 1 2 2 0 3 1 0 0 0 0 0 Unknown protein Solyc07g005360.3 782 950 921 1228 949 1030 1062 826 862 636 915 692 878 1077 968 Hexosyltransferase (AHRD V3.3 *** A0A1U8FP12_CAPAN) AT1G06780 Solyc07g005370.4 14 48 1 40 1 5 9 3 38 14 0 7 18 0 6 Bet v I domain (AHRD V3.3 *** A0A200PXK2_9MAGN) Solyc07g005380.4 0 1 0 8 0 0 0 0 3 0 7 2 1 0 0 Bet v I domain (AHRD V3.3 *** A0A200PXK2_9MAGN) Solyc07g005390.3 1959 6019 1366 2621 5236 4275 4578 5322 5543 4425 1106 4834 3122 2254 1124 Aldehyde dehydrogenase 11A3 (AHRD V3.3 *** A0A2H1ZE23_ARATH) AT2G24270 Solyc07g005400.3 1473 1068 1414 2098 429 449 411 399 771 1255 682 932 1195 1229 874 bHLH transcription factor 050 AT2G24260 Solyc07g005410.3 12 10 5 18 2 0 1 9 9 11 13 3 9 10 13 Cytochrome c oxidase%2C subunit Vib family protein (AHRD V3.3 *** AT5G58005.2) AT5G58005 Solyc07g005420.2 7 0 0 6 0 0 0 0 0 3 0 0 0 6 12 Unknown protein Solyc07g005430.3 525 552 689 761 568 601 659 457 392 554 674 411 794 751 832 SH3/FCH domain protein (AHRD V3.3 *** AT1G68680.1) AT1G68680 Solyc07g005440.1 397 751 641 655 1819 2227 2047 1786 899 803 555 677 614 558 716 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2WAR5_CAPBA) AT4G30960 Solyc07g005450.3 551 404 431 407 464 586 527 410 420 499 629 520 478 522 550 RNA polymerase II C-terminal domain phosphatase-like 4 (AHRD V3.3 *** A0A2G2WAZ5_CAPBA) AT5G58003 Solyc07g005460.4 338 354 295 315 297 319 265 279 309 287 306 290 521 443 367 RNA polymerase II C-terminal domain phosphatase-like 4 (AHRD V3.3 *** A0A2G2WAZ5_CAPBA) AT5G58003 Solyc07g005470.4 38 92 151 119 98 97 75 74 132 67 223 86 139 67 228 Reticulon-like protein (AHRD V3.3 *-* A0A2G3BP47_CAPCH) AT5G58000 Solyc07g005475.1 60 53 70 42 35 66 55 18 29 29 35 29 33 35 71 Unknown protein Solyc07g005480.3 4468 3093 1806 3606 2252 1927 2444 2821 1900 4800 1313 2566 2190 2714 1521 Formin-like protein (AHRD V3.3 *-* A0A2G3BXE8_CAPCH) AT5G58160 Solyc07g005490.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g005500.2 799 551 225 406 442 352 331 494 483 678 249 469 338 489 286 Formin-like protein (AHRD V3.3 *-* A0A2G3BXE8_CAPCH) Solyc07g005510.3 1542 3124 1421 2313 4169 4287 4431 4764 2564 2624 1321 2215 1716 1556 1376 Omega-6 fatty acid desaturase, chloroplastic (AHRD V3.3 *** A0A2G3BXG4_CAPCH) AT4G30950 Solyc07g005520.1 240 138 135 103 67 106 79 55 75 136 137 72 165 207 158 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2WAS9_CAPBA) AT2G24240 Solyc07g005530.4 5619 6853 6338 6295 11405 12622 11484 10442 8054 5103 6213 7327 6028 7135 6516 Ubiquitin carboxyl-terminal hydrolase 23 (AHRD V3.3 *** A0A1U8HH33_CAPAN) AT5G57990 Solyc07g005540.1 653 749 718 675 838 895 805 685 874 507 849 833 661 942 888 Protein kinase domain (AHRD V3.3 *** A0A200QFM8_9MAGN) AT2G24230 Solyc07g005550.4 695 644 613 895 787 810 835 697 569 548 764 629 872 778 1045 replicase polyprotein 1ab protein (AHRD V3.3 *** AT2G44870.1) AT2G44870 Solyc07g005560.3 6016 7058 7328 6236 7241 6801 7397 7494 7757 5092 5889 6028 8395 6971 8358 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A2G3BXD8_CAPCH) AT1G13950 Solyc07g005570.4 515 490 544 447 495 436 434 446 647 393 605 507 428 464 646 APO protein 2, chloroplastic (AHRD V3.3 *** A0A2G2WAU5_CAPBA) AT5G57930 Solyc07g005580.4 260 368 290 410 449 475 456 487 314 366 374 363 337 404 184 1-acyl-sn-glycerol-3-phosphate acyltransferase (AHRD V3.3 *** A0A2G3BXE9_CAPCH) AT4G30580 Solyc07g005590.3 984 1115 737 997 680 715 727 934 1201 1077 821 818 1423 1091 755 Cyclic nucleotide-gated channel 6 (AHRD V3.3 *** A0A2U1KIM7_ARTAN) AT5G57940 Solyc07g005600.4 2400 4797 4033 5534 5185 5608 5991 5163 3957 4254 3880 3970 3778 4171 3460 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G2WAT2_CAPBA) AT5G10840 Solyc07g005620.2 82 56 61 58 78 87 71 94 98 67 53 65 51 39 50 Endonuclease/Exonuclease/phosphatase family (AHRD V3.3 *-* T1W908_9ZZZZ) Solyc07g005630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 1 (AHRD V3.3 -** XP_020080865.1),Pfam:PF00304 Solyc07g005640.3 333 359 217 237 215 206 252 227 234 225 151 224 292 253 196 26S proteasome non-ATPase regulatory subunit 9 (AHRD V3.3 *** A0A2I4DUP1_9ROSI) AT5G57950 Solyc07g005650.4 987 711 506 621 509 415 413 417 557 547 537 478 765 724 779 WRKY transcription factor 32 AT4G30935 Solyc07g005655.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 182 (AHRD V3.3 -** XP_011080983.1) Solyc07g005660.4 269 370 217 271 352 438 327 324 377 440 271 315 390 282 317 Purine permease (AHRD V3.3 *** A0A2P5FNM5_TREOI) AT2G24220 Solyc07g005670.3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Integral membrane HRF1 family protein (AHRD V3.3 *** A0A2U1L8S6_ARTAN) Solyc07g005680.4 16 16 12 11 6 13 6 7 12 4 27 13 7 11 6 Carboxypeptidase (AHRD V3.3 *** A0A2G3BXD7_CAPCH) AT4G30610 Solyc07g005690.3 1053 692 856 877 493 646 559 538 712 696 889 567 856 674 848 ribosomal RNA small subunit methyltransferase G (AHRD V3.3 *-* AT5G57910.2) AT4G30630 Solyc07g005700.3 586 990 881 800 1148 1027 1046 1331 1116 685 758 1051 911 1035 974 UBP1-associated proteins 1C-like isoform X3 (AHRD V3.3 *-* A0A2I4F9U7_9ROSI) AT2G24030 Solyc07g005710.3 420 394 497 290 342 354 382 311 287 259 487 365 427 368 338 Unknown protein Solyc07g005715.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Low temperature and salt responsive protein family (AHRD V3.3 -** AT4G30660.2) Solyc07g005720.3 81 80 109 140 162 161 232 147 110 113 127 128 132 78 107 Low temperature and salt responsive protein (AHRD V3.3 *** A0A2K3ML14_TRIPR) AT4G30660 Solyc07g005730.4 802 788 1319 1333 1223 1224 1312 969 612 864 1270 1025 1006 870 1162 Low temperature and salt responsive protein (AHRD V3.3 *** A0A2K3ML14_TRIPR) AT4G30660 Solyc07g005740.1 87 102 101 216 198 255 263 230 100 110 86 159 111 239 84 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QWP2_9MAGN) Solyc07g005750.3 247 153 201 270 151 208 180 233 141 246 186 156 230 154 247 F-box family protein (AHRD V3.3 *** S8DYG8_9LAMI) AT5G57900 Solyc07g005760.3 2465 2730 1831 2511 1678 1769 1751 1365 3390 2614 2570 2101 2772 1924 1365 hydroxycinnamoyl CoA quinate transferase Solyc07g005770.2 122 104 175 178 175 249 286 170 224 107 203 155 172 180 266 Disease resistance protein (AHRD V3.3 *** A0A2U1Q881_ARTAN) Solyc07g005775.1 51 41 127 159 34 17 17 11 25 44 85 12 72 86 228 Unknown protein Solyc07g005780.2 0 1 0 0 0 0 0 0 1 0 0 0 0 2 0 Eukaryotic translation initiation factor isoform 4G-2 (AHRD V3.3 *** A0A2G3BXK5_CAPCH) Solyc07g005790.4 153 161 214 228 212 253 276 183 126 125 195 169 123 222 267 Multipolar spindle 1 (AHRD V3.3 *** A0A2U1M6R9_ARTAN) Solyc07g005800.2 14 23 5 10 15 15 19 16 24 14 5 17 13 9 4 Multipolar spindle 1 (AHRD V3.3 *-* A0A2K3PNZ0_TRIPR) Solyc07g005810.3 5685 9089 7311 6452 7143 7500 8025 7425 6253 4710 6125 5988 8804 8449 7784 Eukaryotic translation initiation factor isoform 4G-1 (AHRD V3.3 *** A0A2G3BWP5_CAPCH) AT5G57870 Solyc07g005820.3 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 Heat shock 70 kDa protein (AHRD V3.3 *** A0A2G2WB37_CAPBA) Solyc07g005830.3 549 711 806 875 953 879 1193 900 777 745 851 749 564 751 706 Translation initiation factor IF-3 (AHRD V3.3 *** A0A2G2WAV7_CAPBA) AT4G30690 Solyc07g005840.2 20 168 82 88 150 111 100 111 117 153 136 91 15 93 246 Cellulose synthase (AHRD V3.3 *** K4CB55_SOLLC) AT5G17420 Solyc07g005850.3 32 59 37 65 33 57 60 49 73 51 34 54 46 85 46 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3BWP1_CAPCH) AT4G30700 Solyc07g005860.3 169 381 569 609 655 679 701 720 508 394 462 512 436 429 383 QWRF motif protein (DUF566) (AHRD V3.3 *-* A0A1P8B957_ARATH) AT4G30710 Solyc07g005870.3 238 314 208 280 187 226 281 204 242 177 336 228 310 333 401 FAD dependent oxidoreductase (AHRD V3.3 *** L7VQJ3_CLOSH) AT4G30720 Solyc07g005880.3 2705 2157 1553 1562 1657 1510 1569 1952 1864 1901 1344 1946 1892 1833 1593 Replication factor C subunit 1 (AHRD V3.3 *** A0A2G2YZY8_CAPAN) AT5G22010 Solyc07g005890.3 646 377 247 294 317 340 285 295 302 304 246 283 274 360 268 DEAD-box ATP-dependent RNA helicase 1 (AHRD V3.3 *** A0A2G2WAM1_CAPBA) AT4G15850 Solyc07g005900.3 25 88 104 89 136 134 140 136 86 74 81 140 89 102 66 calcineurin subunit B-like (AHRD V3.3 *** A0A2I4E1D1_9ROSI) Solyc07g005910.3 20 38 59 100 27 52 41 34 64 27 108 40 29 49 57 Zein-binding domain-containing protein (AHRD V3.3 *** A0A2U1P5H2_ARTAN) AT5G57830 Solyc07g005920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A061GNP8_THECC) AT2G24130 Solyc07g005930.4 1661 1292 1654 1277 765 882 1143 779 1239 1020 1323 1445 1345 1844 2063 DNA-directed RNA polymerase (AHRD V3.3 *** A0A2G3BXA8_CAPCH) AT2G24120 Solyc07g005940.4 1591 2411 1916 2161 2533 2550 2706 2922 2784 2277 1936 2141 2671 2435 2784 V-type proton ATPase subunit H (AHRD V3.3 *** A0A2G2YZQ7_CAPAN) AT3G42050 Solyc07g005945.1 350 266 643 572 308 372 327 202 196 245 421 237 356 374 561 Unknown protein Solyc07g005950.4 312 329 238 294 299 276 289 335 331 324 252 313 237 362 301 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A1U8HGT6_CAPAN) AT4G30825 Solyc07g005960.3 1763 2796 2463 2549 2231 2015 2019 2213 3599 3004 3590 2502 6334 4634 3437 Carboxypeptidase (AHRD V3.3 *** A0A1U8F7V7_CAPAN) AT4G30810 Solyc07g005970.3 1148 733 982 852 742 714 817 756 975 1065 830 843 716 913 798 Autophagy-related protein 11 (AHRD V3.3 *** A0A200QHW8_9MAGN) AT4G30790 Solyc07g005975.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc07g005980.2 6 10 3 1 0 9 7 2 2 3 0 5 3 1 3 Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *-* A0A2U1MFR1_ARTAN) Solyc07g005990.3 3516 2744 3332 3109 3430 3738 4158 3031 2651 2869 3878 2755 2949 3162 4345 ATP-dependent DNA helicase (AHRD V3.3 *** Q9ZUI1_ARATH) AT4G30780 Solyc07g006000.3 147 531 466 499 738 631 802 833 519 397 425 457 413 491 295 50S ribosomal protein L35 (AHRD V3.3 *** A0A2G3BXF7_CAPCH) AT2G24090 Solyc07g006010.3 766 985 549 1031 631 646 791 1002 456 996 635 1062 967 1075 531 Nuclear pore complex protein NUP43 (AHRD V3.3 *** A0A2G2XYZ1_CAPAN) AT4G30840 Solyc07g006020.3 58 34 78 139 31 34 26 29 41 44 90 24 21 61 44 Heptahelical transmembrane protein 2 (AHRD V3.3 *** A0A2G2XYZ3_CAPAN) AT4G30850 Solyc07g006030.4 2267 2499 789 1405 2378 2778 2532 2743 1535 1469 530 1063 1244 876 1110 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1MFU8_ARTAN) AT4G28080 Solyc07g006040.3 8 33 13 14 29 16 20 13 14 10 15 9 18 3 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** AT4G30845.1) AT4G30845 Solyc07g150101.1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Unknown protein Solyc07g006050.3 94 249 123 174 308 247 312 376 233 180 113 255 110 159 116 Histone-lysine N-methyltransferase ASHR3 (AHRD V3.3 *-* A0A2G2XZF7_CAPAN) Solyc07g006060.3 63 171 258 271 275 308 308 219 161 107 189 171 82 210 73 Histone-lysine N-methyltransferase (AHRD V3.3 *** A0A2R6QHU9_ACTCH) Solyc07g006070.1 375 941 546 670 920 716 684 959 882 712 655 823 911 685 427 GDP-L-fucose synthase (AHRD V3.3 *** A0A1Y1HPT7_KLENI) AT1G17890 Solyc07g006075.1 26 65 70 109 96 130 141 79 39 22 17 50 65 96 50 Unknown protein Solyc07g006090.3 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 Glutamine amidotransferase (AHRD V3.3 *** A0A200QT70_9MAGN) AT4G30550 Solyc07g006100.4 7 7 18 25 7 5 20 18 13 6 2 9 13 15 7 Oxysterol-binding protein-related protein 1D (AHRD V3.3 *** A0A2G3BX83_CAPCH) Solyc07g006110.4 831 727 1497 887 855 902 742 750 645 553 585 766 715 831 826 Protein kinase domain (AHRD V3.3 *** A0A200QGH1_9MAGN) AT4G30520 Solyc07g006120.3 662 393 517 627 331 440 502 350 326 479 522 466 400 389 568 Autophagy-related protein 18b (AHRD V3.3 *** A0A2G3BX89_CAPCH) AT4G30510 Solyc07g006130.3 337 241 158 332 81 69 110 95 251 224 164 168 515 471 392 Eukaryotic peptide chain release factor subunit 1 (AHRD V3.3 *** A0A1U8F7R5_CAPAN) Solyc07g006140.4 2104 547 767 372 46 41 35 71 321 621 361 218 1243 675 559 Cytochrome (AHRD V3.3 *** A0A1U8FG41_CAPAN) AT3G14690 Solyc07g006150.3 526 742 1132 1002 1057 1267 1154 730 717 566 984 941 1064 1027 914 transmembrane protein (DUF788) (AHRD V3.3 *** AT2G23940.3) AT2G23940 Solyc07g006160.3 835 939 1586 1356 1467 1812 1944 1377 1428 1000 1734 1338 1126 1184 1502 AFG1-like ATPase family protein (AHRD V3.3 *** A0A2U1Q7V4_ARTAN) AT4G28070 Solyc07g006170.4 28 6 8 17 44 46 29 48 11 35 10 38 15 11 8 Exostosin domain-containing protein (AHRD V3.3 *** A0A1Q3D3Q6_CEPFO) Solyc07g006180.3 641 593 628 515 538 507 504 468 550 424 435 419 1138 829 631 ripening regulated protein (DDTFR5) AT4G30480 Solyc07g006190.3 763 769 848 904 592 789 775 608 503 528 696 592 757 896 832 5'-nucleotidase domain-containing protein (AHRD V3.3 *** A0A1J3EQC8_NOCCA) AT2G23890 Solyc07g006200.3 375 372 538 526 571 586 530 420 364 323 419 401 484 460 513 HD domain-containing protein 2 (AHRD V3.3 *** A0A1U8F7V0_CAPAN) AT2G23820 Solyc07g006210.1 0 0 3 1 0 0 0 0 0 1 0 1 0 0 12 ECA1 gametogenesis family protein (DUF784) (AHRD V3.3 --* AT4G13263.1) AT4G13263 Solyc07g006220.2 1273 1548 4652 1439 994 959 1036 981 1786 1840 3940 1750 2238 1393 4303 UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** A0A1U8F5Z6_CAPAN) AT4G30440 Solyc07g006230.1 40 68 30 73 13 26 19 32 46 38 14 9 113 65 69 Unknown protein Solyc07g006240.4 199 283 249 244 201 203 233 246 208 198 128 232 262 245 172 DNA-directed RNA polymerase III subunit RPC8 (AHRD V3.3 *** A0A2I4FZ65_9ROSI) AT1G06790 Solyc07g006260.3 340 407 539 367 466 478 528 469 446 358 495 446 525 491 407 protein FLX-like 4 isoform X2 (AHRD V3.3 *** A0A2I4FPK6_9ROSI) Solyc07g006265.1 386 602 760 737 815 776 807 822 559 528 548 620 692 649 586 Cytochrome c oxidase subunit (AHRD V3.3 *** A0A2I4GEN1_9ROSI) AT5G57815 Solyc07g006280.3 2914 1363 4479 1599 493 556 489 403 1118 2187 4967 1490 1499 1147 2374 Tetraspanin (AHRD V3.3 *** A0A200Q8V3_9MAGN) AT2G23810 Solyc07g006290.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WAT1-related protein (AHRD V3.3 *** K4CBA0_SOLLC) AT4G30420 Solyc07g006300.4 467 697 1153 1023 362 697 654 392 999 473 952 830 551 992 1043 Protein ECERIFERUM 3 (AHRD V3.3 *** A0A2G3BXC2_CAPCH) AT5G57800 Solyc07g006310.1 4 6 29 24 30 24 17 7 31 21 7 6 14 11 21 transcription factor IBH1-like (AHRD V3.3 *-* A0A2I4FVW6_9ROSI) Solyc07g006320.4 12 31 27 51 27 2 11 14 45 14 36 11 19 13 53 auxin canalization protein (DUF828) (AHRD V3.3 *** AT5G57770.2) AT5G57770 Solyc07g006330.2 80 146 148 185 146 193 192 162 112 105 125 134 124 156 137 Mannosyltransferase (AHRD V3.3 *** A0A2G2YZQ2_CAPAN) AT5G14850 Solyc07g006340.3 167 212 203 282 241 247 297 258 191 243 177 215 144 207 213 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** A0A2U1QH18_ARTAN) AT4G28030 Solyc07g006350.3 1716 901 1108 1391 986 995 1131 861 848 1304 1185 1201 856 1003 1114 E3 ubiquitin-protein ligase XBAT32 (AHRD V3.3 *** A0A1U8FG64_CAPAN) AT5G57740 Solyc07g006360.1 85 219 223 248 227 270 204 188 234 153 259 209 192 214 288 RING-H2 finger protein ATL13-like (AHRD V3.3 *** A0A2I4FHA6_9ROSI) AT4G30400 Solyc07g006370.1 580 394 267 197 71 78 45 55 334 513 187 173 471 274 116 cation/calcium exchanger 1 (AHRD V3.3 *** A0A2I4FP28_9ROSI) Solyc07g006380.3 12553 17658 88900 58596 96544 106000 83850 96832 174880 141309 157770 175631 14635 51322 16385 Defensin-like protein (AHRD V3.3 *** A0A1U8HFN5_CAPAN) Solyc07g006390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EG45-like domain containing protein (AHRD V3.3 *** A0A2I4FJD4_9ROSI) AT4G30380 Solyc07g006395.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EG45-like domain containing protein (AHRD V3.3 *** A0A2I4HK88_9ROSI) Solyc07g006400.3 669 845 540 796 898 801 667 796 570 1180 555 879 720 587 427 RING/U-box superfamily protein (AHRD V3.3 *-* Q1G3M1_ARATH) AT4G30370 Solyc07g006410.1 212 136 77 165 61 113 73 58 99 147 42 110 127 142 144 transmembrane protein (AHRD V3.3 *** AT4G16850.1) AT4G16850 Solyc07g006420.1 55 11 12 25 8 1 2 1 9 7 15 2 10 26 6 transmembrane protein (AHRD V3.3 *** AT2G18680.1) AT2G18690 Solyc07g006430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 aspartic proteinase nepenthesin-2-like (AHRD V3.3 *** A0A1U7WYF9_NICSY) Solyc07g006440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2Z7CS60_9LAMI) Solyc07g006450.1 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1PYZ3_ARTAN) Solyc07g006460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1PYZ3_ARTAN) Solyc07g006470.1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** Q9C6M0_ARATH) Solyc07g006480.4 793 513 701 263 42 43 51 30 247 689 1781 158 783 657 288 Receptor-like kinase (AHRD V3.3 *** D4QD70_DIACA) Solyc07g006490.3 177 175 255 195 285 285 249 207 243 138 252 154 163 174 215 hypothetical protein (AHRD V3.3 *** AT4G28025.2) AT4G28025 Solyc07g006500.3 7037 1077 803 521 64 98 100 59 353 1864 1305 292 400 1103 738 trehalose-6-phosphate synthase 1 AT2G18700 Solyc07g006510.3 2929 1657 1784 1471 1259 1194 1134 1088 1420 1809 1755 1351 1766 1679 1757 Cyclic nucleotide-gated ion channel-like protein (AHRD V3.3 *** A0A2K3MW13_TRIPR) AT4G30360 Solyc07g006520.3 963 1337 1511 1384 1713 1466 1572 1597 1334 1165 1365 1308 1146 1430 1483 Preprotein translocase subunit SECY, chloroplastic (AHRD V3.3 *** A0A2G2WAI9_CAPBA) AT2G18710 Solyc07g006530.3 1405 1620 1738 1438 1476 1497 1735 1498 1289 1032 1318 1214 1757 1803 1790 Adenylosuccinate lyase (AHRD V3.3 *** A0A2G2YZL5_CAPAN) AT1G36280 Solyc07g006540.3 1128 905 1574 828 502 660 589 549 1053 833 1608 748 1100 924 1199 Double CLP-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2K3PMT6_TRIPR) AT5G57710 Solyc07g006550.2 39 69 84 105 95 82 79 61 83 74 74 62 40 44 33 ribonuclease 3-like (AHRD V3.3 *-* XP_004242665.1) Solyc07g006560.3 268 965 529 1095 360 379 286 259 22333 10528 19944 13193 1358 1862 1106 Hypersensitive response assisting protein (AHRD V3.3 *** Q9SWC6_CAPAN) Solyc07g006570.4 268 1093 697 2239 359 308 246 203 26040 18519 33222 22450 2078 3145 3315 S-like ribonuclease (AHRD V3.3 *** Q9FQL6_PRUDU) Solyc07g006580.3 332 208 315 289 375 347 357 470 379 388 360 351 212 247 346 Diacylglycerol kinase (AHRD V3.3 *** A0A2G2YZQ1_CAPAN) AT4G30340 Solyc07g006590.1 98 87 105 236 22 15 26 13 40 33 64 6 135 71 233 hypothetical protein (AHRD V3.3 *** AT5G35732.1) AT5G35732 Solyc07g006600.1 32 108 118 112 567 600 540 334 67 27 49 69 171 125 143 Protein GLUTAMINE DUMPER 3 (AHRD V3.3 *-* A0A2G2WAS7_CAPBA) AT5G57685 Solyc07g006605.1 0 8 14 22 27 19 29 28 2 11 10 18 2 8 8 Unknown protein Solyc07g006610.3 0 2 0 0 1 0 0 0 0 0 0 0 0 1 0 PTI1-like tyrosine-protein kinase (AHRD V3.3 *** A0A1U8H7H2_CAPAN) Solyc07g006620.4 47 41 17 42 52 29 23 8 31 16 16 15 14 29 21 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1L2N8_ARTAN) AT5G57670 Solyc07g006630.4 2187 954 128 1880 1760 1442 1724 1530 1054 1261 137 915 1035 440 102 Zinc finger protein CONSTANS-like 5-like (AHRD V3.3 *** A0A2K3N2C5_TRIPR) AT5G57660 Solyc07g006640.3 904 877 975 1012 1007 1139 939 911 954 777 845 875 1011 1077 1225 ADP-ribosylation factor (AHRD V3.3 *** A0A1Y1HIH3_KLENI) AT2G24765 Solyc07g006650.4 1973 1517 1412 1246 1267 1261 1380 1522 1916 1512 1153 1355 1811 1635 1328 Xylose isomerase (AHRD V3.3 *** A0A1U8H8G3_CAPAN) AT5G57655 Solyc07g006660.1 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 Glyoxal oxidase-related protein (AHRD V3.3 *** Q9SVX6_ARATH) AT3G57620 Solyc07g006670.1 0 12 1 13 10 0 2 0 9 5 0 4 12 2 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc07g006680.1 278 346 23 299 549 464 371 652 245 92 26 133 282 55 11 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc07g006690.3 564 415 282 300 384 326 338 327 301 372 345 351 390 351 340 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** B6SYS8_MAIZE) AT4G25770 Solyc07g006700.1 11 89 12 127 237 213 199 234 40 53 18 46 102 95 38 Pathogenesis-related protein PR-1 (AHRD V3.3 *** A0A1U8H8G8_CAPAN) AT4G25780 Solyc07g006710.2 1 7 0 3 11 13 5 9 10 0 2 2 1 0 5 Pathogenesis-related protein PR-1 (AHRD V3.3 *** A0A2G3BX31_CAPCH) AT5G57625 Solyc07g006720.4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** E5D2U2_ACTCH) AT5G17050 Solyc07g006730.4 19 98 54 90 74 34 89 98 57 31 43 57 30 34 39 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4FHR8_9ROSI) Solyc07g006740.3 1 3 0 0 0 0 0 0 1 0 0 0 0 1 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4FHR8_9ROSI) Solyc07g006745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein TAPETUM DETERMINANT 1-like (AHRD V3.3 *** A0A2I4H4K2_9ROSI) Solyc07g006750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 blind-like8 AT5G57620 Solyc07g006760.4 836 764 713 800 672 755 712 779 696 764 533 683 671 873 961 MAP kinase kinase kinase 43 AT5G57610 Solyc07g006765.1 27 18 13 2 8 17 10 30 18 16 6 16 14 30 11 Unknown protein Solyc07g006770.2 199 133 112 109 36 19 31 25 65 56 162 35 118 107 187 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc07g006780.3 1326 778 849 1165 819 849 828 807 644 868 1029 755 927 942 1278 Carbohydrate kinase (AHRD V3.3 *** A0A200QIB4_9MAGN) AT4G30310 Solyc07g006790.3 1062 1785 1185 1344 1389 1391 1516 1846 1532 1268 1107 1215 1831 1573 1313 Acetyltransferase component of pyruvate dehydrogenase complex (AHRD V3.3 *** A0A1U8HER3_CAPAN) AT3G13930 Solyc07g006800.1 2 0 2 0 3 0 0 1 3 1 0 4 9 6 0 Glycosyltransferase (AHRD V3.3 *** A0A0A1WDL3_NICAT) Solyc07g006810.3 1268 964 595 819 788 748 830 994 635 1119 538 1133 634 962 706 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (AHRD V3.3 *** S8C9K2_9LAMI) AT5G57590 Solyc07g006820.4 3680 2493 3080 2604 2201 2779 2451 1963 2745 2140 3155 2307 2555 2951 3738 Transcription initiation factor TFIID subunit 1 (AHRD V3.3 *** A0A2G2WAA9_CAPBA) AT1G32750 Solyc07g006830.4 6890 5055 3833 4829 4386 4225 3994 4547 4630 6616 4747 4917 5495 4665 4422 Calmodulin-binding protein (AHRD V3.3 *** A0A2U1PNP9_ARTAN) AT5G57580 Solyc07g006840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein 2 (AHRD V3.3 *** A0A2G2WAA3_CAPBA) Solyc07g006850.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G2WAC4_CAPBA) Solyc07g006860.3 15 29 30 39 92 106 104 56 56 43 43 54 31 32 45 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G2WAA0_CAPBA) Solyc07g006870.4 52 20 101 65 28 25 18 7 47 58 148 28 18 35 57 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A1U8HGQ4_CAPAN) Solyc07g006855.2 33 49 46 50 35 38 39 60 57 51 40 74 32 53 15 CASP-like protein (AHRD V3.3 *** A0A218XHD9_PUNGR) AT4G25830 Solyc07g006880.1 1 2 0 2 0 0 0 0 0 3 14 0 0 0 0 Zinc finger protein 7 (AHRD V3.3 *** A0A2G2YZK1_CAPAN) AT5G57520 Solyc07g006890.1 1204 962 886 418 90 99 82 85 466 1992 3308 610 1670 574 1070 Cytochrome P450 (AHRD V3.3 *** A0A200Q4B5_9MAGN) Solyc07g006900.2 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 SlPIN2 AT5G57090 Solyc07g006910.4 181 470 455 521 533 673 682 607 574 507 508 578 352 381 426 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2K3PLI2_TRIPR) Solyc07g006920.3 275 439 469 444 563 563 511 515 432 430 401 556 527 471 413 Protein trichome birefringence-like 2 (AHRD V3.3 *** A0A2G2YZL2_CAPAN) AT5G20590 Solyc07g006930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UPF0481 protein (AHRD V3.3 *** A0A2U1PRB0_ARTAN) Solyc07g006935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g006940.3 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *** A0A200QRD3_9MAGN) Solyc07g006950.3 295 181 184 203 157 211 185 176 171 261 257 229 257 242 210 Unknown protein Solyc07g006960.3 839 1134 1076 1096 1333 1356 1319 1346 944 1063 1000 1069 1221 1015 980 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** S8C4J7_9LAMI) AT2G18910 Solyc07g006970.4 207 168 111 124 81 60 59 91 159 194 102 160 203 138 158 Sugar transporter protein 3 AT4G02050 Solyc07g006980.1 5 2 0 2 0 0 0 2 2 1 0 1 1 0 5 TRICHOME BIREFRINGENCE-LIKE 5 (AHRD V3.3 *-* A0A1P8BDG5_ARATH) Solyc07g006990.3 33 36 33 32 18 23 22 5 28 18 44 38 33 50 37 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0V6S7_9ASPA) AT3G15130 Solyc07g007000.2 17 10 23 18 4 11 3 7 8 10 14 2 18 17 47 Protein trichome birefringence (AHRD V3.3 *-* A0A1J3I8M9_NOCCA) Solyc07g007010.1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 UPF0481 protein (AHRD V3.3 *** A0A2U1PRB0_ARTAN) Solyc07g007020.3 467 917 305 616 838 829 797 872 687 374 442 388 570 463 265 Protein kinase (AHRD V3.3 *** A1YKG7_BRASY) Solyc07g007030.1 813 1709 991 1625 1112 1093 1184 1240 1276 1393 1122 1313 1281 1159 1013 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A1U8H8P1_CAPAN) AT5G35160 Solyc07g007040.4 2415 2040 2565 2121 1865 2411 2419 2239 2326 1915 2314 2006 1907 2353 2069 G-patch domain-containing protein (AHRD V3.3 *** A0A2G2WAZ6_CAPBA) AT3G09850 Solyc07g007050.1 78 93 130 128 80 90 95 47 65 69 235 91 99 72 124 hypothetical protein (AHRD V3.3 *-* AT2G46490.1) AT5G35110 Solyc07g007060.3 1345 1860 1898 1863 1335 1208 1421 1527 2711 2101 2472 1808 2741 1953 2534 Metal tolerance protein (AHRD V3.3 *** E5GC92_CUCME) AT2G46800 Solyc07g007070.1 3 0 1 0 0 0 1 0 1 1 0 0 1 0 0 epsin-like (AHRD V3.3 --* XP_026422722.1) Solyc07g007080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT5G35110.1) Solyc07g007090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g007100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 --* AT5G35110.1) Solyc07g007110.4 316 298 376 713 364 458 590 497 354 640 468 414 295 389 385 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2U1P8R3_ARTAN) AT5G35100 Solyc07g007120.3 6844 3751 3299 3133 2183 2183 1885 2242 4364 4726 4616 2975 3728 3833 5030 class II knotted-like homeodomain protein AT5G25220 Solyc07g007130.1 1194 714 877 421 97 104 113 76 181 416 2596 328 535 503 1176 NHL domain protein (AHRD V3.3 *** A0A1P8BDM5_ARATH) Solyc07g007140.3 2067 2034 1642 1833 1782 1807 1938 1972 2008 1829 1456 1733 1927 1982 1776 MAP kinase kinase kinase 44 AT3G46920 Solyc07g007150.1 455 384 423 1501 253 249 499 265 419 896 662 424 499 489 766 hypothetical protein (AHRD V3.3 -** AT5G35090.1) Solyc07g007160.3 242 287 361 262 326 315 309 252 400 195 472 136 326 236 592 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8AQV3_ARATH) AT2G15580 Solyc07g007170.3 914 399 889 298 31 51 36 29 253 188 1285 183 559 406 548 RING/U-box superfamily protein (AHRD V3.3 *** AT2G15580.2) Solyc07g007180.4 256 111 178 289 48 87 54 37 157 163 302 78 167 189 538 RING U-box superfamily protein (AHRD V3.3 *-* A0A0U9HLC9_KLENI) Solyc07g007190.3 50 489 543 898 1112 1194 1196 1132 550 387 586 705 73 366 307 glycoprotein, nuclear encoding mitochondrial protein, mRNA (AHRD V3.3 *-* NP_001132759.1) Solyc07g007200.4 97 152 115 150 146 147 149 151 139 157 113 142 143 103 121 RING/U-box superfamily protein (AHRD V3.3 *-* F4KD57_ARATH) Solyc07g007210.3 4562 4285 3354 3112 3422 3409 3478 3591 3105 3351 2533 3349 3507 3739 2913 Elongation factor 2 (AHRD V3.3 *** A0A2I0WLE3_9ASPA) AT1G06220 Solyc07g007220.3 616 508 910 751 314 369 381 316 925 572 1544 652 894 723 937 Protein phosphatase 2C (AHRD V3.3 *** Q8S8Z1_MESCR) Solyc07g007230.4 7545 4390 3854 4181 5380 5093 4231 4820 3741 5006 3718 4701 3670 3612 2929 Chaperone dnaJ-domain containing protein (AHRD V3.3 *** A0A2K3MJF2_TRIPR) AT5G64360 Solyc07g007240.3 95 89 104 80 119 107 116 125 211 183 157 78 94 67 174 Metallocarboxypeptidase inhibitor (AHRD V3.3 *** A0A2G3BXM1_CAPCH) Solyc07g007250.4 132 621 280 1133 47 54 47 24 1904 1383 13950 2624 437 583 1938 Metallocarboxypeptidase inhibitor (AHRD V3.3 *** A0A2G3BXM1_CAPCH) Solyc07g007260.4 2 26 24 122 6 15 10 5 58 55 44 160 19 29 334 Metallocarboxypeptidase inhibitor (AHRD V3.3 *-* A0A2G3BXM1_CAPCH) Solyc07g007270.3 27 42 18 83 2 10 1 0 22 28 29 4 48 42 483 Unknown protein Solyc07g007280.4 47 73 70 84 108 73 58 77 123 62 84 57 34 52 103 Chlororespiratory reduction 6 (AHRD V3.3 *** A0A0F7CZ65_9ROSI) AT2G47910 Solyc07g007290.1 0 0 0 0 0 0 0 0 6 5 0 4 0 0 0 Flavin-containing monooxygenase (AHRD V3.3 *** A0A1U8F1B2_CAPAN) Solyc07g007300.3 450 236 286 341 262 318 287 271 227 284 313 323 261 225 308 Methyltransferase-like (AHRD V3.3 *** Q67W64_ORYSJ) AT2G41040 Solyc07g007310.3 535 496 567 543 481 486 543 530 577 651 678 536 463 484 533 Methyltransferase-like (AHRD V3.3 *** Q67W64_ORYSJ) AT2G41040 Solyc07g007320.3 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** Q1G3Q4_ARATH) AT2G12646 Solyc07g007330.1 1746 865 794 789 605 503 503 441 796 1769 775 617 484 708 1631 Serine-rich protein (AHRD V3.3 *** E5GCC5_CUCME) AT5G25280 Solyc07g007335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g007340.3 518 444 473 514 406 510 481 473 443 442 552 492 262 479 657 Major facilitator superfamily protein (AHRD V3.3 *** Q9M8M1_ARATH) AT1G80530 Solyc07g007350.1 764 586 756 575 330 336 277 302 842 596 936 594 689 467 730 Sterile alpha motif (SAM) domain protein (AHRD V3.3 *** Q1G3Q5_ARATH) AT2G12462 Solyc07g007355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g007360.3 2116 1853 1310 2852 2094 1792 1722 2225 1642 3407 1751 2813 1706 2088 1163 Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A2U1Q2J7_ARTAN) Solyc07g007370.3 883 467 527 305 305 284 256 322 516 568 394 382 631 397 331 Ubiquitin-associated (UBA)/TS-N domain-containing protein (AHRD V3.3 *** A0A2U1MD44_ARTAN) AT2G12550 Solyc07g007380.4 745 916 1010 843 855 927 915 901 871 780 958 891 1185 920 714 Protein OS-9-like protein (AHRD V3.3 *** A0A2G2Z0D3_CAPAN) AT5G35080 Solyc07g007390.3 1135 1356 999 1048 1056 1259 1192 1239 1232 889 749 859 1209 1240 1085 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** A0A1R7T3E0_ARATH) AT4G32070 Solyc07g007400.3 1514 223 36 48 6 12 10 7 35 112 44 33 31 102 164 Leucine-rich repeat-like protein (AHRD V3.3 *-* Q6K620_ORYSJ) Solyc07g007410.4 1668 219 45 36 3 17 6 5 26 101 13 53 19 80 99 Leucine-rich repeat (AHRD V3.3 *-* A0A200R908_9MAGN) Solyc07g007420.3 1375 160 7 27 4 4 2 0 13 84 4 27 18 45 32 F-box/LRR-repeat protein (AHRD V3.3 *** A0A2K3MS36_TRIPR) Solyc07g007430.3 1839 1121 1312 987 637 794 874 694 949 1464 1377 894 1269 1108 1268 S-acyltransferase (AHRD V3.3 *** A0A2G2WB21_CAPBA) AT5G20350 Solyc07g007440.1 19 46 28 34 49 69 62 69 51 19 58 46 40 29 68 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1MSI1_ARTAN) AT5G05810 Solyc07g007450.3 36 48 40 23 87 71 70 53 50 20 42 54 98 50 54 Iron-sulfur cluster assembly scaffold protein IscU (AHRD V3.3 *** A0A2G7TDU8_9FLAO) AT4G22220 Solyc07g007460.3 1 1 0 0 3 0 0 0 0 1 1 0 3 3 2 Cytochrome 71D7 (AHRD V3.3 *** A0A2G3AZ01_CAPCH) Solyc07g007480.2 5 0 0 1 0 0 0 0 0 0 8 1 0 3 23 Protein DETOXIFICATION (AHRD V3.3 *-* A0A200QUW9_9MAGN) AT2G04066 Solyc07g007490.2 5 2 0 7 0 0 0 0 2 1 0 0 2 3 13 Protein DETOXIFICATION (AHRD V3.3 *** A0A2U1KJS1_ARTAN) Solyc07g007500.3 1132 1881 1795 1115 2148 1850 1547 2032 2149 1123 1413 1473 2774 2199 1850 nucleolin isoform X1 (AHRD V3.3 *-* XP_004242730.1) Solyc07g007510.4 1874 2679 2696 2469 3525 2978 2584 3393 2476 2359 2483 3363 2382 2641 2113 Triphosphate tunel metalloenzyme 3 (AHRD V3.3 *** A0A2G3BXY8_CAPCH) AT2G11890 Solyc07g007520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g007530.1 3 2 0 0 0 0 0 0 0 0 1 2 0 0 0 Egg cell-secreted-like protein (DUF1278) (AHRD V3.3 -** A8MQE4_ARATH) Solyc07g007540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g007550.3 278 371 394 449 751 646 603 714 239 206 348 291 244 260 183 Heparanase-like protein 3 (AHRD V3.3 *** A0A2G2WBB8_CAPBA) AT5G34940 Solyc07g007560.3 455 493 272 439 513 559 641 593 392 489 174 471 427 312 242 Phosphate transporter 45 (AHRD V3.3 *** A0A1P8BAK7_ARATH) AT5G20380 Solyc07g007570.1 3 0 12 0 9 0 2 0 1 2 0 0 0 0 0 Unknown protein Solyc07g007580.2 15 5 0 5 3 1 3 3 1 2 0 2 0 0 3 Unknown protein Solyc07g007590.1 477 634 999 619 763 702 640 774 780 876 944 841 689 613 663 arogenate dehydrogenase 2, chloroplastic (AHRD V3.3 *** A0A2G2Z0J0_CAPAN) AT1G15710 Solyc07g007600.3 5240 13079 8436 10321 10837 10477 10023 12058 9752 9836 7894 10746 10919 10504 7884 vacuolar-type H+-pyrophosphatase Solyc07g007610.2 124 110 112 118 78 134 105 110 109 204 98 166 159 115 157 RING/U-box superfamily protein (AHRD V3.3 *-* B6SXU5_MAIZE) Solyc07g007620.3 596 477 506 606 633 654 590 549 555 483 432 630 373 509 240 Monogalactosyldiacylglycerol synthase 3, chloroplastic (AHRD V3.3 *** A0A2G3BXT4_CAPCH) AT5G20410 Solyc07g007630.3 561 470 639 508 557 551 519 464 439 604 628 458 502 530 509 Actin-related protein 2/3 complex subunit 3 (AHRD V3.3 *** A0A2G3BXX3_CAPCH) AT1G60430 Solyc07g007640.3 257 278 266 272 324 388 339 238 253 247 313 242 226 334 315 Ubiquitinyl hydrolase 1 (AHRD V3.3 *-* A0A2G2Z0H0_CAPAN) Solyc07g007650.3 573 706 576 599 615 636 611 572 629 476 488 566 605 727 696 Translocase of chloroplast 90, chloroplastic (AHRD V3.3 *** A0A2G2WBA3_CAPBA) AT5G20300 Solyc07g007660.1 301 200 185 250 188 140 164 192 195 239 169 137 264 204 141 Armadillo-like helical (AHRD V3.3 *** A0A2U1PY40_ARTAN) Solyc07g007670.3 1177 1538 1840 1633 1671 1511 1545 1855 2622 2411 1938 3117 1527 1841 1876 Purple acid phosphatase (AHRD V3.3 *** Q6J5M8_SOLTU) AT5G34850 Solyc07g007680.4 560 450 401 380 456 453 460 532 498 428 367 426 439 496 767 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1MY23_ARTAN) AT1G05500 Solyc07g007690.4 358 381 305 345 348 363 317 338 380 278 234 333 313 298 248 Chloride channel protein (AHRD V3.3 *** A0A328D084_9ASTE) AT5G33280 Solyc07g007700.3 159 216 207 200 263 254 255 297 206 201 156 209 299 269 139 S-isoprenylcysteine O-methyltransferase (AHRD V3.3 *** A0A2K3P4V6_TRIPR) AT5G59500 Solyc07g007705.1 80 38 40 21 26 41 38 25 29 31 31 34 15 22 27 Unknown protein Solyc07g007710.4 7 1 0 0 0 0 0 0 0 0 5 0 0 2 0 Defensin protein (AHRD V3.3 *** B1N680_SOLLC),Pfam:PF00304 AT2G02100 Solyc07g007720.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g007730.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin protein (AHRD V3.3 *** B1N679_SOLLC) AT2G02100 Solyc07g007735.1 1 4 6 4 10 11 12 8 3 1 1 0 0 2 5 Defensin protein (AHRD V3.3 *** B1N679_SOLLC),Pfam:PF00304 Solyc07g007740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein (AHRD V3.3 *** A0A1S3ZY62_TOBAC),Pfam:PF00304 Solyc07g007750.3 53 466 1092 931 3614 3617 3799 3891 3277 765 2110 2696 984 1072 755 Defensin protein (AHRD V3.3 *** B1N678_SOLLC),Pfam:PF00304 AT2G02100 Solyc07g007755.1 11299 19241 33016 27035 21104 20513 21446 17901 25532 21689 28277 20858 36583 32106 58286 Defensin protein (AHRD V3.3 *** B1N681_SOLPI) AT2G02100 Solyc07g007770.2 3 1 0 5 0 1 0 0 6 2 5 0 6 11 4 Unknown protein Solyc07g007780.3 1187 825 936 709 535 576 646 595 688 838 943 628 1208 916 856 Calmodulin-binding receptor-like cytoplasmic kinase 3 (AHRD V3.3 *** A0A1U8HFI8_CAPAN) AT2G11520 Solyc07g007790.3 1797 1177 1081 1262 456 511 490 552 999 1068 1050 547 1230 1339 3573 sucrose-phosphate synthase AT5G20280 Solyc07g007800.3 296 232 209 299 34 61 46 24 170 154 460 106 169 207 703 Heptahelical transmembrane protein 1 (AHRD V3.3 *** A0A2G3BMP4_CAPCH) AT5G20270 Solyc07g007810.3 544 448 471 446 503 468 503 462 440 404 481 380 465 497 538 N-alpha-acetyltransferase 35, NatC auxiliary subunit (AHRD V3.3 *** A0A1J3EIH3_NOCCA) AT2G11000 Solyc07g007820.3 1753 2162 2152 1567 1206 1140 1190 1144 1651 1484 2563 1094 2692 2117 2406 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** A0A2U1N0Z9_ARTAN) AT5G35200 Solyc07g007830.4 1877 1319 2128 2339 2013 2131 1934 1445 1337 1549 2246 1425 1432 1532 1983 BSD domain-containing protein (AHRD V3.3 *** A0A1Q3D6V5_CEPFO) Solyc07g007840.3 1310 980 687 1200 875 854 934 897 832 1106 738 868 831 984 794 SPOC domain-containing protein (AHRD V3.3 *-* A0A1Q3D798_CEPFO) Solyc07g007850.2 124 143 95 99 137 141 135 169 170 179 94 145 99 141 85 SPOC domain / Transcription elongation factor S-II protein (AHRD V3.3 *-* F4ISL5_ARATH) Solyc07g007860.1 103 1062 394 862 2130 1688 1866 2093 780 556 444 878 584 866 189 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain (AHRD V3.3 *-* A0A200PNR4_9MAGN) Solyc07g007870.3 916 1688 2190 1908 1852 2002 1935 1793 1906 1627 1993 1573 2150 2076 2133 12-oxophytodienoate reductase 3 AT2G06050 Solyc07g007880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S acidic ribosomal protein family (AHRD V3.3 *** F4IGR3_ARATH),Pfam:PF00428 Solyc07g007890.3 1104 1292 1116 1195 1129 1274 1202 1140 1221 1042 1052 1012 1419 1653 1252 CCR4-NOT transcription complex subunit 10-like (AHRD V3.3 *** A0A2I4EMI0_9ROSI) AT5G35430 Solyc07g007920.3 2 124 128 109 100 206 194 167 115 58 137 121 111 128 37 Rif1_N domain-containing protein (AHRD V3.3 *** A0A1Q3D7F4_CEPFO) Solyc07g007930.3 193 420 389 331 381 396 406 499 680 342 315 490 395 529 430 Raffinose synthase family protein (AHRD V3.3 *** F4K470_ARATH) AT5G20250 Solyc07g007940.3 249 136 162 138 105 101 115 69 111 108 135 104 112 138 329 Small nuclear RNA activating complex (SNAPc)%2C subunit SNAP43 protein (AHRD V3.3 *** AT3G53270.9) AT3G53270 Solyc07g150102.1 12 10 22 34 8 14 6 11 14 11 34 13 7 15 15 Unknown protein Solyc07g007950.1 446 386 472 420 88 117 123 82 206 287 357 214 240 274 383 Calmodulin-like protein 5 (AHRD V3.3 *** A0A1U8FML3_CAPAN) Solyc07g007960.3 466 486 494 447 456 380 515 407 408 330 475 352 513 536 502 Ubiquitin system component Cue protein (AHRD V3.3 *** Q8H1Q3_ARATH) AT5G32440 Solyc07g007970.3 161 208 253 242 222 264 244 297 181 207 281 278 212 265 192 Keratin-associated protein, putative (DUF819) (AHRD V3.3 *** Q9LTG3_ARATH) AT5G52540 Solyc07g007980.3 153 1194 1017 891 2787 2492 3037 2121 1697 435 1293 1074 960 1007 824 Protein kinase 2B (AHRD V3.3 *** A0A2K3PCK5_TRIPR) Solyc07g007990.4 41 14 30 55 8 5 3 14 17 11 34 24 42 72 49 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2U1NJJ9_ARTAN) AT4G32272 Solyc07g008000.4 568 294 430 445 284 316 319 292 403 470 448 272 421 454 351 RabGAP/TBC domain-containing protein (AHRD V3.3 *** A0A2U1MDC7_ARTAN) AT5G52580 Solyc07g008010.4 259 456 941 320 1072 1055 1295 914 682 232 897 426 415 266 436 R2R3MYB transcription factor 82 AT5G52600 Solyc07g008020.3 16 28 45 27 51 26 28 26 22 26 28 30 1 7 1 auxin-regulated 35 Solyc07g008030.3 274 303 255 342 608 693 785 609 310 376 488 605 246 267 332 Beta-1,4-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** Q9SKF0_ARATH) AT2G13290 Solyc07g008040.4 3132 2425 1516 1724 1792 1680 1802 2018 1887 1948 1260 1813 2359 2259 1961 TOPLESS 5 Solyc07g008050.4 435 436 233 476 236 286 269 337 325 397 239 326 366 350 362 Zinc finger (Ubiquitin-hydrolase) domain-containing protein (AHRD V3.3 *** A0A2U1NFG2_ARTAN) AT2G42160 Solyc07g008060.1 374 458 764 526 558 662 689 599 597 497 625 398 543 527 448 ANTH domain-containing protein (AHRD V3.3 *** A0A1Q3CQF1_CEPFO) Solyc07g008070.1 4 6 5 1 16 3 3 4 2 3 0 6 0 5 12 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* O22783_ARATH) Solyc07g008075.1 342 518 539 741 662 783 942 577 599 424 783 390 447 525 664 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *-* A0A2U1MCF4_ARTAN) Solyc07g008090.4 682 1159 623 951 1357 1142 1224 1885 1523 1145 718 1189 803 950 746 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *-* A0A1I9LQ09_ARATH) Solyc07g008100.4 839 964 752 792 860 916 783 788 928 627 615 560 635 649 554 histone acetyltransferase (AHRD V3.3 *-* AT4G32295.1) AT3G24150 Solyc07g150103.1 365 292 123 363 35 25 27 35 338 137 226 17 103 284 568 early nodulin-like protein 1 (AHRD V3.3 *** A0A2I4F529_9ROSI) AT5G20230 Solyc07g150104.1 384 342 279 472 64 27 59 46 302 250 268 43 154 357 511 early nodulin-like protein 1 (AHRD V3.3 *** A0A2I4F529_9ROSI) AT5G20230 Solyc07g008130.3 1 2 0 3 0 5 0 0 1 1 4 0 2 3 0 Cupredoxin (AHRD V3.3 *-* A0A2U1MB64_ARTAN) Solyc07g008140.3 387 55 39 99 21 14 17 17 30 60 17 12 65 273 571 Umecyanin (AHRD V3.3 *-* A0A2G2WBI2_CAPBA) AT5G20230 Solyc07g008150.3 411 265 523 405 267 294 242 283 274 357 364 316 420 349 444 Glucan endo-1,3-beta-glucosidase 11 (AHRD V3.3 *** A0A1J3HZP4_NOCCA) AT2G26600 Solyc07g008160.3 2964 2180 1898 1944 2130 2088 2463 2532 2015 2121 1600 2192 1915 1984 1674 nuclear pore complex protein NUP155 (AHRD V3.3 *** A0A2I4FD09_9ROSI) AT1G14850 Solyc07g008170.2 289 162 255 348 261 270 262 324 387 273 388 333 362 379 323 methyl-CpG-binding domain-containing protein 11-like (AHRD V3.3 *-* A0A2I4F545_9ROSI) Solyc07g008180.4 356 491 687 924 572 524 366 579 235 328 266 848 193 608 247 CRABS CLAW-like protein 5a AT2G26580 Solyc07g008190.4 6552 4478 4138 4166 2815 3201 3302 2628 3325 3687 4448 3467 3800 4347 5294 nuclear pore complex protein NUP1 (AHRD V3.3 *** A0A2I4F569_9ROSI) AT5G20200 Solyc07g008200.3 44 91 112 247 60 50 54 16 53 54 137 33 140 126 135 Equilibrative nucleotide transporter 8 (AHRD V3.3 *** A0A2G3BY58_CAPCH) AT1G02630 Solyc07g008210.4 57 9 0 114 1 0 0 0 4 0 0 0 41 56 342 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* F4K464_ARATH) AT5G20190 Solyc07g008205.1 17 31 59 52 53 65 47 32 13 11 26 34 16 22 35 EPIDERMAL PATTERNING FACTOR-like protein 8 (AHRD V3.3 *** A0A2I4H6E6_9ROSI),Pfam:PF17181 AT1G80133 Solyc07g008230.1 0 1 1 3 1 1 1 0 0 0 2 0 0 2 9 Glycosyltransferase (AHRD V3.3 *** A0A2I4GJH4_9ROSI) Solyc07g008240.3 77 135 143 150 71 105 130 117 50 86 82 31 194 86 99 Non-symbiotic hemoglobin like (AHRD V3.3 *** A0A2R6R1Q2_ACTCH) AT2G16060 Solyc07g008250.3 4562 3762 6097 6395 1711 2411 2010 1830 3748 6738 5008 2937 2045 3875 5612 F-box protein (AHRD V3.3 *** S4T6I7_CAPAN) Solyc07g008260.3 181 98 202 171 115 183 147 101 108 122 155 103 108 117 171 DUF4050 domain-containing protein (AHRD V3.3 *** A0A1Q3CR15_CEPFO) AT5G25360 Solyc07g008270.3 486 711 931 693 925 901 883 777 543 449 770 625 933 950 703 Ribosomal protein (AHRD V3.3 *** A0A2G3BY62_CAPCH) AT5G20180 Solyc07g008280.4 426 160 73 115 49 47 32 46 72 268 76 44 93 75 30 cytochrome P450 family protein (AHRD V3.3 -** AT3G15760.1) Solyc07g008290.4 0 2 5 0 1 13 3 0 0 3 0 1 0 3 0 O-fucosyltransferase family protein (AHRD V3.3 *** A0A061GA16_THECC) Solyc07g008300.3 0 0 0 8 79 37 80 68 0 1 6 4 3 1 10 Choline monooxygenase, chloroplastic (AHRD V3.3 *** A0A2G2WBE9_CAPBA) AT4G29890 Solyc07g008310.3 139 74 76 135 12 36 45 29 67 77 118 22 102 125 149 Choline monooxygenase, chloroplastic (AHRD V3.3 *** A0A2G2WBE9_CAPBA) AT4G29890 Solyc07g008320.3 4527 2684 3347 2558 1374 1584 1541 1442 2076 2995 2255 1255 3708 2904 2631 Calcium-transporting ATPase (AHRD V3.3 *** G3LY22_SOLLC) AT5G57110 Solyc07g008330.3 1160 1402 1404 802 1412 1330 1231 1152 899 592 1297 961 1485 1387 1393 Nucleolar and coiled-body phosphoprotein 1 (AHRD V3.3 *** A0A2G3BY87_CAPCH) AT5G57120 Solyc07g008340.4 2838 4420 2770 3093 3567 3350 3586 4093 2973 2684 2500 2972 4382 3939 2889 ABC transporter E family member 2 (AHRD V3.3 *** A0A1J3F317_NOCCA) Solyc07g008350.3 708 800 814 690 598 698 775 682 650 638 665 594 838 834 889 Mitochondrial outer membrane protein porin 4 (AHRD V3.3 *** A0A2G2Z131_CAPAN) AT5G57490 Solyc07g008360.2 11 7 7 4 2 0 2 2 11 14 6 2 11 9 15 4-coumarate:CoA ligase (AHRD V3.3 *** Q42879_LITER) AT3G21240 Solyc07g008370.4 3258 6020 4442 2957 4864 4596 4441 5114 3792 2609 3029 3455 6770 4961 3671 60S ribosomal protein L7 (AHRD V3.3 *** A0A1U8FIV2_CAPAN) AT2G44120 Solyc07g008373.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like (DEFL) family protein (AHRD V3.3 *** AT4G14276.1) AT5G52605 Solyc07g008375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like (DEFL) family protein (AHRD V3.3 *** AT5G52605.1) AT5G52605 Solyc07g008377.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like (DEFL) family protein (AHRD V3.3 *** AT4G14276.1) AT5G52605 Solyc07g008380.2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc07g008390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc07g008400.3 13 9 12 22 0 15 17 6 17 24 25 23 11 26 33 MAP kinase kinase kinase 45 AT3G04690 Solyc07g008410.4 81 45 46 45 5 6 4 14 30 71 9 36 51 33 10 Protein DETOXIFICATION (AHRD V3.3 *** A0A1Q3CW99_CEPFO) Solyc07g008420.3 0 0 6 0 0 0 0 0 0 0 1 0 0 0 0 Early nodulin-like protein 1 (AHRD V3.3 *** A0A1J3GM17_NOCCA) Solyc07g008430.2 1 10 44 56 34 40 31 24 4 8 10 27 7 32 31 methionyl-tRNA synthetase (AHRD V3.3 *** AT5G10695.1) Solyc07g008440.3 46 12 6 17 0 2 2 0 8 18 8 2 19 21 31 Purine permease (AHRD V3.3 *** A0A2R6QYE6_ACTCH),Pfam:PF16913 AT1G28220 Solyc07g008450.3 1004 851 698 1006 838 898 979 964 804 805 732 784 766 909 748 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1QI07_ARTAN) AT4G38120 Solyc07g008460.3 789 724 913 870 872 1050 948 778 708 512 783 743 697 954 896 Histone-lysine N-methyltransferase ASHH1 (AHRD V3.3 *** A0A2G2WBP8_CAPBA) AT1G76710 Solyc07g008470.3 74 136 201 204 162 191 178 185 172 88 181 142 134 162 213 macrophage migration inhibitory factor homolog (AHRD V3.3 *** A0A2I4FY87_9ROSI) AT5G57170 Solyc07g008475.1 84 55 94 133 91 97 95 61 71 49 86 93 78 78 83 Subtilisin-like protease-like protein (AHRD V3.3 *-* A0A2K3MPS2_TRIPR) Solyc07g008480.3 70 51 59 72 64 81 116 75 82 41 42 69 30 84 92 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8HFQ3_CAPAN) AT3G14730 Solyc07g008490.4 1070 1708 1411 1274 1494 1278 1421 1421 1347 1157 1126 1363 2021 1692 1148 RNA-binding KH domain-containing protein PEPPER (AHRD V3.3 *** A0A2G3BY91_CAPCH) AT4G26000 Solyc07g008500.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ASHH1 (AHRD V3.3 *-* A0A1U8H996_CAPAN) Solyc07g008520.3 1 1 3 4 4 2 6 3 5 5 1 1 6 1 2 Protein NRT1/ PTR FAMILY 8.1 (AHRD V3.3 *** A0A2G2WCL3_CAPBA) Solyc07g008530.1 296 383 268 328 445 383 310 445 350 372 221 424 379 328 221 Tyrosine--tRNA ligase (AHRD V3.3 *** A0A1U8H9E5_CAPAN) AT3G02660 Solyc07g008540.3 787 1081 651 920 494 388 411 413 816 412 645 957 900 1115 814 Zinc finger protein CONSTANS-LIKE 2 (AHRD V3.3 *-* COL2_ARATH) AT5G57180 Solyc07g008545.1 6 2 5 10 4 3 6 4 10 25 18 17 7 4 0 Purple acid phosphatase (AHRD V3.3 *** A0A2G2WCI9_CAPBA) Solyc07g008560.3 176 315 239 414 161 154 152 117 502 247 315 227 470 673 483 Purple acid phosphatase (AHRD V3.3 *** A0A2G2WCI9_CAPBA) Solyc07g008570.3 254 1625 469 896 752 1032 944 610 2755 4079 2664 3034 739 1189 534 Purple acid phosphatase (AHRD V3.3 *** A0A2G2WCI9_CAPBA) Solyc07g008580.3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ASHH1 (AHRD V3.3 *** A0A1U8H996_CAPAN) Solyc07g008590.1 369 241 293 194 8 29 14 46 212 505 317 79 390 236 138 receptor-like protein 12 (AHRD V3.3 *** A0A1U8F5D2_CAPAN) Solyc07g008600.1 594 334 515 168 63 41 35 30 256 466 308 132 371 211 106 receptor-like protein 12 (AHRD V3.3 *** A0A1U8F5D2_CAPAN) Solyc07g008610.3 2154 2437 1847 1847 1515 1559 1641 1662 2136 1771 1493 1872 2894 2459 1950 (DB142) meloidogyne-induced giant cell protein AT3G54540 Solyc07g008620.1 788 288 388 125 9 24 7 19 73 462 429 87 259 400 114 EIX receptor 1 Solyc07g008630.1 157 76 80 63 5 7 11 5 38 90 79 36 90 82 78 Ethylene-inducing xylanase receptor 2 Solyc07g008640.3 21 6 46 24 5 7 12 7 6 18 2 1 17 20 34 Lrr receptor-like serinethreonine-protein kinase gso2 (AHRD V3.3 *** A0A1J6IPF6_NICAT) Solyc07g008650.4 37 71 65 62 51 45 58 56 36 18 29 46 73 71 64 tRNA-specific adenosine deaminase (AHRD V3.3 *** B6T9V4_MAIZE) AT1G48175 Solyc07g008660.3 267 472 606 473 623 679 725 600 497 326 467 477 744 615 651 30S ribosomal protein S16 (AHRD V3.3 *** A0A1J3GUI0_NOCCA) AT5G56940 Solyc07g008670.3 563 2047 1748 1934 3276 3844 3612 3601 3351 1255 2151 2887 1542 2279 1509 protein LONGIFOLIA 1 (AHRD V3.3 *** A0A2I4HKE6_9ROSI) Solyc07g008673.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc07g008677.1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional nitrilase/nitrile hydratase NIT4B (AHRD V3.3 *-* A0A2G2VPR2_CAPBA) Solyc07g008680.4 0 0 0 6 0 0 0 0 0 0 0 2 0 0 0 Sesquiterpene synthase (AHRD V3.3 *-* G8H5N3_SOLLC) Solyc07g008690.3 18 5 2 0 0 0 1 0 1 2 13 1 0 2 5 Sesquiterpene synthase (AHRD V3.3 *** G8H5N3_SOLLC) Solyc07g008700.3 400 489 351 497 563 532 460 518 541 399 323 528 497 520 489 protein FAR1-RELATED SEQUENCE 9-like (AHRD V3.3 *** A0A2I4HQF4_9ROSI) AT4G38170 Solyc07g008710.3 18 21 263 286 75 67 64 37 189 99 371 189 76 152 78 MLP-like protein 43 (AHRD V3.3 *** A0A2U1L1Z2_ARTAN) Solyc07g008720.4 12397 18713 18720 13790 18498 16459 16721 16606 12452 10521 13665 14714 23046 18373 16937 Nascent polypeptide-associated complex subunit beta (AHRD V3.3 *** A0A2G3DD77_CAPCH) AT1G73230 Solyc07g008730.2 186 251 312 263 364 327 360 329 389 207 307 273 323 305 383 Pathogenesis-related homeodomain protein (AHRD V3.3 *** A0A1U8H9N2_CAPAN) AT4G29940 Solyc07g008740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 Protein kinase superfamily protein (AHRD V3.3 *-* A0A2U1ME57_ARTAN) Solyc07g008750.4 915 628 601 562 465 450 501 471 500 501 435 550 658 720 827 nuclear nucleic acid-binding protein C1D (AHRD V3.3 *** A0A2I4FPU0_9ROSI) AT5G25080 Solyc07g008760.4 1567 1416 1413 1400 753 682 869 660 793 889 1140 795 1539 1772 1724 tetratricopeptide repeat protein 27 homolog (AHRD V3.3 *** A0A2I4DPN4_9ROSI) AT5G17270 Solyc07g008770.4 2004 1254 1335 1550 1246 1444 1472 1242 1166 1768 1919 1448 1251 1539 1673 hypothetical protein (AHRD V3.3 *** AT1G16840.4) Solyc07g008780.3 820 836 522 585 685 567 576 762 730 748 516 657 978 743 630 transmembrane protein (AHRD V3.3 *** AT4G29960.1) AT4G29960 Solyc07g008790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *-* A0A2U1LDS8_ARTAN) Solyc07g008800.4 1566 2970 3286 2190 2668 3542 2667 2333 1919 1268 2062 2013 4461 3982 2825 10 kDa chaperonin (AHRD V3.3 *** A0A1U8F6X5_CAPAN) AT1G14980 Solyc07g008810.1 24 27 20 16 8 10 2 0 2 24 12 8 25 8 12 Unknown protein Solyc07g008820.3 35 105 144 147 173 204 163 165 167 91 169 121 110 136 91 Protein trichome birefringence-like 15 (AHRD V3.3 *** A0A1U8ETR8_CAPAN) AT5G64020 Solyc07g008830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JSM6_9VIRU) Solyc07g008840.3 1013 1099 1053 951 1064 1041 1118 1050 1462 1487 1432 963 1815 1192 1204 Rab-GTPase-TBC domain (AHRD V3.3 *** A0A200PLY8_9MAGN) AT4G29950 Solyc07g008850.3 300 381 337 336 357 427 403 351 322 312 258 291 421 431 337 UDP-3-O-acyl N-acetylglucosamine deacetylase (AHRD V3.3 *** A0A200QP15_9MAGN) AT1G25210 Solyc07g008860.3 703 675 460 464 396 355 351 379 411 412 350 437 792 735 554 WD40 repeat (AHRD V3.3 *** A0A200PQC1_9MAGN) AT1G71840 Solyc07g008870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g008880.3 7216 7996 5618 6244 6619 6262 6509 7167 8266 6729 4881 6693 6972 8266 6446 Pre-mRNA-processing-splicing factor 8 (AHRD V3.3 *** A0A2G2Z1B3_CAPAN) AT1G80070 Solyc07g008890.3 103 127 73 148 130 74 140 106 96 98 83 91 121 147 116 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QW33_9MAGN) Solyc07g008900.4 2401 4534 4284 4693 5150 4926 5258 5506 4959 3716 4698 4827 2888 3660 4542 Subtilisin-like protease-like protein (AHRD V3.3 *** A0A2K3P616_TRIPR) AT4G30020 Solyc07g008910.3 849 512 505 433 340 319 372 265 379 350 426 335 443 552 536 Thioredoxin superfamily protein (AHRD V3.3 *** A0A1P8BEG6_ARATH) AT5G57230 Solyc07g008920.4 15 23 86 50 27 39 29 35 19 13 24 12 30 16 42 Oxysterol-binding protein-related protein 4B (AHRD V3.3 *** A0A2G3BZ80_CAPCH) AT5G57240 Solyc07g008930.1 12 2 1 0 0 0 0 0 2 3 5 0 6 3 0 DUF4228 domain protein (AHRD V3.3 *** G7JUB6_MEDTR) Solyc07g008940.3 1574 1617 2102 2009 1785 2015 2214 1513 1265 1678 2191 1252 1688 1794 1758 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3NX74_TRIPR) AT2G19160 Solyc07g008950.4 2626 3364 2462 2575 2877 2629 2735 3305 2935 2537 1976 2868 3435 3287 2458 Unknown protein Solyc07g008970.4 984 1163 1260 1202 1295 1238 1227 1182 1161 965 998 1141 1321 1180 1321 Myosin heavy chain-related protein (AHRD V3.3 *** A0A2K3PGW2_TRIPR) Solyc07g008980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 19 (AHRD V3.3 *** A0A2G2ZPK5_CAPAN) Solyc07g008990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II D2 protein (AHRD V3.3 *-* A0A089N0G2_9POAL) Solyc07g009000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2G2ZTY9_CAPAN) Solyc07g009010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009020.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 19 (AHRD V3.3 *** A0A1S4AH79_TOBAC) Solyc07g009030.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 19 (AHRD V3.3 *** A0A1S4AH79_TOBAC) Solyc07g009040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 19 (AHRD V3.3 *** A0A1S4AH79_TOBAC) Solyc07g009050.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 19 (AHRD V3.3 *** A0A1S4AH79_TOBAC) Solyc07g009060.4 0 1 2 1 0 0 0 0 0 0 8 0 0 0 4 defensin-like protein 19 (AHRD V3.3 *** A0A1S4AH79_TOBAC) Solyc07g009070.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 19 (AHRD V3.3 *** A0A1S4AH79_TOBAC) Solyc07g009080.4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 19 (AHRD V3.3 *** A0A2G2ZPK5_CAPAN) Solyc07g009090.4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 defensin-like protein 19 (AHRD V3.3 *** A0A1S4AH79_TOBAC) Solyc07g009100.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 19 (AHRD V3.3 *** A0A1S4AH79_TOBAC) Solyc07g009110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* B6UC09_MAIZE) Solyc07g009130.4 2780 2315 1735 2936 1649 1531 1536 1583 1856 1976 1669 1213 2296 1742 2504 Cadmium/zinc-transporting ATPase HMA2 (AHRD V3.3 *** A0A2G2WC04_CAPBA) AT4G30110 Solyc07g009133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain, FBD domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *** A0A2U1MPQ0_ARTAN) Solyc07g009137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc07g009140.3 1947 2192 2003 1900 2159 1927 1833 2071 1822 1968 1750 1856 2544 2225 2026 26S proteasome non-ATPase regulatory subunit 6 (AHRD V3.3 *** A0A2G2W6A3_CAPBA) AT4G24820 Solyc07g009150.3 331 470 457 521 665 803 806 606 557 288 338 429 395 432 433 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1PBK3_ARTAN) AT5G50330 Solyc07g009160.3 647 729 961 770 874 648 749 727 644 539 810 544 975 957 1107 ER membrane protein complex subunit 8/9-like protein (AHRD V3.3 *** A0A1U8HGZ8_CAPAN) AT5G55940 Solyc07g009170.4 114 199 172 178 168 169 210 216 169 144 75 166 143 159 99 Nudix hydrolase 20, chloroplastic (AHRD V3.3 *** A0A2G2X7Y2_CAPBA) AT5G19460 Solyc07g009180.1 71 30 50 69 4 12 8 19 42 43 89 24 54 55 58 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc07g009190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc07g009200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 disease resistance RPP8-like protein 3 (AHRD V3.3 --* XP_011072174.1) Solyc07g009210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *-* B6SWF4_MAIZE) Solyc07g009220.2 171 161 193 189 180 141 179 105 139 98 106 176 190 230 190 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CTG5_CAPCH) AT2G34400 Solyc07g009230.3 8 2 1 14 0 1 1 1 0 2 0 2 3 10 24 Defensin-like protein 1 (AHRD V3.3 *** A0A2G2ZS54_CAPAN) Solyc07g009233.1 1 10 0 9 5 7 13 6 12 13 10 2 16 1 0 Unknown protein Solyc07g150105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009237.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc07g009260.3 0 0 0 1 0 0 0 0 1 0 0 0 2 1 0 Defensin-like protein 1 (AHRD V3.3 *** A0A2G3AQC7_CAPCH),Pfam:PF00304 AT1G19610 Solyc07g009265.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Defensin-like protein 1 (AHRD V3.3 -** A0A2G3AQC7_CAPCH),Pfam:PF00304 Solyc07g009270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009280.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009290.3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 defensin-like protein 1 (AHRD V3.3 *** A0A1U7W6X0_NICSY) Solyc07g009320.3 309 595 319 383 497 390 396 430 343 305 314 351 589 527 374 Mitochondrial outer membrane import complex protein METAXIN (AHRD V3.3 *** A0A2G2XVX3_CAPAN) AT2G19080 Solyc07g009330.4 878 2636 2528 1700 1948 2417 2387 2154 1831 1042 1795 1621 2985 2831 2308 60S acidic ribosomal protein P3 (AHRD V3.3 *** A0A2G2Z2E6_CAPAN) AT5G57290 Solyc07g009340.2 58 144 122 131 39 36 52 32 109 148 195 43 133 149 80 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A2G2Z282_CAPAN) Solyc07g009350.4 1365 1138 1096 865 688 854 835 775 848 613 1002 891 1216 1348 1273 U3 small nucleolar RNA-associated protein 25 (AHRD V3.3 *** A0A1J3F8A5_NOCCA) Solyc07g009360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009380.4 90 252 149 149 48 65 30 30 213 174 329 330 216 107 137 xyloglucan endotransglucosylase-hydrolase 2 Solyc07g009400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc07g009405.1 0 0 0 0 0 0 0 1 8 0 0 0 0 1 0 Unknown protein Solyc07g009410.4 21 22 4 41 15 11 20 8 32 20 44 33 48 26 23 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1J3E525_NOCCA) AT3G27150 Solyc07g009420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor protein kinase (AHRD V3.3 *-* Q40096_IPOTF) Solyc07g009430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A2G2VJL6_CAPBA) Solyc07g009435.1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009437.1 24 28 30 33 0 3 1 1 3 4 8 4 41 56 93 Receptor protein kinase (AHRD V3.3 *-* Q40096_IPOTF) Solyc07g009440.2 16 15 5 5 0 0 1 0 8 14 5 2 37 13 6 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A1U8HJL6_CAPAN) Solyc07g009443.1 179 145 65 58 23 16 10 12 50 89 47 35 317 173 151 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2Z069_CAPAN) Solyc07g009447.1 2 0 4 0 6 1 0 1 0 0 2 0 0 3 30 Serine/threonine-protein kinase STN7 chloroplastic-like (AHRD V3.3 *-* A0A2K3N0Z0_TRIPR) Solyc07g009450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009460.3 237 299 344 293 280 322 358 303 249 262 270 351 315 286 355 Phosphoesterase domain (AHRD V3.3 *** A0A200QAP7_9MAGN) AT5G57140 Solyc07g009470.3 57 40 30 26 78 59 45 46 30 30 36 26 34 8 6 GDSL esterase/lipase 2-like (AHRD V3.3 *-* A0A1S3XYZ9_TOBAC) Solyc07g009473.1 188 42 3 47 3 24 19 10 12 66 4 8 30 21 24 Unknown protein Solyc07g009477.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc07g009490.3 923 896 1033 943 1154 916 1085 889 831 823 766 813 858 763 999 Ethanolamine-phosphate cytidylyltransferase (AHRD V3.3 *** A0A2G3BYY5_CAPCH) Solyc07g009500.3 398 2 0 8 0 0 0 0 3 1 0 0 1 111 45 Chitinase 12 (AHRD V3.3 *** A0A2G2VG15_CAPBA) Solyc07g009510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Chitinase 12 (AHRD V3.3 *** A0A2G2VG15_CAPBA) Solyc07g009520.2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 WEB family protein At4g27595, chloroplastic-like (AHRD V3.3 *** A0A2I4GYN3_9ROSI) AT4G40020 Solyc07g009530.1 38 13 1 0 0 0 0 0 1 6 0 0 4 16 1 Chitinase (AHRD V3.3 *-* B8QVH4_ZEAMP) Solyc07g009540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* A0A1Q3DF32_CEPFO) Solyc07g009563.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009567.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009580.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* A0A1Q3DFT4_CEPFO) Solyc07g009583.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** Q9MAP9_ARATH) Solyc07g009585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g009587.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g014580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** Q9MAP9_ARATH) AT1G32910 Solyc07g014583.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g014587.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g014590.4 1053 868 1032 1124 810 694 819 731 992 676 942 825 864 958 1112 Isoamylase 1, chloroplastic (AHRD V3.3 *** A0A2G2Z1N4_CAPAN) AT2G39930 Solyc07g014595.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MCA5_TRIPR) Solyc07g014600.2 85 34 10 11 18 13 29 10 17 25 19 15 29 22 17 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* AT3G16200.1) Solyc07g014610.4 163 190 343 259 205 289 320 223 216 160 176 155 196 254 231 GPI ethanolamine phosphate transferase 3 (AHRD V3.3 *** A0A1J3JQN1_NOCCA) AT5G17250 Solyc07g014620.1 278 169 57 126 23 54 28 35 58 85 53 41 214 134 137 Small auxin up-regulated RNA63 Solyc07g014640.3 52 172 160 135 198 152 219 195 280 145 202 165 169 148 278 Galactokinase (AHRD V3.3 *** B6U8E6_MAIZE) AT3G10700 Solyc07g014650.3 985 802 941 853 972 1262 995 919 886 855 1086 835 846 760 987 ADP-ribosylation factor (AHRD V3.3 *** B6TBI1_MAIZE) AT2G18390 Solyc07g014660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein 17 (AHRD V3.3 *** A0A1U8F8S3_CAPAN) Solyc07g014670.3 836 713 363 284 219 145 172 149 289 718 451 212 959 539 398 Cytochrome P450 (AHRD V3.3 *-* A0A200QZM5_9MAGN) AT5G10600 Solyc07g014680.4 5 11 4 22 0 0 1 0 15 15 2 7 5 8 30 Potassium transporter (AHRD V3.3 *-* A0MNZ1_EUTHA) Solyc07g014690.3 1 6 14 5 2 1 0 0 4 9 6 0 0 0 0 Na+ transporter (AHRD V3.3 *** S0CPS1_SOLLC) AT4G10310 Solyc07g014700.4 2586 3108 2575 2492 2574 2393 2704 2671 2852 3349 2393 2685 3665 3413 2285 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (AHRD V3.3 *** A0A2G2WC86_CAPBA) AT4G21150 Solyc07g150106.1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc07g014707.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc07g014730.3 122 414 466 728 734 567 753 591 736 340 395 652 440 644 497 Phospholipase A2-alpha (AHRD V3.3 *** A0A2G2WBQ3_CAPBA) AT2G06925 Solyc07g014740.3 327 357 246 305 211 324 300 242 240 249 216 275 292 368 325 Sodium Bile acid symporter family (AHRD V3.3 *** A0A1I9LPI7_ARATH) AT3G56160 Solyc07g014750.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G3C774_CAPCH) Solyc07g150107.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g015760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g015765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g015800.1 4 4 5 4 2 6 3 2 3 6 0 6 9 0 0 F-box domain (AHRD V3.3 *** A0A200PM08_9MAGN) Solyc07g015805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g015810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3FZW5_9ROSI) Solyc07g015820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3FZZ9_COCAP) Solyc07g015830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 --* A0A1R3FZW5_9ROSI) Solyc07g015840.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g015850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3FZW5_9ROSI) Solyc07g015860.3 499 716 858 892 1000 1202 1068 984 756 652 878 722 551 681 895 peptide deformylase AF271258 AT1G15390 Solyc07g015870.4 0 1 0 0 0 1 1 2 1 0 0 0 0 1 15 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1L3E9_ARTAN) Solyc07g015873.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc07g015877.1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 Unknown protein Solyc07g015900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2K3NXM3_TRIPR) Solyc07g015905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) Solyc07g015910.4 0 3 0 0 0 0 0 0 0 0 0 0 6 0 1 WAT1-related protein (AHRD V3.3 *** K4CCA8_SOLLC) AT1G25270 Solyc07g015920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glucuronoxylan 4-O-methyltransferase 1 (AHRD V3.3 *** A0A2G2VDV8_CAPBA) AT1G27930 Solyc07g015930.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Methyl-CpG-binding domain-containing protein 2 (AHRD V3.3 *-* A0A1U8GNC1_CAPAN) AT5G35330 Solyc07g015940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g015960.1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 Transferase domain-containing protein (AHRD V3.3 *** A0A1Q3CZJ0_CEPFO) AT2G19070 Solyc07g015970.3 431 624 952 808 856 883 961 751 697 544 743 685 1017 822 714 Mitochondrial import receptor subunit TOM7-1 (AHRD V3.3 *** A0A1U8HGG2_CAPAN) AT5G41685 Solyc07g015980.4 246 235 251 309 368 311 334 342 308 306 205 262 212 272 261 Arginine decarboxylase-like protein (AHRD V3.3 *** A0A2K3MP95_TRIPR) Solyc07g015983.1 5 1 0 0 0 1 0 0 1 1 4 0 0 0 0 Unknown protein Solyc07g015987.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g015990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat receptor-like protein kinase PEPR1 (AHRD V3.3 *-* PEPR1_ARATH) Solyc07g016000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2R6Q6W2_ACTCH) Solyc07g016005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc07g016020.1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 Arginine decarboxylase-like protein (AHRD V3.3 *-* A0A2K3MP95_TRIPR) Solyc07g016030.1 0 4 13 10 0 0 0 0 0 0 0 0 1 0 0 Arginine decarboxylase-like protein (AHRD V3.3 *** A0A2K3PMD3_TRIPR) Solyc07g016040.3 3 0 0 0 0 0 0 0 0 0 2 0 0 0 0 Arginine decarboxylase-like protein (AHRD V3.3 *-* A0A2K3MP95_TRIPR) Solyc07g016050.3 0 3 0 0 0 0 0 1 0 1 0 0 0 1 0 Arginine decarboxylase-like protein (AHRD V3.3 *** A0A2K3M901_TRIPR) Solyc07g016060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT1G18780 Solyc07g150108.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like protein (AHRD V3.3 *** A0A1U8HFN5_CAPAN) Solyc07g016070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) Solyc07g016080.4 11 13 61 26 8 6 1 1 13 17 81 16 5 25 16 Arginine decarboxylase-like protein (AHRD V3.3 *** A0A2K3M901_TRIPR) Solyc07g016090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase RING1-like (AHRD V3.3 *** XP_004243067.1) AT1G18780 Solyc07g016095.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like protein (AHRD V3.3 *** A0A1U8HFN5_CAPAN) Solyc07g016100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT1G18780 Solyc07g016110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT1G18780 Solyc07g016113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like protein (AHRD V3.3 *** A0A1U8HFN5_CAPAN) Solyc07g016117.1 13 12 15 27 0 0 0 0 0 14 2 1 14 0 0 squamous cell carcinoma antigen recognized by T-cells 3 isoform X3 (AHRD V3.3 *-* XP_010314247.1) Solyc07g016120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like protein (AHRD V3.3 *** A0A1U8HFN5_CAPAN) Solyc07g016130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT1G18780 Solyc07g016140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT1G18780 Solyc07g016145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 squamous cell carcinoma antigen recognized by T-cells 3 isoform X4 (AHRD V3.3 *-* XP_010314250.1) Solyc07g016150.4 6011 6883 5702 5680 5132 4482 4691 5419 3855 4930 4266 4646 6923 6628 5902 ripening regulated protein DDTFR10 AT1G30230 Solyc07g016160.3 3 13 12 13 25 9 12 14 10 20 8 12 11 6 8 L-arabinokinase (AHRD V3.3 *-* A0A2G3AGT3_CAPAN) Solyc07g016170.4 453 912 883 944 1238 1239 1321 1220 991 798 1184 960 737 1114 998 L-arabinokinase-like (AHRD V3.3 *** A0A2I4GNX5_9ROSI) Solyc07g016180.3 6613 7699 4563 4827 5929 6031 5936 6500 7002 7670 4316 5383 5401 4667 4454 Auxin Response Factor 7A Solyc07g016200.3 2577 4174 3467 3365 4669 4399 3994 4533 3918 3120 2913 3944 4902 4008 2971 Proteasome subunit beta (AHRD V3.3 *** A0A1U8EZ62_CAPAN) AT4G31300 Solyc07g016210.1 0 2 0 0 4 1 1 0 35 19 81 34 1 3 1 Specific tissue protein (AHRD V3.3 *** A0A2K3NKN8_TRIPR) Solyc07g016215.1 15 24 1 4 0 2 1 2 5 31 16 9 6 3 19 Organ specific protein (AHRD V3.3 *** A0A2U1PWC1_ARTAN) Solyc07g017220.3 962 828 976 1221 621 783 705 566 699 683 815 540 947 773 1477 DUF581 domain-containing protein (AHRD V3.3 *** A0A1Q3AVJ7_CEPFO) Solyc07g017225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc07g017230.3 1 3 13 8 3 2 3 0 1 0 0 1 2 0 2 pollen receptor-like protein kinase 2 Solyc07g017240.1 0 0 7 0 0 3 1 1 5 1 0 0 0 0 0 Unknown protein Solyc07g017250.4 84 72 85 62 96 80 76 87 64 103 60 71 86 77 84 tRNA pseudouridine synthase (AHRD V3.3 *-* A0A328E723_9ASTE) Solyc07g017255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LF16_TRIPR) Solyc07g017260.2 104 103 70 55 104 100 69 126 107 96 91 98 133 105 93 tRNA pseudouridine synthase (AHRD V3.3 *-* A0A1Q3AW01_CEPFO) Solyc07g017280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication protein A 70 kDa DNA-binding subunit A (AHRD V3.3 *** A0A1J3E159_NOCCA) AT2G05642 Solyc07g017290.4 247 246 248 296 202 280 231 203 205 203 240 281 264 283 224 3-phosphoinositide-dependent protein kinase-1 (AHRD V3.3 *** AT3G10572.1) AT3G10572 Solyc07g150109.1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) Solyc07g150110.1 14 1 1 0 3 2 3 0 3 8 0 2 0 11 10 Unknown protein Solyc07g017300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g017310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* A0A200PW20_9MAGN) Solyc07g017320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** Q9MAP9_ARATH) Solyc07g017330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Response_reg domain-containing protein/Myb_DNA-binding domain-containing protein (AHRD V3.3 --* A0A1Q3DHP9_CEPFO) Solyc07g017340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GATA zinc finger domain-containing protein 15-like (AHRD V3.3 *** XP_025886282.1) Solyc07g150112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor, MADS-box (AHRD V3.3 *-* A0A2U1Q810_ARTAN) Solyc07g017370.3 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A2K3M171_TRIPR) Solyc07g017400.3 1420 1166 1325 1025 1033 1022 1057 1087 1023 1065 1112 1025 1093 1097 1093 26S proteasome regulatory subunit RPN13 (AHRD V3.3 *** A0A1U8H9R1_CAPAN) AT2G26590 Solyc07g017405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 heavy metal-associated isoprenylated plant protein 43-like (AHRD V3.3 --* XP_020097804.1) Solyc07g017410.3 444 416 374 396 409 304 317 289 443 339 444 375 527 422 401 hypothetical protein (AHRD V3.3 *** AT1G26750.1) AT1G26750 Solyc07g017420.1 5 1 0 0 0 2 0 1 0 0 0 6 0 0 0 Unknown protein Solyc07g017430.3 680 848 846 1104 1076 1162 1263 1133 1246 908 942 910 923 988 974 Phosphoinositide phosphatase (AHRD V3.3 *** A0A2R6QUK5_ACTCH) AT3G43220 Solyc07g017470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *** B6SN49_MAIZE) Solyc07g017490.3 1859 1277 1307 964 965 966 901 1036 1297 1144 1193 1048 1431 1443 1448 Suppressor of mec-8 and unc-52 protein-like protein 2 (AHRD V3.3 *** A0A2G2Z1E4_CAPAN) AT2G26460 Solyc07g150113.1 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 F-box protein CPR1 isoform X1 (AHRD V3.3 *-* XP_019066667.1) Solyc07g017500.3 447 341 239 294 358 303 290 312 356 375 236 365 381 366 265 FYVE zinc finger (AHRD V3.3 *** A0A200QD36_9MAGN) AT3G43230 Solyc07g017510.3 1864 1481 1556 1708 1354 1445 1600 1495 1864 1819 1828 1420 1404 1980 2827 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B (AHRD V3.3 *** A0A2G2WC08_CAPBA) Solyc07g017520.4 325 304 336 381 332 377 395 272 235 202 348 212 364 365 404 conserved oligomeric Golgi complex subunit 3 (AHRD V3.3 *-* A0A2I4FHP6_9ROSI) Solyc07g017530.4 253 236 122 179 239 238 195 215 190 217 189 197 224 272 171 Conserved oligomeric Golgi complex subunit 3 (AHRD V3.3 *-* A0A1J3I1P6_NOCCA) Solyc07g150114.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g017540.4 102 154 88 125 182 194 155 216 117 140 112 175 66 146 55 LEU22441 LeRAD51 AT5G20850 Solyc07g017545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc07g017560.4 0 1 13 0 0 0 3 4 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G3BYR4_CAPCH) Solyc07g017570.2 1 1 0 5 0 0 0 0 0 1 0 0 0 0 0 defensin-like protein 1 (AHRD V3.3 -** A0A1S3YK59_TOBAC) Solyc07g017590.1 55 33 34 25 34 25 12 22 12 46 28 33 18 27 5 Unknown protein Solyc07g017600.3 207 637 953 477 229 247 247 212 391 372 786 188 435 486 493 Pectinesterase (AHRD V3.3 *** A0A1U8F5L9_CAPAN) AT4G33220 Solyc07g017605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VA19_9ASPA) Solyc07g017610.3 2440 1012 616 744 47 53 36 60 589 1780 553 359 1417 941 1143 Saccharopine dehydrogenase / Homospermidine synthase (AHRD V3.3 *** A0A200PV89_9MAGN) AT4G33150 Solyc07g017640.2 521 604 442 537 482 452 476 493 600 449 444 597 485 545 387 Lariat debranching enzyme (AHRD V3.3 *** A0A2G3BR26_CAPCH) AT4G31770 Solyc07g017660.3 48 35 44 31 28 26 43 41 47 45 17 49 35 29 22 Alpha-aminoadipic semialdehyde synthase (AHRD V3.3 *-* A0A2G2Z2F6_CAPAN) Solyc07g017670.3 33 14 28 12 5 8 15 6 13 12 5 20 10 16 5 lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme (AHRD V3.3 *-* AT4G33150.4) Solyc07g017675.1 279 173 235 178 148 195 187 119 144 142 239 143 174 170 233 Lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme (AHRD V3.3 *-* A0A2U1NQS7_ARTAN) Solyc07g017700.3 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 Haloacid dehalogenase-like hydrolase (AHRD V3.3 *** A0A2K3L580_TRIPR) Solyc07g017710.1 2 0 0 0 0 0 0 0 0 0 9 0 0 0 0 Tac7077 (AHRD V3.3 *-* I6M4X5_SORPR) Solyc07g017730.3 30 44 169 131 111 87 50 45 86 70 170 24 46 69 98 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A1U8GGG9_CAPAN) Solyc07g017750.4 1627 1324 1229 1197 1283 1405 1264 1271 1100 1225 1066 1361 1449 1515 1250 Adagio-like protein 1 (AHRD V3.3 *** A0A1U8H9V5_CAPAN) AT5G57360 Solyc07g017760.1 252 335 244 575 478 363 476 635 404 456 322 343 332 376 334 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QZ38_9MAGN) AT2G18940 Solyc07g017770.3 309 461 410 385 799 750 754 810 442 408 327 648 476 462 304 Homogentisate phytyltransferase 1, chloroplastic (AHRD V3.3 *** A0A2G3BZA2_CAPCH) AT2G18950 Solyc07g017780.4 4262 3493 3541 4716 1058 897 867 631 2637 3225 4169 946 5618 3613 6898 (DB226) meloidogyne-induced giant cell protein AT2G18960 Solyc07g017785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc07g017800.4 635 500 248 387 497 512 457 535 379 779 303 419 617 322 211 Unknown protein Solyc07g017805.1 5 3 2 1 0 5 2 1 2 2 0 0 2 16 2 Unknown protein Solyc07g017820.3 4 5 11 7 11 4 2 2 5 3 0 3 0 8 11 Unknown protein Solyc07g017825.1 26 54 47 39 51 47 61 59 34 38 80 23 41 48 21 Unknown protein Solyc07g017860.3 192 499 434 540 563 627 550 681 662 398 540 460 618 559 658 Acetyl-coenzyme A synthetase (AHRD V3.3 *** A0A0K9R5X9_SPIOL) Solyc07g017870.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BnaC09g32870D protein (AHRD V3.3 *** A0A078GHG9_BRANA) AT5G57340 Solyc07g017880.4 13 12 11 22 0 0 0 0 3 49 44 2 18 12 12 Peroxidase (AHRD V3.3 *** K4CCK2_SOLLC) AT4G30170 Solyc07g017900.3 1022 1380 1160 1522 1781 1597 1581 1735 1495 1661 1022 1678 1625 1393 1427 Glucose-6-phosphate 1-epimerase (AHRD V3.3 *** A0A2I0WBC4_9ASPA) AT5G57330 Solyc07g017903.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g017905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposon Ty3 gag-pol polyprotein (AHRD V3.3 *-* A0A2K3L5T3_TRIPR) Solyc07g017907.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 asparagine-rich protein-like (AHRD V3.3 --* XP_020397117.1) Solyc07g017920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ASHH1 (AHRD V3.3 *-* A0A1U8H996_CAPAN) Solyc07g017930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g150115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g017940.1 697 1189 1332 849 805 1226 913 867 1020 563 1303 905 1396 1211 1387 ribosomal RNA processing protein 1 homolog (AHRD V3.3 *-* A0A2I4GLN2_9ROSI) AT5G20600 Solyc07g017950.3 1 4 3 7 0 3 2 0 1 1 21 2 1 1 7 Ribulose bisphosphate carboxylase small chain (AHRD V3.3 *** A0A1Q3CZK4_CEPFO) Solyc07g150116.1 748 572 1068 975 778 1258 1111 702 366 617 855 509 935 758 1072 Unknown protein Solyc07g017960.4 2206 1536 1172 1025 1274 989 1080 1580 1209 1647 1139 1356 1701 1409 1261 Unknown protein Solyc07g017970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Thaumatin (AHRD V3.3 *** A0A2U1PDY4_ARTAN) Solyc07g017975.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc07g017980.1 1 2 1 1 0 0 1 0 0 1 0 1 8 7 0 protein PELPK1 (AHRD V3.3 --* XP_004242916.1) AT5G09520 Solyc07g017990.3 661 377 242 178 135 149 121 259 286 493 92 263 409 280 138 DNA ligase (AHRD V3.3 *** V4LG43_EUTSA) Solyc07g018000.3 1784 963 874 835 382 423 501 308 619 768 741 606 1137 904 1072 DNA ligase 4 (AHRD V3.3 *** A0A2G2Y445_CAPAN) AT5G57160 Solyc07g018005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc07g018010.3 113 296 328 200 231 184 188 229 450 420 371 297 366 322 319 bHLH transcription factor139 AT5G57150 Solyc07g018020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g018023.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc07g018027.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L8G7_TRIPR) Solyc07g018030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g018040.1 65 39 69 38 57 20 68 32 36 31 26 31 33 31 26 Unknown protein Solyc07g018070.4 1309 2639 2454 2480 5184 5189 5104 5147 3418 1521 2105 2604 2790 2972 2271 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B592_ARATH) Solyc07g018075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc07g018090.4 510 352 484 566 365 471 514 308 327 430 472 322 350 408 453 Protein CLEC16A-like protein (AHRD V3.3 *-* A0A1J3IQ98_NOCCA) Solyc07g018100.2 333 233 172 201 191 170 220 271 276 253 203 226 174 275 239 Protein CLEC16A-like protein (AHRD V3.3 *** A0A1J3E733_NOCCA) AT3G28430 Solyc07g018130.2 0 0 0 0 0 0 5 0 0 1 0 5 0 0 1 ABC transporter (AHRD V3.3 *** A0A200R4I7_9MAGN) Solyc07g018135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g018140.3 54 81 43 102 129 77 79 76 83 64 58 92 54 70 62 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1MSN8_ARTAN) AT2G18890 Solyc07g018143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g018145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like protein 22 (AHRD V3.3 -** A0A2I0VSB5_9ASPA) Solyc07g018147.1 0 2 3 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc07g018180.3 91 92 155 126 61 91 41 49 60 81 109 130 85 94 35 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *** G7KRB1_MEDTR) Solyc07g018190.4 278 140 96 142 4 10 6 1 74 24 115 36 86 102 272 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *** G7KRB1_MEDTR) Solyc07g018200.1 2 0 0 0 0 3 0 0 2 7 12 0 4 0 0 Hexosyltransferase (AHRD V3.3 *** A0A2G2WCW8_CAPBA) AT5G57500 Solyc07g018210.3 52 104 143 140 107 149 161 60 84 78 163 61 129 73 94 Protein YIPF (AHRD V3.3 *** A0A200QPQ2_9MAGN) AT4G30260 Solyc07g018220.3 56 86 146 95 99 157 133 114 82 68 154 99 111 134 92 Protein YIPF (AHRD V3.3 *** A0A200QPQ2_9MAGN) AT4G30260 Solyc07g018230.2 212 237 146 351 304 180 284 250 146 217 214 246 192 229 218 Protein YIPF (AHRD V3.3 *** A0A2G3BKA5_CAPCH) Solyc07g018240.1 221 1450 816 1252 1601 1363 1168 1414 1033 659 615 1133 609 870 264 elongation of fatty acids protein 3-like (AHRD V3.3 *** A0A2I4E461_9ROSI) AT3G06470 Solyc07g018250.1 18 43 52 67 125 45 36 88 40 62 33 56 17 45 13 elongation of fatty acids protein 3-like (AHRD V3.3 *** A0A2I4E461_9ROSI) Solyc07g018270.3 185 290 356 396 401 437 511 461 485 338 375 329 313 324 371 VIN3-like protein 2 (AHRD V3.3 *** A0A2I4FHF7_9ROSI) AT4G30200 Solyc07g018290.4 304 655 691 608 683 708 757 494 1025 557 973 461 484 729 781 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2U1PB27_ARTAN) AT5G57390 Solyc07g018300.3 76 978 755 706 1166 1030 1150 1195 729 405 608 854 637 1009 277 Replication protein A 32 kDa subunit A (AHRD V3.3 *** A0A1J3JLU8_NOCCA) AT3G02920 Solyc07g018310.4 0 0 0 0 1 0 3 0 3 0 0 0 1 0 0 oxysterol-binding 4B-like protein (AHRD V3.3 --* AT4G25845.1) Solyc07g018320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g018325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc07g018340.3 270 374 242 220 359 339 251 460 499 447 151 383 262 345 179 DNA mismatch repair protein MutS (AHRD V3.3 *-* A0A200PNX5_9MAGN) Solyc07g018350.2 1064 1216 1223 1334 1338 1529 1455 1447 1305 1352 1091 1289 1354 1347 1223 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200PNX5_9MAGN) AT3G24495 Solyc07g018360.3 3102 4384 3162 2715 3629 3351 3246 4181 4506 3265 3180 3410 2784 4212 3829 Elongation factor Ts, mitochondrial (AHRD V3.3 *** A0A2G2WCF0_CAPBA) AT4G29060 Solyc07g018370.3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 protein SPEAR1-like (AHRD V3.3 *-* A0A2I4E6D8_9ROSI) AT4G28840 Solyc07g018380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g150117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein I (AHRD V3.3 *** A0A2G2ZYB4_CAPAN) Solyc07g018390.3 14 8 2 9 12 5 14 2 10 6 9 7 10 12 46 Unknown protein Solyc07g018393.1 25 9 27 11 20 15 29 17 21 24 20 15 9 4 3 Unknown protein Solyc07g018397.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *-* A0A2G3BA50_CAPCH) Solyc07g018430.3 3 0 3 0 0 0 3 0 0 0 1 0 1 0 0 Unknown protein Solyc07g018433.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g018437.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g019430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g019433.1 0 1 0 0 12 0 0 2 1 0 0 0 0 3 7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MRU3_TRIPR) ATMG00240 Solyc07g019437.1 4 2 9 9 4 13 18 6 4 8 13 4 7 8 46 Unknown protein Solyc07g019440.3 1635 1411 1348 1579 1438 1316 1436 1495 1496 1699 1325 1641 1518 1462 1438 ADP-glucose pyrophosphorylase large subunit 2 AT1G27680 Solyc07g019450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 auxin-regulated IAA33 AT5G57420 Solyc07g019460.3 4247 5699 2318 2975 5035 4442 4105 5442 4521 6790 1614 4291 4089 2459 1216 NADPH--cytochrome P450 reductase (AHRD V3.3 *** A0A2G2WCH2_CAPBA) AT4G30210 Solyc07g019465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc07g019480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 related to vernalization1 1 (AHRD V3.3 *-* AT1G49480.3) Solyc07g019490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g019493.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc07g019497.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc07g019498.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxisome biogenesis protein 2 (AHRD V3.3 *-* A0A2G2X6N8_CAPBA) Solyc07g019500.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g019510.4 0 0 4 0 0 0 0 0 1 0 0 0 0 0 2 Cytochrome c oxidase subunit 1 (AHRD V3.3 *** A0A2G2UVY6_CAPBA) Solyc07g019520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g019530.3 1103 1280 1558 1430 1838 2002 1854 2131 1677 1303 1525 1801 1554 1420 1271 Afadin/alpha-actinin-binding protein (AHRD V3.3 *** A0A2U1PE59_ARTAN) AT5G57410 Solyc07g019550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* A0A200PW20_9MAGN) Solyc07g019560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator ORR23 (AHRD V3.3 --* ORR23_ORYSJ) Solyc07g019570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g150118.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3CGA7_CAPCH) Solyc07g019577.1 0 16 0 10 201 212 314 162 8 6 24 4 15 6 20 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc07g019620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Lysine--tRNA ligase (AHRD V3.3 *-* A0A2G3CAI2_CAPCH) Solyc07g019625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc07g019630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g150119.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g019640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3D6E9_CAPCH) Solyc07g019650.4 404 543 522 506 640 782 633 638 547 431 547 491 306 516 556 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1QJ22_ARTAN) Solyc07g019670.4 637 563 711 723 323 355 317 377 552 871 510 390 1308 809 803 Peroxisomal fatty acid beta-oxidation multifunctional protein (AHRD V3.3 *** B6SXV4_MAIZE) AT4G29010 Solyc07g020710.3 685 474 504 334 364 346 328 360 474 527 470 313 743 552 300 Protein tesmin/TSO1-like CXC 5 (AHRD V3.3 *** A0A2G3BNP4_CAPCH) AT4G29000 Solyc07g020730.1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 leucine-rich repeat receptor protein kinase EMS1-like (AHRD V3.3 *-* A0A1S3XBR4_TOBAC) Solyc07g020735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g020780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g020790.4 334 400 479 672 709 752 671 651 457 724 518 921 438 405 957 plastidic glucose translocator 3 AT1G67300 Solyc07g020795.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g020800.3 262 545 618 686 1341 1160 1200 1216 572 513 618 847 464 567 394 Rac-like GTP binding protein (AHRD V3.3 *** Q9S821_PHYPA) AT4G28950 Solyc07g020830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g020840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposon protein Pong sub-class (AHRD V3.3 *-* B6TCG7_MAIZE) Solyc07g020850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposon protein Pong sub-class (AHRD V3.3 *-* B6TCG7_MAIZE) Solyc07g020860.3 10513 5248 6302 5341 5026 4848 4590 5724 5895 5476 5734 5366 4485 4656 6182 Peroxiredoxin (AHRD V3.3 *** Q8S3L0_POPPZ) AT1G65980 Solyc07g020865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc07g020870.3 4 17 42 21 0 2 0 4 18 34 20 47 4 16 26 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A200QDL2_9MAGN) Solyc07g020880.1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase Cx32 (AHRD V3.3 --* B6SUF3_MAIZE) Solyc07g020890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phospholipase-like protein (AHRD V3.3 *-* A0A2U1KY47_ARTAN) Solyc07g020900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *-* F4JN38_ARATH) Solyc07g020910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tudor/PWWP/MBT superfamily protein (AHRD V3.3 *-* A0A1P8ART9_ARATH) Solyc07g020915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1NWJ9_ARTAN) Solyc07g020920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phospholipase-like protein (AHRD V3.3 *-* A0A2U1NKG6_ARTAN) AT5G11140 Solyc07g020925.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc07g020960.3 1603 1393 1805 1727 1431 1239 1317 1200 1549 1408 1493 1095 1657 1476 1789 bHLH transcription factor140 AT4G29100 Solyc07g020965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein PLANT CADMIUM RESISTANCE 2-like (AHRD V3.3 *-* A0A1U8FPF0_CAPAN) Solyc07g020980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g020990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase-like protein (AHRD V3.3 *-* A0A2K3PA68_TRIPR) Solyc07g021000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FLOWERING LOCUS D (AHRD V3.3 *-* Q52ZH9_PEA) Solyc07g021020.4 0 6 26 0 0 0 3 1 0 0 0 0 0 0 0 Glyoxal oxidase-like (AHRD V3.3 *** Q8S198_ORYSJ) AT1G67290 Solyc07g021030.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc07g021040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase (AHRD V3.3 *-* A0A2U1MN94_ARTAN) Solyc07g021050.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase TOR (AHRD V3.3 *-* A0A078GXJ0_BRANA) Solyc07g021070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein CPR30-like (AHRD V3.3 --* XP_021692480.1) Solyc07g021080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 --* XP_012076214.1) Solyc07g021100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021105.1 0 0 0 3 0 0 2 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc07g021110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf2 (AHRD V3.3 *-* A0A0S0ZMF9_9ASTE) Solyc07g021115.1 28 14 17 17 24 32 41 16 14 9 53 11 39 29 70 Cst complex subunit ctc1 (AHRD V3.3 *-* A0A314KMU1_NICAT) Solyc07g021120.3 390 330 300 371 384 375 459 430 343 387 223 309 264 353 354 Cst complex subunit ctc1 (AHRD V3.3 *** A0A314KMU1_NICAT) AT4G09680 Solyc07g021140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 enhancer of mRNA-decapping protein 4-like (AHRD V3.3 *-* A0A2I4F2H1_9ROSI) Solyc07g021150.1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 Serinc-domain containing serine and sphingolipid biosynthesis protein (AHRD V3.3 *-* A0A2U1NJ88_ARTAN) Solyc07g021155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021170.3 0 0 1 3 0 3 0 1 1 0 2 0 0 2 0 Hyp O-arabinosyltransferase-like protein (AHRD V3.3 *** AT5G13500.3) Solyc07g021180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta, chloroplastic (AHRD V3.3 *-* K4EP14_DATST) Solyc07g021190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *-* A0A2G2Z7Z2_CAPAN) Solyc07g021205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* A0A1P8D766_9DIPS) Solyc07g021210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* A0A191T453_GYNPE) Solyc07g021220.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit (AHRD V3.3 *** A0A2G3AIT5_CAPAN) Solyc07g021230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A125RTC7_9ASTR) Solyc07g021240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* PSAB_CALFG) Solyc07g021250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A0U2L1X7_OENEH) Solyc07g021260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit c, chloroplastic (AHRD V3.3 *** C1IXE4_PICSI) Solyc07g021270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit a, chloroplastic (AHRD V3.3 *** A0A2G2ZQB4_CAPAN) Solyc07g021280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2 (AHRD V3.3 *** H2BC67_PORAR) Solyc07g021290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2G2ZTM2_CAPAN) Solyc07g021300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HNH endonuclease (AHRD V3.3 *-* A0A200QER8_9MAGN) Solyc07g150120.1 110 123 352 579 40 27 27 34 143 58 391 44 202 182 877 Unknown protein Solyc07g021350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box-like/WD repeat-containing protein tbl1xr1-like (AHRD V3.3 *-* A0A2K3NSI6_TRIPR) Solyc07g021360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box-like/WD repeat-containing protein TBL1XR1 (AHRD V3.3 *-* A0A1U8EY19_CAPAN) Solyc07g021370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit b, chloroplastic (AHRD V3.3 *** A0A2G2ZYA3_CAPAN) Solyc07g021400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* A0A2U1PR79_ARTAN) Solyc07g021410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exostosin-like (AHRD V3.3 *** A0A200QSE2_9MAGN) Solyc07g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc07g021440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A1U8GMX8_CAPAN) Solyc07g021450.3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CFE3_CAPCH) Solyc07g021460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QSE6_9MAGN) Solyc07g150122.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VPM4_9ASPA) ATMG00810 Solyc07g021465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g150123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021490.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein disulfide-isomerase (AHRD V3.3 *-* A0A1U8GVQ2_CAPAN) Solyc07g021500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021505.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *-* Q0WNN6_ARATH) Solyc07g021510.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) Solyc07g021515.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021540.3 1229 965 740 829 695 688 607 876 832 1439 886 809 1345 871 743 GRAM domain-containing protein (AHRD V3.3 *** A0A1Q3BG17_CEPFO) AT1G28200 Solyc07g021550.3 306 314 314 377 351 387 454 343 401 357 533 379 350 402 504 Protein EFFECTOR OF TRANSCRIPTION 2 (AHRD V3.3 *** ET2_ARATH) AT5G56780 Solyc07g021570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021610.1 936 833 940 757 803 773 750 758 574 827 774 790 773 934 621 Unknown protein Solyc07g021620.1 425 280 266 328 247 190 213 273 322 535 343 349 221 234 211 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QLP1_9MAGN) Solyc07g021630.3 341 165 105 85 75 99 76 98 73 260 56 24 196 114 80 SlBCAT2 AT1G10070 Solyc07g021640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Prolycopene isomerase, chloroplastic (AHRD V3.3 *-* A0A1J3K340_NOCCA) Solyc07g021650.3 354 293 321 286 305 352 293 264 242 274 339 263 329 268 234 Unknown protein Solyc07g021660.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin-conjugating enzyme (AHRD V3.3 *** B3TLZ3_ELAGV) Solyc07g021670.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SUMO-conjugating enzyme SCE1 (AHRD V3.3 *-* A0A2I4E2V1_9ROSI) Solyc07g021700.3 254 291 605 557 496 570 637 463 421 384 769 339 286 249 720 Pollen-specific protein SF21 (AHRD V3.3 *** A0A1U8HG74_CAPAN) AT5G56750 Solyc07g021710.3 7 32 43 38 26 83 41 46 14 19 24 32 16 11 27 Inorganic pyrophosphatase 1 (AHRD V3.3 *** A0A2G2ZBE0_CAPAN) Solyc07g021730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g021740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *** A0A2U1LVQ4_ARTAN) Solyc07g021750.1 520 507 375 792 717 595 612 734 418 960 387 768 541 419 359 Cytidine deaminase 1 (AHRD V3.3 *** A0A2G3CQ34_CAPCH) AT2G19570 Solyc07g022760.4 3194 2995 2593 1981 2404 2502 2319 3052 2746 2533 3032 2646 2694 2895 3240 Pre-mRNA-processing protein 40A (AHRD V3.3 *** A0A2G2XIJ4_CAPBA) AT1G44910 Solyc07g022770.1 154 180 100 85 109 78 99 135 162 130 51 122 103 110 105 Calcium-transporting ATPase (AHRD V3.3 *-* A0A1U8EJF7_CAPAN) Solyc07g022780.2 157 166 101 69 112 111 71 142 145 167 58 120 109 131 64 Calcium-transporting ATPase (AHRD V3.3 *-* A0A1U8EJF7_CAPAN) Solyc07g022790.4 1067 912 788 904 740 865 910 789 824 841 785 815 911 933 857 Calcium-transporting ATPase (AHRD V3.3 *** A0A2G2VA10_CAPBA) Solyc07g022800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g022805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g022810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g022815.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g022830.3 387 277 369 446 441 401 476 411 228 309 346 209 418 308 442 EXS (AHRD V3.3 *** A0A200R094_9MAGN) AT5G35730 Solyc07g022840.1 3 0 0 2 2 2 0 0 0 2 5 0 3 0 0 DUF620 family protein (DUF620) (AHRD V3.3 *** F4HXG1_ARATH) AT1G75160 Solyc07g022850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lipoxygenase (AHRD V3.3 *-* K4B0V7_SOLLC) Solyc07g022860.4 1357 1354 1571 1466 1154 1381 1453 1103 1204 1159 1583 1143 1219 1437 1784 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* Q8RXT2_ARATH) AT4G32350 Solyc07g022880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein mitochondrial-like (AHRD V3.3 *-* A0A2K3MN72_TRIPR) Solyc07g022890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g022900.4 101 199 233 233 511 527 484 510 258 293 222 182 82 111 257 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G2V6L4_CAPBA) AT1G45474 Solyc07g022910.3 565 355 928 481 148 241 204 328 110 515 122 60 539 117 538 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *** A0A2G2VC40_CAPBA) AT2G26570 Solyc07g022915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g022920.3 442 375 492 406 414 451 485 370 356 364 402 301 338 317 480 BSD domain-containing protein (AHRD V3.3 *** A0A1Q3AM20_CEPFO) AT1G10720 Solyc07g023980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g023990.3 20 37 165 112 204 193 256 166 190 81 250 210 67 99 105 AAA-type ATPase family protein / ankyrin repeat family protein (AHRD V3.3 *** Q9C5C7_ARATH) Solyc07g024000.3 1295 594 1172 968 661 620 603 568 1045 993 1240 936 597 855 1359 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4JSA6_ARATH) AT4G13250 Solyc07g024010.2 0 0 10 11 2 0 0 1 2 7 0 1 6 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1LUI4_ARTAN) Solyc07g024020.2 1 14 2 58 5 8 0 7 9 12 12 7 26 24 19 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1LUI4_ARTAN) Solyc07g024030.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polyol monosaccharide transporter 2 Solyc07g024040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I reaction center subunit VIII (AHRD V3.3 *** A0A2U1LH37_ARTAN) ATCG00510 Solyc07g024045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g024070.3 89 493 599 524 755 913 882 680 349 285 427 530 252 491 189 Ubiquitin-conjugating enzyme (AHRD V3.3 *-* A0A200PP19_9MAGN) AT3G24515 Solyc07g024080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1LHG4_ARTAN) Solyc07g024090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1LHG4_ARTAN) Solyc07g025090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chlorophyllide a oxygenase, chloroplastic (AHRD V3.3 *-* A0A2G2ZNC5_CAPAN) Solyc07g025095.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g025100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *-* A0A1P8B253_ARATH) Solyc07g025110.1 48 56 47 80 62 69 99 60 61 62 23 104 36 95 44 F-box protein CPR1 (AHRD V3.3 --* XP_006484612.1) Solyc07g025115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g025120.1 0 0 0 0 0 0 1 0 0 0 3 0 0 0 1 Unknown protein Solyc07g025140.4 0 1 1 0 0 0 1 2 0 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PWP8_ARTAN) AT2G26490 Solyc07g025170.3 775 1019 952 921 1119 990 1068 1170 989 929 787 1102 925 1043 801 Exocyst complex component SEC3A (AHRD V3.3 *** A0A2G3C6V7_CAPCH) Solyc07g025180.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* K4BBV6_SOLLC) Solyc07g025200.1 317 462 509 417 468 457 544 457 491 301 368 376 490 417 366 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A8W3_CAPAN) Solyc07g025210.2 231 495 280 331 441 285 304 581 392 375 299 416 405 418 195 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VAF8_CAPBA) AT1G19520 Solyc07g025220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g025230.2 187 291 260 216 275 311 249 309 242 204 318 244 337 292 145 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A8W3_CAPAN) Solyc07g025250.3 188 176 92 128 84 101 87 108 126 150 83 129 117 130 115 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A1U8H647_CAPAN) Solyc07g150124.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 L-ascorbate oxidase-like protein (AHRD V3.3 *-* A0A2G2YAC6_CAPAN) Solyc07g025280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zf-CCHC domain-containing protein/MP domain-containing protein (AHRD V3.3 *-* A0A1Q3BQP9_CEPFO) Solyc07g025290.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc07g025370.3 734 582 506 639 597 507 515 503 601 666 618 573 722 630 708 Cytochrome P450 (AHRD V3.3 *** A0A200R7I2_9MAGN) AT1G75130 Solyc07g025380.3 102 674 647 486 748 820 827 772 486 253 547 533 220 637 292 DNA ligase-like protein (AHRD V3.3 *** AT1G75150.3) AT1G75150 Solyc07g025385.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g025390.4 630 831 838 842 1082 1066 963 970 669 640 784 776 766 780 676 dimethylallyl%2C adenosine tRNA methylthiotransferase (AHRD V3.3 *** AT4G33380.1) Solyc07g025400.4 245 172 250 184 139 155 180 122 144 153 250 151 250 227 316 Unknown protein Solyc07g025410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g025420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g025430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g025450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g025453.1 22 24 14 16 21 9 28 18 13 15 8 9 11 9 29 Ammonium transporter (AHRD V3.3 *-* A0A1U8G9B8_CAPAN) Solyc07g025457.1 33 41 21 22 35 30 45 46 43 33 39 45 18 42 20 40S ribosomal protein S15 (AHRD V3.3 --* A0A2G3D6Q0_CAPCH) Solyc07g025500.3 4 17 20 19 38 23 30 29 13 9 7 10 15 15 4 Unknown protein Solyc07g025510.4 236 392 448 523 517 615 502 544 524 474 539 485 407 484 517 Tetraspanin-2 (AHRD V3.3 *** A0A2G3BC56_CAPCH) AT2G19580 Solyc07g025520.3 338 250 384 340 352 389 415 334 341 246 304 313 250 296 388 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1LEQ9_ARTAN) AT4G29590 Solyc07g025530.1 27 36 25 15 51 42 30 33 24 28 31 23 27 47 25 Methyltransf_11 domain-containing protein (AHRD V3.3 *-* A0A1Q3BK19_CEPFO) Solyc07g026540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g026560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc07g026570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc07g026600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g026605.1 1 0 3 0 0 0 0 0 2 1 1 0 0 0 0 Unknown protein Solyc07g026620.4 2429 1265 1251 1362 1172 1188 1298 1161 1373 1442 1135 1444 825 1282 1113 Unknown protein Solyc07g026630.1 62 33 23 39 28 39 30 16 17 33 24 45 18 46 29 Unknown protein Solyc07g026640.3 187 187 108 251 173 171 128 162 195 215 135 233 245 232 142 fanconi anemia group E protein FANCE protein (AHRD V3.3 *** AT4G29560.1) AT4G29560 Solyc07g026650.3 1 0 21 3 0 0 0 2 0 13 35 1 0 2 0 1-aminocyclopropane-1-carboxylate oxidase 5 AT2G19590 Solyc07g026670.4 575 484 496 483 459 546 567 448 466 535 455 506 419 443 432 K(+) efflux antiporter 4 (AHRD V3.3 *** A0A2G2Z1E8_CAPAN) Solyc07g026680.2 292 155 73 159 4 4 1 7 161 174 127 46 110 105 117 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G2X3T8_CAPBA) AT5G56840 Solyc07g026690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type-like protein (AHRD V3.3 *-* Q9SZ82_ARATH) Solyc07g026700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nodulin family protein (AHRD V3.3 *-* A0A2K3N7Z0_TRIPR) Solyc07g026705.1 49 32 10 43 20 20 42 42 61 26 48 55 31 53 18 purine permease 1-like (AHRD V3.3 *** A0A1S4AAJ7_TOBAC) Solyc07g026710.3 202 106 184 95 85 136 159 121 104 79 190 119 111 157 169 Unknown protein Solyc07g026720.3 104 56 83 50 33 35 46 37 31 68 67 53 46 55 26 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G3BHE9_CAPCH) Solyc07g026730.1 93 45 30 39 59 58 42 31 40 56 58 64 47 56 15 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G2YP10_CAPAN),Pfam:PF13246 Solyc07g026740.1 11 15 24 4 13 9 11 14 7 19 1 4 5 11 1 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G2YP10_CAPAN) Solyc07g026770.3 1836 2048 2449 1936 1995 2042 1871 1620 1638 1708 2229 1712 2239 2034 2738 ATP synthase subunit G mitochondrial-like (AHRD V3.3 *** A0A2K3PQ81_TRIPR) AT4G29480 Solyc07g026780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g026800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 L-type lectin-domain containing receptor kinase S.4 (AHRD V3.3 *-* A0A1U8EIV0_CAPAN) AT1G07460 Solyc07g026810.3 1354 921 1182 1078 856 1030 1055 827 970 818 1116 709 1034 1052 1374 Chaperone protein dnaJ (AHRD V3.3 *** A0A2K3P9F4_TRIPR) AT5G49580 Solyc07g026860.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 asparagine-rich protein-like (AHRD V3.3 *-* XP_020397117.1) Solyc07g026865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g026870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g026873.1 52 13 32 16 35 32 51 26 30 31 58 15 30 43 43 Heavy metal-associated isoprenylated plant protein 26 (AHRD V3.3 *-* A0A2G2ZMM7_CAPAN) Solyc07g026877.1 5 5 3 6 16 3 1 0 4 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G2X2A1_CAPBA) Solyc07g026880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *-* A0A2G2VHS3_CAPBA) Solyc07g026890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acylsugar acyltransferase (AHRD V3.3 *-* A0A288PT67_9SOLA) Solyc07g026893.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc07g026897.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g026900.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3 *** A8ASI7_CUCSA) AT4G26200 Solyc07g026910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic (AHRD V3.3 *** A0A1U8QDA9_CAPAN) Solyc07g026915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lignin-forming anionic peroxidase (AHRD V3.3 *-* A0A2G3CEU6_CAPCH) Solyc07g026920.1 13 3 0 0 0 0 0 0 0 0 0 0 0 11 0 Major facilitator superfamily protein (AHRD V3.3 *-* F4K1G9_ARATH) Solyc07g026930.3 101 10 32 6 3 6 5 0 3 9 5 2 1 25 15 Unknown protein Solyc07g026960.3 2395 2192 2540 2387 2687 2500 2544 2614 2612 2625 2258 2499 2213 2214 2479 xaa-Pro dipeptidase (AHRD V3.3 *** A0A2I4EI13_9ROSI) AT4G29490 Solyc07g026990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc07g027000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine proteinases superfamily protein (AHRD V3.3 --* AT3G49340.1) Solyc07g027010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha (AHRD V3.3 *-* Q34265_CALUS) Solyc07g027020.4 1120 653 777 809 446 455 413 399 770 759 796 574 568 855 1248 Proline-rich receptor-like protein kinase PERK13 (AHRD V3.3 *** A0A1U8GM75_CAPAN) Solyc07g032020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032023.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3MQ83_TRIPR),Pfam:PF17919 Solyc07g032027.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032070.3 39 31 24 15 15 14 14 25 15 21 22 14 26 19 10 Unknown protein Solyc07g032080.3 6 8 17 19 6 18 9 17 25 79 67 29 50 29 32 V-type proton ATPase subunit a (AHRD V3.3 *** A0A200RCE4_9MAGN) Solyc07g032090.4 2103 1514 1742 1479 1455 1347 1376 1349 1351 1492 1733 1469 1691 1582 1962 transcription initiation factor IIF subunit beta-like (AHRD V3.3 *** A0A2I4GIX2_9ROSI) AT1G75510 Solyc07g032100.3 1236 2786 2547 2389 2841 3053 3207 3152 2783 2177 2310 2420 2486 2465 2216 Coatomer subunit alpha (AHRD V3.3 *** A0A2G2Z2H7_CAPAN) AT1G62020 Solyc07g032105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g032110.3 1078 914 871 843 927 931 949 988 855 981 904 876 918 909 818 SH3 domain-containing protein (AHRD V3.3 *** A0A2U1NRE5_ARTAN) Solyc07g032130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycerate dehydrogenase HPR, peroxisomal (AHRD V3.3 *-* A0A2G2WJW2_CAPBA) Solyc07g032140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *-* A0A2U1NVP6_ARTAN) Solyc07g032150.3 23 23 59 36 37 32 36 27 19 25 39 35 33 35 62 Unknown protein Solyc07g032155.1 778 630 516 600 458 389 440 409 583 585 229 488 295 624 412 Unknown protein Solyc07g032170.3 1002 585 574 665 374 436 605 285 535 427 528 475 433 758 545 1-acylglycerol-3-phosphate O-acyltransferase (AHRD V3.3 *-* A0A2G2YMS0_CAPAN) Solyc07g032180.3 854 486 642 732 351 462 586 262 349 308 637 377 445 585 1056 1-acylglycerol-3-phosphate O-acyltransferase (AHRD V3.3 *** A0A2G2YMS0_CAPAN) Solyc07g032220.3 702 456 610 615 502 671 648 464 394 338 692 383 403 390 648 Phospholipase A2-gamma (AHRD V3.3 *** A0A2G3BYR8_CAPCH) AT2G19690 Solyc07g032230.3 1015 873 1797 1014 763 768 867 600 1023 846 1770 619 1047 1032 1172 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* F4ITF9_ARATH) AT2G19710 Solyc07g032240.3 469 611 590 450 574 723 649 585 430 362 384 438 651 685 518 Protein arginine N-methyltransferase (AHRD V3.3 *** A0A1Y1IG62_KLENI) AT4G29510 Solyc07g032250.4 119 354 294 305 267 323 356 275 308 172 298 266 653 490 386 nucleophosmin (AHRD V3.3 *** AT4G29520.1) AT4G29520 Solyc07g032260.3 1070 882 899 912 658 784 757 608 799 559 891 749 1197 1160 1266 SNF2 domain protein (AHRD V3.3 *-* AT5G11780.1) Solyc07g032290.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tryptophan/tyrosine permease (AHRD V3.3 *-* AT2G33260.1) Solyc07g032300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease SBT3.3 (AHRD V3.3 *-* A0A2G3CXW5_CAPCH) Solyc07g032310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease SBT3.3 (AHRD V3.3 *-* A0A2G3CXW5_CAPCH) Solyc07g032370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032380.4 1039 703 509 475 867 922 794 930 624 951 543 570 401 283 405 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2Z1L2_CAPAN) Solyc07g032390.2 9 0 10 18 12 2 2 9 8 9 12 0 1 1 4 Unknown protein Solyc07g032395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *-* I6N9B3_DATST) Solyc07g032430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *-* A0A1B0ZDM9_SCHCH) Solyc07g032450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b6 (AHRD V3.3 *-* A0A0K0M2D8_9ASTR) Solyc07g032470.1 139 90 132 87 119 70 50 53 70 81 69 73 65 86 77 Unknown protein Solyc07g032480.3 1093 670 808 608 333 417 418 292 518 681 967 352 886 677 804 cyclinT1_2 Solyc07g032490.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AZ04_ARATH) AT2G26690 Solyc07g032510.3 480 328 185 252 313 247 185 307 241 257 126 280 395 358 164 Forkhead-associated (FHA) domain (AHRD V3.3 *** A0A200QTD2_9MAGN) AT3G54350 Solyc07g032530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032590.1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 Arginine decarboxylase-like protein (AHRD V3.3 *-* A0A2K3MP95_TRIPR) Solyc07g032595.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032610.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Oxygen-evolving enhancer protein 1, chloroplastic (AHRD V3.3 *-* A0A2G3D8U1_CAPCH) Solyc07g150125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oxygen-evolving enhancer protein 1, chloroplastic (AHRD V3.3 *-* A0A1U8FJN4_CAPAN) Solyc07g032623.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJX1_9ASPA) ATMG00810 Solyc07g032627.1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 Oxygen-evolving enhancer protein 1, chloroplastic (AHRD V3.3 *-* A0A1U8FZN5_CAPAN) Solyc07g032670.3 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032680.1 0 0 0 2 0 0 0 4 0 0 0 0 0 0 1 Unknown protein Solyc07g032683.1 10 0 20 3 0 0 1 0 0 4 1 0 2 2 9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VPM4_9ASPA) Solyc07g032687.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g032710.4 554 535 380 447 723 717 581 681 545 696 411 669 409 392 403 hypothetical protein (AHRD V3.3 *-* AT5G42710.3) AT3G24630 Solyc07g032730.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Rop guanine nucleotide exchange factor 12 (AHRD V3.3 *** A0A2G2X3H0_CAPBA) Solyc07g032740.4 1787 1607 1962 1685 1801 1763 1659 2070 1372 1515 1356 1682 1891 1841 1798 Aspartate aminotransferase (AHRD V3.3 *** A0A0J8BGE0_BETVU) Solyc07g032770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein ROOT PRIMORDIUM DEFECTIVE 1 (AHRD V3.3 *-* A0A2G2ZBC1_CAPAN) Solyc07g032780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein ROOT PRIMORDIUM DEFECTIVE 1 (AHRD V3.3 *-* A0A2G2ZBC1_CAPAN) Solyc07g032781.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 protein trichome birefringence-like 38 (AHRD V3.3 --* XP_004229160.1) Solyc07g032782.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zf-RVT domain-containing protein (AHRD V3.3 *-* A0A1Q3DJQ9_CEPFO) Solyc07g150126.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VXM7_9ASPA) ATMG00810 Solyc07g032784.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc07g150127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *-* A0A2U1M9L4_ARTAN) Solyc07g032786.1 994 1150 1206 1790 1852 2053 2001 1514 1032 1375 866 1173 1115 804 745 Thioredoxin (AHRD V3.3 *** A0A2U1M0J7_ARTAN) AT4G26160 Solyc07g150128.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V3.3 --* AT3G23470.3) Solyc07g032788.1 1 6 1 3 1 3 0 4 1 4 0 0 3 17 1 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic (AHRD V3.3 *-* A0A2G3D4W0_CAPCH) Solyc07g032789.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g150129.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeodomain GLABROUS 8 (AHRD V3.3 --* AT3G03260.1) Solyc07g037910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc07g037920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc07g037930.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g037950.1 112 173 182 224 245 261 219 262 249 284 147 263 228 184 199 ectonucleotide pyrophosphatase/phosphodiesterase family member 3 (AHRD V3.3 *** A0A2I4GPP6_9ROSI) AT4G29680 Solyc07g037960.1 571 619 559 566 664 453 483 646 689 735 548 685 603 595 559 ectonucleotide pyrophosphatase/phosphodiesterase family member 3 (AHRD V3.3 *** A0A2I4GPP6_9ROSI) AT4G29680 Solyc07g038100.3 256 257 162 224 202 293 330 264 222 171 213 241 176 227 154 acyl-CoA synthetase family protein (AHRD V3.3 *** AT3G60310.2) AT3G60310 Solyc07g038110.3 23 14 72 25 2 9 14 8 12 12 29 24 1 9 37 Beta-galactosidase (AHRD V3.3 *-* A0A1Q3CBS7_CEPFO) Solyc07g038120.1 85 21 179 65 26 40 34 28 35 63 62 49 22 36 72 Beta-galactosidase (AHRD V3.3 *** A0A2G3BNT0_CAPCH) Solyc07g038130.3 0 0 0 1 7 2 4 0 2 3 1 4 0 3 0 Beta-galactosidase (AHRD V3.3 *-* O81100_SOLLC) Solyc07g038160.4 129 37 87 92 53 40 36 54 45 39 78 70 25 57 79 GATA transcription factor 16 (AHRD V3.3 *** A0A2G3BNT7_CAPCH) AT5G56860 Solyc07g038170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g038190.3 37 94 218 116 121 123 171 142 71 72 50 86 109 129 62 WAS/WASL-interacting family protein (AHRD V3.3 -** AT1G55160.2) Solyc07g039190.4 360 293 420 502 444 515 532 376 462 279 494 341 313 463 712 hypothetical protein (AHRD V3.3 *-* AT5G56850.4) AT5G56850 Solyc07g039200.4 2833 2388 1374 1195 1222 1033 999 1254 1374 1374 1005 1314 2777 2245 1497 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1NGX5_ARTAN) AT2G19540 Solyc07g039210.4 929 713 800 694 630 648 618 570 719 679 822 718 845 761 879 PCI domain-containing protein (AHRD V3.3 *** A0A1Q3BJZ6_CEPFO) AT2G19560 Solyc07g039220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNAJ heat shock N-terminal domain-containing protein (AHRD V3.3 *** Q3E9D9_ARATH) Solyc07g039250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 asparagine-rich protein-like (AHRD V3.3 *-* XP_020397117.1) Solyc07g039260.2 18 0 0 0 0 0 0 0 6 7 18 24 10 32 20 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* K4BBV6_SOLLC) Solyc07g039310.1 125 527 149 242 373 397 324 353 230 210 127 206 327 184 140 lysine-specific histone demethylase 1 homolog 1 (AHRD V3.3 *** A0A2I4HTG5_9ROSI) AT4G29720 Solyc07g039320.2 914 762 551 403 536 576 459 833 593 752 349 756 581 627 290 WD-40 repeat-containing protein MSI4 (AHRD V3.3 *-* A0A2G2Z1C5_CAPAN) Solyc07g039330.4 2169 1572 1402 1179 1311 1331 1312 1410 1300 1362 761 1395 1351 1455 1176 Unknown protein Solyc07g039340.4 2298 2026 1642 2199 1482 1315 1508 1743 2188 2712 1616 2248 1380 1873 1641 Receptor-like serine/threonine-protein kinase ALE2 (AHRD V3.3 *** A0A2G3BYY1_CAPCH) AT5G56890 Solyc07g039343.1 79 35 42 42 36 29 50 29 25 24 42 31 23 56 28 Gag/pol polyprotein (AHRD V3.3 *-* A0A2K3NP54_TRIPR) Solyc07g039347.1 45 60 46 63 57 85 55 45 38 55 51 53 43 29 53 Unknown protein Solyc07g039380.3 1111 2346 1239 2287 1885 1577 1439 1845 1257 3048 1915 2398 1680 1294 1645 bromodomain protein (DUF761) (AHRD V3.3 *-* AT2G26110.1) Solyc07g039390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein RPP13 (AHRD V3.3 *** A0A2G2X9C3_CAPBA) Solyc07g039400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (CC-NBS-LRR) (AHRD V3.3 *-* E1UHL4_MUSBA) Solyc07g039410.3 4 17 23 6 19 11 14 11 40 13 27 18 25 21 21 Disease resistance protein RPP13 (AHRD V3.3 *** A0A2G2X9C3_CAPBA) Solyc07g039420.1 14 27 4 9 16 10 12 20 43 21 20 10 22 9 13 Disease resistance protein (AHRD V3.3 *-* A0A200PUC6_9MAGN) AT1G52660 Solyc07g039440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200PUC6_9MAGN) Solyc07g039450.3 939 1075 953 706 958 867 818 999 891 719 762 820 1329 976 917 Translation machinery-associated protein 22 (AHRD V3.3 *** A0A1U8DZC1_CAPAN) AT5G11900 Solyc07g039455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VVU6_9ASPA) ATMG00810 Solyc07g039470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g039480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g039500.4 304 373 293 323 340 327 311 338 376 297 236 306 318 341 326 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A2I0X2B6_9ASPA) AT4G29750 Solyc07g039510.4 317 518 783 706 797 800 939 561 653 511 745 584 551 637 759 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9SN82_ARATH) AT1G29840 Solyc07g039520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* F4I353_ARATH) Solyc07g039530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A1I9LML0_ARATH) Solyc07g039540.1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 3 Lipid phosphate phosphatase (AHRD V3.3 *-* A0A2R6QQN6_ACTCH) Solyc07g039550.4 430 698 617 540 664 720 652 659 743 504 512 522 723 730 437 RNA helicase DEAH-box21 AT3G26560 Solyc07g039570.3 5 2 0 0 10 17 1 8 0 0 10 0 0 2 14 bHLH transcription factor 051 AT5G56960 Solyc07g039580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g039610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 V-type proton ATPase subunit c''2 (AHRD V3.3 *-* B4FZS8_MAIZE) Solyc07g039615.1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3HFP9_9ROSI) Solyc07g039650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g039660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBK9_TRIPR) Solyc07g040660.4 77 59 50 46 27 53 30 73 66 89 20 67 47 55 52 Unknown protein Solyc07g040661.1 95 86 67 107 85 62 92 66 58 63 62 60 47 97 124 ARM repeat superfamily protein (AHRD V3.3 *-* AT3G06530.2) Solyc07g040663.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g150130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g040680.3 2314 374 76 297 205 160 162 154 425 925 228 388 161 261 439 Heat shock transcription factor (AHRD V3.3 *-* A0A1Y1I763_KLENI) Solyc07g040690.3 764 643 550 633 527 625 550 541 545 664 631 464 843 655 622 non-inducible immunity 1 AT1G64280 Solyc07g040700.3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 1 stomatal closure-related actin-binding protein 2 (AHRD V3.3 --* XP_002308873.3) Solyc07g040710.3 56 33 16 7 1 0 1 0 13 9 162 8 8 155 43 Calmodulin-binding protein (AHRD V3.3 *** A0A2U1QIJ0_ARTAN) AT2G26190 Solyc07g040720.3 2029 1986 2142 1694 1606 1707 1608 1786 1455 2104 1770 1625 2098 1864 1540 Casein kinase (AHRD V3.3 *** A2I5G0_BETVU) Solyc07g040730.1 852 858 1033 809 678 750 772 661 888 650 1178 680 1008 732 1089 DUF3511 domain-containing protein (AHRD V3.3 *** A0A1Q3CMD7_CEPFO) AT2G19460 Solyc07g040740.3 140 201 257 383 295 346 342 258 301 230 272 326 250 283 276 O-acyltransferase (AHRD V3.3 *** A0A2G2Z173_CAPAN) AT2G19450 Solyc07g040750.2 67 63 59 49 10 9 29 8 28 35 21 13 87 59 137 RNA helicase DEAD21 Solyc07g040770.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g040780.4 168 225 330 299 300 294 274 238 199 183 273 255 294 307 255 THO complex subunit 6 (AHRD V3.3 *-* A0A1J3CKF0_NOCCA) Solyc07g150131.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A2G2WAS9_CAPBA) Solyc07g040810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g040850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 V-type proton ATPase subunit c''2 (AHRD V3.3 *-* A0A1J3FGV2_NOCCA) Solyc07g040855.1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 Unknown protein Solyc07g040860.1 2 2 5 3 2 1 5 0 2 1 4 2 1 6 0 Unknown protein Solyc07g040880.4 4 3 1 0 0 0 0 0 0 5 3 5 6 9 0 Alpha/beta hydrolase fold-3 (AHRD V3.3 *** A0A200PPP0_9MAGN) Solyc07g040890.1 119 151 29 28 20 16 12 10 17 44 10 13 214 94 53 Alpha/beta-hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LX98_ARTAN) AT5G62180 Solyc07g040900.3 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta hydrolase fold-3 (AHRD V3.3 *-* A0A200PPT1_9MAGN) Solyc07g040905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g040910.3 701 597 751 677 617 594 664 409 396 427 672 461 817 711 892 Homeodomain-like/winged-helix DNA-binding family protein (AHRD V3.3 *-* A0A178WID5_ARATH) Solyc07g040920.2 1100 922 491 521 547 523 487 801 825 636 519 730 868 724 552 telomere repeat-binding factor 4-like (AHRD V3.3 *** A0A2I4GQM6_9ROSI) Solyc07g040930.1 48 2 15 16 1 5 2 2 16 14 30 7 5 13 21 Unknown protein Solyc07g040940.3 1452 794 864 771 724 676 751 487 743 742 879 650 746 947 1158 Protein kinase domain (AHRD V3.3 *** A0A200Q1Z0_9MAGN) AT5G57035 Solyc07g040950.3 469 447 377 390 463 491 466 472 430 489 368 438 346 273 456 Lactoylglutathione lyase / glyoxalase I family protein (AHRD V3.3 *** A0A1Y1IMJ5_KLENI) AT5G57040 Solyc07g040960.1 5334 3023 3187 705 16 9 13 6 73 289 9125 2728 1035 878 3568 Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A200QD47_9MAGN) AT5G12010 Solyc07g040965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g040980.3 1325 1019 926 1001 840 939 970 976 1189 1132 1097 923 1027 1099 1070 Plant/F27B13-30 protein (AHRD V3.3 *** A0A072V820_MEDTR) AT4G29790 Solyc07g040990.4 1734 708 1132 1037 778 842 848 725 1009 918 1441 985 750 1303 3981 Protein phosphatase 2C 77 (AHRD V3.3 *** A0A2G3BYZ4_CAPCH) Solyc07g041000.4 74 49 39 45 4 16 13 12 52 67 100 55 74 50 208 Cleavage and polyadenylation specificity factor subunit 5-like protein (AHRD V3.3 *** A0A2K3PRX7_TRIPR) AT4G29820 Solyc07g041010.3 249 128 150 138 93 108 91 97 103 190 131 95 229 130 211 60S ribosomal protein L18a-like protein (AHRD V3.3 *** A0A1J3E1C5_NOCCA) AT4G26060 Solyc07g041020.3 564 772 533 433 540 451 479 445 418 338 468 449 867 685 722 Zinc ion binding protein (AHRD V3.3 *** A0A2U1P7G2_ARTAN) AT2G19385 Solyc07g150132.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g041027.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3J4H1_9ROSI) Solyc07g041030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g041035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g041070.3 302 501 618 706 941 760 900 892 517 703 929 668 576 548 565 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* F4KAI4_ARATH) AT5G57070 Solyc07g041080.3 364 503 478 488 524 514 647 529 531 377 414 431 672 553 536 WD40 repeat (AHRD V3.3 *** A0A200Q1Z4_9MAGN) AT4G29830 Solyc07g041090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase superfamily (AHRD V3.3 *-* A0A200Q008_9MAGN) Solyc07g041100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g041150.4 2900 2695 2443 2444 2914 2950 3047 3172 3104 2478 2407 2295 2482 2439 2328 Myosin-12 (AHRD V3.3 *** A0A2G2Z1K3_CAPAN) AT5G20490 Solyc07g041160.3 435 469 651 485 511 570 465 521 522 490 548 375 529 497 513 membrane protein (AHRD V3.3 *** AT5G35460.2) AT5G35460 Solyc07g041170.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Endo-1,4-beta-xylanase (AHRD V3.3 *-* A0A1J3CP06_NOCCA) Solyc07g041180.4 112 156 174 160 242 261 252 262 189 93 127 152 99 170 203 protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 (AHRD V3.3 *** A0A2I4GL70_9ROSI) AT5G20610 Solyc07g041190.3 1109 576 731 535 547 557 543 448 558 794 647 615 280 489 693 PHD finger protein ALFIN-LIKE 5 (AHRD V3.3 *** A0A2G3CGJ3_CAPCH) Solyc07g041200.3 507 621 625 642 728 848 841 667 532 476 558 617 605 679 540 Alpha/beta superfamily hydrolase (AHRD V3.3 *** U9TV27_RHIID) AT5G20520 Solyc07g041210.3 323 234 278 286 218 289 296 202 186 196 264 212 215 225 273 Phospholipid:diacylglycerol acyltransferase (AHRD V3.3 *** A0A2U1KQW5_ARTAN) AT5G13640 Solyc07g041215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3MA39_TRIPR) Solyc07g041230.3 82 143 160 197 141 161 133 130 190 75 225 97 137 203 466 Protein Brevis radix-like 1 (AHRD V3.3 *** A0A1U8HG14_CAPAN) AT5G20540 Solyc07g041235.1 51 66 42 79 111 76 63 75 38 35 34 26 36 31 67 Unknown protein Solyc07g041250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g041260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine decarboxylase (AHRD V3.3 *-* A0A2G2W5V8_CAPBA) Solyc07g041270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g041280.4 195 289 222 332 264 326 385 280 376 341 316 340 233 249 198 Carbon-nitrogen hydrolase (AHRD V3.3 *** A0A200QEN6_9MAGN) Solyc07g041290.3 110 239 284 183 286 266 185 201 303 176 241 277 427 287 220 protein BIG GRAIN 1-like A (AHRD V3.3 *** A0A2I4GJS3_9ROSI) Solyc07g041300.2 1 1 0 0 1 6 1 8 4 0 0 2 0 0 0 Spermidine synthase (AHRD V3.3 *** F8WLB6_CITUN),Pfam:PF01564 Solyc07g041310.3 2893 4412 3832 3132 4247 3647 3666 3985 2687 2496 3072 2879 4836 4035 3233 40S ribosomal protein S3, putative, expressed (AHRD V3.3 *** Q75G91_ORYSJ) AT5G35530 Solyc07g041320.3 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 Paired amphipathic helix Sin3-like protein (AHRD V3.3 *-* A0A178WJA6_ARATH) Solyc07g041330.3 468 350 430 410 287 338 375 293 333 316 267 299 295 348 303 maternal effect embryo arrest 22 (AHRD V3.3 *** AT2G34780.4) AT2G34780 Solyc07g041340.2 737 323 351 387 691 802 807 495 362 375 609 400 647 411 562 protein ELF4-LIKE 4-like (AHRD V3.3 *** A0A2I4GKV3_9ROSI) AT2G06255 Solyc07g041350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase TOR (AHRD V3.3 *-* A0A2G2VC45_CAPBA) Solyc07g041360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kinesin-4 (AHRD V3.3 *-* A0A2G3CDB4_CAPCH) Solyc07g041365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g041430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 family domain/helicase domain protein (AHRD V3.3 *-* J2ELW1_PSEFL) Solyc07g041440.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *-* A0A200QH53_9MAGN) Solyc07g041460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* AT1G02670.6) Solyc07g041465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4N4_TRIPR) Solyc07g041470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *-* A0A200QH53_9MAGN) Solyc07g041490.3 1011 1768 1832 1957 1915 1651 1610 2399 1915 1787 1531 2292 1775 1733 1377 Stress responsive A/B barrel domain protein (AHRD V3.3 *** A0A2K3L464_TRIPR) AT2G31670 Solyc07g041500.3 10 6 10 5 9 1 8 0 10 8 2 5 3 3 0 Cytochrome P450 (AHRD V3.3 *** A0A200QD39_9MAGN) Solyc07g041510.3 872 754 475 469 653 496 523 815 857 905 341 781 439 653 443 RNA polymerase-associated protein CTR9-like protein (AHRD V3.3 *** A0A1J3H2G1_NOCCA) AT2G06210 Solyc07g041550.2 1899 1323 1414 1159 1037 1248 1276 1221 1319 1036 1531 1176 1071 1365 1461 RNA polymerase-associated protein CTR9 (AHRD V3.3 *** A0A2K3NP21_TRIPR) Solyc07g041555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g041640.3 1779 3048 2095 2970 5090 4560 4957 6124 3244 1618 2760 3587 1923 2620 908 Growth-regulating factor 5 (AHRD V3.3 *** A0A2G3BVB3_CAPCH) AT3G13960 Solyc07g041650.3 0 0 1 0 9 5 9 0 0 1 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1KXQ2_ARTAN) Solyc07g041660.4 1676 1045 868 882 908 845 943 936 1017 1095 972 770 1038 1101 897 DENN domain-containing protein (AHRD V3.3 *** A0A1Q3BXR1_CEPFO) AT5G35560 Solyc07g041665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc07g041680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc07g041683.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc07g041687.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3KFP4_TRIPR) Solyc07g041720.1 314 2854 2945 2814 243 233 203 245 3150 1325 1078 1182 1264 2086 1910 Germin-like protein (AHRD V3.3 *** S8E4K0_9LAMI) Solyc07g041730.4 55 59 167 71 47 54 77 55 122 63 231 70 77 41 91 MOB kinase activator family (AHRD V3.3 *** A0A2U1N847_ARTAN) Solyc07g041740.1 0 0 0 0 0 4 0 1 0 0 0 0 0 0 4 Ribonuclease H protein (AHRD V3.3 *-* A0A2I0XA97_9ASPA) Solyc07g041750.3 570 602 703 735 502 539 626 633 613 758 612 426 419 606 704 O-fucosyltransferase family protein (AHRD V3.3 *** A0A2U1LL12_ARTAN) AT5G35570 Solyc07g041755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) Solyc07g041760.3 300 415 456 308 343 353 351 342 215 305 272 348 475 350 192 Unknown protein Solyc07g041770.1 21 106 84 248 316 318 238 295 101 93 84 188 32 93 118 Putative membrane lipoprotein (AHRD V3.3 *** AT3G42725.1) AT3G42725 Solyc07g041780.3 65 58 52 77 58 71 61 51 82 69 62 67 65 68 63 OBP3-responsive protein 4 (ORG4) (AHRD V3.3 *** Q8VY85_ARATH) AT2G06010 Solyc07g041790.1 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 Splicing factor 3B subunit 1 (AHRD V3.3 *-* A0A1U8EIB4_CAPAN) Solyc07g041820.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) Solyc07g041830.4 3915 1327 1268 1583 1542 1462 1476 1269 1230 2659 1799 1763 913 1284 1982 MTD1 (AHRD V3.3 *-* Q9LLM3_MEDTR) AT5G21940 Solyc07g041835.1 35 6 15 18 12 31 21 12 14 45 22 34 15 8 18 Unknown protein Solyc07g041840.2 2 6 0 3 8 6 9 11 7 5 3 2 4 4 0 Unknown protein Solyc07g041850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HDG2 (AHRD V3.3 *** A0A1J3DUE0_NOCCA) Solyc07g041860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g041870.3 2613 2951 2801 2339 2277 2304 2529 2175 1812 1715 1930 2211 3258 3156 2544 Tubulin--tyrosine ligase-like protein 12 (AHRD V3.3 *** A0A1J3IML6_NOCCA) AT1G77550 Solyc07g041880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TMEM192 family protein (AHRD V3.3 --* AT5G20580.2) Solyc07g041890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FRIGIDA interacting protein 1 (AHRD V3.3 *-* A0A2U1P016_ARTAN) Solyc07g150133.1 6 14 0 1 0 7 3 0 6 8 21 8 2 0 0 serine/threonine-protein kinase ATM (AHRD V3.3 *-* A0A1S3XAP8_TOBAC) Solyc07g041900.3 3071 679 2131 1480 96 111 130 102 1372 1182 2267 1221 1115 2906 5463 cysteine proteinase AT3G45310 Solyc07g041920.4 0 0 0 0 0 1 0 3 1 0 106 7 0 0 0 Cysteine protease (AHRD V3.3 *** Q9LRI2_TOBAC) AT3G45310 Solyc07g041925.1 8 1 0 9 11 12 7 11 9 7 4 6 11 3 5 Unknown protein Solyc07g041930.3 719 923 963 853 829 915 852 680 644 537 738 747 1009 1111 991 Adenylyl cyclase (AHRD V3.3 *** Q9LVG0_ARATH) AT3G21465 Solyc07g041940.3 3 1 0 0 0 2 0 0 6 0 0 0 0 5 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1QC97_ARTAN) AT2G05940 Solyc07g041960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine decarboxylase (AHRD V3.3 *-* A0A2G3AU85_CAPCH) Solyc07g041970.4 1888 4544 4222 4384 7370 6753 6090 7809 5394 4104 3618 6132 2902 3758 3936 Subtilisin-like protease (AHRD V3.3 *** A0A1J3J113_NOCCA) AT2G05920 Solyc07g041980.3 441 696 635 709 1122 1322 1533 1170 688 581 748 749 479 504 387 Guanine nucleotide-binding protein subunit gamma 3 (AHRD V3.3 *-* A0A2G3BYH7_CAPCH) AT5G20635 Solyc07g042000.4 424 253 245 326 198 287 211 162 233 325 244 236 221 325 342 Cation/calcium exchanger 3 (AHRD V3.3 *** A0A1U8H9M5_CAPAN) Solyc07g042010.4 278 287 252 300 233 319 323 333 248 221 293 262 322 386 246 RNA helicase DEAH-box22 AT4G35740 Solyc07g042020.3 183 272 296 260 306 350 335 309 325 224 357 215 302 392 280 Protein trichome birefringence-like 16 (AHRD V3.3 *** A0A1U8H965_CAPAN) AT5G20680 Solyc07g042025.1 187 163 166 269 160 239 246 193 153 149 287 182 201 207 321 Unknown protein Solyc07g042030.2 138 171 96 107 133 124 134 191 166 125 86 132 138 138 137 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2U1MA82_ARTAN) AT1G71210 Solyc07g042080.4 632 455 533 681 520 471 478 481 609 626 653 671 534 619 720 Inter-alpha-trypsin inhibitor heavy chain-like protein (AHRD V3.3 *** Q8L798_ARATH) AT1G19110 Solyc07g042090.4 10 6 12 15 2 3 2 5 1 8 0 9 6 12 14 Protein LAZ1-like protein 2 (AHRD V3.3 *** A0A2G3BYI1_CAPCH) AT1G23070 Solyc07g042100.3 0 0 0 4 0 0 1 1 1 0 0 0 0 0 12 hypothetical protein (AHRD V3.3 *** AT1G72490.2) Solyc07g042105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3D5A9_NOCCA) Solyc07g042130.4 126 158 107 166 203 210 165 175 161 88 148 115 147 182 122 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QMK2_9MAGN) AT5G50390 Solyc07g042150.3 607 681 498 487 711 644 611 738 677 613 554 711 681 606 695 Ubiquinone biosynthesis COQ9-like protein (AHRD V3.3 *** F4IE14_ARATH) AT1G19140 Solyc07g042160.3 437 479 565 593 488 520 488 480 491 534 744 611 546 634 529 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LH94_ARTAN) AT1G19170 Solyc07g042170.3 866 2375 5728 1233 1413 1387 1343 1340 3124 4302 8569 2772 2481 1946 2225 Jasmonate ZIM-domain protein 3 (AHRD V3.3 *** B3Y563_TOBAC) AT1G19180 Solyc07g042180.4 3706 2739 2998 3125 2777 2939 2886 2535 2551 2732 3308 2851 2762 2776 3646 oligouridylate-binding protein 1-like (AHRD V3.3 *** A0A2I4E5R0_9ROSI) Solyc07g042190.3 1276 910 864 1795 1759 1248 1233 1202 1157 1077 1134 1050 1901 1748 3176 DUF581 domain-containing protein (AHRD V3.3 *** A0A1Q3C7K1_CEPFO) AT1G74940 Solyc07g042200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g042220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-galactosidase (AHRD V3.3 *** A0A2G3AC89_CAPAN) AT5G20710 Solyc07g042230.1 6 1 20 1 0 0 0 0 3 4 13 6 0 15 73 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2WJA8_CAPBA) Solyc07g042235.1 0 1 0 0 0 0 1 0 0 0 0 0 0 2 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc07g042250.3 1726 3637 3332 2925 3086 3191 3393 3256 2874 2188 2395 3224 4355 3861 2756 chaperonin 21 precursor AT5G20720 Solyc07g042260.4 1087 1579 1059 1248 1140 1131 1463 1425 1461 1170 1274 1158 1033 1109 959 Auxin Response Factor 7 AT5G20730 Solyc07g042270.4 1044 1179 931 790 763 797 827 673 739 700 712 701 1066 1064 1106 RNA helicase DEAD22 AT2G40700 Solyc07g042280.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Keto acyl-acyl carrier protein synthase II (AHRD V3.3 *-* A0A2U1KPF3_ARTAN) Solyc07g042290.3 0 0 7 0 0 1 3 0 0 3 3 1 5 3 10 Protein OBERON (AHRD V3.3 *-* A0A200Q0D6_9MAGN) Solyc07g042295.1 1 0 7 3 0 0 1 0 2 4 2 1 0 2 0 Unknown protein Solyc07g042300.1 276 842 819 706 1125 1037 892 1233 802 496 679 656 965 600 336 Dirigent protein (AHRD V3.3 *** K4CE93_SOLLC) AT1G65870 Solyc07g042310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 7 (AHRD V3.3 *-* A0A060D4V8_9GENT) Solyc07g042315.1 378 741 544 649 915 751 804 1154 969 616 394 895 684 798 520 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** A0A0D3GTI7_9ORYZ) AT1G74960 Solyc07g042330.2 139 131 142 206 132 135 170 82 85 77 127 110 64 128 154 30S ribosomal protein S9 (AHRD V3.3 *-* A0A2G3CAH5_CAPCH) Solyc07g042335.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxisome biogenesis protein 2 (AHRD V3.3 *-* A0A2G2X6N8_CAPBA) Solyc07g042317.1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc07g042380.4 1561 1713 992 1005 1019 1021 995 1237 1148 933 912 1004 1500 1499 1353 RRP12-like protein (AHRD V3.3 *** A0A2I4DID3_9ROSI) AT2G34357 Solyc07g042390.3 726 1577 993 1630 2568 2095 2508 2536 2691 1657 1494 2674 826 1443 1351 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A061GSW0_THECC) AT5G20740 Solyc07g042400.2 1 26 12 15 10 12 13 13 18 16 42 25 18 31 21 Unknown protein Solyc07g042410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g042420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g042430.1 13 14 6 1 6 13 5 8 7 5 4 0 7 8 3 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G2WBJ3_CAPBA) AT1G19250 Solyc07g042440.3 272 888 1030 1424 1497 1361 1454 1429 926 875 806 1216 505 867 730 Peroxiredoxin Q (AHRD V3.3 *** D7TCA6_VITVI) AT3G26060 Solyc07g042450.3 197 230 286 265 183 260 229 165 130 167 260 196 272 232 224 transmembrane protein (AHRD V3.3 *** AT1G19240.1) AT1G19240 Solyc07g042460.2 3 3 11 7 0 7 3 3 3 6 4 2 3 10 9 Respiratory burst oxidase-like protein A (AHRD V3.3 *** A0A2G2WBJ4_CAPBA) AT1G19230 Solyc07g042465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc07g042470.3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Small auxin up-regulated RNA64 AT3G43120 Solyc07g042480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g042490.1 72 129 339 218 28 47 40 35 101 97 371 82 235 139 240 Auxin responsive SAUR protein (AHRD V3.3 *** A0A2U1PXP1_ARTAN) AT5G20820 Solyc07g042493.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g042497.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc07g042500.4 715 458 414 466 222 307 317 247 375 319 284 284 313 506 502 alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT2G03140.9) AT2G03140 Solyc07g042510.3 9 3 10 3 2 0 0 0 3 2 1 4 0 1 0 Bax inhibitor 1-related (AHRD V3.3 *** A0A200RBK8_9MAGN) AT4G15470 Solyc07g042515.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc07g042520.4 0 4 6 26 3 3 8 8 1 9 7 2 0 3 1558 Sucrose synthase (AHRD V3.3 *** K4CEB3_SOLLC) Solyc07g042550.3 4414 2012 2213 2151 876 689 844 752 2266 2198 3065 1219 3128 3513 5224 sucrose synthase AT3G43190 Solyc07g042553.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc07g042557.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc07g042560.4 80 307 411 451 773 818 815 935 384 205 302 452 50 251 178 Kinesin-like protein NACK1 (AHRD V3.3 *** A0A2G2WBW6_CAPBA) AT3G43210 Solyc07g042570.3 1428 2348 1914 1430 2193 1718 1768 2103 1533 1293 1381 1694 2637 2118 1651 Eukaryotic translation initiation factor 3 subunit K (AHRD V3.3 *** A0A1U8FDB9_CAPAN) AT4G33250 Solyc07g042580.3 262 1199 1170 1429 2774 3148 3057 2883 1252 701 1295 1867 388 1033 737 microtubule-associated protein TORTIFOLIA1 (AHRD V3.3 *** A0A2I4EH42_9ROSI) AT2G07170 Solyc07g042590.4 477 524 893 595 708 810 843 720 626 590 885 645 713 537 503 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1P9U5_ARTAN) AT2G07180 Solyc07g150134.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc07g042597.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g042600.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4GWM4_9ROSI) Solyc07g042610.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FDV7_9ROSI) Solyc07g042620.4 392 673 771 644 759 808 773 743 574 391 623 577 909 706 738 PREFOLDIN 1 (AHRD V3.3 *** F4IL65_ARATH) AT2G07340 Solyc07g042630.4 805 687 346 945 353 407 341 261 554 285 436 131 615 268 1655 Terpene cyclase/mutase family member (AHRD V3.3 *** A0A1U8HG00_CAPAN) Solyc07g042635.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g042660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *-* A0A200QH53_9MAGN) Solyc07g042670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 agamous-like MADS-box protein AGL29 (AHRD V3.3 *** XP_004247303.1) Solyc07g042680.3 6351 3353 2480 2408 2050 1903 1914 2243 2831 3626 2917 2748 3297 2671 3050 MAP kinase kinase kinase 46 AT2G24360 Solyc07g042690.4 95 137 141 229 176 192 229 276 216 232 216 248 125 170 94 Organic cation/carnitine transporter 7 (AHRD V3.3 *** A0A2G2ZBT3_CAPAN) AT3G13050 Solyc07g042700.4 521 789 830 715 786 776 773 699 751 583 689 633 873 833 591 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* AT5G58130.1) AT5G58130 Solyc07g042710.3 549 527 720 566 636 576 615 519 525 476 653 466 739 595 824 cytoplasmic dynein 2 light intermediate chain (AHRD V3.3 *** AT2G04340.1) AT2G04340 Solyc07g042720.1 0 0 0 1 1 0 1 0 0 0 0 0 3 2 6 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q8C6_9MAGN) Solyc07g042740.3 581 555 663 577 488 708 637 546 547 384 596 456 670 678 705 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* Q9FGT1_ARATH) Solyc07g042750.4 553 472 670 589 466 432 557 435 427 419 490 410 596 577 618 Pseudouridine synthase (AHRD V3.3 *** A0A200R992_9MAGN) AT1G78910 Solyc07g042760.1 40 75 80 81 65 73 44 50 92 61 57 55 120 112 111 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R9C5_9MAGN) AT4G31070 Solyc07g042770.1 3 0 0 0 0 0 4 3 0 2 0 2 0 0 1 26S protease regulatory subunit 6B-like protein (AHRD V3.3 *-* A0A2G2WNW8_CAPBA) Solyc07g042800.2 56 40 37 42 53 58 44 62 60 40 17 71 30 57 42 Chloroplast envelope membrane protein, CemA (AHRD V3.3 *** A0A2U1QBI8_ARTAN) AT4G31040 Solyc07g042810.3 6 1 8 2 5 5 5 5 2 3 4 6 6 5 0 Chloroplast envelope membrane protein, CemA (AHRD V3.3 *-* A0A2U1QBI8_ARTAN) Solyc07g042820.3 82 70 134 100 95 130 126 65 80 57 132 85 70 132 93 Chloroplast envelope membrane protein (AHRD V3.3 *-* A0A200R9H0_9MAGN) ATCG00530 Solyc07g042830.4 478 322 202 295 175 169 214 93 242 210 241 180 188 327 445 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** B2ZGM9_SOLLC) Solyc07g042840.1 1 0 1 1 0 3 3 0 0 0 0 2 2 3 0 Ribosomal protein L14 (AHRD V3.3 *** A0A200PVX1_9MAGN) Solyc07g042850.2 340 268 228 273 178 290 279 158 155 168 199 221 218 203 220 Unknown protein Solyc07g042880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200R9G0_9MAGN) AT5G36110 Solyc07g042890.3 3577 2532 2314 1925 1869 1834 1791 1925 2294 2789 2098 1911 2567 2336 2398 MAP kinase kinase kinase 47 AT2G24360 Solyc07g042900.4 374 304 371 508 431 414 476 403 410 393 471 330 360 414 394 Organic cation/carnitine transporter 7 (AHRD V3.3 *** A0A2G2WLG5_CAPBA) AT3G13050 Solyc07g042910.4 940 1075 1014 824 948 996 974 998 1014 1016 732 982 1071 1060 1040 transmembrane protein (AHRD V3.3 *** AT5G58100.2) AT5G58100 Solyc07g042913.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 *-* A0A1U8FCS0_CAPAN) Solyc07g042915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 *-* A0A1U8FCS0_CAPAN) Solyc07g042917.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 *-* A0A1U8FCS0_CAPAN) Solyc07g042930.3 185 243 251 228 297 223 265 256 246 282 169 335 244 186 189 Rhomboid-like protein 14 (AHRD V3.3 *** A0A2K3N0Y0_TRIPR) AT3G17611 Solyc07g042940.1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g042950.1 91 81 64 116 62 90 118 91 103 80 89 81 67 115 93 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1U8HGU2_CAPAN) Solyc07g042970.4 242 258 180 285 327 302 248 286 183 353 125 250 217 251 182 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A1P8BAY4_ARATH) Solyc07g042990.1 60 310 202 294 448 353 396 491 274 233 236 312 124 167 176 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A0K9P1I9_ZOSMR) AT3G17640 Solyc07g042995.1 1775 8528 4564 42307 20300 13515 27699 28390 5963 17550 5975 14005 7207 9385 2703 Unknown protein Solyc07g043010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g043020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4FGA1_9ROSI) Solyc07g043025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4FGH6_9ROSI) Solyc07g043040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2R4LMG7_BARVU) Solyc07g043050.1 346 304 284 351 259 276 237 337 439 456 343 390 279 293 340 Glycosyltransferase (AHRD V3.3 *** A0A2I4FGA1_9ROSI) AT2G29730 Solyc07g043060.1 2 2 0 0 0 0 0 0 0 1 2 0 9 4 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4FGA1_9ROSI) AT2G29730 Solyc07g043070.3 14 190 211 258 627 612 508 486 204 79 140 290 28 99 122 hypothetical protein (AHRD V3.3 *-* AT4G15140.1) AT4G15140 Solyc07g043100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** Q94IF2_TOBAC) Solyc07g043110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** Q94IF2_TOBAC) Solyc07g043120.1 31 64 40 157 123 88 101 126 144 101 107 161 55 80 133 Glycosyltransferase (AHRD V3.3 *** A0A288W8G4_GARJA) Solyc07g043130.3 2454 1982 103 953 1656 1219 1200 1538 1144 1243 101 299 985 110 155 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1NE60_ARTAN) AT2G30520 Solyc07g150135.1 2 4 3 4 3 2 2 3 1 8 0 0 2 3 1 RNA pseudouridine synthase 7 (AHRD V3.3 *-* A0A2G2X2A6_CAPBA) Solyc07g150136.1 3 4 0 2 7 2 7 0 2 1 0 4 2 4 1 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc07g043150.1 239 226 76 84 12 1 20 27 56 91 49 38 520 183 137 Glycosyltransferase (AHRD V3.3 *** Q94IF2_TOBAC) AT3G21750 Solyc07g043160.1 556 536 515 473 610 593 425 551 604 669 602 565 394 509 760 Glycosyltransferase (AHRD V3.3 *** Q94IF2_TOBAC) AT3G21750 Solyc07g043170.4 45 41 20 104 27 36 30 33 38 152 93 28 141 53 111 Glycosyltransferase (AHRD V3.3 *** Q94IF2_TOBAC) AT3G21750 Solyc07g043180.1 4 0 8 1 6 0 7 0 2 5 0 3 1 3 20 Glycosyltransferase (AHRD V3.3 *-* Q94IF1_TOBAC) Solyc07g043200.2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 Zinc transporter protein (AHRD V3.3 *** A5BDR3_VITVI) AT1G05300 Solyc07g043205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine decarboxylase (AHRD V3.3 *-* A0A2G2W5V8_CAPBA) Solyc07g043230.3 519 431 735 733 45 75 56 71 347 571 714 189 785 497 831 Zinc transporter protein (AHRD V3.3 *** A5BDR3_VITVI) AT1G05300 Solyc07g043240.4 8 14 11 70 43 57 73 45 17 36 51 5 3 13 6 Pectinesterase (AHRD V3.3 *** A0A1U8ETT4_CAPAN) AT1G05310 Solyc07g043250.1 2108 993 679 568 36 52 41 26 218 1009 917 197 1058 1114 673 VQ motif-containing protein 22 (AHRD V3.3 *** A0A2G2Z0Y6_CAPAN) AT3G22160 Solyc07g043260.4 1470 1215 1124 1005 978 986 1014 1096 1183 1157 1036 1141 1033 1064 848 protein FAR1-RELATED SEQUENCE 2-like isoform X1 (AHRD V3.3 *** A0A2I4HFL5_9ROSI) Solyc07g043270.3 2750 2127 2429 2700 2138 2451 2850 2042 2273 1772 2242 1727 2025 2444 3124 Protein FAR-RED ELONGATED HYPOCOTYL 3 (AHRD V3.3 *** A0A2G2Z0V7_CAPAN) AT3G22170 Solyc07g043280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g043285.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g043310.3 1487 1010 762 1009 488 439 483 528 655 1149 733 634 2285 1114 1006 Gamma aminobutyrate transaminase isoform 1 AT3G22200 Solyc07g043320.3 1693 2101 1723 1689 1960 1703 1767 1668 2359 1431 1773 1207 2205 1762 1921 myosin heavy chain%2C embryonic smooth protein (AHRD V3.3 *-* AT1G05320.9) AT2G32240 Solyc07g043330.3 504 1079 676 1398 1959 1694 1741 1983 1233 1127 698 1115 1226 926 755 Transcription factor GRAS (AHRD V3.3 *** A0A200QPL1_9MAGN) AT5G41920 Solyc07g043340.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g043350.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g043360.1 6028 8462 9023 6093 8200 7776 6972 8288 6424 5845 7411 7430 9405 7982 7808 60S ribosomal protein L27 (AHRD V3.3 *** A0A2G3BZK6_CAPCH) AT4G15000 Solyc07g150137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3AMH7_CEPFO) Solyc07g043390.4 2133 20622 9336 17486 21833 21103 21738 19509 43386 32588 36802 60791 18216 26452 16438 Cellulose synthase (AHRD V3.3 *** A0A200Q4F9_9MAGN) Solyc07g043400.1 0 0 1 0 1 1 0 0 4 2 0 8 0 0 0 Unknown protein Solyc07g043410.1 0 0 28 2 1 8 2 2 74 28 167 182 1 26 2 Glycosyltransferase (AHRD V3.3 *** E5L3S0_SOLLC) Solyc07g043420.3 5794 48993 22578 38301 30167 28188 30557 29333 112055 77501 100039 153084 48411 66233 56410 2-oxoglutarate-dependent dioxygenase 2 Solyc07g043440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2G3BZR4_CAPCH) Solyc07g043450.3 0 0 0 1 0 0 0 0 1 2 0 1 1 1 0 Glycosyltransferase (AHRD V3.3 *** A0A2G3BZR4_CAPCH) Solyc07g043460.3 541 9977 2816 6487 8108 7611 7784 7077 16528 8491 9841 16731 7756 10220 4607 Cytochrome P450 (AHRD V3.3 *** A0A200PQ40_9MAGN) Solyc07g043470.3 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 Unknown protein Solyc07g043480.1 1087 10859 6125 9148 12403 13444 10584 11685 14427 11296 13894 18240 8345 10942 6351 Glycosyltransferase (AHRD V3.3 *** A0A2G3BZR4_CAPCH) Solyc07g043485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g043490.1 521 8172 2295 5590 8054 6817 6332 8966 13301 7575 5519 12735 6697 7840 2644 Glycosyltransferase (AHRD V3.3 *** P93789_SOLTU) Solyc07g043500.1 962 12249 1841 9103 6585 4880 4788 6475 17488 10975 5973 18338 12330 12953 5345 Glycosyltransferase (AHRD V3.3 *** C5NN15_CATRO) Solyc07g043510.3 440 332 781 460 304 333 294 249 338 363 528 302 476 542 451 Cysteine proteinases superfamily protein (AHRD V3.3 *** F4J076_ARATH) AT3G22260 Solyc07g043530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein PAT1 homolog 1-like (AHRD V3.3 *-* A0A2I4EXG6_9ROSI) Solyc07g043550.3 616 387 215 291 232 236 286 202 328 360 340 179 589 428 475 UDP-glucose 4-epimerase (AHRD V3.3 *** A0A1Y1ITM0_KLENI) Solyc07g043560.4 1091 1844 1331 1158 2028 1588 1748 2017 1647 1310 1424 1726 3080 2119 1780 Heat shock protein 70 kDa (AHRD V3.3 *** A0A2K3NQB8_TRIPR) AT4G16660 Solyc07g043570.3 232 379 375 541 579 548 599 504 757 486 642 486 338 426 854 NAD(P)-linked oxidoreductase superfamily protein (AHRD V3.3 *** A0A2U1Q7S8_ARTAN) AT1G06690 Solyc07g043580.4 1586 1021 921 1125 796 763 792 688 1113 1117 1105 623 942 921 974 bHLH transcription factor 052 AT3G59060 Solyc07g043590.3 1677 1185 676 1299 561 543 555 488 1156 2083 1268 1263 1558 1189 1965 Polyamine oxidase 3 (AHRD V3.3 *** A0A2G3BYY2_CAPCH) AT2G43020 Solyc07g043600.4 411 485 460 373 450 416 348 399 455 382 465 431 527 556 424 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WBV7_CAPBA) AT3G59040 Solyc07g043610.3 1312 1033 1229 1111 917 1141 1271 909 825 899 1120 923 800 1038 1022 Auxin response factor (AHRD V3.3 *-* A0A2G2WCT5_CAPBA) Solyc07g043620.3 1498 1282 1010 1243 1130 1265 1344 1186 1149 1220 799 1163 777 938 972 Auxin Response Factor 6B Solyc07g043630.2 1 0 0 0 0 4 0 2 3 0 0 1 2 0 9 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNF3_9MAGN) AT2G17650 Solyc07g043640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNF3_9MAGN) AT2G17650 Solyc07g043650.3 0 2 2 2 10 12 7 10 5 5 20 1 4 1 0 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNF3_9MAGN) Solyc07g043655.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc07g043660.3 5 4 3 0 7 5 5 13 8 4 5 2 1 5 0 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNF3_9MAGN) Solyc07g043665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc07g043670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1NYH9_ARTAN) Solyc07g043680.3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 (AHRD V3.3 *** A0A2G2XQ26_CAPBA) Solyc07g043685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3IMG1_NOCCA) Solyc07g043690.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 (AHRD V3.3 *** A0A2G3CEN5_CAPCH) Solyc07g043700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc07g043710.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc07g043713.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PDV1_TRIPR) Solyc07g043717.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 (AHRD V3.3 *** A0A2G3CEN5_CAPCH) Solyc07g044710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 (AHRD V3.3 *** A0A2G2XQ26_CAPBA) Solyc07g044720.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 (AHRD V3.3 *** A0A2G2XQ26_CAPBA) Solyc07g044725.1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3JUZ2_TRIPR) Solyc07g044730.4 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 (AHRD V3.3 *** A0A2G2XQ26_CAPBA) Solyc07g044750.3 143 107 185 169 142 199 166 141 120 162 104 155 128 107 76 ATPase (AHRD V3.3 *** A0A200Q5U6_9MAGN) Solyc07g044760.3 4448 4021 2689 2497 1686 1892 1612 1811 2641 2658 2123 2819 3377 3966 2881 RNA helicase DEAD23 AT3G22330 Solyc07g044780.3 604 612 922 789 742 870 854 611 593 452 934 576 561 733 697 Zinc finger protein (AHRD V3.3 *** A0A200QX00_9MAGN) Solyc07g044785.1 38 35 54 61 47 45 66 34 41 37 33 48 27 18 35 Pvr4 (AHRD V3.3 *-* A0A1D5AHY8_CAPAN) Solyc07g044800.2 8 3 23 16 12 11 33 12 24 7 4 14 10 3 28 Disease resistance protein (AHRD V3.3 *** A0A200QRC8_9MAGN) Solyc07g044810.3 1517 1180 958 972 820 797 826 761 757 1073 883 716 1226 1169 1064 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (AHRD V3.3 *** A0A1J3HP52_NOCCA) AT3G22290 Solyc07g044815.1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3EXQ7_NOCCA) Solyc07g044820.1 0 0 0 1 3 0 1 1 3 4 0 1 0 0 0 Hexosyltransferase (AHRD V3.3 *** A0A2G3AUB0_CAPCH) Solyc07g044830.3 337 423 425 403 369 336 459 340 360 386 398 262 576 511 394 Membrane-associated progesterone-binding protein 4 (AHRD V3.3 *** A0A2G2Z1W0_CAPAN) AT4G14965 Solyc07g044840.3 5347 7353 4640 5185 5510 4713 5294 5700 5209 4835 3961 5148 7065 6686 6437 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (AHRD V3.3 *** A0A2G2WBT5_CAPBA) AT3G08590 Solyc07g044850.3 920 753 971 989 1095 1122 1123 974 968 910 1188 872 943 828 1082 WD repeat-containing protein 26-like (AHRD V3.3 *** A0A2I4E4P1_9ROSI) AT5G08560 Solyc07g044860.3 4211 8927 6131 6438 13942 10695 10836 14671 11144 10297 6341 10391 5779 4711 6544 psbXphotosystem II 23 kDa protein AT1G06680 Solyc07g044870.4 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** Q9SFD2_ARATH) AT3G07820 Solyc07g044880.3 454 578 502 595 762 857 861 727 471 438 460 604 459 497 363 Reticulon-like protein (AHRD V3.3 *** A0A2G3BN58_CAPCH) AT3G10260 Solyc07g044890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein IDA (AHRD V3.3 *** A0A2G3B6Q4_CAPCH) AT1G68765 Solyc07g044900.1 2 6 0 0 0 0 1 0 4 1 1 6 5 7 0 Unknown protein Solyc07g044910.1 0 1 7 4 0 0 0 0 4 0 2 4 4 3 0 Unknown protein Solyc07g044920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3L8R2_TRIPR) Solyc07g044930.3 242 484 381 302 416 467 438 423 367 267 265 358 381 417 368 DExH-box ATP-dependent RNA helicase DExH6-like (AHRD V3.3 *** A0A2I4HVT2_9ROSI) AT2G30800 Solyc07g044960.1 23 55 76 60 30 25 22 22 56 68 114 43 78 62 313 Xyloglucan galactosyltransferase KATAMARI1 (AHRD V3.3 *** A0A2K3L4H3_TRIPR) AT5G62220 Solyc07g044970.1 731 77 10 8 0 0 3 0 11 133 64 5 16 62 80 P-loop containing nucleoside triphosphate hydrolase (AHRD V3.3 *** A0A2U1P4X5_ARTAN),Pfam:PF13671 Solyc07g044980.3 2516 1531 1408 1067 440 489 470 412 981 1950 1501 584 2204 1377 1076 NIM1-like protein 2 Solyc07g044985.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc07g044990.3 192 65 33 59 18 21 21 28 46 87 40 56 78 66 122 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (AHRD V3.3 *** A0A2U1Q6S5_ARTAN) Solyc07g045000.4 3 7 16 4 9 16 2 4 19 4 10 2 16 19 18 Homeodomain-like protein (AHRD V3.3 *-* A0A2U1N2T8_ARTAN) Solyc07g045010.3 392 2121 1771 2244 3588 3160 2786 3667 1982 1607 1802 2763 800 1333 974 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit (AHRD V3.3 *** Q6NMH7_ARATH) AT1G06660 Solyc07g045030.4 129 21 13 20 0 0 0 0 7 9 7 6 5 13 64 NAC domain-containing protein (AHRD V3.3 *** A0A2K3NPJ8_TRIPR) AT2G43000 Solyc07g045040.3 0 0 0 4 0 2 0 1 0 0 0 0 0 0 5 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QB13_ARTAN) Solyc07g045050.3 651 444 393 442 552 409 374 465 390 592 270 446 443 368 466 4-hydroxyphenylpyruvate dioxygenase (AHRD V3.3 *** A0A1U8GPG9_CAPAN) AT1G06570 Solyc07g045060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin responsive protein (AHRD V3.3 *** Q75GP8_ORYSJ) Solyc07g045070.3 1137 1019 747 658 789 792 775 780 538 621 481 701 935 868 716 S-adenosyl-L-methionine-dependent methyltransferase (AHRD V3.3 *** A0A2P4QBT0_RHIID) AT1G06560 Solyc07g045080.3 10 172 168 120 198 254 361 248 212 90 137 216 49 61 59 2-alkenal reductase (NADP(+)-dependent)-like (AHRD V3.3 *** A0A2I4GX13_9ROSI) Solyc07g045090.3 5 1 23 18 4 11 4 9 9 3 11 2 3 8 2 2-alkenal reductase (NADP(+)-dependent)-like (AHRD V3.3 *** A0A2I4GX13_9ROSI) Solyc07g045100.1 174 98 251 75 32 47 60 38 48 88 230 99 99 92 153 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** G7KD30_MEDTR) AT3G59080 Solyc07g045110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g045120.2 2 2 0 1 0 9 0 3 2 0 0 0 0 3 0 Exostosin-like (AHRD V3.3 *** A0A200RAI3_9MAGN) Solyc07g045123.1 2 5 0 0 12 9 5 15 14 10 0 12 1 7 0 RNA-directed DNA polymerase, eukaryota, Reverse transcriptase zinc-binding domain protein (AHRD V3.3 *-* A0A2U1MZ76_ARTAN) Solyc07g045125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc07g045127.1 1 0 0 1 0 2 0 0 2 3 0 0 8 4 0 Unknown protein Solyc07g045140.4 1176 276 240 377 195 239 174 160 237 626 374 516 185 343 514 transmembrane protein (AHRD V3.3 *** AT4G12680.1) AT4G12680 Solyc07g045150.3 831 1280 1145 1320 1251 1002 1414 1071 947 952 821 1013 1211 1199 835 period circadian protein (AHRD V3.3 *** AT3G07640.1) AT3G07640 Solyc07g045160.3 358 172 97 179 19 34 24 29 148 163 108 56 160 125 156 ATP-dependent 6-phosphofructokinase (AHRD V3.3 *** A0A2G2WC06_CAPBA) Solyc07g045170.3 661 1084 879 880 1320 1470 1498 1695 1331 1052 778 1376 766 1198 765 hypothetical protein (AHRD V3.3 *-* AT2G04235.2) AT2G04235 Solyc07g045180.4 789 374 1018 503 114 154 139 123 305 136 926 199 292 536 1385 Zinc finger protein CONSTANS-LIKE 9 (AHRD V3.3 *** A0A2G2WC44_CAPBA) AT5G48250 Solyc07g045190.3 1196 734 811 975 491 530 462 412 645 1056 686 601 1139 878 1639 Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *** A0A2U1QKP4_ARTAN) AT2G04240 Solyc07g045200.1 10 8 11 4 7 9 17 11 10 5 36 9 5 6 9 Serine-rich protein-like protein (AHRD V3.3 *-* Q9FKU6_ARATH) AT5G55980 Solyc07g045210.1 842 1566 1324 1349 1557 1536 1459 1676 1780 1714 1439 1565 1591 1364 1349 calcium ion-binding protein (AHRD V3.3 *** AT4G12700.1) AT2G04280 Solyc07g045220.3 302 243 334 214 282 253 213 213 198 252 245 278 311 267 422 ARM repeat superfamily protein (AHRD V3.3 *** Q9SU15_ARATH) AT4G12710 Solyc07g045230.4 5816 3272 1980 2212 2172 1806 1871 2432 2042 2864 1729 2416 2278 2654 2113 GBF-interacting protein 1-like isoform X1 (AHRD V3.3 *** A0A2I4FNM4_9ROSI) AT3G07660 Solyc07g045240.3 2150 2328 1879 1790 1930 2244 1924 1933 1882 1593 1685 1878 2404 2320 2146 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* A0A2U1LP30_ARTAN) AT3G13224 Solyc07g045250.1 375 502 792 823 759 876 1009 680 554 413 967 527 611 625 846 RNA polymerase-associated protein LEO1 (AHRD V3.3 --* XP_002532344.1) Solyc07g045255.1 217 192 145 208 201 237 193 203 162 206 134 207 165 172 112 Unknown protein Solyc07g045260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 cytoplasmic dynein 2 light intermediate chain (AHRD V3.3 *-* AT2G04340.1) Solyc07g045270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GPCR-type G protein 2 (AHRD V3.3 *-* A0A1P8B836_ARATH) Solyc07g045280.3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Cardiolipin synthase N-terminal (AHRD V3.3 --* A0A200RAL2_9MAGN) Solyc07g045290.3 765 907 808 869 797 749 786 789 874 750 663 749 823 903 971 Long chain acyl-CoA synthetase (AHRD V3.3 *** Q5W6W7_ORYSJ) AT2G04350 Solyc07g045300.4 818 799 878 846 861 939 1067 860 682 842 815 771 644 758 907 transmembrane protein (AHRD V3.3 *** AT2G04360.1) AT2G04360 Solyc07g045310.4 356 344 359 415 370 417 414 353 446 293 381 365 282 387 356 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic (AHRD V3.3 *** A0A1U8HAS0_CAPAN) AT3G07670 Solyc07g045320.3 138 116 119 142 267 185 259 236 157 153 84 203 97 134 126 SAWADEE domain-containing protein (AHRD V3.3 *** A0A2U1MTI3_ARTAN) Solyc07g045330.3 327 348 397 406 513 436 443 501 397 371 466 452 383 361 305 GPCR-type G protein 2 (AHRD V3.3 *** A0A1J3CS42_NOCCA) AT1G64990 Solyc07g045340.4 257 223 423 231 232 176 188 189 190 151 336 145 234 231 328 RPM1-interacting protein 4 (AHRD V3.3 *** A0A2G2WC31_CAPBA) AT2G04410 Solyc07g045350.4 477 1448 1086 1504 2232 2105 2250 2829 2113 1236 1321 2587 1119 1957 681 Acetyl-CoA C-acetyltransferase (AHRD V3.3 *** D9U856_BACMN) AT5G48230 Solyc07g045353.1 62 63 87 37 65 47 70 48 42 38 56 39 55 55 50 zinc finger BED domain-containing protein RICESLEEPER 1-like (AHRD V3.3 *** A0A2I4GJW1_9ROSI) Solyc07g045370.3 390 414 422 292 203 247 248 206 292 160 245 235 496 466 355 Las1-like family protein (AHRD V3.3 *** A0A2U1M3X1_ARTAN) AT5G12220 Solyc07g045380.3 797 451 349 358 268 368 343 338 294 400 394 334 352 367 305 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WC64_CAPBA) AT1G05600 Solyc07g045390.3 302 449 436 555 644 621 595 413 322 326 428 371 562 417 488 50S ribosomal protein l18 (AHRD V3.3 *** A0A2K3P4S5_TRIPR) AT5G27820 Solyc07g045400.1 35 41 30 26 12 23 37 37 39 21 26 37 38 33 16 pentatricopeptide repeat-containing protein At5g61990, mitochondrial (AHRD V3.3 *-* A0A2I4EZP8_9ROSI) Solyc07g045410.2 52 51 66 44 32 72 59 33 44 40 42 36 40 52 40 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200R3T1_9MAGN) Solyc07g045420.4 2547 1729 1475 2504 1331 1339 1394 1227 1716 2030 1550 1594 1792 1759 2203 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1MTH5_ARTAN) AT3G07700 Solyc07g045430.4 6 1 0 0 7 0 0 3 0 1 0 1 3 0 0 Nudix hydrolase (AHRD V3.3 *** A0A2U1KQS6_ARTAN) Solyc07g045440.1 964 4376 3581 4215 4511 3606 3910 4528 5027 4379 4392 3420 3814 2749 3592 Fasciclin-like arabinogalactan protein 2 (AHRD V3.3 *** A0A2G3BYC2_CAPCH) AT4G12730 Solyc07g045450.1 175 196 158 221 250 187 220 196 183 181 139 168 306 156 261 hypothetical protein (AHRD V3.3 *-* AT2G04480.1) AT2G04480 Solyc07g045455.1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc07g045460.3 163 586 536 652 980 1072 1165 753 708 361 798 898 372 639 1353 SNF1-related protein kinase regulatory subunit beta-2 (AHRD V3.3 *** A0A2G3BYB4_CAPCH) Solyc07g045470.3 632 443 456 452 261 312 226 291 435 438 440 368 620 540 344 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (AHRD V3.3 *** A0A2I4EZ32_9ROSI) AT2G05320 Solyc07g045480.3 505 471 565 490 576 562 607 541 519 448 432 426 433 549 582 Phytochrome (AHRD V3.3 *** Q41335_SOLLC) AT5G35840 Solyc07g045490.3 0 1 15 0 0 2 2 4 3 1 0 0 0 0 0 Cytochrome b561 domain-containing protein (AHRD V3.3 *-* A0A1J3EQ91_NOCCA) Solyc07g045500.1 7 19 5 3 2 9 10 7 0 2 16 2 9 2 1 Unknown protein Solyc07g045510.4 35 32 21 29 12 8 13 17 17 15 27 23 24 32 13 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QFA1_9MAGN) AT5G09950 Solyc07g045520.4 113 91 144 145 171 220 178 154 161 149 225 127 126 160 254 FAR1-related sequence 10 (AHRD V3.3 *** A0A1P8BEG3_ARATH) AT5G28530 Solyc07g045525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g045530.2 337 245 334 103 6 11 1 1 45 170 398 23 456 276 128 cilia- and flagella-associated protein 251-like (AHRD V3.3 --* XP_015870144.1) AT3G13130 Solyc07g045540.4 668 728 627 662 967 764 881 1039 911 612 612 785 678 732 746 Glucose-6-phosphate 1-dehydrogenase (AHRD V3.3 *** A0A1U8HAS8_CAPAN) AT5G35790 Solyc07g045550.3 5 15 2 8 33 61 59 57 15 13 19 40 13 8 17 Transcriptional regulator STERILE APETALA (AHRD V3.3 *** A0A1U8GU38_CAPAN) AT5G35770 Solyc07g045560.1 0 0 0 1 0 0 0 0 0 0 0 3 0 2 0 Transcriptional regulator STERILE APETALA (AHRD V3.3 *-* A0A1U8GU38_CAPAN) Solyc07g045565.1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 Unknown protein Solyc07g045570.3 54 27 39 48 18 22 51 35 27 19 37 15 18 34 32 filament-like plant protein 4 (AHRD V3.3 *-* A0A1U7XPP3_NICSY) Solyc07g045580.1 8 3 11 7 0 9 11 8 7 10 16 5 7 26 40 Filament-like plant protein 4 (AHRD V3.3 *-* A0A2G3AQV4_CAPCH) Solyc07g045590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Tracheary element differentiation-related 6 (AHRD V3.3 *** C1PGW0_ZINVI) AT1G43790 Solyc07g045600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g045610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Class I heat shock protein (AHRD V3.3 *-* A0A2K3JRP0_TRIPR) Solyc07g047610.3 301 515 432 504 499 413 554 504 560 337 342 488 616 584 552 Transcriptional adapter (AHRD V3.3 *** A0A1U8HAU7_CAPAN) Solyc07g047620.3 43 93 105 126 133 134 144 122 105 71 147 88 69 95 69 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2Z1V8_CAPAN) AT4G26680 Solyc07g150138.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g047640.2 27 20 42 38 9 14 13 10 9 30 21 6 30 26 59 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) Solyc07g047650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 --* AT2G23170.1) Solyc07g047670.3 7622 7248 6775 5271 4973 4630 4967 5271 5958 5549 5288 6384 7656 7548 6355 Pescadillo homolog (AHRD V3.3 *** A0A2G2WCS4_CAPBA) AT5G14520 Solyc07g047680.3 12 10 19 19 14 28 29 8 8 8 20 11 8 9 11 F-box protein SNE (AHRD V3.3 *** A0A2G3BZC0_CAPCH) AT5G48170 Solyc07g047690.1 584 537 570 594 455 637 513 548 657 539 571 501 520 613 538 DnaJ domain-containing protein (AHRD V3.3 *** A0A2U1M065_ARTAN) AT2G05230 Solyc07g047700.4 424 472 486 495 606 537 488 524 547 534 483 456 682 597 532 hypothetical protein (AHRD V3.3 *** AT2G04900.1) AT2G04900 Solyc07g047710.3 7 23 12 41 35 31 29 29 45 23 38 44 38 17 37 Glucan endo-1,3-beta-glucosidase 1 (AHRD V3.3 *** A0A2G2WCP3_CAPBA) AT5G35740 Solyc07g047720.3 443 498 610 463 531 524 590 489 440 383 587 441 483 485 660 Membrin (AHRD V3.3 *** A0A2G3ALS8_CAPAN) AT2G36900 Solyc07g047740.3 44 16 41 36 23 28 21 13 16 61 65 41 11 24 8 TOMTPX2A peroxidase AT1G05260 Solyc07g047745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8ETX1_CAPAN) Solyc07g047750.3 618 343 364 406 274 348 348 223 256 337 349 313 294 258 420 Unknown protein Solyc07g047770.4 2318 1770 1558 1787 1522 1662 1772 1539 2229 1896 1667 1406 1443 1386 1496 Histidine kinase 2 (AHRD V3.3 *** A0A2G2Z2M2_CAPAN) AT5G35750 Solyc07g047780.3 703 584 866 553 403 437 404 482 695 674 918 504 879 694 576 CONSTANS interacting protein 6 AT5G48160 Solyc07g047790.3 2252 3562 2459 1850 1931 1620 1585 2044 1752 1295 1448 2015 4717 3915 3167 Heat shock protein (AHRD V3.3 *** O23638_ARATH) AT3G07770 Solyc07g047800.3 1796 1315 1327 858 741 731 611 746 1311 1773 1228 809 2103 1273 1017 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q9SG99_ARATH),Pfam:PF13561 AT3G01980 Solyc07g047820.3 176 205 182 179 118 129 150 175 161 136 104 186 150 168 68 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RBT8_9MAGN) Solyc07g047823.1 203 182 242 199 151 159 203 104 112 139 232 163 90 155 204 Unknown protein Solyc07g047827.1 7 6 5 13 21 23 18 21 13 12 14 9 3 4 6 Unknown protein Solyc07g047830.3 714 1413 1314 1522 2103 1886 1937 2488 1504 1366 1126 1562 1291 1427 1115 DUF630 family protein (DUF630 and DUF632) (AHRD V3.3 *-* F4ISE7_ARATH) AT2G19090 Solyc07g047840.2 130 143 172 142 142 152 157 126 129 104 203 160 126 187 145 chaperone (AHRD V3.3 *** AT5G15802.1) AT5G15802 Solyc07g047850.3 6455 12274 3137 8295 24600 26420 22984 21733 10741 10264 2517 6934 8229 1898 1899 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A1U8HAX7_CAPAN) Solyc07g047860.4 861 1407 943 951 1148 1204 1289 1457 1245 912 744 1157 1200 1387 874 Nuclear pore complex protein (AHRD V3.3 *** A0A2G2Z2P8_CAPAN) AT2G05120 Solyc07g047870.1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 Unknown protein Solyc07g047890.4 71 58 58 74 113 78 59 69 83 72 50 83 97 81 59 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 -** AT3G07760.5) Solyc07g047900.3 497 449 531 423 416 565 563 465 541 395 539 433 435 458 469 RNA-binding CRS1 / YhbY (CRM) domain protein (AHRD V3.3 *-* Q9LT57_ARATH) AT3G27550 Solyc07g047910.2 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 MAP kinase kinase kinase 48 Solyc07g047915.1 0 0 0 1 0 1 3 4 0 0 0 0 0 0 0 Unknown protein Solyc07g047920.3 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 Galactoside 2-alpha-L-fucosyltransferase (AHRD V3.3 *** A0A2G2WK06_CAPBA) AT2G03220 Solyc07g047940.4 296 142 111 108 258 241 225 241 117 206 179 125 81 100 56 Zinc finger transcription factor 49 AT2G05160 Solyc07g047950.1 992 717 657 801 646 691 664 731 843 630 715 643 765 886 915 Transcription factor GRAS (AHRD V3.3 *** A0A200QZY2_9MAGN) AT5G48150 Solyc07g047960.3 138 161 199 151 142 145 153 190 230 265 272 193 164 170 289 WRKY transcription factor 1 Solyc07g047970.4 365 376 426 336 517 422 376 425 421 337 454 379 533 357 324 SEC12-like protein 2 (AHRD V3.3 *** A0A2I4FW46_9ROSI) AT5G50650 Solyc07g047980.3 1850 1141 1141 1181 862 1000 996 1014 1273 1581 1569 1220 1218 1117 1280 protein DGCR14 (AHRD V3.3 *** A0A2I4EZ78_9ROSI) AT3G07790 Solyc07g047990.1 0 0 0 3 0 0 0 0 0 0 5 0 0 1 0 MAP kinase kinase kinase 49 Solyc07g048000.3 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 Phototropic-responsive NPH3 (AHRD V3.3 *** D9ZHC8_HYPPE) AT5G48130 Solyc07g048010.4 59 228 181 98 187 190 211 164 123 94 85 137 212 258 110 Thymidylate kinase (AHRD V3.3 *** A0A1J3DB39_NOCCA) AT5G59440 Solyc07g048020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Charged multivesicular body protein 1 (AHRD V3.3 *** A0A1J3D5Q6_NOCCA) Solyc07g048030.4 158 401 201 222 237 309 287 305 280 145 145 227 316 273 234 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4JFN7_ARATH) AT3G07810 Solyc07g048040.1 2191 1529 1643 1632 1094 921 949 967 1223 1393 1679 1327 1386 1576 2095 Calcium-dependent lipid-binding domain-containing protein (AHRD V3.3 *** A0A2K3LFN3_TRIPR) AT5G55530 Solyc07g048050.3 2 56 37 42 49 45 53 52 40 56 29 24 19 18 51 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A1U8H7T2_CAPAN) AT2G04850 Solyc07g048060.3 0 5 29 18 0 0 0 2 2 16 11 3 0 4 12 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *-* A0A2G3BZZ3_CAPCH) Solyc07g048070.3 17 23 4 7 13 13 10 10 18 23 1 6 95 40 10 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A2G2WDB3_CAPBA) Solyc07g048080.4 471 716 345 590 842 823 734 952 681 503 475 659 492 478 411 Threonine--tRNA ligase (AHRD V3.3 *** A0A2G2Z2V0_CAPAN) AT2G04842 Solyc07g048090.2 380 2129 2074 1785 2991 2374 2365 2987 1549 1411 1722 2215 1156 1407 1024 Fasciclin-like arabinogalactan protein 7 (AHRD V3.3 *** A0A2G2Z2X7_CAPAN) AT2G04780 Solyc07g048100.3 16 150 142 116 232 302 257 237 212 64 109 167 102 235 75 BRCT domain-containing protein (AHRD V3.3 *** A0A1Q3BQH7_CEPFO) Solyc07g048110.4 204 253 374 451 798 910 863 620 359 320 686 388 158 218 550 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *** A0A2U1NVV9_ARTAN) AT3G21620 Solyc07g048120.3 322 339 239 259 385 312 332 369 427 358 294 380 355 284 290 ubiquitin fusion degradation protein 1 (AHRD V3.3 *** A0A2I4DSF8_9ROSI) AT4G15420 Solyc07g049120.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1P2G6_ARTAN) Solyc07g049130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1P2G6_ARTAN) Solyc07g049135.1 0 0 0 2 0 0 0 0 0 0 0 0 0 5 0 Fruit-specific protein (AHRD V3.3 *** FSPM_SOLLC) Solyc07g049150.2 5521 2130 2462 1639 801 820 708 680 1148 2051 1811 987 1722 1733 2635 Dicer-like 3 (AHRD V3.3 *-* B3SRQ0_PHYPA) Solyc07g049160.4 324 374 536 508 513 614 564 439 420 251 413 364 428 408 612 ribonuclease 3-like protein 3 (AHRD V3.3 *** A0A2I4DSF4_9ROSI) AT4G15417 Solyc07g049170.2 9 0 0 3 2 0 1 0 0 5 0 0 0 1 0 Unknown protein Solyc07g049180.3 1047 607 1053 614 251 264 275 290 499 788 855 302 512 596 722 LysM receptor-like kinase (AHRD V3.3 *** E2FYC4_SOLLC) AT3G21630 Solyc07g049190.4 81 48 35 40 15 22 29 34 84 103 63 49 59 54 23 LysM receptor-like kinase (AHRD V3.3 *-* E2FYC4_SOLLC) Solyc07g049200.4 217 196 164 256 215 169 149 242 217 276 244 287 266 182 167 coiled-coil protein (AHRD V3.3 *** AT1G05060.1) AT1G05060 Solyc07g049210.3 842 686 798 911 856 898 1021 609 525 495 753 666 572 634 778 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (AHRD V3.3 *** A0A2U1QHU8_ARTAN) AT4G22140 Solyc07g049215.1 7 5 4 9 3 2 10 6 2 3 0 9 2 1 0 Unknown protein Solyc07g049220.4 764 746 821 742 671 904 842 723 632 548 758 660 706 772 707 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *-* A0A2G2WCX9_CAPBA) Solyc07g049230.1 289 349 302 232 254 161 200 203 233 191 237 212 333 462 317 RmlC-like cupins superfamily protein (AHRD V3.3 *** AT2G32650.2) AT2G32180 Solyc07g049240.3 0 0 0 0 6 7 9 6 0 0 0 3 2 1 0 Peroxidase (AHRD V3.3 *** K4CF27_SOLLC) AT1G05260 Solyc07g049250.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 1 (AHRD V3.3 *-* A0A1U8FIJ8_CAPAN) Solyc07g049260.4 986 1305 1217 1119 1375 1360 1163 1530 1244 1218 1240 1312 1724 1493 1217 plant UBX domain-containing protein 4-like (AHRD V3.3 *** A0A1S3YUP2_TOBAC) AT4G15410 Solyc07g049270.4 75 63 60 49 52 43 23 24 31 61 77 41 66 49 77 RNA-binding protein (AHRD V3.3 *-* Q941H8_SOLTU) AT3G08000 Solyc07g049280.3 343 338 379 294 381 327 321 371 329 267 227 351 310 441 253 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (AHRD V3.3 *** A0A2G2Z2T1_CAPAN) Solyc07g049290.3 2597 1971 1307 1315 2099 1841 1908 2041 1957 3052 1613 1633 1584 1179 1665 Protein NRT1/ PTR FAMILY 6.4 (AHRD V3.3 *** A0A2G2Z2Y2_CAPAN) AT3G21670 Solyc07g049300.3 117 577 656 773 767 805 829 819 1107 698 1431 899 550 508 629 Endoglucanase (AHRD V3.3 *** A0A2G2WCY0_CAPBA) AT2G32990 Solyc07g049310.3 148 183 296 279 351 286 362 249 296 279 408 283 216 264 359 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1QGR0_ARTAN) AT1G05030 Solyc07g049320.4 112 444 386 651 639 686 649 496 354 227 254 348 318 587 351 Nucleobase-ascorbate transporter 1 (AHRD V3.3 *** A0A1U8FC42_CAPAN) AT2G05760 Solyc07g150139.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 182 (AHRD V3.3 -** XP_011080983.1) Solyc07g049340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g049350.3 661 512 1100 728 494 630 646 578 588 732 815 705 759 782 921 G1/S-specific cyclin-E protein (AHRD V3.3 *** AT2G32970.4) AT2G32970 Solyc07g049360.3 4087 3773 4732 4581 3280 3590 3725 3076 3738 3289 4102 3457 5756 5478 4169 Small ubiquitin-related modifier (AHRD V3.3 *** A0A1U8FER0_CAPAN) Solyc07g049370.2 1352 5485 4775 4262 8125 7457 6605 9102 5038 5005 4015 6104 3637 4870 2559 Glucan endo-1,3-beta-glucosidase 3 (AHRD V3.3 *** A0A1J3FSS7_NOCCA) AT2G05790 Solyc07g049380.1 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *-* A0A2U1N0Z9_ARTAN) AT1G05020 Solyc07g150140.1 291 312 794 600 523 774 582 329 247 344 833 380 262 280 501 Unknown protein Solyc07g049390.3 331 449 526 543 603 528 587 550 631 528 480 589 443 457 266 ARM repeat superfamily protein (AHRD V3.3 *** Q8S8G1_ARATH) AT2G05810 Solyc07g049410.3 485 427 423 548 386 408 427 420 383 362 431 389 349 495 423 Protein-tyrosine-phosphatase IBR5 (AHRD V3.3 *** A0A1U8E2D0_CAPAN) AT2G04550 Solyc07g049400.1 40 70 182 79 122 217 163 96 186 35 161 98 57 92 48 RING/U-box superfamily protein (AHRD V3.3 *** Q5XV87_ARATH) Solyc07g049405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4EGG2_9ROSI) Solyc07g049420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S acidic ribosomal protein P1 (AHRD V3.3 *** A0A1U8FRL2_CAPAN),Pfam:PF00428 Solyc07g049430.3 39 72 115 130 186 156 114 154 70 48 69 128 37 95 59 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2Z312_CAPAN) Solyc07g049440.3 1199 870 834 920 121 128 89 85 608 705 539 462 814 683 1502 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2Z2Z1_CAPAN) AT2G04570 Solyc07g049450.3 815 2113 1416 1487 1774 1876 2028 1970 1935 1278 1437 1787 3216 2428 2065 Protein disulfide-isomerase like 2-2 (AHRD V3.3 *** A0A2G3C063_CAPCH) AT1G04980 Solyc07g049460.3 0 5 0 2 1 4 2 6 4 0 4 0 1 0 0 laccase AT3G09220 Solyc07g049470.4 190 170 114 173 172 128 110 129 137 172 151 131 167 152 184 Triacylglycerol lipase-like protein (AHRD V3.3 *** Q84JL8_ARATH) AT1G04985 Solyc07g049480.3 2278 2119 1792 1404 1725 1392 1396 1781 1617 1703 1198 1914 1656 1937 1555 Cleavage and polyadenylation specificity factor subunit 3 (AHRD V3.3 *** A0A2G2XER9_CAPBA) AT1G61010 Solyc07g049490.3 528 584 612 635 620 858 687 704 522 526 649 509 657 480 578 Ethylene Response Factor F.3 Solyc07g049495.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g049500.3 1411 1420 1077 949 1484 1396 1522 1463 982 1190 868 1265 1369 1258 970 Argonaute6 AT2G32940 Solyc07g049505.1 26 18 33 14 28 15 15 23 29 15 7 27 15 10 2 Unknown protein Solyc07g049510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *-* A0A2K3P6D1_TRIPR) Solyc07g049520.2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 TRAF-like family protein (AHRD V3.3 *** F4J556_ARATH) Solyc07g049525.1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 Unknown protein Solyc07g049530.3 1221 878 817 301 45 66 42 84 246 1055 1490 315 2208 1260 648 1-aminocyclopropane-1-carboxylate oxidase 1 AT1G05010 Solyc07g049540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter B family member 7 (AHRD V3.3 *-* A0A2G2XE24_CAPBA) Solyc07g049550.3 76 87 75 94 11 29 43 47 205 113 257 10 63 81 28 1-aminocyclopropane-1-carboxylate oxidase 2 (AHRD V3.3 *** Q7Y257_BETPN) Solyc07g049560.3 237 121 136 70 194 142 170 211 67 161 150 91 120 100 89 Protein-tyrosine phosphatase (AHRD V3.3 *** A0A200RBI0_9MAGN) AT1G05000 Solyc07g049563.1 24 13 18 31 71 56 39 42 13 16 65 45 4 8 9 Unknown protein Solyc07g049565.1 4 8 7 9 12 61 19 24 10 7 10 9 6 4 8 Unknown protein Solyc07g049567.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G2W4T7_CAPBA) Solyc07g049570.3 375 391 430 393 375 525 469 363 386 263 409 293 413 419 429 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** A0A2G2WHD0_CAPBA) AT2G04540 Solyc07g049580.3 159 217 291 240 296 278 273 308 245 233 267 231 152 200 216 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1LL89_ARTAN) AT3G07890 Solyc07g049590.3 301 232 184 246 191 181 184 190 225 144 172 181 200 236 213 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2WD17_CAPBA) AT2G04740 Solyc07g049600.4 0 0 12 3 3 1 0 1 6 6 6 1 1 0 0 Fimbrin-5 (AHRD V3.3 *** A0A2G3C0C2_CAPCH) Solyc07g049610.1 951 1370 923 1712 1618 1392 1469 2493 1217 1730 1449 1295 1156 1023 1090 Xyloglucan galactosyltransferase KATAMARI1 (AHRD V3.3 *** A0A1J3FXZ4_NOCCA) AT5G62220 Solyc07g049630.1 683 877 751 860 953 901 930 812 666 938 832 742 806 584 741 Unknown protein Solyc07g049635.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3K151_TRIPR) ATMG00240 Solyc07g049640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-like transcription factor family protein (AHRD V3.3 *-* A0A2K3LRI2_TRIPR) Solyc07g049645.1 64 22 25 44 24 25 29 9 11 24 61 4 53 67 26 Benzyl alcohol O-benzoyltransferase (AHRD V3.3 *** BEBT_TOBAC) Solyc07g049650.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 5 Unknown protein Solyc07g049655.1 110 25 18 18 3 6 9 5 7 16 24 10 51 72 16 Benzyl alcohol O-benzoyltransferase (AHRD V3.3 *** BEBT_TOBAC) Solyc07g049670.4 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 Alcohol acyl transferase (AHRD V3.3 *** Q6QLX5_PYRCO) AT5G17540 Solyc07g049680.4 196 683 512 609 901 915 859 1140 663 580 518 914 329 523 337 Condensin complex subunit 2 (AHRD V3.3 *** A0A2G2WDS5_CAPBA) AT2G32590 Solyc07g049690.3 664 717 925 1350 542 659 635 497 1276 1347 1065 1133 814 804 1031 hydroperoxide lyase AT4G15440 Solyc07g049700.1 73 54 29 71 24 28 30 18 45 30 66 38 29 21 45 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc07g049710.3 304 395 563 612 784 783 831 650 520 408 577 494 412 453 733 V-type proton ATPase subunit e1 (AHRD V3.3 *** A0A1U8G2Q5_CAPAN) AT5G55290 Solyc07g049720.4 7381 5017 4576 5153 4339 4744 4759 4783 4616 4959 4312 4338 4102 5030 5027 10kDa polypeptide precursor of photosystem 2 AT5G55300 Solyc07g049730.3 951 1358 1764 1521 1657 1802 1661 1697 1440 1735 2060 1332 1809 1386 1795 Transmembrane protein, putative (DUF1068) (AHRD V3.3 *** F4JGC5_ARATH) AT1G05070 Solyc07g049740.4 177 205 245 310 305 270 297 216 239 159 273 236 203 258 260 Lipid-A-disaccharide synthase (AHRD V3.3 *** A0A2K3MQP4_TRIPR) AT2G04560 Solyc07g049750.3 1356 1409 1284 1321 1475 1370 1373 1828 1655 1841 1383 1701 1656 1342 1104 Dentin sialophosphoprotein-like protein (AHRD V3.3 *-* F4JVM4_ARATH) AT1G05090 Solyc07g049760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CCR4-NOT transcription complex subunit 9-like (AHRD V3.3 *-* XP_025888009.1) Solyc07g049770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell differentiation RCD1 (AHRD V3.3 *** A0A2P6TQA4_CHLSO),Pfam:PF04078 Solyc07g049780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell differentiation, Rcd1-like protein (AHRD V3.3 *-* Q9LXU1_ARATH),Pfam:PF04078 Solyc07g049790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell differentiation protein RCD1-like protein (AHRD V3.3 *** A0A2G2ZX78_CAPAN),Pfam:PF04078 Solyc07g049800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell differentiation protein RCD1 (AHRD V3.3 *-* A0A2U1KIG1_ARTAN),Pfam:PF04078 Solyc07g049805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cell differentiation protein rcd1-like (AHRD V3.3 *-* XP_010323843.1) Solyc07g051800.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g051810.2 0 0 0 1 7 2 0 0 1 0 0 0 0 0 0 Cell differentiation protein RCD1-like protein (AHRD V3.3 *** A0A2G3CUT5_CAPCH) Solyc07g051820.3 83 93 11 44 76 57 57 67 55 66 17 33 114 46 34 Cellulose synthase (AHRD V3.3 *** A0A200PYU7_9MAGN) AT2G32530 Solyc07g051840.4 468 195 209 348 37 84 44 37 123 146 229 123 238 230 185 WRKY transcription factor 17 Solyc07g051845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g051850.3 8844 4828 6537 5412 3890 3781 3333 4108 5783 7806 5346 5539 6769 6482 5565 aspartic proteinase-like (AHRD V3.3 *** A0A2I4H0Z7_9ROSI) Solyc07g051860.1 99 29 2 6 2 14 4 1 4 12 2 3 5 10 0 MAP kinase kinase kinase 50 Solyc07g051870.1 10 0 0 2 0 0 1 0 2 0 8 2 3 3 10 MAP kinase kinase kinase 51 Solyc07g051880.1 43 19 4 10 1 0 2 0 2 18 11 6 5 6 29 MAP kinase kinase kinase 52 Solyc07g051883.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) Solyc07g051887.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc07g051890.1 33 12 2 9 6 3 0 1 7 13 5 4 0 0 3 MAP kinase kinase kinase 53 Solyc07g051920.1 0 4 0 0 6 3 7 10 0 4 0 1 27 4 12 MAP kinase kinase kinase 54 Solyc07g051930.3 10 9 20 12 15 17 14 7 8 18 29 15 16 12 42 MAP kinase kinase kinase 55 Solyc07g051940.4 6 17 27 10 0 1 0 0 12 3 6 1 8 25 7 Sesquiterpene synthase (AHRD V3.3 *** G8H5N2_SOLHA) Solyc07g051950.3 0 0 13 15 0 1 1 2 10 1 14 0 6 0 0 S-type anion channel SLAH1 (AHRD V3.3 *** A0A2G2WD71_CAPBA) Solyc07g051960.3 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *-* A0A200QH53_9MAGN) Solyc07g051970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BnaAnng12340D protein (AHRD V3.3 *** A0A078IU57_BRANA) Solyc07g051980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BnaAnng12340D protein (AHRD V3.3 *** A0A078IU57_BRANA) Solyc07g051990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein LAZ1-like isoform X1 (AHRD V3.3 *-* A0A1U8FGQ5_CAPAN) Solyc07g052000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Helicase/SNF2 domain-containing protein (AHRD V3.3 *-* K9NNC1_9PSED) Solyc07g052010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (AHRD V3.3 *-* A0A1I9LTA6_ARATH) Solyc07g052020.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BnaAnng12340D protein (AHRD V3.3 *** A0A078IU57_BRANA) Solyc07g150141.1 15 7 0 0 0 0 0 0 3 0 1 0 0 7 0 SNF2_N domain-containing protein/Helicase_C domain-containing protein/zf-C3HC4_2 domain-containing protein (AHRD V3.3 *-* A0A1Q3C0L7_CEPFO) Solyc07g052040.3 3 4 3 2 8 3 7 4 3 1 5 7 1 10 0 Tubulin beta chain (AHRD V3.3 *-* A0A0A9Z7R0_LYGHE) Solyc07g052050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pre-mRNA-splicing factor 18 (AHRD V3.3 *-* A0A2I4GH45_9ROSI) Solyc07g052060.2 0 2 1 27 0 4 1 0 35 96 29 124 3 4 3 Pelargonidin 3-o-(6-caffeoylglucoside) 5-o-(6-o-malonylglucoside) 4'''-malonyltransferase (AHRD V3.3 *** G9HTF6_NICAT) Solyc07g052070.3 1 0 9 0 0 0 0 0 2 0 0 1 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G3C1F9_CAPCH) AT3G14690 Solyc07g052075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G3BCL0_CAPCH) Solyc07g052100.4 11 144 14 54 107 67 79 53 55 29 26 63 17 57 2 SNF2-related (AHRD V3.3 *** A0A200QH53_9MAGN) AT1G05120 Solyc07g052110.4 1941 1596 1300 878 973 1170 998 1080 1124 969 1102 1066 1653 1729 1440 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A1P8B458_ARATH) AT4G26600 Solyc07g052120.4 0 0 0 0 0 2 0 0 1 0 0 0 0 2 0 Sesquiterpene synthase (AHRD V3.3 *** A0A2G3AYX6_CAPCH) Solyc07g052150.4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Sesquiterpene synthase (AHRD V3.3 *** A0A2G3AYX6_CAPCH) AT5G23960 Solyc07g052160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g052165.1 1 2 0 0 0 0 0 0 0 1 3 0 0 0 0 Unknown protein Solyc07g052170.1 2 4 4 3 11 5 4 0 4 3 3 6 12 5 7 Dirigent protein (AHRD V3.3 *** K4CFB6_SOLLC) Solyc07g052180.1 18 33 87 70 20 36 20 21 32 67 74 59 50 32 4 glycine-rich cell wall structural protein 1-like (AHRD V3.3 *-* XP_010324095.1) Solyc07g052190.1 11 6 11 1 2 3 0 0 1 0 2 0 3 3 3 pre-mRNA-splicing factor 18 (AHRD V3.3 *** A0A2I4GH45_9ROSI) Solyc07g052200.1 1 2 0 0 1 0 0 1 0 3 0 0 0 0 0 Pre-mRNA-splicing factor syf2 (AHRD V3.3 *-* A0A1J3JVC4_NOCCA) Solyc07g052210.2 10 22 20 18 4 10 7 21 12 14 11 14 7 18 5 glycine-rich cell wall structural protein 1-like (AHRD V3.3 *-* XP_025888011.1) Solyc07g052220.1 9 8 15 4 1 7 1 6 8 7 7 8 6 7 8 glycine-rich cell wall structural protein 1-like (AHRD V3.3 *-* XP_019070286.1) Solyc07g052230.3 613 543 686 343 277 215 344 274 481 487 386 386 775 435 524 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A1U8HJB7_CAPAN) Solyc07g052240.3 219 900 833 545 839 1004 1167 833 1173 550 1185 839 862 617 344 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A2G2V9R9_CAPBA) Solyc07g052250.4 1 0 8 15 0 0 0 0 0 0 0 0 0 0 42 Unknown protein Solyc07g150142.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g052260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g052270.3 0 0 0 1 0 0 0 0 0 0 3 0 0 0 2 11-beta-hydroxysteroid dehydrogenase-like 6 (AHRD V3.3 *** A0A2G2XQ02_CAPBA) Solyc07g150143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) Solyc07g052290.1 197 173 180 169 236 184 240 246 178 195 215 154 142 192 183 Membrane metalloprotease ARASP, chloroplastic (AHRD V3.3 *** A0A2G3AYX5_CAPCH) AT2G32480 Solyc07g052300.3 0 3 0 0 3 0 6 12 0 0 0 0 0 0 0 R2R3MYB transcription factor 101 AT2G32460 Solyc07g052310.1 29 128 114 103 155 117 128 97 112 46 136 71 97 108 103 Unknown protein Solyc07g052320.3 357 445 390 414 356 469 491 299 566 322 357 249 445 341 335 Hexosyltransferase (AHRD V3.3 *** A0A2G2WDG1_CAPBA) AT1G05170 Solyc07g052330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-acyltransferase (AHRD V3.3 *** A0A2I4GX59_9ROSI) Solyc07g052340.4 430 678 821 866 901 1093 1130 744 562 511 894 662 695 972 833 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein (AHRD V3.3 *** F4ITQ7_ARATH) AT2G32415 Solyc07g052350.3 3311 4676 3896 3970 4149 3518 4131 4712 5384 4832 3991 4048 5791 5071 3833 Aconitate hydratase (AHRD V3.3 *** A0A200Q7Z0_9MAGN) AT2G05710 Solyc07g052360.2 0 0 0 1 0 3 1 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT1G61900.1) Solyc07g052365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L2B9_TRIPR) Solyc07g052370.4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Cytochrome 71D7 (AHRD V3.3 *** A0A2G2WD66_CAPBA) Solyc07g052380.3 0 7 21 5 5 8 12 6 7 7 6 19 10 10 1 Protein DETOXIFICATION (AHRD V3.3 *** A0A1J7GU23_LUPAN) AT3G21690 Solyc07g052390.3 566 634 960 869 604 832 823 577 713 761 949 692 427 667 658 glutamate receptor-like 3.1 AT2G32400 Solyc07g052400.3 712 790 1104 923 754 805 1035 612 2141 1840 2475 1389 810 873 776 glutamate receptor-like 3.2 AT1G05200 Solyc07g052410.4 0 15 2 25 62 35 25 36 8 1 25 10 6 12 1 Ras-related small GTP-binding family protein (AHRD V3.3 *** A0A2U1P8S5_ARTAN) Solyc07g052420.3 283 318 435 401 311 416 330 292 294 216 445 253 401 410 312 hexokinase-1 protein (AHRD V3.3 *** AT1G05205.1) AT1G05205 Solyc07g052430.3 117 393 289 430 502 470 471 424 455 379 429 457 383 314 400 transmembrane protein 97-like (AHRD V3.3 *** A0A2I4FME0_9ROSI),Pfam:PF10914 AT2G32380 Solyc07g052440.3 31 75 126 110 155 184 160 174 43 73 99 94 100 86 84 transmembrane protein 97-like (AHRD V3.3 *** A0A2I4FME0_9ROSI),Pfam:PF10914 AT2G32380 Solyc07g052445.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g052460.3 15 17 7 7 5 0 4 3 3 7 7 2 22 17 28 transmembrane protein (AHRD V3.3 *** AT3G21710.2) AT3G21710 Solyc07g052470.3 110 102 75 66 43 59 32 38 132 82 97 68 117 110 156 Syntaxin-132 (AHRD V3.3 *** A0A2U1NHB7_ARTAN) Solyc07g052480.3 7082 4715 3931 2900 5050 6476 6524 5826 5241 10138 6493 4578 942 3793 2070 isocitrate lyase LEU18678 AT3G21720 Solyc07g052485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g052490.4 6 0 1 5 17 10 12 10 5 15 3 11 9 3 0 MYB-like transcription factor ETC1 (AHRD V3.3 *** A0A2G2Z3N9_CAPAN) Solyc07g052500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 polyubiquitin-like (AHRD V3.3 *** A0A2I4HRB2_9ROSI) AT2G32350 Solyc07g052510.4 110 186 647 605 90 77 87 72 667 611 1308 162 452 265 789 peroxidase (TPX1) AT1G05260 Solyc07g052530.3 1 0 0 0 0 2 0 6 0 0 0 0 0 1 0 Peroxidase (AHRD V3.3 *** K4CFF2_SOLLC) AT1G05260 Solyc07g052540.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4CFF3_SOLLC) AT1G05260 Solyc07g052550.2 13 3 3 1 2 4 3 4 8 8 9 0 26 1 13 Peroxidase (AHRD V3.3 *** K4CFF4_SOLLC) AT1G05260 Solyc07g052555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g052560.3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 10 traB domain-containing protein-like (AHRD V3.3 *** A0A2I4HRB9_9ROSI) Solyc07g052570.4 340 311 262 256 254 341 279 260 251 198 204 173 366 249 235 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *** A0A2G2Z378_CAPAN) AT3G21820 Solyc07g052590.1 62 106 80 88 88 109 160 142 104 100 45 116 68 85 98 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QZ18_9MAGN) AT1G71460 Solyc07g052600.3 2722 1974 2228 2432 1776 1858 1998 1414 1397 1768 2270 1695 2217 1953 2218 Peroxisome biogenesis protein 22 (AHRD V3.3 *** A0A2G2WDD6_CAPBA) AT3G21865 Solyc07g052610.3 26 72 75 75 64 52 46 42 63 24 23 19 33 24 98 cyclinU1_1 AT3G21870 Solyc07g052620.1 48 30 8 44 16 5 13 7 14 25 6 2 37 49 51 B-box zinc finger protein 32 (AHRD V3.3 *** A0A2G2WDE5_CAPBA) AT4G15248 Solyc07g052630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (DUF604) (AHRD V3.3 *** F4JJF6_ARATH) Solyc07g052640.3 329 313 241 417 308 254 304 375 252 342 242 341 288 321 180 Glycosyltransferase (DUF604) (AHRD V3.3 *** F4JJF6_ARATH) AT4G15240 Solyc07g052650.2 0 6 0 3 0 0 1 0 0 0 18 0 0 3 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CI87_CEPFO) AT1G05280 Solyc07g052660.1 1 1 0 0 1 1 5 7 2 2 2 4 0 0 0 Early nodulin-like protein 1-like (AHRD V3.3 *-* A0A2K3MXQ1_TRIPR) AT2G32300 Solyc07g052670.3 134 157 145 158 145 158 195 161 127 130 118 134 193 148 270 bHLH transcription factor 053 Solyc07g052680.1 141 409 512 908 1068 768 962 845 449 451 550 699 488 552 305 lysine-rich arabinogalactan protein 19 (AHRD V3.3 *-* XP_010324089.1) AT3G22070 Solyc07g052690.4 60 110 241 190 146 162 171 116 317 170 423 214 132 156 386 Beta-amylase (AHRD V3.3 *** A0A2G3BZU4_CAPCH) AT4G15210 Solyc07g052700.3 407 386 663 393 979 905 903 896 619 441 504 450 496 374 418 MADS-box transcription factor (AHRD V3.3 *** A0A2K3PNN3_TRIPR) Solyc07g052710.1 16 5 0 7 6 5 13 8 13 10 0 11 1 11 0 PHD finger protein ALFIN-LIKE 4 (AHRD V3.3 *-* A0A2G2ZB98_CAPAN) Solyc07g052720.4 508 248 341 316 550 728 824 361 212 236 372 276 317 288 409 MADS-box transcription factor (AHRD V3.3 *-* A0A2K3PNN3_TRIPR) AT2G26320 Solyc07g052730.3 47 53 19 25 167 176 176 205 83 83 30 87 22 79 29 formin I2I isoform Solyc07g052740.3 178 169 128 74 164 164 161 195 137 115 154 170 157 148 95 STOREKEEPER protein (AHRD V3.3 *-* STK_SOLTU) Solyc07g052750.1 13 2 7 6 3 12 3 1 5 5 4 4 5 5 7 STOREKEEPER protein (AHRD V3.3 *-* STK_SOLTU) Solyc07g052760.3 412 712 562 473 616 636 536 852 723 540 412 598 893 750 420 DNA-binding storekeeper transcriptional regulator (AHRD V3.3 *-* A0A2K3LQD1_TRIPR) AT1G61730 Solyc07g052770.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3MNP1_TRIPR) Solyc07g052780.3 2 3 0 0 0 0 1 1 3 17 7 0 6 4 1 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* A0A2U1MH42_ARTAN) AT5G38344 Solyc07g052785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 --* A0A2K3P849_TRIPR) Solyc07g052790.3 33 27 16 22 0 0 6 0 14 36 50 2 44 40 33 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** F4KIC7_ARATH) Solyc07g052800.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3MNP1_TRIPR) Solyc07g052810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Formin-like protein (AHRD V3.3 *-* A0A2G2Z2B0_CAPAN) Solyc07g052813.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc07g052817.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 formin-like protein 5 (AHRD V3.3 --* XP_022716970.1) Solyc07g052820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 STOREKEEPER protein (AHRD V3.3 *-* STK_SOLTU) Solyc07g052830.4 270 254 187 207 219 205 181 269 244 190 201 185 247 232 164 DNA-binding storekeeper transcriptional regulator (AHRD V3.3 *-* A0A2K3LQD1_TRIPR) AT1G61730 Solyc07g052840.1 118 119 44 94 44 44 44 55 55 58 36 48 39 70 29 formin I2I (AHRD V3.3 *-* NP_001289832.2) Solyc07g052860.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 STOREKEEPER protein (AHRD V3.3 *-* STK_SOLTU) Solyc07g052870.2 31 29 7 16 3 5 6 1 12 20 0 5 7 26 17 STOREKEEPER protein (AHRD V3.3 *-* STK_SOLTU) Solyc07g052880.4 334 139 120 149 85 97 93 73 89 123 115 69 123 111 87 Formin-like protein (AHRD V3.3 *-* A0A2G2Z2B0_CAPAN) Solyc07g052885.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g052900.1 1624 2399 1654 1156 1667 1683 1397 2130 1959 1455 1258 1851 2775 1994 1137 DNA-binding storekeeper transcriptional regulator (AHRD V3.3 *-* A0A2K3LQD1_TRIPR) AT1G61730 Solyc07g052910.3 24 50 51 52 32 63 59 23 27 35 88 24 40 26 62 Transmembrane protein, putative (DUF1218) (AHRD V3.3 *** A0A1P8B4W6_ARATH) AT2G32280 Solyc07g052913.1 387 251 397 348 328 297 300 252 227 239 321 241 288 294 316 krueppel-like factor (AHRD V3.3 *** AT5G16950.1) AT5G16950 Solyc07g052917.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Unknown protein Solyc07g052930.3 123 35 56 17 70 74 76 55 67 99 24 114 23 43 64 bHLH transcription factor141 Solyc07g052940.4 1883 1981 2152 1797 1843 2206 2247 2033 2499 1696 1793 1945 1534 2190 1927 Histone-lysine N-methyltransferase ATXR3 (AHRD V3.3 *** A0A2G2WCZ8_CAPBA) AT4G15180 Solyc07g052950.3 47 46 4 42 7 8 14 14 28 12 9 25 52 37 172 Unknown protein AT5G54585 Solyc07g052960.3 5 49 140 163 61 69 27 53 22 54 29 108 9 103 18 GRAS family TF Solyc07g052970.3 12 16 53 34 43 34 30 34 33 43 46 18 34 43 41 BTB domain-containing protein/NPH3 domain-containing protein (AHRD V3.3 *** A0A1Q3D7J0_CEPFO) AT3G22104 Solyc07g052980.3 5136 8967 15740 6226 10366 9758 9929 9459 11178 6535 16519 11298 4553 5098 4496 xyloglucan endotransglycosylase/hydrolase 16 AT4G03210 Solyc07g052985.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc07g052990.1 276 213 237 152 19 19 14 18 107 115 321 99 231 163 173 Unknown protein Solyc07g053000.1 24 12 6 27 2 0 0 1 20 27 9 12 50 27 27 Fasciclin domain-containing protein (AHRD V3.3 *** A0A1Q3BT83_CEPFO) AT5G06920 Solyc07g053010.3 625 439 541 582 196 144 178 145 416 353 526 191 739 640 898 Disease resistance protein (AHRD V3.3 *** A0A200QY03_9MAGN) Solyc07g053020.3 1775 2157 1203 1257 873 994 1082 934 1656 1375 1264 1081 3742 1651 1265 Disease resistance protein (AHRD V3.3 *** A0A200QY03_9MAGN) Solyc07g053025.1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g053030.4 258 218 401 543 14 11 0 2 110 224 110 60 152 163 453 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1LNK3_ARTAN) Solyc07g053035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PDV1_TRIPR) Solyc07g053040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain, cyclin-like protein (AHRD V3.3 *** A0A2U1PDA6_ARTAN) AT4G03220 Solyc07g053050.1 247 78 225 72 31 57 51 47 92 85 272 91 93 92 151 Calcium-binding protein PBP1 (AHRD V3.3 *** A0A1U8HB91_CAPAN) Solyc07g053060.3 962 676 594 706 512 533 548 544 631 665 624 584 632 658 532 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3D0A2_CAPCH) AT2G30780 Solyc07g053070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Purple acid phosphatase (AHRD V3.3 *** A0A2I4ERF6_9ROSI) AT1G56360 Solyc07g053080.4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Receptor protein kinase (AHRD V3.3 *** Q40096_IPOTF) Solyc07g053100.4 17 15 64 93 77 55 64 70 48 72 85 72 53 31 92 Receptor protein kinase (AHRD V3.3 *** Q40096_IPOTF) Solyc07g053110.3 0 1 21 0 0 0 0 0 3 3 24 0 0 1 2 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G2Z069_CAPAN) Solyc07g053120.4 131 142 422 313 120 84 103 78 230 225 426 136 225 159 231 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2Z3H8_CAPAN) AT4G03230 Solyc07g053130.4 641 358 231 217 0 2 2 5 134 250 209 34 489 177 140 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2Z3R4_CAPAN) AT4G03230 Solyc07g053140.3 2619 1973 131 834 674 566 555 549 602 1067 96 609 934 207 246 Zinc finger protein/CONSTANS-like protein (AHRD V3.3 *-* A0A2K3M573_TRIPR) AT4G27310 Solyc07g053150.3 192 258 197 247 201 180 186 190 161 216 113 202 338 172 116 Frataxin, mitochondrial (AHRD V3.3 *** A0A2G2Z3B1_CAPAN) AT4G03240 Solyc07g053155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g053160.4 586 537 1859 1108 519 550 531 451 439 494 610 464 432 545 684 DUF1644 domain-containing protein (AHRD V3.3 *-* A0A1Q3DJC6_CEPFO) Solyc07g053170.4 2712 1655 3097 2177 1258 1589 1613 1230 1365 2359 2054 1324 1812 1854 2355 MAP kinase kinase kinase 56 AT4G08500 Solyc07g053180.3 2859 2884 1995 3185 2248 2728 2622 2114 2303 1990 1551 1541 3105 2321 2523 Outer arm dynein light chain 1 protein (AHRD V3.3 *** A0A2U1P980_ARTAN) AT4G03260 Solyc07g053190.4 1266 1037 1033 805 939 1094 1027 1025 1032 967 894 1100 1019 1187 869 Enhancer of polycomb-like protein (AHRD V3.3 *** A0A2G2WDD8_CAPBA) AT5G04670 Solyc07g053200.4 825 380 284 517 63 89 66 50 270 391 364 271 547 394 722 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A2U1N8C2_ARTAN) Solyc07g053210.3 31 34 39 58 67 62 36 76 32 37 50 72 62 64 21 DNA repair metallo-beta-lactamase (AHRD V3.3 *** A0A200QRW4_9MAGN) AT1G27410 Solyc07g053220.2 1613 847 791 760 340 330 292 277 785 991 767 501 990 1018 1238 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2WDS9_CAPBA) AT2G19130 Solyc07g053225.1 63 37 37 42 6 16 4 5 49 29 50 12 68 71 25 Unknown protein Solyc07g053230.3 293 122 193 8 7 0 0 0 4 78 321 7 130 51 58 R2R3MYB transcription factor 83 Solyc07g053240.3 0 3 11 2 0 0 2 0 0 5 0 0 1 2 0 R2R3MYB transcription factor 81 Solyc07g053250.3 1162 644 626 693 466 441 541 504 509 645 582 547 515 617 738 F-box protein isoform X1 (AHRD V3.3 *-* XP_025887864.1) Solyc07g053260.3 5526 5896 5390 5043 6751 7293 6124 6951 5387 4980 4990 5803 6753 5908 5776 tft9 AT2G42590 Solyc07g053270.3 117 554 625 508 942 1034 1090 1104 416 245 500 627 302 483 591 HAD hydrolase (AHRD V3.3 *** A0A200Q0S9_9MAGN) Solyc07g053280.4 37922 22657 15357 18234 12239 12342 11754 12515 15854 19446 14210 16774 17247 16808 17130 Ketol-acid reductoisomerase (AHRD V3.3 *** K4CFM5_SOLLC) AT3G58610 Solyc07g053290.3 422 290 388 470 220 211 145 136 386 407 393 222 659 509 608 bHLH transcription factor 054 Solyc07g053300.1 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ABC transporter G family member 10 (AHRD V3.3 *** A0A1U8FBD6_CAPAN) Solyc07g053310.3 575 576 649 617 739 613 741 737 697 768 870 734 636 637 758 Adaptin ear-binding coat-associated protein (AHRD V3.3 *** G5DW96_SILLA) AT3G58600 Solyc07g053320.4 398 181 252 207 97 86 85 74 134 147 186 82 145 222 368 hypothetical protein (AHRD V3.3 *-* AT2G31130.6) AT2G31130 Solyc07g053330.2 0 0 1 2 0 3 4 3 0 5 0 2 6 1 0 Protein trichome birefringence (AHRD V3.3 *** A0A1J3I8M9_NOCCA) Solyc07g053340.2 5 5 0 1 0 3 0 0 1 0 0 0 9 0 0 F-box protein At3g07870-like (AHRD V3.3 --* XP_026400690.1) Solyc07g053350.4 51 121 65 168 38 36 40 37 96 108 90 55 155 114 184 Protein trichome birefringence-like 40 (AHRD V3.3 *** A0A1U8FLM2_CAPAN) AT2G42570 Solyc07g053360.4 4107 579 153 56 6 1 3 2 101 546 105 281 171 784 1672 Late embryogenesis abundant protein (AHRD V3.3 *-* A0A200QFG9_9MAGN) AT2G42560 Solyc07g053370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CLAVATA3/ESR-RELATED 5 (AHRD V3.3 --* AT2G31083.2) AT2G31083 Solyc07g150144.1 3 16 24 13 0 9 8 2 7 10 20 13 16 10 4 Unknown protein Solyc07g053380.2 47 40 39 28 27 45 41 28 33 28 49 15 30 36 33 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PYA7_9MAGN) AT3G58590 Solyc07g053390.1 2 9 8 18 30 26 22 17 13 6 2 13 0 22 10 Unknown protein Solyc07g053400.1 0 18 20 13 19 27 24 22 27 6 19 25 8 23 0 Unknown protein Solyc07g053410.4 82 39 24 47 24 21 21 7 15 27 15 7 35 41 43 TCP transcription factor 10 Solyc07g053420.4 9 5 1 3 2 2 0 0 11 3 1 2 10 12 1 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LDD8_ARTAN) AT2G42360 Solyc07g053430.4 879 1621 1725 1560 2595 2745 2753 2547 1471 1494 1817 1929 1255 1183 1486 Unknown protein Solyc07g053440.4 1836 2085 1208 1362 1725 1578 1491 2164 2069 1754 1128 1893 1554 1689 1196 hypothetical protein (AHRD V3.3 *-* AT3G58110.2) AT3G58110 Solyc07g053450.4 41 86 133 73 180 209 236 193 116 32 112 114 38 43 72 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** A0A1P8B300_ARATH) Solyc07g053460.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine protease (AHRD V3.3 *** A0A2U1Q178_ARTAN) AT1G06260 Solyc07g053470.4 1079 1402 1370 915 718 799 908 899 982 939 959 1081 1817 1370 1078 GTP-binding protein TypA (AHRD V3.3 *** A0A2K3NQQ4_TRIPR) AT2G31060 Solyc07g053480.4 149 792 861 668 944 1130 1049 916 572 375 839 576 626 658 536 Ras-related protein, expressed (AHRD V3.3 *** D8L9F8_WHEAT) AT5G60860 Solyc07g053490.3 329 292 361 333 383 401 433 303 299 270 306 282 284 291 357 OPA3-like protein (AHRD V3.3 *** A0A2I4G3K5_9ROSI) Solyc07g053493.1 42 20 29 13 29 10 23 19 19 12 22 14 10 24 24 Cytochrome (AHRD V3.3 *** A0A2G2W2C1_CAPBA) Solyc07g053497.1 40 46 68 59 38 41 43 25 19 26 51 45 57 60 65 Unknown protein Solyc07g053520.2 82 45 40 40 50 25 37 40 37 37 26 50 30 32 55 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0VKC8_9ASPA) Solyc07g150145.1 15230 10770 9860 12115 10403 10533 10492 9562 7563 9712 10414 9447 9977 9585 12946 proteophosphoglycan-like protein (AHRD V3.3 -** AT3G54680.1) AT3G54680 Solyc07g053530.1 11 29 11 44 8 8 6 5 3 12 0 14 17 1 326 Fasciclin-like arabinogalactan protein 9 (AHRD V3.3 *** A0A1U8HBV4_CAPAN) AT1G03870 Solyc07g053540.1 58 158 129 123 75 71 51 95 111 131 143 121 133 58 127 Fasciclin-like arabinogalactan protein 9 (AHRD V3.3 *** A0A1U8HBV4_CAPAN) AT1G03870 Solyc07g053550.3 473 447 356 171 76 67 67 50 120 599 400 156 963 307 251 Glutaredoxin-C9 (AHRD V3.3 *** A0A2G2WE57_CAPBA) AT1G28480 Solyc07g053560.3 168 195 143 184 227 206 197 199 198 190 184 172 171 196 154 phosphorelay protein (AHRD V3.3 *-* AT5G44150.1) AT5G44150 Solyc07g053570.4 195 221 133 275 195 163 183 182 146 186 203 105 156 122 276 Zinc finger protein MAGPIE (AHRD V3.3 *** A0A2G2Z473_CAPAN) AT1G03840 Solyc07g053580.3 770 441 339 379 330 392 330 261 380 449 402 376 303 396 465 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (AHRD V3.3 *** B6UDN2_MAIZE) AT5G44170 Solyc07g053590.4 7 27 79 79 30 54 57 19 16 36 60 34 13 47 62 NAC domain (AHRD V3.3 *** A0A200QKZ2_9MAGN) AT4G28500 Solyc07g053600.3 730 588 663 618 646 656 592 748 708 624 630 702 765 613 588 receptor-like protein kinase HSL1 (AHRD V3.3 *** A0A1U8HI37_CAPAN) Solyc07g053610.3 2669 1909 2006 2022 1924 2236 2292 2060 2596 2219 2023 2079 1752 2278 2542 Homeobox domain-containing protein/DDT domain-containing protein (AHRD V3.3 *** A0A1Q3C1K9_CEPFO) AT5G44180 Solyc07g053615.1 1030 779 521 514 573 590 501 481 555 561 557 597 982 667 512 DnaJ like protein (AHRD V3.3 *** Q9FEW7_SOLLC) Solyc07g053630.4 809 1005 156 1138 211 318 283 254 512 652 274 322 755 264 402 Two-component response regulator (AHRD V3.3 *-* A0A0D3F1L6_9ORYZ) AT2G20570 Solyc07g053640.1 395 1229 607 1156 722 589 493 765 1332 661 665 720 1582 1720 2446 Arabinogalactan-protein (AHRD V3.3 *-* Q41256_NICAL) Solyc07g053650.4 4465 5933 5001 5588 6147 6678 6829 7264 5811 5268 4174 5484 5676 6001 4356 26S proteasome non-ATPase regulatory subunit 2 homolog (AHRD V3.3 *** A0A2G2Z400_CAPAN) AT2G20580 Solyc07g053660.3 1736 1565 1048 896 951 959 853 949 1031 987 866 1130 1945 1498 1276 WD40 repeat (AHRD V3.3 *** A0A200R1Q4_9MAGN) AT4G28450 Solyc07g053670.3 595 1024 1007 831 855 952 864 931 596 596 650 751 1094 933 732 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial (AHRD V3.3 *** A0A2G2WE69_CAPBA) Solyc07g053680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein (AHRD V3.3 *** A0A2U1M7X2_ARTAN) Solyc07g053690.3 2268 1821 2411 1856 1880 2078 2043 1653 1327 1404 2040 1423 2492 1795 2433 Nucleic acid-binding, OB-fold (AHRD V3.3 *** A0A2U1KRH4_ARTAN) AT2G33845 Solyc07g053700.4 35 575 351 537 894 779 770 913 579 356 463 550 51 252 315 Reticulon-like protein (AHRD V3.3 *** A0A2G2V8C1_CAPBA) AT2G20590 Solyc07g053710.3 689 587 639 672 599 530 566 535 938 797 894 802 735 710 765 Tyrosine aminotransferase (AHRD V3.3 *** A0A2G2V8D6_CAPBA) Solyc07g053720.3 745 594 478 551 268 277 273 346 671 980 661 456 778 562 710 Tyrosine aminotransferase (AHRD V3.3 *** A0A2G2V8D6_CAPBA) AT5G36160 Solyc07g053730.4 770 1247 889 671 840 844 775 838 863 571 611 678 1058 1060 882 Nucleolar GTP-binding protein 1 (AHRD V3.3 *** A0A1U8EKU8_CAPAN) AT1G50920 Solyc07g053735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g053740.1 4272 2206 3342 1419 570 493 485 533 1633 1899 4989 2412 2140 1429 3618 Ethylene Response Factor F.4 AT3G15210 Solyc07g053750.1 66 14 16 47 16 22 15 24 13 12 16 6 25 104 71 Zinc finger transcription factor 50 AT1G03790 Solyc07g053760.4 277 332 558 336 65 113 94 77 312 384 720 153 260 235 456 Protein phosphatase 2C (AHRD V3.3 *** Q6QLU0_SOLLC) Solyc07g053770.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 integrin beta-1-like isoform X3 (AHRD V3.3 --* XP_022547201.1) Solyc07g053780.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g053790.2 250 848 864 1420 2189 2463 2399 2492 1246 719 1133 1588 167 638 695 Protein TPX2 (AHRD V3.3 *** A0A2G2Z491_CAPAN) AT1G03780 Solyc07g053800.3 614 675 722 569 919 852 962 919 883 739 742 753 927 802 636 RING 1B (AHRD V3.3 *** F4I2H5_ARATH) AT1G03770 Solyc07g053810.3 21 6 109 18 133 98 155 125 54 39 234 147 43 14 45 Squamosa promoter binding protein 4 Solyc07g053820.3 126 500 450 557 907 939 1015 1058 497 343 464 728 149 375 279 Mitotic checkpoint serine/threonine-protein kinase BUB1 (AHRD V3.3 *** A0A1U8HBH8_CAPAN) AT2G20635 Solyc07g053830.3 1723 1729 1105 1064 1016 1161 1033 1458 1303 1892 733 1511 2338 1963 1186 ADP,ATP carrier protein, mitochondrial (AHRD V3.3 *** A0A2G2WE05_CAPBA) AT4G28390 Solyc07g053840.1 9 2 0 2 0 0 8 0 7 3 3 6 0 2 1 Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A2U1P4T2_ARTAN) AT4G28380 Solyc07g053850.3 451 314 456 382 377 429 455 401 370 443 435 424 328 328 330 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L742_ARTAN) AT4G28370 Solyc07g053860.3 587 374 458 305 397 387 356 396 361 361 434 409 342 392 288 RNA polymerase II subunit 5-mediating protein homolog isoform X2 (AHRD V3.3 *-* A0A2I4FJS5_9ROSI) AT1G03760 Solyc07g053870.4 634 469 453 411 617 459 397 506 493 515 401 512 433 514 472 Switch 2 (AHRD V3.3 *** A0A1U8HBI7_CAPAN) AT1G03750 Solyc07g053880.3 23 50 46 29 22 29 40 14 17 36 16 22 40 27 11 Early nodulin-like protein 2-like (AHRD V3.3 *-* A0A2K3PIH1_TRIPR) Solyc07g053890.3 194 94 36 87 0 0 0 0 40 30 77 24 64 159 618 O-acyltransferase WSD1-like protein (AHRD V3.3 *** A0A2K3N315_TRIPR) Solyc07g053900.2 0 2 1 0 0 0 1 0 2 0 0 7 1 3 0 DUF506 domain-containing protein (AHRD V3.3 *** A0A1Q3CKJ0_CEPFO) Solyc07g053910.3 1004 570 689 488 311 377 380 346 574 803 666 363 567 593 747 Protein kinase domain (AHRD V3.3 *** A0A200QBC6_9MAGN) Solyc07g053920.3 179 588 457 662 792 615 587 575 657 493 392 424 467 510 774 Mannan endo-1,4-beta-mannosidase (AHRD V3.3 *** A0A2K3MXH2_TRIPR) AT2G20680 Solyc07g053930.1 57 16 22 34 26 33 13 14 12 22 37 11 22 29 51 Pyrroline-5-carboxylate reductase (AHRD V3.3 *** Q9SY38_ARATH) AT4G03600 Solyc07g053940.1 2 6 8 11 6 15 6 11 5 6 3 2 8 10 8 Transmembrane protein (AHRD V3.3 *** A0A1P8API0_ARATH) AT1G53035 Solyc07g053950.1 41 642 740 458 764 809 815 779 817 237 414 707 336 601 158 microtubule-associated protein (AHRD V3.3 *** AT4G28310.1) Solyc07g053960.3 894 623 787 805 400 382 443 312 655 724 766 708 1094 804 748 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QWS6_9MAGN) Solyc07g053970.3 2696 2317 2180 2511 2186 2033 1980 2123 2890 3071 2063 2490 2685 2273 2915 Two pore calcium channel protein 1 (AHRD V3.3 *** A0A1U8HHX4_CAPAN) AT4G03560 Solyc07g053980.3 1250 1400 1868 1388 1036 1361 1361 1292 1472 1439 1356 1474 1114 1433 1302 Callose synthase 12 (AHRD V3.3 *** A0A1U8HBE5_CAPAN) AT4G03550 Solyc07g053990.4 5138 4437 3651 4828 4504 3415 3414 4657 4839 6223 4282 4763 5562 4559 4787 DUF1421 domain-containing protein (AHRD V3.3 *** A0A1Q3BQX3_CEPFO) AT4G28300 Solyc07g054000.3 49 18 28 25 17 33 27 19 22 21 28 20 3 13 31 Unknown protein Solyc07g054010.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g054020.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g054030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g054040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g054050.3 9 3 1 9 6 2 6 0 12 5 16 2 6 5 2 Unknown protein Solyc07g054060.3 93 77 66 56 52 60 43 28 63 73 86 61 58 60 30 hypothetical protein (AHRD V3.3 --* AT4G28290.2) Solyc07g054070.4 151 206 229 250 288 335 306 229 173 173 232 191 190 256 378 DTW domain-containing protein (AHRD V3.3 *** A0A2U1N2D0_ARTAN) AT1G03687 Solyc07g054080.3 1089 448 369 438 212 208 217 193 264 748 464 297 393 331 553 E3 ubiquitin-protein ligase RMA1H1 (AHRD V3.3 *** A0A2G2WDK5_CAPBA) AT4G03510 Solyc07g054090.3 350 289 210 202 229 239 201 249 231 191 206 200 280 261 234 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QWZ8_9MAGN) AT2G20710 Solyc07g054100.3 49 101 161 131 172 170 163 129 159 42 196 121 95 151 116 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QWW0_9MAGN) AT2G20710 Solyc07g054110.2 8 32 47 22 38 32 30 22 26 31 14 43 24 48 25 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200QWZ8_9MAGN) Solyc07g054120.2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 leucine-rich repeat receptor protein kinase EMS1-like (AHRD V3.3 *** A0A1U8F870_CAPAN) Solyc07g054130.2 0 7 0 0 1 3 1 5 0 0 0 0 0 0 0 Unknown protein Solyc07g054140.3 39 36 104 49 54 51 52 59 84 47 83 46 51 27 52 Syntaxin (AHRD V3.3 *** A0A2G3C0S2_CAPCH) AT5G05760 Solyc07g054160.3 896 357 379 399 236 235 262 253 343 480 354 416 325 442 474 Tetraspanin-19 (AHRD V3.3 *** A0A2G2Z3N4_CAPAN) AT2G20740 Solyc07g054170.3 27 285 125 327 717 652 522 745 441 191 284 592 130 349 197 Expansin-B1 (AHRD V3.3 *** A0A1U8HBL3_CAPAN) AT4G28250 Solyc07g054180.4 0 32 32 55 63 96 72 66 77 17 36 25 14 31 14 Clathrin light chain (AHRD V3.3 *** A0A2G3C0T2_CAPCH) AT2G20760 Solyc07g054190.4 481 745 630 651 1039 845 707 958 812 766 553 972 683 811 534 Riboflavin synthase (AHRD V3.3 *** A0A2G3C0R1_CAPCH) AT2G20690 Solyc07g054200.4 828 898 970 842 790 809 747 943 1100 803 739 903 978 1084 779 Pre-mRNA splicing factor (AHRD V3.3 *-* E5GCN8_CUCME) AT4G03430 Solyc07g054205.1 6 7 13 25 22 21 12 11 8 1 4 12 10 8 2 Unknown protein Solyc07g054210.3 724 1606 1167 1316 2268 2114 2385 2407 1881 1437 1187 1922 1202 1313 1426 light dependent NADH:protochlorophyllide oxidoreductase 2 Solyc07g054220.1 179 78 185 65 58 43 34 26 63 70 222 136 115 88 320 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3C0R2_CAPCH) AT4G28140 Solyc07g054240.2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* F4HUX0_ARATH) Solyc07g054250.2 0 0 1 0 0 0 0 3 0 0 0 0 0 0 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9SLI0_ARATH) Solyc07g054260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NDR1/HIN1-like protein 6 (AHRD V3.3 *-* XP_019070290.1) Solyc07g054265.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g054270.3 1411 736 1007 899 687 749 771 604 930 2147 1285 1344 635 859 1390 DUF789 domain-containing protein (AHRD V3.3 *** A0A1Q3CP56_CEPFO) AT4G03420 Solyc07g054280.1 72 32 85 125 15 42 42 17 127 101 212 115 59 68 15 Tyrosine/DOPA decarboxylase 3 (AHRD V3.3 *** A0A2G2Z3G9_CAPAN) Solyc07g054290.1 234 505 317 679 705 618 848 609 456 699 378 407 381 350 440 Photosystem II Psb27 protein (AHRD V3.3 *-* A0A1Y1IAK8_KLENI) AT1G03600 Solyc07g054300.3 964 1081 1928 1190 1599 1673 1510 1517 1386 1135 1475 1558 1592 1622 1169 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1PMG8_ARTAN) AT4G03415 Solyc07g054310.3 626 379 1634 1650 78 105 79 87 717 1516 1728 1455 1046 946 608 Cell wall protein (AHRD V3.3 *** I6QN83_HELAN) AT2G20870 Solyc07g150146.1 18 50 54 72 108 92 80 34 32 15 86 54 55 74 50 Unknown protein Solyc07g054320.3 295 313 357 268 320 364 306 363 327 275 270 383 331 307 346 Protein LAZ1 (AHRD V3.3 *** A0A2G2Z3N7_CAPAN) AT4G38360 Solyc07g054330.4 320 193 220 276 193 216 235 139 131 115 137 167 170 207 169 FBD-associated F-box protein (AHRD V3.3 *** A0A1J3JQY5_NOCCA) Solyc07g054340.1 58 46 34 33 6 9 10 12 28 48 32 15 27 35 51 FBD-associated F-box protein At2g26860-like (AHRD V3.3 *-* XP_010323726.1) Solyc07g054370.3 858 538 597 635 251 274 298 206 254 238 626 202 486 639 1011 F-box family protein (AHRD V3.3 *** I0J3I6_ARAHH) Solyc07g054380.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HAT14 (AHRD V3.3 *** A0A2G2WE10_CAPBA) Solyc07g054390.1 2 2 0 2 1 1 0 0 0 0 0 1 3 2 0 QWRF motif protein (DUF566) (AHRD V3.3 *-* A0A1P8B132_ARATH) AT2G20815 Solyc07g054400.3 46 83 121 79 106 142 92 108 90 71 90 83 77 145 71 Centromere protein S (AHRD V3.3 *** A0A1J3FK69_NOCCA) AT5G50930 Solyc07g054410.1 1 0 0 4 0 0 0 0 7 1 1 9 1 4 0 Sugar isomerase (SIS) family protein (AHRD V3.3 *-* A0A2U1LTS1_ARTAN) Solyc07g054420.2 70 109 94 143 137 179 193 164 113 116 136 149 91 141 146 folic acid binding / transferase (AHRD V3.3 *** AT2G20830.4) AT2G20830 Solyc07g054430.3 517 190 303 264 373 407 399 317 644 1652 842 1080 272 428 455 folic acid binding / transferase (AHRD V3.3 *** AT2G20830.4) Solyc07g054440.3 778 527 576 795 640 639 703 562 449 610 629 519 525 520 601 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) AT1G03520 Solyc07g054445.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g054450.4 66 191 212 266 292 316 237 305 141 128 199 178 235 189 224 protein ULTRAPETALA 1-like (AHRD V3.3 *** A0A2I4DNL4_9ROSI) AT2G20825 Solyc07g054460.4 1904 2129 1431 1172 753 802 804 898 1117 966 928 1245 3006 2381 1758 H/ACA ribonucleoprotein complex non-core subunit NAF1 (AHRD V3.3 *-* A0A2I4DNL3_9ROSI) AT1G03530 Solyc07g054470.1 13 28 93 44 6 17 16 4 15 10 51 16 6 20 43 hypothetical protein (AHRD V3.3 *** AT1G52855.1) AT1G52855 Solyc07g054475.1 69 52 137 108 53 64 100 49 59 63 94 46 55 72 71 Long chain acyl-CoA synthetase 1 (AHRD V3.3 *-* A0A2G2XR18_CAPBA) Solyc07g054480.3 255 232 157 204 224 186 199 189 231 211 150 231 147 281 204 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WDI9_CAPBA) AT1G73710 Solyc07g054490.3 272 823 677 577 1341 1157 1240 1276 619 610 668 687 479 541 527 Secretory carrier-associated membrane protein (AHRD V3.3 *** A0A2G2Z3L9_CAPAN) AT2G20840 Solyc07g054500.4 2347 1931 2834 2689 2366 2560 2922 2636 2002 3201 2714 1861 2620 2153 1673 Protein STRUBBELIG-RECEPTOR FAMILY 3 (AHRD V3.3 *** A0A2G2Z3Z3_CAPAN) AT4G03390 Solyc07g054540.4 1266 698 617 874 585 522 650 786 692 1131 643 734 667 793 573 Lipoyl synthase, mitochondrial (AHRD V3.3 *** A0A2G2WDJ9_CAPBA) AT2G20860 Solyc07g054550.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc07g054560.1 230 987 1187 984 2005 1342 1199 1674 1167 609 680 1432 894 819 550 hypothetical protein (AHRD V3.3 --* AT1G61170.1) AT4G28180 Solyc07g054570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat plant protein, putative (AHRD V3.3 *** G7INY3_MEDTR) Solyc07g054580.3 135 58 106 117 34 39 20 24 44 49 65 47 64 90 125 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1MRW5_ARTAN) AT4G03400 Solyc07g054590.1 0 0 7 0 0 0 0 0 1 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A1J3ESH1_NOCCA) Solyc07g054600.3 351 341 216 232 120 114 107 106 154 204 144 152 423 232 192 F-box protein (AHRD V3.3 *-* A0A1J3J8H1_NOCCA) Solyc07g054610.3 62 50 83 45 25 35 31 26 35 33 34 34 67 67 99 F-box protein (AHRD V3.3 *-* A0A1J3J8H1_NOCCA) Solyc07g054620.4 132 157 105 198 125 106 87 106 129 127 80 129 192 155 109 F-box domain (AHRD V3.3 *-* A0A200QBF0_9MAGN) Solyc07g054630.4 395 371 414 331 320 333 269 343 303 301 279 376 368 309 364 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3CXA6_CEPFO) AT3G18990 Solyc07g054635.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 6 SCR-like 11 (AHRD V3.3 -** AT4G15733.1) Solyc07g054640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial (AHRD V3.3 *** A0A2G2Z3N6_CAPAN) AT4G28220 Solyc07g054650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein, putative (AHRD V3.3 *** A0A061GQ62_THECC) AT2G23945 Solyc07g054670.4 5 12 14 2 0 6 2 5 2 7 0 8 2 6 0 External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial (AHRD V3.3 *** A0A2G2Z3L2_CAPAN) Solyc07g054680.3 491 293 334 304 238 272 298 270 273 250 264 281 275 368 227 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PVF9_9MAGN) AT1G11900 Solyc07g054690.1 39 568 305 444 1140 1158 1014 1314 554 196 410 547 67 281 219 hypothetical protein (AHRD V3.3 *** AT4G28230.1) AT4G28230 Solyc07g054700.3 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidoglycan-binding lysin domain-containing protein (AHRD V3.3 *-* A0A2U1KJ84_ARTAN) Solyc07g054710.2 18 0 13 0 1 5 0 1 0 0 0 0 0 0 0 Peptidoglycan-binding lysin domain (AHRD V3.3 *** A0A200QC57_9MAGN) Solyc07g054720.2 1 0 0 2 0 0 0 0 9 1 0 2 1 1 0 Proteinase inhibitor type-2 (AHRD V3.3 *-* A0A2G3A0T9_CAPAN) AT1G72060 Solyc07g054730.1 6739 1961 1485 1609 529 342 747 545 1516 4487 1766 1285 1656 1437 2621 Wound-responsive family protein (AHRD V3.3 *** AT4G28240.1) AT4G28240 Solyc07g054740.3 177 217 341 372 233 252 231 268 292 288 276 287 190 262 282 Vesicle-associated protein 4-2 (AHRD V3.3 *** A0A2G3C0K4_CAPCH) Solyc07g054750.1 9 7 3 7 6 0 7 0 1 10 30 17 15 1 5 Wound-responsive family protein (AHRD V3.3 *-* A0A2U1LJB1_ARTAN) AT4G10270 Solyc07g054760.1 211 86 367 82 167 77 95 71 57 90 290 44 171 112 89 Wound-responsive family protein (AHRD V3.3 *** A0A2K3L288_TRIPR) AT4G10270 Solyc07g054770.1 137 115 220 65 56 43 52 40 107 116 457 99 80 78 206 Wound-responsive family protein (AHRD V3.3 *** A0A2K3L288_TRIPR) AT4G10270 Solyc07g054780.1 29 26 153 2 53 30 54 43 35 90 226 53 36 33 41 Wound induced protein (AHRD V3.3 *** Q04129_SOLLC) AT4G10270 Solyc07g054790.1 2 4 42 7 2 7 8 2 4 14 64 6 3 13 1 Wound-responsive family protein (AHRD V3.3 *** A0A2K3L288_TRIPR) AT4G10270 Solyc07g054800.1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 Wound induced protein (AHRD V3.3 *** Q04129_SOLLC) AT4G10270 Solyc07g054810.1 68 57 83 55 75 40 30 39 38 44 32 29 41 42 43 Unknown protein Solyc07g054820.4 1456 1809 1213 1662 2054 1931 1945 2289 1607 1579 1174 1734 1232 1257 1188 Protein THYLAKOID FORMATION1, chloroplastic (AHRD V3.3 *** THF1_SOLTU) AT2G20890 Solyc07g054830.4 656 480 749 511 207 246 217 230 403 730 406 235 760 537 479 diacylglycerol kinase AT2G20900 Solyc07g054840.4 2 1 0 0 0 0 0 0 3 0 0 2 0 0 0 R2R3MYB transcription factor 41 Solyc07g054850.3 2195 4092 3315 4103 7709 7388 7113 7364 4577 3049 4128 5331 4305 4048 3636 transmembrane protein (AHRD V3.3 *** AT4G28100.1) AT4G28100 Solyc07g054860.1 1 0 0 0 0 0 0 0 1 0 0 0 0 2 0 Tyrosine/DOPA decarboxylase 3 (AHRD V3.3 *** A0A2G2Z3G9_CAPAN) Solyc07g054870.4 0 1 1 0 2 0 0 0 4 1 1 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MCV6_ARTAN) Solyc07g054880.4 10 11 6 18 3 9 6 4 18 12 57 15 6 11 10 Methylketone synthase Ie (AHRD V3.3 *** E0YCS7_SOLLC) Solyc07g054890.1 2 0 0 0 0 0 0 0 0 1 0 0 0 0 1 Unknown protein Solyc07g054900.2 140 67 216 146 22 20 39 13 61 109 313 95 96 186 135 Methylketone synthase Id (AHRD V3.3 *** E0YCS6_SOLLC) Solyc07g054920.2 4 2 2 7 7 4 4 18 1 13 2 4 3 3 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MCV6_ARTAN) Solyc07g054910.3 4 0 6 3 0 1 0 0 0 2 0 0 3 0 0 Methyl jasmonate esterase (AHRD V3.3 *-* Q56SE1_SOLTU) Solyc07g054930.3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MCV6_ARTAN) Solyc07g054940.2 5 5 7 7 15 14 15 13 20 6 12 20 8 9 5 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MCV6_ARTAN) Solyc07g054950.2 212 225 427 277 198 162 170 178 157 237 178 221 211 156 77 cyclinD6_1 AT4G03270 Solyc07g054960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 66 Solyc07g054970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 filament-like plant protein 4 (AHRD V3.3 --* XP_010320420.1) Solyc07g054980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 85 Solyc07g055000.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 R2R3MYB transcription factor 72 Solyc07g055010.3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 heavy metal-associated isoprenylated plant protein 26 (AHRD V3.3 *** A0A1U7YA53_NICSY) AT1G06330 Solyc07g055020.3 394 188 192 250 165 112 197 196 225 261 206 236 151 192 162 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) Solyc07g055030.1 123 232 288 208 316 348 241 284 267 147 207 253 299 281 278 Mitochondrial 37S ribosomal protein S27 (AHRD V3.3 *** A0A1J3J9M8_NOCCA) AT5G44710 Solyc07g055040.1 24 14 27 15 29 26 27 30 19 17 22 18 21 9 21 Agenet-like domain-containing protein (AHRD V3.3 *** A0A103YGJ9_CYNCS) Solyc07g055050.3 772 1384 1938 1520 1129 1120 1290 1316 2433 1700 2064 2549 1259 1700 1864 ATP synthase protein I-related protein (AHRD V3.3 *** A0A2U1Q771_ARTAN) AT2G31040 Solyc07g055060.3 6346 6442 3712 7675 4628 4607 4312 5660 8045 8846 4136 5300 16155 5997 5676 Phosphoenolpyruvate carboxylase (AHRD V3.3 *** A6YM34_RICCO) AT1G53310 Solyc07g150147.1 37 236 111 106 419 392 481 313 150 167 193 128 250 159 272 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 (AHRD V3.3 *** A0A2G3C166_CAPCH) AT2G42610 Solyc07g055080.3 86 282 228 228 247 220 264 273 352 199 184 243 329 256 225 Proteasome subunit alpha type (AHRD V3.3 *** A0A1U8HBV3_CAPAN) AT1G16470 Solyc07g055090.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger A20 and AN1 domain stress-associated protein (AHRD V3.3 *** A0A2K3NFU1_TRIPR) AT4G25380 Solyc07g055100.4 334 281 201 222 345 280 329 443 271 311 304 366 294 235 184 Trihelix transcription factor ASIL1 (AHRD V3.3 *** A0A2G2WEG4_CAPBA) AT3G58630 Solyc07g055110.3 27 90 159 149 232 231 218 259 139 109 140 178 44 76 59 hypothetical protein (AHRD V3.3 *** AT5G12360.2) AT5G12360 Solyc07g055120.4 1763 954 231 560 545 495 444 509 384 1169 413 633 460 555 512 F-box protein MAX2 (AHRD V3.3 *** A0A1U8HC06_CAPAN) AT2G42620 Solyc07g055130.4 541 664 625 609 626 577 693 545 699 663 608 577 666 709 534 MAP kinase kinase kinase 57 AT3G58640 Solyc07g055140.3 120 129 209 101 136 148 160 115 314 183 224 156 143 146 235 DUF688 domain-containing protein (AHRD V3.3 *** A0A1Q3CVC4_CEPFO) AT2G30990 Solyc07g055150.3 481 503 564 599 458 576 553 484 397 469 658 531 553 579 583 Plant cysteine oxidase (AHRD V3.3 *** A0A2R6QX59_ACTCH) AT2G42670 Solyc07g055160.4 251 394 362 451 533 578 604 664 571 432 391 433 336 363 385 phospholipase A1-IIdelta-like (AHRD V3.3 *** A0A2I4E0K6_9ROSI) AT2G42690 Solyc07g055170.1 99 193 147 288 173 129 150 198 86 177 119 190 182 226 50 DNA repair protein XRCC3-like protein (AHRD V3.3 *** A0A2G2WEA0_CAPBA) AT5G57450 Solyc07g055180.3 905 2158 3734 3162 5257 6175 5148 4985 2281 2172 2994 4216 2260 2891 1744 Protein kinase superfamily protein (AHRD V3.3 *** F4J5Y7_ARATH) AT3G58690 Solyc07g055190.3 55 32 43 33 18 19 27 16 9 48 37 28 22 30 27 Peroxidase (AHRD V3.3 *** K4CG58_SOLLC) Solyc07g055200.4 4735 3062 2518 2928 2798 2649 2726 3013 2727 3482 2740 2807 2759 2622 2981 SlSK AT2G30980 Solyc07g055210.3 819 1531 1575 1433 1371 1248 1197 1287 1263 1125 1263 939 1901 1602 1486 Aspartate aminotransferase (AHRD V3.3 *** A0A2G2WE83_CAPBA) AT2G30970 Solyc07g055215.1 3 10 16 3 11 15 5 1 6 4 7 9 2 5 13 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* B6SN54_MAIZE) Solyc07g150148.1 50 65 60 85 28 85 72 33 72 35 63 53 34 81 66 Unknown protein Solyc07g055220.3 19 49 12 42 41 46 46 26 48 30 57 58 25 58 36 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1P3Q8_ARTAN) AT5G46680 Solyc07g055230.4 818 1883 1636 1078 1621 1660 1573 1568 1054 933 1185 1198 2061 1795 1210 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) AT3G58700 Solyc07g055240.1 16 14 12 5 16 11 14 17 16 5 20 11 19 11 16 ovate family protein 15 Solyc07g055250.3 895 1005 885 804 911 927 851 894 647 580 761 756 1496 1057 804 Peptidoglycan-binding lysin domain (AHRD V3.3 *** A0A200PMR3_9MAGN) Solyc07g055260.3 423 248 108 222 312 274 227 258 294 340 159 197 223 91 120 Chaperone protein dnaJ (AHRD V3.3 *** A0A2K3MMT7_TRIPR) AT2G42750 Solyc07g055270.1 131 269 166 298 262 191 186 207 129 132 82 137 164 173 89 DUF1685 family protein (AHRD V3.3 *** AT2G42760.1) AT2G42760 Solyc07g055280.4 651 438 365 887 361 300 385 351 270 980 554 564 407 478 318 WRKY transcription factor 78 AT3G58710 Solyc07g055290.3 421 333 369 341 366 343 301 238 300 299 345 227 352 334 354 LES245570 Rab11 GTPase AT1G06400 Solyc07g055300.3 912 991 927 974 914 1268 1027 985 990 922 886 828 1043 816 841 Trehalose-6-phosphate synthase (AHRD V3.3 *** E5GC29_CUCME) AT1G06410 Solyc07g055310.1 53 111 103 109 97 126 126 80 116 68 95 116 193 147 146 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2Z4F2_CAPAN) AT2G41080 Solyc07g055320.4 4656 3301 2095 2414 2727 2484 2777 2589 3154 3073 2029 2523 2247 1942 2604 ATP-dependent zinc metalloprotease ftsh chloroplastic-like (AHRD V3.3 *** A0A2K3N4C5_TRIPR) AT2G30950 Solyc07g055330.3 174 261 418 281 312 212 195 151 171 209 434 123 233 237 400 RING/U-box superfamily protein (AHRD V3.3 *-* F4J5Z1_ARATH) AT3G58720 Solyc07g055340.3 246 405 385 480 503 568 599 430 328 317 377 300 382 405 278 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *** A0A2U1LGT5_ARTAN) AT2G42770 Solyc07g055350.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G2WEH0_CAPBA) AT3G14690 Solyc07g055360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G2WEG1_CAPBA) Solyc07g055570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* Q9LLN5_ORYSA) Solyc07g055573.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G2W4T7_CAPBA) Solyc07g055577.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) Solyc07g055380.1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3NQB9_TRIPR) Solyc07g055390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* A0A2U1MH42_ARTAN) Solyc07g055400.2 50 25 37 28 3 29 15 22 33 28 53 23 52 24 6 Lectin-domain receptor-like kinase (AHRD V3.3 *-* G4XXY5_NICAT) Solyc07g055410.2 21 13 6 8 2 12 4 5 21 4 16 4 5 14 0 Receptor-like protein kinase (AHRD V3.3 *-* Q9LLN5_ORYSA) Solyc07g055415.1 46 20 13 26 1 8 7 4 23 48 27 11 23 21 2 Lectin-domain receptor-like kinase (AHRD V3.3 *-* G4XXY5_NICAT) Solyc07g055420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* Q9LLN5_ORYSA) Solyc07g055430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pkinase domain-containing protein/B_lectin domain-containing protein (AHRD V3.3 *-* A0A1Q3C295_CEPFO) Solyc07g055440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G2Z422_CAPAN) AT3G14690 Solyc07g055450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G2Z422_CAPAN) AT3G14690 Solyc07g055460.3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G2WEL3_CAPBA) Solyc07g055470.3 487 230 140 297 0 5 1 3 42 26 25 10 236 259 578 Cytochrome (AHRD V3.3 *** A0A2G2Z447_CAPAN) AT3G14690 Solyc07g055480.2 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 Cytochrome (AHRD V3.3 *** A0A2G2Z422_CAPAN) AT3G14690 Solyc07g055490.4 80 40 16 114 1 6 6 4 20 8 8 12 27 54 363 Cytochrome (AHRD V3.3 *** A0A2G2Z466_CAPAN) Solyc07g150149.1 4 5 0 7 5 9 3 5 8 8 0 0 3 0 2 Cytochrome (AHRD V3.3 *-* A0A2G3C1H3_CAPCH) Solyc07g055530.3 188 267 318 324 240 265 295 255 402 194 315 314 434 348 302 Cytochrome (AHRD V3.3 *** A0A2G3C1H9_CAPCH) Solyc07g055550.2 14 10 11 46 1 10 30 11 22 5 3 18 5 4 17 Cytochrome (AHRD V3.3 *** A0A2G2WEH0_CAPBA) AT3G14690 Solyc07g055560.4 8 32 3 29 12 4 6 7 10 18 0 5 27 1 17 Cytochrome (AHRD V3.3 *** A0A2G3C1F9_CAPCH) AT3G14690 Solyc07g055580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Apple-like protein (AHRD V3.3 *-* A0A2U1PGN2_ARTAN) Solyc07g055600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g055610.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3PR54_TRIPR) Solyc07g055620.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3NQB9_TRIPR) Solyc07g055630.4 34 29 16 8 0 0 0 0 0 6 4 0 6 5 14 Lectin-domain receptor-like kinase (AHRD V3.3 *-* G4XXY5_NICAT) Solyc07g055640.1 153 61 65 73 0 1 2 2 35 24 65 26 58 95 107 Immunity to Fusarium wilt race 3 Solyc07g055650.2 6 4 8 6 12 5 8 2 4 18 0 3 8 13 0 Receptor-like protein kinase (AHRD V3.3 *-* Q9LLN5_ORYSA) Solyc07g055660.2 180 137 90 97 70 74 69 103 93 156 126 104 146 78 145 glycine-rich protein (AHRD V3.3 *-* AT3G06780.1) AT3G06780 Solyc07g055670.1 90 36 50 23 0 7 7 5 8 61 63 1 118 32 34 Lectin-domain receptor-like kinase (AHRD V3.3 *-* G4XXY5_NICAT) Solyc07g055690.1 14 1 1 1 1 0 0 0 1 9 0 0 4 3 0 Lectin-domain receptor-like kinase (AHRD V3.3 *** G4XXY5_NICAT) Solyc07g055700.2 449 472 447 623 511 538 532 585 552 508 425 466 474 457 407 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2U1QA65_ARTAN) AT1G06470 Solyc07g055710.3 318 156 131 97 16 11 14 10 72 143 97 36 194 171 151 Heat stress transcription factor A-5 (AHRD V3.3 *** A0A2G2Z4R4_CAPAN) Solyc07g055720.4 10 6 48 43 3 7 2 0 46 5 24 24 5 31 136 Heat shock protein, putative (AHRD V3.3 *** Q8LD91_ARATH) AT1G06460 Solyc07g055730.4 0 1 0 4 1 1 0 2 1 0 0 2 0 0 0 Protein trichome birefringence-like 43 (AHRD V3.3 *** A0A2G3C1G9_CAPCH) Solyc07g055740.1 231 527 299 501 412 337 318 311 746 249 399 389 447 468 363 strictosidine synthase Solyc07g055750.4 9 16 32 4 16 26 8 20 16 12 30 20 4 14 20 Strictosidine synthase-like protein (AHRD V3.3 *** A7WPL3_TOBAC) Solyc07g055760.3 41 20 22 17 19 26 14 12 29 16 11 17 8 19 48 Unknown protein Solyc07g055780.3 6 13 10 40 60 37 41 51 17 9 3 36 9 21 0 Protein trichome birefringence-like 43 (AHRD V3.3 *** A0A2G2WDQ2_CAPBA) Solyc07g055790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 43 (AHRD V3.3 *** A0A1U8H7S1_CAPAN) Solyc07g055800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 41 (AHRD V3.3 *** A0A2G2Z4S4_CAPAN) Solyc07g055810.3 964 1009 1475 1037 784 787 776 870 973 1249 1488 705 829 716 679 LRR_1 domain-containing protein/Pkinase_Tyr domain-containing protein/Malectin domain-containing protein/LRR_8 domain-containing protein (AHRD V3.3 *** A0A1Q3C610_CEPFO) AT1G07650 Solyc07g055820.2 0 6 15 9 16 4 1 1 7 3 2 3 5 8 9 Receptor-like protein kinase 2 (AHRD V3.3 *** A0A314YLW7_PRUYE) Solyc07g055830.3 842 718 874 924 599 621 691 715 889 965 1077 770 999 880 1115 Transcription elongation factor B polypeptide (AHRD V3.3 *** F4IP79_ARATH) AT2G42780 Solyc07g055840.3 83 40 9 56 48 36 40 54 52 47 9 51 41 55 58 Citrate synthase (AHRD V3.3 *** A0A2G2WEG9_CAPBA) AT3G58750 Solyc07g055850.4 506 543 536 557 955 532 502 659 627 540 312 584 418 406 417 Ubiquinone biosynthesis O-methyltransferase (AHRD V3.3 *** A0A2U1KIF0_ARTAN) AT2G30920 Solyc07g055860.4 3585 2746 2284 2227 2059 2127 1917 2027 1949 2073 1854 1966 3095 2573 2200 type 5 protein serine/threonine phosphatase 62 kDa isoform AT2G42810 Solyc07g055870.4 60 106 86 124 114 124 132 134 61 44 66 74 97 98 52 MAP kinase kinase kinase 58 Solyc07g055880.1 25 38 35 45 39 56 56 57 32 11 35 55 14 28 31 vitellogenin-2 protein (AHRD V3.3 *-* AT1G31460.1) AT2G41342 Solyc07g055890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g055900.1 170 178 127 235 242 228 223 255 144 146 124 178 146 183 135 ATP-dependent DNA helicase (AHRD V3.3 *** A0A2G2WEN3_CAPBA) Solyc07g055910.4 529 578 857 572 1392 1568 1456 1636 663 677 577 1107 415 678 336 hypothetical protein (AHRD V3.3 *-* AT3G58770.1) AT3G58770 Solyc07g055920.4 101 96 117 108 19 36 21 9 21 69 0 123 8 103 4 Tomato AGAMOUS-like 1 Solyc07g055930.3 2102 771 890 758 226 275 273 225 486 973 1169 269 865 702 1454 Hexosyltransferase (AHRD V3.3 *** A0A2G2WG07_CAPBA) AT3G58790 Solyc07g055940.3 126 75 55 45 80 59 96 84 77 74 77 67 90 85 102 Secretion-regulating guanine nucleotide exchange factor (AHRD V3.3 *** Q9LXS2_ARATH) AT3G58800 Solyc07g055950.3 7303 30088 19952 25389 24342 21520 16463 31626 21583 23816 14900 24537 14744 19419 6148 Protodermal factor 1 (AHRD V3.3 *-* A0A2G2YIY2_CAPAN) Solyc07g055960.3 7 3 8 2 2 4 1 5 3 4 7 0 0 2 9 Unknown protein Solyc07g055970.1 2 3 23 7 1 7 4 5 0 1 0 1 0 4 12 Cytochrome P450 (AHRD V3.3 *** A0A200R878_9MAGN) AT2G42850 Solyc07g055980.3 617 883 1078 1052 1232 1305 1345 971 925 697 1044 856 948 1116 1088 Haloacid dehalogenase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1ND25_ARTAN) AT3G58830 Solyc07g055990.3 0 66 19 0 0 0 0 0 2 0 4 0 0 2 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G3C1I6_CAPCH) Solyc07g056000.2 211 89 590 28 0 2 5 0 21 63 1371 141 111 20 352 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** Q43528_SOLLC) Solyc07g056010.3 901 1561 1460 1303 1470 1616 1470 1468 1417 944 1168 1213 1545 1645 1333 Conserved oligomeric Golgi complex subunit 4 (AHRD V3.3 *** A0A2G2WMR4_CAPBA) AT4G01400 Solyc07g056020.3 1725 2147 1676 1689 2045 2332 2577 2497 2282 1851 1580 1872 1412 1692 1923 Translation initiation factor IF-2 (AHRD V3.3 *** A0A2G2Z4L1_CAPAN) AT1G17220 Solyc07g056030.3 4459 3892 3297 3439 3346 3242 3707 3671 3744 4055 3118 3665 3547 3602 3162 Nuclear-interacting partner of ALK (AHRD V3.3 *** A0A1J3JJC4_NOCCA) AT1G17210 Solyc07g056040.3 679 436 538 523 312 381 266 243 417 600 671 632 368 466 558 CASP-like protein (AHRD V3.3 *** A0A2I4GR32_9ROSI) AT1G17200 Solyc07g056050.1 543 1152 827 902 1263 1067 1158 1319 1113 1020 885 924 1146 1019 865 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G2Z4P1_CAPAN) AT4G12650 Solyc07g056060.4 38 377 423 654 1009 1048 881 1077 557 329 368 556 70 251 299 transmembrane protein (AHRD V3.3 *** AT5G65440.9) AT5G48310 Solyc07g056070.2 320 236 185 196 115 136 146 117 143 150 194 133 226 173 176 Mitochondrial 37S ribosomal protein S27 (AHRD V3.3 *** A0A1J3EW96_NOCCA) AT5G44710 Solyc07g056080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 Unknown protein Solyc07g056090.1 2 0 2 0 0 0 2 0 3 1 0 0 2 0 0 Unknown protein Solyc07g056100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g056110.3 396 195 276 234 180 164 186 182 281 256 319 193 295 240 319 Vacuolar cation/proton exchanger (AHRD V3.3 *** K4CGE4_SOLLC) Solyc07g056120.3 527 348 359 317 322 353 343 237 261 310 433 269 322 303 476 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* A0A1P8AMX8_ARATH) AT1G01150 Solyc07g056130.1 0 0 0 0 0 4 0 0 0 1 2 0 0 0 0 Unknown protein Solyc07g056140.3 1261 3250 2132 2557 4216 3567 3577 4724 4070 3061 1945 3241 2862 2487 1846 ADP-glucose pyrophosphorylase small subunit AT5G48300 Solyc07g056150.4 834 549 582 455 552 389 378 552 610 960 453 495 801 496 507 Rab family GTPase (AHRD V3.3 *** A0A1Y1I8A7_KLENI) Solyc07g056160.4 760 975 1214 1391 724 1003 787 901 640 1036 509 1007 547 949 544 CYP724B2 mRNA for cytochrome P450 Solyc07g056170.4 53 67 96 92 79 82 81 89 71 81 155 76 63 59 36 Subtilisin-like protease (AHRD V3.3 *** A0A2G3C254_CAPCH) AT2G04160 Solyc07g056180.2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 30 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6QEC1_ACTCH) Solyc07g056190.3 172 22 21 14 0 0 1 2 5 2 44 2 16 89 13 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6QEC1_ACTCH) Solyc07g056200.3 681 310 70 37 3 0 1 4 13 148 50 7 2142 585 138 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6QEC1_ACTCH) Solyc07g056210.4 138 82 1 8 0 0 0 0 15 12 17 6 213 240 76 Heavy metal-associated isoprenylated plant protein 47 (AHRD V3.3 *-* A0A2P4MV36_QUESU) Solyc07g056220.3 1570 1282 1425 1375 1511 1650 1645 1674 1368 1545 1549 1272 1242 1373 1496 Protein VACUOLELESS1 (AHRD V3.3 *** A0A2G2WG03_CAPBA) AT2G38020 Solyc07g056230.3 12 170 138 168 389 297 322 249 145 41 149 99 133 139 133 Cytochrome b561 domain-containing protein (AHRD V3.3 *** A0A1J3EQ91_NOCCA) Solyc07g056240.3 456 307 151 311 445 398 398 386 183 359 118 178 329 103 93 myosin-G heavy chain-like protein (AHRD V3.3 *** AT2G42975.1) AT2G42975 Solyc07g056250.3 68 178 408 297 366 322 353 284 201 165 292 169 144 166 235 GDSL esterase/lipase (AHRD V3.3 *** A0A1J3J8D5_NOCCA) AT5G50890 Solyc07g056260.4 2249 1728 2188 2104 1436 1709 1921 1418 1881 1487 1839 1552 1456 2079 1987 Callose synthase 3 (AHRD V3.3 *** A0A1U8HKF3_CAPAN) AT1G06490 Solyc07g056270.3 506 1016 1542 1181 1598 1829 1939 1674 1504 1338 1306 1601 1086 1077 1029 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3P4G5_TRIPR) AT2G42960 Solyc07g056280.3 297 154 91 111 54 38 27 22 115 166 103 129 167 150 269 WRKY transcription factor 30 AT1G29860 Solyc07g056290.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1KXQ2_ARTAN) AT2G33160 Solyc07g056300.1 1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2K3MS42_TRIPR) AT2G42940 Solyc07g056310.3 590 648 556 739 569 618 625 603 689 577 826 624 655 555 559 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* Q1G3P4_ARATH) AT2G30933 Solyc07g056320.4 288 320 260 303 168 244 264 206 251 168 247 232 241 333 352 Glycerol-3-phosphate acyltransferase 1 (AHRD V3.3 *** A0A1U8HC36_CAPAN) AT1G06520 Solyc07g056325.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein%2C putative (DUF239) (AHRD V3.3 --* AT4G15050.1) Solyc07g056330.3 349 733 998 682 1477 1346 1211 1401 631 651 668 935 1040 736 494 Ribose-phosphate pyrophosphokinase (AHRD V3.3 *** A0A2U1NXC0_ARTAN) AT2G42910 Solyc07g056340.4 3913 1996 1539 1793 1847 2124 2186 1821 2235 2540 1499 1953 1343 1699 1952 Protein MEI2-like 5 (AHRD V3.3 *** A0A1U8HKE2_CAPAN) AT1G29400 Solyc07g056350.3 2195 2113 2209 2101 2312 2086 1876 2168 2957 2263 1942 2018 2176 2016 2446 mitogen-activated protein kinase 12 AT2G42880 Solyc07g056360.1 91 82 79 55 102 123 101 78 71 98 146 60 36 51 109 Transcription factor PAR2 (AHRD V3.3 *** A0A1U8H7M7_CAPAN) AT2G42870 Solyc07g056370.3 921 1010 661 610 617 640 636 634 859 520 464 608 1261 1091 932 peroxisomal and mitochondrial division factor 2-like (AHRD V3.3 *-* A0A2I4EX70_9ROSI) AT1G06530 Solyc07g056380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease h protein (AHRD V3.3 *** A0A2U1MRI3_ARTAN) AT1G04625 Solyc07g056390.4 205 233 204 196 248 314 292 296 251 252 367 387 426 335 249 Endoplasmic reticulum oxidoreductin-1 (AHRD V3.3 *** A0A2G2WEL6_CAPBA) AT1G72280 Solyc07g056400.1 1028 843 1329 758 1145 1084 912 1164 978 1053 1810 1479 465 811 866 Serine/threonine-protein kinase WAG2 (AHRD V3.3 *** A0A2G2Z4Q4_CAPAN) AT3G14370 Solyc07g056410.3 241 244 353 382 162 176 134 113 335 181 454 75 197 260 301 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A2U1LDI6_ARTAN) AT1G17230 Solyc07g056420.4 604 777 385 542 508 596 568 547 799 635 252 727 1652 547 612 glutathione S-transferase AY082341 AT1G17180 Solyc07g056430.3 12 12 15 7 3 5 14 12 5 7 11 9 11 30 19 Glutathione S-transferase (AHRD V3.3 *** Q9FQE8_SOYBN) Solyc07g056440.3 53 53 36 21 34 21 20 18 39 63 20 31 107 49 73 Glutathione S-transferase (AHRD V3.3 *** Q9FQE8_SOYBN) AT1G17180 Solyc07g056450.3 1 6 8 1 0 2 0 2 1 3 0 0 4 2 0 Glutathione S-transferase (AHRD V3.3 *** A0A2K3JPI6_TRIPR) Solyc07g056460.3 82 201 250 161 287 264 269 326 194 132 220 254 182 186 151 Glutathione S-transferase-like protein (AHRD V3.3 *** A0A2K3N2T5_TRIPR) AT1G17180 Solyc07g056470.3 97 180 249 229 280 284 189 251 255 456 205 275 1102 238 182 Glutathione S-transferase-like protein (AHRD V3.3 *** A0A2K3N2T5_TRIPR) AT1G17180 Solyc07g056480.3 275 650 510 517 377 323 334 354 1119 1547 1199 1201 2048 641 418 glutathione S-transferase/peroxidase AT1G17180 Solyc07g056490.4 1111 1042 1002 1054 930 887 978 868 1640 1237 933 1327 1131 1137 1256 Glutathione S-transferase-like protein (AHRD V3.3 *** A0A2K3N2T5_TRIPR) Solyc07g056500.4 169 153 240 191 41 25 36 15 206 262 226 131 498 169 190 glutathione S-transferase T5 Solyc07g056510.3 5 4 0 0 0 0 0 0 1 0 0 0 8 0 2 Glutathione S-transferase-like protein (AHRD V3.3 *** A0A2K3N2T5_TRIPR) Solyc07g056520.3 1109 1105 813 772 760 950 935 807 759 737 809 684 1218 1452 940 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** S8CUE5_9LAMI) AT3G14400 Solyc07g056530.3 110 125 146 201 102 155 155 128 116 102 175 163 89 125 175 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2U1N0V9_ARTAN) AT3G14410 Solyc07g056540.3 4475 2884 1442 1588 709 743 651 876 1861 1635 1082 755 2333 1369 2681 glycolate oxidase X92888 AT3G14420 Solyc07g056550.3 1167 1800 1235 1124 934 1063 1039 1023 1110 753 1054 939 2190 1961 1474 Bystin (AHRD V3.3 *** A0A2G3C217_CAPCH) AT1G31660 Solyc07g056560.3 7 7 34 24 33 14 31 14 17 18 19 12 21 24 39 Unknown protein Solyc07g056570.1 13519 5085 5503 6926 1994 2095 1782 1533 4533 13303 13893 5458 2488 4211 17605 notabilis AT3G14440 Solyc07g056580.3 579 331 294 291 249 307 281 360 440 419 331 383 259 306 330 ethylene receptor 2 AT1G66340 Solyc07g056590.3 428 409 499 592 503 546 540 497 594 527 541 583 484 473 449 Polyadenylate-binding protein-interacting protein 9 (AHRD V3.3 *** A0A2G2WEN6_CAPBA) AT3G14450 Solyc07g056600.1 7 4 13 0 5 8 13 11 8 3 6 6 2 0 7 VQ motif-containing protein (AHRD V3.3 *** AT1G78410.2) AT1G78410 Solyc07g056610.2 2 0 0 1 0 0 0 0 0 3 0 0 0 0 0 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3CSL7_CEPFO) AT4G10220 Solyc07g056613.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Mei2-like protein (AHRD V3.3 *-* Q6J741_PINTA) Solyc07g056617.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g056620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g056630.3 1312 735 954 874 617 834 875 601 558 851 821 735 598 712 1035 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QMN4_ARTAN) AT1G78420 Solyc07g056640.1 3177 4337 4036 8736 11517 6060 6251 5942 4550 6190 20446 2052 2826 3747 9448 Unknown protein Solyc07g056650.4 703 2626 3081 2277 4197 3449 2857 4554 3314 1513 2385 3554 2042 2697 2361 Interactor of constitutive active ROPS 1-like protein (AHRD V3.3 *** A0A2K3NH99_TRIPR) AT1G78430 Solyc07g056660.4 2127 2154 1502 1842 1767 1840 2070 2361 2223 2115 1599 1868 1597 2015 2133 Vacuolar sorting protein 39 (AHRD V3.3 *** A0A2U1PI44_ARTAN) AT4G36630 Solyc07g056670.3 13 21 16 29 0 2 6 5 8 23 5 9 8 9 35 gibberellin 2-oxidase 2 Solyc07g056680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g056685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g056690.2 0 1 0 0 2 0 0 0 0 0 0 0 0 3 0 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3CSL7_CEPFO) AT4G10220 Solyc07g056700.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g056701.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *-* Q1PE81_ARATH) Solyc07g056702.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc07g150150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3CSL7_CEPFO) AT4G10220 Solyc07g056704.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3CSL7_CEPFO) AT4G10220 Solyc07g056705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein, putative (DUF239) (AHRD V3.3 *** Q9SK38_ARATH) AT4G10220 Solyc07g056706.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *-* Q8VYE1_ARATH) Solyc07g056708.1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3CSL7_CEPFO) AT4G10220 Solyc07g061700.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g061710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3CSL7_CEPFO) AT4G10220 Solyc07g061715.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein, putative (DUF239) (AHRD V3.3 *-* Q9SK38_ARATH) Solyc07g061720.3 1368 295 99 115 27 50 12 22 220 2659 693 238 129 319 63 gibberellin 2-oxidase 4 AT1G30040 Solyc07g061730.3 4886 1016 324 342 89 55 46 48 546 5560 1750 761 164 605 307 gibberellin 2-oxidase 5 AT1G30040 Solyc07g061740.4 245 62 74 129 60 58 62 51 90 152 96 97 66 86 119 Ankyrin repeat (AHRD V3.3 *** A0A200Q4D4_9MAGN) AT1G03670 Solyc07g061750.4 121 912 594 789 801 929 802 659 1002 742 516 782 351 521 242 Ankyrin repeat (AHRD V3.3 *** A0A200Q4D4_9MAGN) AT1G03670 Solyc07g061760.3 55 355 230 269 299 395 300 279 342 187 159 301 174 249 87 Ankyrin repeat (AHRD V3.3 *-* A0A200Q4D4_9MAGN) Solyc07g061780.4 2015 1867 1839 1771 2435 2602 2532 2346 2042 1922 1570 2194 1692 1847 1634 Ubiquitin carboxyl-terminal hydrolase 19 (AHRD V3.3 *** A0A1U8EZE1_CAPAN) AT1G17110 Solyc07g061790.3 816 1604 1013 1385 1117 1123 945 1315 2110 1348 984 1597 1608 1411 1578 Heme-binding protein 2-like (AHRD V3.3 *** A0A2K3NGA7_TRIPR) AT1G17100 Solyc07g061800.4 79 224 125 151 99 58 58 46 706 992 530 1014 338 225 182 Heme-binding-like protein (AHRD V3.3 *** A0A2I0X1C8_9ASPA) AT1G17100 Solyc07g061805.1 35 36 29 26 16 26 24 17 17 25 32 18 22 38 45 Unknown protein Solyc07g061820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g061840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g061850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g061860.3 0 2 0 0 1 3 0 0 1 0 0 0 0 0 0 Lactoylglutathione lyase / glyoxalase I family protein (AHRD V3.3 *-* A0A2U1N9W4_ARTAN) Solyc07g061865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) ATMG00810 Solyc07g061870.1 6 3 5 3 0 3 1 3 2 3 1 1 3 1 3 glycine-rich cell wall structural protein 1.0-like (AHRD V3.3 *** XP_010324450.1) Solyc07g061880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prostatic spermine-binding protein-like (AHRD V3.3 *** XP_010324449.1) Solyc07g061890.1 4 0 0 10 0 1 0 0 1 0 0 0 0 0 26 Unknown protein Solyc07g061895.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc07g061900.3 979 2225 1602 2007 2521 1949 2018 3405 1761 1713 1185 2052 1389 1431 902 50S ribosomal protein L4 (AHRD V3.3 *** B6TG27_MAIZE) AT1G07320 Solyc07g150151.1 9 4 1 5 0 5 2 2 3 3 5 8 1 22 5 Unknown protein Solyc07g061910.1 25 4 1 4 3 2 0 3 9 1 6 2 23 20 19 Protein NRT1/ PTR FAMILY 7.3 (AHRD V3.3 *-* A0A2G3API5_CAPAN) Solyc07g061920.4 456 528 540 542 339 278 347 219 462 255 395 227 422 626 901 Callose synthase 1 (AHRD V3.3 *** A0A2G2WF26_CAPBA) AT3G14570 Solyc07g061930.1 514 182 263 212 154 194 181 103 113 115 227 129 185 209 293 Unknown protein Solyc07g061935.1 2053 879 697 907 522 710 646 475 522 657 687 518 730 620 1098 C2 domain-containing protein (AHRD V3.3 *-* A0A2G2Z4M9_CAPAN) Solyc07g061940.4 19751 10840 4161 7312 3842 4196 3599 4088 4682 7485 3964 4553 5720 5570 5374 Acetolactate synthase (AHRD V3.3 *** C0L093_TOBAC) AT3G48560 Solyc07g061950.4 2039 1090 1783 974 719 666 638 602 978 1238 1442 834 1093 1201 1320 C2 domain-containing protein (AHRD V3.3 *** A0A2G2WER0_CAPBA) AT1G53590 Solyc07g061960.3 516 440 487 466 327 325 283 307 495 489 443 400 565 522 443 Beta-lactamase-like (AHRD V3.3 *** A0A200QS30_9MAGN) AT1G53580 Solyc07g061970.3 2020 3392 3195 4228 4511 3488 3569 4543 4706 7276 3413 4999 5030 3567 2485 60S ribosomal protein L18a-like protein (AHRD V3.3 *-* A0A2G2WEP8_CAPBA) Solyc07g061980.2 5 1 0 19 0 0 0 0 1 0 0 0 2 3 0 Cytochrome (AHRD V3.3 *** A0A2G2Z4P6_CAPAN) Solyc07g061990.3 396 295 300 266 305 204 229 238 337 246 247 158 262 188 276 Solanesyl diphosphate synthase (AHRD V3.3 *** Q1W5D1_HEVBR) AT1G78510 Solyc07g062000.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta (AHRD V3.3 *-* A0A2G2X5Q2_CAPBA) Solyc07g062010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *** F4IA92_ARATH) AT1G78520 Solyc07g062020.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *** F4IA92_ARATH) Solyc07g062030.3 114 293 276 263 228 282 347 252 295 187 309 354 257 272 310 Chalcone-flavonone isomerase family protein (AHRD V3.3 *** A0A2G2WEX9_CAPBA) AT1G53520 Solyc07g062040.3 308 227 354 240 479 361 492 449 365 240 342 219 277 249 528 Receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A1U8HKL5_CAPAN) AT1G78530 Solyc07g150152.1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 Unknown protein Solyc07g062050.3 407 372 489 367 483 466 541 381 375 225 307 368 395 490 499 SH2 domain-containing protein A (AHRD V3.3 *** SHA_ARATH) AT1G17040 Solyc07g062060.3 334 310 298 207 279 178 186 237 322 221 133 232 224 232 325 Peptide methionine sulfoxide reductase MsrB (AHRD V3.3 *** A0A2Z5A926_9PSED) AT1G53670 Solyc07g062070.3 306 355 320 334 479 505 423 571 360 373 279 351 308 306 305 Ribokinase (AHRD V3.3 *** A0A2G3C1Z1_CAPCH) AT1G17160 Solyc07g062080.4 2487 2416 3130 2545 2600 3088 2980 2384 2237 3055 2717 2141 2307 2639 2112 mitogen-activated protein kinase 11 AT3G14720 Solyc07g062090.3 0 12 16 3 17 6 25 16 6 10 8 11 2 15 12 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2) Solyc07g062100.4 7 528 352 362 593 511 481 514 312 181 183 478 162 486 130 Histone-lysine N-methyltransferase ATX1 (AHRD V3.3 *** A0A2I0W3M9_9ASPA) AT3G14740 Solyc07g062110.3 619 781 758 665 703 806 736 722 730 553 424 657 846 819 588 Protein FLX-like 1 (AHRD V3.3 *** A0A2G2WEQ8_CAPBA) AT3G14750 Solyc07g062115.1 79 46 165 68 45 40 53 39 49 69 77 55 66 68 93 Unknown protein Solyc07g062120.4 143 92 124 159 83 88 113 86 91 143 144 102 135 149 96 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVG3_SOLTU) AT3G14770 Solyc07g062130.3 3843 9340 8472 8858 7735 7004 6928 8198 11952 10547 8701 10600 10673 10337 6763 trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (AHRD V3.3 *** A0A2I4GY66_9ROSI) AT1G78570 Solyc07g062140.3 270 967 1163 1429 1157 1027 1218 1189 2030 463 527 532 1559 1726 966 trehalose-phosphate synthase 1 AT1G78580 Solyc07g062150.3 307 215 241 250 240 155 186 139 265 264 231 187 262 255 268 NAD kinase (AHRD V3.3 *** F2Z9R6_NICBE) AT1G78590 Solyc07g062160.3 978 827 725 754 702 721 836 800 777 1045 603 793 699 787 696 Zinc finger, B-box (AHRD V3.3 *** A0A2U1L313_ARTAN) AT1G78600 Solyc07g062170.3 272 272 405 348 270 265 199 221 322 421 306 294 326 274 503 Protein kinase domain (AHRD V3.3 *** A0A200QFW1_9MAGN) AT4G10390 Solyc07g062180.4 293 326 459 477 380 405 419 366 379 384 434 336 369 376 295 protein VTE6, chloroplastic-like (AHRD V3.3 *** A0A2I4E1A1_9ROSI) AT1G78620 Solyc07g062190.4 1211 1530 1654 1556 2041 2218 2334 1907 1391 1004 1690 1448 1242 1410 1883 50S ribosomal protein L13 (AHRD V3.3 *** A0A1U8HCH6_CAPAN) AT1G78630 Solyc07g062200.2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 088 Solyc07g062210.4 5 23 30 16 32 17 6 8 15 28 7 7 21 20 4 Protein trichome birefringence-like 43 (AHRD V3.3 *** A0A2G2WER8_CAPBA) Solyc07g062220.3 101 56 21 63 67 42 40 26 32 47 40 23 71 76 183 Protein trichome birefringence-like 41 (AHRD V3.3 *** A0A2G2Z532_CAPAN) AT3G14850 Solyc07g062230.4 0 7 6 5 9 10 6 11 2 4 0 2 0 7 0 Seipin (AHRD V3.3 *** A0A1J3G180_NOCCA) Solyc07g062240.1 2 3 0 0 0 1 5 0 0 0 3 0 0 1 0 NAC domain-containing protein (AHRD V3.3 *-* A0A2K3NKE0_TRIPR) Solyc07g062250.3 2466 1609 1580 1703 1394 1661 1516 1342 1458 1926 1681 1572 1538 1804 1958 epstein-barr nuclear antigen (AHRD V3.3 *** AT3G14830.4) AT3G14830 Solyc07g062260.3 618 1403 1652 1712 2924 2393 2388 3094 1978 1283 1939 2074 1460 1771 1898 BES1/BZR1 (AHRD V3.3 *** A0A2K3PP13_TRIPR) Solyc07g062270.3 378 326 437 363 486 496 505 417 472 496 399 383 434 364 499 Gamma-glutamyl hydrolase (AHRD V3.3 *** B2Z9Y3_SOLLC) AT1G78680 Solyc07g062280.3 66 44 53 64 6 16 15 4 41 27 47 45 40 71 119 Gamma-glutamyl hydrolase (AHRD V3.3 *** B2Z9Y3_SOLLC) AT1G78680 Solyc07g062290.3 13 8 10 5 2 9 8 5 34 9 72 11 12 11 12 Ubiquitin domain-containing protein (AHRD V3.3 *** A0A2U1LN61_ARTAN) Solyc07g062300.3 1316 1681 1652 1577 1926 2275 1853 1875 2058 1616 1374 1896 1730 1635 1371 NHL domain-containing protein (AHRD V3.3 *** A0A1Q3AYA6_CEPFO) AT3G14860 Solyc07g062310.4 1885 2664 3299 2138 4408 4570 4508 4453 2989 2846 2278 3743 2741 3237 1806 IRK-interacting protein (AHRD V3.3 *** A0A2I4GYV2_9ROSI) AT3G14870 Solyc07g062320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 extensin-3-like, partial (AHRD V3.3 *-* XP_010315016.1) Solyc07g062330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 proline, histidine and glycine-rich protein 1, partial (AHRD V3.3 *-* XP_019070303.1) Solyc07g062340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 proline, histidine and glycine-rich protein 1, partial (AHRD V3.3 *** XP_019070303.1) Solyc07g062345.1 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc07g062350.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 proline, histidine and glycine-rich protein 1, partial (AHRD V3.3 *** XP_019070303.1) Solyc07g062360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 U1 small nuclear ribonucleoprotein C-like (AHRD V3.3 *** XP_010324445.2) Solyc07g062370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bile salt-activated lipase-like (AHRD V3.3 *** XP_004244374.1) Solyc07g062380.1 0 0 0 0 4 1 3 1 0 0 0 2 0 0 0 Transcription factor (AHRD V3.3 *** A0A2U1MRD5_ARTAN) AT3G14880 Solyc07g062390.4 924 514 601 589 594 748 608 620 573 735 823 715 518 537 711 Tubby-like F-box protein (AHRD V3.3 *** A0A2G3C1Z0_CAPCH) AT1G53320 Solyc07g062400.3 1100 730 1095 1086 983 965 1068 873 875 699 1258 730 934 863 1408 Multiprotein bridging factor 1 (AHRD V3.3 *** S4T643_CAPAN) AT3G58680 Solyc07g062410.4 1472 1569 1244 1014 1494 1511 1388 1641 1110 1213 1163 1400 1367 1479 932 hypothetical protein (AHRD V3.3 *-* AT1G78810.3) AT1G78810 Solyc07g062420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BnaA07g31790D protein (AHRD V3.3 *-* A0A078I7M0_BRANA) Solyc07g062425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR (AHRD V3.3 *-* A0A2U1KN51_ARTAN) Solyc07g062430.3 324 462 457 492 736 722 611 706 500 385 471 639 540 593 335 Polynucleotide 3'-phosphatase ZDP (AHRD V3.3 *** A0A1U8HCK7_CAPAN) AT3G14890 Solyc07g062440.1 212 193 149 145 148 164 141 147 163 137 151 126 269 273 197 hypothetical protein (AHRD V3.3 *** AT3G14900.1) AT3G14900 Solyc07g062450.3 170 155 160 233 155 163 226 197 176 153 140 192 191 215 179 Rab3 GTPase-activating protein non-catalytic subunit (AHRD V3.3 *** A0A1J3DHA6_NOCCA) AT3G14910 Solyc07g062460.4 20 25 66 96 99 95 117 91 54 32 74 81 43 45 64 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (AHRD V3.3 *** A0A1U8HCG0_CAPAN) Solyc07g062470.4 67 48 36 114 65 59 50 50 61 29 68 34 110 66 240 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A1U8HIW3_CAPAN) Solyc07g062480.2 23 117 30 126 9 20 7 15 172 90 29 81 194 266 247 Epidermis-specific secreted glycoprotein EP1 (AHRD V3.3 *** A0A2G2Z4V8_CAPAN) Solyc07g062490.1 377 891 683 479 311 235 248 308 2335 1277 1150 442 920 981 619 Epidermis-specific secreted glycoprotein EP1 (AHRD V3.3 *** A0A2G2WG47_CAPBA) Solyc07g062500.3 1220 1350 636 865 857 828 872 725 1266 1747 505 578 4040 1658 1302 Cytochrome (AHRD V3.3 *** A0A2G2WF27_CAPBA) AT3G14690 Solyc07g062510.2 64 44 78 76 2 10 6 6 75 55 79 36 74 87 149 Cytochrome (AHRD V3.3 *** A0A2G2WF27_CAPBA) AT3G14690 Solyc07g062520.3 534 848 407 601 1187 824 818 1018 1292 1088 661 1381 893 700 621 Cytochrome (AHRD V3.3 *** A0A2G2WF27_CAPBA) AT3G14690 Solyc07g062530.3 662 544 463 692 602 407 383 493 708 630 531 642 571 1264 2700 phosphoenolpyruvate carboxylase 2 Solyc07g062540.3 875 705 518 543 478 501 569 602 419 576 352 567 727 711 435 Mannosyltransferase (AHRD V3.3 *** A0A2G2WF38_CAPBA) AT1G16900 Solyc07g062543.1 320 736 782 802 1390 1527 1870 1559 1109 716 1026 939 618 711 933 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (AHRD V3.3 *** A0A318R3I0_9STAP) Solyc07g062547.1 12 101 28 57 215 178 202 205 69 47 16 98 60 78 40 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (AHRD V3.3 *-* A0A1E7W1A5_9BURK) Solyc07g062560.3 40 122 82 73 438 468 418 376 79 77 102 83 113 82 46 Pollen allergen Ole e 1 family (AHRD V3.3 *** A0A2U1LWI3_ARTAN) AT5G45880 Solyc07g062570.3 2746 3460 2883 3016 4253 3701 3662 4138 3536 2970 2842 3240 4569 3384 3251 Ubiquitin-conjugating enzyme (AHRD V3.3 *** H6VUT0_9FABA) AT1G78870 Solyc07g062580.4 1662 2854 3421 3705 4982 6089 6164 4461 3052 2409 4404 3143 1956 2330 2218 TPR repeat-containing thioredoxin TTL1 (AHRD V3.3 *** A0A2G2Z4X4_CAPAN) AT1G53300 Solyc07g062590.4 306 463 448 390 337 434 465 343 335 238 432 349 477 422 239 Hexosyltransferase (AHRD V3.3 *** A0A2G3BCF8_CAPCH) AT1G53290 Solyc07g062600.4 961 1375 1482 1462 1556 1671 1487 1648 1659 1333 1187 1443 1435 1583 1405 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (AHRD V3.3 *-* A0A1I9LNP0_ARATH) AT3G14980 Solyc07g062610.4 1080 1145 845 979 927 840 808 986 1360 1064 978 1197 1310 1140 1113 Protein DJ-1-like protein B (AHRD V3.3 *** A0A2G2Z591_CAPAN) AT1G53280 Solyc07g062620.3 404 330 445 357 337 318 348 306 274 325 464 291 427 419 440 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1KM25_ARTAN) Solyc07g062630.1 0 1 0 0 0 1 0 0 5 0 0 0 3 3 0 ABC transporter G family member 10 (AHRD V3.3 *** A0A2G2Z509_CAPAN) AT1G53270 Solyc07g062640.3 972 663 698 843 673 695 606 575 703 708 768 670 693 807 1049 hypothetical protein (AHRD V3.3 *-* AT2G31130.6) Solyc07g062650.4 2998 8017 6293 6112 7091 6424 6358 8346 6485 6148 4985 6833 8566 7281 5168 Malate dehydrogenase (AHRD V3.3 *** Q645N1_SOLLC) AT1G53240 Solyc07g062660.4 2357 2138 1761 1857 1546 1856 1826 1752 2161 1904 1684 1929 2110 2189 1554 transcription factor GTE4-like (AHRD V3.3 *** A0A1U8HCK4_CAPAN) AT1G06230 Solyc07g062670.1 19 8 12 21 0 0 0 0 13 10 49 2 0 0 2 Unknown protein Solyc07g062680.3 236 210 325 434 298 343 366 327 255 157 277 342 133 244 212 cycloidea AT3G15030 Solyc07g062685.2 30 21 70 66 29 49 50 33 34 39 34 25 60 48 68 Plant transcription factor NOZZLE (AHRD V3.3 *-* A0A103XLZ7_CYNCS) Solyc07g062700.3 1508 1927 6113 2189 1421 1671 1662 1663 2416 5303 5569 2980 1740 2257 2511 Calcium-binding EF-hand family protein (AHRD V3.3 *** A0A2U1MZJ3_ARTAN) AT1G53210 Solyc07g062710.4 7 100 148 41 59 88 116 54 117 38 327 46 27 42 5 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *-* A0A1I9LST2_ARATH) Solyc07g062715.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc07g062720.3 8 40 50 82 107 107 75 157 180 85 70 138 37 47 41 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L356_ARTAN) AT1G53190 Solyc07g062730.1 1396 1647 2111 1702 2074 2706 2576 2011 2433 1533 2590 2755 1595 2035 2302 Serine/Threonine-kinase pakA-like protein (AHRD V3.3 *-* AT3G15095.1) AT3G15095 Solyc07g062740.4 24 64 40 62 71 52 56 82 68 33 51 48 114 77 65 serine/arginine repetitive matrix protein (AHRD V3.3 --* AT3G15115.1) AT3G15115 Solyc07g062750.4 131 231 220 256 351 302 285 315 179 130 149 195 231 212 133 Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein (AHRD V3.3 *** AT3G15140.1) AT3G15140 Solyc07g062770.2 462 772 620 605 668 896 897 861 814 516 508 765 745 901 543 Tat-binding-like protein 7 (AHRD V3.3 *** A0A2G3C1P2_CAPCH) AT3G15120 Solyc07g062780.3 80 226 297 208 374 332 331 308 205 140 233 262 190 267 134 E3 SUMO-protein ligase MMS21 (AHRD V3.3 *** A0A2G2Z5F2_CAPAN) AT3G15150 Solyc07g062790.1 3 0 1 0 3 2 4 1 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HOX6 (AHRD V3.3 *** A0A2G3BCD2_CAPCH) AT5G53980 Solyc07g062800.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc07g062810.4 30 56 153 137 171 146 122 207 239 59 121 294 22 111 57 D-amino-acid transaminase, chloroplastic (AHRD V3.3 *** A0A2G2Z4Z6_CAPAN) Solyc07g062820.1 93 105 132 108 60 82 76 59 83 82 75 118 65 77 141 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WF01_CAPBA) AT4G18520 Solyc07g062830.3 0 0 0 2 0 0 0 3 0 0 0 0 0 0 0 Unknown protein Solyc07g062840.3 1048 770 1364 785 1299 1366 1026 1525 656 868 767 1404 515 731 386 goblet AT5G53950 Solyc07g062860.3 4862 2265 2644 2362 1637 1519 1659 1480 2157 2695 2219 2137 1859 2201 2588 26S proteasome non-ATPase regulatory subunit 5 (AHRD V3.3 *** A0A200QM10_9MAGN) AT3G15180 Solyc07g062870.3 138 381 513 477 593 516 579 582 470 298 401 471 352 391 359 30S ribosomal protein S20, chloroplastic (AHRD V3.3 *** A0A2G3C1Q1_CAPCH) AT3G15190 Solyc07g062880.3 353 252 275 286 245 324 268 223 302 301 342 317 295 255 354 Protein yippee-like (AHRD V3.3 *** A0A2G2WF08_CAPBA) Solyc07g062890.4 623 224 376 303 175 255 261 162 199 222 344 171 220 243 420 Protein yippee-like (AHRD V3.3 *** A0A1U8EEB0_CAPAN) Solyc07g062910.3 511 236 199 292 191 216 231 184 215 203 293 212 182 240 237 Protein yippee-like (AHRD V3.3 *** A0A1U8EEB0_CAPAN) Solyc07g062920.4 836 913 959 971 945 932 1014 776 985 765 915 851 792 1093 971 transcriptional regulator ATRX-like protein (AHRD V3.3 *-* AT5G53930.1) AT5G53930 Solyc07g062930.3 36 127 117 205 52 64 91 62 94 45 69 92 151 160 152 Ribosomal L11 methyltransferase (AHRD V3.3 *** A0A200PQ76_9MAGN),Pfam:PF06325 AT5G53920 Solyc07g062940.4 594 691 434 478 603 619 560 685 683 571 486 521 647 741 584 Serine/threonine-protein kinase 24 (AHRD V3.3 *** A0A2G2WEZ0_CAPBA) AT3G15220 Solyc07g062950.4 1292 1347 1518 1646 1082 1214 919 877 1407 1263 1851 1264 1419 1417 1286 Serine/threonine-protein kinase WNK (With No Lysine)-related protein (AHRD V3.3 *** A0A2U1Q468_ARTAN) AT5G53900 Solyc07g062960.1 1 0 7 1 1 3 6 5 7 8 7 10 0 6 6 pre-mRNA-splicing factor CWC22 homolog (AHRD V3.3 *** XP_022941070.1) AT3G15250 Solyc07g062970.3 1092 231 441 320 52 43 24 27 178 280 244 136 382 319 475 protein phosphatase 2C AT3G15260 Solyc07g062980.4 110 139 178 293 132 104 100 56 178 117 416 236 80 95 268 Squamosa promoter-binding-like protein (AHRD V3.3 *** A0A078J475_BRANA) Solyc07g062990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 late embryogenesis abundant protein 1-like (AHRD V3.3 --* A0A2I4H8I2_9ROSI) Solyc07g063000.4 670 363 690 443 285 394 332 261 386 301 583 284 281 361 594 Phytosulfokine receptor 2 (AHRD V3.3 *** A0A2G3C1N9_CAPCH) AT5G53890 Solyc07g063010.3 1186 632 812 733 468 567 466 428 744 968 1033 780 629 714 1015 3-hydroxybutyryl-CoA dehydrogenase (AHRD V3.3 *** A0A2G2WF04_CAPBA) AT3G15290 Solyc07g063020.3 259 216 402 971 377 425 573 460 219 406 385 246 202 263 218 Early nodulin-like protein 2 (AHRD V3.3 *** A0A2G2WEZ9_CAPBA) Solyc07g063030.3 0 3 18 0 0 0 0 5 0 0 0 0 0 0 0 Rapid ALkalinization Factor (AHRD V3.3 *** A0A200QWR5_9MAGN) Solyc07g063040.3 692 1172 882 901 1418 1168 1217 1598 1550 1222 884 1386 1182 1079 851 Methylthioribulose-1-phosphate dehydratase (AHRD V3.3 *** A0A1Z5KSY2_FISSO) AT5G53850 Solyc07g063050.1 3019 1023 957 1129 789 926 815 836 843 1101 1288 764 826 770 1270 Transmembrane protein (AHRD V3.3 *** Q67ZR8_ARATH) AT4G13530 Solyc07g063060.2 1 0 0 1 4 0 0 2 0 9 0 0 0 15 0 haloacid dehalogenase-like hydrolase family protein (AHRD V3.3 *-* AT5G53850.5) Solyc07g063070.1 511 691 626 758 1218 912 953 1054 857 588 736 621 1065 685 682 VQ motif-containing protein 4 (AHRD V3.3 *** A0A2G2Z542_CAPAN) Solyc07g063080.4 242 1037 1190 1559 2334 2247 2352 2348 1050 813 1374 1736 280 820 712 Dynamin-related protein 5A (AHRD V3.3 *** A0A2G3C1N3_CAPCH) AT1G53140 Solyc07g063110.4 747 508 604 559 404 396 400 380 447 661 608 475 761 719 533 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2U1NIM9_ARTAN) Solyc07g063120.4 1158 1533 285 998 1601 1626 1727 1799 880 1118 256 696 870 490 323 Protein SPA1-RELATED 3 (AHRD V3.3 *** A0A2G2VZ51_CAPBA) AT3G15354 Solyc07g063130.4 1560 2955 3033 2784 3505 4112 3728 3629 3841 2410 2959 3844 2906 3259 2432 Protein kinase domain (AHRD V3.3 *** A0A200QBC6_9MAGN) AT1G53050 Solyc07g063140.1 161 329 295 324 458 360 418 411 332 253 263 316 267 304 253 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial (AHRD V3.3 *** A0A2G3C1L2_CAPCH) AT4G32915 Solyc07g063145.1 13 20 23 40 18 20 27 25 20 1 16 17 18 23 22 Unknown protein Solyc07g063150.3 258 391 460 467 385 507 529 401 366 282 417 307 338 431 368 DUF616 domain-containing protein (AHRD V3.3 *-* A0A1Q3D7S0_CEPFO) AT1G53040 Solyc07g063160.2 314 238 224 189 105 117 154 88 176 105 120 88 253 247 376 Cytochrome c oxidase copper chaperone (AHRD V3.3 *** A0A2G2Z528_CAPAN) AT3G15352 Solyc07g063170.1 197 304 157 131 94 84 89 89 56 91 100 111 356 238 63 Unknown protein Solyc07g063180.3 60 100 208 139 180 194 180 181 243 248 286 337 210 145 199 Dynein light chain (AHRD V3.3 *** A0A2G2WEX4_CAPBA) Solyc07g063190.3 2412 2689 2721 3106 3077 2881 2996 3379 2817 3535 2777 3307 2014 2520 2566 Thioredoxin (AHRD V3.3 *** A0A200PQX5_9MAGN) AT3G15360 Solyc07g063200.3 283 264 319 282 156 272 221 218 284 332 631 208 303 258 383 E3 ubiquitin-protein ligase rma1h1-like protein (AHRD V3.3 *** A0A2K3P2S4_TRIPR) Solyc07g063210.3 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 Expansin (AHRD V3.3 *** K4CH04_SOLLC) AT3G15370 Solyc07g063220.4 226 272 320 242 169 244 250 148 244 125 312 181 300 255 294 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WM68_9ASPA) Solyc07g063230.3 574 926 830 881 1146 1067 1177 1196 967 938 724 1134 765 917 674 Choline transporter-like protein (AHRD V3.3 *** A0A1R3ICN0_COCAP) AT3G15380 Solyc07g063240.4 392 603 1562 693 756 814 783 892 922 1027 840 586 734 710 607 Silencing defective 5 (AHRD V3.3 *** A0A2U1N7R2_ARTAN) AT3G15390 Solyc07g063250.3 86 89 116 97 73 90 92 88 64 66 103 63 73 82 106 HrpN-interacting protein from malus protein (AHRD V3.3 *** AT3G15395.5) AT3G15395 Solyc07g063260.4 901 798 1655 900 733 816 849 613 1130 879 1204 651 1141 983 1189 MLO-like protein (AHRD V3.3 *** K4CH09_SOLLC) AT5G53760 Solyc07g063270.3 4782 3543 2969 2222 2068 1993 1883 2067 2569 2924 2540 2468 3066 2842 3678 Nucleolar GTP-binding protein 2 (AHRD V3.3 *** A0A0H5RA30_9EUKA) AT1G52980 Solyc07g063280.3 0 2 16 0 18 15 10 15 4 1 8 5 8 0 4 Nucleolar GTP-binding protein 2-like (AHRD V3.3 *** A0A2K3PPY0_TRIPR) Solyc07g063290.3 335 190 156 139 143 119 96 102 119 186 171 192 229 190 106 Transcription factor TFIIIC, tau55-related protein (AHRD V3.3 *** A0A2U1Q9K0_ARTAN) AT3G15420 Solyc07g063300.3 226 292 254 318 254 333 319 269 304 284 242 250 389 301 338 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A2U1MM62_ARTAN) AT3G15430 Solyc07g063310.3 622 239 144 120 73 65 94 105 166 228 135 137 260 218 291 LanC-like protein GCR2 (AHRD V3.3 *** A0A2G3C2B6_CAPCH) AT1G52920 Solyc07g063320.3 7 8 6 6 6 3 0 2 3 6 2 5 5 14 4 LanC-like protein GCR2 (AHRD V3.3 *** A0A2G3C294_CAPCH) Solyc07g063330.4 1001 815 1412 1317 969 1126 1095 825 1034 869 1515 844 902 1099 1241 WD40 repeat (AHRD V3.3 *** A0A200PQQ6_9MAGN) AT3G15470 Solyc07g063340.3 407 409 393 437 420 320 327 349 470 448 491 466 499 340 422 DUF1218 domain-containing protein (AHRD V3.3 *** A0A1Q3DB07_CEPFO) AT1G52910 Solyc07g063345.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* Q4PSP2_ARATH) Solyc07g063350.3 38 78 87 190 56 26 43 20 134 72 296 66 131 58 489 COP1-interacting protein 7 (AHRD V3.3 *** CIP7_ARATH) AT4G27430 Solyc07g063360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3MZK9_TRIPR) Solyc07g063370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-glucosidase (AHRD V3.3 *** B6SYQ7_MAIZE) Solyc07g063380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g063390.3 335 199 197 208 49 52 42 71 114 210 175 117 150 199 300 Beta-glucosidase 16 (AHRD V3.3 *** A0A2G2WEV4_CAPBA) Solyc07g063400.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ABC transporter G family member 14 (AHRD V3.3 *** A0A2G2WEV8_CAPBA) AT4G27420 Solyc07g063410.3 1873 199 47 63 31 10 12 9 30 882 215 42 31 205 461 NAC domain protein (AHRD V3.3 *** S5RDS7_9ROSA) AT4G27410 Solyc07g063420.3 34 3 1 8 0 0 0 1 2 0 14 0 2 8 88 NAC domain-containing protein (AHRD V3.3 *** A0A2U1LQQ4_ARTAN) AT3G15510 Solyc07g063430.3 2319 1226 1015 1367 810 941 926 702 1176 1328 1252 1020 771 862 1590 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *** A0A2U1KPZ4_ARTAN) AT1G52870 Solyc07g063440.3 990 1238 1183 1207 1262 1278 1527 1295 1274 1160 971 1151 1304 1388 1302 Trafficking protein particle complex II-specific subunit-like protein (AHRD V3.3 *** A0A2G2WF16_CAPBA) AT5G54440 Solyc07g063450.3 234 161 134 134 94 162 113 113 136 164 101 185 130 163 157 Lysine-specific histone demethylase 1-like protein 2 (AHRD V3.3 *** A0A2G3C377_CAPCH) AT3G13682 Solyc07g063460.3 815 400 600 377 203 170 170 119 181 365 621 242 202 310 521 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1LBB5_ARTAN) AT5G54400 Solyc07g063465.1 40 28 23 18 2 4 15 3 7 17 10 15 3 13 17 Unknown protein Solyc07g063470.1 7 1 0 1 0 0 0 0 1 2 1 1 2 4 17 hypothetical protein (AHRD V3.3 *** AT1G52855.1) AT1G52855 Solyc07g063480.3 194 273 709 319 285 355 327 177 359 197 576 213 194 234 336 Protein kinase domain (AHRD V3.3 *-* A0A200RBU7_9MAGN) Solyc07g063500.4 13 54 27 57 62 79 72 74 55 30 31 62 44 14 22 Lysine-specific histone demethylase 1-like protein 2 (AHRD V3.3 *** A0A2G3C377_CAPCH) AT3G13682 Solyc07g063510.3 742 365 362 539 183 277 286 196 269 336 356 260 335 449 398 Cystathionine beta-lyase family involved in aluminum resistance (AHRD V3.3 *** A0A2P6V7F0_9CHLO) Solyc07g063520.3 1120 1426 1891 1488 2125 1972 1956 1968 1962 2736 2077 2152 1554 1551 1242 Organic solute transporter ostalpha protein (DUF300) (AHRD V3.3 *** O65422_ARATH) Solyc07g063530.3 667 472 764 708 363 477 608 369 531 456 684 472 510 642 1286 transmembrane protein (AHRD V3.3 *-* AT4G27390.1) AT4G27390 Solyc07g063540.3 373 586 510 458 531 676 609 455 363 389 424 444 524 580 596 hypothetical protein (AHRD V3.3 *** AT2G20820.1) AT2G20820 Solyc07g063550.3 2559 1694 2533 1780 1445 1364 1399 1342 1822 2047 2462 1478 1870 1861 2322 Arf GTPase activating protein (AHRD V3.3 *** A0A200RBV9_9MAGN) AT5G54310 Solyc07g063560.4 118 151 189 241 322 345 317 420 227 145 156 291 52 99 79 Cotton fiber (DUF761) (AHRD V3.3 *** F4HTI9_ARATH) AT1G61260 Solyc07g063570.4 383 355 444 623 550 516 570 463 511 557 348 448 393 422 475 Cytochrome c biogenesis protein family (AHRD V3.3 *** A0A2U1PMY6_ARTAN) AT5G54290 Solyc07g063575.1 139 167 198 109 198 186 170 143 175 138 251 138 257 218 269 BnaC01g19540D protein (AHRD V3.3 *** A0A078GVZ6_BRANA) AT4G27380 Solyc07g063590.4 1126 1310 1331 1693 1744 1825 1840 1769 1590 1031 1300 1365 1008 1401 1526 Myosin-2 (AHRD V3.3 *** A0A2G3C394_CAPCH) AT5G54280 Solyc07g063600.3 825 3859 1206 2126 5866 5599 7054 4635 2970 3623 972 2355 2069 967 812 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3C388_CAPCH) AT5G54270 Solyc07g063610.4 224 158 112 102 101 90 108 92 120 213 317 68 75 58 289 Dynein light chain (AHRD V3.3 *** A0A2G3C370_CAPCH) AT4G27360 Solyc07g063620.3 257 102 263 124 68 92 91 96 73 284 299 74 84 138 177 Membrane lipoprotein lipid attachment site-like protein, putative (DUF1223) (AHRD V3.3 *** O81838_ARATH) AT4G27350 Solyc07g063630.3 1190 936 1000 701 531 455 475 585 831 1115 706 579 1429 768 859 Vesicle-associated protein 4-1 (AHRD V3.3 *** A0A2G2Z5C6_CAPAN) AT5G54110 Solyc07g063640.1 13 22 36 14 30 23 20 24 20 15 44 13 20 25 52 Wound-responsive family protein (AHRD V3.3 *-* A0A2U1LJB1_ARTAN) Solyc07g063650.4 1269 1596 1410 1537 1278 1478 1603 1382 1338 1184 1060 1214 1814 1797 1420 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** A0A2G2Z5A0_CAPAN) AT3G20630 Solyc07g063655.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 Unknown protein Solyc07g063660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 dr1-associated corepressor homolog (AHRD V3.3 *-* XP_015896674.1) Solyc07g063670.2 0 0 0 7 0 2 2 3 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 --* AT2G20080.2) AT4G27330 Solyc07g063680.4 1843 2246 790 2464 1963 1435 1833 2818 1299 2674 2205 2250 1753 1351 1484 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *-* A0A1P8BH78_ARATH) Solyc07g063690.1 50 18 35 49 0 2 1 2 12 25 19 17 11 23 26 Calcium-binding protein PBP1 (AHRD V3.3 *** A0A2G2Z578_CAPAN) Solyc07g063700.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3C305_CAPCH) AT4G27290 Solyc07g063710.2 0 0 0 0 0 0 0 0 1 0 0 0 1 2 14 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3C305_CAPCH) AT4G27290 Solyc07g063720.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 17 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3C305_CAPCH) AT4G27290 Solyc07g063730.3 2 2 6 8 0 0 0 0 0 0 0 2 3 1 113 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3C305_CAPCH) AT4G27290 Solyc07g063740.2 77 360 272 293 355 398 338 393 329 310 355 312 252 178 253 Ferredoxin-like protein (AHRD V3.3 *** F8WLD0_CITUN) Solyc07g063750.3 140 95 117 75 67 75 58 81 111 63 108 78 51 109 89 S receptor kinase (AHRD V3.3 *** A4UWL8_BRANA) AT4G27290 Solyc07g063760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G2YVF7_CAPAN) Solyc07g063770.3 733 487 421 259 20 19 18 28 283 465 260 115 770 325 244 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A1U8HJC3_CAPAN) Solyc07g063780.2 0 0 0 0 0 0 0 1 1 1 0 2 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2Z5E8_CAPAN) Solyc07g063790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein At5g49610-like (AHRD V3.3 *-* A0A2I4EQQ3_9ROSI) Solyc07g063800.2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3C353_CAPCH) Solyc07g063810.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3C314_CAPCH) Solyc07g063820.3 433 359 289 353 268 342 316 343 310 359 425 306 349 335 239 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2Z5Q1_CAPAN) Solyc07g063830.3 33 73 153 219 129 69 129 94 136 77 127 77 45 74 56 bHLH transcription factor142 AT3G20640 Solyc07g063840.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 DNA-binding storekeeper protein-related transcriptional regulator (AHRD V3.3 --* AT2G25650.1) Solyc07g063850.3 6228 6188 7692 8325 10425 9305 7901 12190 9505 9153 5929 12080 6218 4913 3482 IAA-amido synthetase 3-9 AT5G54510 Solyc07g063860.4 87 263 277 291 377 340 344 389 247 254 265 247 207 227 144 DUF538 domain-containing protein (AHRD V3.3 *** A0A1Q3D5N1_CEPFO) AT5G54530 Solyc07g063870.3 5151 1800 2092 1550 869 997 864 954 1474 2336 1718 1429 1695 1881 2425 Uncharacterized conserved protein (UCP012943) (AHRD V3.3 *-* AT5G54540.1) AT5G54540 Solyc07g063880.4 19 27 15 29 23 16 17 7 35 63 49 13 53 11 43 Beta-glucosidase 34 (AHRD V3.3 *** A0A2G2Z5D2_CAPAN) AT5G54570 Solyc07g063890.2 2036 3936 3053 2500 3090 3339 3102 3733 2199 2452 2452 2851 4092 3365 2502 Ribosomal protein L2 (AHRD V3.3 *** A0A200QMJ3_9MAGN) AT4G36130 Solyc07g063900.3 1221 1398 1209 996 815 819 722 714 674 895 925 824 2027 1324 1158 RNA binding protein (AHRD V3.3 *-* B6U487_MAIZE) AT5G54580 Solyc07g063910.4 1222 236 311 239 215 254 136 124 113 111 186 115 70 852 5203 Unknown protein Solyc07g063920.3 2 6 0 0 30 29 39 31 13 7 5 2 3 3 0 Organic cation/carnitine transporter 4 (AHRD V3.3 *** A0A2G2WG95_CAPBA) AT3G20660 Solyc07g063930.4 1176 660 477 385 328 480 335 328 257 790 255 476 606 455 427 Organic cation/carnitine transporter 4 (AHRD V3.3 *-* A0A2G2WG88_CAPBA) Solyc07g063940.2 3071 2488 3179 1340 615 681 492 737 1326 5281 3241 1408 1783 1456 1740 SCARECROW Solyc07g063950.3 560 548 748 414 514 594 557 530 396 424 420 463 383 362 348 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3NSY3_TRIPR) AT5G54590 Solyc07g063960.3 423 1368 1706 1173 1674 1305 1357 1485 1436 878 1306 1197 1125 1405 1111 50S ribosomal protein L24, chloroplastic (AHRD V3.3 *** A0A1U8EMT5_CAPAN) AT5G54600 Solyc07g063970.3 45 102 153 163 319 338 310 252 111 70 170 165 79 175 69 C2H2 zinc finger protein (AHRD V3.3 *** A0A2K3NT14_TRIPR) AT5G54630 Solyc07g063980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g063990.1 5 2 11 0 1 3 3 0 1 0 2 1 12 7 8 Unknown protein Solyc07g064000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g064010.3 298 299 254 394 253 336 319 276 222 284 375 291 421 347 209 Formin-like protein (AHRD V3.3 *-* A0A2G2WFE4_CAPBA) AT5G54650 Solyc07g064020.4 144 113 271 263 68 68 56 30 91 100 244 71 178 188 485 21.7 kDa class VI heat shock protein (AHRD V3.3 *** A0A2G2WFJ0_CAPBA) AT5G54660 Solyc07g064030.4 854 1504 1320 1618 2151 2226 2223 2797 1689 1116 1175 1818 693 1181 754 Kinesin-like protein (AHRD V3.3 *** A0A2G2WF79_CAPBA) AT4G21270 Solyc07g064040.3 2123 2231 2405 2467 2999 3301 3010 2789 2821 3491 3240 2431 2914 2084 2425 bHLH transcription factor143 AT5G54680 Solyc07g064050.3 6 29 44 29 39 38 34 24 23 38 58 32 5 20 57 Hexosyltransferase (AHRD V3.3 *** A0A2G2WF78_CAPBA) AT5G54690 Solyc07g064060.3 1271 642 542 594 574 605 554 552 674 949 585 567 658 659 837 WD-40 repeat containing protein (AHRD V3.3 *** A0A0K0XR28_TOBAC) AT5G54730 Solyc07g064070.3 0 0 0 0 0 0 0 0 0 2 0 0 3 0 0 U4/U6 small nuclear ribonucleoprotein Prp31-like (AHRD V3.3 *** A0A2I4E1L8_9ROSI) Solyc07g064080.4 529 664 798 860 855 959 1103 807 763 595 875 713 582 757 998 amino-terminal region of chorein (AHRD V3.3 *** AT3G20720.2) AT3G20720 Solyc07g064090.3 855 646 1016 998 675 814 822 704 685 798 845 808 757 843 884 fertilization-independent endosperm protein AT3G20740 Solyc07g064110.3 694 656 738 944 841 969 996 823 649 569 591 760 583 767 773 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QKW5_9MAGN) AT4G04790 Solyc07g064100.1 38 92 133 133 82 83 92 74 115 66 156 94 110 145 127 Chlororespiratory reduction 41 (AHRD V3.3 *** A0A0F7J422_9ROSI) AT1G51100 Solyc07g064120.2 0 0 0 0 10 2 0 0 1 0 0 3 0 2 37 ABC transporter B family member 22 (AHRD V3.3 *** A0A2G2Z5W6_CAPAN) Solyc07g064130.2 71896 53681 30525 46323 42441 36795 35165 47607 46976 61566 38457 47852 61931 45839 36806 Polyubiquitin (AHRD V3.3 *** F1SY21_MESCR) Solyc07g064150.4 40458 16418 11886 11778 3825 3878 4173 3127 6940 9673 9331 5570 11563 11620 17527 Protein translation factor SUI1-like protein (AHRD V3.3 *** A0A1U8FM48_CAPAN) AT4G27130 Solyc07g064160.3 6271 2624 14593 18367 1150 1143 1236 1023 7079 6258 8126 7234 10410 9640 30522 Thiamine thiazole synthase, chloroplastic (AHRD V3.3 *** A0A2G2WFN7_CAPBA),Pfam:PF01946 AT5G54770 Solyc07g064170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pectin methylesterase 1 Solyc07g064180.4 6 22 22 38 26 40 32 55 15 14 20 17 33 31 41 pectin methylesterase 2 Solyc07g064190.3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Pectinesterase (AHRD V3.3 *** Q9SEE7_SOLTU) Solyc07g064200.4 0 3 3 0 0 0 6 3 0 0 0 0 0 0 0 COBRA-like protein 10 (AHRD V3.3 *** A0A2G3C2S4_CAPCH) AT3G20580 Solyc07g064210.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Preproalbumin PawS1 (AHRD V3.3 *** A0A023GYI9_9ASTR) Solyc07g064220.1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 Preproalbumin PawS1 (AHRD V3.3 *** A0A023GYI9_9ASTR) Solyc07g064230.4 102 224 326 178 277 305 328 278 217 159 222 229 164 184 156 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** F4JIR5_ARATH) AT5G54780 Solyc07g064240.4 642 791 1677 1199 872 866 759 638 773 1137 1814 571 742 960 967 Early nodulin-like protein 2-like (AHRD V3.3 *** A0A2K3LF88_TRIPR) AT3G20570 Solyc07g064250.3 764 1346 1074 1101 1017 1067 1088 1177 1556 1068 850 1414 1373 1424 1077 Protein disulfide-isomerase 5-4 (AHRD V3.3 *** A0A2G2WFB2_CAPBA) AT3G20560 Solyc07g064260.2 104 73 49 84 39 73 87 58 45 58 17 63 27 59 87 F-box/RNI-like superfamily protein (AHRD V3.3 *** A0A2U1NFX9_ARTAN) AT4G14103 Solyc07g064270.3 3046 3611 2791 4096 3994 3618 3906 3720 4000 3664 3026 4240 4082 4061 3490 Glucose-6-phosphate/phosphate translocator 2, chloroplastic (AHRD V3.3 *** A0A2G2Z5J6_CAPAN) AT5G54800 Solyc07g064280.3 165 482 294 456 566 530 561 802 430 353 364 476 383 432 327 Tryptophan synthase beta chain (AHRD V3.3 *** B2J8R2_NOSP7) AT5G54810 Solyc07g064290.3 590 520 790 543 528 612 602 506 408 558 600 561 694 639 665 Ras-related small GTP-binding family protein (AHRD V3.3 *** A0A2U1P8S6_ARTAN) AT5G54840 Solyc07g064300.3 1191 781 740 760 600 727 723 520 629 603 663 667 646 762 716 hypothetical protein (AHRD V3.3 *-* AT1G50910.1) AT1G50910 Solyc07g064310.2 213 382 272 172 279 295 277 256 264 221 179 299 391 314 246 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1NN53_ARTAN) Solyc07g064320.3 110 101 160 102 77 75 64 34 106 90 160 79 134 127 232 hexon (AHRD V3.3 *** AT5G54850.1) AT5G54850 Solyc07g064330.3 4017 2639 3144 3137 2937 3098 2825 2434 2066 2015 3101 2592 2434 3018 2966 DNA polymerase (AHRD V3.3 *** Q3LHT0_TOBAC) AT1G50840 Solyc07g064340.3 503 331 455 323 377 396 399 251 306 303 499 317 371 375 598 Serine/threonine-protein kinase PBS1 (AHRD V3.3 *** A0A2G2Z5K8_CAPAN) Solyc07g064350.3 723 1151 930 565 673 795 661 641 975 364 815 636 1101 1193 1009 KRR1 family protein (AHRD V3.3 *** AT3G24080.4) AT3G24080 Solyc07g064360.3 34 51 48 35 50 38 48 43 23 16 32 41 75 54 4 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *** A0A124SHR6_CYNCS) AT1G51538 Solyc07g064370.1 4 0 0 0 7 3 2 3 0 1 0 0 0 1 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) AT1G51538 Solyc07g064380.4 82 88 48 65 37 71 31 42 63 28 21 39 98 25 60 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *** A0A124SHR6_CYNCS) AT1G51538 Solyc07g064390.1 5 2 1 4 0 0 0 0 0 0 0 0 0 1 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1NN53_ARTAN) Solyc07g064400.2 3 9 0 5 2 1 0 0 0 2 0 0 0 1 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *** A0A124SHR6_CYNCS) AT1G51538 Solyc07g064410.1 8 56 0 20 33 23 21 55 10 17 0 5 19 0 0 Fatty acid desaturase 4, chloroplastic (AHRD V3.3 *** A0A1U8FLY9_CAPAN) AT4G27030 Solyc07g064420.3 185 152 115 172 84 112 94 98 134 162 84 149 168 103 176 inositol-1%2C4%2C5-trisphosphate 5-phosphatase (AHRD V3.3 *** AT5G54870.1) AT4G27020 Solyc07g064430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-related sequence 5-like (AHRD V3.3 *** A0A2K3LK03_TRIPR) Solyc07g064440.3 875 445 288 280 159 150 127 143 273 370 278 245 338 319 406 inositol-1%2C4%2C5-trisphosphate 5-phosphatase (AHRD V3.3 *** AT5G54870.1) AT4G27020 Solyc07g064450.4 0 6 1 0 0 1 3 6 0 4 12 1 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200Q6V0_9MAGN) Solyc07g064470.4 99 141 182 175 100 111 182 120 170 140 134 159 141 123 143 Protein FATTY ACID EXPORT 5 (AHRD V3.3 *** A0A1U8FKN4_CAPAN) AT1G50740 Solyc07g064480.1 151 195 113 125 164 161 144 195 162 142 103 274 164 131 130 DTW domain-containing protein (AHRD V3.3 *** A0A1Q3BKT5_CEPFO) AT5G54880 Solyc07g064490.4 312 313 254 283 253 277 278 263 222 226 193 304 291 286 293 CRS2-associated factor 2, mitochondrial (AHRD V3.3 *** A0A2G2Z5G3_CAPAN) AT5G54890 Solyc07g064500.3 386 516 1083 802 946 1019 1052 897 1042 789 1111 837 722 876 949 Purple acid phosphatase (AHRD V3.3 *** A0A2G2WF94_CAPBA) AT3G20500 Solyc07g064510.3 5020 5337 4482 4566 5656 6089 5615 5920 4882 4630 4408 4715 5474 5554 4562 RNA-binding protein (AHRD V3.3 *** A0A2K3PBB6_TRIPR) AT4G27000 Solyc07g064520.3 999 1017 895 572 730 627 631 660 734 547 795 855 953 999 866 RNA helicase DEAD24 AT5G54910 Solyc07g064540.3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RING-finger%2C DEAD-like helicase%2C PHD and SNF2 domain-containing protein (AHRD V3.3 *-* AT2G40770.3) Solyc07g064550.3 395 490 341 288 437 414 461 450 306 267 350 301 511 464 319 Polyadenylate-binding protein interacting protein (AHRD V3.3 *** Q93V36_ARATH) AT5G54920 Solyc07g064560.4 1805 814 541 669 475 450 493 561 705 762 633 636 948 978 924 AT hook motif-containing protein (AHRD V3.3 *-* A0A2K3PS21_TRIPR) AT5G54930 Solyc07g064570.3 271 395 294 323 425 498 426 523 352 242 338 432 304 352 208 Rho GTPase-activating protein (AHRD V3.3 *** AT3G20490.1) AT3G20490 Solyc07g064580.3 773 871 1191 1083 1371 1774 1553 1458 1415 928 1494 1172 840 1036 1001 Actin cytoskeleton-regulatory complex pan-like protein (AHRD V3.3 *** Q9LPT5_ARATH) AT1G50660 Solyc07g064590.3 235 304 315 371 389 321 363 340 285 258 264 209 355 385 225 inducible plastid-lipid associated protein AT1G50670 Solyc07g064600.3 22 240 346 385 66 104 99 63 15944 1532 2597 3378 484 577 80 Endoribonuclease L-PSP family protein (AHRD V3.3 *-* A0A1I9LS34_ARATH) Solyc07g064610.3 1001 1674 1873 1774 2194 2101 2221 1978 1931 1619 1848 1682 1913 1669 1499 alcium-dependent protein kinase 1 Solyc07g064620.2 925 443 434 544 159 157 163 101 202 315 456 153 443 274 496 Protein translation factor SUI1-like protein (AHRD V3.3 *** A0A1U8FM10_CAPAN) AT5G54940 Solyc07g064625.1 261 221 241 226 186 285 245 254 226 209 220 203 170 282 275 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R1D8_9MAGN) AT4G28010 Solyc07g064630.4 511 316 395 287 255 301 279 245 321 306 617 281 365 288 476 F-box/LRR-repeat protein 4 (AHRD V3.3 *** A0A1J3CWX4_NOCCA) AT4G26980 Solyc07g064640.3 109 150 150 151 120 180 151 108 161 123 193 140 137 167 184 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (AHRD V3.3 *** A0A2G3C2V0_CAPCH) AT4G26965 Solyc07g064650.3 7 22 23 11 1 4 3 3 39 24 85 5 43 22 45 Senescence regulator S40 (AHRD V3.3 *** A0A200PYV8_9MAGN) AT4G04630 Solyc07g064660.1 0 1 0 0 0 0 0 2 2 3 0 0 0 0 0 Geranylgeranyl diphosphate synthase (AHRD V3.3 *** A0A223HEC2_CAMSI) Solyc07g064670.3 339 638 577 628 689 663 650 591 721 578 609 380 707 471 682 Hexosyltransferase (AHRD V3.3 *** A0A2G3C2Y7_CAPCH) Solyc07g064680.3 3231 1955 2210 1900 1759 1546 1488 1809 2133 2845 1930 2237 2257 2011 1947 Autophagy-related protein (AHRD V3.3 *** A0A2G3C2V6_CAPCH) Solyc07g064690.1 231 258 197 270 169 163 151 100 252 256 207 169 313 207 233 50S ribosomal protein L34 (AHRD V3.3 *** AT1G29040.1) AT1G29040 Solyc07g064700.4 1919 1907 2347 1974 2126 2744 2705 2333 2244 1793 2400 2153 1788 2083 1989 Bromodomain-containing protein (AHRD V3.3 *** A0A2K3PD43_TRIPR) AT5G55040 Solyc07g064710.3 116 124 128 150 107 139 149 122 137 80 87 79 93 149 136 Tetraacyldisaccharide 4'-kinase (AHRD V3.3 *** A0A200QBG8_9MAGN) AT3G20480 Solyc07g064720.3 20 6 175 24 0 0 0 0 7 9 4 4 3 5 6 Gdsl esterase/lipase (AHRD V3.3 *** A0A2P4JQK3_QUESU) AT5G55050 Solyc07g064730.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gdsl esterase/lipase (AHRD V3.3 *** A0A2P4JQK3_QUESU) AT5G55050 Solyc07g064740.3 428 471 733 415 547 472 533 527 456 519 549 467 592 580 511 Rab3 GTPase-activating protein catalytic subunit (AHRD V3.3 *** A0A200QG39_9MAGN) AT5G55060 Solyc07g064750.1 0 5 0 13 21 17 8 13 3 0 4 3 1 4 1 Threonine-tRNA ligase mitochondrial-like (AHRD V3.3 *** A0A2K3NPS7_TRIPR) Solyc07g064760.2 2 32 8 40 23 7 12 27 20 12 19 28 20 18 31 nucleolin (AHRD V3.3 --* XP_014504166.1) Solyc07g064770.2 0 0 0 4 3 1 1 3 0 0 0 0 0 0 0 Unknown protein Solyc07g064780.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 glycine-rich cell wall structural protein 1-like (AHRD V3.3 *-* XP_019070308.1) Solyc07g064790.4 5 2 0 10 18 20 8 10 5 0 2 4 0 3 0 Threonine--tRNA ligase, cytoplasmic (AHRD V3.3 *-* A0A2G2WFC7_CAPBA) Solyc07g064800.3 817 1776 1475 1364 1836 1722 1819 1647 1319 975 1333 1085 2383 1867 1554 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (AHRD V3.3 *** B6TRW8_MAIZE) AT4G26910 Solyc07g064810.3 443 735 462 475 537 655 632 813 467 459 314 596 618 582 440 Imidazole glycerol phosphate synthase hisHF (AHRD V3.3 *** A0A2G2WFL7_CAPBA) AT4G26900 Solyc07g064820.1 35 36 99 42 34 6 7 24 30 24 148 23 47 24 118 MAP kinase kinase kinase 59 AT5G55090 Solyc07g064830.3 443 555 391 463 604 536 625 607 516 411 447 452 365 584 457 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic (AHRD V3.3 *** A0A2G2WFE8_CAPBA) AT3G20440 Solyc07g064840.3 201 175 112 123 76 77 78 124 109 130 110 133 207 161 236 oral cancer-overexpressed protein 1 homolog (AHRD V3.3 *** A0A2I4HBL0_9ROSI) Solyc07g064850.3 800 743 870 785 698 746 744 541 457 465 785 647 889 865 1041 Adenylyltransferase and sulfurtransferase MOCS3 (AHRD V3.3 *** A0A2G2Z5P6_CAPAN) AT5G55130 Solyc07g064860.2 39 2 0 2 1 0 1 0 0 5 0 1 0 25 63 Unknown protein Solyc07g064870.3 1 5 23 22 0 2 3 2 8 32 10 6 12 2 13 Endoglucanase (AHRD V3.3 *** A0A2G2WGL3_CAPBA) Solyc07g064880.4 520 608 825 707 380 476 435 407 749 609 625 703 785 775 804 Small ubiquitin-related modifier (AHRD V3.3 *** A0A2G3BMW1_CAPCH) AT4G26840 Solyc07g064890.1 7415 6883 9204 8664 10746 11847 11318 8654 6140 6784 11912 8057 6767 6674 10415 Ethylene Response Factor F.2 AT1G50640 Solyc07g064900.3 568 663 798 783 508 795 855 483 871 672 1015 672 708 789 1112 DUF3537 domain-containing protein (AHRD V3.3 *** A0A1Q3D045_CEPFO) AT3G20300 Solyc07g064910.3 349 543 501 593 819 805 776 868 670 483 563 631 650 604 474 EH domain-containing protein 1 (AHRD V3.3 *** A0A2G2Z5M4_CAPAN) AT3G20290 Solyc07g064920.3 266 264 358 329 252 293 259 204 270 209 326 237 305 241 413 SWIB domain-containing protein (AHRD V3.3 *** A0A1Q3D0Q2_CEPFO) AT4G26810 Solyc07g064930.3 427 873 618 600 679 659 587 660 619 421 467 547 1023 791 432 GrpE protein homolog (AHRD V3.3 *** A0A2G3C2M4_CAPCH) AT4G26780 Solyc07g064940.3 519 503 541 532 653 531 555 576 621 498 467 598 575 528 527 Thioredoxin-like protein, chloroplastic (AHRD V3.3 *** A0A2G2WFU8_CAPBA) AT4G37200 Solyc07g064950.3 560 740 566 558 529 540 660 479 778 374 563 496 641 852 880 Trigger factor (AHRD V3.3 *** A0A200RBE3_9MAGN) AT5G55220 Solyc07g064960.2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 Phosphatidate cytidylyltransferase (AHRD V3.3 *** A0A2G2Z5U2_CAPAN),Pfam:PF01148 Solyc07g064970.4 2543 6226 6619 5723 9055 8096 8262 8146 7727 5071 6302 7153 6319 7478 6405 65-kDa microtubule-associated protein 1-like (AHRD V3.3 *** Q9FEV9_TOBAC),Pfam:PF03999 AT5G55230 Solyc07g064980.3 4560 3358 3335 3985 3263 2448 2884 3019 2678 4522 3833 3221 4031 3335 2758 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 (AHRD V3.3 *-* A0A2I4DYK6_9ROSI) AT4G26750 Solyc07g064990.3 600 669 827 1092 241 222 128 240 618 1258 397 447 226 444 244 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** F4JW89_ARATH) AT5G55250 Solyc07g065000.3 779 820 699 556 593 741 673 608 643 642 559 578 871 856 798 PHD finger protein (AHRD V3.3 *** A0A2G2X6I5_CAPBA) AT1G50620 Solyc07g065010.4 918 406 499 489 375 407 412 323 407 590 523 463 478 525 660 Lipid-binding serum glycoprotein (AHRD V3.3 *** A0A200RBG7_9MAGN) AT1G04970 Solyc07g065020.3 784 825 971 721 901 1071 1063 738 574 622 765 595 792 831 948 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A1U8HJH5_CAPAN) AT5G55260 Solyc07g065030.3 2160 1618 1568 1466 1344 1369 1174 1200 1820 1575 1565 1314 1738 1516 1975 Syntaxin (AHRD V3.3 *** A0A2G3C2M7_CAPCH) AT1G16240 Solyc07g065040.3 170 272 289 301 454 421 437 440 293 232 221 379 317 378 197 Transcription initiation factor TFIID subunit 6b (AHRD V3.3 *** A0A2G3C2L0_CAPCH) AT1G04950 Solyc07g065050.4 500 937 935 870 970 872 967 951 896 621 791 1014 985 927 900 Cell division protein FtsZ (AHRD V3.3 *** A0A2G2WFK7_CAPBA) AT5G55280 Solyc07g065060.1 106 141 65 135 231 159 112 166 105 136 40 155 183 93 53 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1LYZ9_ARTAN) Solyc07g065070.2 0 5 15 13 5 9 14 12 4 2 1 8 0 5 5 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1LYZ9_ARTAN) Solyc07g065080.4 551 785 705 594 667 870 830 704 795 761 1053 750 569 632 722 Fimbrin-3 (AHRD V3.3 *** A0A2G3C2R5_CAPCH) AT4G26700 Solyc07g065090.2 472 13578 6419 11313 18318 12602 12704 19574 23140 7446 10877 21522 7432 14359 5895 Polygalacturonase inhibiting protein (AHRD V3.3 *** C4PG28_SOLTO) AT5G06860 Solyc07g065110.1 41 1114 469 976 3353 2867 2976 2438 739 231 702 636 390 789 411 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein (AHRD V3.3 *** A0A2P5G019_TREOI) AT5G55450 Solyc07g065120.3 2023 3881 5429 3231 3951 4242 4626 3989 3586 3822 4865 2963 3824 2883 2493 Glycerophosphodiester phosphodiesterase GDPDL4 (AHRD V3.3 *** A0A2G2Z5P4_CAPAN) AT5G55480 Solyc07g065130.3 8 44 24 37 99 72 82 52 30 41 56 32 27 59 20 Mo25-like (AHRD V3.3 *** A0A200QFJ7_9MAGN) Solyc07g065140.4 449 560 894 893 871 858 809 646 596 525 786 590 552 634 698 Beta-1,2-xylosyltransferase (AHRD V3.3 *** Q2UVB5_SOLTU) AT5G55500 Solyc07g065150.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g065160.4 11 4 4 8 5 3 2 0 8 4 30 0 9 2 21 Pirin-like protein (AHRD V3.3 *** A0A2G3C2M5_CAPCH) AT1G50590 Solyc07g065170.3 2700 4841 5049 3442 5189 5229 5190 4062 2968 2105 4102 3032 5594 5185 4499 40S ribosomal protein S8 (AHRD V3.3 *** A0A2G2Z5W1_CAPAN) AT5G59240 Solyc07g065180.3 92 124 108 101 93 127 112 126 152 122 151 120 141 132 134 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG (AHRD V3.3 *** A0A200RBG5_9MAGN) AT1G50575 Solyc07g065190.4 9 17 16 40 16 24 7 15 17 15 24 9 35 9 4 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6RV38_ACTCH) Solyc07g065200.3 1159 1356 1403 1238 1389 1067 1202 1184 1156 1309 1276 1509 1759 1445 1038 Mitochondrial import inner membrane translocase subunit TIM22-3 (AHRD V3.3 *** A0A1U8HD72_CAPAN) AT4G26670 Solyc07g065210.4 107 1670 1539 2132 3319 3532 3364 4043 2254 935 1477 2114 245 925 1119 kinesin related protein AT3G20150 Solyc07g065220.3 1028 661 349 442 487 466 415 633 524 780 442 606 585 537 532 Calcium-dependent lipid-binding domain-containing protein (AHRD V3.3 *-* A0A2K3LFN3_TRIPR) Solyc07g065230.1 2504 1536 1479 1355 1447 1615 1481 1446 1336 1844 1733 1415 1951 1699 2012 Calcium-dependent lipid-binding domain-containing protein (AHRD V3.3 *-* A0A2K3LFN3_TRIPR) Solyc07g065240.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Receptor-like kinase (AHRD V3.3 *-* A0A072V109_MEDTR) Solyc07g065250.3 241 262 225 210 205 175 155 158 161 147 267 138 309 272 360 MAP kinase kinase kinase 60 AT5G55560 Solyc07g065260.4 1564 1310 1291 1407 1503 1635 1452 1436 1324 1458 1983 1356 1423 1222 1728 WRKY transcription factor 18 AT4G26640 Solyc07g065270.1 1725 1241 1526 1679 1301 1762 1798 1405 1704 1796 1696 2132 1442 1713 1333 GRAS7 Solyc07g065275.1 445 798 1000 754 937 797 899 862 975 734 906 821 978 970 878 NADH-ubiquinone oxidoreductase (AHRD V3.3 *** A0A200QX89_9MAGN) AT4G16450 Solyc07g065290.3 29 14 20 19 14 31 19 15 9 11 6 5 24 32 15 Zinc finger transcription factor 51 Solyc07g065300.3 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 Calcium-transporting ATPase (AHRD V3.3 *** A0A1Q3AP80_CEPFO) Solyc07g065310.3 324 484 478 491 457 464 551 518 504 381 406 440 432 453 328 CBS domain-containing protein / transporter associated domain-containing protein (AHRD V3.3 *** A0A2U1M0H9_ARTAN) AT3G13070 Solyc07g065320.4 1219 784 544 945 141 108 125 74 270 732 354 110 1596 574 745 ABC transporter C family member 3 (AHRD V3.3 *** A0A2G2WFH5_CAPBA) AT3G13080 Solyc07g065330.3 214 64 19 31 18 21 17 19 20 31 23 11 49 33 28 Germin-like protein 11-1 (AHRD V3.3 *** A0A2G2WFI2_CAPBA) AT5G61750 Solyc07g065340.1 2368 1766 380 987 623 511 537 595 557 1508 233 207 1762 660 482 Serine acetyltransferase (AHRD V3.3 *** A0A2K3M2Y7_TRIPR) AT3G13110 Solyc07g065350.2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2I4DU44_9ROSI) Solyc07g065360.2 0 5 0 0 0 0 0 0 1 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2U1L272_ARTAN) AT5G55590 Solyc07g065370.4 2920 2320 2572 2278 1621 1932 1906 1586 2294 1786 2160 1763 2650 2389 2670 Agenet domain containing protein (AHRD V3.3 *** A0A2P5B3V1_PARAD) AT5G55600 Solyc07g065380.4 623 598 426 511 349 246 248 274 245 350 519 145 1174 737 776 zinc transporter EF026083 AT1G55910 Solyc07g065400.3 216 190 102 276 247 253 272 166 150 253 240 182 218 150 162 Mitochondrial import inner membrane translocase subunit TIM50 (AHRD V3.3 *-* A0A2G3BC84_CAPCH) Solyc07g065410.1 219 147 167 112 36 31 16 21 46 117 100 67 360 118 151 hypothetical protein (AHRD V3.3 *** AT5G41761.1) AT5G41761 Solyc07g065420.1 8 6 3 17 0 9 11 3 9 6 1 5 16 13 9 Protein MIZU-KUSSEI 1 (AHRD V3.3 *** A0A1U8GTQ9_CAPAN) AT5G06990 Solyc07g065430.2 53 128 148 152 196 197 246 136 103 60 124 128 121 152 107 DNA topoisomerase 6 subunit A (AHRD V3.3 *-* E1ZHQ0_CHLVA) AT3G13170 Solyc07g065440.4 18 51 53 28 23 22 37 49 25 33 13 49 32 35 16 Meiotic recombination protein SPO11-1 (AHRD V3.3 *-* A0A2G2Z5U1_CAPAN) Solyc07g065450.3 52 48 48 67 76 79 71 41 24 31 38 53 23 67 18 Two pore potassium channel a (AHRD V3.3 *** A0A1U8EC70_CAPAN) AT5G55630 Solyc07g065460.1 27 38 53 92 96 128 106 160 65 51 25 76 21 44 22 UPA24 (AHRD V3.3 *-* C8YZB6_CAPAN) AT3G13175 Solyc07g065470.4 443 376 409 263 292 372 296 301 296 268 250 302 381 357 364 Cysteine synthase (AHRD V3.3 *** B6U9G4_MAIZE) AT1G55880 Solyc07g065480.3 490 545 692 603 578 658 615 409 561 285 676 481 794 696 923 Na-translocating NADH-quinone reductase subunit A (AHRD V3.3 *** AT5G55640.1) AT5G55640 Solyc07g065490.3 6688 7648 10755 7686 11560 13097 11980 11780 9751 6201 14375 9705 9134 9884 11998 DEK (AHRD V3.3 *-* A0A200RBP9_9MAGN) AT5G55660 Solyc07g065500.2 478 244 413 342 245 242 284 175 275 609 1140 350 157 211 473 Nuclear transcription factor Y subunit B-3 (AHRD V3.3 *** A0A2G2WFH7_CAPBA) Solyc07g065510.4 1253 818 835 719 696 755 654 587 669 577 869 526 781 682 797 RNA recognition motif domain (AHRD V3.3 *-* A0A200QK79_9MAGN) AT5G55670 Solyc07g065530.1 454 11166 6613 10715 21069 15486 16293 21393 6989 4337 7127 9835 1000 3722 3662 flocculation protein FLO11 (AHRD V3.3 *** XP_004244068.1) Solyc07g065540.1 0 56 39 149 399 359 250 543 30 41 62 79 22 27 2 Fasciclin-like arabinogalactan protein (AHRD V3.3 *** A0A2R6P548_ACTCH) AT5G55730 Solyc07g065550.3 162 148 233 170 209 187 188 162 174 159 185 142 142 123 178 NAD-dependent protein deacetylase SRT1 (AHRD V3.3 *** A0A1U8HDF6_CAPAN) AT5G55760 Solyc07g065560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone H2B-like (AHRD V3.3 *-* A0A2I4FMY6_9ROSI) Solyc07g065563.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B1 (AHRD V3.3 *-* G0TEQ3_TRIMO) Solyc07g065567.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B1 (AHRD V3.3 *-* G0TEQ3_TRIMO) Solyc07g065570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B (AHRD V3.3 *-* A0A2G2X323_CAPBA) Solyc07g065580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B1 (AHRD V3.3 *-* G0TEQ3_TRIMO) Solyc07g065590.4 82 67 56 65 101 103 98 99 61 62 51 58 87 85 81 Nicotinamide-nucleotide adenylyltransferase (AHRD V3.3 *** A0A2G2X950_CAPBA) AT5G55810 Solyc07g065600.3 393 850 1023 1151 1595 1839 1619 1675 1026 697 1350 1096 354 912 735 Inner centromere protein, ARK-binding region protein (AHRD V3.3 *-* A0A1P8BE82_ARATH) AT5G55820 Solyc07g065610.1 28 101 106 117 194 210 261 175 106 65 82 134 39 37 47 Pkinase domain-containing protein/Lectin_legB domain-containing protein (AHRD V3.3 *-* A0A1Q3BLU0_CEPFO) AT5G55830 Solyc07g065620.4 515 406 455 446 440 392 454 493 427 421 285 442 492 507 360 Poly(A)-specific ribonuclease PARN (AHRD V3.3 *** A0A2G2WFF7_CAPBA) AT1G55870 Solyc07g065630.4 3274 2992 3071 3413 2434 2775 2970 2741 4328 3158 2912 2958 2766 3609 3322 E3 ubiquitin-protein ligase UPL2 (AHRD V3.3 *** A0A2G3C2F6_CAPCH) AT1G55860 Solyc07g065640.3 750 482 595 687 523 609 591 453 594 659 768 551 523 525 763 RPM1-interacting protein 4 (AHRD V3.3 *** A0A2G3CUK4_CAPCH) AT2G04410 Solyc07g065650.2 989 1223 1180 730 1076 738 738 839 1032 1012 841 839 1472 1103 1014 Transmembrane emp24 domain-containing protein p24beta2 (AHRD V3.3 *** A0A1U8HLP9_CAPAN) AT3G07680 Solyc07g065660.4 20 24 21 5 11 37 26 13 51 35 11 44 57 31 15 Cellulose synthase-like protein E1 (AHRD V3.3 *** A0A2G2Z684_CAPAN) AT1G55850 Solyc07g065670.1 26 7 16 4 15 30 21 15 8 11 32 7 4 10 43 Cellulose synthase-like protein E1 (AHRD V3.3 *-* A0A2G3C2E8_CAPCH) Solyc07g065680.3 1323 1194 1309 1119 1367 1264 1172 1269 1734 1088 1537 1262 1588 1448 1375 WEB family protein (AHRD V3.3 *** A0A1U8HJQ2_CAPAN) AT5G55860 Solyc07g065690.3 470 510 534 547 702 632 693 680 431 404 493 581 599 567 375 Altered inheritance of mitochondria protein 32 (AHRD V3.3 *** A0A1J3FUJ2_NOCCA) AT4G26620 Solyc07g065700.4 1447 1124 1662 1354 1058 1160 1054 926 1210 1168 1594 1109 1457 1210 2026 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1NTZ9_ARTAN) AT1G55840 Solyc07g065710.3 1957 2222 2206 2094 2040 2231 2115 2478 2228 1959 2140 2058 1996 2078 1731 Protein kinase G11A (AHRD V3.3 *** A0A2G2WFE7_CAPBA) Solyc07g065720.4 77 114 143 189 202 220 179 157 135 70 188 138 143 195 127 complex 1 protein%2C LYR family protein (AHRD V3.3 *** AT5G51960.2) AT5G51960 Solyc07g065730.1 47 72 38 86 44 33 34 60 80 35 70 53 116 118 131 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R9Y9_9MAGN) Solyc07g065740.3 334 300 185 270 274 202 184 212 198 286 214 222 245 219 238 transmembrane protein (DUF872) (AHRD V3.3 *** AT3G29170.2) AT3G29170 Solyc07g065745.1 99 139 234 248 205 202 266 241 255 219 191 171 166 215 535 GBF-interacting protein 1-like (AHRD V3.3 *-* A0A2I4FNQ4_9ROSI) Solyc07g065760.3 369 282 264 258 229 198 195 183 308 228 207 260 278 354 275 Coiled-coil protein (AHRD V3.3 *** F4I1X8_ARATH) AT1G55830 Solyc07g065770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter G family member 26 (AHRD V3.3 *-* A0A2G2WFF4_CAPBA) Solyc07g065780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter-like (AHRD V3.3 *** A0A200RAL3_9MAGN) AT3G13220 Solyc07g065790.2 732 454 371 457 399 374 339 319 456 640 646 466 435 375 559 Transmembrane protein C9orf5 protein (AHRD V3.3 *** Q93XX1_ARATH) AT5G55960 Solyc07g065800.3 811 805 762 714 731 650 607 689 829 717 686 685 848 832 873 Cwf15 / Cwc15 cell cycle control family protein (AHRD V3.3 *** Q9LK52_ARATH) Solyc07g065810.2 1 3 5 4 0 1 1 3 3 3 0 2 0 2 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QJE6_ARTAN) AT5G55970 Solyc07g065820.3 329 437 547 559 388 389 391 337 482 341 512 354 513 496 564 Calcineurin B-like protein (AHRD V3.3 *** C3TRS0_MAIZE) AT5G55990 Solyc07g065830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Unknown protein Solyc07g065840.2 112735 83105 54246 57542 49501 58551 44458 47016 57161 58483 53535 58579 58807 56906 52766 molecular chaperone Hsp90-2 AT5G56010 Solyc07g065845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) Solyc07g065850.3 318 421 432 371 369 407 464 418 382 511 388 334 568 424 389 Vesicle transport protein (AHRD V3.3 *** A0A2G3C2D6_CAPCH) AT4G26550 Solyc07g065860.3 51 53 70 56 31 34 16 16 44 38 55 57 80 50 70 Receptor protein kinase, putative (AHRD V3.3 *** B9T1Q4_RICCO) AT4G26540 Solyc07g065870.3 219 212 277 222 342 331 330 314 259 228 236 285 272 335 242 Regulatory protein RecX (AHRD V3.3 *** A0A200RAJ8_9MAGN) Solyc07g065880.4 67 241 164 379 279 298 348 324 276 186 349 201 152 203 611 Kinesin KP1 (AHRD V3.3 *** A0A2G2WFS9_CAPBA) AT3G44730 Solyc07g065890.3 197 571 473 377 685 594 639 558 495 428 630 391 472 445 533 Uridine kinase (AHRD V3.3 *** A0A2G3C2E2_CAPCH) AT1G55810 Solyc07g065900.3 198 136 38 57 8 4 6 1 25 20 35 7 57 44 228 Fructose-bisphosphate aldolase (AHRD V3.3 *** A0A200Q3T9_9MAGN) AT4G26530 Solyc07g065910.1 83 35 49 63 41 20 25 16 21 21 18 16 42 48 65 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q56Y59_ARATH) AT4G26490 Solyc07g065920.4 2552 991 1285 1711 1553 1341 1307 1486 1322 1874 1578 1641 1042 781 1448 Heavy metal-associated isoprenylated plant protein 41 (AHRD V3.3 *-* A0A2P4JR90_QUESU) AT1G55800 Solyc07g065923.1 1 0 2 3 2 3 4 6 1 3 1 0 0 0 8 Heavy metal-associated isoprenylated plant protein 47 (AHRD V3.3 -** A0A314Z745_PRUYE) Solyc07g065927.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heavy metal-associated isoprenylated plant protein 47 (AHRD V3.3 *-* A0A314Z745_PRUYE) AT3G07600 Solyc07g065930.3 437 285 497 532 265 242 296 204 239 303 502 195 266 525 1770 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A1U8HLU2_CAPAN) AT1G55760 Solyc07g065940.1 36 14 36 45 47 54 76 64 31 74 54 60 11 25 19 transmembrane protein (AHRD V3.3 *-* AT3G13275.1) AT3G13275 Solyc07g065950.4 3776 3901 2623 3069 3642 3046 3091 4618 3805 4337 2501 3409 2997 3443 2450 enhancer of mRNA-decapping protein 4-like (AHRD V3.3 *-* A0A2I4F2H1_9ROSI) Solyc07g065960.1 54 126 112 102 279 194 238 195 120 102 115 115 129 170 105 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G3C2H4_CAPCH) AT3G13310 Solyc07g065970.1 114 79 174 97 211 201 240 145 95 141 145 122 50 78 100 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G3C2H4_CAPCH) AT3G13310 Solyc07g065980.3 227 269 215 176 302 284 314 304 182 167 237 118 241 414 1007 alkaline alpha-galactosidase seed imbibition protein AT1G55740 Solyc07g065990.1 134 24 2 9 2 1 1 10 8 15 4 15 17 41 63 oleosin S1-2-like (AHRD V3.3 *** XP_010324233.1) Solyc07g066000.3 15 24 16 28 10 26 26 23 55 24 17 41 30 35 18 Amino acid permease (AHRD V3.3 *** A0A2K3JXJ9_TRIPR) Solyc07g066010.3 714 1044 1260 1799 1516 1801 1966 1296 1894 1370 1188 1571 1444 1411 1331 Amino acid transporter (AHRD V3.3 *** A0A200RAG5_9MAGN) AT5G23810 Solyc07g066020.2 187 105 277 253 141 164 195 172 209 226 234 247 141 173 211 Amino acid permease (AHRD V3.3 *** S8CYC9_9LAMI) Solyc07g066030.4 2566 2709 2417 2537 1953 1910 2078 2383 3676 3281 1989 2720 3216 3428 2290 Proteasome activator subunit 4 (AHRD V3.3 *** A0A2G2WFP4_CAPBA) AT3G13330 Solyc07g066040.1 152 869 944 1782 2592 2813 3159 2863 913 726 860 1644 136 697 443 RNA polymerase II elongation factor (AHRD V3.3 *** AT5G56120.1) AT5G56120 Solyc07g066050.4 600 3886 7118 9729 13270 17783 17943 10634 3953 2537 9466 6761 714 3557 4896 Unknown protein Solyc07g066060.3 149 322 294 273 358 348 416 385 384 237 171 364 378 312 257 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1QLT6_ARTAN) AT5G56130 Solyc07g066070.3 1956 1025 1229 1148 932 1010 939 903 1118 1920 1836 1150 909 1067 1788 KH domain-containing protein (AHRD V3.3 *** A0A1U8HDP0_CAPAN) AT5G56140 Solyc07g066080.3 1623 1194 1017 1233 822 614 482 748 941 1370 814 875 2147 1699 1283 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QCU7_9MAGN) Solyc07g066090.4 564 760 799 811 765 843 850 872 820 590 626 738 776 1052 851 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1LV34_ARTAN) AT1G55690 Solyc07g066100.3 339 622 737 684 655 732 871 668 575 555 900 550 423 429 422 GPI-anchored protein LORELEI (AHRD V3.3 *** A0A2I4E3L7_9ROSI) AT5G56170 Solyc07g066110.1 4 0 1 5 0 6 0 0 1 0 0 0 0 4 6 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RAE4_9MAGN) Solyc07g066120.3 919 660 463 624 607 584 605 645 797 897 554 728 605 530 625 Actin (AHRD V3.3 *** A0A2G9HV56_9LAMI) AT5G56180 Solyc07g066130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** Q9C5N4_ARATH) Solyc07g066140.1 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** F4K6D8_ARATH) Solyc07g066150.1 1261 2987 2148 6716 5493 3580 3909 4866 2996 4982 2653 2897 2273 2492 2267 Photosystem I reaction center subunit V, chloroplastic (AHRD V3.3 *** A0A1U8HDK9_CAPAN) AT1G55670 Solyc07g066160.1 6 3 0 8 0 1 1 1 1 3 3 0 16 2 0 Zinc finger, C2H2-like protein (AHRD V3.3 *** A0A2U1L2J3_ARTAN) Solyc07g066170.4 574 422 375 458 333 404 373 327 298 336 517 326 400 353 430 WPP domain-interacting protein AT5G56210 Solyc07g066180.2 340 183 148 178 185 252 239 391 135 347 282 297 56 130 106 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT5G56220.2) AT5G56220 Solyc07g066190.3 96 112 87 118 114 136 137 135 96 146 97 90 61 75 98 PRA1 family protein (AHRD V3.3 *** A0A2G2Z637_CAPAN) AT5G56230 Solyc07g066200.4 3060 2018 1849 1929 2248 2474 2379 2258 2310 2406 2383 1960 1851 1955 1863 hapless protein (AHRD V3.3 *-* AT5G56240.4) AT5G56250 Solyc07g066210.3 670 668 581 530 614 566 528 651 738 755 590 727 676 694 800 Chloride channel protein (AHRD V3.3 *** Q9ARC6_SOLLC) AT1G55620 Solyc07g066220.3 5624 3517 3696 3698 2882 2936 3063 2776 3409 4136 4587 2717 4207 3822 5890 WRKY transcription factor 2 AT5G56270 Solyc07g066230.4 295 226 232 476 67 102 73 95 176 218 309 152 345 243 473 receptor-like protein kinase BRI1-like 3 (AHRD V3.3 *** A0A1U8HLY5_CAPAN) AT1G55610 Solyc07g066240.3 324 385 392 467 381 423 407 357 333 291 370 352 332 412 417 F-box protein (AHRD V3.3 *** A0A2I0VKR1_9ASPA) AT1G55590 Solyc07g066250.1 169 133 268 190 208 182 179 221 56 149 89 319 51 97 59 lateral suppresser AT1G55580 Solyc07g066260.3 793 750 1057 721 583 671 748 553 642 513 811 650 591 797 960 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1PF73_ARTAN) AT1G16220 Solyc07g066270.4 377 508 324 418 504 521 524 585 539 550 358 539 512 435 353 6-phosphogluconolactonase (AHRD V3.3 *** A6MD23_ORYBR) AT5G24400 Solyc07g066280.3 366 315 300 311 275 439 339 270 298 302 443 354 258 352 357 Release factor glutamine methyltransferase (AHRD V3.3 *** A0A1J3GKD1_NOCCA) AT5G64150 Solyc07g066290.3 2427 2015 2475 2336 2427 2670 2632 2053 2187 1798 2467 1909 2157 2377 2784 Chaperone dnaJ-domain containing protein (AHRD V3.3 *** A0A2K3P614_TRIPR) AT1G79030 Solyc07g066300.4 677 605 564 575 658 730 750 700 594 428 385 492 604 713 508 Unknown protein Solyc07g066310.3 6524 4607 3464 3638 4746 5055 4339 4497 5089 4599 3285 3291 3668 2200 3555 Photosystem II 10 kDa polypeptide, chloroplastic (AHRD V3.3 *** A0A2G3C3G4_CAPCH) AT1G79040 Solyc07g066320.3 472 574 689 603 509 590 546 445 689 480 561 707 560 627 514 Protein RecA (AHRD V3.3 *** A0A2G2Z6B8_CAPAN) AT1G79050 Solyc07g066330.3 100 37 14 13 0 1 0 2 0 25 6 0 13 3 0 NAC domain-containing protein (AHRD V3.3 *** A0A2G2WGF8_CAPBA) AT1G56010 Solyc07g066340.3 640 545 513 631 642 718 719 607 350 400 398 569 316 439 302 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G16650.1) AT1G16650 Solyc07g066350.1 1500 1640 1968 1992 3001 3074 2805 2777 1448 2041 1495 2946 1091 1597 1033 serine/arginine repetitive matrix-like protein (AHRD V3.3 *** AT1G56020.1) AT1G79060 Solyc07g066360.1 13 15 43 82 5 5 5 13 6 15 43 15 68 108 58 proline-rich receptor-like protein kinase PERK2 (AHRD V3.3 --* XP_015959884.1) Solyc07g066370.3 617 410 511 511 521 499 498 407 395 463 478 402 376 431 509 SNARE-associated protein-like protein (AHRD V3.3 *** AT1G79070.2) AT1G79070 Solyc07g066380.4 414 950 1140 1299 1018 1459 1663 1023 655 560 910 828 1205 1150 874 Unknown protein Solyc07g066390.1 138 113 172 131 211 172 183 180 167 136 130 141 72 125 78 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QE10_9MAGN) AT1G79080 Solyc07g066400.1 0 0 0 2 0 5 0 0 0 1 0 0 0 2 18 seed maturation protein (AHRD V3.3 *-* AT3G12960.1) Solyc07g066410.4 1569 1332 966 764 542 643 685 645 688 706 734 707 1221 1248 1061 WD repeat-containing protein 75 (AHRD V3.3 *** A0A2I4H3K8_9ROSI) AT2G18900 Solyc07g066420.4 743 657 539 464 398 461 478 518 576 400 543 498 637 683 721 Peptidyl-prolyl cis-trans isomerase-like 4 (AHRD V3.3 *** A0A2G2WGD2_CAPBA) AT1G53720 Solyc07g066430.3 472 1072 1251 1141 1077 1301 1253 866 653 568 1185 883 1274 1579 1200 Ribosome-binding ATPase YchF (AHRD V3.3 *** A0A1J3HW77_NOCCA) AT1G56050 Solyc07g066440.4 650 574 508 568 716 763 790 821 666 551 573 606 534 665 684 Trypsin family protein (AHRD V3.3 *** A0A2U1MFG3_ARTAN) Solyc07g066450.4 880 405 542 541 475 605 519 512 456 597 537 550 483 601 527 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A178VI87_ARATH) AT3G12940 Solyc07g066460.3 276 585 549 527 659 541 687 630 592 423 659 580 405 644 707 Protein Iojap/ribosomal silencing factor RsfS (AHRD V3.3 *** A0A200R040_9MAGN) AT3G12930 Solyc07g066470.3 1218 2354 2028 2001 3332 3238 3821 3228 2138 1484 1809 2018 1580 2108 2037 Porphobilinogen deaminase, chloroplastic (AHRD V3.3 *** A0A2G2Z6B1_CAPAN) AT5G08280 Solyc07g066480.3 845 600 627 811 554 493 544 405 753 697 796 549 673 682 894 flacca AT1G16540 Solyc07g066510.4 42 137 200 310 178 104 122 69 76 76 84 40 264 185 313 Zinc finger protein CONSTANS-LIKE 3 (AHRD V3.3 *-* A0A1J3GS04_NOCCA) AT3G12890 Solyc07g066520.3 1778 1290 1510 1539 1329 1298 1290 1628 1097 1864 1400 1588 1428 1457 1214 interactor of constitutive active ROPs protein (AHRD V3.3 *** AT1G16520.1) AT1G16520 Solyc07g066530.4 237 173 177 154 154 151 183 147 176 117 163 156 153 162 229 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT1G56090.2) AT1G56090 Solyc07g066540.1 41 347 448 530 812 1113 1000 886 255 206 411 477 79 218 183 transmembrane protein (AHRD V3.3 *** AT3G12870.1) AT3G12870 Solyc07g066550.4 260 123 82 92 78 62 80 77 94 91 92 55 53 82 70 SHR5-receptor-like kinase (AHRD V3.3 *** Q4PLL4_9POAL) AT1G56140 Solyc07g066560.1 651 294 565 344 132 121 106 89 121 197 490 194 610 232 336 Small auxin up-regulated RNA65 AT3G12830 Solyc07g066570.4 785 648 833 812 551 596 456 463 581 540 759 667 698 602 966 Filamentous hemagglutinin transporter (AHRD V3.3 *** Q84JL6_ARATH) AT1G79160 Solyc07g066580.3 860 1055 1049 880 950 1028 920 927 871 947 837 945 1494 1346 1009 Sulfurtransferase (AHRD V3.3 *** A0A2G2WFU6_CAPBA) AT1G79230 Solyc07g066590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc07g066600.3 4882 8428 6503 6710 7563 6863 6260 8377 8949 7093 5157 7627 8268 7624 7181 Phosphoglycerate kinase (AHRD V3.3 *** A0A2G3C3B1_CAPCH) AT1G79550 Solyc07g066610.3 2349 5671 4200 5412 7915 6653 6314 9391 6585 7771 4280 6213 3676 3716 4184 Phosphoglycerate kinase (AHRD V3.3 *** A0A2G2Z688_CAPAN) AT1G56190 Solyc07g066620.3 483 390 339 472 344 388 391 320 405 436 433 426 405 416 411 ATP-dependent zinc metalloprotease (AHRD V3.3 *** Q9C7J3_ARATH) AT1G56180 Solyc07g066630.4 1236 1287 1251 1073 1220 1102 1089 1209 1437 1369 1226 1338 1202 1003 1113 Peroxisomal 2,4-dienoyl-CoA reductase (AHRD V3.3 *** A0A2G2WFW0_CAPBA),Pfam:PF13561 AT3G12800 Solyc07g066640.3 7 9 15 15 3 7 6 14 5 2 9 3 4 2 2 transglycosylase (AHRD V3.3 *** AT1G16290.2) AT1G16290 Solyc07g066650.4 3077 1711 1835 1624 1850 1498 1475 1595 1728 2187 2007 1740 1615 1527 2045 Defective in cullin neddylation protein (AHRD V3.3 *** Q09K05_TOBAC) AT3G12760 Solyc07g066660.4 787 1025 961 959 1205 1403 1379 1477 1021 778 829 1024 794 1055 744 cyclinB3_1 AT1G16330 Solyc08g004000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g004005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g005000.4 652 4213 3060 3433 7451 6400 5677 7859 4251 1966 3355 5615 1582 2507 1182 Glucan endo-1,3-beta-glucosidase 3 (AHRD V3.3 *** A0A1J3GQV0_NOCCA) Solyc08g005010.4 1361 944 750 905 685 783 947 726 844 1048 690 651 812 655 841 CAAX amino terminal protease (AHRD V3.3 *** A0A200PSV1_9MAGN) AT2G35260 Solyc08g150100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 microspore-specific promoter 2 (AHRD V3.3 --* AT5G46795.1) AT5G46795 Solyc08g005020.3 1860 2419 2575 1560 2227 1998 1742 2449 2010 1312 1833 1827 2530 2288 2032 nucleolin (AHRD V3.3 *** XP_010324462.1) AT1G47970 Solyc08g005030.3 781 707 806 803 662 688 805 657 561 712 665 627 728 771 646 Splicing factor 3B subunit 5 (AHRD V3.3 *-* A0A2G3CEV9_CAPCH) Solyc08g005040.1 0 2 2 2 0 0 0 0 0 0 0 0 0 0 1 hypothetical protein (AHRD V3.3 *** AT5G46770.1) AT5G46770 Solyc08g005050.4 655 553 941 513 496 542 360 412 835 612 1293 614 799 597 1027 transcription factor MYC2 (AHRD V3.3 *-* R4S7B4_NICAT) Solyc08g005060.3 144 211 171 159 219 227 206 226 168 108 163 179 191 195 182 cobalt ion binding protein (AHRD V3.3 *** AT1G71310.2) AT1G71310 Solyc08g005070.4 962 1131 1097 1132 1127 1076 1137 1250 1264 1519 1399 1100 1012 967 1498 Arf GTPase activating protein (AHRD V3.3 *** A0A200QXI9_9MAGN) Solyc08g005080.2 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G2XLB4_CAPBA) Solyc08g005090.2 29 62 60 54 82 70 71 39 73 37 44 40 81 69 84 DUF740 domain-containing protein (AHRD V3.3 *** A0A1Q3BKH7_CEPFO) Solyc08g005100.3 26 36 20 50 25 19 20 22 25 14 33 5 32 18 34 PLATZ transcription factor family protein (AHRD V3.3 *** F4IEB6_ARATH) AT1G32700 Solyc08g005110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1N0W0_ARTAN) Solyc08g005120.3 6 3 1 6 0 1 0 0 2 2 1 1 2 13 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *-* A0A2U1LGD5_ARTAN) Solyc08g005130.1 67 61 118 77 173 128 111 149 181 124 229 98 134 72 35 Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** A0A1U8EUP7_CAPAN) AT5G16760 Solyc08g005140.3 388 203 153 189 86 131 164 150 137 155 196 140 193 162 168 Protein kinase superfamily protein (AHRD V3.3 *** Q94K14_ARATH) AT5G26110 Solyc08g005150.3 573 368 403 409 278 349 386 293 338 308 306 240 361 417 443 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2XWS5_CAPAN) AT1G32340 Solyc08g005160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g005170.3 1241 879 769 991 827 841 813 800 816 884 736 801 954 925 918 Heat shock factor protein HSF8 (AHRD V3.3 *** HSF8_SOLPE) AT1G32330 Solyc08g005180.2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase FKBP53 (AHRD V3.3 *-* A0A2G3DG18_CAPCH) Solyc08g005190.4 2354 1604 1727 1256 1039 1516 1436 1057 1328 1202 1597 1300 1276 1625 2337 Pre-mRNA-splicing factor CWC22-like protein (AHRD V3.3 *** A0A2G3BQE7_CAPCH) AT1G80930 Solyc08g005200.3 566 511 522 511 530 571 567 533 531 468 479 556 406 492 638 Syntaxin (AHRD V3.3 *** A0A2G3BQD2_CAPCH) AT5G46860 Solyc08g005210.3 86 180 139 207 202 167 196 101 125 122 133 135 160 168 258 Dolichol phosphate-mannose biosynthesis regulatory protein (AHRD V3.3 *** A0A1U8F412_CAPAN) AT1G74340 Solyc08g005220.4 144 126 172 141 146 146 118 157 200 196 127 165 149 111 161 Plastid lipid-associated protein chloroplastic-like (AHRD V3.3 *** A0A2K3PR63_TRIPR) AT2G35490 Solyc08g005230.3 5170 3083 2279 2407 1947 2118 1780 2103 2553 2499 2045 2211 2795 2223 2026 DUF1664 domain-containing protein (AHRD V3.3 *** A0A1Q3CXR7_CEPFO) AT1G27000 Solyc08g005240.3 111 180 285 327 552 573 547 490 296 181 156 368 95 214 135 Transcription factor jumonji (Jmj) family protein / zinc finger (C5HC2 type) family protein (AHRD V3.3 *** F4KIX0_ARATH) AT5G46910 Solyc08g005245.1 35 59 250 110 210 305 266 180 74 52 232 122 38 79 120 Unknown protein Solyc08g005260.2 212 319 310 380 408 316 300 285 236 210 257 193 324 286 347 Homeodomain-like superfamily protein (AHRD V3.3 *** A0A2U1QD82_ARTAN) AT1G32240 Solyc08g005270.3 4740 2974 2494 2190 1792 2030 2018 1662 2496 2927 2572 2076 2555 2707 2778 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A2G2W3V7_CAPBA) AT1G32230 Solyc08g005275.1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 Unknown protein Solyc08g005280.2 45 58 128 60 38 67 59 49 61 35 51 37 22 28 23 Cellulose synthase (AHRD V3.3 *** A0A2U1KRA4_ARTAN) Solyc08g005290.3 722 530 506 592 631 575 576 585 657 571 492 559 743 761 530 bZIP transcription factor 16-like (AHRD V3.3 *** A0A2I4H7V6_9ROSI) AT2G35530 Solyc08g005300.3 1219 1155 1598 956 1027 1261 1253 1184 1298 681 1906 1007 793 1096 2072 DnaJ domain (AHRD V3.3 *-* A0A200PXA9_9MAGN) AT2G35540 Solyc08g005310.4 942 804 621 788 1133 1094 1163 1210 934 870 703 854 671 800 564 Extra-large guanine nucleotide-binding protein 3 (AHRD V3.3 *-* A0A2G3ANN7_CAPAN) Solyc08g005320.3 38 23 35 20 14 25 19 18 19 9 10 17 44 30 20 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *** A0A2G2XLG4_CAPBA) Solyc08g005330.2 0 0 1 0 0 1 1 0 1 0 0 0 1 0 0 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *** A0A2G2XLG4_CAPBA) Solyc08g005333.1 129 138 77 171 94 77 81 108 75 111 25 35 133 129 91 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *** A0A2G2XLG4_CAPBA) Solyc08g005335.1 356 254 271 337 212 277 310 165 155 160 244 111 380 299 257 Unknown protein Solyc08g005337.1 0 4 1 0 0 2 1 3 0 0 0 0 1 0 0 F-box/RNI-like superfamily protein (AHRD V3.3 *** A0A2H1ZEG0_ARATH) Solyc08g005370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *** A0A2G2XLG4_CAPBA) Solyc08g005380.2 1 0 10 2 0 1 1 3 1 2 0 0 4 0 0 S-protein homolog 29-like (AHRD V3.3 -** XP_022019767.1) Solyc08g005390.1 19 65 32 57 79 96 85 58 47 41 21 57 60 35 43 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PU14_9MAGN) Solyc08g005400.4 391 1245 1086 1068 2065 1956 2104 2211 1297 803 1154 1323 1063 1181 992 DNA (Cytosine-5)-methyltransferase CMT2 (AHRD V3.3 *** A0A2G3ANN9_CAPAN) Solyc08g005410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A2G3BQA7_CAPCH) Solyc08g005420.3 42 115 130 130 186 250 284 133 136 102 123 102 58 79 140 cell division cycle 20.2, cofactor of APC complex-like (AHRD V3.3 *** A0A2I4FBA0_9ROSI) Solyc08g005430.3 4689 2524 2674 2256 2262 2530 2272 2225 2027 2584 2481 2694 2395 2430 1775 Growth-regulating factor 4 (AHRD V3.3 *** A0A2G3BQA5_CAPCH) Solyc08g005440.3 326 437 496 418 594 582 669 550 630 520 506 458 727 388 378 Disease resistance protein (AHRD V3.3 *** A0A200QXA3_9MAGN) AT3G07040 Solyc08g005450.3 5756 2919 3252 2387 2420 2648 2066 2401 3351 2151 3393 2293 2524 2542 5203 CAX-interacting protein 4 (AHRD V3.3 *-* A0A2G3ANM6_CAPAN) AT2G28910 Solyc08g005460.3 65 111 121 88 109 116 125 90 133 103 102 115 102 133 104 Protein BREVIS RADIX (AHRD V3.3 *** A0A1U8F2S0_CAPAN) AT1G31880 Solyc08g005470.4 3052 2272 2458 2779 2061 2517 2541 2129 2314 2254 2327 2134 2084 2294 3293 Serine/threonine-protein kinase MAK (AHRD V3.3 *** A0A2G2XLD7_CAPBA) AT4G19110 Solyc08g005480.3 291 323 131 290 306 191 206 297 258 322 187 267 187 267 200 Unknown protein Solyc08g005490.3 2325 2704 3306 3347 2422 2853 2750 2190 3086 2365 3837 1953 3042 2845 4372 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1NU97_ARTAN) AT1G31850 Solyc08g005500.4 6 3 5 6 5 5 5 3 4 2 1 4 5 15 1 NBS-LRR protein (AHRD V3.3 *** Q9SM52_SOLAC) Solyc08g005510.3 35 20 10 28 10 17 14 11 10 9 17 8 7 19 46 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3NQB9_TRIPR) Solyc08g005520.3 322 478 502 358 482 554 510 538 450 278 477 432 560 496 500 Ankyrin repeat (AHRD V3.3 *** A0A200QXM0_9MAGN) AT4G19150 Solyc08g150101.1 25 12 16 16 9 7 3 6 8 11 13 1 7 16 10 Unknown protein Solyc08g005540.2 17 63 76 100 57 50 50 44 71 28 71 36 85 99 116 Polyamine transporter PUT1 (AHRD V3.3 *** A0A2G2XLF3_CAPBA) AT1G31830 Solyc08g005550.4 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 alternative oxidase 1c Solyc08g005560.3 169 101 195 262 120 106 104 101 221 196 270 181 85 226 433 transglutaminase family protein (AHRD V3.3 *** AT4G19160.2) AT4G19160 Solyc08g005570.4 555 590 498 506 539 581 629 513 444 495 520 548 652 655 509 Root UVB sensitive family (AHRD V3.3 *** A0A2U1QLM3_ARTAN) AT3G45890 Solyc08g005580.3 190 461 870 1427 268 237 264 103 340 437 716 137 485 480 878 ABC transporter G family member 14 (AHRD V3.3 *** A0A2G2W3Y1_CAPBA) AT1G31770 Solyc08g005590.4 839 1346 1442 1267 1758 1760 1695 1761 953 1050 1308 1435 1602 1192 1015 SWIb domain-containing protein (AHRD V3.3 *** Q6V9I4_SOLCH) AT2G35605 Solyc08g005600.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g005610.3 377 197 792 126 11 8 11 5 68 115 1643 134 46 167 239 Cytochrome P450 (AHRD V3.3 *** A0A200R6R4_9MAGN) AT5G45340 Solyc08g005620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin-regulated protein (AHRD V3.3 *** K0E174_POPTO) Solyc08g005630.3 121 106 213 199 60 39 36 28 131 147 291 151 76 133 61 Long-chain-alcohol oxidase (AHRD V3.3 *** R9R6I9_SOLLC) AT4G19380 Solyc08g005635.1 7 13 0 26 29 20 32 20 16 7 0 13 23 16 2 Terpene synthase (AHRD V3.3 *-* G5CV51_SOLLC) Solyc08g005640.4 63 202 91 193 403 493 612 426 318 100 224 257 233 337 275 Terpene synthase (AHRD V3.3 *** G5CV51_SOLLC) Solyc08g005650.3 269 1150 496 806 1272 955 1016 1092 1697 830 557 1011 1118 1197 1053 Cytochrome P450-1 (AHRD V3.3 *** K4CI56_SOLLC) Solyc08g005655.1 20 61 67 133 161 175 198 110 193 28 101 91 109 131 172 Alkyl transferase (AHRD V3.3 *** K7WQ45_SOLLC) Solyc08g005670.2 3 4 35 13 1 23 9 5 22 16 115 49 5 6 4 Phellandrene synthase Solyc08g005673.1 0 0 5 1 0 0 0 0 0 0 16 4 1 0 0 Alkyl transferase (AHRD V3.3 *** R9R6P8_SOLLC) Solyc08g005677.1 12 11 62 32 54 49 45 61 115 67 346 156 62 59 34 Terpene synthase (AHRD V3.3 *** G5CV36_SOLLC) Solyc08g005680.4 0 10 24 43 7 14 9 6 26 34 195 46 6 6 14 Z,Z-farnesyl pyrophosphate synthase Solyc08g005690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g005700.1 301 239 111 333 100 115 106 59 111 114 219 133 264 250 391 Unknown protein Solyc08g005705.1 4 4 5 0 0 1 0 0 5 2 6 2 5 13 14 Terpene synthase 41 (AHRD V3.3 *-* R9R6S4_SOLLC) Solyc08g005710.3 62 65 87 65 25 21 28 6 46 36 124 59 47 88 46 Terpene synthase 41 (AHRD V3.3 *** R9R6F5_SOLPI) Solyc08g005720.4 1 3 1 5 10 11 19 10 18 2 8 10 5 19 8 Terpene synthase 18 (AHRD V3.3 *** R9R6F3_SOLLC) Solyc08g150102.1 0 0 0 0 1 2 1 2 6 4 0 2 4 4 6 Cytochrome P450-2 (AHRD V3.3 *-* R9R6P9_SOLPI) Solyc08g005750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Benzyl alcohol O-benzoyltransferase (AHRD V3.3 *-* A0A2U1NMB0_ARTAN) Solyc08g005760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol acyl transferase (AHRD V3.3 *** Q6QLX4_SOLLC) Solyc08g005770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 alcohol acyl transferase Solyc08g005780.4 288 450 407 418 514 545 598 650 521 428 371 609 354 364 415 Beta-amylase (AHRD V3.3 *** A0A2G3AP00_CAPAN) AT5G45300 Solyc08g005790.3 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Pectin acetylesterase (AHRD V3.3 *** K4CI68_SOLLC) Solyc08g005800.4 1379 4539 5288 5169 4148 3636 3693 4450 5529 5112 6232 3963 3055 3253 8189 Pectin acetylesterase (AHRD V3.3 *** A0A1U8F2I8_CAPAN) Solyc08g005810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 aspartic proteinase CDR1-like (AHRD V3.3 *** A0A1U7VXN6_NICSY) Solyc08g005820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 aspartic proteinase CDR1-like (AHRD V3.3 *** A0A1U8G735_CAPAN) Solyc08g005830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 aspartic proteinase CDR1-like (AHRD V3.3 *** A0A1S4BAW3_TOBAC) Solyc08g005840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 aspartic proteinase CDR1-like (AHRD V3.3 *** A0A1S4C281_TOBAC) Solyc08g005860.3 221 264 223 308 312 289 315 283 238 239 221 326 288 239 298 Putrescine-binding periplasmic protein-related protein (AHRD V3.3 *** A0A2U1PSD6_ARTAN) AT1G31410 Solyc08g005870.2 5 172 73 60 479 548 560 410 159 93 167 178 81 111 27 R2R3MYB transcription factor 8 Solyc08g005880.4 1 14 18 10 20 51 40 40 10 5 8 18 8 21 9 Protein DETOXIFICATION (AHRD V3.3 *** A0A200QTG9_9MAGN) AT1G33110 Solyc08g005890.3 0 10 1 2 14 24 22 34 8 9 0 3 1 2 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2K3L8P7_TRIPR) AT5G67150 Solyc08g005900.4 317 339 298 171 300 356 328 263 302 220 359 274 404 345 237 Trihelix transcription factor GT-3b-like protein (AHRD V3.3 *** A0A2K3PCN5_TRIPR) Solyc08g005910.3 5227 2885 2906 3149 2478 2616 2390 1934 2424 2723 2865 2839 2878 2860 2660 Ankyrin repeat (AHRD V3.3 *** A0A200R6W7_9MAGN) AT5G61230 Solyc08g005920.3 260 195 165 166 195 193 158 163 231 203 138 161 203 199 268 Mediator of RNA polymerase II transcription subunit 28 (AHRD V3.3 *** A0A2G2XM67_CAPBA) AT3G52860 Solyc08g005930.1 19 32 37 27 60 47 68 64 24 36 7 34 15 13 24 F-box/kelch-repeat protein SKIP25 (AHRD V3.3 *** A0A2G2XM52_CAPBA) AT1G31350 Solyc08g005940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Proteinase inhibitor (AHRD V3.3 *-* Q40378_NICAL) Solyc08g005950.2 0 0 2 0 0 1 0 1 1 0 10 0 7 1 3 guanine nucleotide-binding protein subunit gamma 2-like (AHRD V3.3 *** A0A2I4GP70_9ROSI) Solyc08g005960.2 2 8 18 172 1 1 2 7 15 2 0 1 1 6 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) AT2G45180 Solyc08g005970.3 7502 4830 3006 2938 2553 2359 2575 2778 2374 2597 1959 2940 3500 3386 2666 Protein arginine N-methyltransferase (AHRD V3.3 *** A0A1U8FFB2_CAPAN) AT4G31120 Solyc08g005980.3 247 543 481 393 472 387 383 520 370 390 327 467 452 459 358 High-affinity nickel-transport family protein (AHRD V3.3 *** F4JM82_ARATH) AT2G16800 Solyc08g005985.1 277 233 305 278 295 353 304 288 185 179 300 232 249 216 254 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (AHRD V3.3 *** C5IGX5_SOLTU) AT4G38570 Solyc08g006000.3 2838 1480 1722 1880 1858 1460 1469 1529 1718 2671 1957 1993 1417 1474 1724 keratin-associated protein (DUF1218) (AHRD V3.3 *** AT4G31130.1) AT4G31130 Solyc08g006010.3 203 132 103 144 122 100 89 81 120 162 98 142 155 158 130 WD-40 repeat containing protein (AHRD V3.3 *** A0A0K0XR07_TOBAC) AT3G62770 Solyc08g006020.4 2 0 3 4 0 0 0 0 1 2 0 0 0 0 27 NAC domain-containing protein (AHRD V3.3 *** A0A2G3AGF8_CAPAN) AT2G24430 Solyc08g006030.4 232 646 595 649 869 778 736 785 756 440 477 515 603 598 596 Myosin heavy chain-related protein (AHRD V3.3 *** A0A2U1NGZ8_ARTAN) AT4G31340 Solyc08g006040.3 2522 4588 3887 2941 3408 3369 3283 3115 2740 2449 2969 2597 4880 4251 3209 40S ribosomal protein S6 (AHRD V3.3 *** A0A2G3AGN0_CAPAN) AT5G10360 Solyc08g006050.2 64 63 52 30 53 32 29 32 49 28 7 39 42 49 28 Embryo defective 1303 (AHRD V3.3 *-* A8MS46_ARATH) AT1G56200 Solyc08g006060.3 898 643 485 508 440 454 482 478 582 573 519 477 639 563 730 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1P9P3_ARTAN) AT2G25070 Solyc08g006070.4 57 164 249 199 217 266 275 220 141 143 241 154 157 177 217 AIG2-like protein (AHRD V3.3 *** A0A2I4GNX8_9ROSI) AT4G31310 Solyc08g006080.1 87 94 64 206 91 113 115 178 93 180 57 119 67 90 72 Glycosyltransferase family protein 64 C3 (AHRD V3.3 *** A0A2G3BQ69_CAPCH) AT1G80290 Solyc08g006090.3 432 446 495 473 467 459 545 429 405 364 480 316 626 464 504 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2G2W455_CAPBA) AT1G01940 Solyc08g006100.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 plant/protein (Protein of unknown function%2C DUF599) (AHRD V3.3 *** AT5G10580.4) AT4G31330 Solyc08g006110.4 2956 1355 1426 1651 1166 854 704 862 907 1032 1017 569 2231 1376 1666 Basic leucine zipper 9-like transcription factor (AHRD V3.3 *** A0A2K3PFC6_TRIPR) AT5G24800 Solyc08g006120.3 131 117 179 142 117 109 147 118 103 86 121 124 151 146 163 mitochondrial import inner membrane translocase subunit Tim16 (AHRD V3.3 *** A0A2I4HS40_9ROSI),Pfam:PF03656 AT3G59280 Solyc08g006130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g006140.3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *** A0A200QZ79_9MAGN) AT2G24370 Solyc08g006150.3 2149 1695 2963 2683 2155 2550 2187 2003 2422 2294 3660 2749 1540 1933 2609 Gamma-glutamylcyclotransferase (AHRD V3.3 *** A0A2G2W469_CAPBA) AT5G26220 Solyc08g006160.4 291 461 181 320 553 608 616 643 284 520 199 340 385 169 119 Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** A0A2U1N400_ARTAN) AT5G19940 Solyc08g006170.1 440 397 303 865 507 434 587 542 330 748 254 419 422 429 296 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3ANR7_CAPAN) AT2G36240 Solyc08g006180.4 118 106 80 91 127 105 96 100 91 86 78 127 123 116 95 F-box protein (AHRD V3.3 *** A0A2I0VRT6_9ASPA) Solyc08g006190.3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcriptional factor B3 family protein (AHRD V3.3 *** A0A1P8AVV7_ARATH) AT1G26680 Solyc08g006200.3 1 23 16 33 41 30 25 27 11 6 17 22 18 24 5 Transcriptional factor B3 family protein (AHRD V3.3 *-* A0A1P8AVV7_ARATH) AT1G26680 Solyc08g006210.3 108 69 28 37 56 59 33 64 30 24 37 71 70 63 17 Transcriptional factor B3 family protein (AHRD V3.3 *** A0A1P8AYS0_ARATH) AT1G26680 Solyc08g006220.4 247 234 133 208 225 247 272 197 219 151 231 240 151 236 158 Transcriptional factor B3 family protein (AHRD V3.3 *-* A0A1P8AYS0_ARATH) Solyc08g006230.4 358 249 275 214 209 293 317 156 154 154 260 191 196 283 238 Transcriptional factor B3 family protein (AHRD V3.3 *** A0A2H1ZEQ2_ARATH) Solyc08g006240.3 25 58 72 39 279 205 211 280 71 48 69 128 79 72 55 Transcriptional factor B3 family protein (AHRD V3.3 *-* A0A1P8AVV7_ARATH) AT1G26680 Solyc08g006250.2 203 189 129 167 132 223 161 155 152 157 197 132 127 168 125 Copper transporter (AHRD V3.3 *** E9LK44_VITVI) Solyc08g006253.1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc08g006255.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc08g006257.1 7 2 7 5 1 8 6 3 2 4 1 3 4 2 14 Unknown protein Solyc08g006270.1 237 228 262 364 329 356 380 374 368 295 201 405 153 258 172 Transcriptional factor B3 family protein (AHRD V3.3 *** A0A1P8B798_ARATH) Solyc08g006280.2 4 6 0 23 52 65 137 77 1 34 2 0 47 14 25 Transcriptional factor B3 family protein (AHRD V3.3 *-* A0A1P8AYQ9_ARATH) Solyc08g006290.3 0 7 5 3 0 0 2 1 0 0 0 0 2 3 0 fasciclin-like arabinogalactan protein 3 (AHRD V3.3 *-* A0A1S4A8S1_TOBAC) Solyc08g006295.1 0 0 14 9 0 0 2 1 0 0 0 0 0 0 0 fasciclin-like arabinogalactan protein 3 (AHRD V3.3 *** A0A2G3ANK1_CAPAN) AT2G24450 Solyc08g006310.3 406 784 642 1003 956 938 1124 940 881 1083 1042 959 535 545 702 Cellulose synthase-like C4, glycosyltransferase family 2 (AHRD V3.3 *** A9TYJ5_PHYPA) AT4G31590 Solyc08g006320.4 1415 1273 2491 1404 841 875 792 815 1357 1096 2380 1099 1443 1167 2137 WRKY transcription factor 11 AT4G31550 Solyc08g006330.3 115 48 28 21 28 19 21 20 50 56 39 14 92 39 68 UDP-xylose phenolic glycosyltransferase AT1G05675 Solyc08g006350.3 105 95 54 111 69 96 110 86 114 94 193 87 88 81 195 Glycosyltransferase (AHRD V3.3 *** B9VJL9_9SOLA) AT1G05675 Solyc08g006360.3 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** B9VJL9_9SOLA) Solyc08g006370.1 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Glycosyltransferase (AHRD V3.3 *-* B9VJL9_9SOLA) Solyc08g006390.1 5 0 0 3 0 0 0 0 0 1 0 0 4 0 8 Glycosyltransferase (AHRD V3.3 *-* B9VJL9_9SOLA) Solyc08g006400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* B9VJL9_9SOLA) Solyc08g006410.4 68 189 38 46 91 68 73 60 75 85 25 25 223 61 42 Glycosyltransferase (AHRD V3.3 *** B9VJL9_9SOLA) AT1G05675 Solyc08g006420.3 1150 973 812 967 802 1061 1248 901 1163 678 977 743 674 993 1141 nucleoporin (AHRD V3.3 *** AT4G31570.3) AT4G31570 Solyc08g006430.4 2701 2762 2053 2312 1741 2063 2196 1821 1636 1853 2029 1945 2931 2469 2085 Sarcosine oxidase (AHRD V3.3 *** S8E567_9LAMI) AT2G24580 Solyc08g006440.4 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 Plant calmodulin-binding protein-related (AHRD V3.3 *-* K7W1Y3_MAIZE) Solyc08g006450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 extensin-like (AHRD V3.3 *** XP_010324670.1) Solyc08g006460.3 669 367 221 339 234 244 196 226 243 500 286 302 204 214 228 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8BF19_ARATH) AT5G10650 Solyc08g006470.4 2206 939 405 330 12 19 20 15 262 1706 434 174 3740 587 1006 Zinc finger protein (AHRD V3.3 *** A0A2U1NTB4_ARTAN) Solyc08g006480.3 1411 1401 1119 1076 1244 1123 1214 1405 1289 1225 851 1333 1528 1339 713 flocculation protein (AHRD V3.3 *-* AT4G31430.3) AT4G31430 Solyc08g006483.1 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 Transcriptional factor B3 family protein (AHRD V3.3 *** A0A2H1ZEQ2_ARATH) Solyc08g006487.1 290 153 116 152 107 113 79 105 197 246 199 128 129 133 161 GDSL esterase/lipase (AHRD V3.3 *** A0A199UFA2_ANACO) Solyc08g006500.4 149 109 107 91 84 117 102 55 117 81 141 47 136 91 92 glutamate receptor-like 2.6 AT2G29110 Solyc08g006510.3 342 360 410 452 412 353 352 416 430 339 410 345 347 349 679 Rossmann-fold NAD(P)-binding domain-containing protein (AHRD V3.3 *** G5DW32_SILLA) AT5G10730 Solyc08g006520.1 82 16 15 30 52 31 30 31 14 21 7 6 13 21 81 Protein GLUTAMINE DUMPER 4 (AHRD V3.3 *** A0A2G3BQN0_CAPCH) AT4G31730 Solyc08g006530.4 2882 2626 1286 1564 2784 1995 2064 2842 2691 3716 1750 2660 2626 1785 1577 Zinc finger protein CONSTANS-LIKE 4 (AHRD V3.3 *** A0A2G2W4F6_CAPBA) AT5G24930 Solyc08g006540.4 110 277 293 305 388 333 347 327 245 203 188 261 308 322 297 FK506 binding protein 13 AT5G45680 Solyc08g006550.4 47 310 298 473 669 662 703 587 275 195 290 388 97 192 163 Rop guanine nucleotide exchange factor 5 (AHRD V3.3 *** A0A1U8H3J1_CAPAN) AT5G05940 Solyc08g006560.3 5 0 12 14 0 1 0 0 13 4 32 11 3 3 6 3-oxoacyl-[acyl-carrier-protein] synthase 3 (AHRD V3.3 *** A0A2U1LL37_ARTAN) Solyc08g006570.4 660 564 958 578 583 697 647 428 567 419 809 531 729 697 1208 anaphase-promoting complex subunit 13 (AHRD V3.3 --* XP_012091793.1) Solyc08g006580.3 94 161 228 185 264 273 241 157 92 97 186 153 161 213 244 Unknown protein AT5G10745 Solyc08g006590.2 137 133 262 130 116 140 110 86 120 100 222 87 82 104 112 protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A2I4G6J8_9ROSI) AT5G10750 Solyc08g006600.4 794 427 553 595 355 287 308 323 393 500 479 285 580 555 644 Dynamin-related protein 3A (AHRD V3.3 *** A0A2G3BQP9_CAPCH) Solyc08g006610.3 326 223 242 150 266 237 229 190 184 225 165 197 133 195 278 polyphosphatidylinositol phosphatase (AHRD V3.3 *** AT2G45320.1) AT2G45320 Solyc08g006620.3 141 115 208 136 128 146 180 160 131 175 169 149 153 113 176 DnaJ/Hsp40 cysteine-rich domain superfamily protein (AHRD V3.3 *** AT2G24860.1) AT2G24860 Solyc08g006630.3 11 75 51 41 88 66 65 68 42 29 18 56 34 72 50 spindle and kinetochore-associated protein 2 isoform X2 (AHRD V3.3 *** A0A2I4G6M5_9ROSI) AT2G24970 Solyc08g006640.3 946 1498 1424 1327 1882 2042 2064 1908 1226 1337 2146 1461 1362 1388 1253 monogalactosyldiacylglycerol synthase, chloroplastic (AHRD V3.3 *** A0A2I4G6M8_9ROSI) AT4G31780 Solyc08g006650.3 759 1229 1249 1329 1245 1626 1635 1075 979 928 1348 916 1509 1469 1389 ER membrane protein complex subunit 4-like (AHRD V3.3 *** A0A2I4G6N1_9ROSI) AT5G10780 Solyc08g006660.2 555 850 671 767 948 918 929 1157 955 898 588 835 794 735 627 Conserved oligomeric Golgi complex subunit 2 (AHRD V3.3 *** A0A1J3DP33_NOCCA) AT4G24840 Solyc08g006670.3 1647 909 826 702 639 546 525 543 655 978 870 818 758 756 914 mediator of RNA polymerase II transcription subunit 30-like (AHRD V3.3 *** A0A2I4EZZ4_9ROSI) AT5G63480 Solyc08g006680.3 249 244 363 330 225 314 293 219 272 236 337 202 239 260 282 Major facilitator superfamily protein (AHRD V3.3 *** F4KIL9_ARATH) AT5G25050 Solyc08g006690.1 66 15 62 64 135 94 100 61 45 38 276 67 39 97 147 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A2U1NV02_ARTAN) AT3G62820 Solyc08g006700.3 1814 1144 1179 965 872 920 881 913 754 1376 1368 889 1211 1044 1400 Enhancer of rudimentary-like protein (AHRD V3.3 *** A0A2G2Y1B7_CAPAN) AT5G10810 Solyc08g006710.3 54 100 152 149 58 63 53 48 112 117 174 75 31 106 124 Unknown protein Solyc08g006720.4 758 731 409 716 877 560 673 764 875 814 482 749 563 443 573 Glutathione peroxidase (AHRD V3.3 *** A0A1U8EXY8_CAPAN) AT4G31870 Solyc08g006730.1 9 40 52 19 88 71 50 47 164 38 44 82 30 43 67 Tyramine N-feruloyltransferase 10/30 (AHRD V3.3 *** A0A2G2VBA1_CAPBA) Solyc08g006740.3 17 3 1 5 0 0 1 0 52 8 0 5 0 17 15 aromatic amino acid decarboxylase 2 Solyc08g006750.4 2 94 5 10 11 9 7 9 104 44 5 33 20 17 13 Serine decarboxylase (AHRD V3.3 *** A0A1U8F8Y3_CAPAN) Solyc08g006760.4 215 228 439 343 318 391 450 259 252 288 460 257 206 265 270 Unknown protein Solyc08g006765.1 300 242 785 614 3 13 16 3 334 680 889 149 195 530 670 N-acetyltransferase (AHRD V3.3 *** B6T916_MAIZE) Solyc08g006770.3 1488 774 1977 2104 168 100 88 44 1705 2443 1839 1134 1517 2575 2349 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MCV6_ARTAN) Solyc08g006780.3 240 257 371 286 239 168 169 148 293 328 300 252 222 306 227 Nucleoid-associated protein (AHRD V3.3 *** A0A1J3J8Y5_NOCCA) AT4G30620 Solyc08g006790.4 139 1247 1030 1401 2057 2197 1077 2913 1212 573 955 1800 155 729 537 Early nodulin-like protein 3 (AHRD V3.3 *** A0A2G3AND2_CAPAN) AT4G31840 Solyc08g006800.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 *** AT4G31830.1) AT4G31830 Solyc08g006810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 fasciclin-like arabinogalactan protein 14 (AHRD V3.3 *-* A0A1U8FEP5_CAPAN) Solyc08g006820.4 247 791 747 839 1120 1131 1265 1263 864 771 781 1032 676 809 512 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G3BR15_CAPCH) AT5G10840 Solyc08g006830.3 129 104 180 111 179 194 217 158 136 87 89 114 112 138 180 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** A0A1Y1IA85_KLENI) AT3G62000 Solyc08g006840.3 652 1313 620 866 1360 1012 1031 1420 992 995 597 1011 1150 1140 615 30S ribosomal protein S15 (AHRD V3.3 *** A0A1J3FWH7_NOCCA) AT1G80620 Solyc08g006850.4 0 0 1 16 9 2 5 3 161 1 41 21 2 1 0 Patatin (AHRD V3.3 *** PAT0_SOLTU) Solyc08g006860.3 0 0 0 0 3 24 15 5 2 0 1 14 0 0 0 Patatin (AHRD V3.3 *** PAT0_SOLTU) Solyc08g006870.4 1562 1156 1067 842 577 681 561 652 994 1153 938 1030 1071 1177 931 BTB/POZ domain-containing protein NPY1 (AHRD V3.3 *** A0A1U8EPQ5_CAPAN) AT4G31820 Solyc08g006880.3 2838 2761 1791 1772 1826 1755 1742 2235 2472 2720 1572 1956 3644 2839 2262 ABC transporter (AHRD V3.3 *** A0A200R061_9MAGN) AT2G34660 Solyc08g006890.3 32312 83741 68211 84109 123208 115592 123026 122594 65436 65003 66055 87367 74250 88440 85533 Tubulin alpha chain (AHRD V3.3 *** A0A1U8GD16_CAPAN) AT4G14960 Solyc08g006900.3 1654 3139 3210 1888 2026 2130 2232 1867 1665 1285 2178 1848 3911 3254 2952 60S ribosomal protein L32 (AHRD V3.3 *** A0A2G3DDM0_CAPCH) AT4G18100 Solyc08g006903.1 35 38 47 39 50 41 54 53 37 39 35 41 10 32 27 Unknown protein Solyc08g006907.1 62 45 57 18 29 29 40 41 43 32 23 29 16 46 26 Unknown protein Solyc08g006910.4 422 298 388 359 221 289 401 246 266 191 369 275 284 474 505 transcriptional corepressor LEUNIG-like (AHRD V3.3 *** A0A2I4H8H0_9ROSI) Solyc08g006920.3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 F-box protein SKIP19-like (AHRD V3.3 *-* A0A2I4GUY1_9ROSI) Solyc08g006930.3 1007 1444 1124 1239 2538 2218 2381 2386 1561 1808 1346 1331 1081 918 1242 photosystem I reaction center subunit psaK, chloroplastic (AHRD V3.3 *** A0A2G3AN63_CAPAN) AT1G30380 Solyc08g006940.4 955 1278 1281 1331 1455 1431 1414 1387 1144 1083 1134 1236 1334 1239 1178 F-box protein SKIP19-like (AHRD V3.3 *** A0A2I4GUY1_9ROSI) AT4G05460 Solyc08g006950.4 263 496 339 583 602 498 509 689 536 694 288 671 472 484 175 AT-hook motif nuclear-localized protein 8-like (AHRD V3.3 *** A0A2I4DIF4_9ROSI) Solyc08g006960.3 712 930 768 934 1012 953 1030 942 1028 840 830 1026 1095 1050 820 AP-2 complex subunit mu (AHRD V3.3 *** A0A2G2W3I9_CAPBA) AT5G46630 Solyc08g006970.4 342 161 173 164 180 191 164 188 162 181 160 205 251 211 263 Plant intracellular Ras-group-related LRR protein (AHRD V3.3 *** A0A2R6PDI6_ACTCH) Solyc08g006980.3 1488 1434 1567 1404 1567 1627 1532 1583 1912 1332 1372 1373 1935 1896 1439 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LIK0_ARTAN) AT2G35330 Solyc08g006990.3 6 12 1 15 1 2 2 0 2 7 3 3 22 2 2 Aluminum activated malate transporter family protein (AHRD V3.3 *** A0A2U1QG27_ARTAN) AT4G17970 Solyc08g007000.3 411 589 535 641 686 911 790 666 545 375 582 666 365 575 519 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1P5P3_ARTAN) AT2G35350 Solyc08g007010.4 502 595 512 619 616 561 542 623 631 594 448 541 588 432 507 Fe-S cluster assembly protein (AHRD V3.3 *** A0A140B483_PRUPE) AT1G32500 Solyc08g007015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain (AHRD V3.3 *-* A0A200PSY2_9MAGN) Solyc08g007030.3 382 298 345 321 333 386 328 276 278 246 516 204 330 351 434 ubiquitin family protein (AHRD V3.3 *** AT2G35360.1) AT2G35360 Solyc08g007040.3 44 227 384 212 464 372 419 349 289 141 361 214 132 131 434 Glycine cleavage system H protein (AHRD V3.3 *** A0A2G2W3F1_CAPBA) AT2G35370 Solyc08g007050.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200PPF3_9MAGN) Solyc08g007060.4 182 100 232 506 0 4 4 2 16 202 546 25 210 38 147 Protein NRT1/ PTR FAMILY 7.3 (AHRD V3.3 *** A0A2G3BPK6_CAPCH) Solyc08g007070.2 22 20 4 16 23 25 36 18 27 23 6 4 23 24 29 Unknown protein Solyc08g007080.4 21 10 26 20 1 7 5 5 9 16 20 15 11 25 15 type I inositol polyphosphate 5-phosphatase 2-like (AHRD V3.3 *** A0A2I4GAB5_9ROSI) AT4G18010 Solyc08g007090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Expansin-like B1 (AHRD V3.3 *-* A0A2G2W3G6_CAPBA) Solyc08g007100.4 194 112 148 137 74 142 105 77 108 100 193 82 130 126 169 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1KV95_ARTAN),Pfam:PF13419 AT2G38740 Solyc08g007110.4 4474 3946 3161 3399 3320 3553 3704 4028 3750 3668 2936 3513 3584 4067 3467 Regulator of nonsense transcripts 1 (AHRD V3.3 *** A0A2G2W3F6_CAPBA) AT5G47010 Solyc08g007120.3 16 27 36 55 53 75 70 52 57 36 50 52 11 21 8 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** Q8LCK5_ARATH) AT1G32740 Solyc08g007130.4 192 87 2 43 65 55 52 76 30 58 0 14 25 5 3 Beta-amylase (AHRD V3.3 *** A0A2G3DCL2_CAPCH) AT4G17090 Solyc08g007140.4 1736 3761 4632 2338 3160 3624 3531 2631 2396 1140 3561 2429 4432 4024 4275 60S ribosomal protein L37a (AHRD V3.3 *** A0A2G3AM54_CAPAN) Solyc08g007150.1 1 1 11 0 0 1 1 2 1 0 0 0 4 5 0 Peroxidase (AHRD V3.3 *** K4CIK2_SOLLC) Solyc08g007160.3 98 75 225 98 59 61 59 55 26 114 103 76 69 78 127 Calcineurin B-like protein (AHRD V3.3 *** A1XCM9_POPEU) Solyc08g007170.1 883 683 588 532 763 611 596 704 880 730 671 770 866 655 666 trihelix transcription factor ASIL2 (AHRD V3.3 *-* A0A2I4EIW4_9ROSI) Solyc08g007180.3 221 361 308 472 575 536 481 521 397 403 318 460 277 322 308 Chlorophyll A-B binding protein (AHRD V3.3 *** A0A200RAS0_9MAGN) AT5G47110 Solyc08g007190.3 793 658 945 977 722 772 716 657 591 654 610 622 846 668 819 GATA transcription factor 26 (AHRD V3.3 *** A0A2G3APK4_CAPAN) AT4G17570 Solyc08g007200.4 5 38 40 58 27 25 26 17 25 16 31 19 12 21 16 Vesicle-associated protein 2-1 (AHRD V3.3 *** A0A1U8FGD1_CAPAN) AT5G47180 Solyc08g007210.4 151 497 483 556 263 235 219 253 552 336 426 525 425 532 468 Transferase domain-containing protein (AHRD V3.3 *** A0A1Q3AZY6_CEPFO) AT5G02890 Solyc08g007220.3 1805 4447 3132 2529 3698 3871 3614 4104 3301 2199 2424 2925 5749 5099 2727 Hyaluronan/mRNA-binding protein (AHRD V3.3 *** A0A200QJ96_9MAGN) Solyc08g007225.1 18 26 33 13 24 18 20 19 13 10 26 7 80 31 17 Phospholipase A1-Ibeta2, chloroplastic (AHRD V3.3 *** A0A2G3BPM7_CAPCH) AT4G16820 Solyc08g007230.3 7 5 25 2 2 10 2 3 7 6 66 7 1 3 2 Ethylene-responsive transcription factor 2 (AHRD V3.3 *** A0A2G3DC56_CAPCH) Solyc08g007240.4 168 77 299 176 91 126 122 110 185 401 557 381 65 201 328 Nudix hydrolase 8 (AHRD V3.3 *** A0A1U8EVF7_CAPAN) AT5G47240 Solyc08g007250.3 12 23 110 43 41 44 35 26 24 33 105 15 15 42 70 Disease resistance protein (AHRD V3.3 *** A0A1J3HCC1_NOCCA) AT4G27190 Solyc08g007255.1 0 0 1 0 0 0 0 3 1 1 3 2 1 0 10 Exostosin family protein (AHRD V3.3 *-* F4JMK5_ARATH) Solyc08g007270.4 165 474 470 529 911 912 1031 637 511 238 1008 409 189 363 388 homeobox-leucine zipper protein HAT4-like (AHRD V3.3 *** A0A2I4G6W7_9ROSI) AT4G16780 Solyc08g007280.2 578 294 559 354 243 462 289 191 307 146 954 239 331 459 1049 Unknown protein Solyc08g007290.3 1 0 0 0 1 6 0 0 0 0 7 0 0 0 0 Unknown protein Solyc08g007300.3 580 411 543 386 348 571 416 273 350 273 548 379 369 523 798 Cyclin-D-binding Myb-like transcription factor 1 (AHRD V3.3 *** A0A1J3E546_NOCCA) AT5G41020 Solyc08g007310.3 284 199 284 281 125 166 189 100 272 212 306 126 168 246 237 Exostosin-like (AHRD V3.3 *** A0A200PV90_9MAGN) AT4G16745 Solyc08g007320.3 180 233 295 279 271 297 274 297 232 251 282 310 375 289 310 Tryptophan RNA-binding attenuator protein-like protein (AHRD V3.3 *** A0A2U1LYZ7_ARTAN) AT4G17420 Solyc08g007330.3 48 127 122 146 89 138 173 118 309 148 279 256 205 228 182 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200Q639_9MAGN) AT4G17380 Solyc08g007340.3 2534 2426 2356 3081 1845 2518 2649 2198 2947 2672 3181 2705 2014 2505 2833 Protein transport protein sec16 (AHRD V3.3 *** A0A2G3AP26_CAPAN) AT5G47490 Solyc08g007350.2 7 17 6 6 10 14 10 20 17 11 10 5 29 14 12 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I4GID7_9ROSI) AT3G12460 Solyc08g007360.3 2392 2104 2158 2254 1695 2163 2340 2004 1693 1795 1933 1630 1664 2043 2012 Protein transport protein sec16 (AHRD V3.3 *** A0A2G3AP26_CAPAN) AT5G47490 Solyc08g007370.3 353 328 345 311 281 256 302 332 283 264 269 327 311 358 230 RNA-binding protein (AHRD V3.3 *-* A0A1Y1IGF8_KLENI) Solyc08g007375.1 52 64 162 173 184 124 198 87 70 39 89 65 134 127 169 Unknown protein Solyc08g007380.4 106 96 205 262 216 304 249 234 124 121 143 192 180 177 223 Histidine triad nucleotide-binding protein 3-like (AHRD V3.3 *** A0A2K3MTB1_TRIPR),Pfam:PF11969 AT4G16566 Solyc08g007390.2 73 129 178 158 114 186 193 151 125 105 133 88 164 137 129 Vesicle-associated protein 1-1 (AHRD V3.3 *** A0A2G3BPQ3_CAPCH) Solyc08g007400.4 341 161 197 165 50 48 91 76 91 198 96 97 132 143 262 autophagy-related protein 8f isoform X2 (AHRD V3.3 *-* XP_010324593.1) Solyc08g007410.4 189 291 337 342 436 418 410 363 217 199 265 191 288 279 282 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein (AHRD V3.3 *** Q940I4_ARATH) AT4G16510 Solyc08g007420.3 145 199 232 223 219 179 179 237 167 129 124 162 269 236 296 LELDH2 L-lactate dehydrogenase AT4G17260 Solyc08g007430.2 66 70 45 59 23 15 8 16 10 40 13 38 27 50 49 NIT2 AT1G12110 Solyc08g150103.1 0 1 2 4 12 9 7 14 1 4 1 13 17 2 0 Auxin-responsive protein SAUR32 (AHRD V3.3 *** A0A2G3BQ18_CAPCH) AT4G22620 Solyc08g007440.2 112 96 117 103 182 165 123 129 122 113 146 129 138 124 120 Squalene/phytoene synthase (AHRD V3.3 *** A0A200QCB2_9MAGN),Pfam:PF00494 AT1G62730 Solyc08g007450.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A061G4W6_THECC) Solyc08g007460.3 454 161 80 33 2 0 0 0 54 38 69 4 345 310 70 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1L4X0_ARTAN) AT1G62790 Solyc08g007470.2 344 179 156 161 134 139 133 143 144 194 155 142 149 196 234 HAT transposon superfamily (AHRD V3.3 *** A0A2U1Q846_ARTAN) Solyc08g007480.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat/KH domain protein (DUF1442) (AHRD V3.3 *** O22136_ARATH) AT2G45360 Solyc08g007490.3 570 896 552 571 801 571 616 596 536 428 502 491 970 751 709 Class I peptide chain release factor (AHRD V3.3 *** AT1G62850.3) Solyc08g007500.3 3 8 14 21 17 10 3 3 7 2 10 0 4 6 11 PPR containing protein (AHRD V3.3 *** AT4G22758.1) AT4G22758 Solyc08g007510.3 177 207 211 134 230 209 177 164 170 155 221 224 155 147 135 Cornichon (AHRD V3.3 *** A0A2U1PBX6_ARTAN) Solyc08g007520.4 276 409 439 397 386 410 481 474 431 289 387 438 605 488 366 Exosome complex component rrp42-like protein (AHRD V3.3 *** A0A2K3P6P7_TRIPR) AT3G07750 Solyc08g007530.4 614 417 488 666 556 569 668 487 412 411 466 453 525 522 666 AT-hook motif nuclear-localized protein 1 (AHRD V3.3 *** A0A2G2W2S9_CAPBA) AT4G12080 Solyc08g007540.3 98 56 46 46 190 170 189 197 55 68 70 108 44 55 60 ACT domain-containing protein (AHRD V3.3 *** A0A1Q3BQZ1_CEPFO) AT1G12420 Solyc08g007550.1 4 7 23 12 21 12 17 10 5 4 9 18 21 19 32 Unknown protein Solyc08g007560.3 0 0 4 1 3 1 4 0 4 1 0 1 0 0 3 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A1U8FN46_CAPAN) AT4G12050 Solyc08g007570.4 140 422 871 679 532 441 667 362 507 493 517 450 633 516 1193 protein LITTLE ZIPPER 2-like (AHRD V3.3 *** A0A2I4GT19_9ROSI) AT2G45450 Solyc08g007580.4 34 106 177 104 131 128 194 127 104 64 104 113 82 109 147 Ycf49-like protein (AHRD V3.3 *** A0A2G2W320_CAPBA) AT4G22830 Solyc08g007590.3 908 1076 728 1142 1154 1202 1088 1299 855 1184 908 1127 1095 931 854 Bile acid:sodium symporter (AHRD V3.3 *** A0A200QBC9_9MAGN) AT4G22840 Solyc08g007600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g007610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g007620.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g007630.1 108 141 123 128 189 162 246 159 200 118 94 148 132 148 199 Disease resistance protein I2 (AHRD V3.3 *** Q9XET3_SOLLC) AT3G14470 Solyc08g007640.1 698 772 839 1942 1170 1149 1448 936 674 988 1128 805 694 793 1375 resistance complex protein I2C-4 Solyc08g007650.1 6 6 15 13 11 20 15 9 4 6 1 3 4 3 21 Subtilisin-like protease (AHRD V3.3 *-* Q9LWA3_SOLLC) Solyc08g007660.2 7 10 51 24 61 92 66 64 13 18 32 7 23 12 24 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g007670.1 61 141 213 254 119 99 94 70 167 102 113 84 173 138 242 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g007680.1 44 188 27 96 136 146 99 100 139 101 113 53 75 104 36 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g007690.1 0 336 93 142 600 495 546 660 202 44 161 185 44 257 64 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g007700.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g007710.3 166 214 158 209 168 204 168 193 178 106 135 161 197 175 96 hypothetical protein (AHRD V3.3 *** AT1G12530.1) AT1G12530 Solyc08g007715.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g007730.2 224 134 127 166 186 216 221 196 180 132 145 160 157 183 248 YTH domain-containing protein (AHRD V3.3 *** A0A1Q3CHK8_CEPFO) AT4G11970 Solyc08g007750.4 518 337 537 518 454 520 525 417 279 259 364 311 385 407 682 YTH domain-containing protein (AHRD V3.3 *** A0A1Q3CHK8_CEPFO) AT4G11970 Solyc08g007760.3 930 644 514 510 481 560 535 482 425 517 473 453 599 543 573 YTH domain-containing protein (AHRD V3.3 *** A0A1Q3CHK8_CEPFO) AT4G11970 Solyc08g007770.4 550 509 520 513 685 721 747 651 668 580 650 606 447 469 703 PGRL1A transmembrane protein (AHRD V3.3 *** A0A0F7GZ28_9ROSI) AT4G22890 Solyc08g007780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Expansin (AHRD V3.3 *** K4CIR5_SOLLC) Solyc08g007790.3 489 566 528 491 588 575 519 725 564 521 426 510 609 504 375 3-hydroxy-3-methylglutaryl coenzyme A synthase AT4G11820 Solyc08g007800.3 59 503 1063 758 376 321 337 264 403 370 458 313 313 214 88 SPX domain-containing protein (AHRD V3.3 *** D7MDY2_ARALL) AT4G22990 Solyc08g007805.1 28 49 23 55 58 55 69 44 41 39 68 53 52 17 101 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B (AHRD V3.3 *** A0A1U8G8P8_CAPAN) Solyc08g007820.1 28 65 886 13 0 0 0 0 2 150 909 113 25 50 159 Dehydration-responsive element-binding protein 1E (AHRD V3.3 *** A0A2G2W337_CAPBA) Solyc08g007830.1 8 60 401 6 0 0 1 0 0 61 122 9 14 15 11 Dehydration-responsive element-binding protein 1E (AHRD V3.3 *** A0A1U8FGE9_CAPAN) Solyc08g007835.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G3AE74_CAPAN) Solyc08g007840.3 0 5 10 0 0 0 0 0 0 1 46 0 0 1 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3AE74_CAPAN) Solyc08g007850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g007860.4 823 969 1048 973 952 1030 1066 1020 1022 997 927 1042 1060 1004 729 Lysophospholipid acyltransferase 1 (AHRD V3.3 *** A0A2G3DBB5_CAPCH) AT1G12640 Solyc08g007863.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1PKS1_ARTAN) Solyc08g007867.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200QUP8_9MAGN) Solyc08g007890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldehyde dehydrogenase family 2 member mitochondrial-like (AHRD V3.3 *-* A0A2K3PGY0_TRIPR) Solyc08g007900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200QUP8_9MAGN) AT1G12740 Solyc08g007910.4 1196 631 622 653 559 536 641 521 518 597 571 498 698 742 779 MAP kinase kinase kinase 61 AT4G23050 Solyc08g007920.2 4 4 7 5 8 0 0 0 12 1 7 1 3 2 1 SUN-like protein 19 Solyc08g007930.2 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 SUN-like protein 20 Solyc08g007940.4 0 2 1 0 0 3 0 0 0 0 0 0 0 0 0 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3AQI7_CEPFO) Solyc08g007950.3 461 643 545 522 593 707 624 644 641 460 429 536 604 643 564 30S ribosomal protein S1 (AHRD V3.3 *** A0A1J3GWB0_NOCCA) AT1G12800 Solyc08g007960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit C-9 (AHRD V3.3 *** A0A2G3AP43_CAPAN) Solyc08g007970.3 86 235 245 142 229 221 290 230 239 121 409 140 108 152 167 Myosin heavy chain-related protein (AHRD V3.3 *** A0A2U1QEA0_ARTAN) AT1G63300 Solyc08g007980.3 8 1 2 3 0 0 0 0 1 0 0 0 0 5 1 LURP-one-like protein (AHRD V3.3 *** A0A1P8AWJ7_ARATH) AT1G63410 Solyc08g007990.3 3249 2956 2448 2025 2298 2544 2342 2267 2330 1904 1904 2304 2427 2453 2509 RNA-binding protein NOB1 (AHRD V3.3 *** A0A2K3NS65_TRIPR) AT5G41190 Solyc08g008000.2 120 77 141 144 90 153 195 91 81 75 121 113 127 138 172 Serine/threonine dehydratase (AHRD V3.3 *** A8J977_CHLRE) AT4G11640 Solyc08g008010.4 199 217 284 362 301 366 387 395 279 257 248 327 269 244 348 Serine/threonine dehydratase (AHRD V3.3 *** A8J977_CHLRE) AT4G11640 Solyc08g008015.1 6 7 3 8 6 10 5 18 9 8 4 18 5 18 0 Unknown protein Solyc08g008020.1 647 907 716 845 1202 1251 1073 1383 565 589 637 1004 426 959 431 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061G6B5_THECC) AT4G11610 Solyc08g008030.3 1225 1187 1467 1447 1516 1835 1784 1521 1002 1105 1168 1415 1107 1503 1240 AT-hook motif nuclear-localized protein 10 (AHRD V3.3 *** A0A2G3AP54_CAPAN) AT1G63470 Solyc08g008040.3 902 972 745 754 802 900 881 797 684 601 688 831 1033 997 669 rRNA-processing PIN domain protein (AHRD V3.3 *** A0A2K3MY48_TRIPR) AT2G34570 Solyc08g008045.1 102 164 194 193 440 350 332 412 158 144 159 217 170 106 76 Aquaporin (AHRD V3.3 *** S5ZH89_MUSAC) AT4G23400 Solyc08g008060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PPY4_ARTAN) Solyc08g008070.1 235 200 265 318 232 280 208 198 215 157 249 225 204 238 184 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2W3D6_CAPBA) AT5G41330 Solyc08g008080.1 69 124 43 119 111 105 113 114 116 47 35 74 40 38 20 RING/U-box superfamily protein (AHRD V3.3 *-* Q3EAE6_ARATH) AT3G61460 Solyc08g008085.1 549 663 639 612 534 567 640 595 649 555 511 563 843 687 533 PB1 domain-containing protein (AHRD V3.3 *** A0A2U1N5Q9_ARTAN) AT1G49920 Solyc08g008110.2 6 17 1 16 0 12 3 1 4 10 7 1 2 4 9 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3 *-* Q9SAZ4_SOLLC) Solyc08g008120.4 1214 738 846 942 599 717 533 548 510 894 743 648 589 643 816 Det1 complexing ubiquitin ligase (AHRD V3.3 *** B6TE26_MAIZE) AT5G41560 Solyc08g008130.4 3119 2225 2468 2611 1965 2092 2193 2025 1837 2015 2627 2169 2012 2599 2583 Zinc finger, MIZ-type, E3 SUMO protein ligase (AHRD V3.3 *-* A0A2U1M2F3_ARTAN) AT5G41580 Solyc08g008140.3 21 14 43 26 27 46 22 12 14 16 41 18 30 33 65 E4 SUMO-protein ligase PIAL2 isoform X2 (AHRD V3.3 *-* XP_010324635.1) Solyc08g008150.1 5 2 0 10 0 0 0 3 2 2 16 2 1 5 5 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *-* A0A2U1NM32_ARTAN) Solyc08g008160.4 612 651 520 492 449 442 409 479 376 350 429 349 689 768 496 WD-repeat protein (AHRD V3.3 *** E5GBV4_CUCME) AT1G29320 Solyc08g008170.4 726 766 786 712 695 732 766 790 823 794 742 828 1189 825 812 Calcium-dependent protein kinase (AHRD V3.3 *** B2KTA5_WHEAT) AT4G23650 Solyc08g008180.3 438 386 926 664 238 274 295 238 369 294 382 285 352 498 1075 protein kinase family protein (AHRD V3.3 *-* AT4G12020.4) AT1G64140 Solyc08g008190.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cation/H(+) antiporter 18 (AHRD V3.3 *** A0A2G2W3C8_CAPBA) Solyc08g008200.3 1 4 1 4 3 3 0 1 4 4 2 3 1 4 9 Cation/H(+) antiporter 18 (AHRD V3.3 *** A0A2G2W3C8_CAPBA) Solyc08g008210.3 1396 2117 1543 1880 2022 1872 2160 1993 1705 1526 1656 1419 2344 1911 1789 vacuolar proton ATPase subunit E AT1G64200 Solyc08g008220.3 28581 17945 13419 12445 9620 9975 9975 10313 9702 11767 14076 11480 15930 15576 16964 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200PUP4_9MAGN) AT5G53300 Solyc08g008230.3 268 443 803 529 599 790 686 437 398 349 893 437 467 449 748 Unknown protein Solyc08g008240.3 14 18 9 11 0 15 7 17 8 5 37 4 11 6 0 Protein kinase family protein (AHRD V3.3 *** Q9FGG5_ARATH) AT1G64300 Solyc08g008250.3 191 327 339 279 272 280 259 253 230 213 217 223 360 334 396 Protein KTI12-like protein (AHRD V3.3 *** A0A2G3BPU8_CAPCH) AT1G13870 Solyc08g008260.2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 myosin heavy chain-like protein (AHRD V3.3 *-* AT5G41780.4) AT1G64320 Solyc08g008270.4 112 199 313 308 265 290 332 246 209 202 271 301 227 268 290 1-acyl-sn-glycerol-3-phosphate acyltransferase (AHRD V3.3 *** AT1G64355.1) AT1G64355 Solyc08g008280.3 1283 377 1585 294 39 48 37 42 199 677 4095 484 265 443 602 WRKY transcription factor 53 AT4G23810 Solyc08g150104.1 3 14 8 24 24 29 19 20 6 20 15 28 15 5 7 Unknown protein Solyc08g008290.3 804 532 422 590 396 373 380 387 605 761 566 492 610 609 1139 Unknown protein AT5G41860 Solyc08g008300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g008305.1 55 148 97 108 43 65 51 37 100 58 186 59 78 62 154 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2W2X0_CAPBA) AT1G64380 Solyc08g008310.3 14 14 24 24 65 70 71 64 70 33 18 68 20 30 13 Long chain acyl-CoA synthetase 2 (AHRD V3.3 *** A0A2G2W2V7_CAPBA) AT4G23850 Solyc08g008320.3 254 414 318 264 200 200 198 203 224 131 208 250 471 398 334 Membrane insertase (AHRD V3.3 *** A0A2U1QMK8_ARTAN) AT5G62050 Solyc08g008330.3 221 478 491 615 713 632 602 608 527 432 696 506 610 542 533 hypothetical protein (AHRD V3.3 *** AT5G24165.2) AT4G23885 Solyc08g008340.4 53 194 186 203 267 213 249 280 215 116 258 197 144 187 164 Nucleoside diphosphate kinase (AHRD V3.3 *** A0A2G3AP96_CAPAN) AT4G11010 Solyc08g008350.3 1352 852 809 704 750 737 880 652 736 671 736 814 856 845 854 ribosome maturation factor (AHRD V3.3 *** AT4G10970.7) AT4G10970 Solyc08g008360.2 9 114 86 128 298 266 295 194 98 87 192 153 102 82 60 UvrABC system protein C (AHRD V3.3 *** A0A2P5ACF6_PARAD) Solyc08g008370.3 1599 659 1465 583 126 190 180 143 402 668 2565 681 848 621 1076 DCD (Development and Cell Death) domain protein (AHRD V3.3 *-* A0A2U1P2J5_ARTAN) AT5G42050 Solyc08g008380.4 591 574 713 897 722 819 868 816 824 731 814 954 548 864 661 Auxin Response Factor 9B AT4G23980 Solyc08g008400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cellulose synthase-like protein G3 (AHRD V3.3 *-* A0A2G3AP89_CAPAN) Solyc08g008410.3 638 572 781 769 597 771 805 694 580 697 946 515 439 707 1074 Plant regulator RWP-RK family protein (AHRD V3.3 *** G7IAL8_MEDTR) AT4G24020 Solyc08g008420.3 366 146 182 180 77 57 48 57 92 177 163 128 70 145 138 Mitochondrial pyruvate carrier (AHRD V3.3 *** A0A1U8GCA8_CAPAN) AT5G20090 Solyc08g008430.4 3 8 15 2 19 5 7 5 6 5 6 4 10 13 4 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1L921_ARTAN),Pfam:PF13561 AT3G03980 Solyc08g008440.2 3 3 5 7 14 10 7 10 7 3 7 11 5 5 12 Unknown protein Solyc08g008450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4GSX7_9ROSI) Solyc08g008453.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* K4A917_SETIT) Solyc08g008457.1 1 8 3 21 2 7 10 7 13 3 8 1 0 23 1 Unknown protein Solyc08g008460.2 684 1109 1030 1017 1454 1303 1272 1559 1483 1007 989 1192 1063 870 929 kinesin light chain-like (AHRD V3.3 *** A0A2I4FU74_9ROSI) Solyc08g008470.2 202 510 312 226 563 408 309 675 724 514 260 536 376 332 295 protein KINESIN LIGHT CHAIN-RELATED 1-like (AHRD V3.3 *-* XP_022871310.1) Solyc08g008480.4 10 20 34 40 31 55 30 31 56 14 37 52 10 14 10 R2R3MYB transcription factor 4 Solyc08g008490.4 1562 946 961 1258 536 554 646 492 754 989 804 632 1093 1128 1632 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PGZ8_ARTAN) Solyc08g008495.1 7 5 7 19 0 0 3 2 6 10 0 1 14 6 28 Zn finger protein (AHRD V3.3 *-* Q43573_TOBAC) Solyc08g008510.3 959 904 765 644 529 616 589 587 758 787 688 659 1192 934 1004 plant UBX domain-containing protein 10-like (AHRD V3.3 *** A0A1S4APS1_TOBAC) AT4G10790 Solyc08g008520.3 194 171 301 238 259 239 248 199 241 204 300 233 204 167 314 Protein yippee-like (AHRD V3.3 *** A0A1Q3BL11_CEPFO) AT4G27745 Solyc08g008530.1 540 989 648 1016 930 668 650 1040 797 858 492 776 860 905 629 Aldehyde-lyase domain (AHRD V3.3 *** A0A200QWC4_9MAGN) AT4G10750 Solyc08g008540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *-* A0A200QWQ1_9MAGN) Solyc08g008550.4 861 429 499 571 106 145 113 144 244 404 332 204 548 322 593 Serine/threonine-protein kinase fray2 (AHRD V3.3 *** A0A2G3BPG3_CAPCH) AT4G24100 Solyc08g008580.3 32 12 2 2 0 22 9 7 1 17 16 6 7 7 8 Methionine gamma-lyase (AHRD V3.3 *** A0A1U8G8Y5_CAPAN) AT1G64660 Solyc08g008590.4 545 1280 786 783 1122 980 1176 1095 753 499 688 733 1908 1508 1011 Ubiquitin (AHRD V3.3 *-* K2RHN1_MACPH) Solyc08g008600.3 0 0 0 1 2 9 6 6 3 1 1 8 0 2 0 bHLH transcription factor 055 Solyc08g008610.3 94 306 387 417 318 429 385 413 357 191 226 361 221 220 222 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LI82_ARTAN) AT4G24140 Solyc08g008620.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2W384_CAPBA) AT5G41890 Solyc08g008630.4 905 924 364 739 799 670 781 738 530 670 365 348 664 335 798 beta-carotene isomerase D27, chloroplastic (AHRD V3.3 *** A0A2I4EYC2_9ROSI) AT1G64680 Solyc08g008640.3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g008650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Seven transmembrane receptor (AHRD V3.3 *-* E5RDD0_CUCME) Solyc08g008660.4 0 3 0 1 0 0 5 0 1 2 0 0 6 0 55 NAC domain-containing protein, putative (AHRD V3.3 *** A0A061G3T7_THECC) Solyc08g008670.3 154 547 577 618 854 776 791 640 415 351 623 450 416 510 476 Phosphomannomutase (AHRD V3.3 *** PMM_SOLLC) AT2G45790 Solyc08g013670.3 669 906 236 647 1765 1377 1446 1590 838 819 295 544 636 171 165 Photosystem I reaction center subunit N, chloroplastic (AHRD V3.3 *** A0A1U8EZE3_CAPAN) AT5G64040 Solyc08g013680.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Soluble inorganic pyrophosphatase (AHRD V3.3 *** A0A2G3BPG8_CAPCH) Solyc08g013690.1 171 49 94 109 57 58 31 38 20 67 110 96 16 74 18 B3 domain-containing protein (AHRD V3.3 *** A0A2G3APE7_CAPAN) AT1G01030 Solyc08g013700.1 24 12 41 41 31 31 13 19 14 22 14 49 4 19 3 B3 domain-containing protein (AHRD V3.3 *** A0A2G3APE7_CAPAN) AT1G01030 Solyc08g013710.4 308 336 493 405 462 580 573 381 318 313 444 358 429 395 404 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* A0A2U1L1N1_ARTAN) AT2G45530 Solyc08g013720.4 48 125 105 99 96 113 132 84 105 99 134 82 57 76 91 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A2U1KR65_ARTAN) Solyc08g013730.3 4475 3112 2799 6589 1608 1594 1424 1507 2896 4982 4722 1466 3863 1901 3863 NOD26-like intrinsic protein5.1 AT4G10380 Solyc08g013740.4 1 10 15 50 10 1 2 0 8 9 25 5 20 1 3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MB89_ARTAN) AT1G33170 Solyc08g013750.3 215 203 266 210 209 221 251 181 195 106 138 203 199 186 233 F-box protein SKIP19 (AHRD V3.3 *-* SKI19_ARATH) Solyc08g013760.1 415 318 340 309 296 289 336 297 245 262 406 224 465 396 305 F-box family protein (AHRD V3.3 *-* A0A2K3MZH1_TRIPR) Solyc08g013780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein skip19-like (AHRD V3.3 *-* A0A2K3P530_TRIPR) Solyc08g013790.2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 F-box protein SKIP19 (AHRD V3.3 *-* A0A1J3D7X0_NOCCA) Solyc08g013800.4 0 0 0 0 6 3 6 2 5 0 12 2 5 0 0 F-box protein SKIP19-like (AHRD V3.3 *** A0A2I4GUY1_9ROSI) Solyc08g013805.2 5 5 11 5 9 7 5 4 10 8 10 5 10 13 1 F-box protein SKIP19-like (AHRD V3.3 *** A0A2I4GUY1_9ROSI) Solyc08g013803.1 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 Unknown protein Solyc08g013807.1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 F-box domain (AHRD V3.3 *-* A0A200PQJ4_9MAGN) Solyc08g013820.3 189 222 217 195 268 296 257 186 188 180 295 209 202 169 227 F-box protein SKIP19-like (AHRD V3.3 *** A0A2I4GUY1_9ROSI) Solyc08g013830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1L3B3_ARTAN) AT1G03390 Solyc08g013840.3 26 114 132 96 237 213 208 170 133 79 110 109 62 79 39 HAD hydrolase (AHRD V3.3 *** A0A200Q5F3_9MAGN),Pfam:PF13419 Solyc08g150105.1 0 0 0 0 0 1 0 0 0 0 0 5 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A288W8G7_GARJA) Solyc08g013850.1 56 59 101 67 113 133 141 172 116 92 91 102 41 118 154 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G3ANC1_CAPAN) AT5G55740 Solyc08g013860.3 1063 1460 1022 1381 1592 1661 1606 1757 1881 1440 1303 1412 1337 1488 1463 Malic enzyme (AHRD V3.3 *** A0A2G3AN52_CAPAN) AT2G13560 Solyc08g013880.4 1210 1380 1500 1495 1688 1929 1936 1937 1402 1461 1401 1610 1397 1448 1232 GPI-anchored protein (AHRD V3.3 *** Q8RWE3_ARATH) AT2G30700 Solyc08g013900.3 433 322 443 536 140 224 162 139 429 592 431 322 597 475 542 Plant regulator RWP-RK family protein (AHRD V3.3 *** G7JDS3_MEDTR) AT2G43500 Solyc08g013910.4 0 13 2 7 2 0 7 4 4 6 3 3 0 2 0 Protein plant cadmium resistance 2 (AHRD V3.3 *-* A0A1J6HUT4_NICAT) Solyc08g013920.3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein PLANT CADMIUM RESISTANCE 2-like (AHRD V3.3 *** A0A1U8FPF0_CAPAN) Solyc08g013930.4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Peroxidase (AHRD V3.3 *** K4CJ27_SOLLC) AT5G24070 Solyc08g013940.3 161 885 710 842 1339 1260 1293 1391 755 450 514 910 438 630 458 Protein kinase family protein (AHRD V3.3 *** A0A2U1Q021_ARTAN) AT5G18700 Solyc08g013950.1 2 0 0 24 6 10 4 3 0 4 0 0 6 17 3 Unknown protein Solyc08g013960.1 0 2 0 3 14 1 1 6 7 0 3 0 1 6 4 disease resistance protein At4g27190-like (AHRD V3.3 *-* A0A2I4ESC1_9ROSI) Solyc08g013970.3 4 12 36 30 19 14 9 11 11 7 37 0 8 10 22 Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *** A0A1P8AW79_ARATH) Solyc08g013980.4 168 322 490 461 534 443 502 385 312 210 372 306 494 369 359 DUF3755 domain-containing protein (AHRD V3.3 *** A0A1Q3BZT7_CEPFO) Solyc08g013990.3 642 479 639 606 698 771 635 754 599 646 565 579 443 465 607 AUGMIN subunit 2-like (AHRD V3.3 *** A0A2I4EYX6_9ROSI) AT2G32980 Solyc08g014000.3 38 434 202 283 305 365 549 346 6752 1049 1271 2011 273 541 257 lipoxygenase A AT1G55020 Solyc08g014010.4 296 138 109 143 41 15 35 25 66 92 102 48 96 157 417 Transmembrane protein (AHRD V3.3 *** Q1PDF2_ARATH) Solyc08g014015.1 170 298 404 397 455 422 450 386 276 216 477 305 379 488 495 Unknown protein Solyc08g014030.1 68 359 177 188 214 221 281 203 313 78 193 110 276 210 367 Transcription factor GRAS (AHRD V3.3 *** A0A2U1MVT2_ARTAN) Solyc08g014035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc08g014040.3 128 176 184 217 187 238 217 246 210 134 216 224 185 197 117 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1LMA1_ARTAN) AT1G73320 Solyc08g014050.2 11 27 89 61 78 89 60 105 31 29 75 71 7 21 14 Glycosyltransferase (AHRD V3.3 *** A0A193AUF6_PUNGR) AT4G15480 Solyc08g014060.4 1134 1248 1015 832 1023 1087 1003 1092 969 876 1090 1083 1143 1085 1069 Eukaryotic translation initiation factor 2A (AHRD V3.3 *** A0A2G2W4L6_CAPBA) AT1G73180 Solyc08g014080.4 449 260 474 410 336 355 318 305 372 403 568 536 267 295 481 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NXA0_ARTAN) Solyc08g014090.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Unknown protein Solyc08g014100.1 262 278 265 483 336 313 347 365 212 242 189 282 414 390 308 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8EU96_CAPAN) AT5G43790 Solyc08g014105.1 4 8 5 14 12 16 6 4 11 5 0 11 13 5 16 Unknown protein Solyc08g014110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g014120.3 933 778 1959 948 740 878 1147 635 1225 745 1625 653 1461 916 753 ethylene responssive protein 33 AT1G05710 Solyc08g014130.3 427 746 855 763 1169 940 1267 1086 935 647 798 920 881 980 702 Isopropylmalate synthase (AHRD V3.3 *** K4CJ46_SOLLC) AT1G74040 Solyc08g014140.1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 Unknown protein Solyc08g014150.4 851 494 500 456 465 390 439 372 437 757 604 445 762 504 546 C2 domain-containing protein/GRAM domain-containing protein (AHRD V3.3 *** A0A1Q3BEV5_CEPFO) AT3G59660 Solyc08g014170.1 4 6 0 2 0 7 1 3 2 3 3 7 7 1 2 C2 domain, GRAM domain protein (AHRD V3.3 *-* A0A2U1PZ96_ARTAN) Solyc08g014175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 Unknown protein Solyc08g014190.4 110 94 220 98 43 36 27 3 53 73 181 40 53 155 137 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A1U8G9M4_CAPAN) AT2G45550 Solyc08g014230.4 2 4 0 0 0 0 0 1 1 0 1 0 0 0 5 Isopropylmalate synthase (AHRD V3.3 *** K4CJ56_SOLLC) Solyc08g014240.4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2-isopropylmalate synthase (AHRD V3.3 *** B2D157_BRAOL) Solyc08g150106.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc08g014245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc08g150107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g014280.3 388 1129 900 1007 1598 1552 1625 1476 921 594 1041 696 875 1016 1271 SUN-like protein 21 AT2G43680 Solyc08g014290.1 190 241 331 217 220 220 150 278 283 253 176 242 435 294 193 Calcineurin-like metallo-phosphoesterase superfamily protein (AHRD V3.3 *** A0A2U1MM52_ARTAN) AT1G18480 Solyc08g014300.4 129 199 281 213 178 200 199 132 158 124 235 151 301 235 174 FAM136A-like protein (DUF842) (AHRD V3.3 *** Q5BQ23_ARATH) AT1G05730 Solyc08g014310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Spermidine synthase (AHRD V3.3 *** A0A088DA02_CAPAN),Pfam:PF01564 Solyc08g014330.3 4 0 12 3 0 4 2 1 3 1 7 1 1 3 3 Amine oxidase (AHRD V3.3 *** A4GZ88_TOBAC) AT2G42490 Solyc08g014340.3 2774 3514 4111 3050 3687 3361 3640 3874 3675 2906 3187 3104 3517 3477 3396 Cysteine synthase (AHRD V3.3 *** S6A7M4_NICAT) AT3G59760 Solyc08g014350.1 1 2 6 16 5 17 2 5 6 14 0 2 0 4 35 transmembrane protein (AHRD V3.3 *** AT5G16250.1) AT5G16250 Solyc08g014360.2 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase (AHRD V3.3 *** A0A1Y1I027_KLENI) Solyc08g014370.1 2234 1531 2082 2817 1393 1144 1085 1266 1570 1665 1988 1268 1889 1544 3747 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *-* Q9SL28_ARATH) Solyc08g014380.3 31 39 48 45 67 57 33 23 65 45 127 46 29 46 49 Pectin acetylesterase (AHRD V3.3 *** K4CJ71_SOLLC) Solyc08g014390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* F6GPY9_NELNU) Solyc08g014393.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc08g014397.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g014420.4 688 963 700 771 975 1009 1074 1057 836 934 673 813 1213 920 721 mitogen-activated protein kinase 2 AT2G43790 Solyc08g014430.3 34 21 37 23 11 19 25 83 15 28 9 3 15 8 20 Formin-like protein (AHRD V3.3 *** A0A2G3BR67_CAPCH) AT2G43800 Solyc08g014440.4 127 131 101 141 100 109 118 123 106 132 96 98 116 111 61 BTB/POZ and TAZ domain-containing protein 3 (AHRD V3.3 *** A0A1U8ET19_CAPAN) AT1G05690 Solyc08g014450.4 296 224 287 305 174 157 216 197 360 231 362 226 257 232 282 Protein kinase domain (AHRD V3.3 *** A0A200QJI2_9MAGN) AT2G43850 Solyc08g014455.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VGK6_9ASPA) ATMG00810 Solyc08g014470.4 504 471 529 487 516 478 497 493 577 484 475 538 433 465 606 Amidohydrolase family (AHRD V3.3 *** A0A2U1PLT8_ARTAN) AT3G55850 Solyc08g014480.4 2078 2178 1840 1830 1909 1779 1884 2084 2771 2790 1862 2242 2673 2358 2001 Beta-galactosidase (AHRD V3.3 *** A0A1J3H0Q0_NOCCA) AT3G54440 Solyc08g014490.1 0 2 0 0 0 2 3 4 0 0 0 0 1 1 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc08g014510.3 517 406 741 607 604 657 646 370 372 389 751 481 439 483 640 Zinc finger protein (AHRD V3.3 *** A0A200PME8_9MAGN) AT1G70650 Solyc08g014515.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc08g014540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** O80559_ARATH) AT2G43890 Solyc08g014550.3 566 894 870 614 845 940 811 676 578 367 728 676 1143 918 710 60S ribosomal protein L9 (AHRD V3.3 *** A0A2G3AX04_CAPCH) AT1G33120 Solyc08g014560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** Q9SLM8_ARATH) AT2G43880 Solyc08g014565.1 5 9 6 0 4 2 6 8 3 3 0 5 0 5 0 Unknown protein Solyc08g014570.3 115 88 211 100 57 72 97 64 82 79 282 53 116 152 128 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A1U8F3K5_CAPAN) AT2G31820 Solyc08g014580.4 18 26 9 17 43 36 32 35 27 12 4 13 5 53 29 type I inositol polyphosphate 5-phosphatase 12-like (AHRD V3.3 *** A0A2I4G632_9ROSI) AT2G43900 Solyc08g014590.2 1 0 2 1 0 9 3 5 1 1 10 2 2 0 0 protein Ycf2-like (AHRD V3.3 *-* A0A1S3Y182_TOBAC) Solyc08g014600.4 170 120 145 153 149 125 166 143 114 126 229 114 125 128 185 Thiocyanate methyltransferase 1 (AHRD V3.3 *** A0A1U8EJ17_CAPAN) AT2G43940 Solyc08g014605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3D5A9_NOCCA) Solyc08g014610.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase (AHRD V3.3 *** D2KZ08_WHEAT) Solyc08g014612.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3M2C0_TRIPR) ATMG00240 Solyc08g014614.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc08g014616.1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *-* A0A2G2VQN3_CAPBA) Solyc08g014618.1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 UB-like protease 1B (AHRD V3.3 --* AT4G00690.1) Solyc08g015620.3 286 361 374 371 398 327 401 307 324 400 392 406 389 308 407 hypothetical protein (AHRD V3.3 *** AT2G43945.1) AT2G43945 Solyc08g015630.3 372 433 477 423 572 525 489 591 419 415 323 543 408 473 339 Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** A0A200PM73_9MAGN) AT2G43980 Solyc08g015631.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3JSN7_NOCCA) Solyc08g015632.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3CN06_NOCCA) Solyc08g150108.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3JSN7_NOCCA) Solyc08g015636.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3JSN7_NOCCA) Solyc08g015638.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X7W9_9ASPA) Solyc08g015640.1 21 14 7 48 15 14 18 8 10 12 16 12 27 13 41 Unknown protein Solyc08g015650.3 697 521 483 498 346 337 354 427 444 614 360 523 721 628 619 la-related protein 6B-like (AHRD V3.3 *** A0A1S3YWP1_TOBAC) AT2G43970 Solyc08g015660.3 243 268 156 296 389 264 282 324 308 279 141 286 353 295 136 6,7-dimethyl-8-ribityllumazine synthase (AHRD V3.3 *** A0A2G2W335_CAPBA) AT2G44050 Solyc08g015670.4 0 0 0 0 2 1 7 1 0 1 0 0 0 0 0 Glucose-1-phosphate adenylyltransferase (AHRD V3.3 *** Q9M4W7_PERFR) AT1G05610 Solyc08g015680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Potassium transporter (AHRD V3.3 *** A0A2G2W316_CAPBA) AT3G02050 Solyc08g015690.4 3518 3930 3908 3578 3953 3899 3832 4015 4806 3888 3500 3682 3939 3820 5037 Late embryogenesis abundant protein (AHRD V3.3 *** A0A2K3L9G4_TRIPR) AT2G44060 Solyc08g015710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *** A0A2G2XLG4_CAPBA) Solyc08g015713.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein At5g03100-like (AHRD V3.3 *-* XP_010324761.2) Solyc08g015715.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *-* A0A2K3LNB5_TRIPR) Solyc08g015717.1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 F-box/LRR-repeat protein 25-like (AHRD V3.3 *-* XP_010324721.1) Solyc08g015730.3 135 85 138 108 129 86 83 69 68 74 79 81 82 135 124 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *** A0A2G2XLG4_CAPBA) Solyc08g015750.3 18 23 15 14 30 23 21 14 22 15 10 17 21 20 0 F-box family protein (AHRD V3.3 *** I0J3G4_ARAHH) Solyc08g015755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc08g015770.4 61 130 210 214 170 215 251 206 110 114 196 221 77 151 81 E3 ubiquitin-protein ligase CCNB1IP1-like protein (AHRD V3.3 *** A0A1U8ESB9_CAPAN) AT1G53490 Solyc08g015780.3 727 810 688 987 936 1057 1024 894 1003 603 704 677 1012 956 1087 Ankyrin repeat protein SKIP35 (AHRD V3.3 *** A0A2G2W349_CAPBA) AT3G59910 Solyc08g015785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g015810.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g015820.1 78 69 34 63 43 36 28 17 26 62 20 58 36 47 35 Unknown protein Solyc08g015830.1 3 1 0 6 0 1 0 0 1 3 0 0 1 7 0 Unknown protein Solyc08g015833.1 3 0 5 13 0 6 1 9 1 8 4 1 5 3 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G2X2A1_CAPBA) Solyc08g015837.1 11 14 9 8 9 7 9 16 10 5 1 6 10 5 0 Transposon, En/Spm-like, Transposase-associated domain protein (AHRD V3.3 *-* A0A2U1N4P4_ARTAN) Solyc08g015840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *-* A0A1U8F3P2_CAPAN) Solyc08g015860.3 1359 1508 1652 1585 1632 1597 1515 1452 1853 1676 1479 1548 2353 1992 1502 Guanosine nucleotide diphosphate dissociation inhibitor (AHRD V3.3 *** A0A1U8DRB7_CAPAN) AT3G59920 Solyc08g015870.3 2674 1346 2381 1686 953 894 859 772 1532 2198 2177 1225 2195 1719 1914 MLO-like protein (AHRD V3.3 *** K4CJB5_SOLLC) AT4G02600 Solyc08g015880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *-* A0A2G2XLG4_CAPBA) Solyc08g015900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *-* A0A2G2XLG4_CAPBA) Solyc08g015905.1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *** A0A2G2XLG4_CAPBA) Solyc08g015930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histidinol-phosphate aminotransferase, chloroplastic (AHRD V3.3 *-* A0A2G2XLG4_CAPBA) Solyc08g015940.3 8 14 17 36 11 4 4 4 8 20 48 7 8 7 63 EPIDERMAL PATTERNING FACTOR-like protein 8 (AHRD V3.3 *** A0A2I4H6E6_9ROSI),Pfam:PF17181 AT1G80133 Solyc08g015960.3 214 411 415 317 363 324 287 339 363 273 286 350 400 325 394 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (AHRD V3.3 *** A0A2G3BRQ1_CAPCH) AT3G59980 Solyc08g015965.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc08g015990.4 610 833 804 790 999 932 943 896 806 755 755 807 1056 942 844 Golgi-to-ER traffic-like protein (AHRD V3.3 *** A0A1P8BH44_ARATH) AT5G63220 Solyc08g016000.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc08g016010.3 841 1012 1057 1033 1364 1281 1337 1352 1294 965 992 1217 968 1015 1135 Apyrase-like protein (AHRD V3.3 *** A0MWC2_TOBAC) AT3G04080 Solyc08g016050.4 1792 1429 1141 1288 1455 1442 1543 1555 1449 1638 1339 1416 1376 1476 1252 Guanine nucleotide exchange factor SPIKE 1 (AHRD V3.3 *** A0A2G3AMT8_CAPAN) AT4G16340 Solyc08g016060.1 130 116 81 107 135 97 150 208 157 231 72 147 91 122 83 Guanine nucleotide exchange factor SPIKE 1 (AHRD V3.3 *-* A0A2G3AMT8_CAPAN) Solyc08g016070.3 400 432 304 252 525 371 336 627 594 537 208 467 303 322 233 Guanine nucleotide exchange factor SPIKE 1 (AHRD V3.3 *-* A0A2G3AMT8_CAPAN) Solyc08g016075.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016080.3 1343 1162 342 721 1246 1351 1268 1274 774 1130 324 723 838 389 398 High chlorophyll fluorescence phenotype 173 (AHRD V3.3 *** Q8W4D6_ARATH) AT1G16720 Solyc08g016090.4 636 608 793 842 835 948 909 691 591 631 1055 689 962 821 1013 transcription factor 25 (AHRD V3.3 *-* A0A2I4FRV3_9ROSI) AT2G46900 Solyc08g016100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Enzyme inhibitor, putative (AHRD V3.3 *** B9RED7_RICCO) AT5G24370 Solyc08g016110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Enzyme inhibitor, putative (AHRD V3.3 *** B9RED7_RICCO) AT5G24370 Solyc08g016120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Enzyme inhibitor, putative (AHRD V3.3 *** B9RED7_RICCO) AT5G24370 Solyc08g016150.1 196 61 78 50 10 3 5 2 20 38 332 30 44 57 61 Avr9/Cf-9 rapidly elicited protein 180 (AHRD V3.3 *** Q9FQZ1_TOBAC) Solyc08g016160.3 8 57 196 141 243 200 127 130 38 72 80 54 44 40 57 cation/H(+) antiporter 15-like (AHRD V3.3 *** A0A2I4GL35_9ROSI) Solyc08g016170.3 429 1414 889 1009 923 856 942 1050 851 727 568 882 1218 1150 949 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** A0A1J7GJV4_LUPAN) AT5G46290 Solyc08g016180.3 3685 6829 5956 4572 6179 5885 5841 5644 4169 3195 4193 4222 7156 6555 5553 60S ribosomal protein L18a (AHRD V3.3 *** A0A2G2WKJ7_CAPBA) AT3G14600 Solyc08g016190.4 215 138 164 214 216 170 208 150 149 174 268 135 152 181 195 60S ribosomal protein L18a-like protein (AHRD V3.3 *** A0A2I4F6G6_9ROSI) AT1G17080 Solyc08g016210.3 392 148 66 117 5 1 1 5 21 58 71 0 326 174 170 LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase GSO1 (AHRD V3.3 *** A0A1U8F7A0_CAPAN) AT1G74170 Solyc08g016220.1 23 9 0 4 0 0 0 1 1 0 23 0 9 3 3 Receptor like protein (AHRD V3.3 *** A0A1S8AD65_CITLI) Solyc08g016250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2G2Y495_CAPAN) Solyc08g016260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2G2W4I0_CAPBA) Solyc08g016270.3 2 0 0 0 0 0 0 0 9 5 54 0 1 2 0 LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase GSO1 (AHRD V3.3 *** A0A1U8F7A0_CAPAN) AT1G74170 Solyc08g016310.3 20 13 35 59 7 6 12 7 29 43 80 9 11 11 99 LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase GSO1 (AHRD V3.3 *** A0A1U8F7A0_CAPAN) AT1G74170 Solyc08g016313.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3CK86_NOCCA) Solyc08g016315.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc08g016317.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2K3M8U7_TRIPR) Solyc08g016340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *-* A0A200PQX9_9MAGN) Solyc08g016350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1Y1HNV9_KLENI) Solyc08g016360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B7R8_ARATH) Solyc08g016380.1 17 14 6 25 11 34 40 50 28 21 0 30 2 7 2 Unknown protein Solyc08g016400.1 36 8 22 12 5 2 14 9 12 12 6 18 22 6 24 Unknown protein Solyc08g016410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016415.1 162 27 105 39 2 2 1 1 30 63 61 23 61 51 54 hypothetical protein (AHRD V3.3 *** AT2G38465.1) AT2G38465 Solyc08g016420.3 369 544 478 406 612 525 526 567 409 291 394 313 932 577 486 prefoldin subunit 6-like (AHRD V3.3 *** A0A2I4EJN6_9ROSI) AT1G29990 Solyc08g016430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016433.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4HAK8_9ROSI) Solyc08g016437.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016500.3 3 17 23 31 19 15 20 6 37 24 40 39 16 31 60 Potassium channel KAT1 (AHRD V3.3 *** A0A2G3BRN2_CAPCH) AT5G46240 Solyc08g016510.3 1038 1543 1784 1651 1799 1837 1878 1783 1492 1373 1264 1621 1856 1656 1676 Proteasome subunit alpha type (AHRD V3.3 *** A0A2G2W582_CAPBA) AT3G14290 Solyc08g016560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ASHR1 (AHRD V3.3 *-* A0A2G2WJX2_CAPBA) Solyc08g016563.1 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc08g016567.1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1NIL2_ARTAN) Solyc08g016570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016580.1 16 28 29 30 42 36 39 32 15 17 48 12 13 18 19 DUF538 domain-containing protein (AHRD V3.3 *** A0A1Q3CGV0_CEPFO) AT5G46230 Solyc08g016583.1 224 92 602 199 248 416 356 181 92 279 242 312 62 112 90 E3 ubiquitin-protein ligase BRE1A-like (AHRD V3.3 --* XP_010314382.1) Solyc08g016587.1 447 174 1088 431 499 797 652 489 262 527 523 645 180 258 276 Unknown protein Solyc08g016620.3 5 7 0 5 1 4 4 1 8 6 2 15 1 6 0 DUF616 domain-containing protein (AHRD V3.3 *** A0A1Q3CH38_CEPFO) AT5G46220 Solyc08g016650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016660.2 0 0 0 6 0 0 3 0 0 2 0 5 1 0 0 Gibberellin 2 oxidase (AHRD V3.3 *** Q53C60_NEROL) AT1G30040 Solyc08g016670.3 623 759 528 462 611 655 600 577 434 366 399 472 991 675 571 calcyclin-binding protein-like (AHRD V3.3 *** A0A2I4DRI6_9ROSI) AT1G30070 Solyc08g016673.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016677.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1KVV7_ARTAN) Solyc08g016720.1 707 751 503 400 377 317 235 384 981 846 765 665 486 767 632 9-cis-epoxycarotenoid dioxygenase2 AT1G30100 Solyc08g016725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3JSN7_NOCCA) Solyc08g016730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *-* A0A200R9B5_9MAGN) Solyc08g016740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine protein kinase (AHRD V3.3 *-* B6TWS7_MAIZE) Solyc08g016750.3 617 1442 621 996 1542 1302 1408 1779 1070 807 545 939 1535 969 710 Pyruvate dehydrogenase E1 component subunit beta-like protein (AHRD V3.3 *** A0A2K3P721_TRIPR) AT2G34590 Solyc08g016760.1 0 0 0 1 0 0 1 5 5 0 0 4 0 1 0 Unknown protein Solyc08g016763.1 7 10 26 6 4 11 4 7 6 4 1 10 14 13 12 Unknown protein Solyc08g016767.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc08g016770.4 8 9 1 1 3 2 1 0 4 5 4 2 7 2 12 Serine decarboxylase (AHRD V3.3 *** A0A1U8F8Y3_CAPAN) Solyc08g016775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNG8_9ASPA) Solyc08g016780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016791.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016792.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g150109.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016794.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g150110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016796.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016798.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016799.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcineurin B-like protein (AHRD V3.3 *-* A9Q116_MAIZE) Solyc08g016801.1 281 404 363 239 393 507 443 476 329 311 230 351 403 443 265 Aladin (AHRD V3.3 *** A0A1J3JTW2_NOCCA) AT3G56900 Solyc08g016802.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc08g016803.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016804.1 113 65 68 73 20 43 52 28 37 38 88 73 83 94 38 Unknown protein Solyc08g016805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein kinase THESEUS 1 (AHRD V3.3 --* XP_021687179.1) Solyc08g016806.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016807.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g016808.1 3 1 2 0 1 2 0 1 1 1 3 1 2 1 3 Aladin (AHRD V3.3 *** A0A1J3E9R9_NOCCA) Solyc08g054570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcineurin B-like protein 8 (AHRD V3.3 *** A0A2G2X9D2_CAPBA) Solyc08g150120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g036660.4 0 88 832 19 20 26 19 31 45 60 68 40 14 26 2 Jasmonate ZIM domain protein f (AHRD V3.3 *** I3WTA4_NICAT) AT1G30135 Solyc08g036640.3 10 12 409 0 0 0 0 2 0 12 2 10 12 1 0 Jasmonate ZIM domain protein f (AHRD V3.3 *** I3WTA4_NICAT) AT1G30135 Solyc08g036620.4 0 7 182 0 0 0 0 0 0 0 0 0 0 0 5 Jasmonate ZIM domain protein f (AHRD V3.3 *** I3WTA4_NICAT) AT1G30135 Solyc08g036610.3 19 20 0 10 9 11 14 12 13 8 3 11 11 8 1 meiotic recombination protein DMC1 homolog (AHRD V3.3 *-* A0A2I4G687_9ROSI) Solyc08g150117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA2 protein (AHRD V3.3 --* O49072_PETHY) Solyc08g036600.3 135 260 134 155 206 214 230 294 186 211 102 218 160 135 128 Aladin (AHRD V3.3 *** A0A1J3JTW2_NOCCA) Solyc08g036590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcineurin B-like protein 8 (AHRD V3.3 *** A0A2G2X9D2_CAPBA) Solyc08g036580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g036570.1 3 9 22 16 33 26 35 28 13 12 24 64 6 4 3 Glutaredoxin (AHRD V3.3 *** A0A2G9H0A3_9LAMI) Solyc08g036575.1 4 0 0 2 0 1 3 3 3 0 0 0 0 0 5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc08g036550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g036540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g036530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g036533.1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 Unknown protein Solyc08g036535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 BnaCnng12870D protein (AHRD V3.3 *** Q6YSS1_BRANA) Solyc08g036537.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g036520.2 1 1 0 0 0 0 1 0 1 0 1 0 1 2 6 Unknown protein Solyc08g036510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g036500.1 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** ATMG00660.1) Solyc08g036505.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Jasmonate ZIM domain protein f (AHRD V3.3 *** I3WTA4_NICAT) AT1G30135 Solyc08g036503.1 446 265 414 291 313 293 265 332 169 249 425 328 348 291 247 Unknown protein Solyc08g036507.1 154 91 225 109 105 126 155 115 80 85 153 113 149 118 131 Unknown protein Solyc08g036410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g036413.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (AHRD V3.3 *-* A0A2U1MNC5_ARTAN) Solyc08g036417.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L15 (AHRD V3.3 *-* A0A2G2WJY1_CAPBA) Solyc08g048570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048560.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048550.3 493 400 478 560 418 404 487 439 457 467 451 552 409 379 387 Protease Do-like 5, chloroplastic (AHRD V3.3 *** A0A1U8DTN0_CAPAN) AT4G18370 Solyc08g048540.2 110 144 203 147 131 150 161 120 144 116 138 138 176 164 88 Small nuclear ribonucleoprotein family protein (AHRD V3.3 *** F4JQU9_ARATH) AT4G18372 Solyc08g048520.1 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 Small nuclear ribonucleoprotein family protein (AHRD V3.3 *** F4JQU9_ARATH) AT4G18372 Solyc08g048510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048500.3 1321 1581 1324 1214 1287 1293 1273 1402 1323 1218 949 1236 1590 1576 1076 KH domain-containing protein (AHRD V3.3 *** A0A1U8E2G5_CAPAN) AT5G46190 Solyc08g048503.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048507.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048460.2 257 179 68 83 117 68 47 100 122 167 77 169 141 116 100 Ornithine aminotransferase (AHRD V3.3 *-* A0A2G3BRE2_CAPCH) Solyc08g048450.4 1470 688 755 608 551 555 547 461 612 714 585 525 909 761 777 ornithine aminotransferase AT5G46180 Solyc08g048455.1 233 181 178 183 170 147 151 92 130 125 233 146 163 225 181 Unknown protein Solyc08g048440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048430.4 819 543 522 491 483 555 519 559 467 822 456 543 550 627 402 F-box protein (AHRD V3.3 *** A0A2G3BRT0_CAPCH) AT5G46170 Solyc08g150119.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 villin-2-like (AHRD V3.3 *-* A0A1U8EBN1_CAPAN) Solyc08g048410.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G3AFL7_CAPAN) Solyc08g048390.3 963 715 1132 1113 526 774 747 492 971 704 1074 889 620 792 1148 TCP transcription factor 24 AT4G18390 Solyc08g048395.1 3 2 0 5 1 4 0 0 3 1 0 2 0 3 1 Unknown protein Solyc08g048370.4 208 181 281 282 180 188 165 158 222 98 143 204 92 187 191 TCP transcription factor 29 AT4G18390 Solyc08g048350.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein adipocyte-associated 1 (AHRD V3.3 --* XP_004230149.1) Solyc08g048310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G3AFL7_CAPAN) Solyc08g048315.1 0 0 0 0 0 3 0 2 0 0 0 0 0 0 0 CASP-like protein (AHRD V3.3 *** A0A1Q3BRE3_CEPFO) Solyc08g048300.3 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 Cinnamyl-alcohol dehydrogenase (AHRD V3.3 *-* A0A2U1QH68_ARTAN) Solyc08g048290.4 228 201 129 130 121 159 172 155 320 385 453 199 185 170 195 inositol transporter 2 AT1G30220 Solyc08g048250.4 632 598 911 834 654 819 792 669 678 735 667 662 819 866 1003 Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 (AHRD V3.3 *** A0A1U8E192_CAPAN) Solyc08g048240.4 471 565 733 762 753 904 913 711 567 527 918 684 583 691 706 FolD bifunctional protein (AHRD V3.3 *** B6TJF9_MAIZE) Solyc08g048230.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2U8JF96_LEOJA) Solyc08g048190.1 0 12 7 4 5 5 1 0 3 1 4 0 0 10 0 Unknown protein Solyc08g048180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g048070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mitochondrial import inner membrane translocase subunit Tim9 (AHRD V3.3 *** A0A1U8HIB5_CAPAN) Solyc08g048010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g047990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Unknown protein Solyc08g047960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g047950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g047880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g045880.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g045870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC) Solyc08g045860.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g045850.3 1154 991 955 1055 821 725 838 908 1177 1454 881 1231 809 1086 980 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RA18_9MAGN) AT5G42310 Solyc08g045800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g045780.4 464 405 459 503 361 385 505 292 413 327 494 436 384 403 601 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3BRB1_CAPCH) AT3G53170 Solyc08g045770.1 0 0 0 0 0 0 1 0 0 0 7 0 0 0 0 hypothetical protein (AHRD V3.3 --* AT1G61170.1) Solyc08g045760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 L-Ala-D/L-amino acid epimerase (AHRD V3.3 *-* A0A1U8FVL6_CAPAN) Solyc08g045750.1 31 22 22 17 13 15 23 13 38 20 39 44 15 26 23 Unknown protein Solyc08g045740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phospholipase D (AHRD V3.3 *-* M1AD93_SOLTU) Solyc08g045730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4-hydroxy-4-methyl-2-oxoglutarate aldolase (AHRD V3.3 --* A0A2G3CF74_CAPCH) Solyc08g045733.1 0 0 0 0 0 0 0 0 2 1 6 0 0 1 0 Unknown protein Solyc08g045737.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase BRE1A-like (AHRD V3.3 *-* XP_010314382.1) Solyc08g045640.3 488 676 902 920 1124 1045 986 1161 874 822 931 914 727 777 808 Remorin family protein (AHRD V3.3 *** A0A2U1QND3_ARTAN) AT1G30320 Solyc08g045620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G3DB00_CAPCH) Solyc08g044610.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C (AHRD V3.3 *-* Q6QLU0_SOLLC) Solyc08g044590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase, H3 lysine-9 specific protein (AHRD V3.3 *-* A0A2R6PME3_ACTCH) Solyc08g044560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *-* A0A1U8G968_CAPAN) Solyc08g044550.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *-* A0A1U8GIG3_CAPAN) Solyc08g044540.1 0 1 2 0 0 1 1 3 0 0 1 1 0 0 0 hypothetical protein (AHRD V3.3 *-* AT3G57450.1) Solyc08g044510.4 104 130 183 178 257 221 223 272 92 152 142 202 73 115 137 Beta-glucosidase (AHRD V3.3 *** F8R893_9MAGN) AT2G44480 Solyc08g044490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kinesin-like calmodulin-binding protein (AHRD V3.3 *-* A0A2G3D3X0_CAPCH) Solyc08g044480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Checkpoint protein (AHRD V3.3 *-* A0A1U8G4P4_CAPAN) Solyc08g044470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SPX domain-containing protein (AHRD V3.3 *-* D7KU38_ARALL) Solyc08g044440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein strubbelig-receptor family 3 (AHRD V3.3 *-* A0A1J6ILS7_NICAT) Solyc08g044445.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g044410.1 125 166 226 211 188 240 242 145 145 113 125 135 180 162 158 sacI homology domain-containing protein / WW domain-containing protein (AHRD V3.3 *-* AT3G59770.3) Solyc08g044400.3 653 1142 652 762 941 824 944 1103 1171 877 687 866 912 990 767 SacI homology domain-containing protein / WW domain-containing protein (AHRD V3.3 *** F4J9G0_ARATH) AT3G59770 Solyc08g044390.1 0 0 0 0 0 1 0 3 4 0 5 3 0 0 0 Fasciclin-like arabinogalactan protein (AHRD V3.3 *-* A0A2K3P4N3_TRIPR) Solyc08g044380.3 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 DUF1005 domain-containing protein (AHRD V3.3 *** A0A1Q3BB96_CEPFO) AT5G17640 Solyc08g044340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamate receptor (AHRD V3.3 *-* A0A2G2XG28_CAPBA) Solyc08g044345.1 81 121 184 145 170 179 192 150 134 61 136 123 232 226 197 Prefoldin chaperone subunit family protein (AHRD V3.3 *** AT1G49245.1) AT1G49245 Solyc08g044330.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 3'-5' exonuclease domain-containing protein (AHRD V3.3 *-* A0A2U1MTF9_ARTAN) Solyc08g044333.1 0 0 4 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc08g044337.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UB-like protease 1B (AHRD V3.3 --* AT4G00690.1) Solyc08g044300.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc08g044305.1 6 0 0 0 0 0 0 0 0 2 0 0 3 1 0 receptor-like protein kinase (AHRD V3.3 *-* A0A1U7WU94_NICSY) Solyc08g044280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g044270.4 24 8 20 19 14 13 14 21 4 26 0 7 9 13 4 Glutamate synthase (AHRD V3.3 *-* A0A2U1PKW7_ARTAN) Solyc08g044260.4 2066 825 910 1106 329 343 309 202 487 1067 1374 506 760 1169 3369 Fatty acid hydroxylase superfamily (AHRD V3.3 *** A0A2U1L8N4_ARTAN) AT1G02205 Solyc08g044240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chloroplastic group IIA intron splicing facilitator CRS1 chloroplastic-like (AHRD V3.3 *-* A0A2K3NU75_TRIPR) Solyc08g044243.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L15 (AHRD V3.3 *-* A0A2G2WJY1_CAPBA) Solyc08g044247.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g043190.1 0 3 0 0 0 0 0 0 0 1 1 0 0 0 0 Unknown protein Solyc08g043180.3 636 1004 849 1077 1222 1111 1199 1006 863 1126 891 969 976 1010 926 Photosystem II reaction center PsbP family protein (AHRD V3.3 *** A0A0F7GYT8_9ROSI) AT5G27390 Solyc08g043170.4 1807 2037 1888 1794 1852 1754 1641 2010 2175 2484 1600 2177 2361 2130 1740 delta 1-pyrroline-5-carboxylate synthetase AT2G39800 Solyc08g043160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* W5TZQ6_9LAMI) Solyc08g043140.4 60 113 204 107 158 191 162 174 176 117 204 163 110 86 81 C2 domain, Arf GTPase activating protein (AHRD V3.3 *** A0A2U1KMA0_ARTAN) AT3G07940 Solyc08g043143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc08g043147.1 0 1 1 0 0 0 0 0 0 2 0 0 1 0 0 Unknown protein Solyc08g042140.3 170 200 215 182 297 220 201 204 266 195 247 223 164 190 268 translation initiation factor 3 subunit I (AHRD V3.3 *** AT1G54680.4) AT1G54680 Solyc08g042130.2 389 237 182 226 195 185 183 212 300 296 181 245 348 254 220 Phox (PX) domain-containing protein (AHRD V3.3 *** A0A1P8B1Z4_ARATH) AT4G32160 Solyc08g042120.1 74 51 47 64 51 34 74 34 48 42 98 42 61 65 97 PX domain-containing protein EREL1 isoform X3 (AHRD V3.3 *-* XP_025888149.1) Solyc08g042110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g042100.3 333 1127 740 770 1596 1476 1610 1899 1358 1096 778 1615 629 807 456 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A218WUJ5_PUNGR) AT4G31890 Solyc08g042090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g042080.3 920 938 916 898 965 862 827 1002 843 852 1105 893 1009 939 895 protein MULTIPLE CHLOROPLAST DIVISION SITE 1 (AHRD V3.3 *** A0A2I4GWK8_9ROSI) AT1G20830 Solyc08g042070.2 18 14 15 20 11 16 15 11 16 16 10 12 17 15 57 Long chain base biosynthesis protein 2d (AHRD V3.3 *-* A0A2G2X885_CAPBA) Solyc08g042060.2 4 3 9 6 3 2 8 0 11 1 4 14 9 6 0 Unknown protein Solyc08g042065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X459_9ASPA) ATMG00810 Solyc08g042050.3 2771 3209 2691 2833 2510 2617 2529 2678 3171 2468 2502 2786 2638 3228 2805 RNA helicase DEAD25 AT5G26742 Solyc08g042040.4 863 625 781 638 625 817 719 551 400 432 615 378 582 674 607 Kinesin-like protein (AHRD V3.3 *-* A0A328E6H2_9ASTE) Solyc08g042030.3 99 208 164 207 451 310 374 496 293 192 178 265 90 184 113 Kinesin-like protein (AHRD V3.3 *** A0A328E6H2_9ASTE) Solyc08g042020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-glucosidase 10 (AHRD V3.3 *-* A0A2G2ZW54_CAPAN) Solyc08g042025.1 267 295 184 541 272 244 285 248 152 366 260 310 215 281 110 Unknown protein Solyc08g042010.4 3 5 8 3 11 6 2 5 8 6 10 5 1 5 19 Exostosin-like (AHRD V3.3 *** A0A200R599_9MAGN) AT5G25310 Solyc08g042000.3 73 112 109 118 135 144 177 137 142 117 124 143 99 120 151 Sucrose phosphate synthase (AHRD V3.3 *** I7EKT3_LITCN) Solyc08g041980.3 842 929 884 957 947 940 978 1029 901 816 742 964 1177 992 883 ER membrane protein complex subunit 7-like protein (AHRD V3.3 *** A0A2G2YWL6_CAPAN) AT2G25310 Solyc08g041970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g041930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g041920.1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 Unknown protein Solyc08g150118.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g041890.4 4024 3995 2757 3008 3380 3374 3403 3709 2742 2935 2544 3129 2946 3298 2862 Importin subunit alpha (AHRD V3.3 *** A0A1U8E1A1_CAPAN) AT4G16143 Solyc08g041880.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g041870.3 1043 1766 1766 1699 2010 1847 1718 2534 2893 2140 1548 2133 1637 1756 1664 Aspartate aminotransferase (AHRD V3.3 *** A0A2G2W5G8_CAPBA) AT4G31990 Solyc08g041860.1 3751 2234 3660 1853 1203 1113 1103 935 1151 1128 6299 2463 2768 1739 3563 serine/arginine repetitive matrix-like protein (AHRD V3.3 *-* AT4G32020.1) AT4G32020 Solyc08g041865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g041850.4 4 4 15 25 0 5 4 3 12 23 4 4 0 6 0 Homogentisate phytyltransferase 1, chloroplastic (AHRD V3.3 *** A0A1J3IU50_NOCCA) Solyc08g041820.3 2103 707 751 797 317 372 324 261 751 878 943 554 702 669 572 Homeobox protein knotted-1-like 3-like (AHRD V3.3 *** A0A2K3PJ30_TRIPR) Solyc08g041825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) Solyc08g041810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *-* AT5G35090.1) AT5G35090 Solyc08g041800.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g041780.3 1925 1263 1132 1131 1234 1274 1293 1168 1142 1271 988 1255 1048 1198 1078 Neurochondrin (AHRD V3.3 *** A0A200QBZ7_9MAGN) AT4G32050 Solyc08g041770.3 743 945 1093 992 1103 1107 960 1068 1496 1545 1275 1295 1229 1084 968 Hyp O-arabinosyltransferase-like protein (AHRD V3.3 *** AT5G13500.3) AT5G25265 Solyc08g041760.2 0 0 0 3 1 0 0 0 0 0 0 3 0 0 0 Histone-lysine N-methyltransferase (AHRD V3.3 *-* A0A0D3H9X4_9ORYZ) Solyc08g041750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: uncharacterized protein LOC110807046 (AHRD V3.3 --* XP_021887758.1) Solyc08g041740.1 5 1 0 8 1 0 1 2 0 0 0 0 1 0 2 SET domain-containing protein/PHD_2 domain-containing protein/zf-HC5HC2H_2 domain-containing protein (AHRD V3.3 *-* A0A1Q3AYB1_CEPFO) Solyc08g041720.1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc08g041710.3 858 875 1281 1388 910 878 897 882 1464 960 981 1065 1090 1269 2268 envelope glycoprotein B (AHRD V3.3 *** AT1G80540.1) AT2G12400 Solyc08g041700.1 1 0 0 1 1 3 0 0 1 3 0 1 6 0 1 GRAS family transcription factor family protein (AHRD V3.3 *** AT5G19970.1) AT5G19970 Solyc08g041690.1 0 1 0 0 2 0 0 2 0 0 0 0 0 0 1 histone-lysine N-methyltransferase (AHRD V3.3 *-* AT4G26240.1) Solyc08g041680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g041685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc08g041670.2 0 0 0 0 0 0 0 2 1 0 0 0 0 5 0 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *** A0A1Q3BUG5_CEPFO) Solyc08g023660.3 4 1 30 32 37 101 80 35 14 5 19 3 1 39 23 Kirola (AHRD V3.3 *** A0A1U8F0U0_CAPAN) Solyc08g023650.3 0 0 1 4 0 1 2 0 0 6 12 4 0 0 0 Unknown protein Solyc08g023640.1 17 34 36 49 42 31 44 49 50 25 37 28 43 63 36 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3ADH2_CAPAN) AT4G21065 Solyc08g023645.1 173 72 100 111 98 57 61 51 41 84 98 112 83 55 82 Unknown protein Solyc08g023630.3 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like (AHRD V3.3 *-* A0A2I4E0F9_9ROSI) AT4G32270 Solyc08g023600.1 7 0 1 0 3 2 1 1 2 3 0 5 1 0 1 Unknown protein Solyc08g023590.4 128 79 78 99 79 71 73 91 90 78 75 57 60 70 112 WD40 repeat (AHRD V3.3 *** A0A200QX55_9MAGN) Solyc08g023580.4 74 36 31 45 29 37 46 32 44 49 53 29 26 31 30 WD repeat-containing protein 48-like (AHRD V3.3 *-* A0A2I4FK32_9ROSI) Solyc08g023570.2 137 75 127 70 59 100 103 35 42 61 91 43 35 73 80 WD40 repeat (AHRD V3.3 *-* A0A200Q1N2_9MAGN) Solyc08g023550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type protein 1 (AHRD V3.3 *-* A0A2U1M0J0_ARTAN) Solyc08g023540.1 4 12 20 5 7 2 5 5 4 0 9 3 4 1 29 Unknown protein Solyc08g023530.1 104 50 70 38 51 48 54 37 41 39 20 51 30 50 28 Unknown protein Solyc08g023520.1 0 1 0 0 0 2 0 3 0 2 11 0 0 0 0 Unknown protein Solyc08g023510.3 8 5 13 1 0 0 0 0 3 27 37 0 0 3 0 Unknown protein Solyc08g023500.4 219 401 486 434 489 448 430 523 394 372 423 563 451 530 357 Metallo-hydrolase/oxidoreductase superfamily protein (AHRD V3.3 *** A0A2U1PDH4_ARTAN) AT1G30300 Solyc08g023490.4 255 160 126 171 179 166 219 183 249 199 83 214 98 190 170 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RE21_9MAGN) AT1G30290 Solyc08g023495.1 119 53 46 102 46 86 60 85 56 63 53 74 41 61 59 Aluminum induced protein with YGL and LRDR motifs (AHRD V3.3 *-* Q9FG81_ARATH) Solyc08g023480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g023470.3 682 679 545 515 426 495 468 419 570 524 556 397 707 674 591 geranyl pyrophosphate synthase AT2G34630 Solyc08g023460.4 595 501 510 570 436 448 450 475 446 547 419 483 422 491 577 ALA-interacting subunit (AHRD V3.3 *** A0A2G3BRL9_CAPCH) AT5G46150 Solyc08g023440.3 1898 1335 1903 1484 1561 1556 1415 1736 1605 2627 2213 2661 1037 1529 2097 Early-responsive to dehydration stress protein (ERD4) (AHRD V3.3 *** A0A2U1KBS2_ARTAN) AT1G30360 Solyc08g023420.3 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 phospholipase A1-Igamma1, chloroplastic (AHRD V3.3 *-* A0A2I4GUV8_9ROSI) Solyc08g023410.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* Q9C8G6_ARATH) Solyc08g023380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cellulose synthase (AHRD V3.3 *-* K4BTR6_SOLLC) Solyc08g023370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g023360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 20 (AHRD V3.3 *-* A0A2G3CRR2_CAPCH) Solyc08g023340.4 5 0 0 0 0 0 0 0 0 0 0 3 0 0 0 Unknown protein Solyc08g023345.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g023330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g023320.1 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 HAT transposon superfamily protein (AHRD V3.3 *-* F4IB51_ARATH) Solyc08g023270.3 70 52 55 67 59 43 30 27 61 33 38 63 42 38 82 myosin heavy chain-like protein (AHRD V3.3 *** AT4G03620.2) AT4G03620 Solyc08g023240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g022240.1 36 65 102 56 85 55 50 63 34 90 89 92 69 47 115 phospholipase A1-Igamma1, chloroplastic (AHRD V3.3 *** A0A2I4GUV8_9ROSI) AT1G30370 Solyc08g022220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g022210.4 1950 3729 2908 2965 5306 4723 5075 5235 5205 3742 3812 4753 3125 3413 2882 Methylthioribose-1-phosphate isomerase (AHRD V3.3 *** A0A1U8DRF1_CAPAN) AT2G05830 Solyc08g150113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc08g022180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis protein CcsA (AHRD V3.3 *-* K4ENL5_DATST) Solyc08g022170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *-* A0A1L6Z688_CAPCH) Solyc08g022150.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *** A0A2G3AVP7_CAPCH) Solyc08g022140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2Fe-2S ferredoxin-like superfamily protein (AHRD V3.3 *-* F4JV23_ARATH) Solyc08g022130.3 18 10 34 17 42 35 16 35 10 22 7 33 19 1 5 Unknown protein Solyc08g022133.1 32 42 57 47 76 82 78 92 24 44 37 72 49 37 15 Unknown protein Solyc08g022137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g022120.3 1155 905 1230 866 1016 1005 891 711 820 780 1077 872 1102 1022 1312 hypothetical protein (AHRD V3.3 *** AT4G18400.1) AT4G18400 Solyc08g022110.2 942 663 534 608 606 594 499 663 829 860 475 656 595 572 606 bZIP transcription factor family protein (AHRD V3.3 *-* AT5G28770.2) Solyc08g022100.1 4 2 9 8 16 8 7 3 13 9 0 4 1 4 0 Unknown protein Solyc08g022080.4 2588 1822 2173 1968 1707 1807 1953 1633 2138 1596 2439 1470 1851 1806 3096 BZIP transcription factor (AHRD V3.3 *-* A0A1Y0JYZ6_WHEAT) Solyc08g022070.3 2660 2475 2560 3254 2434 2919 3228 2099 2085 2023 2893 1811 2560 2754 4039 Prolyl oligopeptidase (AHRD V3.3 *** H2D7F1_COFAR) AT1G76140 Solyc08g150112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chaperone protein dnaJ 16 (AHRD V3.3 *-* A0A2G2ZHP0_CAPAN) Solyc08g022060.2 578 376 346 427 297 236 237 251 243 363 388 280 365 374 302 Unknown protein Solyc08g022050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoglucanase (AHRD V3.3 *-* Q9ZSP9_SOLLC) Solyc08g022040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4 (AHRD V3.3 *-* A0A1J3D544_NOCCA) Solyc08g022030.3 825 758 819 781 880 909 945 847 990 745 878 793 761 801 887 Myosin heavy chain-related protein (AHRD V3.3 *** Q8H1E5_ARATH) AT4G32190 Solyc08g022020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g022025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g021990.3 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 26S proteasome regulatory subunit (AHRD V3.3 *** A8IIP7_CHLRE) Solyc08g021980.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF659 domain-containing protein (AHRD V3.3 *-* A0A1Q3AM93_CEPFO) AT1G43260 Solyc08g021970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HAT transposon superfamily (AHRD V3.3 *-* Q9LIE1_ARATH) Solyc08g021960.3 282 281 274 222 316 244 219 300 304 337 249 279 299 239 175 EamA-like transporter family (AHRD V3.3 *** A0A2U1LJA9_ARTAN) AT4G32140 Solyc08g021940.3 7 27 16 10 61 27 31 37 14 15 1 20 11 11 23 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* A0A2U1MY23_ARTAN) Solyc08g021930.2 43 74 129 119 154 180 209 104 49 67 89 91 52 80 68 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* A0A2U1MY23_ARTAN) Solyc08g021920.4 4643 4444 4556 5154 4637 4894 5105 4155 3934 4172 3974 3942 3985 4739 4832 DnaJ-like protein subfamily C GRV2 (AHRD V3.3 *** A0A2G2YXE7_CAPAN) AT2G26890 Solyc08g021880.1 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 Ankyrin repeat family protein (AHRD V3.3 *-* F8WLB2_CITUN) Solyc08g021870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat family protein (AHRD V3.3 *-* F8WLA0_CITUN) Solyc08g021830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 20 (AHRD V3.3 *** A0A2G3DCT4_CAPCH) Solyc08g021820.3 33 12 11 12 6 12 18 21 15 13 55 6 3 11 48 auxin-regulated IAA29 AT4G32280 Solyc08g021790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G2XLB4_CAPBA) Solyc08g021795.1 204 142 116 126 53 69 59 55 85 120 72 84 110 175 87 Unknown protein Solyc08g029410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0U1ZJJ5_9SOLN) Solyc08g029400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0U1ZJJ5_9SOLN) Solyc08g029380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g029385.1 2 0 0 0 15 12 14 9 1 1 14 1 6 7 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc08g029360.4 54 16 28 55 23 34 17 32 40 41 46 31 30 37 42 Unknown protein Solyc08g029340.1 0 2 0 7 0 0 0 0 0 0 1 0 0 0 0 Unknown protein Solyc08g029342.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MW90_TRIPR) Solyc08g029344.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g029346.1 16 12 8 25 2 0 1 1 6 5 28 11 14 11 4 Unknown protein Solyc08g150116.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc08g029300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g029290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 1 (AHRD V3.3 *-* F2XDK7_9FLOR) Solyc08g029280.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 1 (AHRD V3.3 *** A0A2G2Y6A9_CAPAN) Solyc08g029270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *-* A0A0C5B9X0_9SOLA) Solyc08g029250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 9 (AHRD V3.3 *** G3EJ00_CUCSA) Solyc08g029240.3 33 24 103 54 136 142 126 95 49 37 74 60 13 11 11 Unknown protein Solyc08g029230.4 754 500 528 576 348 388 354 347 383 520 451 405 513 507 491 aspartic proteinase-like protein 2 (AHRD V3.3 *** A0A1U7VWJ9_NICSY) AT5G43100 Solyc08g029235.1 18 9 30 29 5 5 16 16 8 41 8 39 8 18 34 Unknown protein Solyc08g029220.3 1126 1036 889 703 846 985 1036 937 1026 745 672 966 1159 1130 935 DnaJ domain-containing protein (AHRD V3.3 *** A0A2U1PTF5_ARTAN) AT5G27240 Solyc08g029200.3 642 626 695 763 674 789 808 606 593 572 649 619 748 777 712 S-acyltransferase (AHRD V3.3 *** A0A2G2W4Y5_CAPBA) AT3G04970 Solyc08g029190.3 309 455 448 239 303 339 319 332 375 267 341 229 400 361 282 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** A0A1R7T3E1_ARATH) AT2G25290 Solyc08g029170.3 289 522 432 473 432 463 414 395 383 351 390 414 610 528 386 Hexosyltransferase (AHRD V3.3 *** A0A1U8EVS5_CAPAN) AT2G25300 Solyc08g029160.1 520 353 976 829 490 570 574 372 973 594 1318 653 366 539 949 Membrane steroid binding protein (AHRD V3.3 *** A0A1Y1HVR8_KLENI) AT2G24940 Solyc08g029150.3 282 234 180 193 226 176 200 192 169 236 121 183 194 189 164 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3AWG6_CAPCH) AT1G77405 Solyc08g029130.3 2013 1933 1210 1132 1572 1454 1493 1839 1934 1730 1021 1588 1725 1703 1441 Chromatin remodeling factor (AHRD V3.3 *** A0A178UZA8_ARATH) AT2G25170 Solyc08g029110.3 775 940 730 802 1062 883 884 1020 954 801 704 875 1135 917 682 Protein MEMO1 (AHRD V3.3 *** A0A1J3IX38_NOCCA) AT2G25280 Solyc08g029090.4 2748 2429 3197 3136 5013 6095 5511 4842 2554 2920 2888 3317 2281 2824 2644 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3DFU3_CEPFO) Solyc08g029070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g029075.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc08g029050.4 68 273 115 169 167 154 190 178 163 119 108 107 334 230 202 TOPLESS 6 Solyc08g029020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication protein A 70 kDa DNA-binding subunit C (AHRD V3.3 --* RFA1C_ORYSJ) Solyc08g029000.3 13 12 0 3 0 0 0 0 3 1 19 0 1 33 16 Lipoxygenase (AHRD V3.3 *** K4CJW3_SOLLC) AT1G55020 Solyc08g028990.1 1 5 13 1 0 10 3 13 0 1 0 1 0 0 0 C2 calcium-dependent membrane targeting (AHRD V3.3 *-* A0A200QWK1_9MAGN) Solyc08g028980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oleosin 14.9 kDa (AHRD V3.3 *-* A0A2G3CHZ7_CAPCH) AT5G26805 Solyc08g028970.3 89 44 51 45 71 79 56 47 36 45 95 28 69 74 94 Vacuolar iron transporter-like protein 3 (AHRD V3.3 *-* A0A2G3AWL9_CAPCH) Solyc08g028973.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g150114.1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2Y582_CAPAN) Solyc08g150115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* RPOC1_SOLTU) Solyc08g028950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* F6I7T7_OLEEU) Solyc08g028940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A1U8QCC7_CAPAN) Solyc08g028930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* I6N947_DATST) Solyc08g028920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2H4N1U1_ARTAN) Solyc08g028910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G2V8P8_CAPBA) Solyc08g028900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2G2ZTM2_CAPAN) Solyc08g028890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *-* A0A2G3B243_CAPCH) Solyc08g028880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2 (AHRD V3.3 *-* H2BC61_9CARY) Solyc08g028870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit a, chloroplastic (AHRD V3.3 *-* A0A2H4REX1_9LAMI) Solyc08g028875.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit a, chloroplastic (AHRD V3.3 *-* L7NM01_9MAGN) Solyc08g028860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit c, chloroplastic (AHRD V3.3 *** A0A1U8QD53_CAPAN) Solyc08g028850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein 68 (AHRD V3.3 *** B6SRZ1_MAIZE) Solyc08g028810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication factor A protein (AHRD V3.3 *-* A0A2K3LFI1_TRIPR) AT2G05642 Solyc08g028780.1 313 243 280 236 163 141 181 216 110 154 335 187 182 156 152 DUF868 domain-containing protein (AHRD V3.3 *** A0A1Q3AW51_CEPFO) AT5G11000 Solyc08g028785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g028770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Charged multivesicular body protein 1 (AHRD V3.3 *-* A0A1J3JVH2_NOCCA) Solyc08g028750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A1D8GRQ1_9APIA) Solyc08g028740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A142J9F5_KOLAM) Solyc08g028700.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g028705.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g028690.4 103 96 135 126 47 20 62 53 140 115 170 92 150 125 341 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4JI53_ARATH),Pfam:PF13561 Solyc08g028693.1 2 0 0 1 0 1 1 1 1 0 2 0 0 0 0 General transcription factor IIH subunit (AHRD V3.3 *-* A0A2G2XQE2_CAPBA) Solyc08g028697.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g059650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g059655.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc08g059660.3 3197 2031 2692 2311 1708 1860 1744 1927 2415 2640 2790 1937 2228 1829 2779 ANTH domain-containing protein (AHRD V3.3 *** A0A1Q3CZP3_CEPFO) AT2G25430 Solyc08g059690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT hook motif DNA-binding family protein (AHRD V3.3 *-* A0A2U1PYS7_ARTAN) Solyc08g059700.2 475 593 493 852 708 454 625 438 561 351 865 662 404 663 578 histone acetyltransferase (AHRD V3.3 *** AT4G32295.1) AT4G32295 Solyc08g059710.4 2 10 54 2 2 1 1 0 3 34 46 5 3 10 0 EEIG1/EHBP1 N-terminal domain-containing protein (AHRD V3.3 *** A0A2U1Q5Z2_ARTAN) Solyc08g059715.1 315 195 277 208 196 173 220 176 201 205 344 287 243 289 310 PttA' (AHRD V3.3 *** O22369_PETHY) Solyc08g059730.1 190 133 115 119 105 103 92 97 128 171 175 137 120 177 168 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (AHRD V3.3 *** A0A1U8EHB8_CAPAN) AT4G32300 Solyc08g059740.1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* F4INW4_ARATH) Solyc08g059750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2K3NR02_TRIPR) Solyc08g059760.3 854 602 852 840 823 878 919 603 591 575 885 548 635 550 1122 Peroxidase (AHRD V3.3 *** A0A2P5YQP5_GOSBA) AT4G32320 Solyc08g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc08g059770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger protein 1-like (AHRD V3.3 *-* XP_021807844.1) Solyc08g059790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g059800.3 1406 2501 2044 2157 3281 3022 3025 3384 1823 1463 2076 2318 2126 2343 1899 TPX2 (Targeting protein for Xklp2) family protein (AHRD V3.3 *** A0A2K3NRR7_TRIPR) AT4G32330 Solyc08g060810.3 5203 2641 2401 2522 1962 2033 1910 2293 2337 3085 2715 2137 2291 2543 2880 EIN3-binding F-box protein 2 AT2G25490 Solyc08g060815.1 0 2 4 6 0 3 1 2 3 0 14 2 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3D6E9_CAPCH) Solyc08g060830.4 776 390 483 504 328 416 409 282 293 331 518 329 379 470 540 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (AHRD V3.3 *-* A0A2G3ATB7_CAPCH) Solyc08g060840.1 1120 707 553 597 589 492 523 677 811 733 458 617 567 705 497 Protein FAR-RED IMPAIRED RESPONSE 1 (AHRD V3.3 *** A0A2G2X5B3_CAPBA) AT4G15090 Solyc08g060860.3 471 387 581 482 541 579 554 382 458 453 558 498 495 465 481 DUF4050 domain-containing protein (AHRD V3.3 *** A0A1Q3CKJ2_CEPFO) AT5G25360 Solyc08g060870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g060880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g060890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g060900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g060920.4 314 363 445 370 284 417 280 272 402 612 294 405 320 497 463 IDS4-like Solyc08g060925.1 30 88 162 142 93 144 86 71 58 59 183 103 123 81 177 Unknown protein Solyc08g060940.1 1038 1747 1717 1903 1765 1732 1584 1697 2006 1965 1912 2062 2327 2067 1989 Nucleotide-sugar transporter family protein (AHRD V3.3 *** A0A2U1NGQ1_ARTAN) Solyc08g060945.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g060950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like kinase (AHRD V3.3 *-* A7VM22_MARPO) Solyc08g060960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *-* AT3G45200.1) Solyc08g060970.4 541 786 1573 1204 1128 1180 1427 1134 1068 822 1243 878 607 790 757 polygalacturonase AF118567 AT5G27530 Solyc08g060973.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 278 (AHRD V3.3 -** XP_022547472.1) Solyc08g060977.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 278 (AHRD V3.3 -** XP_022547472.1) Solyc08g061000.4 3116 3267 2916 2919 2134 2169 2060 2301 3138 2355 2412 2445 4286 3702 3217 DEAD-box ATP-dependent RNA helicase 15 (AHRD V3.3 *** A0A2G2YWF8_CAPAN) AT5G11170 Solyc08g061010.4 129 123 147 120 118 97 93 98 92 116 145 124 87 152 160 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AZ62_ARATH) Solyc08g061020.1 32 23 12 20 9 21 10 25 26 23 18 50 39 26 7 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AZ04_ARATH) Solyc08g061025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g061060.3 5 2 0 10 0 1 0 0 2 3 2 0 3 1 0 EG45-like domain containing protein (AHRD V3.3 *** A0A2K3LKU5_TRIPR) Solyc08g061070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g061090.3 554 592 647 511 606 538 549 523 540 519 478 620 656 637 650 Mitochondrial carrier protein (AHRD V3.3 *** A0A200PQF9_9MAGN) AT4G32400 Solyc08g061100.3 8022 7690 8272 7505 6860 7545 6923 8083 10258 10990 9747 8929 6952 6542 8036 Cellulose synthase (AHRD V3.3 *** K4CKQ2_SOLLC) AT4G32410 Solyc08g061130.3 340 474 212 302 497 522 510 501 403 215 234 458 284 289 258 Transcription factor HY5 (AHRD V3.3 *** A0A1U8E2N7_CAPAN) AT5G11260 Solyc08g061140.3 708 441 465 388 309 322 344 357 391 445 512 433 418 494 507 protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 (AHRD V3.3 *** A0A2I4E0E9_9ROSI) AT5G11270 Solyc08g061145.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Geraniol 8-hydroxylase (AHRD V3.3 *-* A0A2G2W2C6_CAPBA) Solyc08g061180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A1U8E5M0_CAPAN) Solyc08g061190.1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g061210.3 87 62 75 68 68 73 44 58 41 68 58 30 27 63 15 Unknown protein Solyc08g061220.3 419 471 578 513 571 603 552 552 598 419 499 611 576 629 555 Tomato G protein alpha-subunit AT2G26300 Solyc08g061240.3 118 62 71 66 93 56 56 60 79 101 57 106 54 86 71 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1N0Y2_ARTAN) AT5G21950 Solyc08g061245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBN2_3 domain-containing protein (AHRD V3.3 *** A0A1Q3AQH1_CEPFO) AT1G21280 Solyc08g061250.3 9 19 2 9 0 2 5 4 5 10 9 4 14 4 14 Receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2W5C1_CAPBA) Solyc08g061260.4 1565 767 843 905 736 664 759 543 602 826 902 742 820 820 1004 G-protein coupled receptor 1 (AHRD V3.3 *** A0A1J6JVK8_NICAT),Pfam:PF05462 AT1G48270 Solyc08g061270.1 199 260 179 326 110 153 158 127 430 499 468 184 1204 401 307 DUF1677 family protein (DUF1677) (AHRD V3.3 *** Q9SK23_ARATH) Solyc08g150122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3 (AHRD V3.3 --* A0A2G2WNM8_CAPBA) Solyc08g061275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc08g150123.1 4 6 0 0 0 0 0 0 5 1 1 4 0 0 7 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc08g061320.3 8809 7884 7109 7468 6942 8303 8312 6291 6103 5863 7974 5178 7628 7291 8238 Polyadenylate-binding protein-interacting protein 7 (AHRD V3.3 *** A0A2G3BRE1_CAPCH) AT2G26280 Solyc08g061340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) Solyc08g061350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 3 (AHRD V3.3 *-* A0A1J3JN08_NOCCA) Solyc08g061360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* XP_010325684.1) Solyc08g061370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) Solyc08g061380.1 24 18 17 27 15 39 41 23 23 22 6 18 39 16 17 F-box protein (AHRD V3.3 *-* XP_025886678.1) Solyc08g061390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) Solyc08g061400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) Solyc08g061410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) Solyc08g061420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4 (AHRD V3.3 *-* A0A1J3D544_NOCCA) Solyc08g061430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g061450.3 85 86 57 62 54 62 60 63 78 44 42 52 77 78 113 exosome complex exonuclease (AHRD V3.3 *** AT5G25500.1) AT5G25500 Solyc08g061455.1 0 0 1 3 2 5 5 1 0 0 18 4 5 7 5 CTC-interacting domain 7 (AHRD V3.3 *-* A0A1P8B1N0_ARATH) Solyc08g061480.3 366 426 878 802 325 444 406 349 654 453 1189 488 345 550 713 Chalcone-flavanone isomerase family protein (AHRD V3.3 *** A0A2U1NFT5_ARTAN) AT2G26310 Solyc08g061490.3 719 173 173 191 12 33 40 27 89 348 340 62 77 124 102 MTD1 (AHRD V3.3 *** A0A2K3PL64_TRIPR) Solyc08g061500.3 3572 2292 2036 2306 2400 2413 2463 2382 1571 1969 1409 1998 1823 2017 1593 Myosin (AHRD V3.3 *** A0A2U1NL29_ARTAN) Solyc08g061520.3 142 114 75 67 104 75 61 130 133 74 28 110 61 70 36 Myosin (AHRD V3.3 *-* A0A2U1NL80_ARTAN) Solyc08g061560.3 12648 16136 18387 15731 25464 25186 24190 25461 14992 12240 17750 25199 8563 15794 12447 Receptor protein kinase (AHRD V3.3 *** A0A0U5BM22_RORAQ) AT2G26330 Solyc08g061570.3 96 40 36 34 26 39 39 24 45 52 50 22 47 38 40 Copper-transporting ATPase PAA2, chloroplastic (AHRD V3.3 *-* A0A2G2W560_CAPBA) Solyc08g061590.4 1529 928 885 1062 1038 1267 1094 865 814 918 957 845 588 731 1020 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VV98_CAPBA) AT1G62350 Solyc08g150124.1 3 5 8 3 5 9 7 3 2 8 9 9 5 4 0 Unknown protein Solyc08g061610.4 1241 1479 1307 1456 1839 2033 2193 2084 2579 2733 1674 2702 1125 1595 1132 Copper-transporting ATPase PAA2, chloroplastic (AHRD V3.3 *** A0A2G3BRF7_CAPCH) AT5G21930 Solyc08g061630.3 301 789 806 950 957 843 843 956 782 649 584 952 509 680 710 YGGT family protein (AHRD V3.3 *** F8WLD3_CITUN) AT5G21920 Solyc08g061640.1 19 20 20 30 11 15 6 2 11 16 13 2 28 38 31 transmembrane protein (AHRD V3.3 *** AT5G21910.1) AT5G21910 Solyc08g061650.4 97 113 154 84 91 102 118 103 108 66 100 93 68 105 154 F-box/LRR-repeat protein 13 (AHRD V3.3 *-* A0A1J3CED2_NOCCA) AT2G06040 Solyc08g061660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A2G3DAW7_CAPCH) Solyc08g061665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A1U8EY34_CAPAN) Solyc08g061680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc08g061690.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc08g061695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc08g061710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc08g061720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc08g061730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc08g061735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g061740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc08g061745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 adenylate isopentenyltransferase 5, chloroplastic-like (AHRD V3.3 *-* XP_025883842.1) Solyc08g061750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc08g061755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc08g061770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc08g061780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc08g061790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *-* A0A2U1KGG4_ARTAN) Solyc08g061800.3 123 96 107 95 121 114 98 132 140 161 115 102 120 114 88 hypothetical protein (AHRD V3.3 *-* AT2G26340.2) Solyc08g061820.3 6449 3449 2850 3331 2427 2476 2561 2493 2599 4038 2897 3378 2665 3097 3200 F-box/LRR-repeat protein 15 (AHRD V3.3 *** A0A2G3AXX6_CAPCH) AT4G33210 Solyc08g061830.1 5 11 5 11 5 19 23 16 0 2 0 2 0 6 0 Ubiquitinyl hydrolase 1 (AHRD V3.3 *-* A0A2G2W3P2_CAPBA) Solyc08g061840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitinyl hydrolase 1 (AHRD V3.3 *-* A0A1U8H056_CAPAN) Solyc08g061843.1 2670 3978 3239 2650 3157 2766 2719 2976 2477 2523 2318 2688 4946 3831 3008 40S ribosomal protein S3, putative, expressed (AHRD V3.3 *** Q75G91_ORYSJ) AT5G35530 Solyc08g061847.1 17 2 8 4 16 0 1 1 5 3 8 5 9 14 14 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc08g061880.2 39 16 12 13 16 12 10 6 7 9 35 14 21 12 22 Peroxin 10 (AHRD V3.3 *-* A0A2U1M628_ARTAN) Solyc08g061890.4 66 38 21 39 46 32 26 45 72 37 46 45 63 78 51 DWNN domain, a CCHC-type zinc finger (AHRD V3.3 *-* A0A2U1LZ01_ARTAN) Solyc08g061900.1 0 0 0 1 0 0 0 2 0 0 2 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A1C8V718_9ROSI) Solyc08g150125.1 9 4 8 19 11 9 11 6 9 11 1 11 1 5 6 Unknown protein Solyc08g061905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GATA zinc finger domain-containing protein 14-like (AHRD V3.3 --* XP_004245404.1) Solyc08g150126.1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3CWT8_CAPCH) Solyc08g061910.4 232 416 298 457 690 598 543 575 566 196 292 348 419 462 452 trihelix transcription factor GTL1-like (AHRD V3.3 --* XP_022865658.1) Solyc08g061920.3 0 0 0 2 8 7 2 4 0 0 0 3 0 0 0 Cytokinin oxidase/dehydrogenase (AHRD V3.3 *** C3VPM8_SOLTU) AT5G21482 Solyc08g061930.4 344 258 624 502 693 609 688 525 482 597 459 531 583 495 529 Cytokinin oxidase/dehydrogenase (AHRD V3.3 *** C3VPM8_SOLTU) AT5G21482 Solyc08g061935.1 260 203 167 180 179 156 178 156 135 199 151 139 211 163 105 Unknown protein Solyc08g061950.1 3 5 1 7 0 7 11 11 3 6 2 6 12 14 6 Unknown protein Solyc08g061955.1 12232 17168 18730 16825 22031 25150 24119 15986 8921 10607 15224 13762 17918 16465 16117 40S ribosomal protein S3, putative, expressed (AHRD V3.3 *-* Q75G91_ORYSJ) Solyc08g061970.3 151 150 348 175 107 79 111 102 431 105 248 97 165 153 237 putative spermine synthase,Pfam:PF01564 AT5G19530 Solyc08g061980.4 1579 2317 2113 1695 3055 2736 2632 3788 2207 1936 2000 2693 2042 2211 1896 Mechanosensitive ion channel protein (AHRD V3.3 *-* A0A1U8DTK7_CAPAN) Solyc08g061990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 3 (AHRD V3.3 *** A0A1J3JN08_NOCCA) Solyc08g062000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT3G32330 Solyc08g062030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062040.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein / helicase domain-containing protein (AHRD V3.3 *-* A0A178VR01_ARATH) Solyc08g062060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4 (AHRD V3.3 *-* A0A1J3GDY4_NOCCA) Solyc08g062070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *-* A0A200QQJ8_9MAGN) Solyc08g062080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4 (AHRD V3.3 *-* A0A1J3D544_NOCCA) Solyc08g062090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062100.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062140.1 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 MAP kinase kinase kinase 62 Solyc08g062150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4FF66_9ROSI) Solyc08g062160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 C2 domain-containing protein (AHRD V3.3 *** A0A1Q3AM13_CEPFO) Solyc08g062180.3 171 165 224 162 67 90 79 54 141 163 96 161 217 176 182 protein BIG GRAIN 1-like A (AHRD V3.3 *** A0A2I4FTX4_9ROSI) Solyc08g062190.3 1927 1548 1259 1911 1768 1650 1510 1657 1660 2048 1500 1774 1634 1698 1353 Carbon-nitrogen hydrolase (AHRD V3.3 *** A0A200QEN6_9MAGN) AT5G12040 Solyc08g062200.3 3 2 12 4 17 24 7 20 16 3 8 4 10 7 0 Plant regulator RWP-RK (AHRD V3.3 *** A0A1R3H9J6_COCAP) Solyc08g062210.3 1645 1399 1141 1419 656 814 741 658 1649 1152 1326 1131 2160 1560 2067 Nuclear transcription factor Y subunit A-1 (AHRD V3.3 *** A0A1U8DRR5_CAPAN) AT1G17590 Solyc08g062220.3 166 127 76 49 22 36 22 45 36 126 24 35 548 120 101 Glycosyltransferase (AHRD V3.3 *** A0A218W5V3_PUNGR) AT2G43820 Solyc08g062250.3 2 0 0 2 2 4 13 7 1 1 0 4 2 16 3 Guanylate-binding family protein (AHRD V3.3 *-* A0A2U1PP48_ARTAN) Solyc08g062280.2 1 0 0 0 0 0 0 0 1 2 0 4 1 0 1 Alpha-L-fucosidase 1 (AHRD V3.3 *-* A0A2G2ZYP6_CAPAN) Solyc08g062290.4 52 35 46 48 29 17 15 35 68 22 65 15 30 14 90 Unknown protein Solyc08g062330.3 465 407 828 404 111 65 70 63 392 682 1124 226 889 349 393 Ankyrin repeat family protein (AHRD V3.3 *** F8WLA0_CITUN) Solyc08g062340.3 37 8 38 9 0 1 0 0 11 2 14 6 40 12 4 17.9 kDa class II heat shock protein (AHRD V3.3 *** A0A2G3A1B9_CAPAN) AT5G12020 Solyc08g062360.3 386 185 80 37 9 9 5 10 32 103 170 17 132 103 75 Ankyrin repeat family protein (AHRD V3.3 *** F8WLA0_CITUN) Solyc08g062370.3 7 14 3 16 10 20 21 4 17 7 40 18 8 12 36 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9SYM7_ARATH) Solyc08g062380.1 0 0 0 0 2 0 2 0 2 0 0 0 0 1 0 Thebaine 6-O-demethylase (AHRD V3.3 *-* A0A2G3BQV5_CAPCH) Solyc08g062390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062420.3 252 374 574 387 463 609 545 501 415 377 561 362 491 440 399 Myb/SANT-like domain (AHRD V3.3 *** A0A200QQD5_9MAGN) Solyc08g062430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062433.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc08g062435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc08g062437.1 375 165 208 79 20 11 6 12 86 52 54 73 120 77 42 17.9 kDa class II heat shock protein (AHRD V3.3 *** A0A2G3CY92_CAPCH) AT5G12020 Solyc08g062500.3 2024 1268 1706 1197 1098 1244 1220 1080 1117 1266 1405 1176 1153 1153 1319 protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 (AHRD V3.3 *** A0A2I4GL70_9ROSI) Solyc08g062503.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc08g062507.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc08g062520.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc08g062530.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HDG11 (AHRD V3.3 *-* G2J5S9_MAIZE) Solyc08g062540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger CCCH domain-containing protein 53 isoform X4 (AHRD V3.3 --* XP_010324869.1) Solyc08g062560.4 1836 1376 1186 1170 1040 1210 1249 1007 1030 1088 1059 983 1025 1258 1100 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q8GYE8_ARATH) AT5G26180 Solyc08g062570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *-* A0A200QSE6_9MAGN) Solyc08g062580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CFE3_CAPCH) AT1G74630 Solyc08g150127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062600.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exostosin-like (AHRD V3.3 *** A0A200QSE2_9MAGN) AT1G74680 Solyc08g062610.4 662 518 644 486 603 596 681 553 617 605 649 623 374 520 513 Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V3.3 *** A0A2P6VLP6_9CHLO),Pfam:PF02353 AT4G33110 Solyc08g062620.3 35 54 93 58 98 106 76 86 40 20 72 50 24 50 46 Mitochondrial distribution/morphology family 35/apoptosis (AHRD V3.3 *** A0A200QD19_9MAGN) AT4G33100 Solyc08g062630.3 2352 2758 1723 1684 2221 2009 1956 3092 3144 2737 1537 2470 2537 2478 1909 Aminopeptidase (AHRD V3.3 *** A0A1U8DRZ6_CAPAN) AT4G33090 Solyc08g062640.3 307 309 483 466 331 372 400 279 301 280 480 249 317 374 491 Protein phosphatase 2c (AHRD V3.3 *-* F8WL78_CITUN) Solyc08g062650.2 400 345 264 337 394 322 296 428 406 404 196 372 284 356 316 Protein phosphatase 2c (AHRD V3.3 *** F8WL78_CITUN) Solyc08g062655.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc08g062660.3 2504 3716 2797 2037 2622 2638 2396 2819 2321 1872 2096 1926 3724 2748 3374 Ran binding protein-1 Solyc08g062670.3 1632 1189 931 1244 1243 1335 1244 1396 1096 1193 841 1210 1295 1299 1491 Serine/threonine-protein kinase (AHRD V3.3 *** F8WL77_CITUN) AT4G33080 Solyc08g062675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc08g062680.1 209 157 319 80 27 39 28 36 103 58 900 109 110 94 146 Harbinger transposase-derived nuclease (AHRD V3.3 *-* A0A2U1Q453_ARTAN) Solyc08g062690.2 1 5 0 0 0 0 1 0 1 1 0 0 0 0 0 Unknown protein Solyc08g062700.3 1506 1038 1098 716 725 715 712 633 891 782 1032 781 899 992 1058 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** F8WL74_CITUN) AT4G33060 Solyc08g062720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc08g062760.1 210 147 258 730 248 264 283 160 137 408 312 143 134 284 171 leucine-rich repeat extensin-like protein 1 (AHRD V3.3 --* XP_010094960.2) Solyc08g062770.3 451 353 280 299 229 288 280 268 314 327 290 316 438 471 400 Methyltransferase-like protein (AHRD V3.3 *** A0A2U1NMZ7_ARTAN) AT2G26200 Solyc08g062780.2 18 14 16 21 3 2 9 2 10 10 26 20 20 21 23 bHLH transcription factor 089 AT2G16910 Solyc08g062783.1 2 7 1 4 0 0 0 0 0 0 0 0 0 3 1 Unknown protein Solyc08g062785.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 60S ribosomal protein L19-2 (AHRD V3.3 *-* A0A2G3C1J0_CAPCH) Solyc08g150128.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2Y582_CAPAN) Solyc08g062800.3 2478 4230 2640 2430 3200 2884 2971 3322 2536 2537 2034 2656 4345 3631 2184 RNA helicase DEAD26 AT1G54270 Solyc08g062810.1 23 17 48 10 17 7 12 23 12 13 9 10 17 10 34 DUF3511 domain-containing protein (AHRD V3.3 *-* A0A1Q3CMD7_CEPFO) AT2G19460 Solyc08g062820.3 203 385 305 364 1110 985 1171 842 327 243 403 354 371 342 283 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** A0A2G3BRK1_CAPCH) AT5G11950 Solyc08g062840.1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062850.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc08g062860.3 300 240 281 260 123 227 254 201 215 261 256 152 246 257 289 Mitochondrial carrier protein (AHRD V3.3 *** A0A200Q1U5_9MAGN) AT1G14560 Solyc08g062865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g062870.1 465 348 365 456 237 198 281 281 157 334 241 249 463 313 144 Unknown protein Solyc08g062900.3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Inosine-uridine preferring nucleoside hydrolase family protein (AHRD V3.3 *-* A0A2U1LEG5_ARTAN) Solyc08g062910.4 3144 5421 3271 3334 4494 4571 4254 5016 4418 4122 2942 4050 4598 4323 2989 Elongation factor (AHRD V3.3 *** Q7XTK1_ORYSJ) Solyc08g062920.3 4114 7099 4335 3779 5399 4889 4462 6140 4921 5046 3158 5019 6647 5520 4271 elongation factor 2 AT1G56070 Solyc08g062930.3 19 11 23 30 1 0 0 0 7 2 48 1 13 42 72 Calmodulin-binding protein (AHRD V3.3 *** A0A2K3LV07_TRIPR) Solyc08g062935.1 0 3 1 0 0 0 0 0 0 3 0 0 0 0 8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VVU6_9ASPA) ATMG00810 Solyc08g062940.4 182 838 722 975 1749 1690 1605 1901 784 516 940 1108 135 411 298 SUN-like protein 22 AT2G26180 Solyc08g062950.4 80 147 246 228 70 94 122 74 327 110 225 192 135 172 298 Cytochrome P450 family protein (AHRD V3.3 *** G7I9V8_MEDTR) AT2G26170 Solyc08g062960.4 1175 281 701 297 127 109 108 114 428 366 613 684 248 677 575 Heat shock transcription factor (AHRD V3.3 *-* A0A1Y1I763_KLENI) AT2G26150 Solyc08g150129.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Syntaxin (AHRD V3.3 *-* B7X6S8_TOBAC) Solyc08g062970.1 807 713 693 808 432 418 450 303 509 963 777 798 1122 635 464 Glutaredoxin (AHRD V3.3 *** A0A118JSL8_CYNCS) AT4G33040 Solyc08g062990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK-related protein kinase (AHRD V3.3 *-* A0A1U8EC13_CAPAN) Solyc08g063000.4 66 139 109 133 126 129 191 143 216 92 193 104 173 140 313 Nucleosome assembly protein family (AHRD V3.3 *** A9TVZ4_PHYPA) Solyc08g063010.3 53 42 55 74 40 73 61 40 61 37 75 63 79 91 76 Mitochondrial carrier protein (AHRD V3.3 *** A0A200QCQ6_9MAGN) AT5G56450 Solyc08g063020.1 0 1 2 4 1 4 0 1 3 2 0 12 0 6 1 Unknown protein Solyc08g063030.2 18 19 11 20 40 36 9 19 26 20 24 13 32 37 43 ADP,ATP carrier protein, mitochondrial (AHRD V3.3 *-* A0A2I4FH22_9ROSI) Solyc08g063035.1 100 20 34 31 1 2 4 1 12 46 43 16 35 26 90 DDT domain-containing protein DDB_G0282237 (AHRD V3.3 --* XP_010321301.1) Solyc08g063040.4 1033 760 1356 1118 476 454 432 432 700 768 2414 859 716 862 1029 Zinc-finger protein Solyc08g063050.3 2524 2418 2137 2425 2473 2379 2503 2410 2537 2380 2456 2413 2795 2584 2030 ATP-dependent zinc metalloprotease ftsh mitochondrial-like (AHRD V3.3 *** A0A2K3NMR1_TRIPR) AT2G26140 Solyc08g063055.1 8 1 4 0 31 9 14 13 2 1 0 0 1 4 0 Unknown protein Solyc08g063070.3 1098 680 1056 928 635 740 781 517 565 537 1052 664 655 761 1371 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NDY5_ARTAN) AT5G11910 Solyc08g063080.3 843 1019 1076 789 923 782 735 985 1252 937 766 1045 1009 1196 722 UDP-sulfoquinovose synthase (AHRD V3.3 *** B6T784_MAIZE) AT4G33030 Solyc08g063090.2 39 217 332 235 225 234 281 167 252 172 355 363 118 182 151 Fatty acid desaturase (AHRD V3.3 *** A0A2U1LPJ3_ARTAN) AT2G46210 Solyc08g063120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g150130.1 0 0 9 5 0 0 5 0 0 2 2 2 7 1 3 Unknown protein Solyc08g150131.1 7 9 16 4 4 1 2 6 6 0 7 0 18 10 5 Unknown protein Solyc08g065130.3 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 LOB domain-containing protein 22 (AHRD V3.3 *** A0A2G3BRT7_CAPCH) Solyc08g065140.1 684 1288 556 1225 1692 1170 1140 1631 953 1350 832 899 1098 573 471 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** A0A2U1MMJ0_ARTAN) AT5G11890 Solyc08g065145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc08g065150.1 3047 4776 4229 5169 6058 5476 5216 7204 4752 8514 6227 6997 4425 4148 3041 At2g26110 (AHRD V3.3 *-* O80986_ARATH) AT2G26110 Solyc08g065160.3 6897 3667 3293 3514 2301 2000 1816 1900 2360 2847 3146 2888 3190 2957 3433 Mediator of RNA polymerase II transcription subunit 10 (AHRD V3.3 *** S8C6L6_9LAMI) AT1G26665 Solyc08g065163.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3IMG1_NOCCA) Solyc08g150132.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA topoisomerase (AHRD V3.3 *-* A0A0K9QZR3_SPIOL) AT2G07505 Solyc08g065190.3 912 1111 2266 2114 558 556 544 475 579 1202 921 700 1442 859 567 Fe(2+) transport protein 3, chloroplastic (AHRD V3.3 *** A0A2G2YWQ8_CAPAN) AT1G10970 Solyc08g065193.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2Y582_CAPAN) Solyc08g150133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *-* A0A2G2WTQ6_CAPBA) Solyc08g065210.1 36 73 99 81 134 131 68 126 100 71 95 99 77 52 26 Unknown protein Solyc08g065220.3 2581 6705 2712 4831 7288 5383 5922 8245 7733 6350 2868 5325 4223 3263 4376 glycine decarboxylase p-protein AT4G33010 Solyc08g065230.1 441 274 400 452 373 381 322 374 416 486 351 352 307 387 364 serine/threonine-protein kinase EDR1-like (AHRD V3.3 *-* A0A2I4GPH3_9ROSI) Solyc08g065240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g065260.4 337 198 294 299 151 132 161 148 241 385 283 349 210 277 278 YCF36%2C putative (DUF1230) (AHRD V3.3 *** AT5G11840.1) AT5G11840 Solyc08g150134.1 2079 1517 1611 1565 1499 1799 1775 1207 1106 1138 1457 1473 1137 1390 1399 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc08g065320.3 428 197 278 260 152 218 237 168 150 358 578 172 102 173 370 green ripe-like 1 AT2G26070 Solyc08g065330.3 187 234 290 306 451 440 425 295 266 216 272 297 215 325 404 Calcineurin B-like 10 (AHRD V3.3 *** G4XMX1_SOLLC) AT4G33000 Solyc08g065350.4 785 420 513 504 442 394 423 333 438 408 323 373 416 447 595 Histone deacetylase (AHRD V3.3 *** A0A2G2Z7K8_CAPAN) AT5G26040 Solyc08g065360.3 434 243 246 361 210 236 212 178 342 281 235 259 283 237 403 K(+) efflux antiporter 6 (AHRD V3.3 *** A0A1J3DC07_NOCCA) AT2G19600 Solyc08g065370.1 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 Photosystem II D2 protein (AHRD V3.3 *** A0A1J3ICS2_NOCCA) Solyc08g065380.3 14 11 53 28 7 7 4 10 28 44 49 14 32 27 26 Transcription factor MYB1R1 (AHRD V3.3 *** A0A2I0WJG7_9ASPA) Solyc08g065385.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc08g065410.3 6 10 5 3 27 43 39 36 4 1 21 3 0 3 4 Abscisic acid receptor PYL3 (AHRD V3.3 *** A0A1U8ETR1_CAPAN) AT2G26040 Solyc08g065420.3 1392 1802 2572 2430 3924 4172 4571 3968 2407 2362 1921 2864 2662 2081 2125 bell-like homeodomain protein 4 AT4G32980 Solyc08g065430.3 147 322 774 420 394 434 376 380 479 609 721 434 348 227 682 Pollen-specific protein SF21 (AHRD V3.3 *** A0A1U8DRT3_CAPAN) AT5G11790 Solyc08g065440.4 553 685 671 682 1081 955 1007 968 660 546 657 863 628 737 441 SNF2 domain protein (AHRD V3.3 *** AT5G11780.1) AT5G11780 Solyc08g065443.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g065447.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g065450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 KH domain-containing protein (AHRD V3.3 --* AT2G25970.1) Solyc08g065470.4 228 297 315 341 369 304 321 266 276 209 331 278 363 341 310 ATP synthase subunit G mitochondrial-like (AHRD V3.3 *** A0A2K3PQ81_TRIPR) Solyc08g065480.3 365 451 409 314 297 254 246 244 347 445 225 263 632 497 417 Ferrochelatase (AHRD V3.3 *** A0A2G3BRU7_CAPCH) AT5G26030 Solyc08g065490.3 761 1197 788 812 771 860 781 791 786 656 607 681 1400 1164 687 Serine hydroxymethyltransferase (AHRD V3.3 *** A0A1U8DRR7_CAPAN) AT4G32520 Solyc08g065500.2 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1LRS6_ARTAN) AT5G26010 Solyc08g065510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *-* A0A2G2ZWH3_CAPAN) Solyc08g065520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *-* A0A2G2ZWH3_CAPAN) Solyc08g065530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G2ZWH3_CAPAN) Solyc08g065540.3 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1LRS6_ARTAN) AT5G26010 Solyc08g065543.1 15 5 24 24 13 19 17 6 9 11 2 2 12 10 41 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc08g065547.1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G2ZDR1_CAPAN) Solyc08g065580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *-* A0A2G2WNR8_CAPBA) Solyc08g065590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G2ZDR1_CAPAN) Solyc08g065600.1 538 357 200 382 77 33 26 77 100 267 319 158 240 327 183 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G3CTZ6_CAPCH) Solyc08g065610.3 4612 961 556 586 76 63 85 81 445 1443 643 347 433 613 866 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G2VI36_CAPBA) AT4G32940 Solyc08g065620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 9 (AHRD V3.3 *-* A0A0C5BKN3_9SOLA) Solyc08g065623.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc08g065627.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g065630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ferrochelatase (AHRD V3.3 *-* A0A2G3C6Z3_CAPCH) Solyc08g065640.3 2435 1718 3264 2955 2349 2764 2607 1663 1444 1963 2531 1723 2358 2313 3564 PITH domain-containing protein (AHRD V3.3 *** A0A1Q3BPB8_CEPFO) AT2G25950 Solyc08g065670.4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1LRS6_ARTAN) AT5G26010 Solyc08g065675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc08g065680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1LRS6_ARTAN) Solyc08g065690.1 4 0 4 0 0 0 0 0 0 0 0 0 0 0 8 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G2ZWH3_CAPAN) Solyc08g065695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc08g065700.3 4 0 0 0 0 1 0 0 0 0 1 0 1 0 0 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G2YF03_CAPAN) Solyc08g065705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc08g065710.2 0 0 0 0 2 2 2 0 2 2 29 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G2ZDR1_CAPAN) Solyc08g065730.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *-* A0A2G2ZDR1_CAPAN) Solyc08g065740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G2ZDR1_CAPAN) Solyc08g065750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G2ZDR1_CAPAN) Solyc08g065760.3 1558 1753 1119 1005 1210 1094 966 1277 831 1300 892 1158 1763 1319 941 Ribosomal L28 family (AHRD V3.3 *** A0A2U1PUF0_ARTAN) AT4G31460 Solyc08g065765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g065780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar processing enzyme (AHRD V3.3 *** Q9SMD0_SOLLC) Solyc08g065790.3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 vacuolar processing enzyme Solyc08g065800.1 800 838 1225 1135 968 1308 1362 862 709 756 1051 809 1012 1052 1197 MATH domain and coiled-coil domain-containing protein At3g58360-like isoform X1 (AHRD V3.3 *-* XP_022872251.1) Solyc08g065810.1 9 15 5 13 7 11 17 30 5 7 5 4 5 17 18 Transcription factor jumonji (JmjC) domain-containing protein (AHRD V3.3 *-* C0SUU8_ARATH) Solyc08g065820.3 135 124 80 100 95 119 182 106 130 82 72 85 84 125 78 Transcription factor jumonji (JmjC) domain-containing protein (AHRD V3.3 *-* Q8VYB9_ARATH) Solyc08g065830.4 54 90 239 99 115 178 139 106 86 60 250 55 126 106 167 Lysine-specific demethylase JMJ25 (AHRD V3.3 *-* A0A1J3HZ68_NOCCA) Solyc08g065840.3 797 468 576 543 631 632 540 469 538 497 523 635 508 556 972 DUF1639 domain-containing protein (AHRD V3.3 *-* A0A1Q3CFA8_CEPFO) Solyc08g065850.1 502 1256 1450 2207 2651 2773 3535 2370 745 776 2473 2088 1401 1152 1134 Unknown protein Solyc08g065860.3 711 650 694 729 604 641 594 511 465 570 748 607 753 672 930 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MN76_TRIPR) AT5G11730 Solyc08g065870.4 1689 731 1066 888 505 540 557 515 792 1032 1234 908 683 848 1248 protein EARLY FLOWERING 3 (AHRD V3.3 *** A0A2I4FS73_9ROSI) AT2G25930 Solyc08g065880.3 1047 788 902 1024 656 684 706 694 981 1015 911 916 1153 1126 1068 3'-5' exonuclease domain-containing protein (AHRD V3.3 *** A0A2U1N5U9_ARTAN) AT2G25910 Solyc08g065890.3 5610 4433 4667 5496 4559 4410 4371 4174 4407 4629 4552 4138 3932 4483 6204 Clathrin interactor EPSIN 1 (AHRD V3.3 *** A0A2G2YWX6_CAPAN) AT5G11710 Solyc08g065900.4 1199 1183 1157 1178 1311 1221 1277 1261 1438 1050 1158 1080 1290 1244 1502 Vacuolar protein sorting-associated protein 32 (AHRD V3.3 *** A0A2U1MKD2_ARTAN) Solyc08g065910.1 0 0 6 3 6 1 5 8 5 4 1 0 8 0 0 blind-like5 Solyc08g065940.4 10282 3702 2771 3514 1702 1545 1679 1212 3201 11194 3946 3713 3917 3061 5872 Zinc finger CCCH domain-containing protein 20 (AHRD V3.3 *** A0A1U8E1G0_CAPAN) Solyc08g065970.3 694 464 357 443 438 376 371 362 523 665 494 437 455 430 560 RNA polymerase sigma factor (AHRD V3.3 *** E4MW42_EUTHA) AT3G53920 Solyc08g065980.3 4174 2826 4300 4142 2954 3741 3639 2465 2656 3100 4140 2787 2689 3465 4154 glycine-rich protein (AHRD V3.3 *** AT4G32920.3) AT5G11700 Solyc08g065990.3 1032 721 654 598 536 521 558 456 561 598 673 619 706 707 607 Cytosolic Fe-S cluster assembly factor narfl (AHRD V3.3 *** A0A2S1CF11_PRUYE) AT4G16440 Solyc08g066000.2 352 303 376 381 298 453 443 368 375 309 465 289 300 406 347 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* A0A2U1QEQ4_ARTAN) Solyc08g066010.2 297 361 257 240 393 292 336 521 528 345 189 328 240 322 309 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1QEQ4_ARTAN) AT4G32820 Solyc08g066020.3 74 172 135 169 211 227 204 181 160 135 233 151 139 198 204 Long chain base biosynthesis protein 1 (AHRD V3.3 *** A0A1U8GFH6_CAPAN) AT4G36480 Solyc08g066030.3 856 513 472 479 371 465 461 370 345 329 428 287 443 411 593 Caveolin-1 protein (AHRD V3.3 *** F4I2E7_ARATH) AT1G20890 Solyc08g066040.1 49 18 47 30 40 64 50 26 30 10 31 27 19 35 25 Oleosin (AHRD V3.3 *** A0A2I4GNJ1_9ROSI) Solyc08g066050.3 115 785 792 1177 1953 1977 2104 1918 763 474 815 1108 137 524 361 Protein kinase domain (AHRD V3.3 *** A0A200QDK0_9MAGN) AT4G32830 Solyc08g066060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g066063.1 4 0 1 0 0 1 2 0 4 3 0 1 1 1 0 Endoribonuclease Dicer-like protein 3 (AHRD V3.3 *-* A0A2G3BS48_CAPCH) Solyc08g066067.1 43 5 0 10 3 2 1 0 5 6 8 7 1 10 8 ATP-dependent 6-phosphofructokinase (AHRD V3.3 *-* A0A1U8F3J4_CAPAN) Solyc08g066070.1 1846 1090 826 823 732 729 654 831 1116 1521 1009 1011 788 832 844 leucine zipper Z12127 AT5G58430 Solyc08g066100.3 0 0 0 2 0 0 3 3 1 0 0 0 2 0 0 ATP-dependent 6-phosphofructokinase (AHRD V3.3 *** A0A2G2YWK4_CAPAN) AT4G26270 Solyc08g066110.3 978 1364 1486 1350 1336 1299 1255 1401 1379 1209 1204 1236 1572 1427 1283 Profilin (AHRD V3.3 *** A0A2G2W5D3_CAPBA) AT2G19760 Solyc08g066120.4 462 504 335 279 353 334 352 556 521 545 230 448 341 456 317 Polyribonucleotide nucleotidyltransferase (AHRD V3.3 *** A0A2U1LJN3_ARTAN) AT3G03710 Solyc08g066140.3 1013 915 1020 789 831 957 994 801 749 684 989 628 818 912 940 Polyribonucleotide nucleotidyltransferase (AHRD V3.3 *-* A0A2U1LJN3_ARTAN) Solyc08g066130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g066150.1 62 38 56 64 40 52 40 39 27 37 56 30 21 28 58 Unknown protein Solyc08g066160.3 461 297 357 401 358 292 325 371 392 488 477 350 332 341 432 Early nodulin-93 (AHRD V3.3 *** A0A1U8DU22_CAPAN) AT5G25940 Solyc08g066170.3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 early nodulin-93-like (AHRD V3.3 *** XP_019070841.1) Solyc08g066180.3 1043 1784 1761 1897 2442 2505 2827 2485 1697 1799 1501 1962 1480 1465 1721 Haloacid dehalogenase-like hydrolase family protein (AHRD V3.3 *** A0A2U1QHW6_ARTAN) AT2G25870 Solyc08g066190.2 0 2 2 4 3 15 11 3 3 1 8 4 6 9 0 Cyclin-D-binding Myb-like transcription factor 1 (AHRD V3.3 *-* A0A1J3E546_NOCCA) AT5G41020 Solyc08g066200.3 2691 1923 1598 1617 1521 1634 1576 1939 1926 2025 1436 1814 1630 1794 1524 Nuclear poly(A) polymerase 4 (AHRD V3.3 *** A0A2G3BS01_CAPCH) AT4G32850 Solyc08g066210.3 1067 767 1041 691 509 518 372 500 760 861 1247 560 1000 675 1038 receptor-like protein kinase HSL1 (AHRD V3.3 *** A0A2G2YX65_CAPAN) AT5G25930 Solyc08g066220.4 2 9 3 15 0 0 4 0 6 2 16 7 12 5 0 Serine decarboxylase (AHRD V3.3 *** A0A2G3AU85_CAPCH) Solyc08g066230.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g066240.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histidine decarboxylase Solyc08g066250.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine decarboxylase (AHRD V3.3 *** A0A2G2VBA7_CAPBA) Solyc08g066260.3 3 0 0 4 24 16 40 14 0 0 0 0 0 0 0 Serine decarboxylase (AHRD V3.3 *** A0A2G2VBA7_CAPBA) Solyc08g066270.3 5 1 16 11 0 4 4 0 2 7 11 3 10 21 0 receptor-like protein kinase HSL1 (AHRD V3.3 *** A0A1U7YIB3_NICSY) Solyc08g066290.3 46 36 92 48 46 44 56 36 45 40 88 24 64 76 93 Unknown protein Solyc08g066300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein kinase HSL1 (AHRD V3.3 *** A0A1S4BQF8_TOBAC) Solyc08g066310.3 343 248 224 164 22 33 11 32 144 336 244 81 430 161 142 Receptor-like protein kinase (AHRD V3.3 *-* A0A2D1PG71_9ROSI) Solyc08g066320.4 110 65 90 29 25 13 13 13 40 79 178 68 59 36 42 receptor-like protein kinase HSL1 (AHRD V3.3 *** A0A1U7YIB3_NICSY) Solyc08g066330.3 614 679 776 669 558 530 490 742 725 973 605 741 712 717 700 LEY17225 cyclin-dependent protein kinase A-1 Solyc08g066335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g066350.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histidine-containing phosphotransfer protein 4 (AHRD V3.3 *** A0A2G2YI23_CAPAN) AT3G16360 Solyc08g066355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0W6G5_9ASPA) ATMG00810 Solyc08g066360.3 223 1015 1215 1063 1421 1478 1385 1489 1303 780 852 1231 660 939 604 Malic enzyme (AHRD V3.3 *** A0A2G2W5J3_CAPBA) Solyc08g150135.1 0 2 0 0 0 2 1 1 0 0 0 0 0 1 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc08g066390.3 258 218 346 263 255 252 286 204 216 203 222 224 310 294 251 SAWADEE HOMEODOMAIN protein (AHRD V3.3 *** A0A178W211_ARATH) Solyc08g066400.3 386 372 358 399 386 485 405 369 386 375 384 428 463 418 308 Protein kinase family protein (AHRD V3.3 *** F4ISN5_ARATH) AT3G03930 Solyc08g066405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3MRD5_TRIPR) Solyc08g066420.1 288 237 49 117 349 292 262 340 130 138 82 95 146 92 40 Polyketide cyclase/dehydrase and lipid transport superfamily protein (AHRD V3.3 *** A0A2U1PZR8_ARTAN) AT2G25770 Solyc08g066430.1 103 59 103 72 36 23 20 11 40 59 55 21 161 62 84 Polyketide cyclase/dehydrase and lipid transport superfamily protein (AHRD V3.3 *** A0A2U1M5K6_ARTAN) AT4G32870 Solyc08g066440.3 538 404 458 335 384 360 299 402 344 498 364 341 392 359 287 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9LYG5_ARATH) AT5G11650 Solyc08g066450.1 0 0 0 0 0 0 0 2 0 0 3 0 0 0 8 DUF1677 family protein (DUF1677) (AHRD V3.3 *** Q8GW85_ARATH) AT5G25840 Solyc08g066460.3 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 DUF1677 domain-containing protein (AHRD V3.3 *** A0A1Q3BBV1_CEPFO) AT2G25780 Solyc08g066480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb_DNA-bind_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3B429_CEPFO) Solyc08g066485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc08g066490.3 669 1232 1022 940 1212 1203 1090 1426 1162 769 919 1239 1155 1191 945 Inactive leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A314L0X6_NICAT) AT2G25790 Solyc08g066495.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) ATMG00810 Solyc08g066500.4 530 835 1310 1221 616 532 532 547 1778 591 828 557 900 1166 1464 Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H964_ZINVI) Solyc08g066510.3 8 56 30 16 34 38 44 30 28 18 29 37 46 16 30 GATA transcription factor (AHRD V3.3 *** K4CLM7_SOLLC) AT5G25830 Solyc08g066520.3 398 633 626 546 703 615 585 676 318 459 504 602 764 587 484 BnaA10g30120D protein (AHRD V3.3 *** A0A078JT83_BRANA) AT5G11630 Solyc08g066530.4 59 388 282 310 633 417 483 627 425 263 269 378 263 323 186 acid phosphatase 1-like (AHRD V3.3 *** A0A1U7Y8Z9_NICSY) AT4G29260 Solyc08g066540.3 600 680 777 747 795 674 707 594 620 591 481 672 677 696 615 Peptidyl-tRNA hydrolase (AHRD V3.3 *** A0A200RC13_9MAGN) AT4G32900 Solyc08g066550.3 43 27 96 133 26 50 43 40 25 84 75 26 14 60 39 Zinc finger protein (AHRD V3.3 *** A0A200QDI2_9MAGN) AT5G11620 Solyc08g066560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g066570.3 845 502 968 800 457 514 627 538 760 682 773 791 588 800 1155 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A1P8BG13_ARATH) AT5G11580 Solyc08g066580.4 4539 3601 4148 4539 3396 3771 4048 3092 2664 2816 3370 3174 3526 4012 4220 Nuclear pore complex protein NUP85 (AHRD V3.3 *** A0A2G2W614_CAPBA) AT4G32910 Solyc08g066590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late embryogenesis abundant protein-related / LEA protein-like protein (AHRD V3.3 *-* A0A178VGJ3_ARATH) AT3G19430 Solyc08g066600.4 1057 1603 1585 1764 1981 1903 1993 2406 2004 1649 1513 1626 1392 1559 1576 DUF810 domain-containing protein (AHRD V3.3 *** A0A1Q3BC95_CEPFO),Pfam:PF05664 AT2G25800 Solyc08g066610.3 17 160 133 85 131 181 207 125 160 59 180 77 57 95 96 EPIDERMAL PATTERNING FACTOR-like protein 9 (AHRD V3.3 *** A0A2G2WD44_CAPBA) Solyc08g066620.3 903 554 493 551 425 498 540 400 460 558 416 409 483 492 650 Cystathionine beta-lyase (AHRD V3.3 *-* A0A1U8EBG6_CAPAN) Solyc08g066625.1 0 3 0 0 0 1 0 4 1 0 0 0 0 1 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2Y582_CAPAN) Solyc08g066630.2 43 24 50 33 98 45 56 53 31 51 14 34 32 26 23 Leucine-rich repeat, cysteine-containing subtype (AHRD V3.3 *-* A0A2U1NBU2_ARTAN) Solyc08g066640.3 206 248 204 233 196 228 218 180 212 145 192 158 281 303 302 YebC/PmpR family DNA-binding transcriptional regulator (AHRD V3.3 *** A0A369LDE1_9ACTN) AT2G25830 Solyc08g066650.3 0 0 0 0 1 0 1 0 0 0 0 0 9 0 1 Carotenoid Cleavage Dioxygenase 8 AT4G32810 Solyc08g066660.1 128 81 67 157 137 101 115 113 193 264 167 90 155 58 93 Ethylene-responsive transcription factor TINY (AHRD V3.3 *** A0A2G2W633_CAPBA) AT5G11590 Solyc08g066670.3 73 142 123 181 68 64 88 55 137 155 143 120 201 162 297 Exostosin-like (AHRD V3.3 *** A0A200QDL7_9MAGN) Solyc08g066680.3 1066 832 1227 1057 911 1117 1147 829 842 750 954 818 1044 1019 1288 Exostosin-like (AHRD V3.3 *** A0A200QDL7_9MAGN) AT5G25820 Solyc08g066690.4 37 31 22 29 0 4 1 3 8 30 43 25 24 36 75 Exostosin-like (AHRD V3.3 *** A0A200RC21_9MAGN) Solyc08g066700.3 863 756 836 676 484 680 800 474 481 377 780 552 785 818 874 Exosome complex exonuclease RRP46-like protein (AHRD V3.3 *** A0A1U8GGL3_CAPAN) AT3G46210 Solyc08g066705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gag-pol polyprotein (AHRD V3.3 *** E6Y5Q4_SOLLC) Solyc08g066710.2 0 1 0 0 6 2 3 2 0 0 0 0 6 3 1 carotenoid 9,10(9',10')-cleavage dioxygenase 1-like (AHRD V3.3 *-* A0A2I4GNF3_9ROSI) Solyc08g066720.3 13 7 0 9 38 30 56 20 2 1 0 0 60 12 7 9-cis-epoxycarotenoid dioxygenase (AHRD V3.3 *** A4URT6_9ROSI) Solyc08g066730.3 16417 7032 3463 3860 2457 2240 2022 2806 3398 5324 3645 4524 3283 4350 4238 N6-adenosine-methyltransferase MT-A70-like (AHRD V3.3 *** A0A2G3BS80_CAPCH) AT4G10760 Solyc08g066740.3 28 110 269 102 163 184 158 104 95 111 247 71 57 101 32 Early nodulin-like protein 1 (AHRD V3.3 *** A0A1J3CHP6_NOCCA) AT1G64640 Solyc08g066750.3 107 528 641 594 811 738 740 773 610 481 514 792 493 515 674 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1QCK3_ARTAN) Solyc08g066760.4 42 19 34 11 4 6 5 1 8 6 12 3 34 15 20 Ankyrin repeat (AHRD V3.3 *** A0A200QDM7_9MAGN) Solyc08g066770.3 340 173 156 124 7 6 5 1 72 105 207 40 346 188 319 Ankyrin repeat (AHRD V3.3 *** A0A200QDM7_9MAGN) AT1G10340 Solyc08g066780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g066790.4 374 341 412 262 133 117 118 88 242 388 347 160 529 308 216 Phospholipase D (AHRD V3.3 *** K4CLQ5_SOLLC) Solyc08g066800.4 743 892 520 959 499 615 558 567 946 718 834 367 1115 566 1171 phospholipase D Solyc08g066810.3 8 40 49 81 67 75 105 38 40 51 221 59 1 19 196 Cellulase (Glycosyl hydrolase family 5) protein (AHRD V3.3 *** Q9LTN0_ARATH) AT1G13130 Solyc08g066820.3 1095 1259 1142 1030 1099 1180 1179 1174 993 1099 847 936 1361 1277 994 Choline/Ethanolamine kinase (AHRD V3.3 *** A0A200PQG5_9MAGN),Pfam:PF01633 AT2G26830 Solyc08g066840.3 473 1809 2265 2050 1529 1494 1292 1525 2915 1823 2157 1197 2318 1414 2873 tonoplast intrinsic protein 4.1 AT2G25810 Solyc08g066850.3 247 319 454 480 507 507 528 506 460 352 378 383 304 354 352 Lactoylglutathione lyase (AHRD V3.3 *** A0A1U8DS55_CAPAN) Solyc08g066860.2 28 139 63 105 183 140 112 98 169 71 131 57 90 72 214 Auxin canalization protein (DUF828) (AHRD V3.3 *** Q9LUI0_ARATH) Solyc08g066870.4 2023 1428 1422 1261 1055 1045 1002 980 1065 1785 1232 1031 1894 1492 1276 Casein kinase I isoform delta (AHRD V3.3 *** A0A2G2W5P3_CAPBA) Solyc08g066890.4 31 190 163 124 616 512 499 476 191 255 220 254 227 83 46 bark storage protein A-like (AHRD V3.3 *** A0A2I4E5T4_9ROSI) AT4G28940 Solyc08g066900.1 0 0 0 0 0 0 0 0 0 2 4 0 0 1 20 Phosphorylase superfamily protein (AHRD V3.3 *-* A0A2U1QDE8_ARTAN) Solyc08g066910.1 290 300 270 324 302 251 320 294 396 394 395 292 216 374 266 Unknown protein Solyc08g066920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ADP,ATP carrier protein (AHRD V3.3 *-* A0A2G2Y8J4_CAPAN) Solyc08g066923.1 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 bark storage protein A-like (AHRD V3.3 *** A0A2I4HS28_9ROSI) Solyc08g066927.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) ATMG00240 Solyc08g066930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nucleoside phosphorylase (AHRD V3.3 *-* A0A2U1MN31_ARTAN) Solyc08g066940.4 722 555 774 810 757 747 750 658 1028 1041 1186 1058 821 809 964 Protein NRT1/ PTR FAMILY 1.2 (AHRD V3.3 *** A0A1J3FWJ0_NOCCA) Solyc08g066950.3 420 400 397 419 347 357 375 355 481 361 456 349 489 455 467 1-deoxy-D-xylulose 5-phosphate synthase 1 (AHRD V3.3 *** Q8L693_MEDTR) AT5G11380 Solyc08g066960.3 1 8 8 7 19 12 7 30 4 2 10 17 4 5 0 HCO3-transporter family (AHRD V3.3 *** A0A2U1LER8_ARTAN) Solyc08g066970.2 81 75 48 51 76 44 47 91 85 101 78 44 75 64 21 Nucleotide/sugar transporter family protein (AHRD V3.3 *-* A0A2U1NJJ9_ARTAN) Solyc08g066980.4 332 304 418 314 201 331 331 249 171 262 320 182 294 360 424 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2U1NJJ9_ARTAN) Solyc08g066990.4 0 0 9 3 5 15 7 6 6 0 8 3 0 9 0 Potassium channel AKT1 (AHRD V3.3 *** A0A2G3CSD6_CAPCH) Solyc08g067000.3 23 130 265 128 128 120 139 133 128 58 194 73 118 111 176 muscle M-line assembly protein unc-89 (AHRD V3.3 --* XP_006832891.1) AT3G56810 Solyc08g067020.4 899 1962 1906 1796 2291 1832 2051 2036 1724 1351 1473 1648 2516 2262 1741 Cytochrome b-c1 complex subunit 7 (AHRD V3.3 *** A0A1U8E2B0_CAPAN) AT5G25450 Solyc08g067025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc08g067030.3 1736 7012 3662 7111 9245 7237 7426 8876 8629 9220 4230 4729 4873 3387 8160 DUF642 domain-containing protein (AHRD V3.3 *** A0A1Q3BRG3_CEPFO) AT5G11420 Solyc08g067040.4 6316 5573 4122 5469 5144 4465 5273 6480 4454 6521 4670 5845 5664 5156 3719 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A1P8BCJ2_ARATH) AT5G13480 Solyc08g067050.3 472 957 688 765 849 1095 1148 956 557 414 495 657 754 663 577 Protein arginine N-methyltransferase (AHRD V3.3 *** A0A200PQK4_9MAGN) AT1G04870 Solyc08g067060.2 661 604 356 529 435 442 506 533 565 519 393 548 380 598 393 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PQQ2_9MAGN) AT3G54980 Solyc08g067070.3 285 241 222 193 223 305 319 271 204 225 228 206 217 267 172 cytosine-5 DNA methyltransferaseL AT5G25480 Solyc08g067080.3 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 Ammonium transporter (AHRD V3.3 *** A0A1U8E298_CAPAN) Solyc08g067090.4 4454 4845 4191 3587 3497 4380 4517 4376 4800 3069 3954 3984 5369 5517 4796 cyclophilin-like protein AT4G32420 Solyc08g067100.2 1454 1223 1493 1527 752 622 634 724 1221 1621 1742 821 1028 1105 1662 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1P524_ARTAN) AT5G10770 Solyc08g067120.3 1 0 0 1 0 1 1 0 0 0 0 1 1 0 1 DnaJ protein P58IPK-like protein (AHRD V3.3 *-* A0A2G3BJC2_CAPCH) Solyc08g150136.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxisome biogenesis protein 2 (AHRD V3.3 *-* A0A2G2X6N8_CAPBA) Solyc08g067125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc08g067127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc08g067140.1 7 7 3 6 2 2 1 5 1 2 0 1 18 4 0 hypothetical protein (AHRD V3.3 --* AT1G02990.6) Solyc08g067150.4 963 2194 1818 2123 2765 2739 2998 2795 1990 1372 1742 2019 1695 2350 1547 CRC domain-containing protein TSO1 (AHRD V3.3 *** A0A2G3BRZ7_CAPCH) Solyc08g067160.3 107 272 266 250 163 176 166 148 154 123 163 198 205 291 199 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1QI56_ARTAN) Solyc08g067165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc08g067170.3 0 1 20 3 1 3 2 3 2 0 5 1 0 0 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A0D3F596_9ORYZ) Solyc08g067180.4 170 920 1082 846 1711 1440 1487 1276 674 711 1068 907 930 931 762 Zinc finger protein (AHRD V3.3 *** A0A200PQI4_9MAGN) AT3G15680 Solyc08g150137.1 32 16 11 28 43 20 19 20 12 16 13 15 28 37 15 Unknown protein Solyc08g067190.4 334 363 316 285 283 358 398 429 263 221 155 328 253 340 285 Anaphase-promoting complex subunit 5 (AHRD V3.3 *** A0A2G2W608_CAPBA) AT1G06590 Solyc08g067200.2 26 30 16 12 28 12 21 55 41 31 11 45 16 27 12 Dicer-like protein 3 (AHRD V3.3 *-* X4Y6L7_SOLLC) Solyc08g067210.3 940 828 824 623 733 764 783 932 880 780 713 892 691 847 650 Dicer-like 3 AT3G43920 Solyc08g067220.1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 Floral homeotic protein FBP1 (AHRD V3.3 *-* FBP1_PETHY) Solyc08g067230.4 550 766 577 633 133 181 74 75 107 379 54 311 5 534 58 MADS-box transcription factor (AHRD V3.3 *** F1T120_9ERIC) Solyc08g067240.4 347 360 434 491 484 414 451 443 363 432 339 452 377 368 357 BRCT domain DNA repair protein (AHRD V3.3 *** F4ITP1_ARATH) AT3G43930 Solyc08g067250.4 502 637 478 700 789 907 846 904 503 637 369 739 363 556 319 DNA cross-link repair protein SNM1 (AHRD V3.3 *** A0A2I4EZZ1_9ROSI) AT2G45700 Solyc08g067260.4 1908 1684 1668 1525 1180 1277 837 1226 2036 1759 1807 1910 1267 1484 1132 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A1U8DS82_CAPAN) AT2G26250 Solyc08g067270.3 224 159 118 300 126 174 215 154 107 124 145 140 156 168 147 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* AT5G21280.1) AT5G21280 Solyc08g067280.1 42 66 50 57 22 77 66 36 35 42 26 25 33 42 78 Unknown protein Solyc08g067290.3 271 527 527 591 507 508 447 512 696 469 428 531 558 628 348 RING U-box superfamily protein (AHRD V3.3 *-* A0A0U9HLC9_KLENI) AT5G20910 Solyc08g067300.1 51 99 181 128 94 80 92 65 72 41 209 59 110 92 196 F-box family protein (AHRD V3.3 *** A0A1P8B768_ARATH) AT4G33160 Solyc08g067310.1 0 3 2 2 0 3 1 0 5 4 5 5 2 0 21 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2W7U9_CAPBA) AT5G10930 Solyc08g067320.3 154 258 240 165 626 905 1046 414 274 310 244 197 343 181 208 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *-* A0A2G3D4H8_CAPCH) Solyc08g067330.1 130 299 194 213 646 796 1012 616 404 525 258 256 504 168 178 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *-* A0A2G2W7Q4_CAPBA) Solyc08g067340.4 2519 2298 967 160 0 0 0 1 282 838 1804 15 4230 1942 1747 WRKY transcription factor 46 Solyc08g067350.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g067360.3 133 236 5 6 0 2 0 0 2 108 56 0 449 120 140 WRKY transcription factor 45 Solyc08g067370.1 1646 4334 3406 8800 3195 2276 2261 2595 2418 4910 3550 1928 4478 3567 4218 serine/arginine repetitive matrix protein (AHRD V3.3 *-* AT2G46630.1) Solyc08g067380.1 4 3 3 2 1 4 2 3 1 4 3 5 1 6 3 disease resistance protein (AHRD V3.3 *-* XP_024030761.1) Solyc08g067390.4 187 488 510 506 568 547 668 567 540 407 829 353 519 366 605 EG45-like domain containing protein (AHRD V3.3 *** A0A2I4GVG0_9ROSI) Solyc08g067400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g067405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase MAK (AHRD V3.3 *-* A0A2G2XMD0_CAPBA) Solyc08g067410.2 478 351 624 558 424 343 422 308 515 619 720 366 519 509 856 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G2VGN5_CAPBA) AT2G26640 Solyc08g067420.4 1868 1372 993 1046 896 868 1023 919 1041 1078 687 1018 1092 1377 1026 DNAse I-like superfamily protein (AHRD V3.3 *-* A0A178UDZ2_ARATH) AT5G11350 Solyc08g067430.4 409 244 302 305 224 188 255 238 215 342 310 195 240 234 346 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** AT2G25605.1) AT2G25605 Solyc08g067440.2 7 10 25 20 22 31 47 26 13 15 21 17 2 6 28 N-alpha-acetyltransferase 50 (AHRD V3.3 *** A0A1U8DSA6_CAPAN) AT5G11340 Solyc08g067450.1 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1NU41_ARTAN) Solyc08g067460.1 1 0 0 0 0 1 0 0 1 2 0 1 0 0 0 Pre-mRNA-splicing factor syf2 (AHRD V3.3 *** A0A1J3JVC4_NOCCA) Solyc08g067470.3 693 434 452 413 361 448 431 376 469 484 612 488 490 536 675 6-hydroxynicotinate 3-monooxygenase (AHRD V3.3 *** A0A1J3E208_NOCCA) AT5G11330 Solyc08g067480.4 174 548 726 608 512 606 630 537 484 382 501 453 587 534 544 V-ATPase proteolipid subunit (AHRD V3.3 *** A0A200Q0M0_9MAGN) AT2G25610 Solyc08g067490.1 0 3 6 0 4 7 0 0 2 1 0 0 1 1 0 CW-type Zinc Finger (AHRD V3.3 *-* F4IZK5_ARATH) Solyc08g067500.1 0 0 13 19 30 29 25 26 9 7 2 8 0 1 17 Non-specific lipid-transfer protein (AHRD V3.3 *** K4CLX6_SOLLC) AT3G08770 Solyc08g067510.1 96 116 244 270 471 445 575 359 292 129 134 215 176 181 132 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A1U8HFE5_CAPAN) AT5G59320 Solyc08g067520.1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** K4CLX8_SOLLC) AT3G08770 Solyc08g067530.1 82 520 767 1046 381 555 443 429 867 298 600 878 505 586 523 Non-specific lipid-transfer protein (AHRD V3.3 *** K4CLX9_SOLLC) AT3G08770 Solyc08g067540.1 79 52 23 85 14 19 16 21 53 48 56 38 23 8 58 Non-specific lipid-transfer protein (AHRD V3.3 *** K4CLY0_SOLLC) Solyc08g067550.1 7 0 2 7 1 5 13 2 2 3 0 0 2 0 1 Non-specific lipid-transfer protein (AHRD V3.3 *** K4CLY1_SOLLC) AT3G08770 Solyc08g067560.2 2 3 0 2 0 2 0 1 0 0 0 0 0 2 0 Unknown protein Solyc08g067570.1 13 3 3 2 1 3 5 2 13 6 0 2 0 8 3 CW-type Zinc Finger (AHRD V3.3 *-* F4IZK5_ARATH) Solyc08g067580.3 62 34 46 37 2 6 12 7 25 40 47 26 24 53 33 Unknown protein Solyc08g067590.1 458 168 273 216 199 216 245 143 161 110 269 129 136 256 268 CW-type Zinc Finger (AHRD V3.3 *-* AT3G62900.3) Solyc08g067600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g067610.3 132 58 86 59 10 1 9 2 33 38 65 44 64 177 113 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) Solyc08g067620.2 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) Solyc08g067630.3 257 94 69 103 31 19 6 13 8 164 108 49 21 186 494 histone deacetylase-like protein (AHRD V3.3 *** AT2G25625.2) AT2G25625 Solyc08g067640.1 1 1 1 9 1 1 0 1 1 3 1 0 1 4 20 Unknown protein Solyc08g067650.2 36 14 7 13 2 3 0 7 6 4 4 6 27 6 19 Pumilio-like protein 1 (AHRD V3.3 *-* A0A2G2VZ82_CAPBA) Solyc08g067670.3 22 16 8 4 6 3 6 2 7 4 1 3 9 7 1 Unknown protein Solyc08g067690.2 0 0 6 6 0 0 0 0 0 0 0 0 7 2 0 Unknown protein Solyc08g067700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D2 (AHRD V3.3 *-* A0A2K3LJN2_TRIPR) Solyc08g067710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g067730.2 129 82 70 91 41 64 99 47 55 67 68 55 65 77 94 Unknown protein Solyc08g067740.4 49 30 17 34 18 27 35 33 36 18 39 24 34 44 37 Unknown protein Solyc08g067750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal RNA small subunit methyltransferase NEP1 (AHRD V3.3 *-* A0A2G2YY18_CAPAN) Solyc08g067760.4 0 14 5 7 0 3 2 3 0 0 6 0 2 0 1 MLO-like protein (AHRD V3.3 *** K4CM00_SOLLC) AT2G33670 Solyc08g067765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3LWA1_TRIPR) Solyc08g067770.3 2214 1648 2275 1386 1079 1120 1033 1231 1430 2246 1606 1199 1771 1625 1254 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NXH1_ARTAN) AT4G32600 Solyc08g083450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** W0FG45_POPTR) AT5G05260 Solyc08g067795.2 2 1 3 9 5 4 7 3 12 3 1 15 2 4 29 DnaJ protein like (AHRD V3.3 *** A0A2I0WJV4_9ASPA) AT5G25530 Solyc08g067790.4 4229 3880 2898 2952 3238 2871 3009 3416 3242 3168 2462 3119 3896 4045 2662 SPOC domain / Transcription elongation factor S-II protein (AHRD V3.3 *** A0A2U1NXE4_ARTAN) AT5G25520 Solyc08g067793.1 6 2 16 4 5 11 3 8 1 3 12 1 7 4 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U7YHT5_NICSY) Solyc08g067796.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *-* A0A2R6RNV3_ACTCH) Solyc08g067797.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1S3ZVQ5_TOBAC) AT2G33030 Solyc08g067800.3 186 244 242 352 369 285 311 356 175 297 268 276 223 209 209 Acetyltransferase (AHRD V3.3 *** A0A2G2YXI4_CAPAN) AT1G77540 Solyc08g067810.3 196 176 171 193 143 136 138 124 110 160 150 113 225 187 225 Ctc-interacting domain 6 (AHRD V3.3 *** A0A2K3NAR3_TRIPR) AT5G25540 Solyc08g067820.3 829 786 943 948 740 788 841 612 583 601 985 653 815 738 1058 RNA-binding protein 48 (AHRD V3.3 *** A0A2I4DDN3_9ROSI) AT2G27790 Solyc08g067830.3 237 436 458 541 502 607 650 450 339 267 423 354 565 557 613 Transmembrane protein 18 (AHRD V3.3 *** A0A200QPB6_9MAGN) AT1G34350 Solyc08g067840.3 135 246 452 332 423 383 453 353 316 181 301 336 264 401 322 Photosystem II reaction center PsbP family protein (AHRD V3.3 *** A0A0F7GYP2_9ROSI) AT5G11450 Solyc08g067860.2 1005 1009 1021 1216 839 937 1013 814 991 761 1081 738 941 990 1158 embryo defective 2410 (AHRD V3.3 *** AT2G25660.3) AT2G25660 Solyc08g067870.2 91 138 115 85 135 87 86 190 191 121 75 89 99 152 125 embryo defective 2410 (AHRD V3.3 *** AT2G25660.4) Solyc08g067880.4 1172 1251 1354 1094 1101 1344 1061 991 1169 652 1512 932 1730 1735 1970 hypothetical protein (AHRD V3.3 *-* AT2G25670.2) Solyc08g150138.1 926 894 1031 677 630 752 619 692 752 487 809 584 1265 1024 1140 hypothetical protein (AHRD V3.3 *** AT2G25670.2) Solyc08g067910.3 2636 2314 2514 2200 1943 2027 2011 2021 2202 2335 2213 1888 2394 2313 2373 Syntaxin (AHRD V3.3 *** A0A2G3BSP3_CAPCH) AT3G24350 Solyc08g067920.3 1787 1626 1754 1599 1466 1881 1612 1398 1821 1540 1760 1477 1553 1748 1975 Enhancer of polycomb-like protein (AHRD V3.3 *-* A0A2I4HB21_9ROSI) AT4G32620 Solyc08g067930.4 0 2 4 2 0 3 3 0 2 2 1 2 5 0 0 Arf GTPase activating protein (AHRD V3.3 *-* A0A200PNF3_9MAGN) Solyc08g067935.1 1 4 2 0 0 0 0 0 0 9 0 6 0 1 0 Unknown protein Solyc08g067940.3 58 86 298 166 65 78 67 46 75 137 228 158 96 118 92 thionin-like protein 2 (AHRD V3.3 -** XP_021609289.1) Solyc08g067950.3 8084 5132 3813 4323 2841 3243 3200 2688 2941 3893 3331 3238 4243 3878 4082 50S ribosomal protein L17 (AHRD V3.3 *** A0A2G2XPV0_CAPBA) AT5G09770 Solyc08g067960.3 3266 1155 1116 1386 296 428 484 255 712 660 1022 506 691 1315 2067 CHY-type/CTCHY-type/RING-type Zinc finger protein (AHRD V3.3 *** A0A2U1Q2D4_ARTAN) AT5G25560 Solyc08g067970.3 492 804 840 917 1530 1384 1052 1417 699 613 739 964 1390 1167 1025 DUF581 domain-containing protein (AHRD V3.3 *** A0A1Q3C6U0_CEPFO) AT5G11460 Solyc08g067980.3 0 4 5 0 9 3 6 15 4 4 1 7 5 9 11 polyamine-modulated factor 1-binding protein (AHRD V3.3 *** AT5G25570.2) Solyc08g067990.3 0 12 21 6 8 20 24 15 5 15 9 10 11 2 1 Subtilisin-like protease (AHRD V3.3 *** A0A1J3GF32_NOCCA) Solyc08g068000.3 0 1 0 0 0 2 2 0 0 1 0 5 1 0 0 Potassium channel protein (AHRD V3.3 *** F4JV33_ARATH) AT4G32650 Solyc08g068010.2 931 1029 908 1324 1070 1243 1305 1134 1152 1135 891 1028 1036 1367 1071 zinc finger FYVE domain protein (AHRD V3.3 *** AT2G25730.3) Solyc08g068030.1 20 29 8 14 20 33 31 47 48 27 22 36 19 27 31 zinc finger FYVE domain protein (AHRD V3.3 *-* AT2G25730.3) Solyc08g068040.3 64 145 62 127 166 121 136 203 221 169 72 140 80 141 95 zinc finger FYVE domain protein (AHRD V3.3 *-* AT2G25730.3) Solyc08g068050.3 227 521 481 368 738 690 625 667 472 273 444 496 474 576 230 DDT domain-containing protein (AHRD V3.3 *-* A0A1Q3BG21_CEPFO) AT5G25580 Solyc08g068060.3 453 488 346 667 401 556 567 494 297 475 561 402 495 378 321 transmembrane protein (AHRD V3.3 *** AT4G32680.1) AT4G32680 Solyc08g068070.3 97 125 156 140 172 155 170 125 160 119 208 162 101 127 205 Two-on-two hemoglobin-3 (AHRD V3.3 *** A0A2G3BSD0_CAPCH) AT4G32690 Solyc08g068075.1 9 65 62 44 29 29 39 32 20 24 52 17 27 32 57 Unknown protein Solyc08g068090.3 25 119 129 118 186 150 148 113 148 108 148 124 110 135 148 Hemoglobin 3 (AHRD V3.3 *** A0A2U1NXZ4_ARTAN) Solyc08g068100.3 3291 3063 3078 3010 5415 4535 4217 5764 3848 4551 3375 4748 2181 2323 2929 DUF632 domain-containing protein/DUF630 domain-containing protein (AHRD V3.3 *** A0A1Q3CDM4_CEPFO) AT5G25590 Solyc08g068110.1 7 13 14 19 22 18 36 42 15 5 6 6 2 6 4 Helicase and polymerase-containing protein TEBICHI (AHRD V3.3 *-* A0A2G3BS98_CAPCH) Solyc08g068120.3 13 95 45 105 182 143 171 206 98 56 51 93 21 52 15 Helicase and polymerase-containing protein TEBICHI (AHRD V3.3 *** A0A2G2W6E8_CAPBA) AT4G32700 Solyc08g068130.1 1 8 3 5 1 7 8 0 24 10 37 9 5 7 25 BURP domain-containing protein (AHRD V3.3 *-* A0A2U1NKA9_ARTAN) Solyc08g068140.4 10 26 2 9 0 1 5 2 31 4 34 7 12 4 8 BURP domain-containing protein 3 (AHRD V3.3 *-* A0A2G3BT77_CAPCH) Solyc08g068145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc08g068150.4 4312 3422 1740 2173 263 249 146 222 2092 2248 2114 1610 3326 2255 3632 BURP domain-containing protein (AHRD V3.3 *-* A0A2U1QID7_ARTAN) AT5G25610 Solyc08g068160.2 2 2 4 8 15 16 23 11 9 0 0 1 2 13 6 Flavin-containing monooxygenase (AHRD V3.3 *** D2IGV1_SOLLC) AT5G25620 Solyc08g068180.3 1847 2362 3449 2110 2770 2835 2752 2623 1762 1329 2450 2054 2920 2159 2538 Ribosomal protein L37 (AHRD V3.3 *** A0A2K3PC33_TRIPR) AT3G16080 Solyc08g068190.3 2 3 0 10 11 3 8 12 4 0 6 8 0 0 0 Aldehyde dehydrogenase (AHRD V3.3 *** A0A2U1M8J4_ARTAN) Solyc08g068200.4 607 753 927 887 833 772 738 702 689 773 793 876 715 986 789 GTP-binding protein (AHRD V3.3 *** A0A2G2YY28_CAPAN) AT5G11480 Solyc08g068210.3 3099 3264 3296 3406 3480 3447 3769 3672 3820 3568 3489 4278 3094 3389 4222 Beta-adaptin-like protein (AHRD V3.3 *** A0A2G2XPW5_CAPBA) AT5G11490 Solyc08g068220.3 429 486 558 506 485 467 517 471 425 362 453 451 608 499 601 50S ribosomal protein L27 (AHRD V3.3 *** A0A2G3BPR5_CAPCH) AT5G15220 Solyc08g068230.4 69 96 143 112 168 163 149 151 124 117 108 93 36 100 213 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2YYD7_CAPAN) AT5G25630 Solyc08g068240.3 0 0 1 1 0 2 4 0 0 0 0 0 0 0 22 Phosphate transporter PHO1-like protein (AHRD V3.3 *** A0A2K3P505_TRIPR) Solyc08g068250.4 41 40 68 66 61 99 94 100 72 64 77 84 57 91 52 Proline-rich receptor-like protein kinase PERK2 (AHRD V3.3 *** A0A2G3BTA3_CAPCH) Solyc08g068260.1 27 85 37 66 100 58 64 109 78 100 39 94 95 78 65 Proline-rich receptor-like protein kinase PERK2 (AHRD V3.3 *-* A0A2G3BTA3_CAPCH) Solyc08g068270.3 324 251 393 337 340 285 347 328 252 279 268 366 270 300 251 Rhomboid family protein (AHRD V3.3 *** A0A2K3L350_TRIPR) AT5G25752 Solyc08g068280.2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 N-acetyltransferase (AHRD V3.3 *** B6T916_MAIZE) Solyc08g068290.3 900 2078 1400 1631 1127 1319 1334 1316 1621 971 1372 962 1166 1123 894 Sulfite exporter TauE/SafE family protein (AHRD V3.3 *** A0A2U1KY14_ARTAN) AT2G25737 Solyc08g068300.3 732 664 1271 995 912 1091 842 875 955 783 1258 922 815 859 1437 Coiled-coil domain-containing protein 25 (AHRD V3.3 *** A0A1U8DSI6_CAPAN) AT5G11500 Solyc08g068310.3 1566 1822 1144 1024 1127 1033 1050 1365 1397 981 883 1372 2010 1790 1485 La protein 1 (AHRD V3.3 *** A0A1U8E2J1_CAPAN) AT4G32720 Solyc08g068320.3 152 795 879 1070 1449 1623 1839 1500 867 526 688 931 259 508 597 Myb (AHRD V3.3 *** Q948S5_TOBAC) AT4G32730 Solyc08g068330.3 1110 675 908 887 637 560 548 478 652 716 718 651 760 848 1141 Aspartate aminotransferase (AHRD V3.3 *** A0A1U8DSJ1_CAPAN) AT5G11520 Solyc08g068340.3 1207 2306 1337 1280 1812 1470 1500 2017 1463 1271 1108 1435 2327 1969 1435 Eukaryotic translation initiation factor 3 subunit L (AHRD V3.3 *** A0A2G3BSS2_CAPCH) AT5G25757 Solyc08g068350.3 284 262 496 299 214 220 248 237 175 370 233 270 280 227 208 transmembrane protein (AHRD V3.3 *** AT4G32750.1) AT4G32750 Solyc08g068360.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc08g068370.3 3661 2615 2178 1983 1720 1553 1439 1837 2039 2825 2064 2033 2471 2186 2335 target of Myb protein 1-like (AHRD V3.3 *** A0A2I4DXB2_9ROSI) AT4G32760 Solyc08g068380.3 127 132 146 139 113 138 91 119 138 91 100 107 133 164 125 Unknown protein Solyc08g068390.3 279 239 111 337 20 16 22 11 376 425 509 342 862 364 1272 Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a (AHRD V3.3 *** A0A2G2YXE3_CAPAN) Solyc08g068400.4 1258 1358 1451 1248 1379 1023 1164 1281 1459 1587 1045 1197 1506 1122 957 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LLS3_ARTAN) AT5G25770 Solyc08g068410.3 0 0 0 5 0 0 3 2 0 0 0 0 0 0 3 protein EMBRYONIC FLOWER 1 isoform X3 (AHRD V3.3 *-* XP_010313454.1) Solyc08g068420.3 1 12 2 2 12 2 8 12 19 8 3 9 13 5 4 L-gulonolactone oxidase (AHRD V3.3 *** A0A1U7V6W8_NICSY) AT5G11540 Solyc08g068430.4 710 550 686 629 475 567 543 414 540 372 693 373 572 598 593 Glycosyltransferases (AHRD V3.3 *** K4CM67_SOLLC) Solyc08g068440.4 0 0 0 0 1 1 0 5 1 0 0 0 0 0 0 Lipoyl synthase, mitochondrial (AHRD V3.3 *** A0A2G2Z3Q6_CAPAN) Solyc08g068450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g068460.1 170 416 687 566 793 868 721 671 483 368 506 773 399 498 335 BEST plant protein match is: (TAIR:plant.1) protein, putative (AHRD V3.3 *** G7INX9_MEDTR) AT4G28180 Solyc08g068470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat plant protein, putative (AHRD V3.3 *** G7INY3_MEDTR) Solyc08g068480.1 26 17 55 22 28 40 43 21 12 10 5 14 4 21 17 Auxin-responsive GH3 family protein (AHRD V3.3 *-* A0A2U1MRW5_ARTAN) Solyc08g068490.3 72 52 130 128 83 134 98 103 25 54 22 60 18 86 41 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1MRW5_ARTAN) Solyc08g068500.2 0 4 2 6 2 7 11 19 2 4 0 3 0 7 1 Mannose-binding lectin (AHRD V3.3 *-* A0A1R3HKP6_COCAP) Solyc08g068510.2 18 11 16 12 1 10 5 14 0 3 0 1 5 3 3 F-box protein (AHRD V3.3 *** A0A1J3E713_NOCCA) Solyc08g068520.3 9 5 21 12 18 12 19 11 13 9 4 8 19 17 1 F-box protein (AHRD V3.3 *-* A0A1J3J8H1_NOCCA) Solyc08g068530.4 129 147 129 149 130 108 120 94 119 93 81 92 164 141 137 FBD-associated F-box protein (AHRD V3.3 *-* A0A1J3I4L3_NOCCA) Solyc08g068540.4 216 129 97 67 54 71 55 58 48 83 79 49 94 91 92 B3 domain-containing protein (AHRD V3.3 *** A0A1Q3CXA6_CEPFO) AT3G18990 Solyc08g068570.4 148 234 159 166 244 224 199 271 209 186 118 285 209 181 116 Tocopherol cyclase (AHRD V3.3 *** Q6E6T1_SOLTU) AT4G32770 Solyc08g068580.4 615 564 604 630 635 726 803 718 454 483 569 711 486 528 641 phospholipase D Z-like (AHRD V3.3 *** A0A2I4G6P1_9ROSI) Solyc08g068590.4 278 317 305 317 345 309 417 311 352 254 377 319 251 260 360 Plastid lipid-associated protein/fibrillin conserved domain (AHRD V3.3 *** A0A200PLI3_9MAGN) AT2G46910 Solyc08g068600.3 122 70 81 10 6 19 6 9 61 72 446 94 106 64 248 Serine decarboxylase (AHRD V3.3 *** A0A2G2W5V8_CAPBA) Solyc08g068610.3 57 12 27 6 0 0 0 1 5 47 165 37 19 31 5 Serine decarboxylase (AHRD V3.3 *** A0A2G2W5V8_CAPBA) Solyc08g068620.3 8 0 0 0 0 0 0 0 0 0 1 0 0 0 1 Serine decarboxylase (AHRD V3.3 *** A0A2G2W5V8_CAPBA) Solyc08g068630.4 0 5 5 0 0 0 0 0 11 30 68 8 0 4 0 Serine decarboxylase (AHRD V3.3 *** A0A2G2W5V8_CAPBA) Solyc08g068640.4 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 Serine decarboxylase (AHRD V3.3 *** A0A2G2W5V8_CAPBA) Solyc08g068660.1 19 9 5 2 0 0 0 0 0 2 0 2 2 0 1 Serine decarboxylase (AHRD V3.3 *-* A0A2G2W5V8_CAPBA) Solyc08g068665.1 42 16 53 64 28 20 21 6 57 31 191 55 11 30 6 Serine decarboxylase (AHRD V3.3 *** A0A2G2W5V8_CAPBA) Solyc08g068680.4 18 0 1 1 0 0 0 0 8 20 50 10 14 17 0 aromatic amino acid decarboxylase 1A Solyc08g068690.1 464 171 125 95 1 0 0 2 49 50 183 20 166 189 449 Tyramine n-hydroxycinnamoyl transferase (AHRD V3.3 *** Q5D8C0_CAPAN) Solyc08g068700.1 946 493 264 338 143 104 111 108 230 1115 338 194 205 273 212 Tyramine n-hydroxycinnamoyl transferase (AHRD V3.3 *** Q5D8C0_CAPAN) Solyc08g068710.1 17 10 8 22 2 5 11 9 9 14 7 21 17 31 13 Tyramine n-hydroxycinnamoyl transferase (AHRD V3.3 *** Q5D8C0_CAPAN) Solyc08g068713.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3IMG1_NOCCA) Solyc08g068717.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc08g068720.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tyramine N-feruloyltransferase 10/30 (AHRD V3.3 *** A0A2G2W3Q5_CAPBA) Solyc08g068730.1 175 132 34 26 25 14 24 12 66 52 63 38 48 95 89 Tyramine n-hydroxycinnamoyl transferase (AHRD V3.3 *** Q5D8C0_CAPAN) Solyc08g068740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g068770.3 737 323 319 95 9 2 7 6 33 157 596 116 68 166 199 Tyramine n-hydroxycinnamoyl transferase (AHRD V3.3 *** Q5D8C0_CAPAN) Solyc08g068780.3 141 78 42 50 2 0 6 0 7 12 61 7 30 44 66 N-hydroxycinnamoyl-CoA:tyramine N-hydroxycinnamoyl transferase THT7-8 Solyc08g068790.3 114 67 49 12 0 1 0 0 6 16 211 11 16 61 34 Tyramine N-feruloyltransferase 10/30 (AHRD V3.3 *-* A0A2G2YXB9_CAPAN) Solyc08g068800.4 57 127 210 204 105 129 100 74 83 195 250 76 60 75 128 Glutathione peroxidase (AHRD V3.3 *-* A0A1Q3CJ37_CEPFO) Solyc08g068810.3 524 354 594 472 443 509 502 350 427 510 676 424 502 463 943 Ubiquitinyl hydrolase 1 (AHRD V3.3 *** A0A2G2W3P2_CAPBA) AT5G10790 Solyc08g068820.3 645 507 701 552 474 557 540 523 630 447 672 466 499 506 757 Zinc finger CCCH domain-containing protein 22 (AHRD V3.3 *** A0A2G2W3N0_CAPBA) AT2G24830 Solyc08g068840.3 150 158 158 139 146 164 141 135 179 72 93 108 223 190 110 Transcription factor IIIB 90 kDa subunit (AHRD V3.3 --* A0A2G2XT56_CAPBA) AT4G19550 Solyc08g068850.3 58 9 20 13 1 0 2 1 7 27 16 7 44 27 18 proton pump-interactor 1-like (AHRD V3.3 *-* A0A2I4H3B3_9ROSI) Solyc08g068860.3 37 15 2 11 0 0 0 0 54 24 23 20 75 54 29 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A072U5I5_MEDTR) Solyc08g068870.3 1503 806 427 160 6 9 3 10 144 721 271 86 2546 1003 222 Eukaryotic aspartyl protease family protein, expressed (AHRD V3.3 *** Q2R8V2_ORYSJ) Solyc08g068880.1 1240 1065 1062 923 625 693 610 628 1057 1106 1310 894 1117 831 984 protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A2I4G6J8_9ROSI) AT5G10750 Solyc08g068920.4 387 305 341 351 317 281 367 276 311 239 311 300 298 390 425 Protein kinase superfamily protein (AHRD V3.3 *** F4KIL1_ARATH) AT5G24970 Solyc08g068930.3 71 113 93 86 132 121 102 70 68 68 109 59 86 96 75 transmembrane protein (AHRD V3.3 -** AT5G10745.3) AT5G10745 Solyc08g068940.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc08g068950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g068960.3 40 89 99 74 75 119 134 95 48 48 50 34 65 92 39 Histidine kinase 5 (AHRD V3.3 *** A0A2G3DDW5_CAPCH) AT5G10720 Solyc08g068970.3 0 0 3 0 0 0 0 0 1 0 2 0 1 0 0 Major centromere autoantigen B-like protein (AHRD V3.3 *-* Q9SV19_ARATH) AT5G24890 Solyc08g068990.2 0 2 0 0 0 0 3 5 1 0 0 0 0 0 0 Pathogenesis-related protein 1 (AHRD V3.3 *** A0A2K3L121_TRIPR) AT4G31470 Solyc08g069000.4 356 395 619 528 347 445 565 381 704 632 610 601 612 599 486 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB (AHRD V3.3 *-* A0A2U1Q3X4_ARTAN) Solyc08g069010.4 74 339 268 320 619 559 667 553 345 233 268 357 193 372 314 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3DE83_CAPCH) AT5G10690 Solyc08g069020.1 14 3 2 22 1 0 0 11 8 5 12 10 15 10 12 RNA polymerase II degradation factor 1-like (AHRD V3.3 *** XP_004245429.1) Solyc08g069030.4 1514 2003 1566 1471 2053 1956 2034 2526 2415 1875 1604 1777 1740 1813 1870 aminolevulinic acid dehydratase AT1G69740 Solyc08g069040.3 4 2 40 72 1 5 1 0 8 11 21 0 8 11 37 Peroxidase (AHRD V3.3 *** K4CMC4_SOLLC) Solyc08g069050.3 381 531 593 540 591 604 596 515 462 477 576 453 598 615 493 Ubiquitin carboxyl-terminal hydrolase 19 (AHRD V3.3 *** A0A2G2XMP0_CAPBA) AT2G24640 Solyc08g069060.4 510 211 159 125 23 45 27 29 71 121 84 56 270 310 265 Hexosyltransferase (AHRD V3.3 *** A0A2G2XN19_CAPBA) Solyc08g069070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *** Q8LCP0_ARATH) Solyc08g069080.4 264 518 817 569 734 627 583 616 487 369 609 474 611 614 462 Splicing factor subunit (AHRD V3.3 *** A0A078FIH3_BRANA) AT4G14342 Solyc08g069090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MAP kinase kinase kinase 63 Solyc08g069095.1 6 17 12 4 10 7 19 10 13 10 11 14 4 10 6 Unknown protein Solyc08g069100.1 135 278 314 260 270 328 242 256 255 198 312 235 296 256 209 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1U8FG97_CAPAN) AT4G31540 Solyc08g069110.3 1 4 0 0 6 0 3 0 0 0 0 1 0 3 1 UDP-glucose 4,6-dehydratase (AHRD V3.3 *** A0A2G2YJ75_CAPAN) Solyc08g069120.4 777 540 452 412 214 260 265 249 328 341 267 385 477 441 357 Serine/arginine-rich-splicing factor RSZ22 (AHRD V3.3 *-* A0A0M8KRT8_NICAT) Solyc08g150139.1 2422 1102 1380 977 571 681 821 305 777 761 1395 820 794 1108 1556 Long chain acyl-CoA synthetase 6, peroxisomal (AHRD V3.3 *-* A0A2G2W0D7_CAPBA) Solyc08g069130.1 1 0 2 0 1 1 0 0 0 3 0 0 1 1 0 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT5G43822.1) AT5G43822 Solyc08g069140.4 174 171 430 182 214 211 236 199 249 220 425 193 232 199 194 Cyclic nucleotide-gated ion channel-like protein (AHRD V3.3 *** A0A2K3MW13_TRIPR) AT2G24610 Solyc08g069150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g069160.3 200 263 233 183 304 313 238 288 238 148 235 220 294 255 195 Homeodomain-like, Myb-like domain protein (AHRD V3.3 *-* A0A2U1PHX2_ARTAN) AT4G31270 Solyc08g069170.3 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 Receptor protein kinase, putative (AHRD V3.3 *** B9RHT1_RICCO) AT3G20190 Solyc08g069180.3 37 30 24 40 18 18 39 24 29 11 44 32 15 28 50 Protein kinase domain (AHRD V3.3 *** A0A200QZ79_9MAGN) AT2G24370 Solyc08g069200.2 6 10 18 18 17 32 37 22 13 8 22 18 4 8 3 Unknown protein Solyc08g069210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mitochondrial import inner membrane translocase subunit Tim16 (AHRD V3.3 *-* A0A2I4HS40_9ROSI) Solyc08g069220.2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 U-box domain-containing protein 12-like (AHRD V3.3 *-* A0A2I4HE50_9ROSI) Solyc08g069230.3 16 45 48 28 86 100 106 85 45 43 97 68 47 42 57 chaperone protein dnaJ-like protein (AHRD V3.3 *** AT2G24395.1) AT2G24395 Solyc08g069231.1 5175 1745 1502 1230 804 1035 1018 890 1641 1752 1811 1263 1197 1575 2050 L-arabinokinase (AHRD V3.3 *** A0A2G3AGT3_CAPAN) AT4G16130 Solyc08g069232.1 97 101 99 110 113 112 126 132 112 92 117 86 129 123 127 AIG2-like protein (AHRD V3.3 *** A0A2I4GNX8_9ROSI) AT2G24390 Solyc08g069233.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1P9Q5_ARTAN) Solyc08g069234.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g069235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g069236.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g069237.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g069238.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g069239.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g069240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g074230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1P9N7_ARTAN) Solyc08g074240.3 3609 6877 6014 4583 6959 6858 6600 7369 4360 3758 4769 5173 7356 6179 4826 40S ribosomal protein S6 (AHRD V3.3 *** Q2VCJ5_SOLTU) AT5G10360 Solyc08g074250.3 1 0 0 0 0 1 0 0 2 2 0 4 0 1 2 Disease resistance protein (AHRD V3.3 *** A0A2U1Q201_ARTAN) Solyc08g074260.3 0 2 0 0 0 0 0 0 5 0 0 5 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc08g074270.4 255 201 188 253 463 502 465 484 354 358 258 376 108 135 255 Photolyase/cryptochrome dash (AHRD V3.3 *** A0A1Y1HMX6_KLENI) AT5G24850 Solyc08g074280.4 788 1185 1492 1445 826 843 1017 849 2822 1761 2279 2858 1405 1904 1630 Beta-lactamase domain-containing protein/ABC1 domain-containing protein/WaaY domain-containing protein (AHRD V3.3 *** A0A1Q3B6T1_CEPFO) AT5G24810 Solyc08g074290.3 2823 2732 2412 2545 1859 2056 1975 2035 3162 2983 3367 3515 3757 3427 3860 Myosin heavy chain-like protein (AHRD V3.3 *** F4JRY9_ARATH) AT4G31340 Solyc08g074310.1 1 14 11 31 37 26 18 49 19 8 14 28 3 2 0 Unknown protein Solyc08g074307.2 2 2 2 2 2 6 3 6 1 1 0 0 2 0 4 Photosystem I reaction center subunit III, chloroplastic (AHRD V3.3 *** A0A1U8FJA0_CAPAN) Solyc08g074320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding KH domain-containing protein PEPPER (AHRD V3.3 *-* A0A2G3AGG4_CAPAN) Solyc08g074330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 KH domain-containing protein (AHRD V3.3 *-* A0A2I0X0Z2_9ASPA) Solyc08g074340.3 11 2 1 1 3 5 8 2 6 5 20 0 0 2 0 autophagy-related protein 18a-like (AHRD V3.3 *** A0A2I4FUZ0_9ROSI) Solyc08g074350.3 13 16 33 46 36 30 52 37 13 7 9 10 0 15 12 Unknown protein Solyc08g074360.3 195 166 261 211 232 224 279 205 213 189 201 207 166 163 237 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (AHRD V3.3 *** A0A2U1L212_ARTAN) AT3G58130 Solyc08g074370.4 2218 2402 1785 1748 1818 2069 2030 2356 2049 1921 1430 1991 2021 2395 1749 DDB1-and CUL4-associated factor-like protein 1 (AHRD V3.3 *** A0A2G2XMQ1_CAPBA) AT4G31160 Solyc08g074390.3 1491 1007 747 958 607 678 747 585 625 643 797 471 1161 1250 1635 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A1U8GSD0_CAPAN) Solyc08g074400.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 keratin-associated protein (DUF1218) (AHRD V3.3 *** AT4G31130.1) AT4G31130 Solyc08g074410.4 1892 1482 1330 1156 1143 944 1102 1168 1090 1182 1005 1215 1556 1421 1430 Tryptophan--tRNA ligase, cytoplasmic (AHRD V3.3 *** A0A1U8GS48_CAPAN) AT3G04600 Solyc08g074420.3 1118 1091 1072 894 997 1159 1040 1020 1022 801 989 917 1179 1089 1219 Coiled-coil domain-containing protein 94 (AHRD V3.3 *** A0A2G3DDE6_CAPCH) AT1G17130 Solyc08g074440.4 2079 2171 1665 1255 1642 1812 1382 1603 2463 1319 1709 1786 1911 2001 1779 Pre-mRNA-splicing factor (AHRD V3.3 *-* B3H6J5_ARATH) AT3G49601 Solyc08g074450.3 189 224 255 263 373 370 444 344 279 187 388 224 112 219 326 DUF1997 family protein, putative (DUF1997) (AHRD V3.3 *** B3H5W4_ARATH) AT4G31115 Solyc08g074460.3 0 3 14 0 0 1 0 0 1 0 0 0 0 0 0 importin-5-like (AHRD V3.3 *** A0A2I4FSB4_9ROSI) Solyc08g074480.1 607 2614 1396 3438 1891 1764 2196 1676 1472 2917 1411 1941 2106 1539 988 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) AT2G45180 Solyc08g074490.4 140 61 103 61 70 29 41 49 69 149 139 67 97 77 76 Nucleotide-diphospho-sugar transferase, nucleotide-diphospho-sugar transferase (AHRD V3.3 *** A0A2U1NHY0_ARTAN) Solyc08g074500.2 951 910 744 1011 804 895 1040 877 871 801 752 713 813 1048 1057 SNF2-related (AHRD V3.3 *** A0A200QKM3_9MAGN) AT3G54280 Solyc08g074510.1 12 18 13 16 43 15 29 16 35 12 19 28 18 35 15 TATA-binding protein-associated factor BTAF1 (AHRD V3.3 *** A0A2G2XML7_CAPBA) Solyc08g074520.2 112 131 93 66 145 109 124 145 171 138 40 134 63 142 74 TATA-binding protein-associated factor BTAF1 (AHRD V3.3 *** A0A2G2XMM1_CAPBA) Solyc08g074525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin-like-specific protease ESD4 (AHRD V3.3 *-* XP_015883442.1) Solyc08g074550.3 2951 2223 2406 1358 1141 1121 1076 1261 1441 2940 2104 1262 3336 1837 1247 Threonine--tRNA ligase, cytoplasmic (AHRD V3.3 *** A0A2G2XML6_CAPBA) AT5G26830 Solyc08g074560.3 738 621 409 526 485 523 608 447 559 533 505 597 560 478 682 Protein kinase superfamily protein (AHRD V3.3 *** A0A1P8B7P6_ARATH) AT4G31390 Solyc08g074570.1 2364 1732 1211 1261 1494 1304 1153 2014 1508 2089 1305 1862 1409 1314 1113 G-patch domain (AHRD V3.3 *-* A0A200RB68_9MAGN) AT1G33520 Solyc08g074590.2 911 912 769 876 871 764 865 764 673 636 738 686 1137 986 1003 Cytoplasmic tRNA 2-thiolation protein 1 (AHRD V3.3 *** A0A2I4G343_9ROSI) AT2G44270 Solyc08g074600.4 248 310 329 284 299 266 259 245 339 250 264 265 342 382 391 ATP-dependent DNA helicase (AHRD V3.3 *** A0A1U8GRF1_CAPAN) AT1G31360 Solyc08g074620.3 1198 2526 2953 3042 6812 8786 6164 8521 10007 6017 3958 8834 1031 6037 357 Polyphenol oxidase (AHRD V3.3 *** J7ES67_NICBE) Solyc08g074630.2 4595 18967 17529 22705 25192 25091 22969 30819 110260 49008 22139 81473 17795 37025 5794 Polyphenol oxidase (AHRD V3.3 *** O49912_TOBAC) Solyc08g074640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polyphenol oxidase (AHRD V3.3 *** Q41428_SOLTU) Solyc08g074650.4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Polyphenol oxidase (AHRD V3.3 *** R4JDV1_TOBAC) Solyc08g074655.1 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) Solyc08g074660.1 871 697 645 821 1100 1082 993 1204 424 958 533 1029 296 443 277 F-box/kelch-repeat protein SKIP25 (AHRD V3.3 *** A0A2G2XM52_CAPBA) AT1G31350 Solyc08g074670.3 145 169 251 185 163 184 169 135 150 114 234 166 167 222 331 Mediator of RNA polymerase II transcription subunit 28 (AHRD V3.3 *** A0A2G2XM67_CAPBA) AT3G52860 Solyc08g074680.3 1 17 24 33 127 160 100 131 79 74 95 288 0 51 12 partialpolyphenol oxidase A Solyc08g074682.1 46 140 164 127 111 87 57 115 153 357 274 135 13 55 20 Polyphenol oxidase (AHRD V3.3 *** Q41427_SOLTU) Solyc08g074683.1 455 11214 8020 8969 16122 18220 17384 22549 40479 21195 13041 42900 5770 16321 1998 Polyphenol oxidase (AHRD V3.3 *** Q41428_SOLTU) Solyc08g074690.3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 Polyphenol oxidase e, chloroplastic (AHRD V3.3 *** A0A314KT37_NICAT) Solyc08g074700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L16 (AHRD V3.3 *-* A0A290WKW7_SOLLC) Solyc08g074710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4 (AHRD V3.3 --* CLSY4_ARATH) Solyc08g150140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1M803_ARTAN) Solyc08g074720.2 0 0 0 1 0 0 0 0 0 0 10 0 0 0 0 Late embryogenesis abundant protein Lea5 (AHRD V3.3 *** A0A1J3FNN3_NOCCA) Solyc08g074730.2 59 50 37 76 80 55 48 58 52 79 57 53 81 79 67 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A2G3AGA5_CAPAN) AT4G02390 Solyc08g074740.3 188 339 280 319 484 493 389 515 413 365 222 378 398 370 220 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A2G3AGA5_CAPAN) AT4G02390 Solyc08g074750.2 828 350 568 510 505 492 528 344 359 319 740 339 302 381 787 Zinc finger, C2H2 (AHRD V3.3 *** A0A2U1KGD1_ARTAN) Solyc08g074760.3 1760 2253 2617 2809 2840 3208 3275 2835 2615 2452 2770 2262 2214 2173 2228 Receptor-like protein kinase (AHRD V3.3 *** A0A0K9Q349_ZOSMR) AT2G35620 Solyc08g074770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g074780.3 472 360 314 305 390 393 480 390 376 308 391 316 437 353 361 SH3 domain-containing protein (AHRD V3.3 *** A0A2U1NRE5_ARTAN) Solyc08g074790.3 697 1549 1035 893 1247 1398 1247 1260 1076 883 886 1006 1578 1268 874 Eukaryotic translation initiation factor 3 subunit G (AHRD V3.3 *** A0A1U8GXM8_CAPAN) AT3G11400 Solyc08g074795.1 0 0 12 0 0 1 5 1 3 0 0 0 2 2 7 F-box/FBD/LRR-repeat protein isoform X2 (AHRD V3.3 *-* XP_025888141.1) Solyc08g074800.3 488 303 232 274 238 233 229 195 229 260 195 276 299 333 416 F-box/FBD/LRR-repeat protein isoform X2 (AHRD V3.3 *-* XP_025888141.1) Solyc08g074830.4 1202 774 668 850 725 753 670 632 522 952 679 800 699 807 825 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *** A0A1Q3BUG5_CEPFO) Solyc08g074835.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/FBD/LRR-repeat protein At1g13570-like (AHRD V3.3 *-* XP_010324854.1) Solyc08g074840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic translation initiation factor 3 subunit G (AHRD V3.3 *-* A0A1U8GXM8_CAPAN) Solyc08g074850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TGACG-sequence-specific DNA-binding protein TGA-1B (AHRD V3.3 *-* A0A1J3IAH9_NOCCA) Solyc08g074860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Eukaryotic translation initiation factor 3 subunit G (AHRD V3.3 *-* A0A1U8GXM8_CAPAN) Solyc08g150141.1 0 1 0 3 1 0 0 0 4 0 17 0 0 1 0 Unknown protein Solyc08g074870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** Q1PE81_ARATH) AT4G10220 Solyc08g074880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box family protein (AHRD V3.3 *** S8CP16_9LAMI) Solyc08g074890.4 241 161 132 187 72 103 94 69 140 101 116 127 175 205 259 Unknown protein Solyc08g074895.1 545 229 218 339 153 151 213 92 214 313 185 233 193 205 164 F-box/FBD/LRR-repeat protein isoform X2 (AHRD V3.3 *-* XP_025888141.1) Solyc08g074910.3 58 38 45 48 42 27 41 9 55 32 72 71 18 60 22 F-box/FBD/LRR-repeat protein isoform X2 (AHRD V3.3 *-* XP_025888141.1) Solyc08g074913.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 aspartic proteinase CDR1-like (AHRD V3.3 *-* A0A1U8FNM2_CAPAN) Solyc08g074917.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein, putative (AHRD V3.3 *-* A0A061EZ29_THECC) AT2G28220 Solyc08g074950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin acetylesterase (AHRD V3.3 *** K4CML3_SOLLC) Solyc08g074955.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3LHU3_TRIPR) Solyc08g074960.3 48 40 4 31 3 8 4 7 19 18 8 14 22 15 32 Major facilitator superfamily protein (AHRD V3.3 *** F4KD53_ARATH) AT5G45275 Solyc08g074970.1 18 9 11 65 2 1 0 0 5 4 21 0 5 19 6 UDP-Glycosyltransferase superfamily protein (AHRD V3.3 *** A0A2U1Q6T8_ARTAN) AT4G19460 Solyc08g074980.4 1 4 0 0 0 0 0 0 0 2 0 0 0 1 0 Receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A1U8FDP5_CAPAN) AT1G61590 Solyc08g074990.3 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 Pectin acetylesterase (AHRD V3.3 *** K4CML7_SOLLC) Solyc08g075010.4 202 212 187 270 174 185 220 145 160 145 199 187 186 253 260 DNAse I-like superfamily protein (AHRD V3.3 *** A0A2U1N4L5_ARTAN) AT1G31500 Solyc08g075020.3 313 332 326 486 292 293 297 214 371 505 432 190 620 237 378 Pectin acetylesterase (AHRD V3.3 *** K4CMM0_SOLLC) AT4G19420 Solyc08g075030.3 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 Pectin acetylesterase (AHRD V3.3 *** K4CMM1_SOLLC) Solyc08g075040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g075043.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin acetylesterase (AHRD V3.3 *-* K3XHW7_SETIT) Solyc08g075047.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g075050.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin acetylesterase (AHRD V3.3 *** K4CMM3_SOLLC) Solyc08g075060.4 0 2 13 1 7 10 6 2 0 1 11 2 2 0 1 Pectin acetylesterase (AHRD V3.3 *** K4CMM4_SOLLC) Solyc08g075070.3 131 166 185 188 199 209 232 139 161 108 87 182 170 228 120 Profilin family protein (AHRD V3.3 *** AT4G19400.1) AT4G19400 Solyc08g075080.3 84 507 598 821 1279 1449 1260 1240 710 350 544 899 352 648 430 RING/U-box superfamily protein (AHRD V3.3 *** F4KD57_ARATH) AT5G45290 Solyc08g075090.4 3191 5872 5451 3719 4286 3608 3996 4300 3281 3061 3583 3648 7183 5673 4949 bHLH transcription factor144 Solyc08g075100.4 411 310 348 388 514 396 406 475 371 458 190 460 286 263 333 Initiation factor 4F subunit (DUF1350) (AHRD V3.3 *** Q9M236_ARATH) AT3G43540 Solyc08g075110.3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor145 AT2G34820 Solyc08g075120.3 229 484 509 556 673 715 761 745 546 406 531 635 411 492 421 Rop guanine nucleotide exchange factor 14 (AHRD V3.3 *** A0A2G3AG82_CAPAN) AT1G31650 Solyc08g075125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc08g075140.1 0 1 6 2 34 10 17 3 2 3 0 0 2 0 3 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *** A0A2I4DNF9_9ROSI) Solyc08g075150.3 2963 531 1221 369 380 497 499 302 228 550 713 623 154 599 2049 coiled-coil protein (AHRD V3.3 *** AT5G45310.2) AT5G45310 Solyc08g075160.3 1239 1823 1049 965 939 913 921 1101 1094 947 779 1062 1989 1608 1278 Bifunctional purine biosynthesis protein PurH (AHRD V3.3 *** A0A1J3JAU9_NOCCA) AT2G35040 Solyc08g150142.1 1 0 6 0 1 3 0 1 1 7 0 0 3 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200RBR9_9MAGN) Solyc08g075180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc08g075190.1 38 47 45 48 89 76 95 77 40 51 21 90 16 34 17 Unknown protein Solyc08g075210.2 57 423 36 204 115 108 75 121 855 721 363 1299 214 246 74 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc08g075230.1 64 61 84 29 40 19 21 23 51 47 55 28 100 64 37 Late embryogenesis abundant protein (AHRD V3.3 *** Q9FH78_ARATH) AT5G45320 Solyc08g075235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc08g075240.3 234 612 650 742 525 666 551 580 741 435 637 746 360 557 322 Long-chain-alcohol oxidase (AHRD V3.3 *** A0A2G3C0E1_CAPCH) AT4G19380 Solyc08g075250.1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 Long-chain-alcohol oxidase (AHRD V3.3 *-* A0A2G3C0E1_CAPCH) Solyc08g075260.1 0 0 0 0 0 0 0 0 3 1 0 1 0 0 0 Long-chain-alcohol oxidase (AHRD V3.3 *-* A0A2G3AG36_CAPAN) Solyc08g075270.1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 Long-chain-alcohol oxidase (AHRD V3.3 *-* A0A2G3C0E1_CAPCH) Solyc08g075280.4 2183 822 588 1066 374 392 433 301 608 1130 623 876 871 862 1628 AT4g19390/T5K18_170 (AHRD V3.3 *-* Q94JM4_ARATH) AT4G19390 Solyc08g075290.2 7 5 14 13 3 0 2 0 3 5 10 0 12 5 0 chitin synthase%2C putative (DUF1218) (AHRD V3.3 *** AT1G31720.2) AT1G31720 Solyc08g075300.4 173 240 151 228 233 272 227 272 191 139 121 228 269 271 191 Protein decapping 5 (AHRD V3.3 *-* A0A2G3B6L4_CAPCH) Solyc08g075310.4 1684 2402 2261 2130 2534 2573 2640 2665 2881 2218 2267 2419 2398 2336 2268 AP-4 complex subunit epsilon (AHRD V3.3 *** A0A2G3C072_CAPCH) AT1G31730 Solyc08g075320.4 6 1 32 4 0 2 2 1 4 1 7 8 0 11 0 Cytochrome P450 (AHRD V3.3 *** A0A200R6R4_9MAGN) AT5G45340 Solyc08g075330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pto-interacting protein 1-like (AHRD V3.3 *** A0A2I4EPU2_9ROSI) Solyc08g075340.3 985 1359 1261 1274 1403 1333 1266 1407 1346 1306 1036 1208 1650 1431 1155 Nucleotide-diphospho-sugar transferase (AHRD V3.3 *** A0A2U1PWR4_ARTAN) AT2G35610 Solyc08g075350.3 50 78 85 62 48 64 62 67 50 38 42 60 83 67 65 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1QLL0_ARTAN) AT4G19220 Solyc08g150143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g150144.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc08g075360.3 135 82 151 95 60 44 40 57 42 57 75 63 77 118 85 ABC transporter E family member 2 (AHRD V3.3 *** A0A1J3F317_NOCCA) AT4G19210 Solyc08g075370.3 2503 1687 5321 2782 1469 1153 1054 1271 2491 4417 3778 2325 2403 2820 3949 Unknown protein Solyc08g075380.3 958 726 871 733 552 745 699 741 863 694 830 788 691 704 913 F-box protein SKIP31 (AHRD V3.3 *** A0A2G3DD90_CAPCH) AT5G45360 Solyc08g075390.4 1485 1948 2065 2416 2507 2711 2731 2414 1994 1781 1939 2041 2057 2253 1868 Nudix hydrolase 3 (AHRD V3.3 *** A0A2G2XM34_CAPBA) AT1G79690 Solyc08g075400.3 1063 1250 1867 1414 1452 1628 1589 1054 845 810 1426 1085 1539 1398 1504 SWIb domain-containing protein (AHRD V3.3 *** Q6V9I4_SOLCH) AT2G35605 Solyc08g075410.3 375 508 600 499 488 547 510 451 507 287 406 488 672 542 478 Ribosomal protein L2 (AHRD V3.3 *** A0A2U1LJJ2_ARTAN) AT2G44065 Solyc08g075420.4 5108 1806 1815 1320 1151 1283 1231 1156 1862 1971 2430 1519 1279 1814 2783 zinc knuckle (CCHC-type) family protein (AHRD V3.3 *-* AT4G19190.1) AT4G19190 Solyc08g075430.3 927 1320 1245 2429 1167 937 864 731 1195 1075 758 393 2231 1468 2055 ABC transporter G family member 14 (AHRD V3.3 *** A0A2G3AG23_CAPAN) AT1G31770 Solyc08g075440.4 603 968 829 848 1160 983 1011 1176 1239 922 787 920 994 924 871 conserved oligomeric Golgi complex subunit 6 (AHRD V3.3 *** A0A2I4E5B9_9ROSI) AT1G31780 Solyc08g075450.3 293 328 236 271 285 337 288 251 216 309 187 215 254 276 168 WAT1-related protein (AHRD V3.3 *** K4CMR2_SOLLC) AT4G19185 Solyc08g075460.3 202 324 195 356 201 378 290 234 242 211 204 241 358 337 337 WAT1-related protein (AHRD V3.3 *** K4CMR3_SOLLC) AT4G19185 Solyc08g075470.3 324 266 322 265 284 373 361 247 268 372 241 279 380 252 178 WAT1-related protein (AHRD V3.3 *** K4CMR4_SOLLC) AT4G19185 Solyc08g075480.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9-cis-epoxycarotenoid dioxygenase (AHRD V3.3 *** A0A193PR95_9LILI) AT4G19170 Solyc08g075490.4 2955 2228 599 1627 1067 843 895 943 1868 2959 1350 1811 1268 649 569 9-cis-epoxycarotenoid dioxygenase (AHRD V3.3 *** A0A193PR95_9LILI) AT4G19170 Solyc08g075500.4 61 84 83 87 29 44 53 50 56 73 57 60 43 92 64 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2K3N651_TRIPR) AT1G31790 Solyc08g075510.4 452 525 343 642 540 493 562 551 364 464 328 467 439 472 326 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q0WVR4_ARATH),Pfam:PF13621 AT3G45880 Solyc08g075520.4 1070 588 669 937 824 843 1061 719 733 809 1079 764 559 704 1179 transglutaminase family protein (AHRD V3.3 *** AT4G19160.2) AT4G19160 Solyc08g075530.3 1487 1132 1234 1277 1097 1365 1408 1361 1638 1173 1424 1275 961 1349 2125 Alpha glucosidase-like protein (AHRD V3.3 *** Q93Y12_ARATH) AT3G23640 Solyc08g075540.5.1 1610 695 427 319 19 24 26 5 233 1350 504 136 1052 461 430 alternative oxidase AT3G22370 Solyc08g075550.4 20 27 4 11 0 0 0 2 14 15 14 3 86 22 10 alternative oxidase 1b Solyc08g075560.1 19 26 10 11 49 26 23 18 39 24 42 9 21 63 18 Unknown protein Solyc08g075570.4 33 19 10 29 14 3 7 9 49 44 34 39 56 20 22 Urea-proton symporter DUR3 (AHRD V3.3 *** A0A2G3AG00_CAPAN) AT5G45380 Solyc08g075580.3 235 135 169 151 127 141 140 110 156 175 165 131 127 122 221 DNA-directed RNA polymerase III subunit RPC6 (AHRD V3.3 *** A0A2I4FJS8_9ROSI) AT5G23710 Solyc08g075590.2 10 2 2 17 8 10 7 10 16 6 14 0 11 3 12 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc08g075593.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q6W2_ACTCH) Solyc08g075597.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 leucine-rich repeat receptor protein kinase EMS1-like (AHRD V3.3 *-* A0A1U8ESV6_CAPAN) Solyc08g075620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine protein kinase (AHRD V3.3 *-* A0A2G9GIK3_9LAMI) Solyc08g075630.3 0 3 0 2 3 3 5 0 0 1 0 1 0 1 0 Disease resistance protein RGA2 (AHRD V3.3 *** A0A1U8GK21_CAPAN) Solyc08g075640.4 34 61 77 68 90 114 99 93 92 39 81 60 105 113 85 Disease resistance protein RGA2 (AHRD V3.3 *** A0A1U8GK21_CAPAN) Solyc08g075650.3 875 1223 925 1726 1570 1297 1779 1650 1039 1810 1003 1395 965 1317 929 Formin-like protein (AHRD V3.3 *** A0A2G3AG05_CAPAN) Solyc08g075670.2 601 891 419 781 921 786 725 1423 693 1188 399 1093 450 609 316 Formin-like protein (AHRD V3.3 *-* A0A2U1Q250_ARTAN) Solyc08g075680.4 286 519 607 497 997 1007 782 887 668 373 587 719 445 525 507 Ribonuclease P protein subunit P38-like protein (AHRD V3.3 *-* AT5G53020.9) AT3G45900 Solyc08g075690.3 1682 3744 5584 5046 5265 4919 5486 4526 3914 2857 5432 3482 4023 3910 5702 Acyl-CoA-binding protein (AHRD V3.3 *** A0A2G2XLT1_CAPBA) AT1G31812 Solyc08g075700.3 9407 15500 14348 10776 15303 12169 12639 14229 9648 8753 11039 11164 17584 14653 12423 60S ribosomal protein L13 (AHRD V3.3 *** A0A1U8GMG9_CAPAN) AT3G49010 Solyc08g075710.3 573 650 989 1031 682 958 1145 606 858 766 961 711 794 904 1289 Polyamine transporter PUT1 (AHRD V3.3 *** A0A2G2XLV8_CAPBA) AT1G31830 Solyc08g075720.3 352 618 378 383 533 491 427 521 412 367 471 443 693 598 564 30S ribosomal protein s11-like (AHRD V3.3 *-* A0A2K3P6B4_TRIPR) AT1G31817 Solyc08g075730.3 1169 1038 997 877 772 809 655 869 1027 1078 810 883 1272 1198 1048 Fe-S cluster assembly protein DRE2 (AHRD V3.3 *** A0A2G2XLV2_CAPBA) AT5G18400 Solyc08g075740.1 302 222 227 253 168 182 227 158 138 137 160 132 212 243 232 Unknown protein Solyc08g075750.4 596 1186 961 1080 1173 1192 1212 1319 1182 883 843 1021 1382 1225 983 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A2G3DD48_CAPCH) AT5G45390 Solyc08g075760.3 2 20 12 17 4 1 7 5 6 2 3 8 8 15 10 Protein CYCLOPS (AHRD V3.3 *** CCLOP_MEDTR) Solyc08g075770.3 729 416 292 393 313 294 328 325 347 415 322 362 572 418 499 exopolysaccharide production negative regulator (AHRD V3.3 *** AT4G19140.1) AT4G19140 Solyc08g075780.4 325 587 806 676 672 775 632 754 1104 798 1224 929 823 742 733 Ubiquitin-fold modifier 1 (AHRD V3.3 *** A0A2G3B4L7_CAPCH) AT1G77710 Solyc08g075790.4 30 14 32 36 93 57 35 35 58 28 49 19 41 20 32 Vacuolar protein sorting-associated protein 62 (AHRD V3.3 *** A0A200RA51_9MAGN) AT2G44230 Solyc08g075800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNJ1_9MAGN) AT1G20560 Solyc08g075810.3 279 239 261 301 187 215 178 167 238 235 275 235 314 265 317 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200QNF3_9MAGN) AT1G20560 Solyc08g075820.4 86 35 27 35 16 29 26 19 45 22 55 34 29 78 59 RNA-dependent RNA polymerase6b AT3G49500 Solyc08g075830.4 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4CMV0_SOLLC) Solyc08g075840.3 4358 2069 1433 1391 1331 1359 1457 1650 1925 2191 1395 1964 1437 1826 1195 Replication protein A subunit (AHRD V3.3 *** A0A2G3DCZ2_CAPCH) AT5G45400 Solyc08g075850.3 853 1316 1376 958 953 1139 1004 977 1012 672 984 880 1592 1421 1390 50S ribosomal protein L24 (AHRD V3.3 *** A0A2G3DCX3_CAPCH) AT5G23535 Solyc08g075860.3 3010 2928 2421 2783 2779 2582 2608 2722 2675 3255 2873 2519 3097 2438 3428 zinc finger B-box protein (AHRD V3.3 *** AT5G45410.5) AT5G45410 Solyc08g075870.3 320 391 1024 694 291 395 395 272 661 474 1163 372 524 413 507 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1NU97_ARTAN) AT4G19120 Solyc08g075880.4 15 67 112 86 48 34 48 38 32 91 84 42 82 58 228 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6PHP1_ACTCH) AT2G18196 Solyc08g075890.3 4828 3414 2827 3500 2573 2860 3155 2428 3457 3242 3240 2808 3021 3038 3934 Serine/threonine-protein kinase MAK (AHRD V3.3 *-* A0A2G2XMD0_CAPBA) AT4G19110 Solyc08g075900.1 0 0 5 0 1 0 2 0 1 4 0 0 3 0 0 B3 domain protein (AHRD V3.3 *-* A0A2H1ZEG8_ARATH) AT2G33720 Solyc08g075910.1 1078 969 1460 1557 1619 1762 1624 1448 990 1271 1678 1328 1049 1127 1575 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8AQV3_ARATH) Solyc08g075920.4 88 97 181 121 101 170 110 77 66 94 93 125 69 148 57 Protein BREVIS RADIX (AHRD V3.3 *** A0A1U8GKL1_CAPAN) AT1G31880 Solyc08g075930.4 40 94 58 74 86 105 111 78 46 40 45 57 78 45 55 Kinesin-like protein (AHRD V3.3 *-* B6U4W1_MAIZE) Solyc08g075940.4 95 136 209 249 300 276 195 296 136 150 105 192 103 174 218 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** A0A2G2XMC1_CAPBA) AT3G23780 Solyc08g075950.3 6580 2556 2817 2051 1924 1940 1676 1926 1761 3433 2628 2720 1955 2266 1591 Growth-regulating factor 5 (AHRD V3.3 *** A0A2G2XMC2_CAPBA) Solyc08g075960.3 2240 713 785 799 595 466 383 523 574 1015 777 511 545 585 997 MOB kinase activator family (AHRD V3.3 *** A0A2U1N847_ARTAN) AT5G45550 Solyc08g075970.3 321 243 419 293 94 162 132 146 234 254 422 277 372 316 328 Plant viral-response family protein (AHRD V3.3 *** Q7X6G3_SOLBU) Solyc08g075980.2 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 Disease resistance protein RGA2 (AHRD V3.3 *-* RGA2_SOLBU) AT5G45440 Solyc08g075990.3 126 122 154 217 130 184 200 148 105 80 172 92 93 101 186 protein LOW PSII ACCUMULATION 3, chloroplastic (AHRD V3.3 *** A0A2I4H7S7_9ROSI) AT5G48790 Solyc08g076000.4 337 236 285 239 205 278 228 211 221 263 282 167 232 190 232 Disease resistance protein RGA2 (AHRD V3.3 *** A0A2G2XMC9_CAPBA) Solyc08g076010.4 15 23 148 38 93 114 103 78 35 53 103 68 38 69 80 Myb family transcription factor APL (AHRD V3.3 *** A0A2G3AFT2_CAPAN) AT5G45580 Solyc08g076020.4 4360 1527 1595 1272 914 986 1013 865 1167 1512 1644 1399 1448 1609 2233 Cobalamin biosynthesis protein CobW (AHRD V3.3 *-* A0A2T6DKX1_9BACT) Solyc08g076030.3 2029 3333 3118 3053 4176 4140 4477 4759 3517 3154 2252 3313 3327 3477 2402 TOPLESS 2 Solyc08g076040.2 0 0 0 0 0 0 5 0 3 4 2 0 3 3 0 Major facilitator superfamily domain-containing protein (AHRD V3.3 *** A0A2U1LUG1_ARTAN) Solyc08g076050.4 23 11 1 12 1 0 0 2 0 0 2 0 18 13 39 Receptor-like kinase (AHRD V3.3 *** P93068_BRAOL) Solyc08g076060.3 159 128 112 149 37 28 22 17 91 101 156 20 121 120 375 Lectin protein kinase family protein (AHRD V3.3 *** A0A1I9LPL5_ARATH) Solyc08g076070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lectin protein kinase family protein (AHRD V3.3 *-* A0A1P8AN35_ARATH) Solyc08g076080.3 29 15 39 54 6 3 9 1 7 14 24 2 15 9 18 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G3DCR6_CAPCH) Solyc08g076090.3 270 266 247 237 264 223 225 331 351 184 239 292 244 306 258 DUF760 domain-containing protein (AHRD V3.3 *** A0A1Q3CP94_CEPFO) AT1G32160 Solyc08g076100.4 2446 2092 1847 1420 1724 1720 1726 1850 1649 1962 1729 1729 2354 2003 1548 GBF9G-box binding AT2G35530 Solyc08g076120.3 290 339 291 361 378 344 356 295 315 230 278 271 448 318 342 MIP18 family protein (AHRD V3.3 *** A0A2U1PDT8_ARTAN) AT1G68310 Solyc08g076110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g076130.3 151 222 308 206 267 307 294 315 282 201 204 185 237 276 268 E2F/DP family winged-helix DNA-binding domain-containing protein (AHRD V3.3 *** AT4G19003.6) AT4G19003 Solyc08g076140.3 529 394 429 431 288 316 289 309 418 437 321 322 504 517 466 Phosphomevalonate kinase (AHRD V3.3 *** A0A2L0V4K1_9APIA) AT1G31910 Solyc08g076150.4 239 328 93 204 722 717 753 650 377 318 213 241 190 125 130 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8GS04_CAPAN) AT1G31920 Solyc08g076160.3 1037 1057 1063 934 1431 1758 1692 1599 1385 894 1134 1371 890 1301 1128 Extra-large guanine nucleotide-binding protein 3 (AHRD V3.3 *** A0A2G2XLW5_CAPBA) AT1G31930 Solyc08g076170.1 121 58 89 163 12 32 22 25 44 29 75 42 30 88 298 Unknown protein Solyc08g076180.3 297 252 264 384 283 241 279 211 273 275 312 190 250 240 218 cystic fibrosis transmembrane conductance regulator (AHRD V3.3 *** AT2G35585.1) AT1G31940 Solyc08g076190.3 53 233 348 354 487 424 507 441 255 198 184 357 190 382 207 protein dimerization (AHRD V3.3 *-* AT5G45610.1) AT5G45610 Solyc08g076200.4 6289 4749 6548 4533 3024 3796 3221 2966 3077 2989 5106 3347 5774 5767 6598 RNA helicase DEAD27 AT1G31970 Solyc08g076210.3 193 663 489 489 631 469 576 678 483 442 317 427 538 513 353 Secretory carrier-associated membrane protein (AHRD V3.3 *** B7X6S6_TOBAC) AT1G32050 Solyc08g076220.3 1845 4193 3661 3904 3080 3505 3539 2557 3623 3122 3333 2980 3061 1986 3969 Phosphoribulokinase (AHRD V3.3 *** A0A1U8GUA7_CAPAN) AT1G32060 Solyc08g076230.1 527 261 406 275 278 206 200 164 286 366 297 308 295 307 376 GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN90_SOLLC) Solyc08g076235.1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 5-epiaristolochene 1,3-dihydroxylase (AHRD V3.3 *** A0A2G2XLX0_CAPBA) Solyc08g076250.3 0 5 23 27 32 22 35 23 8 4 2 7 10 16 6 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc08g076290.3 497 1058 765 1250 1135 1321 1232 1139 1089 1007 572 865 801 562 931 Plastidal glycolate/glycerate translocator 1, chloroplastic (AHRD V3.3 *** A0A2G2XLX5_CAPBA) AT1G32080 Solyc08g076300.3 133 211 214 187 158 170 155 126 204 118 218 167 196 220 185 4-coumarate--CoA ligase-like 3 (AHRD V3.3 *** A0A2G3DBM9_CAPCH) AT4G19010 Solyc08g076310.3 1381 1536 1629 1808 1859 1667 1772 1523 1370 1282 1575 1372 1730 1689 2134 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *** A0A2U1KPJ9_ARTAN) AT1G32090 Solyc08g076320.3 1228 2246 2041 2223 2757 2793 2896 3372 2441 1892 1768 2146 1912 2135 1802 Cellulose synthase (AHRD V3.3 *** A0A2U1KRA4_ARTAN) Solyc08g076340.3 824 1741 2439 1686 1855 2200 2117 1684 1485 788 1764 1173 2753 2154 2677 40S ribosomal protein S30 (AHRD V3.3 *** F2EKP2_HORVV) AT5G56670 Solyc08g076350.3 359 419 538 472 791 771 815 843 436 410 395 619 273 405 240 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9FVR4_ARATH) AT1G32190 Solyc08g076360.4 407 753 755 658 1149 906 897 1101 998 604 649 891 698 822 584 gamma-tocopherol methyltransferase AT1G64970 Solyc08g076370.3 1702 1673 1627 2284 1897 1879 1765 1768 1597 1342 1912 1921 791 1422 936 Homeobox-leucine zipper protein ROC3 (AHRD V3.3 *** A0A2G3DCR4_CAPCH) AT5G46880 Solyc08g076380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 AP2-like ethylene-responsive transcription factor BBM2 (AHRD V3.3 *** A0A2G3DCR2_CAPCH) Solyc08g076390.3 453 530 1297 917 1068 1312 1182 839 738 729 1219 829 354 648 654 Transcription factor jumonji (Jmj) family protein / zinc finger (C5HC2 type) family protein (AHRD V3.3 *** F4KIX0_ARATH) AT5G46910 Solyc08g076400.3 414 666 404 969 1823 1818 1523 1510 893 631 623 858 787 644 405 Homeodomain-like superfamily protein (AHRD V3.3 *-* A0A2U1QD82_ARTAN) Solyc08g076410.4 195 415 529 550 658 711 695 655 532 333 570 452 554 520 424 Shikimate kinase-like protein (AHRD V3.3 *** S8CW00_9LAMI) AT2G35500 Solyc08g076420.3 6355 5026 5610 5539 4494 4737 4937 4335 4991 5345 5011 4088 5000 4841 5261 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A2U1QD66_ARTAN) Solyc08g076430.3 279 399 588 305 402 472 502 396 323 219 400 373 529 472 436 Survival motor neuron protein (AHRD V3.3 *** A0A2K3KY11_TRIPR) Solyc08g076440.4 853 865 655 627 622 648 739 632 603 588 667 620 893 832 760 Programmed cell death protein 2 (AHRD V3.3 *** B6TEZ7_MAIZE) AT4G02220 Solyc08g076450.3 546 475 453 447 439 443 441 467 466 508 318 483 427 439 623 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A1Y1IPQ3_KLENI) AT1G32220 Solyc08g076460.3 659 1467 1934 1437 1744 1798 1711 1412 1118 1471 1291 1125 2449 2013 1478 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (AHRD V3.3 *** A0A2G3DCR1_CAPCH) AT1G32210 Solyc08g076470.4 685 871 910 864 1017 1110 1099 1129 849 1018 750 889 671 805 907 glycerol-3-phosphate acyltransferase AT1G32200 Solyc08g076480.3 2653 2264 1909 2105 2381 1979 1744 2548 2481 3205 2166 3313 1509 1818 1973 Plastid lipid-associated protein chloroplastic-like (AHRD V3.3 *** A0A2K3PR63_TRIPR) AT2G35490 Solyc08g076490.2 0 0 8 7 0 0 1 1 0 1 0 0 2 0 1 MAP kinase kinase kinase 64 Solyc08g076510.3 589 617 811 626 632 680 608 563 607 607 784 671 733 710 810 Envelope glycoprotein (AHRD V3.3 *** Q8VZ11_ARATH) AT1G32260 Solyc08g076520.3 231 341 683 483 463 565 576 368 398 372 674 348 277 232 366 ribosome maturation factor (AHRD V3.3 *** AT2G35470.1) AT2G35470 Solyc08g076530.3 210 516 542 585 683 564 688 544 602 494 577 544 563 511 524 binding partner of ACD11 1-like (AHRD V3.3 *** A0A1U8FBL9_CAPAN) AT4G17720 Solyc08g076540.3 3192 2187 1900 1822 1898 1811 2020 1874 1965 2198 1973 1909 1562 1875 2496 Syntaxin (AHRD V3.3 *** A0A2G3DCS8_CAPCH) AT5G46860 Solyc08g076550.3 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 Phosphomannomutase (AHRD V3.3 *-* A0A2G3BTT3_CAPCH) Solyc08g076560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphomannomutase (AHRD V3.3 *-* A0A2G3BTT3_CAPCH) Solyc08g076570.3 220 263 339 303 292 262 265 237 285 225 288 249 268 295 289 Phosphatidylinositol-glycan biosynthesis class X protein (AHRD V3.3 *** A0A1J3DGI3_NOCCA) AT5G46850 Solyc08g076580.3 199 274 370 332 340 328 384 279 217 179 250 227 329 341 370 valine-tRNA ligase (AHRD V3.3 *** AT1G32310.1) AT1G32310 Solyc08g076590.3 249 251 217 299 358 329 326 305 310 211 257 319 267 327 235 Heat shock factor protein HSF8 (AHRD V3.3 *** A0A2G2V6B5_CAPBA) AT1G32330 Solyc08g076610.4 166 642 695 684 965 1154 1247 860 578 377 655 946 387 683 295 Cell cycle checkpoint protein RAD1 (AHRD V3.3 *** A0A1J3GMC0_NOCCA) AT4G17760 Solyc08g076620.1 0 0 23 0 0 6 2 2 7 10 5 1 0 1 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1KXX4_ARTAN) Solyc08g076630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc08g076640.1 3 0 0 0 0 0 0 1 4 0 0 1 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1KXX4_ARTAN) Solyc08g150145.1 8 5 5 12 7 3 4 11 14 0 13 7 9 7 5 Unknown protein Solyc08g076650.3 1559 1384 1535 1557 867 889 819 1102 1801 1290 1170 1503 1578 1717 1974 Trehalose-6-phosphate synthase (AHRD V3.3 *** E5GC29_CUCME) AT4G17770 Solyc08g076660.3 2162 1461 1097 956 1002 974 848 840 1089 1074 1104 1159 1370 1338 1277 RNA-binding protein 34 (AHRD V3.3 *** A0A2I4DDF5_9ROSI) AT5G46840 Solyc08g076670.3 592 746 1053 1115 898 1035 905 873 920 1445 1301 1058 666 924 947 SNARE associated Golgi protein (AHRD V3.3 *** A0A200PXG4_9MAGN) AT4G17790 Solyc08g076680.3 477 341 446 449 356 430 542 343 395 325 517 362 276 383 657 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3DCC7_CAPCH) AT5G64320 Solyc08g076683.1 35 29 30 6 8 22 20 14 38 18 8 17 8 28 13 Unknown protein Solyc08g150146.1 337 231 154 226 265 208 246 331 169 262 188 330 148 240 140 Unknown protein Solyc08g076687.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc08g076690.3 308 196 171 197 228 185 177 243 216 237 215 159 131 132 124 Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** A0A2G2XLG7_CAPBA) AT5G16760 Solyc08g076700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 107 Solyc08g076710.3 1 0 0 1 7 0 1 2 0 0 0 0 0 0 0 R2R3MYB transcription factor 39 Solyc08g076720.4 929 734 641 922 400 548 526 465 672 553 712 557 600 593 551 ABC transporter B family member 2 (AHRD V3.3 *** A0A2G2XLV4_CAPBA) AT4G25960 Solyc08g076730.4 2469 919 739 1018 397 380 330 377 814 1147 1091 492 637 1221 3135 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* Q0WUZ1_ARATH) AT4G17940 Solyc08g076740.4 95 125 197 165 113 190 155 108 104 88 129 92 148 138 137 ER-based factor for assembly of V-ATPase (AHRD V3.3 *-* AT5G52980.1) Solyc08g076760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RVT_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3BYV9_CEPFO) Solyc08g076770.4 203 381 259 221 390 250 286 410 333 251 182 282 364 250 161 ER-based factor for assembly of V-ATPase (AHRD V3.3 *** AT5G52980.1) AT5G52980 Solyc08g076780.2 1 0 0 1 0 0 0 0 4 2 4 0 0 0 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *-* A0A2U1LGD5_ARTAN) Solyc08g076790.3 52 45 50 79 12 10 21 7 40 25 96 10 55 19 211 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1LGD5_ARTAN) AT2G23910 Solyc08g076800.4 0 0 0 1 0 0 0 0 1 1 2 0 0 7 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QDA6_ARTAN) AT4G17920 Solyc08g076810.4 149 140 97 170 200 137 152 162 177 155 117 148 155 156 146 GPI-anchored wall transfer protein (AHRD V3.3 *** A0A2K3PA77_TRIPR) AT4G17910 Solyc08g076820.3 992 2025 1719 2276 3721 3998 3538 4122 2468 2281 3265 2983 799 1113 965 bHLH transcription factor146 AT5G46690 Solyc08g076830.1 42 49 82 100 49 58 46 5 56 41 90 40 61 40 108 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LC40_ARTAN) AT5G17600 Solyc08g076840.3 284 328 519 452 324 374 387 348 560 305 421 423 366 360 390 RNA-binding protein (AHRD V3.3 *** Q40270_MESCR) AT2G35410 Solyc08g076850.3 11 71 163 58 141 69 97 85 68 22 65 58 65 44 99 Tetraspanin family protein (AHRD V3.3 *** A0A2U1MFE6_ARTAN) AT5G46700 Solyc08g076860.3 8390 2936 2323 1383 330 257 259 241 1140 3897 3425 1140 1766 2073 2999 PLATZ transcription factor family protein (AHRD V3.3 *** F4IEB6_ARATH) AT1G32700 Solyc08g076870.1 560 291 124 176 74 58 74 54 202 195 440 188 187 223 459 DUF740 domain-containing protein (AHRD V3.3 *** A0A1Q3BKH7_CEPFO) AT1G32690 Solyc08g076880.3 279 92 280 322 15 17 23 32 280 172 478 176 137 283 1310 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (AHRD V3.3 *-* A0A2G2XLC0_CAPBA) Solyc08g076883.1 0 1 2 5 0 2 1 0 3 3 9 0 0 0 0 Unknown protein Solyc08g076887.1 0 0 3 0 0 3 1 2 0 0 1 0 0 0 0 proline-rich receptor-like protein kinase PERK13 isoform X2 (AHRD V3.3 --* XP_024537326.1) Solyc08g076910.3 1289 2106 1777 1467 1770 1878 1819 1750 1383 1046 1163 1721 1544 1893 900 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *** A0A2G3AFL7_CAPAN) AT4G17895 Solyc08g076920.3 992 1657 1262 1318 1988 1612 1784 1732 1583 1351 1181 1481 1712 1507 1116 Arf GTPase activating protein (AHRD V3.3 *** A0A200PXM2_9MAGN) AT5G46750 Solyc08g076930.1 2341 2248 3002 1419 1106 1294 1059 1100 1649 2100 3370 2167 2189 1822 2338 jasmonic acid 3 AT1G32640 Solyc08g076940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant/protein (AHRD V3.3 *** Q8GX16_ARATH) AT2G35215 Solyc08g076950.3 18 7 7 5 11 9 12 3 5 10 9 4 1 1 3 Unknown protein Solyc08g076960.1 17 78 20 35 199 216 236 199 55 37 46 42 43 32 26 Abscisic acid receptor PYL1 (AHRD V3.3 *** A0A2G3DCH7_CAPCH) AT5G46790 Solyc08g076970.3 298 755 748 531 521 468 446 574 5953 3888 3823 4159 551 765 563 Acetylornithine deacetylase (AHRD V3.3 *** A0A2G2XLB1_CAPBA) Solyc08g076980.4 0 0 0 1 0 0 0 0 3 3 17 3 0 0 0 Acetylornithine deacetylase (AHRD V3.3 *** A0A2G3DCH5_CAPCH) Solyc08g076990.3 963 1015 841 779 838 750 640 925 1007 1023 652 776 1572 1142 1035 Acetylornithine deacetylase (AHRD V3.3 *** A0A2G2XLB1_CAPBA) AT4G17830 Solyc08g077000.1 24 21 14 65 27 38 28 34 10 7 16 40 7 27 0 Zinc finger protein (AHRD V3.3 *** A0A200PSW5_9MAGN) AT4G17810 Solyc08g077010.1 2 10 7 8 1 24 12 12 4 1 16 7 17 12 15 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A1U8EX97_CAPAN) AT4G17800 Solyc08g077020.1 89 67 222 65 74 72 69 68 36 26 368 69 20 25 101 Auxin responsive SAUR protein (AHRD V3.3 *** A0A2U1PXP1_ARTAN) AT2G35290 Solyc08g077030.4 1479 2420 2085 2167 2443 2219 2181 2976 1767 2154 1516 2235 2919 2660 1449 AT-hook motif nuclear-localized protein 10 (AHRD V3.3 *** A0A2G3DCF2_CAPCH) AT4G17950 Solyc08g077040.3 319 468 515 442 570 578 573 496 415 380 528 395 609 458 416 phospholipid hydroperoxide glutathione peroxidase (AHRD V3.3 *** AT4G17960.1) AT4G17960 Solyc08g077050.3 613 555 630 642 627 645 551 711 659 577 461 587 520 540 604 Ferredoxin (AHRD V3.3 *** A0A1U8GXA1_CAPAN) AT1G32550 Solyc08g077060.3 632 1477 1961 1831 3549 3086 3039 2426 1562 1068 2469 1870 669 1374 2545 Zinc finger, LSD1-type (AHRD V3.3 *** A0A2U1LIJ4_ARTAN) AT1G32540 Solyc08g077070.3 4 3 13 8 0 3 2 0 3 3 8 0 5 0 10 Unknown protein Solyc08g077080.1 4 2 0 6 16 24 10 27 3 3 1 5 1 2 0 Glycosyltransferase (AHRD V3.3 *** E5L3R9_SOLLC) Solyc08g077090.3 148 140 143 168 155 156 148 163 162 125 195 164 118 162 185 Eyes absent-like protein (AHRD V3.3 *** A0A2K3PED3_TRIPR) AT2G35320 Solyc08g077100.3 12 89 30 34 189 242 180 185 127 38 116 66 48 40 71 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QFX7_ARTAN) Solyc08g077110.4 100 99 158 53 75 89 48 38 93 79 71 39 149 148 74 NAC domain-containing protein 45 (AHRD V3.3 *** A0A2G2XLA5_CAPBA) AT5G46590 Solyc08g077120.2 340 808 557 446 412 337 348 484 596 468 416 629 722 735 392 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A2G2XLM4_CAPBA) Solyc08g077130.2 0 4 0 0 0 0 0 4 0 0 0 1 0 0 0 Unknown protein Solyc08g077140.1 267 536 604 383 283 314 325 232 376 200 391 278 625 547 557 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A2G3AFE9_CAPAN) Solyc08g077150.3 739 764 915 937 827 1047 1087 800 717 566 790 780 581 660 773 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1P5P3_ARTAN) AT2G35350 Solyc08g077170.3 177 196 52 104 153 197 170 173 213 192 101 144 227 76 8 Protein NRT1/ PTR FAMILY 7.3 (AHRD V3.3 *** A0A1U8GJT1_CAPAN) Solyc08g077180.3 172 531 107 296 569 406 347 533 397 361 105 361 661 295 253 Pyruvate kinase (AHRD V3.3 *** A0A1U8GRH5_CAPAN) AT1G32440 Solyc08g077190.1 28 10 19 32 26 41 22 14 20 21 13 20 22 24 33 Unknown protein Solyc08g077200.4 273 529 481 469 553 589 632 611 430 301 405 390 590 576 359 Ribose-phosphate pyrophosphokinase (AHRD V3.3 *** A0A0U9HNH5_KLENI) AT1G32380 Solyc08g077210.4 521 275 666 548 203 209 238 136 210 184 595 136 236 255 494 inositol-1,4,5-triphosphate-5-phosphatase 1 AT4G18010 Solyc08g077220.3 2132 1631 1854 1449 1657 1821 1721 1700 1558 1846 1809 1393 1671 1243 1423 Tobamovirus multiplication protein 2A (AHRD V3.3 *** A0A2G3DCL9_CAPCH) AT1G32400 Solyc08g077230.3 839 2364 1571 1744 5159 5228 5754 4796 2098 1439 1474 1751 2397 1882 1778 Two-component response regulator APRR2-like protein (AHRD V3.3 *** A0A2K3PF46_TRIPR) AT4G18020 Solyc08g077240.3 3266 4180 3779 3648 2941 2862 2952 3096 4145 3772 3915 2445 3937 3236 6336 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1NM08_ARTAN) AT4G18030 Solyc08g077250.4 799 694 670 770 614 637 675 669 561 577 699 653 794 674 711 Man1-Src1p-carboxy-terminal domain protein (AHRD V3.3 *** AT5G46560.1) AT5G46560 Solyc08g077260.3 257 206 470 350 373 410 388 273 236 372 433 333 307 245 283 Vacuolar protein sorting-associated protein 55-like protein (AHRD V3.3 *** A0A1U8GR21_CAPAN) AT1G32410 Solyc08g077270.4 84 170 123 211 257 120 178 271 242 177 145 168 229 207 195 Phosphoacetylglucosamine mutase (AHRD V3.3 *** A0A1U8GJ76_CAPAN) AT5G18070 Solyc08g077280.1 775 1129 1428 1109 1554 1436 1356 1243 936 856 1265 1077 1521 1414 1145 Allyl alcohol dehydrogenase-like protein (AHRD V3.3 *** Q8VZ93_ARATH) AT3G59840 Solyc08g077290.1 189 322 183 280 330 322 304 425 287 269 238 279 390 291 227 DnaJ subfamily c member 2-like protein (AHRD V3.3 *** A0A2K3NSH6_TRIPR) AT5G45420 Solyc08g077300.3 183 93 217 229 59 44 69 42 95 88 101 42 197 142 330 UMP-CMP kinase (AHRD V3.3 *** A0A2G3AFB8_CAPAN),Pfam:PF00406 Solyc08g077310.3 2760 2192 1873 1981 1568 1765 1859 1747 2145 1917 1761 1736 1926 2342 1854 Suppressor of abi3-5 (AHRD V3.3 *** A0A1I9LMI4_ARATH) AT3G54230 Solyc08g077320.3 57 60 38 28 25 34 36 48 38 16 33 36 41 99 58 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0W1U4_9ASPA) Solyc08g077330.3 81 18 55 0 0 2 2 0 11 3 4 0 0 50 12 Expansin-like B1 (AHRD V3.3 *** A0A2G3DCC1_CAPCH) Solyc08g077340.2 256 221 327 301 235 276 352 236 141 138 264 171 173 270 227 F-box/RNI-like superfamily protein (AHRD V3.3 *** A0A2H1ZEG0_ARATH) Solyc08g077350.3 222 381 373 369 378 400 426 434 399 270 428 319 414 404 426 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1KV95_ARTAN),Pfam:PF13419 AT2G38740 Solyc08g077360.3 124 268 433 255 457 391 409 398 305 293 384 401 141 219 229 Dynamin (AHRD V3.3 *** E5GB64_CUCME) Solyc08g077370.4 455 193 195 104 0 6 0 0 21 74 231 11 125 234 199 Purine permease (AHRD V3.3 *** A0A2P5BSS2_TREOI) Solyc08g077380.4 28 40 0 33 0 5 0 0 2 0 0 0 19 0 1 Purine permease (AHRD V3.3 *** A0A2P5BSS2_TREOI),Pfam:PF16913 Solyc08g077385.1 277 345 291 293 222 318 289 213 236 184 226 264 451 514 268 Intron maturase, type II family protein (AHRD V3.3 *** A0A2U1N325_ARTAN) AT5G46920 Solyc08g077400.3 6 8 0 19 8 0 4 1 1 2 0 8 1 1 0 Invertase inhibitor (AHRD V3.3 *** E5GC99_CUCME) AT5G38610 Solyc08g077410.4 13 14 9 31 15 10 12 14 15 15 23 15 18 18 35 Cytochrome c oxidase (AHRD V3.3 *** A0A200PLW7_9MAGN) AT1G32710 Solyc08g077420.3 6876 4332 3259 4295 4277 4369 4558 4632 4126 4188 3579 4008 2778 4023 3540 Regulator of nonsense transcripts 1-like protein (AHRD V3.3 *** A0A2G3AF80_CAPAN) AT5G47010 Solyc08g077430.3 1032 1033 1658 1260 1011 1200 1277 1102 1059 887 1293 1020 811 1108 1411 ephrin type-B receptor (AHRD V3.3 *** AT5G11700.2) AT5G47020 Solyc08g077440.3 4680 3179 2852 1930 1073 1140 1165 1238 2239 6624 6123 1592 4368 4162 2994 Lon protease homolog (AHRD V3.3 *** A0A2U1LET6_ARTAN) AT5G47040 Solyc08g077450.4 3561 2410 1518 1717 1291 1397 1092 1439 1817 1706 1622 1672 1924 1852 1813 electron carrier/iron ion-binding protein (AHRD V3.3 *** AT1G32730.1) AT1G32730 Solyc08g077460.3 1827 1610 1622 2904 1956 2352 2190 2122 1987 2163 2481 1429 1644 1413 1907 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** Q8LCK5_ARATH) AT1G32740 Solyc08g077470.4 571 387 298 449 384 494 397 393 318 529 454 382 425 358 433 Reticulon-like protein B22 (AHRD V3.3 *** A0A2G3DCL8_CAPCH) AT1G78895 Solyc08g077480.4 434 375 751 775 436 511 421 411 506 229 834 423 891 752 857 FCS-Like Zinc finger 2 (AHRD V3.3 *-* FLZ2_ARATH) AT5G47060 Solyc08g077490.2 45 28 140 68 43 55 51 27 66 24 120 62 49 63 281 Vacuolar protein sorting 13 (AHRD V3.3 *-* J7FHV5_MESCR) Solyc08g077500.4 862 632 1117 1057 466 513 713 464 967 560 993 667 693 1188 1471 Pleckstrin homology domain (AHRD V3.3 *** A0A200QQL4_9MAGN) AT4G17140 Solyc08g077510.4 408 537 673 830 556 552 587 504 1104 1139 761 689 951 738 1157 Poly(U)-specific endoribonuclease-B-like protein (AHRD V3.3 *** A0A2K3PLY2_TRIPR) AT4G17100 Solyc08g077520.3 1080 668 713 756 623 756 686 640 652 742 1007 702 656 685 743 Centromere protein O (AHRD V3.3 *** A0A200PRW5_9MAGN) AT5G10710 Solyc08g077530.3 699 253 352 291 196 147 173 116 269 559 836 155 142 234 573 Beta-amylase (AHRD V3.3 *** Q94EU9_SOLTU) AT4G17090 Solyc08g077540.2 80 108 120 111 112 121 93 93 73 86 117 98 144 124 156 Unknown protein Solyc08g077550.3 100 561 655 489 774 729 762 707 558 334 484 505 537 587 361 Novel plant snare, putative (AHRD V3.3 *** B9RUR4_RICCO) AT2G35190 Solyc08g077560.4 289 190 167 137 135 98 127 121 146 317 206 181 262 165 70 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1KAY9_ARTAN) AT5G47070 Solyc08g077570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) Solyc08g077580.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *-* A0A200QQJ8_9MAGN) Solyc08g077590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *-* A0A200QQJ8_9MAGN) Solyc08g077600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT3G32330 Solyc08g077610.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT1G05490 Solyc08g077620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD40 repeat (AHRD V3.3 *-* A0A200QP61_9MAGN) Solyc08g077630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1KAY9_ARTAN) AT5G47070 Solyc08g077640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) Solyc08g077650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) Solyc08g077660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNF2-related (AHRD V3.3 *-* A0A200QQJ8_9MAGN) Solyc08g077670.3 0 0 0 0 0 3 1 0 0 1 0 0 0 0 0 SNF2 domain-containing protein CLASSY 4-like (AHRD V3.3 *-* A0A2I4G110_9ROSI) AT3G32330 Solyc08g077680.3 1267 914 1152 836 733 719 711 703 1013 775 880 901 734 864 1039 KIP1-like protein (AHRD V3.3 *** A0A2U1NFC3_ARTAN) AT5G58320 Solyc08g077690.3 761 667 713 770 625 692 719 724 701 724 673 650 612 679 732 SNF2-related (AHRD V3.3 *** A0A200QQJ8_9MAGN) AT1G05490 Solyc08g077700.3 1 6 6 4 27 19 35 27 20 11 0 22 1 13 13 Eukaryotic translation initiation factor 4G (AHRD V3.3 *** A0A1J3IRB2_NOCCA) Solyc08g077710.3 1651 2877 3392 2056 2768 3301 2829 2615 1927 1342 2250 2052 3519 2964 3391 60S ribosomal protein l37a-like (AHRD V3.3 *** A0A2K3N190_TRIPR) Solyc08g077720.3 1869 2748 3645 2261 2330 2980 2592 2113 1700 1292 2796 1933 3726 3219 3865 60S ribosomal protein l37a-like (AHRD V3.3 *** A0A2K3N190_TRIPR) AT3G10950 Solyc08g077730.3 2310 1033 956 1152 1027 1065 961 1047 964 1402 1197 954 911 1039 1300 phosphatidylinositol 4-phosphate 5-kinase 4-like (AHRD V3.3 *** A0A2I4G100_9ROSI) AT4G17080 Solyc08g077740.1 86 39 28 9 10 9 8 8 15 50 53 8 78 67 21 I-7 (AHRD V3.3 *** A0A0K0VHK2_SOLPN) Solyc08g077750.4 1092 859 798 762 744 819 752 801 883 744 644 657 810 894 771 Decapping nuclease DXO-like protein, chloroplastic (AHRD V3.3 *** A0A1U8GHM1_CAPAN) AT4G17620 Solyc08g077760.3 72 70 277 152 22 30 56 25 111 80 261 48 85 80 142 Unknown protein Solyc08g077770.3 222 301 281 339 332 267 304 312 257 254 261 269 278 234 244 Calcineurin B-like protein (AHRD V3.3 *** A1XCM9_POPEU) AT4G17615 Solyc08g077780.3 1207 632 494 528 526 589 447 649 586 914 767 530 492 425 799 Protein kinase (AHRD V3.3 *** O65765_CRAPL) Solyc08g077790.3 910 602 725 581 410 494 378 370 484 710 807 468 1530 747 956 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2U1QI01_ARTAN) AT4G17070 Solyc08g077800.4 623 430 442 418 437 379 378 425 394 351 300 394 519 609 371 DNA repair endonuclease UVH1 (AHRD V3.3 *** A0A2G3AF37_CAPAN) AT5G41150 Solyc08g077810.2 6 15 8 11 77 95 60 48 34 25 2 9 66 20 15 Cationic amino acid transporter (AHRD V3.3 *-* S8DTC6_9LAMI) Solyc08g077820.4 2 26 16 19 10 29 30 29 62 22 27 13 44 32 22 Cationic amino acid transporter (AHRD V3.3 *** S8DTC6_9LAMI) Solyc08g077825.1 45 14 13 14 19 23 11 8 9 13 6 17 13 20 4 Unknown protein Solyc08g077830.1 685 407 450 409 324 453 422 322 341 427 411 402 377 415 422 Deoxyhypusine hydroxylase (AHRD V3.3 *** A0A2G3DC97_CAPCH) AT3G58180 Solyc08g077840.3 556 889 868 955 1298 1239 1224 1167 788 503 579 1097 695 812 979 (S)-ureidoglycine aminohydrolase (AHRD V3.3 *** A0A1U8GPQ3_CAPAN) AT4G17050 Solyc08g077850.2 1400 1029 591 582 430 488 556 577 471 428 333 403 789 991 549 tRNA/rRNA methyltransferase (SpoU) family protein (AHRD V3.3 *** A0A2U1NGV1_ARTAN) AT4G17610 Solyc08g077860.4 6 5 1 5 12 4 4 7 5 2 11 2 5 2 1 meiotic serine proteinase Solyc08g077870.4 0 0 0 0 0 0 1 0 0 0 6 0 0 1 2 cyclin-T1-like (AHRD V3.3 *** A0A2I4GUH5_9ROSI) Solyc08g077880.3 916 2277 1348 1897 3054 2298 2141 2714 1585 1903 884 1926 1536 1545 886 Chlorophyll A-B binding protein (AHRD V3.3 *** A0A200RAS0_9MAGN) AT5G47110 Solyc08g077890.3 2491 2683 2667 2682 2787 2721 2552 2607 2415 2752 2658 2505 3093 3044 3041 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A2G2XM13_CAPBA) AT4G17040 Solyc08g077900.3 835 70 269 61 0 0 0 0 89 68 117 12 62 157 733 Expansin-like B1 (AHRD V3.3 *** A0A1U8GH71_CAPAN) AT4G17030 Solyc08g077910.3 0 3 1 0 0 0 0 1 1 0 1 1 0 0 0 Expansin-like B1 (AHRD V3.3 *** A0A2G2VI71_CAPBA) Solyc08g077920.3 423 573 609 451 583 566 484 551 461 397 480 438 699 544 570 Isocitrate dehydrogenase [NAD] subunit, mitochondrial (AHRD V3.3 *** O65852_TOBAC) AT5G03290 Solyc08g077930.3 550 572 860 674 856 768 836 731 789 694 783 604 727 613 709 Isocitrate dehydrogenase [NAD] subunit, mitochondrial (AHRD V3.3 *** O65852_TOBAC) AT5G03290 Solyc08g077940.2 184 256 328 294 362 410 351 385 319 319 228 410 268 246 117 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 (AHRD V3.3 *** A0A2G2XLN8_CAPBA) AT2G35160 Solyc08g077950.1 232 537 510 403 759 640 653 911 538 399 348 498 300 490 312 Aquaporin-like protein (AHRD V3.3 *-* A0A2U1NPJ5_ARTAN) Solyc08g077960.3 1317 1198 1332 1859 1820 1664 1611 1348 1053 1386 1543 1129 2259 1265 1451 GATA transcription factor 26 (AHRD V3.3 *** A0A2G2XLP4_CAPBA) AT4G17570 Solyc08g077970.2 154 187 221 136 128 157 137 128 167 100 170 154 225 241 162 transcription factor IIIB (AHRD V3.3 *** AT4G17010.1) AT4G17010 Solyc08g077980.4 1058 852 730 666 793 792 665 916 884 1438 813 1068 1788 1036 585 Bax inhibitor AT5G47120 Solyc08g077990.3 75 761 794 650 1143 1106 1153 1308 800 401 636 824 353 853 295 Kinase like protein (AHRD V3.3 *-* Q0WPK0_ARATH) AT4G16970 Solyc08g078000.3 267 179 225 256 292 261 245 236 251 236 247 290 191 179 296 Vesicle-associated protein 2-1 (AHRD V3.3 *** A0A2G2XLS2_CAPBA) AT5G47180 Solyc08g078010.3 229 714 650 397 664 581 530 730 662 381 428 402 469 534 409 50S ribosomal protein L19 (AHRD V3.3 *-* B6T8M1_MAIZE) AT5G47190 Solyc08g078020.1 1799 8092 3829 13674 8596 6148 9763 12262 4823 13726 5337 4592 4594 3317 1025 Methionine rich arabinogalactan (AHRD V3.3 *-* Q52QJ6_SOLLC) Solyc08g078030.4 2 0 0 3 0 0 0 0 0 0 0 0 0 3 1 Transferase domain-containing protein (AHRD V3.3 *** A0A1Q3BID0_CEPFO) AT5G02890 Solyc08g078040.4 408 229 327 251 95 147 132 92 192 237 468 115 239 418 1147 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A2U1Q205_ARTAN) Solyc08g078060.3 521 393 947 258 122 123 118 104 212 249 1682 206 486 287 600 Transmembrane protein (AHRD V3.3 *** Q1PDG7_ARATH) Solyc08g078070.4 816 648 1438 658 730 637 753 632 652 638 1993 450 934 615 808 small GTP-binding protein A Solyc08g078080.2 79 172 113 127 108 122 97 84 89 50 129 114 209 163 141 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3DC53_CAPCH) AT4G16835 Solyc08g078090.1 240 482 599 482 441 350 295 470 500 427 351 577 621 278 611 Phospholipase A1-Ibeta2, chloroplastic (AHRD V3.3 *** A0A2G3AF51_CAPAN) AT4G16820 Solyc08g078095.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g078100.1 81 239 284 330 300 368 377 317 235 227 255 368 222 296 193 Polyamine transporter PUT1 (AHRD V3.3 *** A0A1U8GQH8_CAPAN) AT1G31830 Solyc08g078110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 gibberellin 20 oxidase 1-like (AHRD V3.3 *-* A0A2I4EIK1_9ROSI) Solyc08g078120.2 0 3 0 0 0 0 1 0 0 0 0 0 0 0 4 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (AHRD V3.3 *-* A0A1P8B7I1_ARATH) Solyc08g078130.4 303 173 279 277 191 259 244 208 246 200 261 231 224 233 233 Enoyl-CoA hydratase (AHRD V3.3 *** A0A1Y1IHQ1_KLENI) AT4G16800 Solyc08g078140.3 50 40 91 58 61 41 70 63 60 47 36 58 75 59 98 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** A0A2G3DC30_CAPCH) AT4G17510 Solyc08g078150.1 276 400 357 304 360 417 374 380 379 377 368 314 285 333 265 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1NFL7_ARTAN) AT1G79490 Solyc08g078160.3 89 9 46 57 10 9 8 4 31 51 75 47 2 21 47 Oleosin (AHRD V3.3 *** A0A1U8GG58_CAPAN) Solyc08g078170.1 1 7 9 0 0 10 5 7 1 3 2 3 0 3 0 Ethylene-responsive transcription factor 2 (AHRD V3.3 *** A0A2G3DC56_CAPCH) Solyc08g078180.1 0 2 0 0 2 0 0 0 0 0 30 0 2 26 13 Ethylene Response Factor A.1 Solyc08g078190.2 263 173 263 43 30 30 11 19 59 32 556 294 225 69 446 Ethylene-responsive transcription factor 5 (AHRD V3.3 *** A0A2G2XL45_CAPBA) AT5G47230 Solyc08g078200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plasma membrane ATPase (AHRD V3.3 *** A0A2G2XL61_CAPBA) Solyc08g078210.3 673 475 431 577 560 481 492 410 598 880 747 859 372 563 1174 Nudix hydrolase 8 (AHRD V3.3 *** A0A2G2XL67_CAPBA) AT5G47240 Solyc08g078220.2 1616 821 977 847 745 889 795 702 599 1045 948 698 649 656 842 PPPDE putative thiol peptidase family protein (AHRD V3.3 *** A0A2U1KMT1_ARTAN) AT5G47310 Solyc08g078230.4 1827 1052 1129 959 827 1021 997 700 827 918 956 718 1142 1273 1310 Zinc ion binding protein (AHRD V3.3 *** F4JTW1_ARATH) AT4G13970 Solyc08g078240.4 1097 851 896 1141 846 872 969 750 763 755 808 759 1271 1020 1038 Mediator of RNA polymerase II transcription subunit 32 (AHRD V3.3 *** A0A2G2XL50_CAPBA) AT1G11760 Solyc08g078250.4 826 1014 1069 864 1173 959 940 1153 1414 1219 732 1273 1874 1311 948 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1MCE4_ARTAN) AT3G60340 Solyc08g078260.1 0 0 0 0 3 1 0 0 1 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KLU2_ARTAN) Solyc08g078270.3 1035 603 445 678 414 401 394 464 484 824 453 545 502 501 625 Dual specificity phosphatase (AHRD V3.3 *** A0A200Q2H3_9MAGN) AT2G35680 Solyc08g078280.1 34 53 37 47 45 47 65 72 42 53 26 53 50 48 15 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q016_9MAGN) AT5G47360 Solyc08g078290.1 175 97 184 229 179 133 103 111 74 111 200 81 161 162 332 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* AT4G16790.1) AT4G16790 Solyc08g078300.4 462 762 934 1104 1046 1060 1011 932 1365 764 1046 1041 705 1004 1185 Homeobox-leucine zipper protein HAT4 (AHRD V3.3 *** A0A2G2XL32_CAPBA) AT4G16780 Solyc08g078310.3 469 300 190 191 145 198 167 192 176 297 255 246 358 296 309 Chromogranin (DUF1639) (AHRD V3.3 *-* O23587_ARATH) Solyc08g078320.3 2301 2365 1868 2024 1856 2101 2130 2137 1741 1685 1583 1897 2089 2204 2027 E3 ubiquitin-protein ligase HOS1 (AHRD V3.3 *** A0A2G2XL48_CAPBA) AT2G39810 Solyc08g078330.4 65 56 43 74 0 1 2 3 34 39 111 19 23 32 50 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QFG6_ARTAN) Solyc08g078340.3 3112 1597 1569 1143 1202 1158 1159 1139 1560 2891 2483 1550 1383 1385 1392 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G3DC38_CAPCH) AT5G47390 Solyc08g078345.1 40 16 12 17 14 30 21 39 29 15 41 17 18 21 26 Unknown protein Solyc08g078350.1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 Unknown protein Solyc08g078360.1 0 4 0 0 0 0 0 0 0 3 0 0 0 3 0 Unknown protein Solyc08g078370.4 735 444 499 422 319 345 435 387 397 491 430 319 352 444 552 Ribokinase, Carbohydrate kinase PfkB, Ribokinase-like protein (AHRD V3.3 *-* A0A2U1LX89_ARTAN) AT4G28706 Solyc08g078380.3 334 550 604 573 757 650 722 633 567 583 554 552 404 511 490 O-fucosyltransferase family protein (AHRD V3.3 *** A0A2U1M7E5_ARTAN) AT4G17430 Solyc08g078390.4 1543 1822 1764 1852 1987 1908 2080 2198 2981 2337 2385 2424 1764 2182 1976 peroxisomal acyl-CoA oxidase 1A AT4G16760 Solyc08g078400.3 68 50 49 52 7 3 2 6 35 26 39 24 27 120 126 peroxisomal acyl-CoA oxidase 1B Solyc08g078410.2 18 4 12 4 0 1 5 0 8 21 35 2 2 4 13 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3AF14_CAPAN) Solyc08g078420.2 17 1 11 20 14 4 1 3 13 23 24 9 7 16 1 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3AF14_CAPAN) Solyc08g078430.4 1588 1510 1263 1215 1155 1205 1053 1268 1681 1423 1228 1271 1743 1690 1495 U4/U6 small nuclear ribonucleoprotein Prp31-like (AHRD V3.3 *** A0A2I4E1L8_9ROSI) AT1G60170 Solyc08g078440.3 480 449 395 300 217 213 251 315 317 306 320 345 371 492 347 sphingomyelin phosphodiesterase (AHRD V3.3 *** AT5G47400.1) AT5G47400 Solyc08g078450.3 2 1 0 0 4 8 9 2 1 1 11 5 9 0 0 Exostosin-like (AHRD V3.3 *** A0A200PV90_9MAGN) AT4G16745 Solyc08g078460.3 0 0 0 0 2 13 3 1 2 0 0 1 3 0 0 Oxidoreductase family protein (AHRD V3.3 *** A0A2U1N6F1_ARTAN) AT4G17370 Solyc08g078470.4 200 304 266 330 516 466 420 447 344 332 296 515 138 228 182 FHA domain-containing protein (AHRD V3.3 *** A0A2G2V1D7_CAPBA) AT4G14490 Solyc08g078480.3 357 363 874 682 598 668 534 300 276 283 812 363 483 467 835 transmembrane protein (AHRD V3.3 *** AT4G16695.1) AT4G16695 Solyc08g078490.4 36 127 156 160 147 195 174 172 145 89 67 132 105 153 88 Formyltetrahydrofolate deformylase-like protein (AHRD V3.3 *** A0A2K3NLL3_TRIPR) AT5G47435 Solyc08g078500.3 98 135 160 225 110 126 146 120 191 142 158 123 148 172 229 auxin canalization protein (DUF828) (AHRD V3.3 *** AT4G17350.1) AT4G17350 Solyc08g078510.3 2003 543 908 424 79 94 113 94 343 699 974 154 877 618 519 GRAM domain family protein (AHRD V3.3 *-* A0A2U1NIK8_ARTAN) AT5G13200 Solyc08g078520.4 265 465 485 677 376 452 443 456 608 299 465 462 374 544 378 electron transporter%2C putative (Protein of unknown function%2C DUF547) (AHRD V3.3 *** AT5G47380.4) AT5G47380 Solyc08g078530.4 6878 6690 5485 5655 6075 6376 6481 7777 7971 6586 5085 7319 5446 7142 5366 Agenet domain-containing protein (AHRD V3.3 *** A0A1Q3BYA3_CEPFO) AT4G17330 Solyc08g078540.3 929 970 1085 1239 1380 1468 1415 1240 970 900 1087 1023 1009 1085 844 O-fucosyltransferase (AHRD V3.3 *** A0A2P5AVU2_PARAD) AT4G16650 Solyc08g078550.1 20 6 36 11 3 8 7 2 9 4 10 0 7 17 15 Metalloendoproteinase 1-like protein (AHRD V3.3 *** A0A2K3NXA7_TRIPR) AT4G16640 Solyc08g078560.3 627 1057 814 638 552 570 598 512 490 453 684 586 1197 924 835 hypothetical protein (AHRD V3.3 *** AT4G17310.9) AT4G17310 Solyc08g078570.3 31 53 30 54 21 31 28 32 50 17 76 37 43 36 71 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** A0A2U1KP81_ARTAN) AT5G47460 Solyc08g078580.3 8 5 4 14 45 35 26 37 21 21 17 10 12 7 5 WAT1-related protein (AHRD V3.3 *** A0A0V0IGS4_SOLCH) AT5G47470 Solyc08g078590.1 3 23 12 5 48 40 35 45 19 9 28 26 18 19 4 Zinc finger protein (AHRD V3.3 *** A0A200PXY0_9MAGN) Solyc08g078600.3 759 548 507 416 449 445 411 413 633 555 482 476 580 620 437 DNA-directed RNA polymerase III subunit Rpc5 (AHRD V3.3 *** A0A200Q253_9MAGN) AT5G49530 Solyc08g078610.4 1827 1240 1253 918 874 1166 1118 1042 1067 861 1079 1105 1127 1165 1318 Zinc knuckle (CCHC-type) family protein (AHRD V3.3 *** AT3G62330.1) AT3G62330 Solyc08g078620.1 5 25 0 8 15 12 10 13 3 10 17 12 11 9 6 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I4H4A1_9ROSI) AT3G12460 Solyc08g078630.4 474 320 318 279 232 298 317 215 234 249 310 265 327 307 345 BnaA10g16580D protein (AHRD V3.3 *** A0A078HJ62_BRANA) AT5G18250 Solyc08g078640.3 71 393 253 856 901 867 1014 825 367 164 245 409 19 177 155 Pectinesterase (AHRD V3.3 *** A0A2G3DBT2_CAPCH) AT5G47500 Solyc08g078650.3 10 1 6 5 0 0 0 0 0 7 2 1 4 15 0 Glyco_transf_8 domain-containing protein (AHRD V3.3 *** A0A1Q3D6P8_CEPFO) AT2G35710 Solyc08g078660.3 860 1030 782 1139 969 1136 1148 784 769 694 884 727 1063 1082 1011 Chaperone protein dnaJ 13 (AHRD V3.3 *** A0A1U8GDM7_CAPAN) AT2G35720 Solyc08g078670.2 5037 1636 939 814 372 324 367 288 432 2751 1285 861 359 471 448 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A061G3B8_THECC) AT4G16563 Solyc08g078680.4 20 41 72 19 23 18 25 15 28 39 65 19 30 38 53 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A1P8BCX9_ARATH) AT5G47510 Solyc08g078690.3 192 265 387 300 425 460 367 347 327 327 331 293 272 272 273 Vesicle-associated protein 1-1 (AHRD V3.3 *** A0A2G3BPQ3_CAPCH) Solyc08g078700.2 52 19 70 32 27 25 32 6 40 12 1 36 44 16 3 mitochondrial small heat shock protein AT4G25200 Solyc08g078710.3 6 9 0 3 6 9 6 3 1 2 0 4 2 13 1 Heat shock protein hsp20 (AHRD V3.3 *-* W7TIC4_9STRA) AT5G47600 Solyc08g078720.3 374 329 303 252 257 245 223 261 220 191 243 325 596 457 288 14.7 kDa heat shock protein (AHRD V3.3 *-* A0A1J3HSD8_NOCCA) AT5G47600 Solyc08g078730.3 0 0 4 1 0 0 0 1 2 1 7 0 0 1 1 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *** AT2G35730.1) AT2G35730 Solyc08g078740.1 174 172 178 125 167 187 161 198 236 157 174 171 206 203 207 leukocyte receptor cluster member 1 (AHRD V3.3 *** A0A2I4GX21_9ROSI) Solyc08g078750.4 586 583 631 686 571 553 529 392 421 299 460 371 580 650 788 DEAD-box ATP-dependent RNA helicase 41 (AHRD V3.3 *** A0A2G2XKW5_CAPBA) Solyc08g078760.1 190 96 23 87 0 0 0 1 35 7 3 2 109 93 339 transmembrane protein (AHRD V3.3 *** AT4G17250.1) Solyc08g078770.1 15 6 0 7 0 0 0 0 0 2 1 0 0 3 12 transmembrane protein (AHRD V3.3 *** AT4G17250.1) AT5G47580 Solyc08g078780.2 297 268 181 178 101 120 109 154 283 296 206 141 212 224 229 transmembrane protein (AHRD V3.3 *** AT4G17250.1) AT5G47580 Solyc08g078790.1 21 28 20 27 23 41 18 16 34 26 22 16 42 26 31 hypothetical protein (AHRD V3.3 *** AT2G35736.2) AT2G35736 Solyc08g078800.1 4562 5125 5979 6207 7787 8241 7142 7824 4247 4932 4121 7145 5157 5784 3506 GRAS family transcription regulator (AHRD V3.3 *** K7RXJ6_CAPAN) Solyc08g078810.1 97 134 95 138 247 221 122 270 142 149 48 168 93 95 45 Unknown protein Solyc08g078820.3 878 247 457 429 215 245 274 228 325 616 627 314 295 350 547 Autophagy-related protein (AHRD V3.3 *** F1JYZ6_SOLLC) AT4G16520 Solyc08g078830.1 0 0 14 0 0 1 2 0 1 2 1 7 0 0 0 Unknown protein Solyc08g078840.3 0 2 1 1 1 0 0 0 2 3 1 1 0 0 12 Root meristem growth factor 6 (AHRD V3.3 *** A0A2G3CC16_CAPCH) Solyc08g078843.1 13 46 61 57 51 63 59 52 49 59 38 54 45 58 68 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein (AHRD V3.3 --* AT4G16510.2) Solyc08g078847.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g078850.3 100 112 134 76 90 71 43 87 157 144 119 73 105 99 113 lactate dehydrogenase AT4G17260 Solyc08g078860.4 1424 1601 1544 1539 1652 1547 1565 1484 1301 1229 1400 1195 1883 1484 1872 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (AHRD V3.3 *** A0A1U8GDQ0_CAPAN) AT5G47570 Solyc08g078870.3 1389 1197 466 1776 247 328 241 172 437 2226 542 231 1473 1171 1387 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) AT5G46900 Solyc08g078880.3 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 Cation/H(+) antiporter 15 (AHRD V3.3 *** A0A2G3CC26_CAPCH) AT2G13620 Solyc08g078885.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g078890.3 40 397 146 666 1094 690 613 1524 74 507 126 680 113 368 143 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *-* Q9SXE7_ARATH) AT1G62500 Solyc08g078900.1 147 811 522 637 1453 1139 872 1347 350 674 525 327 1073 682 374 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) AT1G62510 Solyc08g078910.1 0 49 3 70 124 116 111 150 5 0 8 6 7 25 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc08g078920.2 1 2 14 30 5 3 3 1 2 0 0 10 4 12 1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) AT5G46900 Solyc08g078930.1 0 0 3 4 3 6 4 1 2 0 1 6 0 3 5 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) Solyc08g078940.1 10 2152 164 389 3196 2264 2282 2720 259 305 92 476 102 161 40 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** F4IC43_ARATH) Solyc08g078950.3 335 490 203 306 652 552 563 597 1087 997 603 448 151 154 171 NIT1 AT1G12110 Solyc08g078960.4 1181 1522 925 1198 1246 1325 1430 1100 2086 1224 2038 1309 1164 920 1431 Oxysterol-binding protein (AHRD V3.3 *** A0A200Q8D8_9MAGN) Solyc08g078970.1 14 19 1 19 38 38 29 24 16 6 11 4 11 19 9 Unknown protein Solyc08g078980.1 0 1 1 2 8 0 0 1 1 2 8 4 0 1 0 Unknown protein Solyc08g078990.3 186 308 275 399 330 251 301 349 294 393 267 298 291 298 222 Phosphatidic acid phosphatase type 2/haloperoxidase (AHRD V3.3 *** A0A200PS40_9MAGN) AT4G22550 Solyc08g079000.4 16 4 21 8 5 5 8 13 9 10 6 23 9 6 2 Unknown protein Solyc08g079010.1 84 120 183 109 104 167 157 134 130 74 137 199 94 120 112 C2H2-like zinc finger protein (AHRD V3.3 *-* A0A2U1KP34_ARTAN) AT1G62520 Solyc08g079020.3 325 412 358 492 484 369 369 440 427 409 232 394 400 354 390 Adenine phosphoribosyltransferase (AHRD V3.3 *** Q45RT2_PHYPA) AT4G12440 Solyc08g079030.4 51 242 171 309 513 456 305 334 251 95 139 243 220 214 178 hypothetical protein (DUF863) (AHRD V3.3 *-* AT1G62530.2) Solyc08g079040.1 117 151 164 213 171 191 150 163 219 278 239 208 210 126 176 Xyloglucan galactosyltransferase KATAMARI1 (AHRD V3.3 *** A0A2K3NCT4_TRIPR) AT4G22580 Solyc08g079050.2 46 124 88 86 140 156 120 139 85 59 62 141 52 131 87 Transcription factor TGA like domain (AHRD V3.3 *** A0A200QXI2_9MAGN) AT4G22600 Solyc08g079055.1 4 3 1 2 5 8 5 8 8 9 10 11 8 14 7 Unknown protein Solyc08g079060.4 44 93 120 254 223 180 163 180 158 120 161 166 211 170 98 Trehalose 6-phosphate phosphatase (AHRD V3.3 *** A0A2G3DBS1_CAPCH) AT4G12430 Solyc08g079070.2 1016 1465 1937 1928 1870 1933 2013 1776 1836 1517 1868 1447 1714 1751 1850 transaldolase ToTAL2 AT1G12230 Solyc08g079080.5 6 28 44 40 7 3 9 1 20 19 15 11 20 19 103 Lycopersicon esculentum invertase 9 AT1G12240 Solyc08g079090.4 207 2494 2972 2335 4116 4530 4421 4292 2107 1087 2027 2274 842 1323 968 Monocopper oxidase-like protein sku5 (AHRD V3.3 *** A0A1J6IJ65_NICAT) AT4G12420 Solyc08g079100.3 2006 1300 1156 1294 1044 1090 859 1229 614 1293 881 1429 542 1650 430 CRABS CLAW 1b AT2G45190 Solyc08g079110.4 127 176 218 251 283 376 361 334 244 201 341 296 219 220 255 Thylakoid lumenal protein, chloroplastic (AHRD V3.3 *** A0A1U8GCA5_CAPAN) AT1G12250 Solyc08g079120.3 11 5 18 20 17 27 18 16 15 13 29 10 7 10 64 NAC domain-containing protein (AHRD V3.3 *** A0A2U1LJ98_ARTAN) AT1G62700 Solyc08g079130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Small auxin up-regulated RNA66 AT4G22620 Solyc08g079140.1 1 1 26 5 2 3 1 0 0 4 0 1 0 1 2 Small auxin up-regulated RNA67 AT4G22620 Solyc08g079150.1 28 12 53 14 28 13 14 23 21 40 37 39 42 21 37 Auxin-responsive protein SAUR32 (AHRD V3.3 *** A0A2G2XKY1_CAPBA) AT4G22620 Solyc08g079160.3 2 1 25 2 0 2 0 1 2 6 5 1 1 15 32 Vacuolar-processing enzyme (AHRD V3.3 *** A0A2G2XLA7_CAPBA) AT1G62710 Solyc08g079170.3 12598 10122 5493 5405 6617 6069 5735 6147 6090 5514 4638 5662 7505 6485 5796 Hsp70-Hsp90 organizing protein 1 (AHRD V3.3 *** A0A1U8GC69_CAPAN) AT1G62740 Solyc08g079180.3 952 2172 1116 989 1548 1515 1762 1501 1595 924 799 1014 1203 1002 1217 Elongation factor G (AHRD V3.3 *** A0A2G3AEH8_CAPAN) AT1G62750 Solyc08g079200.1 1039 945 1816 2845 14 20 10 2 496 1682 1412 362 421 696 330 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) AT5G46900 Solyc08g079210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g079230.1 2 3 27 35 9 8 17 8 9 13 1 16 1 11 10 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1PU47_ARTAN) AT5G46900 Solyc08g079240.4 372 394 426 275 231 265 259 292 365 219 395 309 283 365 569 dimethylallyl%2C adenosine tRNA methylthiotransferase (AHRD V3.3 *** AT1G62780.1) AT1G62780 Solyc08g079250.4 1012 1903 2034 2142 2652 2216 2267 2776 2098 2211 2065 2435 1903 1899 1630 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *** A0A2U1L4X0_ARTAN) AT1G62790 Solyc08g079260.3 6272 4973 3521 3132 3933 3290 3052 4552 4347 4396 2674 4228 5128 3988 3155 TPR repeat-containing thioredoxin TDX (AHRD V3.3 *-* A0A2G2XKR1_CAPBA) AT4G22670 Solyc08g079270.3 3 11 2 7 9 21 26 15 3 13 7 5 0 5 15 R2R3MYB transcription factor 42 AT4G22680 Solyc08g079280.3 655 381 354 566 208 271 239 236 540 586 438 571 466 402 386 Cytochrome P450 (AHRD V3.3 *** A0A1U9X605_THAGA) AT4G12320 Solyc08g079300.3 0 0 0 5 0 0 0 0 0 1 0 0 3 0 0 Cytochrome P450 (AHRD V3.3 *** A0A1U9X605_THAGA) AT4G12320 Solyc08g079310.4 88 69 1 20 1 3 5 2 21 18 7 17 24 36 40 Cytochrome P450 (AHRD V3.3 *** A0A1U9X605_THAGA) AT4G12320 Solyc08g079315.1 7 4 2 5 0 1 3 0 3 0 0 5 0 0 20 Cytochrome P450 (AHRD V3.3 *-* A0A1U9X605_THAGA) Solyc08g079330.2 0 0 0 0 1 0 2 0 1 0 0 0 0 0 1 Cytochrome P450 (AHRD V3.3 *** A0A1U9X605_THAGA) AT4G12320 Solyc08g083410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A1U9X605_THAGA) AT4G12320 Solyc08g083520.2 21 10 27 6 2 2 3 1 3 3 1 1 18 7 5 Cytochrome P450 (AHRD V3.3 *** A0A1U9X605_THAGA) AT4G12320 Solyc08g079350.3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A1U9X605_THAGA) AT4G12320 Solyc08g079370.2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A1U9X605_THAGA) AT4G12320 Solyc08g083510.3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A1U9X605_THAGA) AT4G12320 Solyc08g083500.2 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1QKU8_ARTAN) AT4G12320 Solyc08g079420.3 64 19 7 40 5 1 0 0 6 15 11 4 32 51 139 Cytochrome P450 (AHRD V3.3 *** A0A200QB17_9MAGN) Solyc08g079430.3 240 170 247 411 43 33 53 30 342 446 624 278 349 264 788 partialcopper-containing amine oxidase AT4G12290 Solyc08g079440.1 2016 1048 656 782 415 345 296 510 681 1152 559 817 845 791 701 UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** A0A2G3DBJ0_CAPCH) AT4G12250 Solyc08g079450.3 1000 783 682 967 832 838 784 726 838 941 663 827 819 906 990 Maspardin (AHRD V3.3 *** A0A200QB24_9MAGN) AT4G12230 Solyc08g079460.3 657 698 905 674 349 477 488 452 568 441 846 428 607 654 842 leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 (AHRD V3.3 *** A0A1U8G9J1_CAPAN) AT4G22730 Solyc08g079470.3 468 460 406 561 454 417 470 506 468 507 375 461 395 476 530 Glycine cleavage T-protein (AHRD V3.3 *** A0A200QAZ4_9MAGN) AT4G12130 Solyc08g079480.3 30 20 4 7 11 7 5 8 9 17 4 5 21 16 23 Ankyrin repeat/KH domain protein (DUF1442) (AHRD V3.3 *** O22136_ARATH) AT2G45360 Solyc08g079490.4 337 296 375 363 427 423 383 298 325 306 422 250 317 313 459 Class I peptide chain release factor (AHRD V3.3 *** Q84JF2_ARATH) AT1G62850 Solyc08g079500.3 1806 1471 1125 1462 1200 1476 1435 1431 1304 1453 1013 1492 1437 1483 1483 Myeloid leukemia factor (AHRD V3.3 *** A0A200QB29_9MAGN) AT4G22740 Solyc08g079510.3 348 459 601 498 458 481 433 465 562 480 649 599 485 626 350 IRK-interacting protein (AHRD V3.3 *** A0A2I4GUZ8_9ROSI) AT1G12330 Solyc08g079520.3 813 815 815 683 934 877 775 853 830 805 836 750 958 883 684 SNARE-interacting protein KEULE (AHRD V3.3 *** A0A1J3CBK9_NOCCA) AT1G12360 Solyc08g079530.3 150 345 196 224 416 435 379 511 428 250 153 330 211 233 125 Deoxyribodipyrimidine photo-lyase (AHRD V3.3 *** A0A2G3DBR9_CAPCH) AT1G12370 Solyc08g079540.4 5 15 11 25 25 40 40 24 26 7 24 15 4 8 11 Unknown protein Solyc08g079550.1 246 701 580 586 929 1086 1025 979 904 472 575 619 590 562 541 hypothetical protein (AHRD V3.3 *** AT1G12380.1) AT1G12380 Solyc08g079560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g079570.3 146 373 427 504 394 383 456 471 619 590 465 475 735 429 440 Methylsterol monooxygenase 1-2 (AHRD V3.3 *** A0A2G3DBV5_CAPCH) AT4G12110 Solyc08g079580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* XP_025886678.1) Solyc08g079590.3 82 34 110 135 8 19 21 13 77 53 225 29 93 86 120 PPR containing protein (AHRD V3.3 *** AT4G22758.1) AT4G22758 Solyc08g079600.3 413 343 390 512 204 213 279 259 463 477 666 337 769 484 358 hypothetical protein (AHRD V3.3 *-* AT2G27830.1) Solyc08g079610.3 472 377 582 567 470 601 595 391 370 378 616 374 463 528 771 Nucleotide excision repair, TFIIH, subunit TTDA (AHRD V3.3 *** A0A2U1NL58_ARTAN) AT1G12400 Solyc08g079620.3 362 541 442 441 707 604 529 780 693 566 449 585 657 516 422 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A1U8GA15_CAPAN) AT1G12410 Solyc08g079630.3 847 775 743 853 799 851 728 818 877 825 885 956 970 765 991 AT-hook motif nuclear-localized protein 1 (AHRD V3.3 *** A0A2G3AEB8_CAPAN) AT4G12080 Solyc08g079640.3 69 64 74 89 103 96 84 87 56 47 72 84 58 88 42 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200Q2H0_9MAGN) Solyc08g079650.3 455 368 669 442 427 486 437 302 509 281 550 407 349 460 425 ACT domain-containing protein (AHRD V3.3 *** A0A1Q3BQZ1_CEPFO) AT1G12420 Solyc08g079660.3 350 969 1162 829 1091 1078 1168 1030 1045 530 942 891 857 994 795 Clp protease-related protein, chloroplastic (AHRD V3.3 *** A0A1U8GJ95_CAPAN) AT4G12060 Solyc08g079670.3 698 511 584 563 460 591 580 409 456 467 818 465 427 500 774 SNARE associated Golgi protein (AHRD V3.3 *** A0A2U1NGK9_ARTAN) AT4G22850 Solyc08g079680.3 145 131 177 170 230 220 180 160 118 162 233 175 86 148 147 Ycf49-like protein (AHRD V3.3 *** A0A2G3DBL7_CAPCH) AT4G22830 Solyc08g079690.4 170 254 432 261 338 219 276 143 280 223 389 251 303 221 307 binding protein (AHRD V3.3 *-* AT3G60890.3) AT2G45450 Solyc08g079700.3 575 269 857 113 171 131 168 130 108 87 1121 277 279 169 466 Zinc finger A20 and AN1 domain stress-associated protein (AHRD V3.3 *** A0A2K3LX56_TRIPR) AT1G12440 Solyc08g079710.3 792 877 1003 762 734 741 792 740 821 650 913 743 832 733 670 Kinesin-like protein (AHRD V3.3 *** K4CNX1_SOLLC) AT1G12430 Solyc08g079720.3 35 13 30 25 16 11 10 7 19 10 29 11 10 20 19 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2G2XKJ2_CAPBA) AT4G12050 Solyc08g079730.2 84 132 105 212 201 182 147 120 103 100 71 93 97 86 90 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4HQ16_9ROSI) Solyc08g079740.3 58 212 424 263 264 392 309 230 302 125 353 307 161 204 372 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A0K9NNG1_ZOSMR) AT1G12460 Solyc08g079750.3 570 542 473 438 737 907 940 763 485 438 333 484 301 382 310 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3 *** Q6U5H3_ROSHC) AT1G62960 Solyc08g079760.4 828 1044 1407 1403 2323 2498 2304 2553 1064 1162 1117 1753 737 1023 615 Protein TPX2 (AHRD V3.3 *** A0A1J3JM82_NOCCA) AT4G22860 Solyc08g079770.3 3 10 0 12 0 4 0 0 16 14 6 8 16 4 9 Guard cell S-type anion channel SLAC1 (AHRD V3.3 *** A0A2G2XKK1_CAPBA) AT1G12480 Solyc08g079780.2 2 0 4 3 0 0 0 0 3 5 1 0 3 4 0 Cupredoxin (AHRD V3.3 *-* A0A2U1Q6A3_ARTAN) AT3G17675 Solyc08g079790.1 111 236 190 231 258 280 228 237 212 187 141 195 167 165 205 Nucleotide-sugar transporter family protein (AHRD V3.3 *** A0A2U1PWK4_ARTAN) AT1G12500 Solyc08g079800.4 43 81 82 100 98 128 136 112 158 50 69 78 95 80 107 Growth-regulating factor 10 (AHRD V3.3 *** A0A2G3AE89_CAPAN) Solyc08g079810.4 1328 654 782 957 426 573 583 483 635 686 671 532 776 999 755 obscurin-like protein (AHRD V3.3 *** AT1G73970.1) AT1G73970 Solyc08g079820.3 594 463 447 572 485 412 326 511 390 556 276 381 446 523 595 Nudix hydrolase 14, chloroplastic (AHRD V3.3 *** A0A2G3AE90_CAPAN) AT4G11980 Solyc08g079830.4 348 431 397 441 422 370 380 393 556 492 364 549 650 489 389 copper/zinc superoxide dismutase copper chaperone precursor AT1G12520 Solyc08g079840.2 273 231 220 249 177 212 133 205 265 252 263 229 214 196 249 LESUBENDO L.esculentum subtilisin-like endoprotease Solyc08g079850.3 300 814 608 625 585 658 433 628 793 520 543 762 608 439 310 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g079860.2 35 11 58 53 0 1 0 2 19 16 31 6 25 37 24 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g079870.3 3772 1285 326 461 2 0 0 4 176 927 461 27 3774 2842 1205 subtilisin Solyc08g079880.2 48 7 40 64 0 0 1 0 38 52 74 13 35 38 7 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g079890.2 35 11 31 73 2 3 0 1 43 35 87 11 16 20 9 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g079900.3 287 484 120 20 0 0 0 2 10 256 46 11 1999 596 82 Subtilisin-like protease (AHRD V3.3 *** Q9LWA4_SOLLC) Solyc08g079910.2 10 2 1 0 0 0 0 0 0 3 0 0 2 14 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g079920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g079930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA4_SOLLC) Solyc08g079940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *-* Q9LWA4_SOLLC) Solyc08g079950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *-* Q9LWA4_SOLLC) Solyc08g079960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *-* Q9LWA3_SOLLC) Solyc08g079970.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g079980.1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g079990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g080000.3 348 424 517 415 436 460 460 400 413 304 284 360 380 387 340 Calponin homology domain-containing protein (AHRD V3.3 *-* A0A2U1PZE2_ARTAN) Solyc08g080010.1 24 27 49 37 49 85 54 41 24 14 25 39 27 37 22 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc08g080020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine protease inhibitor potato inhibitor I-type family protein (AHRD V3.3 *** Q9STF8_ARATH) AT3G46860 Solyc08g080030.4 431 297 270 237 379 245 218 294 324 325 184 258 327 266 200 Glyoxylate/hydroxypyruvate reductase HPR3 (AHRD V3.3 *** A0A2G3DBG2_CAPCH) Solyc08g080040.4 59 395 349 329 178 201 245 181 932 307 201 870 1357 652 1206 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4J670_ARATH) AT4G22880 Solyc08g080050.4 929 842 875 1027 1269 1238 1198 1105 1021 1043 965 1083 616 701 988 PGR5-like protein 1A, chloroplastic (AHRD V3.3 *** A0A2G3AE69_CAPAN) AT4G22890 Solyc08g080060.4 2 0 0 0 0 0 3 0 1 2 0 1 0 2 2 Expansin (AHRD V3.3 *** K4CP06_SOLLC) AT1G12560 Solyc08g080070.1 40 97 152 235 192 166 141 135 188 115 132 97 126 120 163 Transmembrane protein, putative (DUF1191) (AHRD V3.3 *** Q8GYJ5_ARATH) AT4G22900 Solyc08g080080.4 145 229 298 257 349 309 315 325 263 201 214 287 188 247 112 WD40 repeat (AHRD V3.3 *** A0A200PPM9_9MAGN) AT4G22910 Solyc08g080090.3 194 70 44 61 11 36 23 27 49 55 73 22 98 114 102 green flesh AT4G22920 Solyc08g080100.4 44 26 24 21 43 58 46 34 45 21 11 24 71 22 72 MADS box transcription factor AGAMOUS (AHRD V3.3 *-* A0A1Q1NK16_PAELC) AT4G22950 Solyc08g080105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc08g080110.3 1415 1058 990 886 762 719 683 846 1062 1004 1044 933 1137 1046 954 FAM63A-like protein (DUF544) (AHRD V3.3 *-* Q8LE63_ARATH) AT4G11860 Solyc08g080120.3 208 147 178 200 59 127 72 101 108 103 164 109 147 208 116 LEU76410 homeobox 2 AT1G62990 Solyc08g080130.3 349 351 391 264 152 181 156 198 313 246 328 245 590 562 238 phospholipase PLDb1 Solyc08g080140.4 737 2215 1558 1643 2317 2195 2136 2190 2289 1117 1474 1534 1810 1801 1930 3,5-epimerase/4-reductase (AHRD V3.3 *** A0A1Z5KIY2_FISSO) AT1G63000 Solyc08g080150.1 311 256 369 404 447 317 345 275 409 232 396 302 353 315 268 TCP transcription factor 20 AT2G45680 Solyc08g080160.4 1 24 15 27 11 51 50 18 31 36 59 61 16 21 22 3-hydroxy-3-methylglutaryl coenzyme A synthase (AHRD V3.3 *-* A0A2G3B388_CAPCH) Solyc08g080170.3 664 6753 1573 3294 4689 3733 4192 5070 10206 7614 4979 10973 4260 5526 1936 3-hydroxy-3-methylglutaryl coenzyme A synthase (AHRD V3.3 *** A0A2G3DBH4_CAPCH) AT4G11820 Solyc08g080180.1 129 106 76 98 56 47 43 49 58 65 115 65 198 103 71 Molybdenum cofactor sulfurase-like protein (AHRD V3.3 *** A0A2K3L0M9_TRIPR) Solyc08g080190.4 336 740 289 457 509 510 414 463 984 636 409 646 533 286 150 Glucose-methanol-choline (GMC) oxidoreductase family protein (AHRD V3.3 *** A0A2U1QFE7_ARTAN) AT1G12570 Solyc08g080200.4 1521 2261 1377 2105 2078 2170 2339 2003 1405 1558 914 1240 1880 1347 1488 SPX domain-containing protein (AHRD V3.3 *** D7MDY2_ARALL) AT4G22990 Solyc08g080220.3 202 324 328 375 301 481 398 410 414 291 240 401 227 440 312 DNA-directed RNA polymerase subunit (AHRD V3.3 *** A0A1U8G9I3_CAPAN) AT1G63020 Solyc08g080230.1 55 25 18 53 30 45 40 19 9 21 19 9 10 24 31 Unknown protein Solyc08g080240.3 176 343 539 526 568 568 596 550 443 265 416 379 446 473 545 NADH-ubiquinone oxidoreductase (AHRD V3.3 *** A0A2P4Q047_RHIID) AT5G18800 Solyc08g080250.4 319 393 357 376 355 396 392 327 316 239 354 364 322 404 400 APO protein 1, chloroplastic (AHRD V3.3 *** A0A2G2XKE1_CAPBA) AT1G64810 Solyc08g080260.4 632 815 805 795 584 690 829 635 602 506 750 582 954 876 807 BnaA02g21600D protein (AHRD V3.3 *** A0A078IB89_BRANA) AT4G11790 Solyc08g080270.3 19 26 38 37 23 13 9 17 21 22 44 9 52 38 18 UDP-galactose/UDP-glucose transporter 2-like (AHRD V3.3 *** A0A2I4GWU4_9ROSI) Solyc08g080280.3 37 68 122 116 93 111 94 102 179 81 137 128 83 63 26 hypothetical protein (AHRD V3.3 *-* AT4G23020.2) AT4G11780 Solyc08g080290.4 85 112 761 148 27 4 8 11 65 119 1346 54 43 82 132 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2XKF3_CAPBA) AT1G12630 Solyc08g080300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sugar transporter protein 6 Solyc08g080310.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4EM57_9ROSI) AT4G23030 Solyc08g080320.3 106 49 146 75 32 28 27 32 111 65 116 33 77 55 122 BAG family molecular chaperone regulator 2 (AHRD V3.3 *** A0A1J3K248_NOCCA) Solyc08g080340.3 206 431 319 356 558 418 458 537 440 434 279 407 422 293 185 Lysophospholipid acyltransferase 1 (AHRD V3.3 *** A0A2G3DBB5_CAPCH) AT1G12640 Solyc08g080360.3 437 324 638 446 368 360 408 287 601 456 846 478 438 417 543 F-box protein PP2-A15 (AHRD V3.3 *** A0A2G2Y8Y0_CAPAN) AT1G12710 Solyc08g080370.3 1121 1788 1850 1932 2225 2008 1974 2133 2547 1891 1909 2061 1842 2069 1956 Acetylornithine aminotransferase, mitochondrial (AHRD V3.3 *** A0A2G3AE76_CAPAN) AT1G80600 Solyc08g080380.4 420 169 183 150 65 74 81 59 245 220 212 201 154 239 283 Cytochrome P450 (AHRD V3.3 *** A0A2U1Q499_ARTAN) Solyc08g080390.3 340 95 99 130 35 43 23 16 75 123 141 31 141 147 181 Cytochrome P450 (AHRD V3.3 *** A0A2U1KE50_ARTAN) Solyc08g080400.2 66 633 654 966 1383 2070 1822 1577 790 303 558 808 90 362 335 Transcription factor GRAS (AHRD V3.3 *** A0A200QUK0_9MAGN) AT1G63100 Solyc08g080410.3 967 1042 1130 928 1056 953 892 1107 1318 1252 1051 1101 1401 1322 1205 Plant ubx domain-containing protein 8 (AHRD V3.3 *** A0A1J6KG92_NICAT) AT4G11740 Solyc08g080420.4 989 744 847 842 974 989 962 871 692 846 664 717 790 866 849 GPI transamidase subunit PIG-U (AHRD V3.3 *** A0A200QUK8_9MAGN) AT1G63110 Solyc08g080430.2 8 17 94 20 31 35 49 51 66 14 46 70 11 16 53 Cytochrome P450 (AHRD V3.3 *** A0A200QUP8_9MAGN) AT1G12740 Solyc08g080450.3 1 2 0 0 2 0 1 6 2 0 0 0 0 0 0 Protein HAPLESS 2 (AHRD V3.3 *** A0A2G3AE32_CAPAN) AT4G11720 Solyc08g080453.1 1 14 24 20 41 30 25 65 10 10 26 19 17 27 20 Serine/threonine-protein kinase CTR1 (AHRD V3.3 *** A0A2G3DBE0_CAPCH) Solyc08g080457.1 9 26 46 29 38 46 65 51 26 22 22 18 14 30 59 Serine/threonine-protein kinase CTR1 (AHRD V3.3 *-* A0A2G3AE65_CAPAN) Solyc08g080470.3 1514 2133 3687 2444 3478 3966 2960 4254 2322 2668 2532 3127 2454 2917 1668 SUN-like protein 23 AT4G23060 Solyc08g080480.3 0 0 6 1 0 0 0 0 0 1 1 0 0 2 1 2S sulfur-rich seed storage protein 2-like (AHRD V3.3 *** XP_004245641.1) AT5G54740 Solyc08g080490.3 0 0 0 5 1 3 4 1 0 0 0 0 0 0 0 2S albumin (AHRD V3.3 *-* B6EU55_BEREX) AT5G54740 Solyc08g080500.3 1042 1086 1284 1157 1015 692 732 1027 1020 2215 949 1309 1230 946 947 Rhomboid-like protein (AHRD V3.3 *** A0A1U8G8L0_CAPAN) Solyc08g080510.4 466 892 923 745 893 957 996 1009 704 667 509 864 965 1012 519 Replication factor C subunit 2 (AHRD V3.3 *** A0A2G3DBG1_CAPCH) AT1G63160 Solyc08g080520.4 676 489 574 451 532 534 673 507 474 484 487 487 498 523 618 DUF810 domain-containing protein (AHRD V3.3 *** A0A1Q3BM37_CEPFO),Pfam:PF05664 AT4G11670 Solyc08g080530.1 1 0 0 0 0 0 0 0 0 1 0 0 5 2 0 C2 calcium-dependent membrane targeting (AHRD V3.3 *** A0A2U1N7N9_ARTAN) Solyc08g080540.3 196 52 188 60 68 89 80 40 61 30 71 45 84 68 59 Heat stress transcription factor B-2b (AHRD V3.3 *** A0A2G3DB98_CAPCH) AT4G11660 Solyc08g080550.1 624 688 550 579 525 554 519 570 666 530 456 695 717 795 625 DEAD-box ATP-dependent RNA helicase 47A (AHRD V3.3 *** A0A2G3DB95_CAPCH) AT1G12770 Solyc08g080560.3 24 5 12 14 6 3 4 5 7 28 21 9 8 4 3 CASP-like protein (AHRD V3.3 *-* A0A2G3DB85_CAPCH) Solyc08g080570.4 2616 711 528 439 216 214 177 282 959 2180 1282 988 547 791 600 UDP-glucose 4-epimerase-like protein (AHRD V3.3 *** A0A2K3NI12_TRIPR) AT1G12780 Solyc08g080580.4 166 250 225 178 292 292 235 253 227 183 159 300 241 211 122 Myb (AHRD V3.3 *** Q948S4_TOBAC) Solyc08g080590.3 2167 3113 2340 1747 2601 2015 2022 3218 4183 4863 2299 2373 3484 1459 1523 Thaumatin-like protein (AHRD V3.3 *-* A0A2G3DBA4_CAPCH) Solyc08g080610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pathogenesis-related thaumatin family protein (AHRD V3.3 *** A0A2K3LJG6_TRIPR) Solyc08g080620.1 124 231 30 152 0 0 0 0 24 726 243 70 1987 822 105 PR-5x Solyc08g080630.4 202 62 44 75 0 0 0 0 3 31 1 1 20 56 179 Ethylene-responsive proteinase inhibitor 1 (AHRD V3.3 *** A0A1U8G7N9_CAPAN) AT2G38870 Solyc08g080640.2 4779 1755 2125 3631 0 6 3 1 280 1168 675 138 1897 2610 5725 NP24 protein precursor Solyc08g080650.3 8994 2799 2474 5052 0 3 1 3 957 1410 1191 377 5762 5459 14341 PATHOGENESIS RELATED PROTEIN P23 Solyc08g080660.1 355 119 61 143 0 1 0 1 6 55 27 2 11 329 72 Pathogenesis-related thaumatin family protein (AHRD V3.3 *** A0A2K3LJG6_TRIPR) Solyc08g080670.1 290 83 71 200 0 0 0 0 1 17 24 0 26 92 129 Pathogenesis-related 5-like protein Solyc08g080680.4 125 152 282 318 132 182 149 161 237 222 234 171 265 204 260 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LWF9_ARTAN) AT1G63220 Solyc08g080690.4 5460 3255 2710 2644 2879 2994 3025 2989 3283 3291 2688 2961 2137 2697 3553 Methyl-CpG binding domain protein (AHRD V3.3 *-* A0A2K3NPJ5_TRIPR) AT1G63240 Solyc08g080700.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** Q1PE81_ARATH) AT4G10220 Solyc08g080710.3 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** F4JLL4_ARATH) AT4G10220 Solyc08g080730.3 140 298 356 374 562 581 521 574 355 209 361 454 305 264 236 Tetraspanin-10 (AHRD V3.3 *** A0A2G2XKQ0_CAPBA) AT1G63260 Solyc08g080740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3AQI7_CEPFO) Solyc08g080745.2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3CSL7_CEPFO) AT4G10220 Solyc08g080750.4 47 59 87 53 42 20 23 20 53 24 77 27 27 24 87 LURP-one-like protein (AHRD V3.3 *** A0A1P8AWJ7_ARATH) AT1G63410 Solyc08g080760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LURP-one-like protein (AHRD V3.3 *** A0A1P8AWJ7_ARATH) AT3G14260 Solyc08g080770.3 0 9 0 3 0 1 2 1 11 3 20 4 0 0 10 LURP-one-like protein (AHRD V3.3 *** A0A1P8AWJ7_ARATH) AT3G14260 Solyc08g080780.4 228 1093 1150 925 1391 1549 1630 1477 1975 858 1062 1246 738 953 1879 Myosin heavy chain-related protein (AHRD V3.3 *** Q9C8T4_ARATH) AT1G63300 Solyc08g080790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** F4JLL4_ARATH) AT4G10220 Solyc08g080800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** Q1PE81_ARATH) AT4G10220 Solyc08g080810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** Q1PE81_ARATH) AT4G10220 Solyc08g080820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** Q1PE81_ARATH) AT4G10220 Solyc08g080830.3 1726 1741 1916 1845 1803 1990 1887 1935 1998 1974 2010 1707 1517 1611 1951 Receptor kinase, putative (AHRD V3.3 *** B9RC93_RICCO) AT1G63430 Solyc08g080840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** Q1PE81_ARATH) Solyc08g080850.4 902 1015 864 514 637 697 570 597 765 500 742 556 1122 1002 1108 Serine/threonine-protein kinase RIO1 (AHRD V3.3 *** A0A2G2XK91_CAPBA) AT5G37350 Solyc08g080860.4 85 45 38 38 20 21 9 9 34 49 29 34 82 54 44 patatin-like phospholipase domain protein (AHRD V3.3 *-* AT1G76980.1) AT1G76980 Solyc08g080870.3 0 2 9 12 16 2 4 14 3 9 11 7 6 4 4 Heavy metal atpase 5 (AHRD V3.3 *** A0A2U1LKL5_ARTAN) Solyc08g080890.3 44 397 296 368 849 860 900 723 295 105 368 302 327 458 400 E1-E2_ATPase domain-containing protein/HMA domain-containing protein/Hydrolase domain-containing protein (AHRD V3.3 *** A0A1Q3AQK6_CEPFO) AT1G63440 Solyc08g080900.3 746 527 413 335 265 301 314 283 357 543 467 279 619 421 420 Glutathione S-transferase (AHRD V3.3 *** A0A200QUC6_9MAGN) AT5G41210 Solyc08g080910.3 403 446 443 429 272 269 277 242 359 466 389 336 602 525 425 Glutathione S-transferase (AHRD V3.3 *** A0A200QUC6_9MAGN) AT5G41210 Solyc08g080920.3 528 392 433 344 297 437 380 289 394 362 479 443 436 420 395 Coenzyme A biosynthesis bifunctional protein CoaBC (AHRD V3.3 *-* A0A316X0L4_9FLAO) AT3G18030 Solyc08g080930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan galactosyltransferase KATAMARI1 (AHRD V3.3 *** A0A1J3J5G4_NOCCA) AT1G63450 Solyc08g080940.3 1360 1193 1349 906 1078 876 921 1092 1238 1544 1174 1314 1148 1071 1189 glutathione peroxidase like encoding 1 AT4G11600 Solyc08g080950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1M803_ARTAN) Solyc08g080960.4 353 745 1533 1183 938 1251 1206 845 577 502 815 828 820 891 625 AT-hook motif nuclear-localized protein 10 (AHRD V3.3 *** A0A2G3AP54_CAPAN) AT1G63470 Solyc08g080970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g080980.4 321 289 565 425 521 407 330 380 407 359 298 422 404 379 252 Unknown protein Solyc08g080990.3 6 93 36 33 148 123 135 139 30 12 74 53 12 60 36 Unknown protein Solyc08g081000.3 1681 1090 950 831 730 776 838 779 984 1139 718 833 1093 975 938 Transcription factor jumonji (JmjC) domain-containing protein (AHRD V3.3 *** A0A1P8AP94_ARATH) AT1G63490 Solyc08g081010.3 921 1590 1270 1307 1698 1504 1455 1685 1636 1159 1086 1192 1658 1736 1539 gamma-glutamylcysteine synthetase 1 AT4G23100 Solyc08g081020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** Q1PE81_ARATH) Solyc08g081030.1 1031 583 765 648 424 528 486 424 645 564 693 379 597 501 1042 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1PHB2_ARTAN) AT4G11570 Solyc08g081040.3 132 88 86 74 67 88 97 53 91 71 131 73 96 82 121 RNAse P, Rpr2/Rpp21 subunit (AHRD V3.3 *-* A0A2U1KVN4_ARTAN) AT5G41270 Solyc08g081050.4 1824 1164 1114 938 845 921 827 960 1064 1191 1055 1038 1143 1136 1145 Bromo adjacent homology (BAH) domain (AHRD V3.3 *-* A0A200QRT9_9MAGN) AT4G11560 Solyc08g081060.3 292 658 697 804 1040 1161 990 924 848 527 881 742 545 669 531 DUF3527 domain-containing protein (AHRD V3.3 *** A0A1Q3AQL6_CEPFO) AT4G11450 Solyc08g081070.3 146 552 347 545 766 880 917 715 479 311 352 443 405 528 464 Mitochondrial substrate carrier family protein (AHRD V3.3 *** F4JP07_ARATH) AT4G11440 Solyc08g081080.3 411 294 287 352 287 312 347 297 350 308 286 293 377 420 449 DUF3531 domain-containing protein (AHRD V3.3 *** A0A1Q3DBE8_CEPFO) AT5G08400 Solyc08g081090.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Organic cation/carnitine transporter (AHRD V3.3 *** A0A2K3MXI9_TRIPR) Solyc08g081100.4 951 1490 1498 1852 2268 2515 2465 2199 1320 1510 1860 1809 1071 1457 1337 p-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein (AHRD V3.3 *-* A0A1P8ATA6_ARATH) Solyc08g081110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g081120.4 178 420 266 310 531 455 471 739 507 412 188 515 318 384 273 Kinesin-4 (AHRD V3.3 *-* A0A2G3DAJ4_CAPCH) Solyc08g081130.4 469 322 314 407 291 400 357 329 341 280 388 361 279 277 329 hypothetical protein (AHRD V3.3 *** AT4G23330.4) Solyc08g081140.4 1635 2218 2058 2106 3174 3768 3408 3204 2854 2074 2102 2822 1705 1937 2094 bHLH transcription factor 090 AT5G41315 Solyc08g081150.4 846 1193 884 734 700 800 808 976 609 559 592 819 1256 1099 610 GMP synthase [glutamine-hydrolyzing] (AHRD V3.3 *** A0A2G3DAK4_CAPCH) AT1G63660 Solyc08g081160.3 417 641 584 684 642 554 542 683 838 552 421 545 580 509 442 DUF3741 domain-containing protein/DUF4378 domain-containing protein (AHRD V3.3 *-* A0A1Q3CNJ4_CEPFO) Solyc08g081170.4 910 699 721 849 488 526 617 517 643 610 586 712 538 788 761 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase (AHRD V3.3 *** A0A1J3G2W3_NOCCA) AT1G63680 Solyc08g081180.3 781 713 731 809 1155 1079 1006 1238 949 1076 741 870 610 659 657 Signal peptide peptidase-like 4 (AHRD V3.3 *** A0A2G2XJN7_CAPBA) AT1G63690 Solyc08g081190.3 18088 20565 15843 20148 28767 26470 23394 27660 22455 21564 19909 20436 10560 13811 14627 plasma membrane intrinsic protein 1.5 AT4G23400 Solyc08g081200.3 940 1088 1161 1216 1333 1059 1280 1188 1424 1145 1269 1133 1014 992 896 Short-chain dehydrogenase TIC 32, chloroplastic (AHRD V3.3 *** A0A2G2XJP0_CAPBA) AT4G11410 Solyc08g081210.4 1921 1131 1058 1165 730 1035 966 924 979 1327 914 830 1089 1102 938 MAP kinase kinase kinase 66 Solyc08g081220.1 331 512 378 602 147 187 133 131 558 400 446 364 457 295 350 Cytochrome P450 (AHRD V3.3 *** A0A200Q5S5_9MAGN) Solyc08g081230.1 232 151 436 185 144 125 115 128 188 152 559 141 115 189 226 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2XJN4_CAPBA) AT5G41330 Solyc08g081240.3 2482 1281 1176 1238 765 713 721 830 814 1752 1292 790 1447 1335 1011 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** B6SWF0_MAIZE) Solyc08g081250.4 4211 5648 3877 3740 5268 4596 4737 6111 6252 5212 3331 4786 5314 5307 4442 Aminopeptidase N (AHRD V3.3 *** A0A2G3ADQ3_CAPAN) Solyc08g081255.1 1 8 7 1 0 6 7 8 5 3 1 6 6 7 1 Unknown protein Solyc08g081260.1 221 199 272 244 186 244 200 190 176 157 56 180 147 260 170 Disease resistance protein (TIR-NBS class) (AHRD V3.3 *** AT4G23440.2) AT4G23440 Solyc08g081270.3 745 395 580 558 534 564 561 518 653 546 640 654 676 617 756 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200R0U5_9MAGN) AT5G41340 Solyc08g081280.3 443 1008 721 787 877 797 821 786 744 461 551 701 935 893 596 Cyclin-dependent kinase D-1 (AHRD V3.3 *** A0A1U8G5R1_CAPAN) AT1G18040 Solyc08g081290.4 372 284 299 220 251 283 298 264 297 195 232 273 342 388 311 AT-rich interactive domain-containing protein 2-like isoform X2 (AHRD V3.3 *** A0A2I4H8P9_9ROSI) AT4G11400 Solyc08g081300.4 514 381 385 323 346 382 333 374 317 323 298 310 427 346 467 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1M4T4_ARTAN) AT5G41350 Solyc08g081310.4 3321 3671 5193 4656 5842 6078 6021 4379 4343 4058 5392 5110 4034 4020 3460 Histone deacetylase complex subunit (AHRD V3.3 *-* A8MR31_ARATH) Solyc08g081320.3 4908 5309 4486 5874 6024 5995 5646 6016 4737 4934 4096 4818 5090 5479 5315 Beta-adaptin-like protein (AHRD V3.3 *** A0A2G2XJQ8_CAPBA) AT4G23460 Solyc08g081330.4 2272 1417 1493 1086 1238 1278 1131 1311 1203 1411 1145 1227 1583 1474 1319 GPN-loop GTPase (AHRD V3.3 *** A0A1U8G689_CAPAN) AT4G21800 Solyc08g081340.4 1222 1089 823 828 957 812 798 1106 1200 1008 738 1026 1390 1346 900 DNA repair helicase (AHRD V3.3 *** A0A2U1Q9X8_ARTAN) AT5G41370 Solyc08g081350.2 27 42 23 44 12 22 14 8 11 26 22 13 154 27 43 Zinc finger protein CONSTANS-LIKE 3 (AHRD V3.3 *** A0A2G3DAM4_CAPCH) AT1G63820 Solyc08g081360.3 5 29 40 110 22 48 33 41 19 13 198 23 56 21 62 PLAC8 family protein (AHRD V3.3 *** A0A2U1LM31_ARTAN) Solyc08g081370.1 2484 1826 2408 2889 2066 1916 1684 1078 1903 2791 3693 1791 1431 1522 5686 RING/U-box superfamily protein (AHRD V3.3 *** Q3EAE6_ARATH) AT3G61460 Solyc08g081380.3 435 845 481 778 1125 1208 1078 1376 882 798 566 820 570 716 531 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G3DAM3_CAPCH) AT1G63850 Solyc08g081390.4 45 76 24 35 46 61 46 52 58 36 47 57 55 22 24 Phosphoglycerate mutase-like protein AT74 (AHRD V3.3 *** A0A2G3ADV8_CAPAN) Solyc08g081400.4 123 41 29 47 9 14 10 2 20 38 25 19 66 73 73 bell-like homeodomain protein 3 AT5G41410 Solyc08g081410.3 3835 2213 1839 2349 1731 1694 1855 1895 2156 2310 2125 1957 1850 1887 2225 Golgin candidate 6 (AHRD V3.3 *** A0A2G2XK18_CAPBA) AT3G27530 Solyc08g081420.4 744 1019 969 1276 1098 1275 1336 1104 1117 1026 1017 1050 1016 1086 1193 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3C751_CEPFO) AT4G23490 Solyc08g081430.3 575 703 644 625 626 626 662 515 440 453 478 581 762 708 629 Mitochondrial import inner membrane translocase subunit Tim21 (AHRD V3.3 *** A0A200QCI4_9MAGN) AT4G00026 Solyc08g081440.2 0 0 6 4 0 0 0 1 0 0 0 0 1 1 0 Unknown protein Solyc08g081450.4 63 65 207 110 62 62 65 31 78 126 273 49 51 86 177 Nuclear transport factor 2 (NTF2) family protein (AHRD V3.3 *-* F4JYE8_ARATH) AT5G41470 Solyc08g081455.1 173 66 48 62 28 26 30 26 71 49 20 62 53 45 60 Unknown protein AT4G23493 Solyc08g081460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g081470.3 11 0 6 38 2 0 0 0 2 1 2 3 3 6 109 Protein SPIRAL1-like 5 (AHRD V3.3 *** A0A1U8F955_CAPAN) AT4G23496 Solyc08g081480.3 173 637 393 773 1039 1013 980 1019 595 404 546 482 246 342 308 Pectin lyase-like superfamily protein (AHRD V3.3 *** O81746_ARATH) AT4G23500 Solyc08g081490.4 170 220 175 140 138 163 129 148 139 176 105 154 453 221 125 mitogen-activated protein kinase 7 Solyc08g081500.3 0 0 5 4 0 0 1 0 0 1 12 6 1 0 20 LETHM1 Solyc08g081505.1 767 765 517 546 821 729 672 804 582 603 417 652 742 712 416 PB1 domain-containing protein (AHRD V3.3 *** A0A2U1PQW7_ARTAN) AT1G49920 Solyc08g081520.1 35 9 31 7 9 13 3 2 7 3 7 4 15 3 13 Plant/F1M20-13 protein (AHRD V3.3 *** A0A072TUL8_MEDTR) AT1G63930 Solyc08g081530.3 707 1193 1282 1416 1707 1865 1853 1850 1269 850 1072 1088 1541 1589 1551 monodehydroascorbate reductase AT1G63940 Solyc08g081535.1 6 22 6 15 17 20 17 24 15 5 7 17 4 13 15 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3 *** B2NIX1_CAPCH) AT4G11280 Solyc08g081550.4 247 193 201 95 40 43 27 46 106 146 448 94 107 104 304 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3 *** B2NIX1_CAPCH) Solyc08g081560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *-* A0A2G2Z7P7_CAPAN) Solyc08g081570.3 568 696 794 740 692 519 647 757 847 926 836 992 681 657 583 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (AHRD V3.3 *** A0A2G3DAU7_CAPCH) AT1G63970 Solyc08g081580.4 2793 3051 3175 3042 2968 3511 3246 2522 2372 1794 3037 2347 3696 3393 3769 D111/G-patch domain-containing protein (AHRD V3.3 *** A0A2U1M1W2_ARTAN) AT1G63980 Solyc08g081590.3 0 0 2 3 6 2 5 2 7 2 0 2 0 2 0 Meiotic recombination protein SPO11-2 (AHRD V3.3 *** A0A2G3DAR1_CAPCH) AT1G63990 Solyc08g081600.1 2 6 9 5 6 2 0 0 1 4 10 1 4 1 0 hypothetical protein (AHRD V3.3 *** AT2G16190.1) AT1G49330 Solyc08g081610.4 4 2 3 1 1 2 0 1 1 0 8 0 8 3 2 WRKY family transcription factor (AHRD V3.3 *** A0A178V2E9_ARATH) Solyc08g081620.4 252 123 304 414 1 4 0 1 112 145 188 49 81 136 119 LEU13054 endo-1,4-beta-glucanase precursor AT4G09740 Solyc08g081630.2 0 0 0 0 0 0 0 0 1 1 0 0 0 5 0 WRKY transcription factor 56 AT1G64000 Solyc08g081640.3 425 617 600 519 691 731 805 771 706 670 551 569 620 666 552 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1NKT5_ARTAN) AT4G11270 Solyc08g081650.3 150 116 116 158 180 209 208 264 256 186 187 171 132 126 202 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3DAU0_CAPCH) Solyc08g081660.2 159 75 193 142 114 108 145 89 78 96 200 90 47 93 224 Unknown protein Solyc08g081670.3 215 120 147 118 118 127 108 111 153 135 114 115 90 109 110 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2XJJ5_CAPBA) Solyc08g081680.2 25 11 0 2 2 7 0 2 8 6 12 11 1 6 17 protein LURP-one-related 17 (AHRD V3.3 *** A0A2I4FCH8_9ROSI) AT5G41590 Solyc08g081690.3 95 100 194 155 170 230 178 141 136 160 148 114 63 88 120 NADPH oxidase AT1G64060 Solyc08g081700.1 74 33 16 44 64 59 32 37 37 38 9 19 75 21 6 late embryogenesis abundant protein At1g64065-like (AHRD V3.3 *** A0A2I4FBP0_9ROSI) Solyc08g081710.3 1084 1911 2036 1912 3275 2711 3097 3304 2406 1915 1858 3656 1878 2122 849 membrane-associated kinase regulator (AHRD V3.3 *** AT1G64080.1) AT1G64080 Solyc08g081720.4 0 0 4 4 0 9 6 12 1 1 0 1 0 0 0 Cellulase (Glycosyl hydrolase family 5) protein (AHRD V3.3 *** A0A1I9LMY2_ARATH) Solyc08g081730.4 2652 2996 2168 1980 2777 2671 2222 3003 2851 2341 1626 2571 3567 2976 2252 Reticulon-like protein (AHRD V3.3 *** A0A2G3DAU6_CAPCH) Solyc08g081740.3 532 285 292 94 69 77 77 105 84 126 57 132 180 572 669 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1Q760_ARTAN) AT1G64110 Solyc08g081750.3 761 815 537 862 678 683 720 689 584 716 534 528 761 707 591 CAAX amino terminal protease family protein (AHRD V3.3 *** Q8VZ58_ARATH) AT5G60750 Solyc08g081760.3 5798 3609 3504 3090 2894 3369 3284 2773 3010 3456 3451 2655 4173 4034 4611 protein kinase family protein (AHRD V3.3 *-* AT4G12020.4) AT1G64140 Solyc08g081765.1 95 90 81 31 76 49 59 63 76 83 58 57 82 60 59 Unknown protein Solyc08g081770.3 196 295 237 263 317 336 329 303 225 261 235 420 137 253 204 GDT1-like protein 1, chloroplastic (AHRD V3.3 *** A0A1U8G499_CAPAN) AT1G64150 Solyc08g081780.1 1 26 8 9 16 3 10 12 17 6 17 8 0 6 6 Dirigent protein (AHRD V3.3 *** K4CPH4_SOLLC) AT4G23690 Solyc08g081790.3 0 4 3 6 18 11 4 7 5 11 5 3 0 6 1 Dirigent protein (AHRD V3.3 *** K4CPH5_SOLLC) AT4G23690 Solyc08g081800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** K4CPH6_SOLLC) Solyc08g081810.3 7 8 1 3 6 4 5 8 9 2 29 4 1 3 4 Cation/H(+) antiporter 17 (AHRD V3.3 *** A0A2G2XJX1_CAPBA) Solyc08g081820.4 9 12 66 34 17 27 24 14 9 5 4 18 32 33 155 Cation/H(+) antiporter 19 (AHRD V3.3 *** A0A2G2XJH4_CAPBA) Solyc08g081830.3 1039 735 765 779 1007 934 840 890 1006 734 1186 813 677 779 1223 Intracellular protein transporter USO1-like protein (AHRD V3.3 *** A0A1P8BBF8_ARATH) AT5G41620 Solyc08g081840.3 359 239 338 337 326 471 551 257 221 261 300 289 188 316 357 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A1U8EY34_CAPAN) Solyc08g081850.1 12 43 42 23 32 32 27 20 52 17 40 27 19 37 30 Transmembrane protein, putative (DUF1191) (AHRD V3.3 *** Q5S4T6_ARATH) Solyc08g081860.1 1 0 0 3 2 2 1 1 1 1 7 0 0 2 0 Unknown protein Solyc08g081870.3 4 8 0 0 0 0 1 2 2 0 2 0 4 0 0 Unknown protein Solyc08g081880.3 14 23 50 20 70 50 52 35 40 19 60 38 32 22 3 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A1U8EY34_CAPAN) Solyc08g081890.4 16 98 156 99 308 350 583 371 222 13 165 163 66 143 223 ABC transporter C family member 10 (AHRD V3.3 *** A0A1U8GDT9_CAPAN) Solyc08g081900.4 920 1330 1011 933 783 1012 881 944 1155 851 935 1106 1263 1384 1096 Translation initiation factor IF-2 (AHRD V3.3 *** A0A1J3CUF0_NOCCA) AT4G11160 Solyc08g081910.3 1913 2723 2081 2121 1855 1533 1664 1828 3105 2397 2010 2253 4022 3132 3279 V-type proton ATPase subunit E (AHRD V3.3 *** A0A2G3DAR4_CAPCH) AT1G64200 Solyc08g081920.4 748 784 825 882 764 817 860 774 803 730 801 745 1021 930 959 beta 1,3-glycosyltransferase-like protein 1 AT5G53340 Solyc08g081930.3 987 609 628 785 503 571 577 485 730 811 963 450 701 758 1190 Glucose-6-phosphate 1-epimerase (AHRD V3.3 *** A0A2G3DB64_CAPCH) AT4G23730 Solyc08g081940.3 478 1337 1413 1299 1978 2206 2422 2054 1574 1047 1201 1422 1078 1226 1088 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A2U1NUU3_ARTAN) AT4G23740 Solyc08g081945.1 29530 17094 11208 13169 8418 8137 7846 8042 7799 10852 10196 10291 14517 12874 16029 Ubiquitin conjugating enzyme (AHRD V3.3 *** B3TLN8_ELAGV) Solyc08g081960.3 489 288 227 193 182 209 163 211 282 305 190 278 289 331 203 Solanum Lycopersicum Cytokinin Response Factor 2 AT4G23750 Solyc08g081970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Arabinogalactan peptide 22 (AHRD V3.3 *** A0A2G3ADM4_CAPAN) AT5G24105 Solyc08g081980.4 70 57 64 36 109 55 58 63 72 33 71 33 53 61 34 Protein kinase family protein (AHRD V3.3 *** Q9FGG5_ARATH) AT1G64300 Solyc08g081990.3 1805 1110 848 882 624 659 752 587 859 993 793 684 713 944 1040 protein SPA1-RELATED 2-like (AHRD V3.3 *** A0A2I4DQ28_9ROSI) AT4G11110 Solyc08g082000.4 744 428 465 391 316 354 356 292 402 344 583 435 411 436 433 hypothetical protein (AHRD V3.3 *-* AT5G53220.7) Solyc08g082010.3 217 462 511 252 426 514 452 508 820 173 538 284 364 334 396 Myosin heavy chain-related protein (AHRD V3.3 *-* A0A2U1NUP5_ARTAN) AT5G41790 Solyc08g082020.3 600 603 709 764 716 644 634 642 607 645 711 600 740 694 698 Mitochondrial carrier protein (AHRD V3.3 *** A0A200PUN8_9MAGN) AT4G01100 Solyc08g082040.4 1212 971 906 697 1060 1196 1015 1155 716 837 629 763 795 922 602 Extra-large G-like protein, putative (DUF3133) (AHRD V3.3 *** A0A1P8B1E9_ARATH) Solyc08g082050.3 0 1 5 7 0 5 4 1 0 0 12 1 0 4 0 UBX domain-containing protein (AHRD V3.3 *** A0A2G3CF49_CAPCH) Solyc08g082060.3 439 514 574 595 605 663 653 632 501 468 634 452 490 530 609 Protein trichome birefringence-like 25 (AHRD V3.3 *** A0A2G3DB46_CAPCH) AT4G11090 Solyc08g082070.3 140 1150 2176 1858 3318 3549 2740 3040 1898 560 2201 1851 320 1089 1494 High mobility group B protein 6 (AHRD V3.3 *** A0A2G2XK70_CAPBA) AT4G23800 Solyc08g082080.3 1002 556 595 1225 247 323 327 363 528 739 552 321 911 664 1201 Amino acid transporter (AHRD V3.3 *** A0A200PUP0_9MAGN) AT5G41800 Solyc08g082090.1 3985 2567 2108 1232 1291 947 799 995 705 886 5854 1838 2081 1184 2646 Avr9/Cf-9 rapidly elicited protein 194 (AHRD V3.3 *** Q9FQZ4_TOBAC) AT5G41810 Solyc08g082100.3 351 418 362 396 406 365 423 363 355 311 384 441 562 473 338 WD40 repeat (AHRD V3.3 *** A0A200PUP6_9MAGN) AT1G64350 Solyc08g082110.4 244 47 120 52 3 8 9 5 48 47 189 42 40 128 71 WRKY transcription factor 54 AT4G23810 Solyc08g082120.2 698 107 675 1012 44 70 37 60 136 217 254 75 81 199 1448 Methanol inducible protein (AHRD V3.3 *** D1MAX5_NICBE) Solyc08g082130.3 17 36 43 47 13 14 12 11 30 34 71 17 7 28 124 Unknown protein Solyc08g082150.2 0 5 0 1 1 4 4 1 2 9 2 3 1 5 2 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* Q9FJ29_ARATH) Solyc08g082160.3 67 317 768 530 507 492 347 414 327 125 519 240 132 270 101 subtilisin-like serine protease 3 (AHRD V3.3 --* AT2G19170.2) Solyc08g150147.1 1 1 0 5 0 2 10 0 1 2 3 1 0 0 1 Serine-threonine protein kinase, plant-type, putative (AHRD V3.3 *** B9RCR3_RICCO) Solyc08g082170.4 789 1188 1128 1359 1467 1364 1328 1351 1197 1163 1190 1037 956 943 1152 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LXC7_ARTAN) AT4G23820 Solyc08g082180.3 723 431 273 477 216 334 236 319 296 325 313 212 399 336 551 Abscisic acid receptor PYL8 (AHRD V3.3 *** A0A2G3DB14_CAPCH) AT1G01360 Solyc08g082190.3 7040 3358 7720 8896 381 338 194 247 3231 2261 5761 1238 4983 7133 19765 Unknown protein Solyc08g082200.3 59 405 298 263 457 389 446 478 288 188 204 353 287 385 88 DNA primase (AHRD V3.3 *** A0A2G3ADK9_CAPAN) AT5G41880 Solyc08g082210.4 224 183 255 163 51 73 49 55 124 173 299 117 81 154 464 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3ADG6_CAPAN) AT1G64380 Solyc08g082230.3 104 134 123 101 144 118 153 149 177 110 104 124 198 175 115 transmembrane protein (AHRD V3.3 *-* AT1G64385.2) Solyc08g082240.1 150 209 278 282 218 278 234 232 205 175 271 196 269 350 262 transmembrane protein (AHRD V3.3 --* AT1G64385.2) Solyc08g082250.3 912 2852 2099 3779 2789 2891 2510 3378 3218 4278 2110 3056 3752 3466 4956 endo-beta-1,4-D-glucanase (Cel8) AT1G64390 Solyc08g082260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1KYU0_ARTAN) Solyc08g082270.3 264 202 216 255 286 272 324 194 158 258 198 221 182 197 313 Leucine-rich repeat (LRR) family protein (AHRD V3.3 *** A0A2U1P3Z6_ARTAN) AT4G23840 Solyc08g082280.4 1961 1512 1228 1357 1420 1382 1257 1623 1723 1699 994 1261 2068 1610 1350 Long chain acyl-CoA synthetase 2 (AHRD V3.3 *** A0A2G3DB06_CAPCH) AT4G23850 Solyc08g082290.4 574 935 779 720 685 767 857 772 653 565 731 644 1036 1037 704 Membrane insertase (AHRD V3.3 *** A0A2U1QMK8_ARTAN) Solyc08g082300.3 113 130 86 84 66 62 60 88 100 89 55 83 147 121 115 mitochondrial inner membrane protein OXA1-like (AHRD V3.3 *** A0A2I4EY87_9ROSI) AT1G44890 Solyc08g082310.3 100 68 58 133 83 54 29 47 68 98 172 88 134 101 250 RING/U-box superfamily protein (AHRD V3.3 *** F4KJ04_ARATH) Solyc08g082320.3 978 1239 1674 1342 1709 1980 1874 1381 976 968 1254 1457 1208 1544 885 PHD finger protein-like protein (AHRD V3.3 *** AT4G23860.3) AT4G23860 Solyc08g082330.3 69 34 75 80 83 89 64 58 56 37 40 34 33 50 49 Unknown protein Solyc08g082340.3 926 834 858 896 865 1023 962 858 808 863 805 901 971 919 966 glycerol-3-phosphate acyltransferase 3-like (AHRD V3.3 *** A0A2I4GCC2_9ROSI) AT5G60620 Solyc08g150148.1 410 314 375 420 333 446 521 354 316 284 351 306 321 311 422 Unknown protein Solyc08g082350.4 1 3 1 1 5 13 2 2 5 1 0 2 3 14 1 F-box protein (AHRD V3.3 *** A0A2I0VRX1_9ASPA) AT1G68960 Solyc08g082353.1 0 0 0 0 0 0 1 0 0 2 0 5 1 4 0 Unknown protein Solyc08g082357.1 5 13 14 7 2 12 7 5 6 0 21 3 3 5 13 Unknown protein Solyc08g082370.1 570 258 331 339 31 47 42 33 210 208 211 194 445 507 1346 Unknown protein Solyc08g082380.1 5 1 0 0 0 0 0 0 1 0 0 0 1 0 0 Unknown protein Solyc08g082390.3 223 377 502 392 430 447 448 336 259 293 466 331 564 381 453 hypothetical protein (AHRD V3.3 *** AT5G24165.2) AT4G23885 Solyc08g082400.1 1057 673 260 619 502 432 363 464 560 780 317 394 440 272 476 Chlororespiratory reduction31 (AHRD V3.3 *** A0A0F7GYA7_9ROSI) AT4G23890 Solyc08g082410.4 2306 1894 1315 1472 1326 1420 1433 1484 1851 1580 1523 1468 1505 2064 1841 LOW protein: zinc finger CCCH domain protein (AHRD V3.3 *-* AT5G53440.2) AT5G53440 Solyc08g082420.3 414 260 351 269 243 270 246 216 224 322 407 222 252 273 287 Pleckstrin homology (PH) domain-containing protein (AHRD V3.3 *** AT4G23895.4) Solyc08g082430.4 1163 2801 2322 2044 2670 2538 2757 2442 2312 1463 2396 1861 2871 2699 2492 Nucleoside diphosphate kinase (AHRD V3.3 *** A0A2G3DB32_CAPCH) AT4G11010 Solyc08g082440.3 848 376 311 298 81 102 89 83 326 386 397 195 355 507 866 UDP-glucose 4-epimerase (AHRD V3.3 *** Q6XZA0_SOLTU) AT4G10960 Solyc08g082450.3 319 740 782 875 877 1013 989 800 980 687 1077 1101 746 956 829 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3DB10_CAPCH) AT4G10955 Solyc08g082460.4 6 8 1 7 6 2 3 1 2 3 0 0 11 12 2 Protein kinase domain (AHRD V3.3 *-* A0A200QL53_9MAGN) Solyc08g082470.1 409 861 872 941 1684 1188 1099 1452 835 1076 687 1435 788 596 434 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9T0A8_ARATH) AT1G64450 Solyc08g082480.3 203 442 421 700 956 937 973 1135 692 492 409 665 242 449 279 Phosphatidylinositol 4-kinase gamma 2 (AHRD V3.3 *** A0A2G3ADD9_CAPAN) Solyc08g082485.1 1 1 0 0 5 0 0 1 0 5 1 0 9 0 0 F-box protein (AHRD V3.3 *-* A0A2G3DAV0_CAPCH) AT1G69090 Solyc08g082490.3 3 11 1 18 0 3 4 7 4 6 9 15 8 10 2 GDSL esterase/lipase-like (AHRD V3.3 *** A0A2Z7BHU2_9LAMI) AT4G10950 Solyc08g082500.2 5 0 1 3 7 2 4 1 0 0 0 0 0 0 0 GDSL esterase/lipase-like (AHRD V3.3 *** A0A2Z7BHU2_9LAMI) Solyc08g082510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A2G3DAV0_CAPCH) AT1G69090 Solyc08g082520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2G3DAV0_CAPCH) Solyc08g082530.4 1103 1534 1420 1222 1435 1385 1538 1454 1329 895 1052 1084 1547 1680 1433 ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A1J3D189_NOCCA) AT4G23940 Solyc08g082540.3 204 476 580 656 746 830 715 816 802 496 725 743 542 590 627 Galactose-binding domain-like protein (AHRD V3.3 *** A0A2U1P2Q8_ARTAN) AT4G23950 Solyc08g082550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A2K3P6V3_TRIPR) Solyc08g082560.3 245 175 209 161 176 192 186 172 161 190 204 148 201 190 227 F-box protein SKIP8 (AHRD V3.3 *** A0A1U8GB65_CAPAN) AT4G10925 Solyc08g082570.4 288 321 454 408 590 703 552 495 344 346 498 405 225 287 443 hypothetical protein (AHRD V3.3 *-* AT5G42070.1) AT5G42070 Solyc08g082580.3 788 1258 1055 771 1342 1252 1155 1135 1138 767 892 1136 1636 1273 858 RNA polymerase II transcriptional coactivator KELP (AHRD V3.3 *** A0A2G2XK15_CAPBA) AT4G10920 Solyc08g082590.3 3064 2791 134 1404 2059 1526 1185 1976 1349 1536 112 696 1737 117 176 Glutaredoxin (AHRD V3.3 *** A0A2U1KGP9_ARTAN) AT1G64500 Solyc08g082610.4 5388 2330 2830 1352 858 757 691 697 1578 2723 3456 1348 3390 2356 2461 DCD (Development and Cell Death) domain protein (AHRD V3.3 *** A0A2U1P2J5_ARTAN) AT5G42050 Solyc08g082620.3 154 351 377 469 500 452 469 494 545 402 344 504 667 506 346 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** O82520_CAPCH) Solyc08g082630.3 666 603 666 572 1512 1849 1895 1528 453 644 597 793 398 662 364 Auxin Response Factor 9A Solyc08g082640.2 561 331 274 530 149 204 323 130 532 637 177 765 777 838 253 Cellulose synthase (AHRD V3.3 *** A0A200QCL6_9MAGN) AT4G23990 Solyc08g082650.2 32 251 68 127 196 118 238 250 284 274 40 235 86 116 98 Cellulose synthase (AHRD V3.3 *-* A0A200QCL6_9MAGN) Solyc08g082660.2 76 376 209 377 354 446 578 328 535 400 169 471 248 292 190 Cellulose synthase (AHRD V3.3 *** A0A200QCL6_9MAGN) Solyc08g082670.4 579 722 606 929 718 802 970 824 945 1046 480 1220 690 907 570 Cellulose synthase (AHRD V3.3 *** A0A200QCL6_9MAGN) AT4G23990 Solyc08g082680.3 180 36 74 31 3 4 2 0 12 19 49 11 36 138 316 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LC40_ARTAN) AT4G24015 Solyc08g082690.2 371 595 677 613 725 775 882 696 611 490 700 600 357 547 539 Ribosomal protein S6 (AHRD V3.3 *** A0A200QWA6_9MAGN) AT1G64510 Solyc08g082695.1 250 276 388 390 342 346 352 274 264 269 284 267 360 325 335 Yos1-like protein (AHRD V3.3 *-* A0A2U1MV89_ARTAN) AT3G54085 Solyc08g082700.3 5677 4164 4588 4104 4187 3540 3816 4303 4281 4288 3541 4061 4527 4221 3806 26S proteasome non-ATPase regulatory subunit 8 (AHRD V3.3 *** B6TTI7_MAIZE) AT1G64520 Solyc08g082710.3 853 1152 1355 1438 2140 1857 1977 1846 1341 993 1200 1349 1349 1423 1075 Protein ABIL3 (AHRD V3.3 *** A0A2G2XK36_CAPBA) Solyc08g082720.4 37 58 76 95 147 163 153 135 99 71 101 98 57 153 51 DDE family endonuclease (AHRD V3.3 *-* AT4G10890.3) Solyc08g082730.4 419 230 359 210 206 231 222 214 241 247 313 258 273 231 343 DUF1664 domain-containing protein (AHRD V3.3 *** A0A1Q3B325_CEPFO) AT1G04960 Solyc08g082740.4 243 445 635 531 664 674 632 475 507 363 439 441 652 574 600 Signal recognition particle 19 kDa protein (AHRD V3.3 *** A0A2G3DAU5_CAPCH) AT1G48160 Solyc08g082750.3 2341 1602 1648 1525 1693 1849 1808 1623 1587 1712 1685 1275 1824 1507 1616 Plant regulator RWP-RK family protein (AHRD V3.3 *** G7IAL8_MEDTR) AT4G24020 Solyc08g082755.1 220 269 433 367 433 348 383 383 299 243 413 288 380 351 315 Mitochondrial pyruvate carrier (AHRD V3.3 *** A0A1U8GCA8_CAPAN) AT5G20090 Solyc08g082770.3 1 10 11 15 0 1 2 2 0 0 1 2 3 8 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVG8_SOLTU) AT4G10850 Solyc08g082780.2 0 0 0 0 0 0 0 0 0 0 6 0 0 0 1 Unknown protein Solyc08g082790.3 156 114 320 417 80 86 66 68 91 71 199 52 65 84 364 Unknown protein Solyc08g082800.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc08g082810.4 400 433 344 282 450 337 342 362 298 356 359 327 319 400 288 Beta-amylase (AHRD V3.3 *** A0A2G2XJX5_CAPBA) Solyc08g082820.4 1356 4868 2479 2079 4244 4103 3818 4859 3459 2173 2190 3925 9952 6245 3840 TOMBIPGRBC Tomato BiP (binding protein)/grp78 Solyc08g082830.3 466 650 574 583 556 553 585 783 902 658 487 557 820 696 552 Glutamine-dependent NAD(+) synthetase (AHRD V3.3 *** A0A2G3DAE2_CAPCH) AT1G55090 Solyc08g082840.3 345 266 420 333 323 364 420 300 316 325 299 328 258 379 354 N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein (AHRD V3.3 *** A0A2G3DAF0_CAPCH) AT3G45100 Solyc08g082850.3 6504 5434 5177 4534 4353 4088 4399 4569 4830 5246 3999 4224 5753 5117 5200 ABC transporter F family member 3 (AHRD V3.3 *** A0A1U8G267_CAPAN) AT1G64550 Solyc08g082860.4 54 161 154 237 251 249 261 257 241 109 104 144 234 249 223 Trehalase (AHRD V3.3 *** A0A2G3AD59_CAPAN) AT4G24040 Solyc08g082870.3 666 419 352 289 237 260 212 207 212 338 281 258 177 368 531 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A1P8B7K9_ARATH) AT4G24050 Solyc08g082880.4 2357 1330 1068 1067 736 752 856 645 1017 854 1139 917 1269 1431 1490 Methyltransferase,copper ion binding protein (AHRD V3.3 *** A0A2U1Q229_ARTAN) AT1G64600 Solyc08g082890.3 49 93 143 107 119 159 142 154 95 146 115 197 50 127 30 R2R3MYB transcription factor 9 Solyc08g082900.4 124 103 100 87 107 127 90 97 128 54 107 83 115 134 190 WD40 repeat (AHRD V3.3 *** A0A200QWB6_9MAGN) Solyc08g082910.2 174 126 158 236 248 257 264 297 177 127 233 98 204 170 271 Dof zinc finger protein (AHRD V3.3 *** A0A068PXR9_TOBAC) AT4G24060 Solyc08g082920.3 170 192 162 199 272 220 245 244 187 180 177 193 249 200 186 ORMDL-like protein (AHRD V3.3 *** A0A2U1LZK9_ARTAN) AT5G42000 Solyc08g082940.2 565 571 563 675 793 632 630 604 557 434 419 620 394 748 586 Transcription factor (AHRD V3.3 *-* A0A2G3CBE0_CAPCH) Solyc08g082950.4 0 0 3 1 8 1 6 2 2 0 0 0 1 0 0 Aluminum activated malate transporter family protein (AHRD V3.3 *** A0A2U1LM75_ARTAN) Solyc08g082960.3 104 125 126 78 117 126 138 113 86 72 105 84 132 138 81 HIT zinc finger family protein, expressed (AHRD V3.3 *** Q337A7_ORYSJ) AT5G63830 Solyc08g082970.4 871 814 580 699 924 811 743 976 884 837 678 798 902 824 565 Plant ubx domain-containing protein 10 (AHRD V3.3 *** A0A1J6IPI0_NICAT) AT4G10790 Solyc08g082980.2 982 691 946 846 789 928 893 738 828 675 820 693 861 861 1112 MAP kinase kinase kinase 67 Solyc08g082990.3 212 916 499 1087 1209 1539 1304 1327 1717 1745 913 1912 491 765 354 Oligopeptide transporter (AHRD V3.3 *** A0A200RD47_9MAGN) AT4G10770 Solyc08g083000.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein isoform X2 (AHRD V3.3 *-* XP_025885602.1) Solyc08g083010.3 164 155 179 183 174 202 215 149 262 221 207 216 160 197 181 homer protein (AHRD V3.3 *** AT4G24090.1) AT4G24090 Solyc08g083020.2 550 682 963 716 832 779 863 680 615 539 738 629 789 702 578 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LUP2_ARTAN) Solyc08g083030.4 391 550 636 574 660 618 675 623 530 413 534 471 408 696 475 zinc finger matrin-type protein (AHRD V3.3 *-* AT5G41960.1) AT5G41960 Solyc08g083040.4 1314 999 1042 1058 958 947 986 908 1150 1125 1001 850 1183 1113 1229 Serine/threonine-protein kinase fray2 (AHRD V3.3 *** A0A2G3DAG2_CAPCH) AT4G24100 Solyc08g083050.1 342 212 575 104 93 48 53 72 63 92 1296 360 252 139 407 Erythronate-4-phosphate dehydrogenase family protein (AHRD V3.3 -** AT1G19400.3) AT4G24110 Solyc08g083060.3 64 70 121 108 40 58 35 31 35 33 48 12 20 128 292 Metal-nicotianamine transporter YSL1 (AHRD V3.3 *** A0A2G3AD61_CAPAN) AT4G24120 Solyc08g083070.3 539 1191 972 976 1446 1289 1252 1566 1409 986 979 1126 1116 1228 998 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1LVR8_ARTAN) AT5G41950 Solyc08g083080.3 171 117 78 175 150 133 190 155 145 179 186 133 99 146 150 Embryogenesis-associated protein EMB8 (AHRD V3.3 *-* A0A2G2XJV7_CAPBA) Solyc08g083100.3 65 40 18 35 20 19 26 12 21 17 39 26 21 20 21 Embryogenesis-associated protein EMB8 (AHRD V3.3 *-* A0A2G3DAH9_CAPCH) Solyc08g083110.4 1926 1269 1743 1774 2570 2404 2062 2771 7004 5166 5315 5858 929 2390 2701 Methionine gamma-lyase (AHRD V3.3 *** A0A1U8G8Y5_CAPAN) AT1G64660 Solyc08g083120.3 1570 3770 3356 2845 4153 4335 4409 4500 2533 2414 2630 3254 3674 3260 2311 Ubiquitin (AHRD V3.3 *** B2W3N0_PYRTR) AT3G52590 Solyc08g083130.4 428 40 30 58 0 2 0 0 22 40 16 2 21 319 655 Homeobox-leucine zipper protein HOX6 (AHRD V3.3 *** A0A2G3DAJ5_CAPCH) Solyc08g083140.4 233 477 594 737 818 769 729 716 508 370 571 490 388 523 711 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A1Y1I3I6_KLENI) AT3G50790 Solyc08g083150.1 13 24 32 32 23 22 18 22 15 21 16 33 32 44 18 Unknown protein Solyc08g083170.1 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 056 Solyc08g150149.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc08g083190.3 329 680 375 576 504 551 443 532 503 366 367 348 557 392 355 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LI82_ARTAN) AT4G24140 Solyc08g083200.3 80 154 212 163 179 153 182 170 112 98 121 117 152 201 86 ABC transporter A family protein (AHRD V3.3 *** AT5G53650.1) AT5G53650 Solyc08g083210.3 9 74 167 335 334 414 258 414 89 107 73 370 15 327 147 endo-1,4-beta-glucanase (cel5) Solyc08g150150.1 0 0 5 0 0 0 0 1 1 1 11 0 0 0 0 Unknown protein Solyc08g083220.1 80 159 270 159 314 274 202 211 202 65 433 110 90 131 103 Branchless trichome (AHRD V3.3 *** A0A2U1NJ24_ARTAN) AT1G64690 Solyc08g083230.3 865 585 472 482 324 384 297 295 304 467 386 485 274 390 163 Growth-regulating factor 6 (AHRD V3.3 *** A0A2G3DAB8_CAPCH) AT4G24150 Solyc08g083240.3 11285 9864 11278 15572 29700 29864 33326 33707 16259 13604 19228 21302 4917 8935 6190 SUN-like protein 24 AT4G00820 Solyc08g083250.4 1299 1250 947 1114 1420 1490 1550 1444 1164 1090 1101 1055 1268 1076 1099 Purple acid phosphatase (AHRD V3.3 *** A0A2G3AD35_CAPAN) AT5G50400 Solyc08g083260.3 422 412 474 349 403 414 332 402 260 319 375 378 426 383 230 Snurportin-1 (AHRD V3.3 *** A0A1J3IQI3_NOCCA) AT4G24880 Solyc08g083270.3 181 981 750 1551 1862 1475 1575 2595 783 1416 746 2188 271 801 332 Glutaredoxin (AHRD V3.3 *** A0A200Q2N3_9MAGN) AT4G10630 Solyc08g083280.3 725 736 588 654 424 522 464 490 898 823 965 768 1012 448 518 Alcohol dehydrogenase 1 (AHRD V3.3 *** A0A1U8G0C8_CAPAN) AT1G32780 Solyc08g083285.1 1 1 0 3 0 2 0 6 0 1 0 0 2 0 1 Unknown protein Solyc08g083290.4 1196 950 687 823 895 893 911 843 1082 886 793 932 913 1009 851 PHD finger protein (AHRD V3.3 *-* A0A1J3I6U4_NOCCA) AT1G32810 Solyc08g083300.4 1721 1375 1146 1096 1163 1358 1384 1306 1257 1014 1172 1143 1191 1387 1329 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** S8CLS5_9LAMI) AT4G10570 Solyc08g083310.3 908 2714 2292 2932 2678 2648 2822 3140 3202 2220 2988 2560 1382 1731 2680 Glucan endo-1,3-beta-glucosidase 11 (AHRD V3.3 *** A0A2G3DAG4_CAPCH) AT1G32860 Solyc08g083320.4 7494 6644 4729 6694 6665 6343 6696 7424 7570 7426 4030 6982 4000 3928 3923 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** K4CPX6_SOLLC) AT1G32900 Solyc08g083330.2 3923 1888 1803 1341 1445 1727 1517 1438 1318 2127 1766 1062 1159 1007 1724 Polyketide cyclase/dehydrase and lipid transport superfamily protein (AHRD V3.3 *** Q9XIR9_ARATH) AT1G64720 Solyc08g083340.1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 Hexosyltransferase (AHRD V3.3 *-* A0A2G3DAE4_CAPCH) Solyc08g083350.4 1353 1747 1694 1724 2001 1969 2157 2098 1377 1458 1318 1700 1174 1367 1197 50S ribosomal protein L11, chloroplastic (AHRD V3.3 *** A0A2G3AD25_CAPAN) AT1G32990 Solyc08g083360.3 47 229 246 209 204 153 147 190 247 94 128 111 110 75 275 Photosynthetic NDH subcomplex B 3 (AHRD V3.3 *** A0A0F7GXX2_9ROSI) AT3G16250 Solyc08g083370.4 6 17 41 31 42 17 8 10 50 43 55 27 35 26 24 Soluble inorganic pyrophosphatase (AHRD V3.3 *** A0A2G2VH82_CAPBA) AT1G01050 Solyc08g083380.2 579 1194 1091 902 941 907 998 665 583 512 877 713 1621 1213 1096 Mitochondrial import inner membrane translocase subunit TIM13 (AHRD V3.3 *** A0A2G3AD02_CAPAN) AT1G61570 Solyc08g083385.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) ATMG00240 Solyc09g004000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g005000.1 40 26 37 29 23 15 12 5 33 41 41 14 17 35 41 Lectin receptor-like kinase (AHRD V3.3 *** G0Y6Q9_GOSHI) AT5G01550 Solyc09g005010.4 2493 2971 2414 2170 2243 2423 2446 2654 2174 1892 2073 2611 2925 2902 1985 Importin subunit beta-1 (AHRD V3.3 *** A0A2G3BM60_CAPCH) Solyc09g005020.1 0 3 0 1 0 2 0 0 1 0 6 0 1 0 4 hypothetical protein (DUF688) (AHRD V3.3 *** AT3G51760.4) AT3G51760 Solyc09g005030.3 0 1 0 4 0 0 0 0 2 0 8 2 0 1 2 Homeodomain-like superfamily protein (AHRD V3.3 *-* Q9SIZ5_ARATH) Solyc09g005035.1 0 0 0 1 0 0 3 1 1 0 0 0 0 0 0 Unknown protein Solyc09g005050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cation/H+ exchanger, Cation/H+ exchanger, CPA1 family (AHRD V3.3 *-* A0A2U1NMM5_ARTAN) Solyc09g005060.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Phosphatidylethanolamine-binding protein PEBP (AHRD V3.3 *** A0A200PX07_9MAGN) AT5G01300 Solyc09g005070.1 2 8 22 7 19 13 20 33 5 14 75 35 12 9 0 bHLH transcription factor148 Solyc09g005080.1 377 245 502 220 36 83 76 50 212 349 508 182 330 296 314 Verticillium resistance Solyc09g005090.1 566 456 331 215 9 20 17 17 188 759 346 110 1386 493 223 verticillium wilt disease resistance Solyc09g005095.1 8 6 38 6 1 0 4 0 1 10 19 1 76 11 11 Unknown protein Solyc09g005100.4 691 497 491 499 356 431 395 390 445 453 300 463 540 580 318 Transcription factor (AHRD V3.3 *** A0A2G2VYB3_CAPBA) AT5G01310 Solyc09g005110.3 4 15 17 11 26 45 40 45 16 13 11 23 4 5 6 Pyruvate decarboxylase (AHRD V3.3 *** Q8H9C6_SOLTU) AT4G33070 Solyc09g005120.3 220 133 206 111 127 142 165 93 130 82 135 146 385 160 161 DnaJ protein ERDJ3A (AHRD V3.3 *** A0A2G2VZ69_CAPBA) AT3G08970 Solyc09g005130.4 564 764 584 792 797 762 877 905 665 623 484 663 741 768 651 ARM repeat superfamily protein (AHRD V3.3 *** A0A2U1NPP8_ARTAN) AT3G08960 Solyc09g005135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g005140.2 123 142 112 110 143 156 125 140 108 79 83 134 120 190 105 hypothetical protein (AHRD V3.3 *-* AT2G30480.5) Solyc09g005143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *-* A0A1B1LUK2_VITPS) Solyc09g005147.1 1 1 5 5 3 1 1 4 3 0 14 1 0 2 0 E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *-* A0A1B1LUK2_VITPS) Solyc09g005170.3 80 36 114 46 25 27 27 14 27 49 93 33 34 43 68 Protein kinase domain (AHRD V3.3 *-* A0A200R893_9MAGN) Solyc09g005180.4 67 39 37 60 15 22 20 9 74 55 100 35 60 46 137 L-gulonolactone oxidase (AHRD V3.3 *** A0A2R6RCF4_ACTCH) AT2G46760 Solyc09g005190.3 10 0 7 8 0 0 0 0 1 0 1 0 0 9 6 Wall-associated receptor kinase-like 9 (AHRD V3.3 *-* A0A2G2VF42_CAPBA) AT1G21245 Solyc09g005200.3 49 36 61 48 7 16 14 3 36 33 36 26 46 47 83 transmembrane protein (AHRD V3.3 *-* AT5G01015.1) Solyc09g005210.4 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 Protein LURP-one-related 8 (AHRD V3.3 *** A0A2I0WR24_9ASPA) Solyc09g005220.3 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 Potassium channel (AHRD V3.3 *-* S8DA85_9LAMI) Solyc09g005230.3 194 269 382 339 412 491 504 406 346 262 338 405 232 315 215 Protein root UVB sensitive 5 (AHRD V3.3 *** A0A2G3BL77_CAPCH) AT5G01510 Solyc09g005240.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tobamovirus multiplication-like protein (AHRD V3.3 *** B6TDW9_MAIZE) Solyc09g005250.3 221 501 473 493 511 537 589 557 439 323 407 498 507 507 387 Mitochondrial carrier protein (AHRD V3.3 *** A0A200PWZ1_9MAGN) AT5G01500 Solyc09g005260.4 413 420 522 631 333 380 512 469 243 378 244 240 1163 644 339 Vacuolar cation/proton exchanger (AHRD V3.3 *** A0A2G3BK94_CAPCH) Solyc09g005270.3 501 493 592 496 648 603 512 523 432 356 635 465 471 506 598 RNA-binding CRS1 / YhbY (CRM) domain protein (AHRD V3.3 *** A0A2U1NZ44_ARTAN) AT2G28480 Solyc09g005280.3 249 255 407 392 361 360 326 336 306 291 397 331 329 370 375 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3I9M9_9ROSI) Solyc09g005290.1 65 89 121 103 119 101 104 107 100 113 117 66 110 110 130 NBS-LRR resistance protein (AHRD V3.3 *** A0A2K3MPX4_TRIPR) Solyc09g005300.3 423 396 273 332 342 270 273 248 324 201 324 304 350 421 311 mRNA cap guanine-N7 methyltransferase (AHRD V3.3 *** A0A2G3BKB8_CAPCH) AT3G20650 Solyc09g005310.3 895 1511 1709 1353 1775 1972 1876 1911 1160 1277 1329 1551 1387 1324 1095 LIMR family protein (AHRD V3.3 *** A0A1U8EDR8_CAPAN) AT5G01460 Solyc09g005320.3 14 58 116 139 206 220 235 184 71 35 138 99 46 104 91 RING/U-box superfamily protein (AHRD V3.3 *** Q0WS06_ARATH) AT5G01450 Solyc09g005330.3 1391 999 521 528 695 559 600 944 1003 920 391 842 579 842 542 HEAT repeat-containing protein (AHRD V3.3 *** A0A2U1QKL7_ARTAN) AT5G01400 Solyc09g005340.3 2469 1511 1509 1339 1100 1369 1501 1222 1071 1290 1112 1256 1221 1447 1514 HEAT repeat-containing protein (AHRD V3.3 *-* A0A2U1QKL7_ARTAN) Solyc09g005350.3 601 1001 876 831 1222 1310 1024 1253 1171 786 1029 964 1016 959 1021 DnaJ-like protein (AHRD V3.3 *** Q9SP09_TOBAC) AT3G08910 Solyc09g005360.3 342 354 565 451 415 391 400 382 411 421 376 356 487 387 436 PHD finger protein ALFIN-LIKE 1 (AHRD V3.3 *** A0A1U8EFB4_CAPAN) AT5G05610 Solyc09g005370.1 0 5 0 0 0 0 0 0 0 3 0 0 0 0 0 MYB-like transcription factor (AHRD V3.3 *-* M5BEA7_LOTJA) Solyc09g005380.2 0 0 1 0 1 1 2 0 0 0 0 0 1 6 0 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AP16_ARATH) Solyc09g005390.3 187 309 309 275 351 408 422 429 238 265 318 289 430 356 353 Thioesterase superfamily (AHRD V3.3 *** A0A200PTK8_9MAGN) AT1G04290 Solyc09g005400.3 0 2 0 26 10 1 19 12 1 2 13 1 1 2 21 MLP-like protein 43 (AHRD V3.3 *** A0A2U1KXS7_ARTAN) Solyc09g005410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kirola (AHRD V3.3 *** A0A1U8F0U0_CAPAN) Solyc09g005420.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kirola (AHRD V3.3 *** A0A2G3B0M8_CAPCH) Solyc09g005425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kirola (AHRD V3.3 *** A0A2U1MSQ9_ARTAN) Solyc09g005430.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 skin secretory protein xP2-like (AHRD V3.3 *** XP_019071199.1) Solyc09g005450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF4283 domain-containing protein/zf-CCHC_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3BLZ8_CEPFO) Solyc09g005470.3 6 9 18 19 7 13 11 4 15 10 22 10 18 11 28 UDP-glucuronic acid decarboxylase 1 (AHRD V3.3 *-* A0A2G2VZJ9_CAPBA) Solyc09g005480.3 24 20 7 11 8 19 17 17 30 30 22 14 27 34 18 F-box associated interaction domain-containing protein (AHRD V3.3 *** A0A2U1PT01_ARTAN) Solyc09g005490.1 13 14 2 14 11 24 17 22 14 20 0 8 14 26 6 Ethylene-insensitive protein 2 (AHRD V3.3 *-* A0A142IX47_NICAT) Solyc09g005500.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Kirola (AHRD V3.3 *** A0A2U1MSQ9_ARTAN) Solyc09g005510.1 48 67 18 27 55 37 38 50 36 34 35 43 49 34 23 Unknown protein Solyc09g005520.2 220 211 225 236 141 185 155 148 137 154 132 196 263 196 179 F-box associated interaction domain-containing protein (AHRD V3.3 *** A0A2U1PT01_ARTAN) Solyc09g005530.3 12 5 0 5 2 6 14 3 11 13 1 4 8 11 0 UDP-glucuronic acid decarboxylase (AHRD V3.3 *-* G5DXR5_SILLA) Solyc09g005540.3 1527 1095 1416 1601 1066 1468 1614 950 995 966 1751 1086 1235 1376 1844 UDP-glucuronic acid decarboxylase (AHRD V3.3 *-* X8JRY2_9HOMO) Solyc09g005550.3 1759 2334 3014 2323 3191 3562 3307 3288 2545 2141 2295 2668 2392 2568 2389 Calcium-dependent protein kinase (AHRD V3.3 *** E5GBE9_CUCME) AT3G51850 Solyc09g005560.4 8 0 9 4 0 0 0 0 16 0 8 2 0 6 7 Trihelix transcription factor GT-3b (AHRD V3.3 *-* A0A1U8EDU3_CAPAN) AT2G38250 Solyc09g005570.3 21 7 33 4 0 1 2 0 40 13 69 13 14 28 73 hypothetical protein (AHRD V3.3 *-* AT5G58630.1) AT5G01370 Solyc09g005580.4 896 861 690 1646 1115 602 899 824 782 1623 856 934 1145 1020 840 SelT-like protein (AHRD V3.3 *-* A0A2G3BKB5_CAPCH) Solyc09g005590.3 415 368 668 488 288 443 453 297 396 475 527 293 451 521 775 SelT-like protein (AHRD V3.3 *** A0A2G2YS79_CAPAN) Solyc09g005600.3 443 454 343 399 423 443 383 471 508 388 345 395 467 436 556 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** F4K0R0_ARATH) AT5G05570 Solyc09g005610.4 2448 1102 233 984 40 98 52 49 629 669 278 273 533 523 742 Transcription factor (AHRD V3.3 *** A0A2U1LZI0_ARTAN) AT1G09950 Solyc09g005620.4 434 405 224 464 367 330 361 399 377 458 210 321 316 285 188 Glutaredoxin (AHRD V3.3 *** A0A200PX02_9MAGN) AT2G38270 Solyc09g005630.3 1 19 19 15 12 19 25 18 17 29 17 20 14 17 25 Protein trichome birefringence-like 3 (AHRD V3.3 *** A0A1U8EDH5_CAPAN) AT5G01360 Solyc09g005640.3 281 351 254 315 237 278 217 267 287 241 186 291 491 445 311 Protein SCO1-like protein 1, mitochondrial (AHRD V3.3 *** A0A1U8EGC7_CAPAN) AT3G08950 Solyc09g005650.1 29 43 58 144 59 67 50 76 54 30 58 116 42 79 65 HAT transposon superfamily protein (AHRD V3.3 *** Q9LDK4_ARATH) AT3G13020 Solyc09g005660.4 638 325 502 568 370 311 273 303 631 508 469 598 505 645 798 HAT transposon superfamily protein (AHRD V3.3 *** Q9LDK4_ARATH) AT3G13020 Solyc09g005670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HAT transposon superfamily protein (AHRD V3.3 *** Q9LDK4_ARATH) AT3G13020 Solyc09g005690.3 28 35 13 19 23 31 17 20 20 16 17 18 28 20 29 Type I inositol polyphosphate 5-phosphatase 5 (AHRD V3.3 *-* A0A199V5W7_ANACO) AT2G37440 Solyc09g005700.3 637 867 875 784 994 863 875 1059 945 843 650 914 1038 846 579 Diaminopimelate epimerase (AHRD V3.3 *** A0A200R6G6_9MAGN) AT3G53580 Solyc09g005710.3 24 44 49 34 31 26 20 24 22 16 10 31 77 21 31 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PZG6_9MAGN) AT5G42450 Solyc09g005720.3 16619 21443 21545 15634 22163 22443 21753 19166 13390 12334 19208 15601 22634 19772 20054 60S ribosomal protein L23a (AHRD V3.3 *-* A0A2G2YLF5_CAPAN) AT2G39460 Solyc09g005730.4 2 5 0 5 0 0 1 0 2 17 40 0 9 13 40 Plant protein 1589 of Uncharacterized protein function (AHRD V3.3 *** A0A061EZD3_THECC) Solyc09g005740.3 1123 2830 1780 2225 2936 1673 1689 3192 1357 1823 1283 2251 3200 2578 1598 Protein SLOW GREEN 1, chloroplastic (AHRD V3.3 *** A0A1J3J1U9_NOCCA) AT2G37400 Solyc09g005745.1 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 LAMMER-type protein kinase AFC2 (AHRD V3.3 --* AT4G24740.9) Solyc09g005750.3 963 879 837 887 888 795 925 834 955 736 775 863 706 869 964 DUF3741 domain-containing protein/DUF4378 domain-containing protein/VARLMGL domain-containing protein (AHRD V3.3 *** A0A1Q3B3Y4_CEPFO) AT3G53540 Solyc09g005760.3 7114 4953 3251 2890 1849 2158 2292 1991 2767 2332 2464 2358 3954 4120 3560 U3 ribonucleoprotein (Utp) family protein (AHRD V3.3 *** F4JHI1_ARATH),Pfam:PF04615 AT4G02400 Solyc09g150100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g005770.1 420 425 455 314 281 364 360 309 241 311 358 304 411 409 417 F-box associated interaction domain-containing protein (AHRD V3.3 *** A0A2U1PT01_ARTAN) Solyc09g005780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g005790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT2G16190.1) Solyc09g005800.2 269 354 265 251 323 270 222 257 229 220 127 258 273 279 144 Unknown protein Solyc09g005810.4 257 387 363 338 473 485 446 458 480 369 438 399 357 306 359 UDP-glucuronic acid decarboxylase (AHRD V3.3 *** G5DXR5_SILLA) Solyc09g005820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g005830.1 3 0 0 0 0 0 0 0 4 0 22 0 0 5 5 ACI49 AT3G09520 Solyc09g005840.2 4 6 3 8 1 0 0 5 2 0 7 0 7 3 14 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A2G2YQH8_CAPAN) AT3G09520 Solyc09g005850.3 158 170 244 166 145 158 161 193 175 141 101 161 182 154 181 Pectate lyase (AHRD V3.3 *** A0A1U8E5I9_CAPAN) Solyc09g005860.3 970 636 881 451 122 185 166 137 429 685 894 303 930 557 543 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2G3BJS8_CAPCH) Solyc09g005870.1 480 469 386 808 337 353 433 338 259 419 356 304 338 443 396 Cytochrome c-type biogenesis protein CcmE (AHRD V3.3 *** A0A1J3F0T2_NOCCA) AT3G51790 Solyc09g005880.1 21 157 226 133 660 573 470 585 126 48 172 250 106 156 29 membrane-associated kinase regulator (AHRD V3.3 *** AT2G39370.1) Solyc09g005890.4 22 15 27 17 24 30 33 18 20 5 21 15 18 23 56 centrosomal protein of 135 kDa-like protein (AHRD V3.3 *-* AT2G37370.3) Solyc09g005900.2 4 3 8 4 5 5 3 2 9 3 0 1 5 16 0 centrosomal protein of 135 kDa-like protein (AHRD V3.3 *** AT2G37370.3) Solyc09g005910.4 1219 1288 1239 975 1268 1113 1291 1323 1381 1284 1141 1126 1320 1312 938 Phosphatidate phosphatase PAH1 (AHRD V3.3 *** A0A2G2VZK2_CAPBA) AT3G09560 Solyc09g005920.4 824 842 586 759 942 669 615 1055 797 1303 543 954 936 829 543 Lung seven transmembrane receptor family protein (AHRD V3.3 *** A0A2U1P555_ARTAN) AT5G18520 Solyc09g005930.4 811 897 972 796 853 776 842 867 708 694 735 788 1115 780 1008 Ribosomal protein S24e family protein (AHRD V3.3 *** AT5G02740.1) AT5G02740 Solyc09g005940.4 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A2G3BJV3_CAPCH) Solyc09g005950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pathogenesis-related protein 1 (AHRD V3.3 *** A0A1J3GAF5_NOCCA) Solyc09g005960.4 136 73 55 71 76 78 63 54 83 87 87 86 83 95 95 Valine-tRNA ligase (AHRD V3.3 *** A0A1P8BDZ7_ARATH) AT3G53490 Solyc09g005970.1 0 0 6 0 0 0 0 0 0 0 0 0 1 0 0 ABC transporter G family member (AHRD V3.3 *** A0A2K3PJ14_TRIPR) Solyc09g005980.4 4622 4751 5079 4209 4312 4379 4164 4196 4377 3964 5577 4134 5232 5331 6590 Serine/arginine-rich-splicing factor RS2Z32 (AHRD V3.3 *-* A0A0M9UMT6_NICAT) Solyc09g005990.4 42 51 37 44 38 31 20 23 27 21 15 32 40 40 60 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2K3LL89_TRIPR) Solyc09g006000.3 260 307 253 170 320 290 256 274 257 177 219 265 302 320 391 zinc/iron-chelating domain protein (AHRD V3.3 *** AT5G02710.3) AT5G02710 Solyc09g006005.1 1102 2414 1845 1414 2171 2425 2235 2582 3793 2846 2831 1971 2021 861 782 Pathogenesis-related protein 1 (AHRD V3.3 *** Q75QH2_CAPCH) Solyc09g007010.1 0 7 0 5 0 0 0 0 0 0 0 0 5 15 26 Pathogenesis-related protein 1 (AHRD V3.3 *** Q75QH2_CAPCH) AT2G14580 Solyc09g007020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Pathogenesis-related protein 1 (AHRD V3.3 *** Q75QH2_CAPCH) Solyc09g007030.3 72 51 16 52 10 1 3 0 20 16 9 14 55 58 247 Kinesin-like protein (AHRD V3.3 *** A0A2G3BJP1_CAPCH) Solyc09g007040.1 7 16 10 5 6 26 12 14 8 0 10 5 21 18 29 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2VZH6_CAPBA) AT3G53360 Solyc09g007050.1 41 44 32 51 22 19 39 52 43 41 42 32 51 49 48 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VZD9_CAPBA) AT2G37310 Solyc09g007055.1 19 19 11 43 42 45 35 38 23 7 42 20 43 56 38 Unknown protein Solyc09g007060.2 165 129 84 415 64 49 43 32 163 304 145 85 240 139 217 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1Q288_ARTAN) AT5G02750 Solyc09g007070.1 86 114 135 183 176 146 136 105 111 83 242 111 184 171 193 Complex 1 LYR protein (AHRD V3.3 *** A0A200QVT1_9MAGN) AT2G39725 Solyc09g007080.3 604 375 567 405 171 272 200 188 391 494 920 266 314 336 497 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1Q2B2_ARTAN) AT3G12620 Solyc09g007090.4 837 738 482 493 635 582 563 640 541 462 460 527 696 678 359 Protein MODIFIER OF SNC1 11 (AHRD V3.3 *** A0A2G2VZF0_CAPBA) AT5G02770 Solyc09g007100.3 422 312 360 367 248 323 269 314 430 395 410 285 319 382 394 DUF632 domain-containing protein/DUF630 domain-containing protein (AHRD V3.3 *** A0A1Q3BWV7_CEPFO) AT2G27090 Solyc09g007110.3 593 939 1684 1366 1270 1623 1584 1256 921 759 1104 974 878 924 713 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A0K9PPV4_ZOSMR) AT2G27060 Solyc09g007120.4 277 196 210 228 112 92 125 91 163 164 397 194 210 137 257 TATA box-binding protein-associated factor RNA polymerase I subunit B (AHRD V3.3 *** A0A2I4EE95_9ROSI) AT2G02955 Solyc09g007130.3 341 364 279 337 404 396 410 363 319 396 296 403 491 417 308 3-methyl-2-oxobutanoate hydroxymethyltransferase (AHRD V3.3 *** A0A1U8EKI6_CAPAN) AT2G46110 Solyc09g007140.4 85 165 383 362 237 289 205 82 230 152 585 120 70 182 281 Protein RESTRICTED TEV MOVEMENT 2 (AHRD V3.3 *-* A0A1J3D687_NOCCA) AT5G20970 Solyc09g007150.3 275 1148 576 842 883 949 782 831 2616 2395 2081 3642 1296 1605 951 Glutathione S-transferase (AHRD V3.3 *** A0A200QHH9_9MAGN) AT5G02790 Solyc09g007160.4 448 491 684 528 521 672 687 613 675 553 745 618 512 623 602 Rab-GTPase-TBC domain (AHRD V3.3 *** A0A200R6A4_9MAGN) Solyc09g007170.4 971 1100 1443 1122 1380 1813 1593 1349 1047 874 1414 1381 1194 1133 1043 Serine/threonine-protein kinase CDL1 (AHRD V3.3 *** A0A2G2VZG8_CAPBA) AT5G02800 Solyc09g007180.3 1481 2123 2081 1883 2086 2037 1926 1880 1709 1541 1930 1420 2357 2128 2080 Adenylate kinase (AHRD V3.3 *** S8CID7_9LAMI),Pfam:PF00406 AT2G37250 Solyc09g007190.3 581 425 371 419 433 441 436 319 531 425 335 412 336 276 429 Thioredoxin-like protein AAED1, chloroplastic (AHRD V3.3 *** A0A1U8E5E4_CAPAN) AT2G37240 Solyc09g007200.4 485 610 867 1039 1038 1156 1051 854 624 655 1490 697 575 633 1191 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2VZI3_CAPBA) AT5G02830 Solyc09g007210.4 5401 3246 2162 2555 2639 2126 2051 3178 2015 3347 2678 2898 2629 3053 1843 DNA topoisomerase 6 subunit A (AHRD V3.3 *** A0A2G2VZF9_CAPBA) AT5G02820 Solyc09g007220.1 106 97 101 65 30 35 31 26 41 67 38 17 119 65 133 F-box protein (AHRD V3.3 *-* A0A2G3DAV0_CAPCH) Solyc09g007230.3 1929 1923 1571 1381 1429 1397 1427 1588 1599 1406 1396 1241 2531 2034 1792 Zinc finger transcription factor 53 AT2G20280 Solyc09g007240.3 89 75 70 60 66 99 74 40 61 66 98 50 74 59 63 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase (AHRD V3.3 *** AT3G53470.2) AT3G53470 Solyc09g007250.4 5532 8496 6909 5324 7515 7671 7054 7452 5505 4661 5237 6602 9026 7563 6516 60S ribosomal protein L4 (AHRD V3.3 *** A0A2G2VZK1_CAPBA) AT3G09630 Solyc09g007260.4 288 475 1330 1179 981 1226 1156 923 1092 779 1252 1642 384 720 764 AP2-like ethylene-responsive transcription factor TOE3 (AHRD V3.3 *** A0A2G2VZG0_CAPBA) Solyc09g007270.3 239 224 177 303 160 109 110 120 241 139 190 135 222 260 369 Ascorbate peroxidase (AHRD V3.3 *** Q42941_TOBAC) AT3G09640 Solyc09g007280.4 3334 1929 1979 2158 1957 1804 1969 1754 1889 1587 2184 1829 1801 2039 2190 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A2U1Q5J5_ARTAN) AT2G37050 Solyc09g007290.4 664 602 705 543 788 814 787 732 545 479 630 712 531 515 449 Nuclear transcription factor Y subunit B-8 (AHRD V3.3 *** A0A2G3BJK6_CAPCH) AT3G53340 Solyc09g007300.3 477 384 405 437 276 414 430 411 398 392 314 342 404 465 375 Subtilisin-like protease SBT6.1 (AHRD V3.3 *** A0A2G3BJM9_CAPCH) AT5G19660 Solyc09g007310.3 1140 560 516 514 355 434 439 441 629 739 418 480 605 597 650 E3 ubiquitin-protein ligase UPL4 (AHRD V3.3 *** A0A2G2YQF0_CAPAN) AT5G02880 Solyc09g007320.4 206 333 284 388 221 178 249 216 279 327 236 265 267 378 323 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R629_9MAGN) Solyc09g007330.4 46 245 319 296 469 476 542 444 285 186 313 347 124 302 164 DNA helicase mcm8-like protein (AHRD V3.3 *** A0A2K3P3V8_TRIPR) AT3G09660 Solyc09g007340.4 277 483 628 611 908 893 896 1087 675 530 603 763 288 485 717 Tudor/PWWP/MBT superfamily protein (AHRD V3.3 *-* Q9LYZ0_ARATH) Solyc09g007350.3 1152 3435 3011 2027 2736 2800 2881 2532 1844 1510 1997 2071 3773 3163 2291 Ribosomal protein S23 (AHRD V3.3 *** A8IJQ4_CHLRE) AT5G02960 Solyc09g007360.3 431 1405 1363 1215 2263 2196 2396 2495 1846 762 1218 1532 939 1268 1062 Interactor of constitutive active ROPs (AHRD V3.3 *** A0A2K3PRJ7_TRIPR) AT2G37080 Solyc09g007370.4 560 369 376 275 301 313 293 321 253 361 264 305 320 343 320 Ribonuclease P protein subunit p29 (AHRD V3.3 *** A0A2G2WVI5_CAPBA) AT2G43190 Solyc09g007380.3 102 134 149 157 329 331 317 355 197 177 154 283 98 140 110 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9SF34_ARATH) AT3G09690 Solyc09g007390.3 297 335 382 274 307 328 343 278 256 240 406 255 409 347 416 Mitochondrial import inner membrane translocase subunit TIM14 (AHRD V3.3 *** A0A2G2YLL8_CAPAN) AT3G09700 Solyc09g007410.3 823 1344 1936 1635 1402 1641 1739 1515 1595 1093 2595 1161 1416 1310 1732 SUN-like protein 25 AT5G03040 Solyc09g007420.4 3 25 22 14 17 13 3 12 9 18 27 22 4 12 21 Glycosyltransferases (AHRD V3.3 *** K4CQD1_SOLLC) AT2G37090 Solyc09g007430.1 783 1244 770 899 965 665 728 873 747 674 711 814 1247 1374 843 Mitochondrial SBP40 (AHRD V3.3 *** Q58J68_SOLTU) AT4G20010 Solyc09g007440.3 459 422 457 306 210 256 273 234 284 202 270 277 508 486 454 DEAD-box ATP-dependent RNA helicase 57 (AHRD V3.3 *** A0A2G2YQB7_CAPAN) AT3G09720 Solyc09g007450.3 307 347 335 248 255 325 237 319 208 301 198 335 339 378 259 Lipid phosphate phosphatase gamma, chloroplastic (AHRD V3.3 *** A0A1U8E601_CAPAN) AT5G03080 Solyc09g007460.4 163 142 162 153 272 254 208 248 193 173 175 287 100 134 174 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein (AHRD V3.3 *** AT3G09730.3) AT3G09730 Solyc09g007470.2 52 186 119 159 382 348 227 252 155 98 117 228 130 211 94 Protamine P1 family protein (AHRD V3.3 *-* Q9ZQC7_ARATH) AT5G03110 Solyc09g007480.3 432 215 280 478 140 116 118 124 288 219 191 309 236 158 356 transmembrane protein (AHRD V3.3 -** AT5G03120.1) AT5G03120 Solyc09g007490.3 1200 810 974 952 753 732 649 796 885 1355 787 876 1185 940 1006 Cell number regulator 8 (AHRD V3.3 *** A0A2G2V7F8_CAPBA) AT2G37110 Solyc09g007500.3 1562 2597 3769 4223 4234 4915 5185 3320 2147 2125 3782 2738 3139 2873 3601 DNA-binding protein S1FA (AHRD V3.3 *** A0A2G2XZS4_CAPAN) AT3G09735 Solyc09g007510.3 130 177 189 244 266 250 309 326 225 135 194 248 164 219 239 Lectin receptor kinase-like protein (AHRD V3.3 *** S8CIF7_9LAMI) Solyc09g007520.3 4 6 7 17 28 18 13 14 21 16 20 12 17 7 1 Peroxidase (AHRD V3.3 *** K4CQE1_SOLLC) AT2G37130 Solyc09g007530.3 1501 671 777 941 697 672 658 599 840 1163 881 576 701 851 1278 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8AZH1_ARATH) AT2G37150 Solyc09g150101.1 52 32 74 68 33 34 26 91 77 85 21 71 51 43 35 Unknown protein Solyc09g007540.3 4302 4565 3835 3505 4341 4272 4390 4671 3844 3615 3277 3627 3765 3727 3960 Valine--tRNA ligase (AHRD V3.3 *** A0A2G2XZM1_CAPAN) AT1G14610 Solyc09g007550.3 2725 3049 2561 4912 4601 3605 3938 4161 2999 4448 3948 3408 2830 2970 2530 Protein indeterminate-domain 12 (AHRD V3.3 *** A0A2G2V7B7_CAPBA) AT5G03150 Solyc09g007560.4 493 509 667 614 537 711 568 683 626 477 645 663 371 450 833 50S ribosomal protein L5 (AHRD V3.3 *-* B6SST7_MAIZE) AT4G01310 Solyc09g007570.3 225 117 154 143 178 172 181 93 90 79 186 134 80 141 238 Transcription factor DIVARICATA (AHRD V3.3 *-* A0A1J3J4S8_NOCCA) Solyc09g007580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2I0VVC4_9ASPA) Solyc09g007590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H4 (AHRD V3.3 *-* A0A2P6TCR2_CHLSO) Solyc09g007610.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H4 (AHRD V3.3 *-* A0A1J7HQ37_LUPAN) Solyc09g007620.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1L356_ARTAN) Solyc09g007630.3 277 511 294 274 521 480 341 501 536 354 306 639 812 616 373 P58IPK AT5G03160 Solyc09g007640.4 391 364 353 315 292 294 231 380 410 327 204 304 516 430 364 Serine carboxypeptidase-like 50 (AHRD V3.3 *** A0A2G2YQA0_CAPAN) AT1G15000 Solyc09g007650.3 0 9 0 0 10 18 7 0 2 0 9 2 0 0 102 Fasciclin-like arabinogalactan protein 11 (AHRD V3.3 *** A0A2G3BJB7_CAPCH) Solyc09g007660.1 11 297 64 84 130 142 79 107 82 114 39 67 53 59 395 Fasciclin-like arabinogalactan protein 11 (AHRD V3.3 *** A0A2G3BJB8_CAPCH) Solyc09g007670.3 581 454 511 443 356 390 459 306 398 329 414 338 499 496 557 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** F4IQ11_ARATH) AT3G53390 Solyc09g007680.4 447 323 365 565 276 278 267 270 345 336 305 276 389 419 636 Zinc finger, RING-CH-type, Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *** A0A2U1LSH5_ARTAN) Solyc09g007700.3 4641 3543 5538 5815 3918 3876 4080 3060 3517 4427 4862 3849 4440 3991 6557 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1PM96_ARTAN) AT3G09770 Solyc09g007710.3 126 116 50 127 66 62 77 49 83 16 90 23 127 52 107 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3P6K1_TRIPR) Solyc09g007720.4 18 22 34 50 21 37 37 19 22 12 3 22 15 30 20 Unknown protein Solyc09g007730.4 82 58 50 89 38 64 53 56 76 40 54 90 63 60 43 Pkinase domain-containing protein (AHRD V3.3 *** A0A1Q3B9U2_CEPFO) Solyc09g007750.4 34 122 23 101 145 178 218 186 248 84 149 87 106 143 118 Serine/threonine-protein kinase-like protein CCR1 (AHRD V3.3 *** A0A2G2VZP8_CAPBA) AT3G09780 Solyc09g007760.4 379 500 220 678 685 481 437 617 762 1557 140 302 538 317 374 plasma membrane intrinsic protein 2.10 AT3G53420 Solyc09g007770.3 1573 1755 536 1882 2241 1640 1487 2122 1939 4129 356 986 1270 789 652 plasma membrane intrinsic protein 2.1 AT3G53420 Solyc09g007780.1 0 0 27 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc09g007790.1 757 266 119 144 39 47 54 31 117 430 118 124 143 245 591 Senescence regulator (AHRD V3.3 *** A0A2U1KXJ7_ARTAN) Solyc09g007800.3 123 122 126 144 151 164 155 113 109 105 122 107 172 189 173 acyl-CoA-binding domain protein (AHRD V3.3 *-* AT2G37195.2) AT2G37195 Solyc09g007810.4 1121 1077 1052 1039 1433 1413 1410 1130 1291 909 1135 1025 895 944 982 Auxin Response Factor 16A AT4G30080 Solyc09g007820.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G3BJB2_CAPCH) AT5G03250 Solyc09g007830.3 188 155 127 151 192 171 128 135 111 118 173 116 54 131 145 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** A0A1U8E671_CAPAN) AT2G28305 Solyc09g007840.3 159 63 7 13 2 0 4 3 11 8 15 9 15 25 41 Cyclic nucleotide-gated channel 15 (AHRD V3.3 *** A0A2U1M7X5_ARTAN) Solyc09g007850.3 1865 2484 3765 3862 1546 1584 1782 1590 3890 1997 3768 3417 2099 3976 3972 RNA-binding protein (AHRD V3.3 *** A0A2U1PI86_ARTAN) AT2G37220 Solyc09g007860.4 25 17 49 43 20 17 17 21 22 12 15 25 19 25 66 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A1P8BD17_ARATH) AT5G04220 Solyc09g007870.3 10066 6359 8558 8798 6159 7753 6962 5583 5843 7254 8514 6027 7363 7061 9894 ethylene signaling protein AT5G03280 Solyc09g007880.1 158 52 98 136 9 3 11 2 27 41 163 21 36 78 223 Unknown protein AT1G31335 Solyc09g007890.1 3 15 14 15 9 9 7 6 25 5 16 20 6 6 24 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G3BJ62_CAPCH) AT2G37040 Solyc09g007900.4 645 281 552 460 527 729 439 613 642 911 1364 1018 153 386 624 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G3BJ81_CAPCH) AT2G37040 Solyc09g007910.4 214 648 603 600 716 677 622 731 1607 1124 1293 1106 399 493 343 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G2YQ27_CAPAN) AT2G37040 Solyc09g007920.4 7015 4520 5497 7286 11688 12413 9748 10033 10339 14916 11507 14431 2535 5869 9662 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G3BJ81_CAPCH) AT2G37040 Solyc09g007930.2 0 0 0 0 0 3 0 0 1 0 0 0 0 0 0 Unknown protein Solyc09g007940.3 136 1874 670 880 1613 1447 1548 1884 1137 971 472 1087 1238 971 930 Adenosine kinase (AHRD V3.3 *** A0A2G2VXW7_CAPBA) AT5G03300 Solyc09g007950.3 307 268 178 353 186 211 348 429 281 608 163 356 263 395 213 transmembrane protein (AHRD V3.3 *** AT2G37035.1) AT2G37035 Solyc09g007960.1 4 1 0 0 0 0 0 0 0 2 3 0 0 3 0 Unknown protein Solyc09g007970.3 3 4 15 0 11 0 3 3 4 6 70 14 0 1 9 Small auxin up-regulated RNA68 AT2G37030 Solyc09g007980.1 60 19 19 171 0 2 4 0 10 15 3 6 28 42 158 Unknown protein Solyc09g007990.3 3059 2207 2886 2968 2911 2835 2954 2643 2045 2734 3403 2996 2475 2760 3007 Telomere repeat-binding protein 4 (AHRD V3.3 *-* A0A2I0WPS0_9ASPA) Solyc09g008000.3 252 125 180 136 65 91 84 48 131 126 114 67 111 111 79 ABC transporter G family member 24 (AHRD V3.3 *** A0A2G3BJ53_CAPCH) AT2G37010 Solyc09g008010.3 1094 488 971 343 125 114 116 93 294 565 877 201 733 636 584 Protein kinase (AHRD V3.3 *** Q9M7J5_ELYEL) AT3G09830 Solyc09g008020.4 574 286 408 431 201 213 196 175 313 293 299 228 324 413 479 Cysteine proteinases superfamily protein (AHRD V3.3 *** A0A2U1LH80_ARTAN) AT5G03330 Solyc09g008030.1 327 196 115 121 174 151 144 111 108 217 218 155 110 113 91 TCP transcription factor 19 AT2G37000 Solyc09g008040.3 572 562 457 555 514 551 514 398 709 476 527 548 534 589 420 RNA polymerase sigma factor (AHRD V3.3 *** A0A2G2VXR1_CAPBA) AT2G36990 Solyc09g008050.3 326 291 253 308 310 223 277 294 281 245 225 198 385 261 358 Glycosyltransferase (AHRD V3.3 *** A0A1Q3DDP0_CEPFO) Solyc09g008060.4 196 603 513 496 549 540 434 482 613 658 679 464 729 519 293 Glycosyltransferase (AHRD V3.3 *** A0A2I4E3P4_9ROSI) AT2G36970 Solyc09g008070.4 63 329 99 147 221 312 392 272 221 64 92 145 250 235 109 Cell division cycle protein 48-like protein (AHRD V3.3 *** A0A2G3BJ43_CAPCH) Solyc09g008080.3 92 61 56 76 23 30 22 14 101 99 212 125 48 39 77 Ubiquitin domain-containing protein (AHRD V3.3 --* A0A1Q3C6U9_CEPFO) Solyc09g008083.1 1 0 0 1 0 0 0 0 0 0 0 3 0 4 0 Glycosyltransferase (AHRD V3.3 *-* A0A1Q3B407_CEPFO) Solyc09g008087.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g008090.3 3 1 2 5 2 3 0 1 10 2 30 3 2 11 18 Glycosyltransferase (AHRD V3.3 *** A0A1Q3DDP0_CEPFO) Solyc09g008100.4 717 705 746 747 693 673 703 738 818 706 670 677 685 741 723 TSL-kinase interacting protein 1 (AHRD V3.3 *** A0A2G3BJ47_CAPCH) AT2G36960 Solyc09g008110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc09g008120.4 597 445 373 381 353 439 399 391 360 471 433 459 460 498 462 RNA helicase family protein (AHRD V3.3 *** A0A2U1N4E5_ARTAN) AT1G26370 Solyc09g008130.3 282 207 136 171 179 192 191 136 175 108 171 144 141 239 214 Phosphoglycerate kinase (AHRD V3.3 *** A0A2G2VX19_CAPBA) Solyc09g008140.3 814 1273 1258 1388 1275 1320 1231 1027 1024 1053 1081 1029 1562 1352 1369 Membrane magnesium transporter (AHRD V3.3 *** A0A1U8EHI1_CAPAN) AT5G03345 Solyc09g008145.1 2 7 5 10 2 3 12 3 5 2 27 2 2 8 6 Unknown protein Solyc09g008150.3 286 339 463 334 337 474 457 322 313 242 304 287 334 419 430 transcription initiation factor TFIID subunit 8 (AHRD V3.3 *** A0A2I4EME6_9ROSI) AT4G34340 Solyc09g008155.1 742 1091 1233 1199 1657 1436 1517 1526 1065 839 1097 1061 1179 1159 1213 actin T1-like protein (AHRD V3.3 *** AT3G09860.1) AT3G09860 Solyc09g008170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Small auxin up-regulated RNA69 Solyc09g008175.1 0 0 4 0 0 0 1 0 0 1 0 0 1 0 0 SAUR-like auxin-responsive protein family (AHRD V3.3 *** A0A2U1NT85_ARTAN) Solyc09g008180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g008190.3 114 190 123 200 163 156 168 140 93 89 87 131 135 153 245 Acylphosphatase (AHRD V3.3 *** A0A2G2YPW3_CAPAN) AT5G03370 Solyc09g008200.4 686 456 230 649 193 199 159 140 359 185 285 163 551 275 924 heavy metal-associated isoprenylated plant protein 3-like (AHRD V3.3 *-* A0A1S4B4L4_TOBAC) AT2G36950 Solyc09g008203.1 2 0 0 3 0 1 4 1 0 4 0 0 0 0 0 Glucomannan 4-beta-mannosyltransferase 9-like protein (AHRD V3.3 *** A0A2K3NWI8_TRIPR) Solyc09g008207.1 0 0 0 0 8 0 1 0 0 1 0 1 3 0 0 Unknown protein Solyc09g008210.1 1 0 6 3 2 3 1 8 2 5 4 3 6 4 18 Unknown protein Solyc09g008230.3 23351 10967 11938 9563 7019 8322 8014 5845 6192 7750 10980 7246 9306 9549 15084 zinc finger protein 593-like (AHRD V3.3 *** A0A2I4GQ86_9ROSI) AT2G36930 Solyc09g008240.3 1741 3034 2329 2536 3071 2982 2824 3277 3891 2321 2421 2210 2829 2556 2381 ABC transporter (AHRD V3.3 *** A0A200R5N4_9MAGN) AT2G36910 Solyc09g008250.4 217 288 140 352 291 246 178 207 165 171 157 170 82 141 115 blind-like1 Solyc09g008260.3 247 667 572 708 826 776 778 733 625 459 474 581 592 626 424 5'-AMP-activated protein kinase-like protein (AHRD V3.3 *-* AT5G03420.1) AT5G03420 Solyc09g008270.3 42 85 163 115 149 104 99 113 130 77 122 125 75 76 79 translation initiation factor (AHRD V3.3 *** AT2G36885.1) AT2G36885 Solyc09g008280.2 3946 25058 18552 18412 22516 21150 19619 23979 30542 17577 22649 18267 22979 21102 23369 S-adenosyl-L-methionine synthetase Z24743 AT2G36880 Solyc09g008290.4 480 472 579 389 486 549 527 519 390 395 497 440 382 465 420 Thioredoxin (AHRD V3.3 *** A0A200R5M5_9MAGN) AT3G53220 Solyc09g008300.2 20 37 28 33 11 13 14 17 21 22 33 25 53 36 23 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q941_9MAGN) Solyc09g008310.3 334 320 344 403 351 365 396 331 349 356 421 321 373 431 473 Phosphoadenosine phosphosulfate (PAPS) reductase family protein (AHRD V3.3 *** Q9LZE4_ARATH) AT5G03430 Solyc09g008320.4 227 1231 712 1595 2482 2327 2560 1987 2671 1948 597 822 1451 1094 2269 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A1U8EG04_CAPAN) AT2G36870 Solyc09g008330.3 366 277 284 282 214 296 256 265 272 244 220 232 309 319 340 Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *-* A0A2U1MK75_ARTAN) AT5G03450 Solyc09g008335.1 1363 1105 1076 1364 1061 888 918 981 1160 1709 1187 1091 1702 1340 1170 transmembrane protein (AHRD V3.3 *** AT5G03460.1) AT5G03460 Solyc09g008350.3 1316 570 643 606 269 243 305 215 533 950 650 427 641 618 983 ACT domain-containing protein (AHRD V3.3 *** A0A1Q3AQY2_CEPFO) AT2G36840 Solyc09g008360.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) (AHRD V3.3 *** Q94CC1_ARATH) Solyc09g008370.1 45 25 35 32 1 0 1 0 19 20 0 8 76 33 14 Major facilitator superfamily (AHRD V3.3 *** A0A2U1PF99_ARTAN) Solyc09g008380.3 88 850 926 867 2328 2010 1824 2444 721 334 582 1159 507 653 658 Pectate lyase (AHRD V3.3 *** A0A2G2VX49_CAPBA) AT3G53190 Solyc09g008390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 22 Solyc09g008400.3 181 301 263 309 395 356 385 364 320 237 268 218 342 339 287 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *** A0A2G2VX63_CAPBA) AT3G09880 Solyc09g008410.3 335 389 369 469 494 480 486 425 485 402 482 434 528 380 337 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A1U8E6E6_CAPAN) AT3G66654 Solyc09g008420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha carbonic anhydrase (AHRD V3.3 *** A0A200R5I4_9MAGN) Solyc09g008430.4 140 67 166 131 225 209 381 232 90 53 158 68 76 90 267 CHY zinc finger family protein, expressed (AHRD V3.3 *** Q337P2_ORYSJ) AT5G22920 Solyc09g008440.1 68 71 108 110 58 65 42 37 36 21 120 29 30 47 91 Zinc finger protein (AHRD V3.3 *** A0A200R9U1_9MAGN) AT5G03510 Solyc09g008450.3 461 653 715 540 796 801 838 698 451 419 560 588 780 663 474 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1KVX6_ARTAN) AT3G09890 Solyc09g008460.3 385 237 440 299 370 407 379 409 501 269 629 472 282 213 474 RAB GTPase (AHRD V3.3 *** A0A2U1PC99_ARTAN) AT5G03530 Solyc09g008470.4 4223 6215 6167 5704 5884 5420 5720 6574 4280 4735 5381 5613 6758 6247 4975 Splicing factor 3A subunit 2 (AHRD V3.3 *** A0A2G2VXV2_CAPBA) AT2G32600 Solyc09g008480.4 815 1173 944 1079 1242 1363 1273 1241 1260 896 869 977 1543 1167 851 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *** K4CQN6_SOLLC) AT3G09920 Solyc09g008490.4 1747 1114 1217 1008 665 841 914 728 1099 1042 1075 743 868 1209 1451 Protein SHOOT GRAVITROPISM 6 (AHRD V3.3 *** A0A2G2YPS4_CAPAN) AT2G36810 Solyc09g008500.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** K4CQN8_SOLLC) Solyc09g008505.2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 Protein LAZ1-like protein 1 (AHRD V3.3 *-* A0A1U8GE32_CAPAN) Solyc09g008507.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc09g008510.1 1 3 0 0 2 0 2 0 5 3 1 2 3 3 0 Glycosyltransferase (AHRD V3.3 *** A0A328E5E5_9ASTE) Solyc09g008520.4 1011 904 1302 1122 1029 1179 1331 1058 1180 1055 1464 1163 1105 1221 1051 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein (AHRD V3.3 *** Q8RWG0_ARATH) AT2G36720 Solyc09g008530.3 2 19 55 14 19 25 24 21 28 22 29 7 2 16 54 Purine-uracil permease NCS1 (AHRD V3.3 *** A0A2G2VXW0_CAPBA) Solyc09g008540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *-* Q0WNN6_ARATH) Solyc09g008550.4 65 174 117 157 170 190 155 216 247 167 134 211 116 168 157 NCS1 family nucleobase:cation symporter-1 (AHRD V3.3 *** A0A328X9Z8_9BURK) AT5G03555 Solyc09g008560.4 24 6 5 3 1 1 0 7 1 14 24 1 1 7 3 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4INZ9_ARATH) Solyc09g008590.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pistil-specific extensin-like protein (AHRD V3.3 *** A0A2I4E0V8_9ROSI),Pfam:PF01190 AT3G09925 Solyc09g008600.3 621 576 714 758 802 820 950 721 547 719 580 622 709 646 538 aspartic proteinase-like protein 2 (AHRD V3.3 *** A0A1U8E8Q1_CAPAN) AT2G36670 Solyc09g008610.4 2667 3383 2371 2912 2840 2717 2840 3267 3086 2956 2697 2910 3441 3074 2681 ER membrane protein complex subunit 1-like (AHRD V3.3 *** A0A2I4GFA7_9ROSI) AT5G11560 Solyc09g008620.3 3 7 17 11 16 39 31 35 28 9 8 25 17 23 2 Polyadenylate-binding protein (AHRD V3.3 *** A0A2G3BIQ3_CAPCH) AT2G36660 Solyc09g008630.3 38 172 277 192 265 252 281 263 165 131 216 191 174 231 98 DNA replication complex GINS protein PSF1 (AHRD V3.3 *** A0A2U1MY59_ARTAN) AT1G80190 Solyc09g008640.1 39 77 144 220 165 165 171 137 102 65 90 72 71 151 289 Protein kinase domain (AHRD V3.3 *** A0A200R5B8_9MAGN) Solyc09g008650.3 119 162 154 232 259 289 296 263 169 139 224 154 90 111 234 Peptidylprolyl isomerase (AHRD V3.3 *** A0A1U8E6I5_CAPAN) AT3G10060 Solyc09g008660.3 23 15 67 34 33 4 19 15 18 28 77 14 18 18 72 Protein CHUP1, chloroplastic (AHRD V3.3 *** A0A1J3EEE6_NOCCA) AT2G36650 Solyc09g008670.3 3 18 10 50 84 112 95 131 28674 2407 4736 6092 4 275 5 threonine deaminase Solyc09g008680.4 81 79 88 79 55 82 70 81 67 84 73 81 126 99 92 FAD-binding protein (AHRD V3.3 *** AT3G49645.2) AT3G49645 Solyc09g008690.3 0 0 5 0 0 0 0 1 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2VXX2_CAPBA) Solyc09g008700.2 1464 644 511 595 390 394 481 412 622 782 609 538 504 589 817 E3 ubiquitin-protein ligase UPL7 (AHRD V3.3 *** A0A2G2YPP3_CAPAN) AT3G53090 Solyc09g008710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exostosin family protein (AHRD V3.3 *-* A0A2U1Q8V5_ARTAN) Solyc09g008720.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Exostosin family protein (AHRD V3.3 *** A0A2U1KQ90_ARTAN) Solyc09g008730.3 451 468 409 390 450 434 431 464 398 359 345 500 410 433 385 GTP-binding protein (AHRD V3.3 *** A0A2G2YPQ8_CAPAN) AT2G22870 Solyc09g008740.1 7 5 4 12 0 0 0 0 1 13 0 1 2 1 13 VQ motif-containing protein 29 (AHRD V3.3 *** A0A2G2VXX9_CAPBA) Solyc09g008750.1 20 30 16 11 0 0 0 0 5 10 8 0 18 13 4 VQ motif-containing protein 29 (AHRD V3.3 *** A0A2G2VXX9_CAPBA) Solyc09g008760.1 54 38 17 62 0 0 0 0 8 26 13 0 29 29 32 VQ motif-containing protein 29 (AHRD V3.3 *** A0A2G3BIN0_CAPCH) Solyc09g008770.3 1527 247 64 68 21 17 9 9 170 912 116 179 76 168 630 Late embryogenesis abundant protein (AHRD V3.3 *** A0A200R5C6_9MAGN) AT2G36640 Solyc09g008780.4 632 1348 578 1025 776 936 1098 735 804 1463 1055 802 2473 847 772 Sulfite exporter TauE/SafE family protein (AHRD V3.3 *** A0A2U1KFX4_ARTAN) AT2G36630 Solyc09g008790.4 585 448 251 409 260 365 380 343 313 422 198 251 316 332 476 SRSF protein kinase 1 (AHRD V3.3 *** A0A1U8EHQ6_CAPAN) Solyc09g008800.3 4287 7138 6060 4339 5926 5879 4971 5319 4944 3391 5504 4929 8543 6590 6604 60S ribosomal protein l24-like (AHRD V3.3 *** A0A2K3LB43_TRIPR) AT3G53020 Solyc09g008810.3 11 55 60 74 63 82 43 50 80 22 70 64 12 88 33 homeobox-leucine zipper protein ATHB-22 (AHRD V3.3 *** A0A2I4FX25_9ROSI) AT5G03790 Solyc09g008820.3 763 387 312 393 265 291 228 253 362 466 559 449 412 406 431 F-box protein PP2-A15 (AHRD V3.3 *** A0A1U8E6K0_CAPAN) AT3G53000 Solyc09g008830.3 270 263 1013 212 402 381 393 365 330 284 544 385 411 408 274 Sequence-specific DNA binding transcription factor (AHRD V3.3 *** A0A2U1LFW8_ARTAN) Solyc09g008840.4 53 405 123 225 636 567 546 793 333 235 212 440 407 340 171 Pyruvate kinase (AHRD V3.3 *** A0A2G3BIP6_CAPCH) Solyc09g008850.3 903 532 421 430 365 354 431 476 455 611 425 488 461 432 421 Uridylate kinase (AHRD V3.3 *** A0A2G2YPJ3_CAPAN) AT3G10030 Solyc09g008860.4 194 1610 1402 1523 3087 2717 2594 3303 1633 1098 1057 1669 1018 1117 1574 leucine-rich repeat receptor-like protein kinase PXC1 (AHRD V3.3 *** A0A1S4B9J1_TOBAC) AT2G36570 Solyc09g098620.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1PRB3_ARTAN) AT3G52970 Solyc09g008913.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** Q8H0I8_PETHY) Solyc09g008910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** Q8H0I8_PETHY) Solyc09g008920.3 1166 1316 1441 1322 1349 1325 1269 1377 1591 1238 1336 1213 1171 1218 1558 Geranylgeranyl pyrophosphate synthase (AHRD V3.3 *** Q8LAW5_ARATH) AT4G38460 Solyc09g008930.4 647 510 510 489 565 627 578 580 571 500 483 528 362 387 500 DUF668 domain-containing protein/DUF3475 domain-containing protein (AHRD V3.3 *** A0A1Q3CD25_CEPFO) Solyc09g008940.4 2469 2014 1901 1739 1555 1863 1548 1747 1503 1433 1604 1905 1732 1992 1302 AT-hook motif nuclear-localized protein 10 (AHRD V3.3 *** A0A2G2VY12_CAPBA) Solyc09g008950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** Q9SJQ4_ARATH) AT2G36540 Solyc09g008960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** Q9SJQ4_ARATH) AT2G36540 Solyc09g008970.1 97 60 101 66 169 151 128 143 93 33 82 93 67 80 47 plant/protein (AHRD V3.3 *** AT3G10020.1) AT3G10020 Solyc09g008980.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 plant/protein (AHRD V3.3 *** AT3G10020.1) Solyc09g009000.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009010.4 228 649 526 926 851 931 863 823 468 603 584 674 547 433 378 Glucomannan 4-beta-mannosyltransferase 2 (AHRD V3.3 *** A0A2G2YPQ3_CAPAN) Solyc09g009020.3 2283 6129 4630 5677 6736 5648 5982 7516 6360 4790 4041 5541 7563 7424 6023 enolase AT2G36530 Solyc09g009030.4 6514 7158 5919 4552 5176 4784 4550 4939 4074 3867 4368 4861 7459 6818 5646 Histone deacetylase HDT1 (AHRD V3.3 *** HDT1_SOLCH) AT3G44750 Solyc09g009040.3 467 1390 939 1224 1375 1429 1423 1277 1821 1769 1993 2553 1499 1548 1542 Delta(14)-sterol reductase (AHRD V3.3 *** A0A2G2VX21_CAPBA) AT3G52940 Solyc09g009060.1 3 7 3 1 7 9 4 11 17 18 6 19 0 7 0 Unknown protein Solyc09g009080.4 4455 3638 4719 4289 3945 4220 4120 4494 7307 6015 6975 4901 3487 4618 3743 DNA demethylase1 AT5G04560 Solyc09g009090.3 1340 1086 1267 1365 1263 1362 1356 1189 1244 1230 1410 1141 1617 1300 1114 CTR1-like protein kinase-3 AT5G03730 Solyc09g009100.4 2419 1054 1243 1263 914 1081 1317 864 1354 1138 1064 1201 983 1180 882 Heat stress transcription factor A3 (AHRD V3.3 *** Q9LLF2_SOLPE) AT5G03720 Solyc09g009105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A1P8B5N0_ARATH) AT4G25420 Solyc09g009120.4 2381 1948 1203 1816 1344 1518 1533 1631 1497 1467 1301 1423 1836 1924 1544 Polyadenylation and cleavage factor-like protein 4 (AHRD V3.3 *-* A0A1J3JME1_NOCCA) AT2G36480 Solyc09g009140.3 493 661 667 691 679 706 683 644 547 503 669 590 564 594 457 Gamma-tubulin complex component (AHRD V3.3 *** A0A2G3BIR4_CAPCH) AT5G06680 Solyc09g009150.1 22 105 26 58 22 16 16 16 51 55 36 59 91 52 96 S-locus lectin protein kinase family protein (AHRD V3.3 *-* A0A2U1LPS2_ARTAN) AT5G03700 Solyc09g009160.3 49 52 56 48 75 63 31 48 89 70 138 82 63 68 167 Unknown protein Solyc09g009170.4 389 407 470 390 463 444 444 414 657 417 571 448 525 439 651 ACI14 AT3G09970 Solyc09g009173.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g150102.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009177.1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009180.3 1944 1705 1347 1152 1305 1199 1212 1496 1585 1575 1022 1469 1677 1716 1574 DnaJ protein ERDJ2A (AHRD V3.3 *** A0A2G2YPM4_CAPAN) AT1G79940 Solyc09g009190.4 883 1190 985 1277 1001 790 912 948 1466 810 930 1206 1103 1518 1783 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic (AHRD V3.3 *** A0A2G2VX17_CAPBA) AT2G36390 Solyc09g009200.3 385 442 526 401 384 367 318 393 606 224 274 460 468 545 322 Growth-regulating factor 3 (AHRD V3.3 *** A0A2G3BIU0_CAPCH) AT2G36400 Solyc09g009210.4 1445 1618 2548 1668 2565 2784 2563 1852 1698 923 2206 1762 1843 1652 1878 Transcriptional activator (DUF662) (AHRD V3.3 *** Q3EBM1_ARATH) AT3G09980 Solyc09g009220.4 494 790 1198 998 1365 1254 1077 1224 993 805 942 1182 1062 883 870 histone-lysine N-methyltransferase SETD1B-like protein (AHRD V3.3 *** AT5G03670.1) AT5G03670 Solyc09g009230.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein, putative (DUF247) (AHRD V3.3 *** Q9SJR2_ARATH) AT2G36430 Solyc09g009240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2VWY7_CAPBA) AT2G36450 Solyc09g009250.3 154 173 165 242 283 240 241 239 198 289 239 220 280 211 370 Trihelix transcription factor GTL1 (AHRD V3.3 *** A0A2G2VWZ1_CAPBA) AT5G03680 Solyc09g009260.3 3212 5945 4162 4387 4788 3825 4084 4991 5307 5024 3453 4143 7455 5370 4355 fructose-1,6-bisphosphate aldolase AT2G36460 Solyc09g009270.2 241 315 336 257 299 264 267 342 296 288 194 284 267 255 272 Protein ELC (AHRD V3.3 *** A0A2G2YLT3_CAPAN) AT3G12400 Solyc09g009280.1 13 6 8 5 4 9 8 3 7 12 9 4 9 11 3 Fructose-bisphosphate aldolase (AHRD V3.3 *-* A0A2G3BIS8_CAPCH) Solyc09g009290.3 283 222 351 250 240 231 237 160 243 158 257 248 323 347 340 Ankyrin repeat (AHRD V3.3 *** A0A200R0L6_9MAGN) AT5G40160 Solyc09g009300.4 264 442 453 347 493 447 417 385 421 272 456 399 406 399 495 Protein BUD31-like protein (AHRD V3.3 *** A0A1U8FDQ1_CAPAN) AT4G21110 Solyc09g009340.3 698 574 337 413 414 436 414 484 414 390 356 479 513 591 490 Unknown protein Solyc09g009350.2 25 26 17 20 62 56 47 64 86 43 38 30 26 73 73 Calcium-dependent lipid-binding family protein (AHRD V3.3 *-* A0A1P8AMQ8_ARATH) Solyc09g009360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 7 (AHRD V3.3 *** A0A290WKY4_SOLLC) Solyc09g009370.4 1881 2002 2043 2184 1976 2205 2228 1900 2677 2134 1907 2176 1698 2162 2319 Calcium-dependent lipid-binding family protein (AHRD V3.3 *-* A0A1P8AMQ8_ARATH) AT1G48090 Solyc09g009380.3 328 676 780 824 1072 1257 1238 1235 1101 786 1002 1167 585 777 656 Protein kinase G11A (AHRD V3.3 *** A0A1U8F337_CAPAN) AT2G36350 Solyc09g009390.3 1518 2286 1883 1616 2538 2122 2087 2866 2842 3035 1999 2242 3432 2405 1839 Monodehydroascorbate reductase (AHRD V3.3 *** A0A2G2VWV8_CAPBA) AT3G52880 Solyc09g009400.4 146 174 102 144 158 133 143 146 160 85 190 117 300 228 182 APO domain (AHRD V3.3 *** A0A200QVA6_9MAGN) Solyc09g009410.3 4 15 15 13 10 23 26 17 13 4 16 6 1 6 1 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A1P8B6P4_ARATH) Solyc09g009420.1 360 353 157 369 990 904 728 796 277 361 224 243 182 65 184 hypothetical protein (AHRD V3.3 *-* AT3G52740.1) AT3G44450 Solyc09g009430.3 505 507 598 609 450 369 476 506 809 504 584 658 567 631 789 Cell division protein FtsZ (AHRD V3.3 *** A0A1U8EHX5_CAPAN) AT2G36250 Solyc09g009440.3 66 56 42 44 64 46 54 44 66 76 65 37 67 75 50 Iron-sulfur assembly protein IscA-like 1, mitochondrial (AHRD V3.3 *** A0A2G2YPA5_CAPAN) Solyc09g009450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb/SANT-like DNA-binding domain protein (AHRD V3.3 --* AT2G24960.2) Solyc09g009460.4 373 228 277 228 192 229 245 172 190 170 331 197 221 216 312 Iron-sulfur assembly protein IscA-like 1, mitochondrial (AHRD V3.3 *-* A0A2G2YPA5_CAPAN) Solyc09g009470.1 200 167 143 165 269 253 249 244 150 165 201 130 186 172 207 F-box/LRR-repeat protein (AHRD V3.3 *** A0A2G2VWV1_CAPBA) AT1G67190 Solyc09g009480.1 3 7 12 4 16 6 7 5 10 5 25 8 6 5 15 F-box protein (AHRD V3.3 *** A0A2K3LAB0_TRIPR) Solyc09g009490.4 687 197 38 70 1 9 5 3 64 180 45 52 133 142 142 ABSCISIC ACID-INSENSITIVE 5-like protein 4 (AHRD V3.3 *** A0A2G2YPC0_CAPAN) AT2G36270 Solyc09g009500.3 394 641 503 551 800 780 727 844 622 507 611 658 722 692 686 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1QP59_ARTAN) AT3G48410 Solyc09g009510.4 260 504 358 363 428 431 395 525 432 327 318 381 471 381 395 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1QP59_ARTAN) AT2G36290 Solyc09g009520.3 4 6 2 5 0 0 1 6 2 1 11 3 7 14 7 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9SJM9_ARATH) AT2G36290 Solyc09g009530.4 325 603 316 466 581 461 527 501 729 514 364 538 552 475 592 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9SJM9_ARATH) Solyc09g009540.4 302 231 167 232 479 534 567 538 258 243 295 321 334 215 92 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1QP59_ARTAN) AT3G48410 Solyc09g009550.4 18 37 69 123 30 45 25 36 80 43 63 27 62 47 59 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1QP59_ARTAN) AT3G48410 Solyc09g009560.2 205 93 111 110 7 18 9 5 101 123 82 16 53 121 35 Terminal flower 1 (AHRD V3.3 *** A0A2Z4I2Q4_CITLI) AT5G03840 Solyc09g009565.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Fatty acyl-CoA reductase (AHRD V3.3 *-* A0A2G2ZAH5_CAPAN) Solyc09g009570.3 3 9 0 0 0 0 0 0 0 1 0 0 0 0 0 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A2G2YPA8_CAPAN) Solyc09g009580.4 44 86 77 166 196 153 92 110 44 71 60 126 44 165 170 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A2G2YPA8_CAPAN) Solyc09g009583.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009587.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009590.1 58 17 21 16 1 2 7 1 11 15 14 2 8 18 32 Zinc finger A20 and AN1 domain stress-associated protein (AHRD V3.3 *** A0A2K3KXY3_TRIPR) Solyc09g009600.3 0 7 0 2 7 6 7 0 3 2 9 11 5 5 7 Purple acid phosphatase (AHRD V3.3 *** A0A218XCV9_PUNGR) AT3G52820 Solyc09g009610.3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Purple acid phosphatase (AHRD V3.3 *** A0A2G3BIG2_CAPCH) AT3G52780 Solyc09g009620.1 49 96 101 72 136 128 84 128 62 49 77 100 75 137 33 protein LITTLE ZIPPER 3 (AHRD V3.3 *** XP_010325915.1) AT3G52770 Solyc09g009630.3 178 177 136 194 209 182 183 162 188 158 95 129 157 149 101 CAAX prenyl protease 2 (AHRD V3.3 *** A0A2G2VWT5_CAPBA) AT2G36305 Solyc09g009640.3 2392 2061 2548 2305 2657 2791 2540 2058 1437 1769 2408 1967 2048 1949 2102 Small nuclear ribonucleoprotein G (AHRD V3.3 *** M3A3X0_PSEFD) AT2G03870 Solyc09g009650.3 663 593 753 805 551 651 593 425 317 466 506 474 691 593 550 Unknown protein Solyc09g009660.3 62 90 102 100 161 133 136 136 79 83 74 79 90 59 49 Solute carrier family 35 protein (DUF914) (AHRD V3.3 *** A0A1I9LLD6_ARATH) Solyc09g009670.3 3 3 22 21 12 14 13 5 15 3 2 8 8 3 28 Solute carrier family 35 protein (DUF914) (AHRD V3.3 *** A0A1I9LLD6_ARATH) Solyc09g009680.2 2118 2155 1404 2232 1954 1526 1786 2456 1771 2345 1580 2140 2252 1795 1179 Transcription initiation factor TFIID subunit 12 (AHRD V3.3 *** A0A2G2YPC4_CAPAN) AT3G10070 Solyc09g009690.3 1176 537 425 413 591 442 483 471 375 1189 817 404 374 485 494 Inosine/uridine-preferring nucleoside hydrolase domain-containing protein (AHRD V3.3 *** A0A2U1L4C1_ARTAN) AT2G36310 Solyc09g009700.4 812 2629 1612 1881 4273 3272 2852 4246 2246 1625 1188 2631 2096 1547 989 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2VWT1_CAPBA) AT5G03610 Solyc09g009703.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200Q6A4_9MAGN) AT2G27690 Solyc09g009707.1 0 2 1 0 4 1 2 3 0 2 1 1 2 0 12 Cytochrome P450 (AHRD V3.3 *** A0A200Q6A4_9MAGN) AT2G27690 Solyc09g009710.4 271 469 512 580 660 646 730 664 634 398 446 577 453 507 513 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT1G19485.2) AT1G19485 Solyc09g009720.2 474 573 527 505 490 527 461 444 391 372 388 359 641 460 587 Ubiquitin conjugating enzyme (AHRD V3.3 *** A0A172MJZ4_PAESU) Solyc09g009725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 defensin-like protein 308 (AHRD V3.3 -** XP_006398382.1) Solyc09g009730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009731.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009732.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009733.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009734.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009736.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009738.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g009750.3 0 1 2 1 2 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** O82440_ARATH) AT5G03620 Solyc09g009760.1 384 176 165 182 150 209 162 121 174 254 303 312 141 275 501 Basic-leucine zipper domain (AHRD V3.3 *-* A0A200Q667_9MAGN) AT1G19490 Solyc09g009770.3 6557 3944 4281 4128 3191 3377 3556 2850 3207 4333 5005 2589 6290 4206 4805 Calmodulin-binding family protein, putative, expressed (AHRD V3.3 *** Q2QXN6_ORYSJ) AT3G52870 Solyc09g009780.4 197 200 345 257 242 291 262 189 252 199 279 265 344 307 313 Glucosamine 6-phosphate N-acetyltransferase (AHRD V3.3 *** A0A2G3BIH9_CAPCH) AT5G15770 Solyc09g009790.4 73 73 69 75 70 76 81 61 69 63 43 81 65 79 91 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R3D4_9MAGN) AT3G08820 Solyc09g009800.3 998 646 557 548 546 572 519 574 747 663 387 609 508 696 553 B-block binding subunit of TFIIIC (AHRD V3.3 *** A0A200QSD6_9MAGN) AT1G17450 Solyc09g009810.1 17 3 31 68 12 6 2 0 18 9 58 1 1 41 69 hypothetical protein (AHRD V3.3 *** AT3G10120.1) AT5G03890 Solyc09g009820.4 485 461 467 459 423 388 464 447 386 494 493 500 509 402 439 Thioredoxin family protein (AHRD V3.3 *** Q940I2_ARATH) AT5G03880 Solyc09g009830.3 477 721 550 1576 601 607 373 510 347 385 312 227 542 319 564 Alpha carbonic anhydrase (AHRD V3.3 *** A0A200QHP1_9MAGN) AT3G52720 Solyc09g009840.1 339 274 262 183 54 65 65 61 215 127 274 93 595 374 247 hypothetical protein (AHRD V3.3 *** AT2G36220.1) AT2G36220 Solyc09g009850.4 2110 1293 1014 1066 846 889 852 818 807 1115 989 818 1193 1183 1132 mediator-associated protein 2-like (AHRD V3.3 *** A0A1U8E6W4_CAPAN) AT5G64680 Solyc09g009860.1 32 231 229 297 483 541 470 599 221 122 138 332 36 171 131 Glutaredoxin (AHRD V3.3 *** A0A200Q6F4_9MAGN) AT5G03870 Solyc09g009880.3 1052 819 729 904 743 639 766 704 897 956 584 731 851 759 630 F-box-like domain-containing protein (AHRD V3.3 *** A0A1Q3BFU9_CEPFO) AT1G57790 Solyc09g009890.4 1980 1881 2196 1833 1518 1507 1680 1664 1971 1465 2088 1858 1869 2608 2171 heterogeneous nuclear ribonucleoprotein R isoform X1 (AHRD V3.3 *** A0A2I4DTZ7_9ROSI) AT3G52660 Solyc09g009895.1 35 44 44 50 26 24 54 31 46 27 24 43 12 37 18 Unknown protein Solyc09g009900.4 34 309 557 396 454 523 509 507 314 168 411 354 210 465 181 Unknown protein Solyc09g009910.4 425 247 221 176 165 166 169 219 210 310 91 159 183 203 140 ABC transporter ATP-binding protein (AHRD V3.3 *** A0A2T6DFU9_9BACT) AT5G03910 Solyc09g009920.1 266 211 238 287 207 215 163 214 180 234 184 247 183 246 145 F-box domain (AHRD V3.3 *** A0A200QKR6_9MAGN) AT5G56420 Solyc09g009930.2 0 0 0 0 1 0 0 2 0 0 0 0 0 0 1 Unknown protein AT3G52620 Solyc09g009940.3 1703 1116 1162 891 1312 1323 1369 1388 1451 1240 1124 1246 698 1058 1556 Signal recognition particle protein (AHRD V3.3 *** A0A1U8EGH6_CAPAN) AT5G03940 Solyc09g009950.4 130 138 97 137 122 148 144 139 92 86 107 126 136 147 121 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q6D9_9MAGN) AT3G11460 Solyc09g009960.3 153 139 123 150 142 126 147 101 145 122 200 157 147 132 206 4'-phosphopantetheinyl transferase family protein (AHRD V3.3 *** A0A2K3N093_TRIPR) AT3G11470 Solyc09g009970.3 260 488 519 456 584 621 579 593 529 380 500 528 378 459 458 Rho GTPase-activating protein 1 (AHRD V3.3 *** A0A2G2VWR1_CAPBA) Solyc09g009980.3 3 3 0 4 0 0 4 0 5 1 3 0 4 4 0 Small auxin up-regulated RNA70 AT2G36210 Solyc09g009990.4 2421 1796 1311 2024 2028 1742 2031 2417 1531 2695 1669 1966 1390 1467 1437 GATA zinc finger protein (AHRD V3.3 *** AT3G52610.1) AT3G52610 Solyc09g010000.4 259 99 16 30 0 0 0 0 12 6 15 0 36 65 11 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) AT1G06620 Solyc09g010010.1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1NTU8_ARTAN) Solyc09g010020.2 272 149 176 111 8 5 6 7 56 78 106 12 114 122 67 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) AT1G04350 Solyc09g010030.3 1248 1491 1403 1053 1370 1234 1118 1178 1110 1206 1242 1360 1605 1410 1050 50S ribosomal protein L7/L12 (AHRD V3.3 *** A0A2G2UXP0_CAPBA) AT3G06040 Solyc09g010040.3 39 14 22 23 8 4 13 1 9 14 20 6 7 18 5 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) AT1G06620 Solyc09g010050.1 13 11 3 6 21 14 0 15 7 5 19 3 23 11 9 Cullin (AHRD V3.3 *** A0A2U1Q0J3_ARTAN) Solyc09g010060.3 207 933 926 1073 1670 1718 1664 1943 1033 643 857 1393 368 866 534 Kinesin-related protein (AHRD V3.3 *** A0A2U1L7Z9_ARTAN) AT2G36200 Solyc09g010070.1 17 21 3 12 31 24 27 20 19 12 5 12 41 26 12 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QHM2_9MAGN) Solyc09g010080.3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 invertase 5 AT3G52600 Solyc09g010090.5.1 10 52 76 24 80 66 52 94 34 26 45 13 14 32 26 invertase 7 AT3G52600 Solyc09g010100.3 4911 7543 8793 6709 7651 8053 8079 6573 4728 4336 6516 5765 7324 6912 6542 Ribosomal protein S11 (AHRD V3.3 *** A0A200Q0S8_9MAGN) AT3G11510 Solyc09g010110.3 410 345 277 319 238 259 276 276 360 280 171 292 279 310 307 Chaperone protein dnaJ-related protein (AHRD V3.3 *** A0A2U1LP52_ARTAN) AT5G06130 Solyc09g010120.2 254 267 256 288 268 267 284 270 313 336 247 258 283 271 353 hypothetical protein (AHRD V3.3 *** AT2G36145.1) AT2G36145 Solyc09g010130.4 820 851 976 844 787 870 872 771 1043 937 1001 844 1129 1008 926 Sorting nexin 1-like protein (AHRD V3.3 *** A0A0K0XR75_TOBAC) AT5G06140 Solyc09g010140.3 230 221 220 310 293 293 288 261 257 225 227 258 205 227 392 Senescence regulator (AHRD V3.3 *** A0A2U1NM20_ARTAN) AT3G15040 Solyc09g010150.4 388 346 253 312 251 217 242 241 262 269 184 241 305 348 309 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PYP4_ARTAN) AT5G04070 Solyc09g010160.3 15 24 12 19 3 2 2 2 4 5 8 0 8 7 0 NAC domain-containing protein 90 (AHRD V3.3 *** A0A2G2YPI7_CAPAN) Solyc09g010170.3 270 215 232 237 243 208 181 186 180 236 219 160 273 240 251 Vacuolar protein sorting-associated protein 55-like protein (AHRD V3.3 *** A0A1U8E714_CAPAN) AT3G11530 Solyc09g010180.3 3994 3510 3152 3066 3098 3181 3298 3409 3213 3203 2676 3421 3091 3587 3321 SPINDLY AT3G11540 Solyc09g010190.3 864 893 1019 920 1040 961 1113 933 843 663 949 887 1224 1096 861 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2G2YPV4_CAPAN) AT2G36130 Solyc09g010200.4 0 1 4 1 0 1 0 1 4 0 1 3 0 0 0 Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_TOBAC) AT3G11550 Solyc09g010210.3 683 1668 1713 3603 7760 7328 6786 8055 2209 2634 1735 4599 1320 2257 2186 endo-1,4-beta-glucanase precursor (Cel2) AT1G70710 Solyc09g010220.4 72 133 109 84 103 121 87 126 72 116 88 153 122 106 48 lysosomal Pro-X carboxypeptidase (AHRD V3.3 *** A0A2I4EKY3_9ROSI) Solyc09g010230.2 180 108 59 15 25 36 22 28 48 129 40 41 48 43 45 B3 domain-containing protein (AHRD V3.3 *** A0A2G2VWZ0_CAPBA) AT3G11580 Solyc09g010240.3 15 0 0 2 0 2 3 0 3 0 0 4 1 3 7 Unknown protein Solyc09g010250.1 19 5 1 3 0 5 1 5 2 3 0 3 2 1 1 Unknown protein Solyc09g010260.4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 9 (AHRD V3.3 *-* A0A2G2VX02_CAPBA) Solyc09g010280.3 1652 1705 1822 1533 1525 1640 1708 1426 2202 1282 1608 1496 1750 2213 1832 LETM1-like (AHRD V3.3 *** A0A200QVE4_9MAGN) AT3G11560 Solyc09g010270.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 9 (AHRD V3.3 *-* A0A2G2VX02_CAPBA) Solyc09g010285.1 125 140 160 125 84 130 114 92 113 134 124 143 137 171 157 RVT_1 domain-containing protein/Intron_maturas2 domain-containing protein (AHRD V3.3 *** A0A1Q3D1B4_CEPFO) AT1G74350 Solyc09g010300.3 3500 1930 1563 2950 2149 2345 2327 2181 1249 3480 2090 2327 1510 1790 1750 mRNA-decapping enzyme-like protein (AHRD V3.3 *** A0A2G3BIX2_CAPCH) Solyc09g010320.3 93 110 132 139 93 100 152 125 156 103 55 101 131 120 79 Mitochondrial fission protein ELM1 (AHRD V3.3 *** A0A2G2YPH4_CAPAN) Solyc09g010330.4 2252 3509 2651 2016 2738 2322 2418 2845 2737 1806 2056 2620 4416 3332 2567 Nascent polypeptide-associated complex subunit beta (AHRD V3.3 *** A0A2G3DD77_CAPCH) AT1G73230 Solyc09g010350.4 1195 629 578 659 550 486 515 603 712 739 727 742 508 526 857 N-lysine methyltransferase (AHRD V3.3 *** Q9FNA6_ARATH) AT5G13660 Solyc09g010360.3 232 563 676 1154 453 253 287 239 346 333 333 212 370 259 669 WAT1-related protein (AHRD V3.3 *** K4CR63_SOLLC) AT2G37460 Solyc09g010370.3 1757 1960 1893 2069 2278 2223 2061 2228 1900 2112 2305 2009 2059 1830 1978 Rab family GTPase (AHRD V3.3 *** A0A1Y1I3W2_KLENI) AT3G46060 Solyc09g010380.3 433 1282 1209 1063 1484 1235 1205 1397 743 1190 1030 1033 559 811 669 Soluble inorganic pyrophosphatase-like protein (AHRD V3.3 *** A0A2K3NXW2_TRIPR) AT3G53620 Solyc09g010390.2 572 720 411 809 267 218 389 522 365 603 315 417 869 832 644 hypothetical protein (AHRD V3.3 *** AT3G53630.1) AT3G53630 Solyc09g010400.3 988 2226 2511 2247 3764 4365 3031 3589 1580 2291 2240 3147 731 1820 952 Histone H2A (AHRD V3.3 *** A0A2G2VY95_CAPBA) AT5G02560 Solyc09g010410.3 1296 1162 1294 1365 1030 1179 1196 1095 1299 1249 1265 1100 1329 1318 1436 hypothetical protein (AHRD V3.3 *-* AT3G53670.2) AT3G53670 Solyc09g010420.4 355 709 564 675 974 851 763 1079 783 501 734 861 588 731 477 Arginine biosynthesis bifunctional protein ArgJ, chloroplastic (AHRD V3.3 *** A0A2G2YQV3_CAPAN) AT2G37500 Solyc09g010430.1 76 150 137 202 199 163 121 189 123 109 155 122 101 138 84 Unknown protein Solyc09g010440.3 934 1062 1279 1475 1169 916 1031 893 921 764 1132 701 1353 1191 2351 Actin-depolymerizing factor (AHRD V3.3 *** Q1EMP8_PLAMJ) AT3G46010 Solyc09g010450.1 163 204 205 214 231 280 219 274 240 203 136 227 182 284 193 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PZE9_9MAGN) AT3G53700 Solyc09g010460.3 7057 8490 6539 4597 5526 5780 5588 6049 6748 5148 5430 5758 8232 8148 6936 Eukaryotic translation initiation factor 3 subunit A (AHRD V3.3 *** A0A2G2VY82_CAPBA) AT4G11420 Solyc09g010470.3 462 374 390 539 435 537 483 381 345 491 376 469 363 314 380 UNC93-like protein 3 (AHRD V3.3 *** A0A2G2YQV1_CAPAN) AT3G09470 Solyc09g010480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Forkhead box protein G1 (AHRD V3.3 *** F4IQY1_ARATH) AT2G37530 Solyc09g010485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *-* A0A2U1L5V5_ARTAN) Solyc09g010490.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *-* A0A2U1L5V5_ARTAN) Solyc09g010495.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1L5V5_ARTAN) Solyc09g010500.3 2773 2746 3300 2012 2508 2695 2463 2641 2724 1687 2807 2421 3641 3099 3160 DNA-directed RNA polymerases II, IV and V subunit 6A (AHRD V3.3 *** A0A2U1PRN9_ARTAN) AT2G04630 Solyc09g010510.4 45 172 242 257 225 224 133 206 197 154 194 238 62 192 49 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1QM80_ARTAN) AT5G02540 Solyc09g010520.3 2600 2280 3197 2545 2460 2918 2643 2433 2700 2436 3483 2332 2502 2610 3353 ADP-ribosylation factor GTPase-activating protein 1 (AHRD V3.3 *** A0A1U8EA26_CAPAN) AT3G53710 Solyc09g010530.3 379 354 15 550 61 71 44 71 77 58 8 13 186 28 24 Cation/H(+) antiporter 20 (AHRD V3.3 *** A0A1U8E5Q9_CAPAN) AT3G53720 Solyc09g010550.4 830 614 581 481 586 620 623 525 668 434 602 521 465 820 738 dentin sialophosphoprotein-like protein (AHRD V3.3 *-* AT5G02520.2) AT5G02520 Solyc09g010560.3 812 645 688 599 612 599 594 712 829 705 727 629 661 725 785 5-oxoprolinase (AHRD V3.3 *** A0A2G3BK16_CAPCH) AT5G37830 Solyc09g010565.1 404 792 1009 950 946 1029 1010 768 768 734 960 751 1144 952 1083 Unknown protein Solyc09g010570.1 75 44 16 63 33 20 24 26 62 18 7 20 42 35 73 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein (AHRD V3.3 *-* A0A2U1MC19_ARTAN) Solyc09g010580.3 6 0 2 5 5 5 2 5 2 2 6 10 1 1 6 Unknown protein Solyc09g010590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1LTK9_ARTAN) Solyc09g010600.1 89 43 102 58 46 80 91 56 12 25 99 25 54 93 125 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) Solyc09g010605.1 15 25 39 8 4 9 24 16 6 6 40 28 7 18 29 Unknown protein Solyc09g010610.3 42 34 35 45 59 49 53 65 22 14 21 36 15 30 25 E3 ubiquitin-protein ligase RING1-like (AHRD V3.3 *** A0A2G3BK63_CAPCH) Solyc09g010620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD40 repeat (AHRD V3.3 *-* A0A200PPU0_9MAGN) Solyc09g010630.3 101028 88208 65339 66721 76051 87770 72871 69311 63739 68209 57805 71122 72471 64067 61713 HSC2-like AT3G12580 Solyc09g010640.2 2087 1236 1884 1365 1073 1319 1129 1006 1105 1242 2092 1253 1305 1277 1605 FYD (AHRD V3.3 *** AT3G12570.4) AT2G37570 Solyc09g010650.1 45 53 16 22 17 18 6 15 25 42 22 30 50 44 56 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1QK74_ARTAN) Solyc09g010660.3 374 385 248 432 527 474 542 561 356 630 356 542 356 263 248 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) AT2G37585 Solyc09g010670.4 180 205 331 257 216 158 231 187 220 214 300 224 220 228 228 Transcription factor DP (AHRD V3.3 *-* A0A1Y1HJS8_KLENI) Solyc09g010680.3 663 687 688 714 462 425 411 413 408 605 702 444 644 662 582 Dof zinc finger protein DOF3.6 (AHRD V3.3 *** A0A2G3BK09_CAPCH) AT5G02460 Solyc09g010690.4 2002 2846 3715 4243 5626 5554 5608 4787 3195 2747 3610 4082 2827 3070 4327 Ankyrin repeat family protein, putative, expressed (AHRD V3.3 *** Q10NB7_ORYSJ) Solyc09g010710.4 157 264 188 255 431 330 330 480 229 170 253 341 160 172 140 peptide transporter family protein (AHRD V3.3 *** AT3G09430.1) AT3G09430 Solyc09g010720.3 6 2 0 1 0 1 0 0 1 1 3 0 0 1 1 WD40 repeat (AHRD V3.3 *** A0A200QES9_9MAGN) AT2G37670 Solyc09g010730.1 3 2 0 7 5 1 5 3 3 2 7 1 6 1 0 cyclin-dependent protein kinase inhibitor SMR3-like (AHRD V3.3 *-* A0A2I4FWF9_9ROSI) Solyc09g010740.4 621 470 499 435 339 431 359 427 384 560 353 403 686 395 532 Peptidylprolyl isomerase (AHRD V3.3 *-* A0A2G2YNK8_CAPAN) AT2G37435 Solyc09g010750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin (AHRD V3.3 *** A0A0K1JSF1_9FABA) Solyc09g010760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin (AHRD V3.3 --* ACT_FUCDI) Solyc09g010770.3 862 648 473 510 598 541 548 503 447 688 458 531 570 582 653 Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase (AHRD V3.3 *** A0A2G2VXD5_CAPBA) AT5G02410 Solyc09g010780.3 270 191 235 232 90 85 68 96 217 365 283 165 198 152 198 Protein phosphatase 2C (AHRD V3.3 *-* A0A2U1P5P3_ARTAN) Solyc09g010790.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 TRM32-like protein (DUF3741) (AHRD V3.3 *-* Q9LZ87_ARATH) AT5G02390 Solyc09g010800.5.1 22487 15607 27033 33642 9178 9393 9370 6556 24744 22006 36182 12013 29834 25979 72408 Metallothionein-like protein type 2 (AHRD V3.3 *** A0A2G2VXD7_CAPBA) AT3G09390 Solyc09g010810.3 128 648 637 784 1340 1256 1259 1361 679 474 645 876 220 409 373 Kinesin-like protein (AHRD V3.3 *** A0A2G2YR28_CAPAN) AT5G02370 Solyc09g010820.3 427 388 292 403 417 518 509 431 327 312 410 312 270 335 302 Myb-related protein 3R-1 (AHRD V3.3 *** A0A2G2VTL7_CAPBA) AT5G02320 Solyc09g010830.4 1136 1066 1301 1359 1418 1490 1367 1366 1338 1353 1299 1280 854 1249 1296 E3 ubiquitin-protein ligase ubr3-like protein (AHRD V3.3 *** A0A2K3NLG7_TRIPR) AT5G02310 Solyc09g010840.1 3555 6462 5886 5955 11314 12031 10812 9964 4085 3908 5212 7540 4527 5663 3290 phantastica AT2G37630 Solyc09g010850.4 1259 878 1293 769 364 347 307 286 600 910 1117 511 1397 891 957 Protein kinase APK1B, chloroplastic (AHRD V3.3 *** A0A2G2VY45_CAPBA) AT5G02290 Solyc09g010860.4 169 1470 598 1042 1360 1236 1067 1177 1454 1053 810 825 865 1122 975 expansin precursor 4 AT2G37640 Solyc09g010870.4 963 870 743 1041 700 871 951 874 880 765 652 742 732 959 689 Ribonuclease II/R (AHRD V3.3 *** A0A200R1B9_9MAGN) AT5G02250 Solyc09g010880.3 318 442 454 466 480 442 398 541 460 625 455 414 513 466 500 Rhomboid-like protein (AHRD V3.3 *** A0A1U8EGH3_CAPAN) AT2G29050 Solyc09g010890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic (AHRD V3.3 *-* A0A2G2YN05_CAPAN) Solyc09g010900.1 4 0 0 3 0 1 1 2 8 6 0 1 0 0 8 Unknown protein Solyc09g010910.3 11 17 2 7 18 13 7 5 23 12 28 10 13 8 1 Unknown protein Solyc09g150103.1 262 165 386 284 279 299 349 240 247 189 340 210 176 231 282 F-box protein CPR1-like isoform X1 (AHRD V3.3 *-* XP_010312750.1) Solyc09g150104.1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 Unknown protein Solyc09g010920.1 312 314 307 201 211 180 226 256 242 289 153 243 375 258 200 Transcription factor GRAS (AHRD V3.3 *** A0A200R547_9MAGN) AT2G37650 Solyc09g010930.4 815 1800 1850 1882 3197 3157 3651 2736 2506 1464 1947 2059 1336 1486 1532 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1L7N5_ARTAN) AT2G37660 Solyc09g010940.4 13532 6097 2932 3375 2576 2249 1900 2171 4395 12494 5475 4575 1458 2166 2170 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A1P8BF18_ARATH) AT5G02230 Solyc09g010950.3 1334 1387 1045 1024 1142 1144 1109 1189 1378 1003 1006 1154 1188 1270 1172 ATP-dependent zinc metalloprotease FTSH 3, mitochondrial (AHRD V3.3 *** A0A2G2VYB5_CAPBA) AT1G07510 Solyc09g010960.3 4 35 36 53 11 10 17 9 76 59 68 41 7 12 86 WRKY transcription factor 49 AT5G43290 Solyc09g010970.4 312 500 717 583 485 641 676 481 568 388 611 389 589 554 550 Carbonic anhydrase (AHRD V3.3 *** A0A2G3BK77_CAPCH) AT4G33580 Solyc09g010980.1 67 82 516 81 74 54 48 47 63 79 203 50 85 78 26 cyclin-dependent kinase inhibitor (AHRD V3.3 -** AT5G02220.1) Solyc09g010990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 Laccase (AHRD V3.3 *** K4CRC5_SOLLC) Solyc09g010995.1 3 141 52 34 52 72 44 47 61 97 40 60 1 36 65 Laccase (AHRD V3.3 *** M1AHJ4_SOLTU) AT5G60020 Solyc09g010997.1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 Cyclin (AHRD V3.3 *** A0A200R521_9MAGN) AT5G02110 Solyc09g011010.3 75 133 75 112 247 225 169 187 135 132 86 109 106 65 17 High-light-induced protein, chloroplastic (AHRD V3.3 *** A0A1U8FG85_CAPAN) AT5G02120 Solyc09g011020.4 988 486 426 370 198 249 282 246 448 471 497 410 451 518 581 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT5G02130.1) AT5G02130 Solyc09g011030.3 1226 1027 859 734 786 625 675 834 974 716 612 960 983 925 745 Hsp70 nucleotide exchange factor FES1 (AHRD V3.3 *** A0A1J3K956_NOCCA) AT3G09350 Solyc09g011040.1 25 148 101 121 156 175 188 179 124 145 106 193 71 76 52 Aspartic proteinase PCS1 (AHRD V3.3 *** A0A2G2YR66_CAPAN) AT5G02190 Solyc09g150105.1 0 70 43 37 27 45 32 31 46 51 60 101 0 31 37 Laccase (AHRD V3.3 *** M1AHJ4_SOLTU) AT5G60020 Solyc09g011060.2 64 63 112 114 20 33 19 46 82 76 75 47 68 95 31 Lectin receptor kinase (AHRD V3.3 *** B8XSM9_WHEAT) AT2G37710 Solyc09g011070.1 131 170 166 189 185 205 216 201 239 131 149 156 185 193 164 Lectin receptor kinase (AHRD V3.3 *** B8XSM8_WHEAT) AT3G55550 Solyc09g011080.3 173 356 14 208 1030 691 613 1067 382 214 18 153 290 22 5 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (AHRD V3.3 *** A0A2G2VP29_CAPBA) AT2G39730 Solyc09g011090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** O80941_ARATH) AT2G37730 Solyc09g011100.1 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 Plant self-incompatibility protein S1 family (AHRD V3.3 *** A0A2U1NP42_ARTAN) AT4G24974 Solyc09g011110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcriptional regulator SUPERMAN (AHRD V3.3 *** A0A2G3AYQ1_CAPCH) AT3G09290 Solyc09g011120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 *-* A0A200R533_9MAGN) AT2G37740 Solyc09g011125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NJ94_TRIPR) Solyc09g011130.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IKL5_ARATH),Pfam:PF13561 Solyc09g011140.4 234 204 78 314 76 69 90 47 198 265 160 115 158 39 48 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A1P8AYM6_ARATH),Pfam:PF13561 Solyc09g011150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta, chloroplastic (AHRD V3.3 *-* A0A2U1KL25_ARTAN) Solyc09g011160.4 620 138 427 454 463 494 609 288 445 132 75 294 133 58 42 Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A1I9LSN5_ARATH) Solyc09g011170.3 5016 3260 4725 5043 3247 3515 3328 3016 4957 4431 5622 3572 3051 5140 11336 Prf interactor 30137 Solyc09g011190.1 14 2 5 6 9 1 2 1 5 7 5 6 2 1 29 Legume-specific protein (AHRD V3.3 *-* S5VL86_9FABA) AT2G37750 Solyc09g011200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Wall-associated receptor kinase-like 20 (AHRD V3.3 *** A0A2G2YR09_CAPAN) AT5G02070 Solyc09g011210.4 319 257 486 336 364 458 380 323 276 257 417 332 265 320 257 RNA binding protein (AHRD V3.3 *** B6U487_MAIZE) AT1G73530 Solyc09g011220.3 157 223 324 247 253 244 292 247 208 214 292 262 235 236 284 Glucose-1-phosphate adenylyltransferase family protein (AHRD V3.3 *** A0A2U1PR08_ARTAN) Solyc09g011223.1 195 317 479 422 590 638 621 447 255 345 358 335 329 313 324 CASP-like protein (AHRD V3.3 *** A0A1Q3D8R0_CEPFO) Solyc09g011227.1 0 0 6 0 0 1 0 0 0 1 0 3 0 0 1 Unknown protein Solyc09g011240.3 302 882 659 905 1604 1378 1487 1399 1042 808 600 914 1045 798 871 NAD(P)-linked oxidoreductase superfamily protein (AHRD V3.3 *** A0A2U1L511_ARTAN) AT2G37790 Solyc09g011250.3 102 213 256 216 261 264 250 190 144 156 241 200 290 244 195 Mitochondrial glycoprotein (AHRD V3.3 *** A0A200QYU1_9MAGN) Solyc09g011260.2 14 5 10 6 0 2 2 0 1 8 3 11 92 20 0 Cysteine/histidine-rich C1 domain protein (AHRD V3.3 *** F4IRV7_ARATH) Solyc09g011270.4 883 473 269 209 57 58 65 61 203 623 215 101 1105 280 158 Cysteine/histidine-rich C1 domain protein (AHRD V3.3 *** A0A1P8AY95_ARATH) AT2G37820 Solyc09g011280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pectinesterase inhibitor 2-like (AHRD V3.3 *** A0A1S4AAA8_TOBAC) Solyc09g011290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell wall / vacuolar inhibitor of fructosidase 2 (AHRD V3.3 *** CVIF2_ARATH) Solyc09g011300.3 593 1072 1223 1150 1349 1483 1625 1229 840 756 1063 929 800 967 1052 Uracil phosphoribosyltransferase (AHRD V3.3 *** A0A2G2VY34_CAPBA),Pfam:PF14681 AT3G53900 Solyc09g011310.3 755 888 823 824 878 812 837 930 994 1156 558 876 1210 825 720 PRA1 family protein (AHRD V3.3 *** A0A1U8E536_CAPAN) AT5G02040 Solyc09g011320.3 915 549 603 527 461 415 453 426 483 568 508 427 521 575 624 Serine/threonine-protein kinase (AHRD V3.3 *** A0A0K0XR56_TOBAC) AT2G37840 Solyc09g011330.3 40 21 82 48 54 29 38 50 26 22 64 32 39 18 23 Receptor protein kinase ZmPK1 (AHRD V3.3 *** A0A2U1Q3R8_ARTAN) Solyc09g011340.3 462 733 782 733 929 1049 1009 867 888 587 625 886 1067 969 809 protein RETICULATA, chloroplastic-like (AHRD V3.3 *** A0A2I4ELL8_9ROSI) AT2G37860 Solyc09g011350.3 66 145 159 119 415 370 273 407 141 138 174 249 120 95 71 protein MIZU-KUSSEI 1-like (AHRD V3.3 *** A0A2I4DSR5_9ROSI) AT2G37880 Solyc09g011360.4 571 826 828 740 877 948 914 758 651 508 601 649 897 868 682 Mitochondrial substrate carrier family protein (AHRD V3.3 *** Q8W4M2_ARATH) AT3G53940 Solyc09g011370.3 342 202 277 249 177 224 186 176 238 302 294 267 189 206 247 F-box/LRR-repeat protein 14 (AHRD V3.3 *** A0A2G3BKI4_CAPCH) AT1G80570 Solyc09g011380.3 2170 1619 1669 1764 2076 2140 1752 2108 1588 1856 1767 1684 1831 1549 1135 BEL1-like homeodomain protein 9 (AHRD V3.3 *** A0A2G2VXF9_CAPBA) AT5G02030 Solyc09g011400.1 3 16 1 1 0 0 0 4 7 2 0 0 0 4 0 Protein NRT1/ PTR FAMILY 5.7 (AHRD V3.3 *-* A0A1U8FEF1_CAPAN) Solyc09g011410.4 295 263 349 316 308 269 267 305 232 287 345 294 240 255 408 Copper ion transmembrane transporter (AHRD V3.3 *-* A0A2U1LAH1_ARTAN) AT2G37920 Solyc09g011420.3 1785 4025 3002 2643 2022 2109 2069 2140 2135 1754 2041 2181 5794 4718 2521 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (AHRD V3.3 *** A0A2U1Q8Q2_ARTAN) AT4G22380 Solyc09g011430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 *** AT3G09280.1) AT3G09280 Solyc09g011450.4 2132 1525 1403 1053 1181 948 871 1146 1374 1830 1116 1280 1816 1505 1120 Proteasome inhibitor-related protein (AHRD V3.3 *** A0A2U1KX98_ARTAN) AT3G53970 Solyc09g011455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein MAIN-LIKE 2-like (AHRD V3.3 *-* XP_025887776.1) Solyc09g011470.3 1717 631 189 251 232 196 194 157 217 835 265 238 270 340 315 Plant/T7H20-70 protein (AHRD V3.3 *-* G7L5L0_MEDTR) AT5G02020 Solyc09g011480.3 381 476 846 869 1148 1216 1011 947 542 566 615 774 387 547 551 Rop guanine nucleotide exchange factor 5 (AHRD V3.3 *** A0A2G2YRE0_CAPAN) AT5G02010 Solyc09g011490.3 361 239 332 183 97 164 124 126 187 236 145 191 781 201 132 Glutathione S-transferase (AHRD V3.3 *** C0LF68_CAPAN) AT3G09270 Solyc09g011500.3 2 1 0 1 0 3 0 0 1 1 0 7 13 3 4 Glutathione S-transferase (AHRD V3.3 *** C0LF68_CAPAN) AT3G09270 Solyc09g011510.2 6 18 17 7 6 9 9 14 13 8 8 7 158 13 18 Glutathione S-transferase-like protein (AHRD V3.3 *** A8DUB0_SOLLC) Solyc09g011520.3 14 54 6 4 1 0 0 1 2 44 12 0 494 6 19 Glutathione S-transferase-like protein (AHRD V3.3 *** A8DUB0_SOLLC) AT3G09270 Solyc09g011530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase-like protein (AHRD V3.3 *-* A8DUB0_SOLLC) Solyc09g011540.2 7 6 10 3 0 0 0 0 7 11 9 0 54 1 0 Glutathione S-transferase (AHRD V3.3 *** C0LF68_CAPAN) AT3G09270 Solyc09g011550.3 61 36 47 13 0 0 0 1 16 48 32 12 66 36 28 Glutathione S-transferase (AHRD V3.3 *** C0LF68_CAPAN) AT3G09270 Solyc09g011560.3 195 136 74 52 5 25 14 11 32 71 47 27 270 144 73 Glutathione S-transferase (AHRD V3.3 *** C0LF68_CAPAN) AT3G09270 Solyc09g011590.4 140 220 102 51 7 7 7 8 65 112 114 25 900 137 142 Glutathione S-transferase-like protein (AHRD V3.3 *** A8DUB0_SOLLC) AT3G09270 Solyc09g011600.3 841 311 569 299 115 132 141 116 269 207 788 189 697 414 744 glutathione S-transferase AT3G09270 Solyc09g011610.3 69 11 36 34 0 3 3 4 12 12 32 6 79 40 43 Glutathione S-transferase (AHRD V3.3 *-* C0LF68_CAPAN) Solyc09g011620.2 3 0 3 1 0 0 0 0 0 0 2 0 3 0 0 Glutathione S-transferase-like protein (AHRD V3.3 *** A8DUB0_SOLLC) AT3G09270 Solyc09g011630.3 111 330 43 31 0 0 0 2 25 222 12 3 2329 131 113 Glutation-S-transferase AT3G09270 Solyc09g011640.5.1 101 97 147 89 19 19 23 22 51 98 70 42 113 85 63 Glutathione S-transferase-like protein (AHRD V3.3 *** A8DUB0_SOLLC) AT3G09270 Solyc09g011645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc09g011650.4 178 104 58 62 13 9 3 10 37 50 45 24 201 89 114 Glutathione S-transferase (AHRD V3.3 *** A0A173GPJ1_9ASPA) Solyc09g011660.3 356 135 544 249 65 56 57 43 440 478 479 250 269 354 356 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A2U1NYH2_ARTAN) AT3G53990 Solyc09g011665.1 2 0 1 0 0 0 0 0 2 0 2 0 0 0 0 Copper transporter (AHRD V3.3 *** A0A2K3K414_TRIPR) Solyc09g011670.4 320 209 395 235 77 117 84 76 499 373 439 316 317 365 336 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A2U1NYH2_ARTAN) AT3G53990 Solyc09g011680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc09g011690.4 3363 4192 5171 3284 3389 3848 3399 3061 3700 2640 6762 3567 3554 3497 3539 TIP41-like protein (AHRD V3.3 *** Q84JE0_ARATH) AT3G54000 Solyc09g011695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc09g011700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Copper transporter (AHRD V3.3 *** E9LK42_VITVI) Solyc09g011710.4 3866 2326 3089 5535 265 141 128 118 1205 2745 1538 420 4571 3721 5007 Class I heat shock protein (AHRD V3.3 *** A0A2K3JRP0_TRIPR) Solyc09g011720.3 628 1356 1330 1438 1729 1503 1480 1457 1577 1094 1299 1200 968 1166 1378 DUF3527 domain-containing protein (AHRD V3.3 *** A0A1Q3BBP6_CEPFO) AT5G01030 Solyc09g011730.4 322 268 252 232 176 265 215 233 346 275 245 280 329 256 350 Nuclear transport factor 2 (NTF2) family protein (AHRD V3.3 *** A0A178VFU5_ARATH) Solyc09g011740.4 562 610 1266 754 524 568 496 599 546 868 1032 463 690 572 516 Phosphatidylinositol:ceramide inositolphosphotransferase (AHRD V3.3 *** A0A1U8EEU4_CAPAN) AT3G54020 Solyc09g011750.3 38 307 204 290 194 155 177 174 355 95 210 173 188 257 410 Protein kinase domain (AHRD V3.3 *** A0A200R4T5_9MAGN) AT5G59010 Solyc09g011760.3 933 795 1093 969 886 1044 1026 729 719 697 1024 798 1113 1024 1185 Mitochondrial import inner membrane translocase subunit TIM10 (AHRD V3.3 *** A0A2G2VX96_CAPBA) AT2G29530 Solyc09g011770.3 341 373 686 641 298 461 447 315 318 322 526 482 485 560 587 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* B6SN54_MAIZE) AT5G05830 Solyc09g011780.3 98 130 228 98 104 102 122 89 107 97 151 111 170 158 88 R2R3MYB transcription factor 1 AT3G09230 Solyc09g011790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PAR1-like protein (AHRD V3.3 *** A0A2U1KIG3_ARTAN) Solyc09g011800.3 0 5 8 1 0 1 10 9 0 0 4 0 3 0 0 PAR1 (AHRD V3.3 *** A0A200R4T9_9MAGN) Solyc09g011810.3 53 215 88 102 205 178 181 229 236 158 123 123 112 77 125 Fructose-1,6-bisphosphatase (AHRD V3.3 *** B6TSK5_MAIZE) AT3G54050 Solyc09g011820.4 33 527 441 446 601 607 714 580 438 225 253 493 158 539 160 Myosin-M heavy protein (AHRD V3.3 *** Q5S4W1_ARATH) AT2G37960 Solyc09g011830.4 345 420 565 463 559 504 502 473 589 413 538 437 334 432 637 Transcription termination/antitermination protein NusG (AHRD V3.3 *** A0A1J3CCF2_NOCCA) AT3G09210 Solyc09g011840.1 635 732 942 675 1236 1206 868 1098 883 782 625 988 653 608 471 Lectin_legB domain-containing protein (AHRD V3.3 *** A0A1Q3BCE3_CEPFO) AT5G01090 Solyc09g011850.4 320 526 688 931 488 554 635 492 443 715 490 655 668 650 551 Fructokinase-like protein 1 (AHRD V3.3 *** D9IWP2_SOLTU) AT3G54090 Solyc09g011860.4 296 132 398 99 34 34 62 40 41 104 544 52 96 153 163 GDP-fucose protein O-fucosyltransferase protein (AHRD V3.3 *** A0A2R6R8C5_ACTCH) AT2G37980 Solyc09g011865.1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc09g011870.3 183 221 298 107 7 9 10 21 37 315 408 94 434 214 63 Arogenate dehydrogenase 2 (AHRD V3.3 *** F1BPV6_SOLPN) Solyc09g011880.3 2084 1236 1728 1013 990 1011 1066 986 1145 2120 1490 1149 1431 1084 988 protein SSUH2 homolog (AHRD V3.3 *** A0A2I4DWW5_9ROSI) AT2G38000 Solyc09g011890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF674 family protein (AHRD V3.3 *-* A0A2K3L8A7_TRIPR) Solyc09g011900.1 0 4 1 1 0 0 0 0 0 0 0 0 6 0 0 Unknown protein Solyc09g011910.3 299 248 249 242 214 225 216 203 254 252 264 210 257 242 199 DUF674 family protein (AHRD V3.3 *** A0A2K3PIU4_TRIPR) AT5G01150 Solyc09g011920.3 385 620 617 580 588 574 713 596 630 470 569 545 712 601 400 uncoupling protein AF472619 AT3G54110 Solyc09g011930.3 3028 2184 2256 2347 2072 2222 2600 2031 2338 2239 2166 2225 1855 2437 2072 mRNA capping enzyme family protein (AHRD V3.3 *** A0A2U1MNN8_ARTAN) AT3G09100 Solyc09g150106.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2Y582_CAPAN) Solyc09g011960.2 8 58 33 32 77 49 38 58 43 65 44 42 0 13 49 Laccase (AHRD V3.3 *** K4CRM1_SOLLC) AT5G60020 Solyc09g011970.3 0 3 0 0 2 3 0 0 2 0 0 0 0 0 1 Laccase (AHRD V3.3 *** K4CRM2_SOLLC) Solyc09g011980.1 1 1 12 0 0 1 1 0 2 3 7 0 4 1 0 Lectin receptor kinase (AHRD V3.3 *-* B8XSM8_WHEAT) Solyc09g011990.1 4 3 0 2 0 0 0 0 0 2 8 0 2 0 0 Lectin receptor kinase (AHRD V3.3 *** B8XSM9_WHEAT) AT2G37710 Solyc09g012000.1 181 195 134 126 121 152 102 112 134 107 83 155 107 89 38 Lectin receptor kinase (AHRD V3.3 *** B8XSM9_WHEAT) AT2G37710 Solyc09g012010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200Q000_9MAGN) Solyc09g012020.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 F-box domain (AHRD V3.3 *** A0A200R4Q7_9MAGN) Solyc09g012040.1 2 3 6 4 1 5 0 2 4 4 0 1 0 0 0 Unknown protein Solyc09g012050.1 0 0 0 0 0 1 0 1 0 0 0 3 0 0 0 HAT transposon superfamily protein (AHRD V3.3 *-* Q9LDK4_ARATH) Solyc09g013070.3 243 562 454 1073 521 715 883 853 312 580 597 643 499 533 529 Steroid 5-alpha-reductase DET2 (AHRD V3.3 *-* A0A1U8EBY8_CAPAN) Solyc09g013080.3 1065 2395 1689 1978 2265 2068 2012 2540 2792 1574 1591 1838 2559 2637 2284 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (AHRD V3.3 *** B5LAS6_CAPAN) AT2G38040 Solyc09g013090.4 346 175 144 156 145 146 149 167 147 198 154 129 187 183 269 OTU domain-containing protein (AHRD V3.3 *** A0A1Q3BKJ5_CEPFO) AT2G38025 Solyc09g013100.3 331 822 491 534 853 624 627 861 613 560 438 666 659 684 447 Protein TIC 56, chloroplastic (AHRD V3.3 *** A0A1U8F621_CAPAN) AT5G01590 Solyc09g013110.3 148 175 284 245 207 219 239 183 205 185 349 165 134 169 246 Reticulon-like protein (AHRD V3.3 *** A0A2G3BKW2_CAPCH) AT3G54120 Solyc09g013120.4 4044 3075 2124 2027 2408 2052 2202 2454 1884 2404 2141 2335 2946 2580 2368 RING/U-box superfamily protein (AHRD V3.3 *** AT5G01160.2) AT5G01160 Solyc09g013130.3 986 1334 1360 1210 1484 1653 1558 1497 1447 1173 1216 1424 1356 1509 1326 Defective in exine formation protein, putative, expressed (AHRD V3.3 *** Q10BA5_ORYSJ) AT3G09090 Solyc09g013140.3 47 46 50 44 74 45 35 63 44 87 63 54 41 42 34 DUF962 domain-containing protein (AHRD V3.3 *** A0A1Q3BKN1_CEPFO) AT3G09085 Solyc09g013150.4 23 14 19 41 99 84 73 83 32 17 21 38 12 21 30 Phosphate transporter (AHRD V3.3 *** A0A2H4H6T2_MALDO) AT2G38060 Solyc09g013160.3 24 150 280 204 330 342 381 386 208 107 175 279 54 166 96 WD40 repeat (AHRD V3.3 *** A0A200R4P8_9MAGN) AT3G09080 Solyc09g014160.3 347 1106 1231 1166 1716 1676 1433 1894 1412 697 839 1356 986 1180 614 UPF0503 protein At3g09070, chloroplastic-like (AHRD V3.3 *** A0A2I4FKI6_9ROSI) AT3G09070 Solyc09g014170.3 787 925 1102 877 1128 1193 1119 1106 1019 843 934 870 976 941 945 ELM2 domain (AHRD V3.3 *-* A0A200R4Q2_9MAGN) Solyc09g014210.3 134 135 101 96 116 125 112 119 118 117 107 166 93 160 122 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8F8I5_CAPAN) AT3G09060 Solyc09g014215.2 242 131 152 182 213 145 167 161 154 166 275 184 94 121 244 8-amino-7-oxononanoate synthase (AHRD V3.3 *** AT3G09050.1) AT3G09050 Solyc09g014220.3 0 3 7 9 7 3 1 8 0 3 0 5 0 1 0 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AP16_ARATH) AT3G54140 Solyc09g014230.2 8 23 38 29 15 11 8 7 17 7 45 38 7 20 69 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AP16_ARATH) Solyc09g014240.4 18 76 81 63 78 36 36 15 54 57 101 49 5 71 96 Laccase (AHRD V3.3 *** K4CRQ1_SOLLC) AT2G38080 Solyc09g014250.3 266 432 471 472 391 425 408 383 507 323 337 335 582 375 528 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G2VYG4_CAPBA) AT2G38090 Solyc09g014260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3AMK9_CAPAN) Solyc09g014270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3AXR7_CAPCH) Solyc09g014280.1 2932 2518 3376 1463 1554 1359 1158 1582 1609 5640 3931 1696 747 1888 2742 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** V5PZN5_9CARY) AT5G01210 Solyc09g014300.3 461 472 474 618 766 613 652 714 635 582 469 600 465 521 435 Sulfoquinovosyl transferase SQD2 (AHRD V3.3 *** A0A2G2YRJ7_CAPAN) AT5G01220 Solyc09g014310.3 0 0 4 4 0 2 1 0 1 0 3 0 0 1 7 Desiccation-related protein PCC13-62 (AHRD V3.3 *-* A0A2G2W7R3_CAPBA),Pfam:PF13668 AT3G62730 Solyc09g014320.4 315 488 562 574 586 526 518 477 442 342 529 396 669 586 579 AdoMet-dependent rRNA methyltransferase SPB1 (AHRD V3.3 *-* M3BBZ0_PSEFD) AT5G01230 Solyc09g014350.3 562 1240 900 907 376 429 289 381 1208 1123 1106 1398 920 549 349 Glycerol-3-phosphate acyltransferase, expressed (AHRD V3.3 *** D8L9N9_WHEAT) AT2G38110 Solyc09g014380.3 1025 1083 1131 1286 580 544 535 545 1063 954 1102 686 900 1077 1250 SlLAX1 AT2G38120 Solyc09g014390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha 1,4-glycosyltransferase family protein (AHRD V3.3 *** F4IS00_ARATH) AT2G38150 Solyc09g014400.3 759 565 355 391 620 523 491 527 537 409 396 401 414 334 311 Phosphoglucan, water dikinase, chloroplastic (AHRD V3.3 *-* A0A1J3J5B0_NOCCA) AT5G01260 Solyc09g014410.3 1028 565 523 483 379 465 463 449 632 707 484 473 474 482 395 Unknown protein Solyc09g014440.4 419 507 506 440 703 713 767 732 645 415 352 468 539 589 403 RNA polymerase II C-terminal domain phosphatase-like 2 (AHRD V3.3 *** A0A2G2YRP1_CAPAN) AT5G01270 Solyc09g014430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g014450.4 1737 630 477 374 313 319 279 326 407 493 514 404 591 503 571 Clathrin light chain (AHRD V3.3 *** A0A2G3BKE5_CAPCH) AT2G40060 Solyc09g014460.1 7 0 0 9 0 0 10 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1LJI2_ARTAN) Solyc09g014470.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1LJI2_ARTAN) Solyc09g014480.3 366 2047 1860 951 2740 1945 1872 2470 4749 3626 3416 4319 1693 1654 677 Polygalacturonase inhibiting protein (AHRD V3.3 *** D7RJV7_CAPAN) Solyc09g014490.4 190 1393 967 1203 3168 2805 2682 3304 1547 1299 1225 1780 811 1281 766 flocculation FLO11-like protein (AHRD V3.3 *-* AT2G40070.2) Solyc09g014500.3 294 169 235 287 226 245 266 211 131 208 252 207 244 171 344 Protein yippee-like (AHRD V3.3 *** A0A2G3BKF5_CAPCH) AT3G08990 Solyc09g014510.3 136 153 111 112 119 91 116 106 82 75 82 100 111 111 86 Mitochondrial inner membrane protease subunit 2 (AHRD V3.3 *** A0A2U1NNS9_ARTAN) AT3G08980 Solyc09g014520.3 7479 10699 7430 10021 19982 18279 18420 18055 11025 13582 7808 9980 8727 5273 7191 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3BKI1_CAPCH) AT5G01530 Solyc09g014525.1 159 354 157 382 245 208 216 237 308 419 1471 246 979 447 1110 MLP-like protein 43 (AHRD V3.3 *** A0A2U1L1Z2_ARTAN) Solyc09g014540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MLP-like protein 43 (AHRD V3.3 *** A0A2U1L1Z2_ARTAN) Solyc09g014550.3 20 13 64 22 68 72 83 98 26 18 21 48 28 32 16 MLP-like protein 43 (AHRD V3.3 *** A0A2U1L1T0_ARTAN) Solyc09g014560.2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 MLP-like protein 28 (AHRD V3.3 *-* A8MR61_ARATH) Solyc09g014565.1 0 0 0 0 0 0 0 1 0 3 7 0 2 0 0 Unknown protein Solyc09g014580.3 29 20 122 119 1 9 5 2 51 83 96 25 0 61 148 MLP-like protein 43 (AHRD V3.3 *** A0A2U1L1Z2_ARTAN) Solyc09g014590.3 11 231 15 51 34 29 23 17 62 35 101 66 66 24 28 Polygalacturonase inhibiting protein (AHRD V3.3 *** D7RJV7_CAPAN) Solyc09g014600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g014610.4 60 47 183 83 197 186 234 124 86 135 215 109 132 76 56 S-type anion channel SLAH3 (AHRD V3.3 *** A0A2G3BJK2_CAPCH) AT5G24030 Solyc09g014620.3 1759 1634 2458 1841 1871 2039 1952 1597 1831 935 2868 1574 1966 1592 3505 High mobility group protein (AHRD V3.3 *-* Q4ZH67_CUCSA) AT3G51880 Solyc09g150107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein 24-like (AHRD V3.3 *** XP_010326135.2) Solyc09g150108.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 54 (AHRD V3.3 *** A0A2G2V2K3_CAPBA) Solyc09g014640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 54 (AHRD V3.3 *** A0A1U8GST2_CAPAN) Solyc09g014641.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *** A0A1R3KEW3_9ROSI) Solyc09g014642.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g014643.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g014644.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 54 (AHRD V3.3 *-* A0A2G2V2K3_CAPBA) Solyc09g014645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 54 (AHRD V3.3 *** A0A1U8GST2_CAPAN) Solyc09g014646.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein 24-like (AHRD V3.3 *** XP_010326135.2) Solyc09g014647.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1L5V5_ARTAN) Solyc09g014648.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1L5V5_ARTAN) Solyc09g014649.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *-* A0A2U1L5V5_ARTAN) Solyc09g014690.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *-* A0A2U1L5V5_ARTAN) Solyc09g014700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *-* A0A2U1L5V5_ARTAN) Solyc09g014705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1L5V5_ARTAN) Solyc09g014710.4 14 7 0 6 4 4 7 3 7 5 5 6 14 11 0 Protein kinase domain (AHRD V3.3 *** A0A200PR58_9MAGN) AT1G21270 Solyc09g014720.3 2 0 5 10 0 6 0 0 7 9 34 0 2 12 1 Protein kinase domain (AHRD V3.3 *** A0A200PR58_9MAGN) AT1G21270 Solyc09g014730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *** A0A200Q5X3_9MAGN) AT1G21270 Solyc09g014740.3 71 37 10 39 0 0 0 0 20 11 37 9 19 23 101 Protein kinase domain (AHRD V3.3 *** A0A200Q5X3_9MAGN) AT1G21270 Solyc09g014750.1 6 0 10 0 0 1 2 0 10 0 54 7 0 4 7 Late embryogenesis abundant protein (AHRD V3.3 *** W0FHP9_9CARY) AT3G51810 Solyc09g014760.4 1003 1008 949 720 831 724 705 914 991 1005 622 858 739 846 819 Chlorophyll synthase, chloroplastic (AHRD V3.3 *** A0A2G3BKC1_CAPCH) AT3G51820 Solyc09g014765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc09g014770.3 4785 4232 3702 4243 4368 3724 4025 4950 4970 4480 3883 4130 3900 4647 5338 AMP deaminase (AHRD V3.3 *** A0A2G3BKE7_CAPCH) AT2G38280 Solyc09g014780.3 4815 4590 4326 4624 4239 5032 4885 4548 3804 3964 3868 3951 4727 4475 4121 Regulatory-associated protein of TOR 1 (AHRD V3.3 *** A0A2G2YSR6_CAPAN) AT3G08850 Solyc09g014785.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc09g014790.4 12014 5759 7325 11106 5142 4892 5894 6220 4887 9119 9539 5869 7155 8400 7564 ENTH/VHS, Target of Myb protein 1 (AHRD V3.3 *** A0A2U1Q4R9_ARTAN) AT2G38410 Solyc09g014800.3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 Protein LURP-one-related 15 (AHRD V3.3 *** A0A2G3C0S7_CAPCH) Solyc09g014805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc09g014820.3 3 0 2 0 2 1 2 2 1 3 0 2 0 0 0 Protein LURP-one-related 15 (AHRD V3.3 *** A0A2G2ZQX5_CAPAN) Solyc09g014830.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein LURP-one-related 15 (AHRD V3.3 *-* A0A2G2ZQX5_CAPAN) Solyc09g014860.3 14 3 0 15 0 0 0 0 3 2 5 0 9 9 41 Protein LURP-one-related 15 (AHRD V3.3 *** A0A2G2ZQX5_CAPAN) Solyc09g014870.1 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 Copper transporter (AHRD V3.3 *** E9LK39_VITVI) Solyc09g014890.3 482 347 334 259 245 265 346 269 241 206 220 284 272 304 302 Zincin-like metalloprotease (AHRD V3.3 *** A0A2U1NKE2_ARTAN) AT1G67690 Solyc09g014900.3 284 174 133 231 95 91 89 89 143 331 320 187 156 173 262 Cytochrome P450 (AHRD V3.3 *** A0A2U1NKI2_ARTAN) Solyc09g014910.4 56 1 0 2 0 0 0 0 0 8 0 0 0 1 0 Protein LURP-one-related 15 (AHRD V3.3 *** A0A1U8E7M0_CAPAN) Solyc09g014930.1 49 71 69 55 78 68 62 108 67 57 55 50 70 101 77 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R900_9MAGN) AT2G38420 Solyc09g014935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc09g014940.3 85 76 205 88 10 5 8 1 60 73 331 12 31 48 44 wound-induced protein 1-like (AHRD V3.3 *** A0A2I4HKI2_9ROSI) AT5G01740 Solyc09g014945.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc09g014950.2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g014970.4 83 189 242 148 65 80 71 48 462 333 402 366 537 237 412 Methylketone synthase Ib (AHRD V3.3 *** E0YCS5_SOLLC) Solyc09g014980.4 2508 2549 3249 2733 2292 2501 2635 2173 2415 2520 2797 2040 2999 2663 2497 Protein SCAR4 (AHRD V3.3 *** A0A2G3BKZ2_CAPCH) AT5G01730 Solyc09g014990.4 1089 375 998 223 48 67 73 78 168 183 1584 313 229 386 771 WRKY transcription factor 33 AT2G38470 Solyc09g014993.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 CASP-like protein (AHRD V3.3 *** A0A328E6F5_9ASTE) AT2G38480 Solyc09g150109.1 11 4 0 6 7 2 2 1 0 4 6 9 4 3 0 Unknown protein Solyc09g014997.1 0 1 9 1 2 0 0 0 2 2 0 2 3 3 10 Unknown protein Solyc09g015000.4 850 556 514 499 509 449 418 514 389 482 433 438 613 410 388 Class I heat shock protein (AHRD V3.3 *** A0A2K3KSJ8_TRIPR) Solyc09g015010.2 6 3 1 7 8 5 7 14 5 8 1 6 2 2 1 Gag-asp_proteas domain-containing protein (AHRD V3.3 *-* A0A1Q3CQ35_CEPFO) Solyc09g015020.1 72 27 59 106 61 73 68 54 78 69 71 123 44 57 48 Class I heat shock protein (AHRD V3.3 *** A0A2K3KSJ8_TRIPR) AT3G46230 Solyc09g015030.1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 Unknown protein Solyc09g015033.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LRR receptor-like serine/threonine-protein kinase isoform X1 (AHRD V3.3 *-* XP_025887648.1) Solyc09g015037.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc09g015040.1 414 324 697 368 499 640 524 388 296 276 1066 363 311 305 538 Methyltransferase (AHRD V3.3 *** Q9M005_ARATH) AT5G01710 Solyc09g015060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L4 (AHRD V3.3 *-* A0A2G2YQK1_CAPAN) Solyc09g015065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc09g015070.3 77 33 43 37 60 59 52 34 67 52 73 110 12 38 25 NAD(P)-linked oxidoreductase superfamily protein (AHRD V3.3 *** A0A2U1N452_ARTAN) AT5G01670 Solyc09g015080.3 5068 6244 4812 5450 9149 6752 6609 9262 6190 7722 4265 9590 6112 6912 3502 Patellin-6 (AHRD V3.3 *** A0A1U8EDI8_CAPAN) AT3G51670 Solyc09g015085.1 6 5 3 29 17 19 30 21 2 12 13 13 28 15 7 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic (AHRD V3.3 *-* NP_001310397.1) Solyc09g015110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I0VTB8_9ASPA) Solyc09g015120.4 520 786 654 697 735 822 826 1045 798 760 576 800 866 704 599 Kelch_1 domain-containing protein/Dev_Cell_Death domain-containing protein (AHRD V3.3 *** A0A1Q3C9I5_CEPFO) AT5G01660 Solyc09g015130.4 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 D-alanine-D-alanine ligase (AHRD V3.3 *** A0A2K3MLX6_TRIPR) Solyc09g015135.1 2 0 0 0 0 0 1 0 0 0 0 0 1 1 0 Unknown protein Solyc09g015140.2 69 48 59 49 67 64 56 25 31 35 108 65 55 69 109 ATP-dependent DNA helicase (AHRD V3.3 *** A0A2G3C774_CAPCH) Solyc09g015145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 trihelix transcription factor ASR3-like (AHRD V3.3 *-* A0A2I4FCD1_9ROSI) Solyc09g150110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc09g015160.2 0 0 0 1 0 0 0 0 0 0 0 1 0 1 10 Unknown protein Solyc09g015170.4 195 2243 1771 2905 5024 5833 6146 5346 2073 1280 1966 2873 183 1109 1200 Receptor-like kinase (AHRD V3.3 *** A0A0K9PDM5_ZOSMR) Solyc09g015180.4 1506 1344 843 1713 1330 1053 1122 1598 863 2279 796 1463 1156 1153 572 BRISC complex subunit Abro1 (AHRD V3.3 *-* A0A1D1Z4F0_9ARAE) AT3G08780 Solyc09g015190.2 33 35 61 56 73 78 71 25 19 28 57 46 29 55 53 Dehydration-responsive element-binding protein 2D (AHRD V3.3 *-* A0A2G3BKG9_CAPCH) AT2G40350 Solyc09g015200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: wall-associated receptor kinase 3-like (AHRD V3.3 *-* XP_019071082.1) Solyc09g015210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 wall-associated receptor kinase 2-like (AHRD V3.3 *-* A0A2I4DGY2_9ROSI) Solyc09g015220.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Wall-associated receptor kinase 3 (AHRD V3.3 *** A0A2G3CTB4_CAPCH) Solyc09g015223.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3JUZ2_TRIPR) Solyc09g015225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3JUZ2_TRIPR) Solyc09g015227.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Wall-associated receptor kinase (AHRD V3.3 *-* A0A200QM84_9MAGN) Solyc09g015230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Wall-associated receptor kinase 3 (AHRD V3.3 *** A0A2G3CTB4_CAPCH) AT1G21240 Solyc09g015240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Wall-associated receptor kinase 3 (AHRD V3.3 *** A0A2G3CTB4_CAPCH) AT1G21240 Solyc09g015245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A2P1N7K1_9LAMI) Solyc09g015280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf3 (AHRD V3.3 *** I6N9C3_DATST) Solyc09g015290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* A0A343TER2_9ROSA) Solyc09g015300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* A0A1I9VY46_9ERIC) Solyc09g015310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S4, chloroplastic (AHRD V3.3 *** I6N958_DATST) Solyc09g015320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I assembly protein Ycf3 (AHRD V3.3 *-* H6T9Q1_MOLVE) Solyc09g015330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S4, chloroplastic (AHRD V3.3 *** I6N958_DATST) Solyc09g015340.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* A0A2P1M807_9LAMI) Solyc09g015350.4 0 10 2 4 14 8 12 7 6 3 2 6 2 1 3 Protein trichome birefringence-like 34 (AHRD V3.3 *** A0A2G3BM77_CAPCH) AT2G38320 Solyc09g015360.4 164 362 371 321 424 405 423 314 376 207 388 250 350 297 375 Chaperone protein DnaJ (AHRD V3.3 *** A0A1J3HP96_NOCCA) AT5G59610 Solyc09g015370.1 6 15 14 16 39 18 15 13 15 12 2 12 18 20 23 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R528_9MAGN) Solyc09g015380.1 7 5 11 11 0 0 1 2 6 5 7 1 0 3 0 Abscisic acid receptor PYL5 (AHRD V3.3 *** A0A1U8EIS0_CAPAN) AT2G38310 Solyc09g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc09g015420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (Protein of unknown function%2C DUF538) (AHRD V3.3 *** AT3G08890.2) Solyc09g015430.3 3 2 20 14 11 5 7 2 6 6 8 11 3 4 13 Unknown protein Solyc09g015440.1 2 0 8 1 1 7 13 6 7 1 4 15 11 2 0 GDT1-like protein 3 (AHRD V3.3 *** A0A2G3B0H6_CAPCH) Solyc09g015450.3 90 15 19 9 29 46 35 21 6 15 4 10 18 35 54 hypothetical protein (AHRD V3.3 --* AT3G51750.3) AT3G51750 Solyc09g015453.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MRD5_TRIPR) ATMG00240 Solyc09g015457.1 66 42 27 87 74 74 102 86 47 77 43 95 25 46 12 Unknown protein Solyc09g015460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycine cleavage T-protein family (AHRD V3.3 *-* AT1G60990.3) Solyc09g015470.4 193 251 199 275 185 219 212 151 171 226 225 227 164 217 266 Protein TIC 56, chloroplastic (AHRD V3.3 *** A0A1U8F621_CAPAN) AT5G01590 Solyc09g150112.1 68 21 71 63 61 66 69 41 27 81 114 49 19 50 14 F-box-like/WD repeat-containing protein TBL1XR1 (AHRD V3.3 *-* A0A1U8EY19_CAPAN) Solyc09g015490.3 401 253 315 302 273 323 282 212 193 287 382 227 140 256 564 Phosphoenolpyruvate carboxylase (AHRD V3.3 *-* Q6Q2Z9_SOYBN) Solyc09g015500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box-like/WD repeat-containing protein TBL1XR1 (AHRD V3.3 *-* A0A1U8EY19_CAPAN) Solyc09g150113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aspartic proteinase-like protein 1 (AHRD V3.3 *-* A0A2G2ZQ92_CAPAN) Solyc09g015520.3 436 1233 1082 1139 1420 1472 1157 1400 1324 1037 1079 1352 942 1308 1107 Leucine-rich repeat receptor-like protein kinase PXC2 (AHRD V3.3 *** A0A1U8ED78_CAPAN) Solyc09g015530.3 287 374 426 321 327 293 314 294 349 283 278 267 482 402 329 transmembrane protein (AHRD V3.3 *** AT3G51580.1) AT3G51580 Solyc09g015535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc09g015580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G3AFL7_CAPAN) Solyc09g015585.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015600.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G2XLB4_CAPBA) Solyc09g015610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G2XLB4_CAPBA) Solyc09g015615.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc09g015630.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chlorophyllide a oxygenase, chloroplastic (AHRD V3.3 *-* A0A2G2WY32_CAPBA) Solyc09g015650.4 4106 3225 5132 3691 2955 3279 3148 2416 2891 2768 3796 3188 2790 3528 4034 Non-green plastid inner envelope membrane protein (AHRD V3.3 *** B6T177_MAIZE) AT2G38550 Solyc09g015660.4 275 180 184 231 260 251 183 238 300 152 218 253 261 263 220 transcription factor GTE6-like (AHRD V3.3 *** A0A2I4FB19_9ROSI) Solyc09g015670.3 1909 1301 1299 1417 999 1167 927 1136 3414 2580 2729 2598 1500 1733 1643 Vacuolar sorting receptor protein (AHRD V3.3 *** C6KI57_LILLO) AT3G52850 Solyc09g015700.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015705.1 11 1 6 4 2 2 2 2 2 1 0 2 4 2 1 Unknown protein Solyc09g015730.1 4 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Transmembrane 9 superfamily member (AHRD V3.3 *-* A0A2G2YW13_CAPAN) Solyc09g015770.3 12673 5863 6979 1931 342 410 612 252 1791 3957 9978 1044 13894 6760 4895 WRKY transcription factor 81 Solyc09g015780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3CLP4_CEPFO) Solyc09g015820.3 517 378 528 365 396 431 456 417 323 410 584 374 408 374 426 Thioredoxin (AHRD V3.3 *** A0A2I4E4S6_9ROSI) AT3G08710 Solyc09g015830.3 1659 1592 2647 1679 1711 1808 1780 1465 1854 1644 2836 1731 1597 1617 1194 Receptor protein kinase-like protein (AHRD V3.3 *** Q8VZH5_CAPAN) AT3G51550 Solyc09g015840.4 675 808 722 560 692 545 499 999 984 1101 674 915 522 494 346 receptor-like protein kinase FERONIA (AHRD V3.3 *-* A0A2I4E4Q0_9ROSI) Solyc09g015850.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC) Solyc09g015860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L16 (AHRD V3.3 *** A0A290WKW7_SOLLC) ATMG00080 Solyc09g015880.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *** A0A2G3CEU1_CAPCH) Solyc09g015890.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g015930.3 2937 2752 2230 2319 2394 2066 2028 2498 1896 2466 1845 2207 2404 2732 1716 RNA helicase DEAD28 Solyc09g016930.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A075ELF0_9MAGN) Solyc09g016940.4 523 529 729 613 539 657 615 430 600 403 902 546 834 757 803 binder of USO1 and GRH1 protein 1 isoform X9 (AHRD V3.3 *** A0A2I4EIZ1_9ROSI) AT2G38580 Solyc09g016950.3 1342 873 679 895 687 683 734 641 709 723 591 776 627 892 771 Unknown protein Solyc09g016955.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin carboxyl-terminal hydrolase 20-like (AHRD V3.3 --* XP_010326111.1) Solyc09g017980.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin carboxyl-terminal hydrolase 20-like (AHRD V3.3 *-* A0A2I4EDU2_9ROSI) Solyc09g017990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *** A0A2G2XLB4_CAPBA) Solyc09g018000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc09g018010.3 1761 5606 5155 5622 4424 5337 5734 4326 5741 3760 7495 5830 4360 3811 3754 Non-specific lipid-transfer protein (AHRD V3.3 *** M0ZNZ5_SOLTU) AT2G38540 Solyc09g018020.3 28 82 70 50 11 23 12 23 105 82 386 108 74 55 54 Expansin (AHRD V3.3 *** K4CS69_SOLLC) Solyc09g018030.4 210 238 371 252 247 268 275 219 250 245 273 271 272 255 204 MACPF domain-containing protein (AHRD V3.3 *** A0A1Q3CAN4_CEPFO) Solyc09g018060.4 837 413 438 484 338 365 337 302 336 554 549 508 371 402 500 MAP kinase kinase kinase 69 Solyc09g018070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A2U1M0L9_ARTAN) AT2G38510 Solyc09g018080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein DETOXIFICATION 53 (AHRD V3.3 *-* XP_019071047.2) Solyc09g018130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 091 AT1G49770 Solyc09g018140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g018150.1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor149 AT1G49770 Solyc09g018160.3 728 575 303 511 443 460 450 504 437 582 364 501 477 472 394 PAP/OAS1 substrate-binding domain superfamily (AHRD V3.3 *** F4J4G2_ARATH) AT3G51620 Solyc09g018170.4 635 385 306 531 56 50 65 45 109 123 141 55 406 320 625 MAP kinase kinase kinase 70 AT3G51630 Solyc09g018180.3 0 0 0 3 0 0 0 0 0 2 0 0 0 0 0 Unknown protein Solyc09g018185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein 24-like (AHRD V3.3 *** XP_010326135.2) Solyc09g018200.1 39 16 0 4 77 56 42 52 7 2 11 8 1 11 2 ovate family protein 17 Solyc09g018205.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc09g018210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4GCM5_9ROSI) Solyc09g018215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 (AHRD V3.3 *-* A0A2G2Y3Y2_CAPAN) Solyc09g018220.3 129 111 117 108 103 77 105 58 125 163 205 102 152 117 275 Tobacco mosaic virus resistance-2 Solyc09g018230.1 98 75 148 78 28 39 48 31 85 42 218 48 46 69 133 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3C1I1_CAPCH) AT5G01830 Solyc09g018233.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3JSN7_NOCCA) Solyc09g018235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc09g018237.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc09g018250.2 32 9 22 20 15 16 9 9 13 12 11 6 14 11 5 RNA polymerase II degradation factor-like protein (DUF1296) (AHRD V3.3 --* AT1G29370.1) Solyc09g018260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine proteinase 15A (AHRD V3.3 *-* A0A1U8EZ26_CAPAN) Solyc09g018280.1 3510 2100 1939 1605 370 437 378 394 914 1072 1575 1014 2923 1720 2054 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G3DDH8_CAPCH) AT5G01820 Solyc09g018285.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc09g018310.4 1222 1091 735 881 922 1028 922 1007 1040 1037 911 932 1035 1005 1005 stress response NST1-like protein (AHRD V3.3 *** AT3G51650.4) AT3G51640 Solyc09g018320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g018330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g018340.2 187 170 125 183 217 178 224 320 259 272 157 239 116 227 122 ARM repeat superfamily protein (AHRD V3.3 *-* A0A2U1MSZ7_ARTAN) Solyc09g018370.4 1204 945 898 1062 1090 1091 1207 955 980 982 1153 990 803 1114 1050 ARM repeat superfamily protein (AHRD V3.3 *** AT5G27970.1) AT5G27970 Solyc09g018373.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 MADS-box protein (AHRD V3.3 --* I1N4Q7_SOYBN) Solyc09g018375.1 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 agamous-like MADS-box protein AGL66 (AHRD V3.3 *-* XP_021912761.1) Solyc09g018377.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-cell enriched with leucine-rich repeat-containing protein slrA-like (AHRD V3.3 *-* XP_025888839.1) Solyc09g018410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20-oxidase (AHRD V3.3 *-* F2YRP3_CAPAN) Solyc09g018420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20 oxidase 2 (AHRD V3.3 *-* A0A1U8G9M2_CAPAN) Solyc09g018440.2 101 249 347 359 713 730 606 752 472 367 376 419 315 220 214 gamma-interferon-inducible lysosomal thiol reductase-like (AHRD V3.3 *-* A0A2I4F2F4_9ROSI) Solyc09g018450.3 4512 5923 4296 4364 5411 5496 5223 6451 5230 5081 3427 4950 5938 5947 4170 Ubiquitin activating enzyme E1 (AHRD V3.3 *** G1FER0_CAMSI) Solyc09g018460.1 31 17 17 11 12 9 10 3 6 36 5 17 31 45 53 GRAS5 Solyc09g018480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase-like protein (AHRD V3.3 *-* W7U8L5_9STRA) Solyc09g018490.4 44 36 7 38 70 38 37 37 7 26 33 19 17 23 59 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A1J3KAA6_NOCCA) AT3G51710 Solyc09g018500.3 15 47 16 35 34 41 39 19 53 13 25 12 36 16 3 transcription factor SCREAM2-like (AHRD V3.3 *** A0A2I4ECP9_9ROSI) Solyc09g018510.3 640 724 880 918 1157 1184 1203 1137 949 757 781 936 699 714 716 Phytol kinase (AHRD V3.3 *** A0A2K3MZ75_TRIPR) AT5G58560 Solyc09g018520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD repeat-containing protein 3-like protein (AHRD V3.3 *-* A0A1J3DHE0_NOCCA) Solyc09g018530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD repeat-containing protein 3-like (AHRD V3.3 *-* A0A2K3L072_TRIPR) Solyc09g018550.1 31 24 15 12 20 20 27 22 32 19 54 27 36 36 22 Unknown protein Solyc09g018555.1 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** A0A0G2R7W6_MESCR) Solyc09g018590.1 1 1 0 5 12 18 12 22 0 4 1 4 0 0 0 Peroxidase (AHRD V3.3 *** M1CIW6_SOLTU) Solyc09g018595.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc09g018600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** A0A2P5RMA3_GOSBA) Solyc09g018610.1 72 115 145 188 210 225 215 166 158 91 142 145 90 125 150 Unknown protein Solyc09g018620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g018630.3 436 352 458 465 391 364 454 273 367 336 327 348 455 434 487 Bis(5'-adenosyl)-triphosphatase (AHRD V3.3 *-* A0A2G2YRX6_CAPAN) Solyc09g018650.3 355 393 346 356 346 300 348 450 304 512 243 471 399 394 202 bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT (AHRD V3.3 *-* A0A2I4EFS8_9ROSI) Solyc09g018670.3 623 486 766 542 606 679 624 466 487 597 722 580 536 534 586 TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (AHRD V3.3 *** AT4G10360.3) AT4G10360 Solyc09g018680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g018690.4 475 342 387 404 227 364 382 281 309 214 376 269 350 418 544 ATP-dependent DNA helicase (AHRD V3.3 *** A0A2G2YTX4_CAPAN) Solyc09g018710.2 59 54 43 38 41 62 37 45 59 37 27 31 38 40 28 ATP-dependent DNA helicase (AHRD V3.3 *-* A0A2G2YTX4_CAPAN) Solyc09g018720.3 160 157 159 78 110 96 112 152 154 147 100 115 149 131 128 Unknown protein Solyc09g018730.4 1449 1516 1692 1357 1560 1397 1473 1464 1396 1433 1396 1474 1539 1427 1554 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** A0A1U8E1K2_CAPAN) AT1G65650 Solyc09g018740.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g018750.3 5401 3948 4426 3917 5538 6183 5883 6097 4461 5537 5411 4778 3702 4125 4306 CBS domain protein (AHRD V3.3 *** A0A2K3NEI1_TRIPR) AT5G10860 Solyc09g018755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g018760.2 66 66 44 37 8 7 4 11 33 56 23 50 82 68 48 Oligoribonuclease (AHRD V3.3 *** A0A2G2ZEC5_CAPAN) Solyc09g018780.4 91 72 143 115 19 19 14 26 42 71 110 52 124 106 159 Oligoribonuclease (AHRD V3.3 *-* A0A2G2ZEC5_CAPAN) Solyc09g018790.3 1972 3205 2789 2590 3208 3290 2957 3637 3291 2887 2207 3556 3515 3258 2461 Succinic semialdehyde reductase isofom1 AT3G25530 Solyc09g018800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* J7H3U2_CAPAN) Solyc09g150114.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc09g018805.1 11 23 17 28 38 21 29 27 18 40 17 29 31 28 14 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 --* A0A1J3IMV5_NOCCA) Solyc09g150115.1 13 21 36 16 0 7 20 6 14 14 25 20 17 17 7 Unknown protein Solyc09g018830.2 906 647 684 985 706 814 939 618 543 778 765 679 523 708 927 MLO-like protein (AHRD V3.3 *** M1BT43_SOLTU) Solyc09g018850.3 253 297 322 296 378 397 380 385 311 227 243 340 214 341 173 A/G-specific adenine DNA glycosylase (AHRD V3.3 *** A0A2G3BL05_CAPCH) AT4G12740 Solyc09g018890.3 312 319 177 279 401 383 394 258 241 334 351 264 291 161 187 DUF2996 family protein (AHRD V3.3 *-* AT2G04039.1) AT2G04039 Solyc09g018900.3 49 23 23 12 59 46 65 44 23 45 31 28 44 23 11 Unknown protein Solyc09g018930.1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 Unknown protein Solyc09g018950.3 236 232 375 326 373 480 480 313 242 206 380 288 310 396 366 RPA-interacting protein A (AHRD V3.3 *** AT4G12760.1) AT4G12760 Solyc09g018960.4 1055 1600 1599 1331 1649 1535 1540 1728 1887 1416 1576 1398 1405 1660 1463 Chaperone DnaJ-domain superfamily protein (AHRD V3.3 *-* A0A1P8B6Z5_ARATH) AT4G12780 Solyc09g018970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein NETWORKED 3A (AHRD V3.3 *-* A0A2G3CXR8_CAPCH) Solyc09g019970.3 2098 1786 1427 1440 1309 1458 1481 1589 1506 1668 1182 1671 1516 1547 1335 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** S8E5A0_9LAMI) AT2G40930 Solyc09g019980.3 300 329 425 193 267 272 182 314 268 397 318 243 328 233 125 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A2I4EFQ3_9ROSI) AT3G07570 Solyc09g019990.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc09g020000.3 871 845 792 685 644 618 687 730 634 775 597 642 882 767 566 DUF3755 domain-containing protein (AHRD V3.3 *** A0A1Q3BKP1_CEPFO) AT3G07565 Solyc09g020010.2 334 221 128 149 225 148 180 202 228 181 144 151 165 152 301 Mediator of RNA polymerase II transcription subunit 19a (AHRD V3.3 *-* A0A1U8E3C3_CAPAN) AT5G12230 Solyc09g020013.1 45 39 48 24 38 14 22 8 30 36 95 34 27 36 52 Unknown protein Solyc09g020017.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc09g020110.3 1698 1046 1081 941 802 759 700 755 963 1359 919 924 1089 1049 1328 T2-type RNase (AHRD V3.3 *** A0AQW5_SOLLC) AT2G39780 Solyc09g020120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *-* A0A2I0XE44_9ASPA) Solyc09g020130.3 4868 5882 5307 3796 5355 4324 4233 4830 4473 4099 3691 4402 5982 5336 4095 60S ribosomal protein L5-like (AHRD V3.3 *** A0A2I4G950_9ROSI) AT3G25520 Solyc09g020140.3 1987 1564 1657 1276 1219 1067 1193 1083 1207 1903 1230 1056 2246 1686 1366 GPN-loop GTPase 3 (AHRD V3.3 *** A0A2G3BMR6_CAPCH) AT4G12790 Solyc09g020150.4 183 174 115 133 203 194 165 164 132 145 111 178 113 216 197 hypothetical protein (AHRD V3.3 *** AT5G48340.4) AT5G48340 Solyc09g020160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UB-like protease 1B (AHRD V3.3 --* AT4G00690.1) Solyc09g020190.3 1646 798 702 738 534 448 400 454 743 1151 701 621 903 830 722 Non-specific phospholipase C1 (AHRD V3.3 *** A0A2G2YK91_CAPAN) AT1G07230 Solyc09g020195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g037020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase (AHRD V3.3 *-* A0A2U1MN94_ARTAN) Solyc09g037030.2 9 6 4 7 4 2 5 3 6 3 1 4 0 3 13 Sister-chromatid cohesion protein 3 (AHRD V3.3 *-* A0A2G3B9G7_CAPCH) Solyc09g037040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase (AHRD V3.3 *-* B3TM26_ELAGV) Solyc09g037050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sister-chromatid cohesion protein 3 (AHRD V3.3 *-* A0A2G2V420_CAPBA) Solyc09g037060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase 2 (AHRD V3.3 --* ADH2_SOLLC) Solyc09g037070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sister-chromatid cohesion protein 3 (AHRD V3.3 *-* A0A2G3B9G7_CAPCH) Solyc09g037080.3 1 0 0 0 0 0 3 1 1 0 0 0 0 0 1 Unknown protein Solyc09g037090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase 1 (AHRD V3.3 --* ADH1_SOLTU) Solyc09g037095.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alcohol dehydrogenase 1 (AHRD V3.3 *-* A0A2G2Z9W5_CAPAN) Solyc09g037130.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g037135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 integrator complex subunit 9 homolog isoform X1 (AHRD V3.3 *-* XP_010318312.1) Solyc09g037120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g037140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g037150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g037170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *-* A0A2U1PY61_ARTAN) Solyc09g037180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g037185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc09g040190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone H2B (AHRD V3.3 --* XP_006383343.1) Solyc09g042200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone H2B.3 (AHRD V3.3 --* NP_001333220.1) Solyc09g042210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20-oxidase (AHRD V3.3 *-* F2YRP3_CAPAN) Solyc09g042230.2 4 2 25 5 4 0 0 1 2 4 3 2 1 3 19 pentatricopeptide repeat-containing protein At5g16640, mitochondrial (AHRD V3.3 --* XP_010109661.1) Solyc09g042250.2 98 116 130 94 105 72 88 76 78 97 58 106 97 99 76 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R3P0_9MAGN) Solyc09g042260.3 1410 1261 1178 1330 1058 1188 1128 974 1139 1249 1431 1270 1478 1297 1550 Protein kinase domain (AHRD V3.3 *** A0A200R3J7_9MAGN) AT3G08760 Solyc09g150120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nucleic acid-binding, OB-fold protein (AHRD V3.3 *-* A0A2U1MU10_ARTAN) Solyc09g150121.1 0 0 2 1 0 0 0 1 1 0 0 0 0 2 0 Protein BTR1 (AHRD V3.3 *-* A0A2G2VF13_CAPBA) Solyc09g042280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance protein (AHRD V3.3 *-* A0A2U1LYL9_ARTAN) Solyc09g042290.3 0 1 1 0 0 0 0 0 0 0 2 0 0 1 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1LWS3_ARTAN) Solyc09g042300.2 0 0 0 3 0 0 0 0 0 0 0 2 1 0 0 Pleiotropic drug resistance protein (AHRD V3.3 *-* A0A2U1LYL9_ARTAN) Solyc09g150122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein ZINC INDUCED FACILITATOR-LIKE 1-like (AHRD V3.3 *-* A0A2I4H204_9ROSI) Solyc09g042330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042480.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING-finger%2C DEAD-like helicase%2C PHD and SNF2 domain-containing protein (AHRD V3.3 *-* AT2G40770.3) Solyc09g042510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042650.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042660.4 213 71 105 101 68 116 74 65 55 45 68 68 58 47 84 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0MNK8_POPTR) Solyc09g042665.1 6 6 0 2 3 1 2 9 3 0 0 4 3 1 0 Unknown protein Solyc09g042670.4 1 4 11 5 0 0 1 0 1 3 31 6 5 0 2 Unknown protein Solyc09g042673.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042677.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor DIVARICATA (AHRD V3.3 *-* A0A2I0XIS0_9ASPA) Solyc09g042690.2 2 0 2 0 3 3 1 0 0 0 0 1 0 0 0 Unknown protein Solyc09g042700.4 632 320 247 364 210 229 174 203 277 373 336 212 328 265 236 proactivator polypeptide-like 1 (AHRD V3.3 *** A0A2I4EIU6_9ROSI) AT3G51730 Solyc09g042705.1 0 0 0 0 0 0 0 0 4 3 0 3 0 0 0 Unknown protein Solyc09g061400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 sentrin-specific protease 1-like (AHRD V3.3 -** XP_006480104.2) Solyc09g042710.3 254 1038 1122 1161 2449 2227 2035 2869 1741 870 1148 1820 473 801 490 Weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 *** A0A1P8AX38_ARATH) AT2G38370 Solyc09g042720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A1U8FV93_CAPAN) Solyc09g042723.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g042725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) ATMG00240 Solyc09g042727.1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 Unknown protein Solyc09g042740.4 773 818 868 1162 972 825 963 1046 1023 1305 999 882 846 951 825 Formin-like protein (AHRD V3.3 *** A0A1U8E5Q7_CAPAN) AT3G25500 Solyc09g042750.3 1414 1823 1327 1532 1959 1614 1577 2150 1638 1876 930 1681 1840 1760 1076 Acyl-coenzyme A thioesterase 9, mitochondrial (AHRD V3.3 *** A0A1J3CD94_NOCCA) AT5G48370 Solyc09g150123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc09g042760.2 2 20 16 25 25 27 39 32 14 11 22 15 4 23 1 TPR repeat-containing protein ZIP4 (AHRD V3.3 *** A0A1U8ECV0_CAPAN) AT5G48390 Solyc09g042770.4 643 945 1138 1133 1081 1050 1050 987 991 900 925 943 957 1036 816 Rhodanese-like domain-containing protein 4A, chloroplastic (AHRD V3.3 *** A0A2G2X1L1_CAPBA) AT3G25480 Solyc09g042780.2 632 405 359 478 318 300 346 239 367 477 442 383 389 446 416 Unknown protein Solyc09g042790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 phosphatidylinositol 4-phosphate 5-kinase 5-like (AHRD V3.3 --* XP_022858267.1) Solyc09g042800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g031970.3 1294 1934 1687 1758 2199 1902 1800 2422 2577 1996 1575 2076 1845 2114 2098 Alpha-1,4 glucan phosphorylase (AHRD V3.3 *** A0A1U8E418_CAPAN) AT3G46970 Solyc09g031960.1 11 5 6 0 1 2 0 0 1 1 4 2 2 4 17 Unknown protein Solyc09g031950.3 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 Villin-4 (AHRD V3.3 *-* A0A2G3BHK0_CAPCH) Solyc09g031940.1 893 1160 903 1169 866 718 616 953 1160 1204 739 1611 1189 1301 775 protein RETICULATA-RELATED 3, chloroplastic-like (AHRD V3.3 *** A0A2I4E4T7_9ROSI) AT3G08640 Solyc09g031930.3 589 648 527 542 530 509 480 399 537 371 484 399 596 530 620 KH domain-containing protein (AHRD V3.3 *** A0A2G2V929_CAPBA) AT2G38610 Solyc09g031920.1 444 571 440 376 341 360 290 300 373 363 508 389 559 464 437 Late embryogenesis abundant protein, LEA-14 (AHRD V3.3 *** A0A2U1NFB4_ARTAN) AT3G54200 Solyc09g031910.2 0 0 4 3 3 2 2 0 1 0 0 0 0 5 8 Unknown protein Solyc09g031900.4 843 622 691 612 648 754 611 692 600 927 736 724 419 508 428 hypothetical protein (AHRD V3.3 --* AT2G28330.1) Solyc09g031890.3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Galacturonic acid kinase (AHRD V3.3 *-* A0A2U1KZV2_ARTAN) Solyc09g031880.3 0 2 0 7 6 1 6 0 4 1 0 5 0 1 2 Galacturonokinase (AHRD V3.3 *** A0A2G2WB90_CAPBA) Solyc09g031870.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ADP-ribosylation factor-like protein 2 (AHRD V3.3 *-* A0A1U8EKF4_CAPAN) Solyc09g150119.1 21 17 44 11 0 10 2 3 4 53 30 12 48 42 23 Cytochrome P450 (AHRD V3.3 *-* A0A200QZM5_9MAGN) Solyc09g031850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* F6KG94_JACVU) Solyc09g031840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc09g031830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A075TVZ1_9ERIC) Solyc09g031820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc09g031810.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc09g031800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* G3LV81_9SOLA) Solyc09g031790.4 251 324 210 350 440 529 451 413 320 213 419 369 185 242 345 Structure-specific endonuclease subunit SLX1 homolog (AHRD V3.3 *** A0A2G2XHX7_CAPBA) AT2G30350 Solyc09g031780.3 3065 4179 2924 3419 3491 3153 3451 4373 3549 3010 2458 3208 3195 4037 3126 Protein, chloroplastic (AHRD V3.3 *** A0A2G2XVT4_CAPAN) AT1G06950 Solyc09g031770.3 47 43 49 55 43 54 47 40 35 36 12 28 37 38 45 Josephin-like protein (AHRD V3.3 *** A0A2G2XRT5_CAPBA) Solyc09g031760.1 2 10 35 13 9 11 9 7 13 8 11 19 38 14 9 Ribosomal protein L19 (AHRD V3.3 *-* A0A2G2Z6J3_CAPAN) Solyc09g031750.4 1102 595 602 809 588 656 747 576 731 842 571 785 507 578 757 Phosphate transporter (AHRD V3.3 *** A0A2H4H6T0_MALDO) AT2G29650 Solyc09g031700.4 275 371 264 259 407 278 248 405 418 414 207 431 437 371 200 Phosphate transporter (AHRD V3.3 *** A0A2H4H6T2_MALDO) AT3G46980 Solyc09g150118.1 8 6 10 18 24 20 19 11 9 8 11 10 11 14 8 Unknown protein Solyc09g031680.3 97 136 143 169 218 158 154 178 152 150 114 165 153 148 109 Mitochondrial uncoupling protein (AHRD V3.3 *** O24391_SOLTU) Solyc09g031650.3 6541 7560 3857 5884 6647 5195 6455 9921 6018 8011 4693 7072 6347 7735 3749 Mediator of RNA polymerase II transcription subunit 12-like protein (AHRD V3.3 *-* A0A2K3MW60_TRIPR) Solyc09g031655.1 63 27 40 32 14 32 31 19 49 32 9 40 19 31 15 Unknown protein Solyc09g031640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g031630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g031620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g031610.4 2217 1734 1202 1321 1459 1477 1310 1597 1469 1550 1008 1666 1409 1681 1027 DAMAGED DNA BINDING PROTEIN1 AT5G58760 Solyc09g031600.2 1132 1146 984 1053 1057 909 854 1503 1157 1417 704 1273 1003 1101 743 Sorting nexin 2A (AHRD V3.3 *** A0A2G3BLH8_CAPCH) AT5G07120 Solyc09g031590.4 26 21 72 48 24 59 51 28 27 24 34 21 36 61 55 Sorting nexin 2B (AHRD V3.3 *-* A0A1J3ET74_NOCCA) Solyc09g031595.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc09g031580.3 1953 1270 1065 1139 933 1105 1122 1152 1382 1428 851 1127 978 1245 1082 Zinc finger, RING-type (AHRD V3.3 *** A0A1R3IP44_COCAP) AT5G58610 Solyc09g031570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cellulose synthase (AHRD V3.3 *-* K4BTR6_SOLLC) Solyc09g031573.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g031577.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 7 (AHRD V3.3 *-* A0A290WKY4_SOLLC) Solyc09g031550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 7 (AHRD V3.3 *-* G8E8R9_9CARY) Solyc09g031540.1 9 1 0 0 1 5 7 1 0 0 7 0 0 0 0 Unknown protein Solyc09g031543.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g150117.1 18 13 37 27 28 9 18 14 4 34 2 10 10 24 9 Unknown protein Solyc09g031510.1 0 0 3 3 0 0 0 1 0 1 0 0 1 0 0 Unknown protein Solyc09g031513.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc09g031517.1 2163 2012 2252 2594 2169 2379 2426 2368 2075 2615 2938 2148 1492 1725 1722 Flocculation protein flo11-like (AHRD V3.3 *-* A0A2K3PPL6_TRIPR) AT3G08670 Solyc09g030510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g030515.1 0 0 0 0 0 0 0 0 0 1 0 1 2 1 0 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3HQQ3_COCAP) Solyc09g031528.1 0 0 2 1 1 1 1 0 0 0 0 0 2 3 0 D-alanine--D-alanine ligase (AHRD V3.3 *-* A0A200QQE9_9MAGN) Solyc09g030470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g030460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g030450.3 593 586 1065 818 661 468 537 551 784 1037 1135 771 827 596 721 Receptor-like kinase (AHRD V3.3 *** G7K0V8_MEDTR) Solyc09g030455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Amine oxidase (AHRD V3.3 *-* A0A2G2ZVI0_CAPAN) Solyc09g030390.3 6358 5867 4905 4407 5311 4718 4647 5824 4840 4862 4574 5189 4716 5115 4809 Serine/arginine repetitive matrix protein 1 (AHRD V3.3 *-* A0A2G2VYQ2_CAPBA) AT2G29210 Solyc09g030380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g150116.1 142 119 144 123 90 88 94 82 70 77 103 126 91 93 131 Unknown protein Solyc09g030370.3 19 3 1 16 4 3 10 2 12 14 22 9 16 6 2 GDSL esterase/lipase (AHRD V3.3 *** A0A1U8E6M9_CAPAN) AT2G30310 Solyc09g030375.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g030360.3 267 240 387 276 222 336 285 245 245 252 387 181 323 290 316 Unknown protein Solyc09g047840.3 210 154 237 270 326 272 238 205 188 191 331 213 141 219 238 Ubiquitin-like-conjugating enzyme ATG10 (AHRD V3.3 *** A0A1J3CRG5_NOCCA) AT3G07525 Solyc09g047860.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Dimer_Tnp_hAT domain-containing protein (AHRD V3.3 *** A0A1Q3CJ75_CEPFO) Solyc09g047870.4 307 194 177 138 212 177 137 214 205 237 158 218 162 218 226 23S rRNA (Cytidine1920-2'-O)/16S rRNA (Cytidine1409-2'-O)-methyltransferase (AHRD V3.3 *** A0A2I0WJW4_9ASPA) AT3G25470 Solyc09g047900.2 282 242 203 297 287 287 293 219 256 207 200 211 246 251 254 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q8VZ57_ARATH) AT4G12830 Solyc09g047910.4 52 23 44 21 6 14 16 10 22 36 23 26 60 33 65 Lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707) (AHRD V3.3 *** A0A1P8B5N9_ARATH) AT4G12840 Solyc09g047920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Mitogen-activated protein kinase kinase kinase YODA (AHRD V3.3 *-* A0A2G2X0X1_CAPBA) Solyc09g047930.1 153 268 265 262 259 282 263 189 192 227 192 267 224 214 194 Maternal effect embryo arrest protein (AHRD V3.3 *** Q94K16_ARATH) AT3G07510 Solyc09g047935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g048970.3 89 132 205 156 193 178 234 146 148 105 201 159 71 187 125 DNA-directed RNA polymerase V subunit 7 (AHRD V3.3 *** A0A1U8FSY3_CAPAN) Solyc09g048980.4 69 196 347 280 374 384 389 353 300 143 459 262 161 256 232 BTB domain-containing protein/NPH3 domain-containing protein (AHRD V3.3 *** A0A1Q3D396_CEPFO) AT3G08570 Solyc09g048990.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 V-type proton ATPase subunit E (AHRD V3.3 *** A0A1U8E225_CAPAN) Solyc09g050020.3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 Cytochrome b (AHRD V3.3 *** A0A2G3ASE3_CAPCH) Solyc09g050030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S14 (AHRD V3.3 *** K4CT01_SOLLC) Solyc09g050040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L5 (AHRD V3.3 *** A0A290WL59_SOLLC) ATMG00210 Solyc09g050050.2 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 OR338 (AHRD V3.3 --* R4IUB8_VICFA) Solyc09g050060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* M1AFD2_SOLTU) Solyc09g050061.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g050062.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *** I6N988_DATST) ATCG00740 Solyc09g050063.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S11, chloroplastic (AHRD V3.3 *** G9FCH9_9LAMI) ATCG00750 Solyc09g050064.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 50S ribosomal protein L14, chloroplastic (AHRD V3.3 *** I6N992_DATST) ATCG00780 Solyc09g050065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L16, chloroplastic (AHRD V3.3 *** J7H6Z8_CAPAN) Solyc09g050066.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 30S ribosomal protein S3, chloroplastic (AHRD V3.3 *** A0A2U8XH96_WEIFL) Solyc09g050067.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2 (AHRD V3.3 *-* H6T990_9CARY) Solyc09g050068.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2, chloroplastic (AHRD V3.3 *** I6N9C2_DATST) Solyc09g050069.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A0U2L2P8_9MYRT) Solyc09g050070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *** A0A2P1N7K1_9LAMI) Solyc09g055120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* K4D288_SOLLC) Solyc09g055130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* A0A1S3YNH2_TOBAC) Solyc09g055140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* K4D288_SOLLC) Solyc09g055150.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* K4D288_SOLLC) Solyc09g055180.4 684 340 510 390 188 214 211 247 664 561 545 422 435 531 528 Protein kinase domain (AHRD V3.3 *** A0A200Q8Z3_9MAGN) AT5G01950 Solyc09g055185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-directed DNA polymerase (AHRD V3.3 *-* A0A2I0W698_9ASPA) Solyc09g055200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055230.3 1873 1303 1497 1628 1259 1491 1618 1449 1532 1625 1720 1634 974 1227 1683 Double Clp-N motif-containing protein (AHRD V3.3 *** A0A2U1PA10_ARTAN) AT2G29970 Solyc09g055250.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reticulon-like protein (AHRD V3.3 *** A0A2G2VCR3_CAPBA) Solyc09g055260.4 1902 1456 1108 1390 1048 1250 1193 1253 1307 1483 1073 1193 1398 1491 1370 E3 ubiquitin-protein ligase listerin (AHRD V3.3 *** A0A2I4FA41_9ROSI) AT5G58410 Solyc09g055265.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055310.3 860 849 825 881 1033 1006 1043 967 1005 1207 922 939 968 978 731 Ethylene-overproduction protein 1 (AHRD V3.3 *** A0A2G3BLY9_CAPCH) Solyc09g055320.1 37 5 32 29 4 17 18 24 17 17 15 12 29 32 6 Unknown protein Solyc09g055330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055340.4 2162 1699 1469 1249 1595 1423 1520 1737 1512 1768 1127 1687 1338 1415 1273 MAU2 chromatid cohesion factor homolog (AHRD V3.3 *** A0A2I4EFQ8_9ROSI) AT5G51340 Solyc09g055350.3 1352 1053 1075 1047 1067 1129 1200 1120 1122 1037 821 956 968 1119 1168 ABC transporter ATP-binding protein (AHRD V3.3 *** A0A1Y1IJM1_KLENI) AT5G58270 Solyc09g055420.1 0 1 5 0 0 0 0 0 0 0 0 1 0 2 3 Nucleoside diphosphate kinase (AHRD V3.3 *** A0A1U8EKT2_CAPAN) Solyc09g055425.2 16 5 2 6 0 1 0 0 0 9 0 0 15 3 0 Leucine-rich repeat protein kinase family protein, putative (AHRD V3.3 *-* A0A061F7S3_THECC) Solyc09g055427.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055460.3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L20 (AHRD V3.3 *-* A0A2G2XDQ1_CAPBA) Solyc09g055470.1 4 10 12 7 3 4 8 6 7 10 17 5 12 14 13 Multiprotein bridging factor 1 (AHRD V3.3 *** S4T643_CAPAN) AT3G58680 Solyc09g055475.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc09g055510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc09g055520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055540.2 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2 Unknown protein Solyc09g055545.1 334 187 219 236 174 174 191 170 202 269 197 205 177 187 184 Unknown protein Solyc09g055560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cellulose synthase (AHRD V3.3 *-* A0A164XX41_DAUCA) Solyc09g055570.3 3000 1845 1746 2149 1360 1527 1697 1281 1877 2086 2069 1879 1736 1943 2400 GPCR kinase (AHRD V3.3 *** A0A2P5AIX2_TREOI) AT1G06840 Solyc09g055590.3 1012 679 472 748 634 451 548 565 512 989 515 538 608 756 467 Heat-inducible transcription repressor (AHRD V3.3 *** Q9LZN4_ARATH) AT2G30530 Solyc09g055650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 100 AT5G58850 Solyc09g055660.3 0 6 5 9 4 3 16 7 7 5 7 17 1 2 0 Bromodomain domain-containing protein (AHRD V3.3 *** A0A1Q3BAB8_CEPFO) Solyc09g055670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heat-inducible transcription repressor (AHRD V3.3 *-* A0A1P8BB54_ARATH) Solyc09g055700.4 2138 1822 1463 1131 1251 1381 1176 1405 1340 1662 1265 1432 2144 1792 1270 protein FLX-like 1 (AHRD V3.3 *** A0A2I4GXJ8_9ROSI) Solyc09g055710.3 78 80 135 119 87 120 126 64 60 71 127 61 117 107 178 Unknown protein Solyc09g055713.1 2 2 0 3 0 0 0 0 5 0 0 0 1 1 0 Unknown protein Solyc09g150125.1 3 2 0 10 0 0 0 0 2 1 0 3 1 0 5 Unknown protein Solyc09g055717.1 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 Bifunctional nitrilase/nitrile hydratase NIT4B (AHRD V3.3 *-* A0A2G2VPR2_CAPBA) Solyc09g055740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Insulinase (Peptidase family M16) family protein (AHRD V3.3 *-* A0A2U1QKB3_ARTAN) Solyc09g055750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Insulinase (Peptidase family M16) family protein (AHRD V3.3 --* AT1G06900.1) Solyc09g055755.1 898 928 631 820 718 698 737 829 842 668 771 749 963 1022 890 Myosin heavy chain-related protein (AHRD V3.3 *** A0A2U1LV14_ARTAN) AT5G59210 Solyc09g055790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1L2L8_ARTAN) Solyc09g055805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc09g055820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4E4L0_9ROSI) Solyc09g055830.1 0 2 0 0 0 1 2 0 0 0 0 0 0 0 0 Unknown protein Solyc09g055840.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A2U9A0K7_9GENT) Solyc09g055850.3 82 114 153 131 95 132 151 101 82 77 186 91 122 105 132 Proline-rich protein PRCC (AHRD V3.3 *-* A0A200PLX6_9MAGN) Solyc09g055860.1 19 19 5 24 30 14 16 17 21 27 9 23 10 8 20 Unknown protein Solyc09g055870.2 1211 1195 803 1190 1338 967 1112 1401 1026 1460 878 1281 1278 1015 579 Proline-rich protein PRCC (AHRD V3.3 *** A0A200PLX6_9MAGN) AT2G19270 Solyc09g055880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calmodulin-like protein 5 (AHRD V3.3 *** A0A2G3BM10_CAPCH) Solyc09g055890.4 42 39 70 45 73 45 39 27 50 49 49 33 47 71 74 Lipoxygenase (AHRD V3.3 *** A0A1S3YEP0_TOBAC) Solyc09g055900.4 130 139 373 335 133 165 200 80 128 171 501 96 151 185 408 Lipoxygenase (AHRD V3.3 *** K4CT85_SOLLC) Solyc09g055910.3 1271 1229 1102 1117 1371 1432 1269 1578 1304 1345 1306 1453 962 1083 1278 D-amino acid dehydrogenase (AHRD V3.3 *** A0A1J3CZD8_NOCCA) AT5G48440 Solyc09g055920.4 255 278 140 215 121 182 193 180 217 250 229 234 239 257 210 Poly(A)-specific ribonuclease PARN-like (AHRD V3.3 *** A0A2G3BM43_CAPCH) AT3G25430 Solyc09g055930.3 614 1123 669 1011 1320 1345 1391 1351 1065 1001 719 975 851 846 577 monocopper oxidase-like protein SKU5 (AHRD V3.3 *** A0A2I4E6T4_9ROSI) AT5G48450 Solyc09g055940.3 948 478 781 808 144 164 196 186 499 631 807 629 469 678 945 Bile acid:sodium symporter (AHRD V3.3 *** A0A200PU00_9MAGN) AT3G25410 Solyc09g055950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II D2 protein (AHRD V3.3 *-* E3T2U9_EQUAR) Solyc09g055953.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3GWQ9_NOCCA) Solyc09g055955.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3K694_NOCCA) Solyc09g055957.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MTR7_TRIPR) Solyc09g055990.2 0 3 0 0 0 0 0 0 1 6 5 2 4 1 3 ADP-ribosylation factor (AHRD V3.3 *-* A0A2I0VU55_9ASPA) Solyc09g055995.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PDV1_TRIPR) Solyc09g056040.4 3 9 36 10 13 25 27 13 10 23 3 10 5 8 13 E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *-* A0A1B1LUK2_VITPS) Solyc09g056060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g056070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *** O79414_SOLTU) ATMG00520 Solyc09g056080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* O79414_SOLTU) Solyc09g056090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g056100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4-dihydroxy-2-butanone 4-phosphate synthase (chloroplast) (AHRD V3.3 --* YP_009463666.1) Solyc09g056110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc09g056130.4 144 86 42 69 91 53 59 66 70 73 34 51 49 99 12 Ribosomal protein L15 (AHRD V3.3 *-* A0A2G3CLB1_CAPCH) Solyc09g056160.4 814 750 673 628 565 581 628 703 593 592 717 665 770 827 900 hypothetical protein (AHRD V3.3 *** AT5G48470.1) AT5G48470 Solyc09g056170.3 228 511 517 516 861 854 919 920 551 321 748 641 271 434 375 Fimbrin-2 (AHRD V3.3 *** A0A2G2WN11_CAPBA) AT5G48460 Solyc09g056175.1 0 0 0 0 0 0 0 1 0 0 0 0 7 0 0 Unknown protein Solyc09g056180.3 0 0 1 0 2 0 1 2 1 0 0 0 0 4 0 Glutathione S-transferase (AHRD V3.3 *-* A0A200PZB1_9MAGN) Solyc09g056190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g056200.3 78 137 128 112 89 121 113 109 82 70 87 102 124 166 124 Unknown protein Solyc09g056220.1 1 2 1 6 5 9 8 4 6 6 4 5 2 4 1 Unknown protein Solyc09g056222.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 AP-2 complex subunit alpha (AHRD V3.3 *-* A0A2G2VQ36_CAPBA) Solyc09g056224.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic (AHRD V3.3 *-* A0A2G2ZW71_CAPAN) Solyc09g056226.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc09g056228.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 purine permease 1-like (AHRD V3.3 *-* A0A1S4AAJ7_TOBAC) Solyc09g056230.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 O-methyltransferase, putative (AHRD V3.3 *** B9SGP0_RICCO) Solyc09g056233.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc09g056237.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g056260.4 469 296 411 384 399 409 422 358 348 375 499 345 285 352 481 tRNA pseudouridine synthase (AHRD V3.3 *** A0A2G3BLE9_CAPCH) AT2G30320 Solyc09g056270.3 66 69 69 83 67 53 42 52 32 67 15 83 55 61 11 casein kinase II subunit alpha (AHRD V3.3 --* XP_010317169.1) Solyc09g056280.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g056290.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) ATMG00490 Solyc09g056300.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g056310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* O79414_SOLTU) Solyc09g056320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 maturase-related protein (mitochondrion) (AHRD V3.3 --* YP_004842070.1) Solyc09g056330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g056340.3 149 292 249 370 348 355 427 380 300 259 473 276 287 258 235 Ras-related protein RABA5b (AHRD V3.3 *** A0A2G2V0T3_CAPBA) Solyc09g056350.4 743 917 736 853 926 846 893 1002 1023 826 739 791 752 882 701 Lipase class 3 family protein (AHRD V3.3 *** S8D401_9LAMI) AT3G07400 Solyc09g056360.3 273 319 779 508 306 264 221 265 357 516 614 313 469 350 752 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A1U8E5P6_CAPAN) AT3G25290 Solyc09g056380.1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 60S ribosomal protein L18a (AHRD V3.3 *** A0A2G2WKJ7_CAPBA) Solyc09g056390.1 0 0 0 0 0 2 0 0 3 0 0 0 0 0 0 Unknown protein Solyc09g056393.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3M2C0_TRIPR) ATMG00240 Solyc09g056397.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) Solyc09g056430.4 33 20 25 19 3 4 3 2 17 5 15 1 11 17 36 Serine/threonine-protein kinase OXI1 (AHRD V3.3 *** A0A2G2XS02_CAPBA) AT3G25250 Solyc09g150126.1 511 307 255 295 243 246 187 203 269 340 188 293 190 262 227 Unknown protein Solyc09g056440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g056450.4 1126 900 1740 928 870 913 882 969 857 1313 2486 1289 953 677 1811 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3BL85_CAPCH) Solyc09g056453.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc-finger homeodomain protein 4-like (AHRD V3.3 *** XP_010314609.1) Solyc09g056457.1 1 1 14 0 0 5 5 0 2 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc09g057500.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Unknown protein Solyc09g057505.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger CCCH domain-containing protein 53 isoform X4 (AHRD V3.3 *-* XP_010324869.1) Solyc09g057520.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc09g057530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc09g057540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc09g057550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HDG2 (AHRD V3.3 *-* A0A1J3DUE0_NOCCA) Solyc09g150127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g057580.4 574 274 192 280 236 299 320 278 272 520 213 329 186 204 322 DUF760 domain-containing protein (AHRD V3.3 *-* A0A1Q3CD93_CEPFO) Solyc09g057590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA (met) cytidine acetyltransferase%2C putative (DUF616) (AHRD V3.3 *-* AT1G53040.6) Solyc09g057600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF616 domain-containing protein (AHRD V3.3 *-* A0A1Q3BIE2_CEPFO) Solyc09g057603.1 69 6 0 21 0 2 0 1 2 9 11 7 17 14 24 Cytochrome P450 (AHRD V3.3 *-* A0A200Q4B5_9MAGN) Solyc09g057607.1 252 67 58 114 15 29 28 23 108 163 184 95 42 66 139 Unknown protein Solyc09g057630.3 130 903 917 1022 2041 1790 1619 2305 926 962 1293 1007 702 727 353 Glucan endo-1,3-beta-glucosidase 3-like protein (AHRD V3.3 *** A0A2K3MT62_TRIPR) AT3G07320 Solyc09g057640.4 575 893 772 967 1078 891 994 1077 883 1002 758 898 809 830 681 Cellulose synthase-like C4, glycosyltransferase family 2 (AHRD V3.3 *** A9TYJ5_PHYPA) AT3G07330 Solyc09g057650.3 2426 4308 3623 3238 4620 4818 4721 5062 2928 2506 3160 3379 5097 4240 3781 40S ribosomal protein S8 (AHRD V3.3 *** A0A1J7GEB5_LUPAN) AT5G59240 Solyc09g057660.3 1374 1559 1477 1213 1727 1802 1681 1861 1610 1083 874 1563 1855 1740 1499 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G2WN61_CAPBA) AT3G25230 Solyc09g057670.3 987 1740 1979 1692 1850 2289 2306 1854 1322 1242 1722 1585 1755 1995 1867 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G2VYT9_CAPBA) AT3G25220 Solyc09g057680.3 28 29 19 10 2 3 22 9 13 16 0 4 11 11 3 receptor-like kinase TMK4 (AHRD V3.3 *** A0A2G2YRX1_CAPAN) Solyc09g057710.4 299 363 560 500 604 479 565 480 431 454 581 369 447 358 519 bHLH transcription factor 057 Solyc09g057740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g057760.4 261 63 38 62 13 24 25 35 36 84 72 29 40 40 44 PDDEXK-like protein (AHRD V3.3 *-* A0A2U1LF29_ARTAN) Solyc09g057800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g057810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* A0A0C5BA00_9SOLA) Solyc09g057820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* E7E1W1_SYRVU) Solyc09g057830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* O79414_SOLTU) Solyc09g057840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein (AHRD V3.3 *-* A0A1D8I1Y1_ORYRU) Solyc09g057860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g057870.4 188 143 208 156 214 176 190 155 233 184 251 197 194 177 193 protein FAR1-RELATED SEQUENCE 7 (AHRD V3.3 *** A0A2I4EFQ2_9ROSI) Solyc09g057880.3 165 172 203 126 156 171 165 133 190 149 212 160 132 175 147 protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2I4HVM5_9ROSI) AT2G43280 Solyc09g057883.1 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) AT2G03760 Solyc09g150128.1 11 5 7 12 21 6 2 10 1 2 4 7 5 6 0 Unknown protein Solyc09g057900.3 28 24 6 27 31 26 32 19 25 14 40 19 12 23 2 myosin-J heavy chain-like isoform X1 (AHRD V3.3 --* XP_024926360.1) Solyc09g150129.1 6 10 1 3 0 6 1 0 5 1 6 3 1 4 0 Unknown protein Solyc09g150130.1 4 1 0 3 0 2 2 2 1 3 0 1 0 0 1 Inositol polyphosphate 5-phosphatase I (AHRD V3.3 *-* F4HT46_ARATH) Solyc09g057910.3 143 166 83 112 126 124 119 218 188 155 116 142 95 160 88 N-alpha-acetyltransferase 25, NatB auxiliary subunit (AHRD V3.3 *** A0A1J3JDT3_NOCCA) Solyc09g057920.3 261 280 207 223 284 293 282 301 257 227 329 273 331 288 325 N-alpha-acetyltransferase 25, NatB auxiliary subunit (AHRD V3.3 *** A0A1J3JDT3_NOCCA) Solyc09g057930.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1L2L8_ARTAN) Solyc09g057940.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L15 (AHRD V3.3 *-* A0A2G2ZPD1_CAPAN) Solyc09g150131.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HOX32 (AHRD V3.3 *-* A0A2G3A6N3_CAPAN) Solyc09g057950.3 44 61 183 120 126 140 111 55 113 114 192 81 48 82 245 Asparagine--tRNA ligase, cytoplasmic 2 (AHRD V3.3 *** A0A1U8ED08_CAPAN) AT3G07420 Solyc09g057960.1 42 8 34 23 13 9 9 10 13 42 34 25 56 9 22 Cysteine-rich receptor-like protein kinase (AHRD V3.3 *-* A0A2K3KZ48_TRIPR) AT5G48540 Solyc09g058960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g058970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g058980.3 30 32 48 50 61 69 81 69 28 60 52 48 59 26 41 Unknown protein Solyc09g058990.3 575 610 815 684 734 715 701 660 544 454 732 600 746 666 700 hypothetical protein (AHRD V3.3 *** AT3G07440.2) AT3G07440 Solyc09g058993.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Homeobox-leucine zipper protein HDG11 (AHRD V3.3 *-* G2J5S9_MAIZE) Solyc09g058997.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc09g059020.4 51 57 54 51 49 33 34 37 20 65 37 26 16 25 73 Quinone-oxidoreductase QR1, chloroplastic (AHRD V3.3 *** QR1_TRIVS) Solyc09g059030.4 1096 894 1099 971 931 1067 1042 937 1046 984 1338 931 976 1045 1566 Quinone-oxidoreductase chloroplastic-like (AHRD V3.3 *** A0A2K3P901_TRIPR) AT4G13010 Solyc09g059040.3 1576 1048 996 875 479 453 398 467 1032 1249 1342 954 1641 1495 1368 Oxidoreductase, zinc-binding dehydrogenase family protein (AHRD V3.3 *** A0A2U1PT68_ARTAN) AT4G13010 Solyc09g059060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Quinone-oxidoreductase QR1, chloroplastic (AHRD V3.3 *-* QR1_TRIVS),Pfam:PF13602 Solyc09g059070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Quinone-oxidoreductase chloroplastic-like (AHRD V3.3 *-* A0A2K3P901_TRIPR) Solyc09g059080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g059090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 --* A0A1R3HFM1_COCAP) Solyc09g059100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HDG12 (AHRD V3.3 *-* A0A2G2X830_CAPBA) Solyc09g059105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc09g059120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase SDIR1-like (AHRD V3.3 *** XP_025886233.1) Solyc09g059125.1 37 17 30 6 12 17 26 17 11 34 24 11 13 10 19 protein ENHANCED DISEASE RESISTANCE 2-like isoform X1 (AHRD V3.3 --* XP_022740908.1) Solyc09g059130.1 0 0 0 0 1 0 0 0 2 1 0 0 0 1 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT4G12140 Solyc09g059140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein RGA2 (AHRD V3.3 *-* RGA2_SOLBU) Solyc09g059150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Low affinity sulfate transporter 3 (AHRD V3.3 *-* A0A2G2YEA6_CAPAN) Solyc09g059153.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc09g059155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g059157.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc09g059170.3 35 333 228 254 305 222 325 232 1139 286 408 751 449 346 351 Glycosyltransferase (AHRD V3.3 *** A4GRT2_9SOLA) Solyc09g059200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g059210.1 4 11 12 16 0 1 6 2 14 4 23 2 9 9 5 Class I heat shock protein (AHRD V3.3 *-* A0A2K3JRP0_TRIPR) Solyc09g059220.1 90 79 101 58 95 131 154 98 76 69 90 76 66 65 43 neuronal acetylcholine receptor subunit alpha-5 (AHRD V3.3 *** AT2G31490.1) Solyc09g059240.3 78 165 3 82 72 104 74 106 20 21 0 40 21 29 22 Cytochrome P450 (AHRD V3.3 *** A0A2U1Q1Z2_ARTAN) Solyc09g059245.1 2 9 0 0 4 2 0 0 1 4 1 0 7 0 0 Unknown protein Solyc09g059250.1 83 47 109 76 69 82 77 23 45 51 85 57 59 43 188 Unknown protein Solyc09g059260.4 55 34 50 44 21 25 59 54 45 46 38 32 24 51 57 Unknown protein Solyc09g059270.3 1638 976 960 1014 826 728 755 734 940 1584 979 1327 1403 1186 1538 ER lumen protein retaining receptor (AHRD V3.3 *** A0A200QBW0_9MAGN) AT3G25160 Solyc09g059280.3 31 33 36 22 47 33 41 35 38 32 63 30 27 26 52 Histone H3 (AHRD V3.3 *-* A0A1U8FF14_CAPAN) Solyc09g059290.4 227 249 246 342 288 397 360 217 179 185 278 204 175 212 271 Unknown protein Solyc09g059300.1 25 33 24 34 13 21 18 26 16 14 19 15 13 28 15 Unknown protein Solyc09g059310.3 1661 2862 2300 2061 2516 2480 2390 2596 1933 1562 1622 2065 2982 2667 1720 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *** F4J8X6_ARATH) AT3G25150 Solyc09g059320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Hexosyltransferase (AHRD V3.3 *-* A0A2I4H1Z6_9ROSI) Solyc09g059330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Hexosyltransferase (AHRD V3.3 *-* A0A2I4DJQ0_9ROSI) Solyc09g059335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc09g059340.2 28 11 16 7 13 2 16 10 13 11 30 14 10 11 32 Unknown protein Solyc09g150132.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc09g059380.1 32 16 56 32 9 64 31 19 49 17 104 31 22 20 60 Unknown protein Solyc09g059390.2 14 14 14 28 28 15 20 13 20 10 20 23 12 23 19 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G3A8F6_CAPAN) Solyc09g059400.4 152 45 140 168 12 30 19 19 87 90 114 66 22 145 130 Unknown protein Solyc09g059410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g059420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g059423.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VXM7_9ASPA) ATMG00810 Solyc09g059427.1 59 26 32 44 4 18 8 0 16 24 35 28 36 21 99 Unknown protein Solyc09g059430.3 969 453 392 258 71 62 68 71 199 555 444 160 440 378 266 RPM1-interacting protein 4 (AHRD V3.3 *** A0A1P8SF00_NICBE) AT3G25070 Solyc09g059440.1 38 338 310 278 434 402 453 460 289 210 233 373 94 334 93 cell division control protein 45 homolog (AHRD V3.3 *** A0A2I4H5Z7_9ROSI) AT3G25100 Solyc09g059450.4 1679 1612 1642 1562 1258 1226 1265 1356 1514 1653 1401 1484 1663 1584 1635 RING/U-box superfamily protein (AHRD V3.3 --* AT5G48655.6) Solyc09g059460.4 59 68 87 95 101 160 123 111 107 85 102 126 68 54 69 membrane protein of ER body-like protein (AHRD V3.3 *-* A0A2I4FK95_9ROSI) Solyc09g059470.4 250 407 553 373 523 537 506 425 441 336 529 387 303 367 325 hypothetical protein (AHRD V3.3 *** AT3G07210.1) AT3G07210 Solyc09g150133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L19-2 (AHRD V3.3 *-* A0A2G3C1J0_CAPCH) Solyc09g059475.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g150134.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g059500.3 1617 1197 1057 1017 921 1001 962 1085 996 1331 1063 944 1450 1139 1190 FHA domain-containing protein (AHRD V3.3 *** A0A1Q3BS28_CEPFO) AT3G07220 Solyc09g059510.3 847 664 580 694 524 745 649 568 601 998 705 683 857 784 668 Ethylene-responsive transcription factor-like protein (AHRD V3.3 *** A0A1U8EE68_CAPAN) AT4G13040 Solyc09g059515.1 110 125 241 172 254 229 264 188 156 122 302 148 122 118 143 Unknown protein Solyc09g059520.3 309 356 521 397 388 325 339 296 362 384 392 309 387 354 476 Heat stress transcription factor A-8 (AHRD V3.3 *** A0A2G3BLA4_CAPCH) AT1G67970 Solyc09g063157.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4EGG2_9ROSI) Solyc09g059550.1 61 198 280 320 330 196 198 295 279 148 191 330 272 244 228 acidic leucine-rich nuclear phosphoprotein 32 family B protein (AHRD V3.3 *-* AT3G25130.1) AT3G25130 Solyc09g059560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 DNA-binding domain protein (AHRD V3.3 -** AT3G28853.1) Solyc09g059565.1 0 0 0 0 0 3 1 2 0 0 0 0 0 0 0 Unknown protein Solyc09g059570.3 169 314 412 307 414 441 360 284 282 139 433 222 383 431 254 B-cell receptor-associated protein 31-like protein (AHRD V3.3 *** A0A2U1Q510_ARTAN) AT5G48660 Solyc09g059575.1 16 21 13 7 17 25 3 15 14 10 9 14 43 19 5 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PTX1_9MAGN) AT3G25060 Solyc09g059600.4 560 635 615 601 583 618 741 812 624 596 502 587 617 692 584 GPI transamidase component PIG-S (AHRD V3.3 *** A0A1J3IF58_NOCCA) AT3G07180 Solyc09g059610.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycine-rich protein (AHRD V3.3 *** A0A2G2ZTB0_CAPAN) Solyc09g059620.4 975 968 968 723 890 904 855 1032 879 617 812 829 976 946 914 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 *** A0A2U1M8A2_ARTAN) AT3G07170 Solyc09g059630.3 102 166 202 154 197 150 165 138 122 82 212 131 86 129 114 UBX domain-containing protein 4 (AHRD V3.3 *** A0A2U1KP86_ARTAN) Solyc09g059640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A1U8QCD9_CAPAN) Solyc09g059650.4 229 62 115 68 66 44 50 57 46 91 95 50 46 53 69 Unknown protein Solyc09g059660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit c, chloroplastic (AHRD V3.3 *-* Q008G4_9POAL) ATCG00140 Solyc09g059670.4 233 118 145 187 98 136 175 97 122 132 158 165 114 164 288 Alpha/beta hydrolase family protein (AHRD V3.3 *** Q8RX69_ARATH) Solyc09g059673.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g150135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) Solyc09g059677.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* POLX_TOBAC) Solyc09g059710.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Ribose 5-phosphate isomerase (AHRD V3.3 *-* A0A200Q4T3_9MAGN) Solyc09g059720.1 4 0 0 1 0 0 0 0 3 0 0 0 0 0 0 Ribose 5-phosphate isomerase A (AHRD V3.3 *-* A0A1Y1IHK3_KLENI) Solyc09g059740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein OBERON 1 (AHRD V3.3 *** A0A1J3D441_NOCCA) Solyc09g059742.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc09g059744.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc09g059746.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc09g059748.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) Solyc09g059770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *-* A0A1B1LUK2_VITPS) Solyc09g059780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g059800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g150136.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VHL0_9ASPA) Solyc09g059820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *-* A0A1B1LUK2_VITPS) Solyc09g059830.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein RGA2 (AHRD V3.3 *-* A0A1U8GK21_CAPAN) Solyc09g059835.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-LRR resistance-like protein (AHRD V3.3 *-* A0A2U1LV06_ARTAN) Solyc09g059840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein RGA2 (AHRD V3.3 *-* A0A1U8GK21_CAPAN) Solyc09g059850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Amino acid transporter (AHRD V3.3 *-* A0A200QY84_9MAGN) Solyc09g059860.1 1 0 9 1 4 13 1 0 6 0 0 9 1 8 0 spindle assembly abnormal protein (AHRD V3.3 --* AT4G14840.3) Solyc09g059870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein OBERON 1 (AHRD V3.3 *-* A0A1J3D441_NOCCA) Solyc09g059890.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.2) Solyc09g059900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.1) Solyc09g059910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *** AT1G05410.1) Solyc09g059915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc09g059950.3 109 72 69 81 103 66 68 48 74 45 80 98 79 61 94 amino acid-ligase (AHRD V3.3 *** AT3G07150.1) AT3G07150 Solyc09g059960.3 779 1216 1264 1207 1454 1576 1337 1466 1446 1446 1179 1448 1432 1509 1016 GPI transamidase component Gpi16 subunit family protein (AHRD V3.3 *** Q949U5_ARATH) AT3G07140 Solyc09g059970.3 553 1053 1352 1134 1609 1560 1539 1603 1055 878 1184 1295 1421 1182 910 Small ubiquitin-related modifier (AHRD V3.3 *** A0A218VRF2_PUNGR) Solyc09g059980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A078GMF9_BRANA) Solyc09g059990.1 158 304 411 536 751 621 475 633 416 280 391 446 288 292 241 RING/U-box superfamily protein (AHRD V3.3 *** A0A1I9LSG2_ARATH) AT3G25030 Solyc09g059993.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc09g059997.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ASHH1 (AHRD V3.3 *** A0A1U8H996_CAPAN) Solyc09g060010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.2) Solyc09g060020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.1) Solyc09g060030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g060060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.1) Solyc09g060070.2 5 6 3 5 16 9 9 6 1 4 3 9 0 3 0 Unknown protein Solyc09g060080.4 3708 3271 3055 4690 3230 3321 4088 3652 3063 3656 3334 2845 2593 3420 2688 Helicase/SANT-associated DNA-binding protein (AHRD V3.3 *** A0A2K3NM86_TRIPR) AT3G24870 Solyc09g060090.3 175 231 415 313 261 314 323 268 345 244 391 240 253 242 459 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A178VMA9_ARATH) AT3G24840 Solyc09g060100.3 66 68 33 56 53 84 41 55 81 49 64 59 20 68 49 transmembrane protein (AHRD V3.3 *** AT4G13150.1) AT4G13150 Solyc09g060110.4 106 545 284 489 473 405 433 466 497 299 478 394 333 333 630 Protein kinase domain (AHRD V3.3 *** A0A200PPE5_9MAGN) AT5G48740 Solyc09g060115.1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 Unknown protein Solyc09g060130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc09g060140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc09g060150.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc09g060160.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HDG11 (AHRD V3.3 *-* G2J5S9_MAIZE) Solyc09g060170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc09g060175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein ROC2 (AHRD V3.3 *-* A0A2I0VYA7_9ASPA) Solyc09g060180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g060210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g060215.1 341 343 493 486 632 661 645 536 306 337 434 535 213 326 311 Unknown protein Solyc09g061230.3 169 498 432 447 604 453 547 390 494 561 536 609 520 418 403 Cytochrome b5 (AHRD V3.3 *** A0A2G3CCB6_CAPCH) AT2G32720 Solyc09g061240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase MLL (AHRD V3.3 *-* A0A1D1ZJ99_9ARAE) Solyc09g061250.4 72 118 87 117 127 92 114 186 143 118 58 62 70 32 99 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2Z754_CAPAN) AT5G48800 Solyc09g061260.2 8 16 2 31 25 52 46 18 9 18 7 0 8 18 9 Protein OBERON 1 (AHRD V3.3 *-* A0A1J3K8V5_NOCCA) Solyc09g061270.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061280.4 1488 3648 2753 4703 7236 5858 7450 6569 2417 3517 2636 4432 1918 2343 879 p27KIP1-related-protein 2 Solyc09g061290.3 1208 1211 1342 1430 1307 1208 1458 1237 1938 1517 1340 1526 1513 1433 1385 Transcriptional corepressor LEUNIG (AHRD V3.3 *** A0A2G3BLE3_CAPCH) AT2G32700 Solyc09g061310.3 820 714 781 574 802 783 788 787 729 605 659 575 1080 776 654 PPPDE putative thiol peptidase family protein (AHRD V3.3 *** A0A2U1N5E2_ARTAN) AT3G07090 Solyc09g061320.4 434 379 852 447 237 379 374 262 391 578 765 354 567 406 369 thiamine-repressible mitochondrial transport protein THI74 (AHRD V3.3 *** A0A2I4GA08_9ROSI) AT3G07080 Solyc09g061330.3 2 0 4 1 1 13 7 3 8 2 4 0 1 13 2 Serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3BL62_CAPCH) AT3G07070 Solyc09g061340.1 457 387 302 467 409 333 283 422 300 354 249 392 346 528 288 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R8S6_9MAGN) Solyc09g061345.1 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heat shock protein (AHRD V3.3 *** Q8VY73_ARATH) Solyc09g061360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 spindle assembly abnormal protein (AHRD V3.3 *-* AT4G14840.3) Solyc09g061370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein OBERON 1 (AHRD V3.3 *-* A0A1J3K8V5_NOCCA) Solyc09g061380.3 812 605 565 582 501 520 504 493 438 460 404 438 629 629 644 NHL repeat-containing protein 2 (AHRD V3.3 *** A0A1J3JBQ1_NOCCA) AT3G07060 Solyc09g061390.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Maturase K (AHRD V3.3 *-* Q95DQ0_9SOLA) Solyc09g150137.1 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 Unknown protein Solyc09g061410.1 196 163 186 374 131 170 134 132 144 197 177 140 337 224 428 CLAVATA3/ESR (CLE)-related protein 41-like (AHRD V3.3 --* XP_022856139.1) Solyc09g061420.3 262 392 368 370 384 473 480 428 364 307 410 338 298 344 410 phosphoglycolate phosphatase (AHRD V3.3 *** AT5G48830.1) AT5G48830 Solyc09g061430.3 1213 2077 1682 1337 1329 1376 1463 1414 1354 791 1001 1103 2816 2265 1697 nuclear GTPase DQ304482 AT3G07050 Solyc09g061440.4 1150 1214 1628 1359 1394 1094 1066 1274 1522 1766 1478 1587 1364 1198 1359 hypothetical protein (AHRD V3.3 *-* AT4G13200.1) Solyc09g061460.3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* R4PIB2_UTRGI) Solyc09g061465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2K1Y5H6_POPTR) Solyc09g061470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 spindle assembly abnormal protein (AHRD V3.3 *-* AT4G14840.3) Solyc09g061500.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.1) Solyc09g061510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heat shock protein (AHRD V3.3 *-* Q8VY73_ARATH) Solyc09g061515.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc09g061520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 U-box domain-containing protein 4 (AHRD V3.3 *-* A0A2G2XGT0_CAPBA) Solyc09g061540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.1) Solyc09g061545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3DEI6_NOCCA) ATMG00240 Solyc09g061550.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lectin receptor kinase (AHRD V3.3 *-* A0A2K3NFA7_TRIPR) Solyc09g061555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lectin receptor kinase (AHRD V3.3 *-* A0A2K3NFA7_TRIPR) Solyc09g061580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.1) Solyc09g061590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.1) Solyc09g061600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK adapter%2C putative (DUF1423) (AHRD V3.3 *-* AT1G05410.2) Solyc09g061610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S14, mitochondrial (AHRD V3.3 --* RT14_OENBE) Solyc09g061615.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061620.3 441 733 683 534 617 607 551 592 677 513 601 631 726 596 546 Vesicle-associated membrane protein (AHRD V3.3 *** A0A1U8H291_CAPAN) AT1G04760 Solyc09g061625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A1J3JSN7_NOCCA) Solyc09g061630.2 0 6 7 7 3 6 2 13 0 9 0 0 6 0 1 Unknown protein Solyc09g061633.1 23 57 37 141 57 36 38 21 99 39 60 90 39 84 65 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc09g061637.1 10 35 18 48 14 9 16 16 32 19 28 26 1 23 23 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc09g061680.3 452 376 385 297 282 234 290 291 362 374 283 276 365 343 331 Pantothenate synthetase (AHRD V3.3 *** A0A0L8EZL5_9CLOT) AT5G48840 Solyc09g150138.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 --* XP_021635953.1) Solyc09g061700.3 28 34 73 86 0 7 2 7 45 23 104 12 20 27 62 Protein SULFUR DEFICIENCY-INDUCED 1 (AHRD V3.3 *** A0A1U8GXQ8_CAPAN) AT5G48850 Solyc09g061710.3 498 632 683 391 359 402 333 352 487 339 411 370 888 879 609 Alba DNA/RNA-binding protein (AHRD V3.3 *-* A0A1I9LSC0_ARATH) AT3G07030 Solyc09g061715.1 20 5 3 10 0 1 3 3 12 10 5 10 6 6 32 hypothetical protein (AHRD V3.3 *-* AT3G24750.1) AT3G24750 Solyc09g061750.3 529 376 459 459 392 509 503 337 429 361 685 353 354 372 733 DUF1644 domain-containing protein (AHRD V3.3 *** A0A1Q3BSB1_CEPFO) AT3G24740 Solyc09g061760.1 40 45 56 47 14 30 28 41 25 44 12 14 47 45 39 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3DBN2_CAPCH) AT2G17525 Solyc09g061780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF1644 domain-containing protein (AHRD V3.3 *-* A0A1Q3BSB1_CEPFO) Solyc09g061790.1 18 23 21 15 32 36 9 23 16 9 7 8 20 14 2 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200PYQ3_9MAGN) Solyc09g061791.1 1 2 4 6 0 0 0 0 1 0 0 0 0 4 9 Cytochrome P450 (AHRD V3.3 *** A0A2U1L5B3_ARTAN) Solyc09g061792.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A2G3A5M7_CAPAN) Solyc09g150139.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zf-CCHC domain-containing protein (AHRD V3.3 *-* A0A1Q3DCH4_CEPFO) Solyc09g061794.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061796.1 6 17 4 6 11 8 16 12 4 10 3 2 2 1 0 MP domain-containing protein (AHRD V3.3 *** A0A1Q3CUG1_CEPFO) Solyc09g061798.1 3 0 0 0 0 1 3 0 1 2 0 2 2 0 0 Unknown protein Solyc09g061830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061840.4 951 1052 1604 821 433 381 401 535 928 1904 797 779 2033 1407 864 3-ketoacyl-CoA thiolase peroxisomal-like (AHRD V3.3 *** A0A2K3P5R8_TRIPR) Solyc09g061850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *** A0A2I0XAY7_9ASPA) Solyc09g061860.4 396 984 560 818 788 888 828 810 1715 1856 2000 1949 791 1079 1205 Sterol 3-beta-glucosyltransferase (AHRD V3.3 *** B6U4Q7_MAIZE) Solyc09g061870.3 1 15 9 7 36 19 22 14 5 6 22 9 4 3 1 Zinc finger protein 7 (AHRD V3.3 *** A0A2G2VLG0_CAPBA) Solyc09g061880.2 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061890.3 97 306 840 973 421 395 339 328 447 711 1306 376 404 331 909 Pectate lyase (AHRD V3.3 *** A0A2G2VZE8_CAPBA) AT5G48900 Solyc09g061900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon RE1 (AHRD V3.3 --* POLR1_ARATH) Solyc09g061910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g061930.4 364 822 768 743 1128 1035 845 1149 1265 640 709 1087 781 809 546 Ovary receptor kinase 7 (AHRD V3.3 *** S4WHD2_SOLCH) AT3G24660 Solyc09g061940.3 0 0 2 0 10 9 14 15 2 2 1 12 1 1 0 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6P703_ACTCH) AT5G48940 Solyc09g061950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *** A0A2K3M5S8_TRIPR) Solyc09g061960.3 0 25 12 1 20 24 12 24 16 9 16 14 3 14 6 Late embryogenesis abundant protein (AHRD V3.3 --* A0A200PQ87_9MAGN) AT4G13230 Solyc09g062960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g062970.1 107 995 1375 1021 1113 1720 923 1209 819 879 714 1478 759 1181 317 Unknown protein Solyc09g062980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g062990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g063010.4 2472 1727 333 962 1397 1261 1050 1279 1084 1261 426 692 1290 554 573 bHLH transcription factor 058 AT2G20180 Solyc09g063020.4 277 260 328 338 311 334 332 272 262 338 338 315 309 262 305 Unknown protein Solyc09g063030.4 2306 1989 1697 1864 1741 1924 1929 2111 2244 2235 1722 1887 1558 1843 1524 CLIP-associated protein (AHRD V3.3 *** A0A2G2WGM7_CAPBA) AT2G20190 Solyc09g063040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-coding resistance gene analog (AHRD V3.3 *-* B3V7R3_9SOLA) Solyc09g063050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3AXR7_CAPCH) Solyc09g063060.3 0 4 3 14 0 0 5 2 8 3 12 5 3 0 1 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2WN72_CAPBA) Solyc09g063070.3 2250 927 945 771 714 738 664 808 850 1158 861 957 990 833 1122 Tetraspanin/Peripherin (AHRD V3.3 *** A0A200PVL6_9MAGN) AT4G28770 Solyc09g063090.4 1708 1990 1804 1775 1544 1806 1655 1793 2313 2420 1896 1868 2320 1733 1770 methyl-coenzyme M reductase II subunit gamma%2C putative (DUF3741) (AHRD V3.3 *-* AT5G43880.4) AT4G28760 Solyc09g063130.3 7694 7725 8215 8854 13473 12599 11205 11958 8888 14639 10412 10415 5337 5609 9331 Photosystem I reaction center subunit IV (AHRD V3.3 *-* A0A2P6U4S6_CHLSO) AT2G20260 Solyc09g063140.4 296 509 451 446 512 664 617 708 536 470 333 506 463 442 302 protein LOW PSII ACCUMULATION 1, chloroplastic (AHRD V3.3 *** A0A2I4GK27_9ROSI) AT4G28740 Solyc09g063150.3 7 9 0 6 0 0 0 0 0 0 0 0 2 10 39 Glutathione S-transferase (AHRD V3.3 *** A0A200PVK3_9MAGN) Solyc09g064160.3 0 60 8 8 14 61 39 37 24 2 41 11 4 10 0 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G3BKF8_CAPCH) AT5G43890 Solyc09g064165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc09g064200.4 1123 1395 1545 1314 1595 1707 1962 1823 1705 1138 1349 1110 1136 1515 1230 Myosin (AHRD V3.3 *** W5ZTD6_MAIZE) AT5G43900 Solyc09g064230.3 1249 1010 1631 933 1338 1719 1152 1436 993 1508 1219 1921 632 1090 667 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** O64492_ARATH) AT1G04150 Solyc09g064240.3 912 685 890 884 1014 1085 1074 915 762 873 852 825 526 742 878 PfkB-like carbohydrate kinase family protein (AHRD V3.3 *** A0A2U1QKJ7_ARTAN) AT4G28706 Solyc09g064243.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PNF5_TRIPR) ATMG00240 Solyc09g064245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) Solyc09g064247.1 437 122 246 233 157 181 160 180 172 206 229 214 96 136 336 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3AW65_CEPFO) Solyc09g064260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g064270.3 726 1245 1106 1244 1594 1626 1593 1782 1447 1035 1106 1551 1179 1256 1055 Receptor-like serine/threonine-protein kinase ALE2 (AHRD V3.3 *** A0A1U8E4M9_CAPAN) AT2G20300 Solyc09g064273.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CLP4_CEPFO) Solyc09g150140.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 Heat shock cognate 70 kDa protein (AHRD V3.3 *-* A0A2G3CBI3_CAPCH) Solyc09g064300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3AGY9_CAPAN) Solyc09g064310.3 62 38 36 36 31 42 62 72 46 37 41 43 41 34 39 WD repeat-containing protein 26 (AHRD V3.3 *** A0A1J3IS25_NOCCA) Solyc09g064320.3 216 178 270 255 206 242 255 150 163 170 223 170 171 186 319 WD repeat-containing protein 26 (AHRD V3.3 *** A0A1J3HFZ9_NOCCA) Solyc09g064330.2 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 RmlC-like cupins superfamily protein (AHRD V3.3 *** A0A2U1M1K3_ARTAN) AT4G28703 Solyc09g064340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RmlC-like cupins superfamily protein (AHRD V3.3 *** A0A2U1M1K3_ARTAN) AT4G28703 Solyc09g064350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RmlC-like cupins superfamily protein (AHRD V3.3 *** A0A2U1M1K3_ARTAN) AT4G28703 Solyc09g064360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A2G2Z0E9_CAPAN) Solyc09g150141.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4EGG2_9ROSI) Solyc09g064370.4 4134 4269 3448 3983 4130 4173 4059 4532 4517 4437 4148 4455 4651 4434 4460 S-(hydroxymethyl)glutathione dehydrogenase (AHRD V3.3 *** E9ND18_SOLHA) AT5G43940 Solyc09g064380.3 983 551 475 477 495 470 504 372 300 368 286 411 525 434 342 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** F4I456_ARATH) AT1G04130 Solyc09g064400.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I reaction center subunit IX (AHRD V3.3 *** A0A2H4RF93_9LAMI) ATCG00630 Solyc09g064410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L33, chloroplastic (AHRD V3.3 *** I6N977_DATST) ATCG00640 Solyc09g064420.4 1257 914 855 1016 762 892 838 830 762 1094 646 995 950 918 738 hypothetical protein (AHRD V3.3 *-* AT4G28690.2) Solyc09g064430.4 1514 853 796 780 623 715 764 668 641 850 916 796 638 849 1015 Tyrosine decarboxylase 1 (AHRD V3.3 *** A0A2G2YS53_CAPAN) AT2G20340 Solyc09g064440.4 1292 1288 1610 1572 1362 1439 1418 1414 1671 1720 1894 1416 1561 1597 1874 ABC transporter C family member 13 (AHRD V3.3 *** A0A2G2VCG3_CAPBA) AT1G04120 Solyc09g064450.3 2974 3577 3748 3923 4579 4379 4050 4475 3356 3819 3557 3954 4189 3611 3439 NADH dehydrogenase (AHRD V3.3 *** A0A2K3NNI2_TRIPR) AT2G20360 Solyc09g064460.1 6 1 0 0 4 2 0 0 3 0 9 2 0 7 2 xyloglucan galactosyltransferase MUR3-like (AHRD V3.3 *-* XP_020550476.1) AT2G20362 Solyc09g064470.3 568 664 423 587 526 434 416 618 805 782 524 610 542 409 627 Xyloglucan galactosyltransferase KATAMARI1 (AHRD V3.3 *** A0A1U8E641_CAPAN) Solyc09g064480.1 681 675 1144 863 697 744 661 518 840 666 1044 561 768 695 1293 Xyloglucan galactosyltransferase KATAMARI1 (AHRD V3.3 *-* A0A1U8E641_CAPAN) Solyc09g064490.3 0 32 8 12 9 11 9 16 38 8 18 5 8 7 0 Subtilisin-like protease SDD1-like protein (AHRD V3.3 *** A0A2K3NJP3_TRIPR) AT1G04110 Solyc09g064500.3 141 423 339 277 521 466 525 558 427 266 337 374 299 332 391 Photosystem II reaction center Psb28 protein (AHRD V3.3 *** A0A1U8EF03_CAPAN) AT4G28660 Solyc09g064510.3 576 386 364 344 228 288 290 264 284 425 332 278 391 322 294 Heme oxygenase-like, multi-helical, HAD-like domain protein (AHRD V3.3 *** A0A2U1LQN1_ARTAN) Solyc09g064520.3 63 129 211 155 207 217 256 226 284 124 201 187 139 154 301 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A061DND1_THECC) AT4G28650 Solyc09g064530.3 211 158 315 198 151 245 150 147 191 157 184 193 138 171 101 auxin-regulated IAA12 Solyc09g064540.3 250 216 331 266 161 218 198 177 231 231 278 162 252 255 247 Vacuolar protein sorting-associated protein 62 (AHRD V3.3 *** A0A200PVW2_9MAGN) AT1G04090 Solyc09g064550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g150142.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *-* A0A2U1N0B2_ARTAN) Solyc09g064560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 proline-rich extensin-like protein EPR1 (AHRD V3.3 *-* XP_019069856.1) Solyc09g064570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 proline-rich extensin-like protein EPR1 (AHRD V3.3 *-* XP_019069856.1) Solyc09g064580.2 1 0 2 0 1 1 2 0 1 0 0 2 0 0 1 Photosystem II reaction center protein M (AHRD V3.3 *-* E9KJ84_9ORYZ) ATCG00220 Solyc09g064590.4 7982 6099 5714 5140 4387 4962 5691 4572 4335 4984 5097 4761 5358 6003 5945 Unknown protein Solyc09g064600.3 131 114 181 144 82 143 175 68 76 71 131 104 85 83 144 NBS-LRR disease resistance protein-like (AHRD V3.3 *-* Q5JLD4_ORYSJ) Solyc09g064610.3 254 247 282 256 247 357 256 255 311 291 229 227 207 312 276 Disease resistance protein RGA2 (AHRD V3.3 *** A0A1U8GK21_CAPAN) Solyc09g064620.3 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 Unknown protein Solyc09g064630.3 1323 1638 1344 1979 1767 1473 1540 1720 1846 1799 924 1501 1754 1343 1393 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* F4K464_ARATH) Solyc09g064640.1 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 46 (AHRD V3.3 *-* A0A2G3AUZ3_CAPCH) Solyc09g064645.1 14 11 1 18 0 0 2 0 0 1 6 0 0 3 16 Ribonuclease H-like domain-containing protein (AHRD V3.3 *-* A0A2U1M464_ARTAN) Solyc09g064660.4 4268 2395 3158 2439 2345 2668 2405 1998 1784 1724 2818 2081 2493 2422 2718 Small nuclear ribonucleoprotein Sm D1 (AHRD V3.3 *** A0A2U1M5R8_ARTAN) AT3G07590 Solyc09g064670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *** A0A1U8ETX1_CAPAN) Solyc09g064680.3 6 2 0 3 0 4 2 3 3 1 0 6 0 5 0 NB-LRR tospovirus immune receptor (AHRD V3.3 *-* A0A221IWV0_9SOLN) Solyc09g064690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NB-LRR tospovirus immune receptor (AHRD V3.3 *-* A0A221IWU8_SOLHA) Solyc09g064695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LVA2_TRIPR) Solyc09g064720.3 653 437 486 538 240 216 205 215 498 338 457 468 564 492 614 endo-1,31,4-beta-D-glucanase-like (AHRD V3.3 *** A0A2I4F2X5_9ROSI) AT3G23600 Solyc09g064730.3 6 9 19 29 4 2 4 0 14 10 60 40 16 20 39 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6P541_ACTCH) AT3G13140 Solyc09g064740.4 241 195 258 244 249 217 249 188 265 228 155 271 304 225 218 Exonuclease (AHRD V3.3 *** A0A200RBI1_9MAGN) Solyc09g064750.2 3 4 8 25 6 2 2 3 13 11 32 3 14 10 71 Unknown protein Solyc09g064755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1Q935_ARTAN) Solyc09g064760.3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Exonuclease family protein (AHRD V3.3 --* AT2G48100.8) Solyc09g064770.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 F-box-like/WD repeat-containing protein TBL1XR1 (AHRD V3.3 *-* A0A1U8EY19_CAPAN) Solyc09g064780.3 616 618 463 516 447 573 620 504 484 484 468 450 538 633 495 mediator of RNA polymerase II transcription subunit 33A-like (AHRD V3.3 *** A0A2I4F330_9ROSI) Solyc09g064790.3 1130 755 1144 915 664 728 796 541 598 578 1134 646 910 945 1559 Protein PALE CRESS, chloroplastic (AHRD V3.3 *** A0A2G3BLP0_CAPCH) AT2G48120 Solyc09g064800.3 321 557 426 578 640 658 764 685 661 483 529 713 498 558 588 Isoamylase 2, chloroplastic (AHRD V3.3 *** A0A2G3A6V3_CAPAN) AT1G03310 Solyc09g064810.4 155 72 144 80 36 53 33 29 30 54 64 39 40 84 85 ERD (Early-responsive to dehydration stress) family protein (AHRD V3.3 *** A0A1P8B4I8_ARATH) Solyc09g064815.1 5 4 1 3 1 0 0 3 1 0 0 3 2 2 1 Unknown protein Solyc09g064820.1 170 9 24 20 6 3 4 3 21 105 10 68 18 101 354 EID1-like F-box protein 3 (AHRD V3.3 *** A0A2G3BFQ9_CAPCH) AT3G63060 Solyc09g064840.4 3536 3181 2468 3004 2791 2896 2878 3016 2614 3070 2737 2996 2774 3057 2627 HUA2-like protein 2 (AHRD V3.3 *** A0A2G2VZ74_CAPBA) AT2G48160 Solyc09g064850.3 474 330 401 355 304 353 329 230 366 349 471 299 406 405 387 Glutathione peroxidase (AHRD V3.3 *** A0A1U8EDD2_CAPAN) AT2G48150 Solyc09g064860.3 4914 2026 1736 1838 1046 1224 986 1016 1559 1895 1870 1340 2187 1781 2423 ELKS/Rab6-interacting/CAST family protein (AHRD V3.3 *-* AT1G03290.4) AT1G03290 Solyc09g064870.3 699 497 777 528 550 632 515 476 452 453 648 614 436 403 558 DUF21 domain-containing protein (AHRD V3.3 *** A0A2G2VZ76_CAPBA) Solyc09g064880.1 0 0 11 0 0 0 1 0 0 2 0 0 1 0 0 Argonaute family member (AHRD V3.3 *-* A9RG03_PHYPA) Solyc09g064885.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VHP9_9ASPA) ATMG00810 Solyc09g064890.4 667 410 536 463 245 354 386 249 264 275 426 335 354 407 624 Plant organelle RNA recognition domain-containing protein (AHRD V3.3 *-* A0A103YNY2_CYNCS) Solyc09g064900.1 608 334 636 633 393 534 460 320 233 272 530 321 364 449 427 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* AT3G63095.1) Solyc09g064910.1 3 0 13 29 0 0 0 0 1 1 0 0 3 12 27 Adenylate isopentenyltransferase 3, chloroplastic (AHRD V3.3 *** A0A2G3CSB8_CAPCH) AT3G63110 Solyc09g064915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc09g064920.3 875 620 649 485 610 573 651 535 570 562 596 625 610 619 539 transcription factor UNE12-like (AHRD V3.3 *** A0A2I4DEZ5_9ROSI) Solyc09g064925.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g064930.3 753 731 602 834 923 762 752 837 1097 1203 882 1010 1037 883 805 R3H domain protein (AHRD V3.3 *** F4I0U6_ARATH) AT1G03250 Solyc09g064940.2 944 949 608 785 580 503 473 544 1373 2065 821 741 3690 1151 744 Phenazine biosynthesis PhzF protein (AHRD V3.3 *** A0A200Q4V2_9MAGN) AT4G02860 Solyc09g064950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine rich repeat containing protein, putative (AHRD V3.3 *-* Q0KIK0_SOLDE) Solyc09g064960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine rich repeat containing protein, putative (AHRD V3.3 *-* Q0KIK0_SOLDE) Solyc09g064980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *-* G7KRB1_MEDTR) Solyc09g064990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2R6P698_ACTCH) Solyc09g065000.4 1192 402 306 311 169 135 172 132 183 227 390 198 339 342 253 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A2U1ML86_ARTAN) Solyc09g065010.4 669 745 571 526 575 683 639 664 553 577 497 591 592 794 682 mRNA capping enzyme family protein (AHRD V3.3 *** A0A2U1MNN8_ARTAN) Solyc09g065020.4 473 306 275 253 281 340 336 246 244 281 266 278 343 245 422 F-box protein (AHRD V3.3 *** A0A2I0WY04_9ASPA) Solyc09g065025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g065030.3 325 256 408 445 295 350 332 304 421 415 532 383 343 394 376 Protein trichome birefringence-like 11 (AHRD V3.3 *** A0A2G2V2U5_CAPBA) Solyc09g065040.1 23 59 48 59 142 96 83 73 116 42 57 118 27 50 34 Cysteine-rich receptor-like protein kinase (AHRD V3.3 *-* A0A2K3KZ48_TRIPR) Solyc09g065050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g065070.2 0 5 3 28 0 0 2 0 1 2 1 1 15 20 70 Aluminum-activated malate transporter (AHRD V3.3 *** A0A2U1LQV2_ARTAN) Solyc09g065080.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding protein (AHRD V3.3 *** G2X1T0_VERDV) Solyc09g065090.2 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 Cleavage stimulation factor subunit 2 tau variant-like protein (AHRD V3.3 *-* A0A2K3P5M9_TRIPR) Solyc09g065100.3 36 119 48 65 68 50 83 84 195 90 65 144 213 136 120 bHLH transcription factor 150 AT4G09820 Solyc09g065105.1 17 3 9 15 30 17 15 6 12 9 6 8 13 13 29 UBN2_3 domain-containing protein (AHRD V3.3 --* A0A1Q3AR18_CEPFO) Solyc09g065110.4 412 328 460 352 286 292 289 249 235 263 267 348 309 362 237 non-structural protein (AHRD V3.3 *** AT1G03180.5) AT1G03180 Solyc09g065120.4 3115 2617 2770 3051 3694 3692 3756 3221 2088 2359 3027 2687 1761 2528 2988 Preprotein translocase secY subunit (AHRD V3.3 *** B6U7Q0_MAIZE) AT2G31530 Solyc09g065130.4 881 995 906 1028 1569 1359 1456 1377 1291 880 1024 1066 1246 1025 1435 Mitochondrial Rho GTPase (AHRD V3.3 *** A0A2G3BLB2_CAPCH) Solyc09g065140.1 3 15 5 3 19 9 18 20 12 10 4 25 21 15 0 Fantastic four-like protein (AHRD V3.3 *** A0A2K3NF15_TRIPR) Solyc09g065160.4 3600 1503 1103 1207 977 1152 1112 992 1182 2083 1308 1354 773 1172 1424 FZO-like protein (AHRD V3.3 *** AT1G03160.1) AT1G03160 Solyc09g065150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g065170.2 171 289 459 280 324 420 305 345 190 284 256 368 153 324 168 titin-like isoform X2 (AHRD V3.3 *-* A0A2I4FZD3_9ROSI) Solyc09g065180.3 242 840 760 811 886 798 1034 879 1037 528 809 632 567 658 1057 binding protein precursor AF106660 AT3G63140 Solyc09g065190.3 378 769 778 616 992 1035 812 1068 724 563 492 752 557 687 458 Ran GTPase-activating protein 1 (AHRD V3.3 *** A7M8K3_SOLTU) AT3G63130 Solyc09g065200.4 492 525 725 729 463 618 609 474 643 614 913 533 534 478 597 cyclinU3_1 AT3G63120 Solyc09g065210.4 1352 1409 1423 1377 1716 1610 1529 1684 1186 1419 1139 1287 1241 1223 1120 ARM REPEAT PROTEIN INTERACTING WITH ABF2-like (AHRD V3.3 *** A0A2I4GSH6_9ROSI) Solyc09g065230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Copalyl diphosphate synthase (AHRD V3.3 *-* G5CV38_SOLLC) Solyc09g065240.3 327 744 996 747 1263 1294 1052 1420 840 863 641 1143 708 538 735 Patatin (AHRD V3.3 *** A0A2G3CVC2_CAPCH) AT3G63200 Solyc09g065250.2 0 191 105 56 291 253 327 295 117 41 100 205 15 53 18 Mavicyanin (AHRD V3.3 *-* A0A2U1LN39_ARTAN) Solyc09g065260.2 1 33 16 38 4 9 5 8 40 9 15 28 6 18 21 Plastocyanin-like (AHRD V3.3 *-* A0A200QQ44_9MAGN) Solyc09g065270.3 375 539 424 393 589 560 478 601 574 456 455 482 407 484 476 Ribosome recycling factor (AHRD V3.3 *** A0A200Q4W7_9MAGN) AT3G63190 Solyc09g065280.4 2537 1732 1651 1299 1380 1729 1493 1442 1603 1397 1491 1353 1769 1593 1814 pre-mRNA-splicing factor 18 (AHRD V3.3 *** A0A2I4GH45_9ROSI) AT1G03140 Solyc09g065290.4 1897 924 923 816 769 714 668 756 809 1323 864 889 779 894 968 WD40 repeat (AHRD V3.3 *** A0A200QQ89_9MAGN) AT4G02730 Solyc09g065300.4 197 222 280 227 362 297 323 289 285 182 308 217 211 316 335 spindle pole body-associated protein (AHRD V3.3 *** AT4G02725.1) AT4G02725 Solyc09g065310.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G3CIN0_CAPCH) Solyc09g065320.3 0 20 18 18 38 24 31 19 12 2 3 16 4 7 7 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc09g065330.3 2185 4933 4263 2863 4730 4483 4004 4356 2963 2458 3458 3413 5421 4523 3650 40S ribosomal protein S24 (AHRD V3.3 *** A0A1U8H1N3_CAPAN) AT3G04920 Solyc09g065335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc09g065340.3 877 1329 1819 1505 1504 2075 1994 1785 1848 1082 1722 1893 1190 1588 1556 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (AHRD V3.3 *-* A0A2U1KTB4_ARTAN) Solyc09g065350.1 59 96 158 270 109 120 117 115 174 138 188 376 89 183 123 ovate family protein 18 Solyc09g065355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g065360.4 3 0 2 7 1 1 11 6 1 0 4 0 0 0 0 Late embryogenesis abundant protein D-34 (AHRD V3.3 *** A0A2G3BKZ9_CAPCH) Solyc09g065370.3 265 268 230 271 468 378 362 401 276 340 276 307 234 228 176 17.6 kDa class II heat shock protein (AHRD V3.3 *** O23338_ARATH) AT3G22530 Solyc09g065373.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc09g065377.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g065380.2 4171 3333 2125 2964 2464 2522 2723 2706 2642 4032 2059 3047 1981 2526 2227 flocculation FLO11-like protein (AHRD V3.3 *** AT4G02715.2) AT4G02715 Solyc09g150143.1 815 732 772 889 499 763 657 502 356 600 676 550 408 586 780 Unknown protein Solyc09g065387.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GATA zinc finger domain-containing protein 14-like (AHRD V3.3 --* XP_004245404.1) Solyc09g065390.1 64 31 23 39 24 19 17 35 18 33 37 15 24 31 98 DUF581 domain-containing protein (AHRD V3.3 *** A0A1Q3D4G2_CEPFO) Solyc09g065400.2 255 167 124 163 142 220 224 129 174 176 215 145 156 191 203 F-box/kelch-repeat protein SKIP30 (AHRD V3.3 *** A0A1U8EDQ6_CAPAN) AT3G63220 Solyc09g150144.1 23 9 17 4 3 11 5 17 12 5 7 20 7 16 6 Unknown protein Solyc09g065410.4 0 0 0 0 0 2 1 2 0 11 0 6 0 2 0 Non-specific lipid-transfer protein-like protein (AHRD V3.3 *** A0A1J6J624_NICAT) Solyc09g065420.3 0 0 18 4 0 4 0 0 4 0 1 0 0 2 6 Lipid transfer protein (AHRD V3.3 *** G7K520_MEDTR) AT3G22600 Solyc09g065430.4 2 1 3 13 4 2 4 3 11 0 1 7 11 22 4 Lipid transfer protein (AHRD V3.3 *-* B7FGM2_MEDTR) AT2G48130 Solyc09g065440.4 5 2 6 7 0 0 0 0 0 5 14 9 5 16 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *-* A0A2U1NA97_ARTAN) AT2G48140 Solyc09g150145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) ATMG00240 Solyc09g065450.4 0 2 2 0 0 2 1 0 0 0 1 1 2 0 0 Major pollen allergen Ole e 6 (AHRD V3.3 *** A0A2G3CCI9_CAPCH) Solyc09g150146.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* Q8H0I3_PETHY) Solyc09g150147.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200RBS5_9MAGN) Solyc09g065470.3 1 3 7 1 13 25 18 14 5 1 13 1 0 4 5 Vicilin-like antimicrobial peptides 2-1 (AHRD V3.3 *** AMP21_MACIN) AT3G22640 Solyc09g065475.1 61 116 134 128 193 224 195 165 103 96 202 154 52 153 126 Unknown protein Solyc09g065480.2 226 408 316 321 461 539 523 617 314 263 343 543 177 397 149 type I inositol polyphosphate 5-phosphatase 4-like (AHRD V3.3 *** A0A2I4HJ41_9ROSI) AT3G63240 Solyc09g065485.1 29 48 19 39 72 54 58 82 24 63 20 96 13 34 3 Unknown protein Solyc09g065490.2 2 15 6 4 17 10 11 7 16 6 2 6 12 17 22 Unknown protein Solyc09g065510.3 767 573 861 692 629 646 641 608 774 604 739 589 804 837 850 hypothetical protein (AHRD V3.3 *** AT4G04614.2) AT4G04614 Solyc09g065520.4 689 1456 971 1005 1314 1225 1182 1413 1189 1354 959 1306 1504 1373 898 Homocysteine S-methyltransferase (AHRD V3.3 *** A0A200QYH8_9MAGN) AT3G63250 Solyc09g065525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc09g065530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g065540.3 1059 492 480 558 639 610 635 575 495 602 703 400 354 465 646 biotin-binding protein AT1G03090 Solyc09g065550.4 1644 1723 1860 1555 1348 1517 1537 1397 2377 1363 2008 1282 1692 1621 2111 Kinase interacting (KIP1-like) family protein (AHRD V3.3 *** A0A2K3NUK8_TRIPR) Solyc09g065560.3 198 638 191 605 1216 1214 1030 1448 1381 2158 663 1149 1113 700 597 Sulfate transporter (AHRD V3.3 *** Q70BL1_BRAOL) AT3G51895 Solyc09g065565.1 2 1 0 10 9 2 2 8 9 5 0 5 3 2 5 NIMA-related kinase 2 (AHRD V3.3 --* AT3G04810.3) Solyc09g065570.4 80 296 310 583 417 414 476 379 264 386 262 257 373 244 300 Serine/threonine-protein kinase Nek2 (AHRD V3.3 *** A0A1U8G1X8_CAPAN) Solyc09g065580.4 151 131 91 79 88 93 121 110 125 123 56 91 129 109 78 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1LW75_ARTAN) AT3G63290 Solyc09g065590.3 677 1336 1486 1253 1354 1277 975 1229 1699 1039 974 1228 1459 1235 990 Auxin canalization protein (DUF828) (AHRD V3.3 *** Q9LUI0_ARATH) AT3G63300 Solyc09g065600.3 311 561 727 738 845 1061 1076 733 462 378 582 640 598 612 621 GDP-mannose transporter GONST4 (AHRD V3.3 *-* A0A2G2X5U5_CAPBA) Solyc09g065610.2 197 181 390 214 329 314 349 212 158 252 416 175 222 168 158 Bax inhibitor-1 family protein (AHRD V3.3 *-* A0A2U1MW73_ARTAN) Solyc09g065620.3 0 7 31 29 23 19 20 22 11 6 17 3 7 11 1 Chlorophyllase (AHRD V3.3 *** B6DX58_CITLI),Pfam:PF12740 Solyc09g065630.3 1246 1180 1056 1310 1400 1252 1362 1450 1394 1222 1304 1357 1114 1040 1373 Tify domain-containing protein/CCT_2 domain-containing protein (AHRD V3.3 *** A0A1Q3D4M6_CEPFO) AT4G14720 Solyc09g065640.3 3865 3669 4653 4990 4892 5861 5591 5095 3965 4058 5048 4369 3569 4012 4520 ethylene overproducer-like 1 AT4G02680 Solyc09g065650.3 689 674 811 734 560 720 796 586 711 532 607 729 651 821 925 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1QFD7_ARTAN) AT3G63340 Solyc09g150148.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 5 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A1D1ZJR4_9ARAE) Solyc09g065660.4 3 15 13 36 24 20 21 23 32 9 0 68 23 15 17 Heat shock transcription factor (AHRD V3.3 *-* A0A1Y1I763_KLENI) AT3G22830 Solyc09g065665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc09g065670.3 59 61 109 221 464 458 505 578 30 110 56 163 85 113 47 Protein indeterminate-domain 12 (AHRD V3.3 *** A0A2G2X5Z0_CAPBA) Solyc09g065680.1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 Unknown protein Solyc09g065690.4 782 573 552 633 431 530 412 339 437 411 595 355 508 476 694 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1KR35_ARTAN),Pfam:PF13621 AT5G19840 Solyc09g065700.3 1459 1372 1349 1383 1346 1494 1489 1405 1458 1231 1241 1248 945 1370 1478 BEACH domain (AHRD V3.3 *** A0A200Q4J4_9MAGN) AT1G03060 Solyc09g065710.1 21 46 33 35 26 47 47 33 43 53 39 45 39 45 53 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2X5Z3_CAPBA) AT3G63370 Solyc09g065720.4 3209 3489 3092 3097 2798 3066 3027 2968 2777 2575 2840 2958 3566 3455 2871 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *-* A0A1J3HYN5_NOCCA) AT3G63400 Solyc09g065730.3 508 776 870 771 1043 1139 946 1097 888 835 861 1054 866 865 816 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic (AHRD V3.3 *** A0A2G2ZXV1_CAPAN) AT3G63410 Solyc09g065740.2 1 1 12 19 0 0 0 0 1 0 0 0 6 1 1 Ammonium transporter (AHRD V3.3 *** A0A2G2X5Y9_CAPBA) Solyc09g065750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 beta-carotene isomerase D27, chloroplastic-like (AHRD V3.3 *** A0A2I4G2B0_9ROSI) AT1G03055 Solyc09g065755.1 12677 15058 16009 13370 19211 16378 16074 18559 12133 10549 16646 15188 12204 13025 12191 Histone H2A (AHRD V3.3 *** A0A2G2V7F5_CAPBA) AT3G54560 Solyc09g065760.4 324 139 126 142 116 135 89 118 81 175 118 117 89 145 363 DUF506 domain-containing protein (AHRD V3.3 *** A0A1Q3CFM9_CEPFO) Solyc09g065770.1 4 3 4 3 0 0 0 0 0 0 0 0 5 7 0 Protein ELC-like (AHRD V3.3 *** A0A1J3JAC9_NOCCA) AT2G38830 Solyc09g065780.3 62 71 171 99 67 54 56 40 26 41 76 30 32 49 149 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2U1NFY7_ARTAN) Solyc09g065790.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A0K0LX19_9FABA) Solyc09g065800.4 9 91 33 242 3 25 9 6 0 31 0 40 0 34 0 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2U1NFY7_ARTAN) Solyc09g065810.3 644 885 967 978 1001 1167 1184 1064 942 727 784 856 996 1040 1015 Guanylate-binding protein (AHRD V3.3 *** A0A200Q4F7_9MAGN) AT2G38840 Solyc09g065820.4 689 817 1247 905 780 697 660 616 659 648 872 541 969 841 818 bHLH transcription factor 059 AT4G02590 Solyc09g065830.4 2151 2964 2151 2336 2570 2281 2383 2977 2546 2727 2249 2550 2620 2630 2213 NADH dehydrogenase (AHRD V3.3 *** A0A2K3L7L1_TRIPR),Pfam:PF01257 AT4G02580 Solyc09g065840.3 402 508 881 749 349 426 467 450 705 617 855 885 643 734 675 Single-stranded DNA-binding protein (AHRD V3.3 *-* A0A2T6CTD5_9BACT) Solyc09g065850.4 1205 885 678 638 317 283 255 214 729 527 2385 546 579 428 1182 auxin-regulated IAA3 Solyc09g065860.3 431 271 340 349 259 238 291 220 288 333 445 285 284 271 434 Phosphoribulokinase/uridine kinase (AHRD V3.3 *** A0A200Q4F8_9MAGN) AT1G03030 Solyc09g065870.4 188 153 257 249 227 216 209 224 303 334 438 216 147 245 520 E3 ubiquitin-protein ligase RGLG2 (AHRD V3.3 *** A0A2G2ZXW2_CAPAN) AT5G63970 Solyc09g065880.4 66 528 523 626 1030 875 1023 947 535 439 425 827 207 542 243 F-box/LRR-repeat protein 17 (AHRD V3.3 *** A0A2G3CVF9_CAPCH) Solyc09g065885.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc09g065890.4 7 22 15 23 3 5 0 7 22 37 29 13 13 23 35 Phospholipase A1-Igamma2, chloroplastic (AHRD V3.3 *-* A0A2G2VP55_CAPBA) Solyc09g065900.3 1305 1288 1014 1326 1239 1334 1332 1389 1315 1307 925 1105 1496 1057 1018 Glutathione reductase (AHRD V3.3 *** B8PWQ9_SOLLC) AT3G54660 Solyc09g065910.3 499 609 670 624 940 770 656 880 807 639 733 700 526 405 672 Photosystem II reaction center W protein, chloroplastic (AHRD V3.3 *-* A0A1U8H8Q3_CAPAN) Solyc09g065920.3 139 114 114 203 45 64 66 43 96 75 126 23 112 147 302 Magnesium transporter MRS2-I (AHRD V3.3 *** A0A2G2VP57_CAPBA) Solyc09g065930.4 205 236 267 232 188 186 195 178 181 188 246 209 267 262 331 transmembrane protein (AHRD V3.3 *** AT2G41945.2) AT2G41945 Solyc09g065940.4 50 34 78 40 35 73 34 26 29 33 66 25 28 31 74 U6 snRNA-associated Sm-like protein LSm4 (AHRD V3.3 *-* A0A328E599_9ASTE) Solyc09g065950.3 911 874 894 1139 844 1028 1022 884 744 723 1106 737 951 966 996 F-actin-capping protein subunit alpha (AHRD V3.3 *** A0A2G2XXJ8_CAPAN) AT3G05520 Solyc09g150149.1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VJ33_9ASPA) ATMG00810 Solyc09g065990.3 154 212 163 183 226 181 246 174 191 130 120 100 261 269 201 E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *** A0A2G2X5V3_CAPBA) AT2G30580 Solyc09g066000.1 166 129 70 76 87 112 107 76 93 115 84 90 177 134 84 PRA1 family protein (AHRD V3.3 *** A0A2G2X5X1_CAPBA) Solyc09g066005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic translation initiation factor 3 subunit A (AHRD V3.3 *-* A0A2G3AVW5_CAPCH) Solyc09g066010.3 469 524 632 579 902 786 844 762 489 386 520 468 523 377 406 WRKY transcription factor 24 AT2G30590 Solyc09g066030.2 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc09g066035.1 0 3 6 5 3 13 3 5 5 3 15 1 3 3 0 Unknown protein Solyc09g066040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g066050.2 1 0 0 0 13 2 3 5 1 0 0 3 0 4 3 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc09g066060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc09g066070.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc09g066080.3 360 184 221 225 92 94 139 74 184 164 223 160 178 225 350 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein (AHRD V3.3 *** A0A1J3EMZ5_NOCCA) AT1G04020 Solyc09g066085.1 0 0 2 0 0 0 4 0 2 1 0 0 0 0 0 Unknown protein Solyc09g066100.3 5200 9747 8301 8230 12869 11647 9852 15306 9919 10409 8800 12624 4843 7376 5622 Histone H1 (AHRD V3.3 *-* A0A2G2WIH1_CAPBA) AT2G30620 Solyc09g066110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g066120.4 1165 697 530 609 422 510 448 442 417 471 512 451 568 587 559 RNA-binding KH domain-containing protein (AHRD V3.3 *** A0A2U1LYS9_ARTAN) AT3G04610 Solyc09g066130.4 677 720 773 643 718 868 818 665 503 439 606 489 700 684 629 Carbohydrate kinase PfkB (AHRD V3.3 *** A0A200Q4B8_9MAGN) Solyc09g066140.3 187 118 98 114 121 154 174 174 167 136 112 151 129 160 217 myosin-binding protein 1-like (AHRD V3.3 *-* A0A2I4FM60_9ROSI) Solyc09g066150.2 0 0 0 12 0 0 0 0 0 0 0 0 0 1 47 Cytochrome P450 (AHRD V3.3 *** A0A200Q4A2_9MAGN) Solyc09g150150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc09g066160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g066180.2 1 0 1 0 0 0 0 0 0 3 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc09g066190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g066200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g066210.4 486 293 204 385 285 239 280 331 256 593 247 395 278 241 212 F-box/kelch-repeat protein OR23 (AHRD V3.3 *** A0A1U8G316_CAPAN) AT4G03030 Solyc09g066250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcriptional regulator TAC1 (AHRD V3.3 *** A0A2G3CVB5_CAPCH) AT3G09290 Solyc09g066260.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein (AHRD V3.3 *** A0A2U1NMH9_ARTAN) AT2G42430 Solyc09g066270.3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein 20 (AHRD V3.3 *** A0A1U8F2P2_CAPAN) AT3G58190 Solyc09g066280.4 537 651 734 834 681 773 817 600 1077 403 794 520 564 871 1218 Transcription factor bHLH155-like protein (AHRD V3.3 *** A0A2K3NNU4_TRIPR) AT1G06150 Solyc09g066290.3 343 393 196 178 162 133 153 159 220 151 123 200 356 378 219 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1Q0B3_ARTAN) AT2G31240 Solyc09g066300.3 2 4 1 13 29 10 20 14 8 0 13 14 10 4 9 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1Q188_ARTAN) Solyc09g066310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NR61_ARTAN) Solyc09g066320.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NR61_ARTAN) Solyc09g066323.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) Solyc09g066325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g066327.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) Solyc09g066330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase APG (AHRD V3.3 *-* A0A2G2WRC2_CAPBA) Solyc09g066340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2X5X7_CAPBA) Solyc09g066350.1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2X630_CAPBA) Solyc09g066360.1 20 8 19 10 0 0 0 0 0 9 41 0 2 18 1 Ethylene Response Factor C.3 Solyc09g066370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G3ABE0_CAPAN) Solyc09g066390.1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 Unknown protein Solyc09g066400.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G3ABE0_CAPAN) Solyc09g066405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Prolyl oligopeptidase family protein (AHRD V3.3 *-* A0A2U1MSY8_ARTAN) Solyc09g066410.3 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 Phosphate transporter (AHRD V3.3 *** Q9AYT3_TOBAC) Solyc09g066420.3 146 183 89 132 157 153 122 164 161 121 52 117 202 165 122 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1P1B5_ARTAN) AT2G20440 Solyc09g066430.3 1558 3317 3186 2370 3132 3148 3321 2827 2154 1575 2850 2242 3840 3251 3239 Ribosomal protein L14 (AHRD V3.3 *** A0A200PVX1_9MAGN) AT2G20450 Solyc09g066440.4 722 779 686 760 755 820 921 850 932 638 624 709 1007 789 855 Casein kinase I (AHRD V3.3 *** A0A2U1P195_ARTAN) Solyc09g066450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor GRAS (AHRD V3.3 *** A0A2U1MEJ8_ARTAN) Solyc09g066460.4 687 583 439 347 406 311 316 401 525 490 425 556 579 531 478 Serine/threonine-protein kinase (AHRD V3.3 *** A0A2I0WHR6_9ASPA) AT1G03920 Solyc09g066470.4 489 634 646 658 680 864 898 684 840 722 773 647 823 609 742 ABC transporter-like (AHRD V3.3 *** A0A200PW10_9MAGN) AT1G03905 Solyc09g066480.2 971 1012 1342 1093 1106 1401 1353 1178 1210 800 1185 971 1002 1313 1374 Protein CHROMATIN REMODELING 8 (AHRD V3.3 *-* A0A2G2VY38_CAPBA) Solyc09g066490.4 345 682 952 909 840 980 945 845 954 710 825 765 858 857 933 Adaptin ear-binding coat-associated protein (AHRD V3.3 *-* A0A2K3NQR5_TRIPR) Solyc09g066500.4 2300 4957 4152 3638 5131 4084 4284 4127 2765 2709 3208 3237 5444 4394 3298 H/ACA ribonucleoprotein complex subunit 3 (AHRD V3.3 *** A0A2G3CE14_CAPCH) AT2G20490 Solyc09g025310.4 14 2 11 9 0 0 4 0 6 7 28 2 3 1 2 NAC domain-containing protein (AHRD V3.3 *** A0A2U1P959_ARTAN) AT4G28530 Solyc09g025280.1 157 405 316 440 955 1057 1002 1058 353 236 419 650 604 424 259 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like (AHRD V3.3 *** A0A2I4HVR1_9ROSI) Solyc09g025270.3 948 1420 1091 943 1578 1491 1709 1864 2271 1158 1002 1107 1101 1056 842 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CV88_CAPCH) AT3G54790 Solyc09g025260.4 277 630 607 550 465 444 499 465 593 292 448 467 695 686 565 Rho termination factor (AHRD V3.3 *** A0A200PW00_9MAGN) AT1G06190 Solyc09g025250.4 210 551 620 444 664 768 730 647 432 361 459 388 877 666 620 Peptidase S24/S26A/S26B/S26C family protein (AHRD V3.3 *** A0A2U1NVF7_ARTAN) AT1G06200 Solyc09g025240.3 1848 1377 1363 1224 1362 1129 1001 1193 1653 1590 1400 1343 1900 1520 1443 ENTH/VHS, Target of Myb protein 1 (AHRD V3.3 *** A0A2U1P985_ARTAN) AT1G06210 Solyc09g025230.4 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 patellin-4-like (AHRD V3.3 *** A0A2I4F6C8_9ROSI) Solyc09g025235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g025220.2 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 11S globulin seed storage protein 2 (AHRD V3.3 *** A0A2G2X5V4_CAPBA) Solyc09g025210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 alcohol dehydrogenase-2 AT5G44120 Solyc09g025215.1 0 0 0 0 0 0 1 0 0 0 0 6 0 0 0 Unknown protein Solyc09g025200.2 1 0 0 1 0 0 0 1 1 0 0 0 5 0 0 Ribosomal protein L18 (AHRD V3.3 *-* A8IKZ2_CHLRE) Solyc09g072500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g072530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g072540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g072550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g072560.4 0 0 0 0 0 1 0 3 0 3 0 0 0 0 0 11S globulin seed storage protein 2 (AHRD V3.3 *** A0A2G2X5V4_CAPBA) Solyc09g072570.3 1959 1471 1118 1091 1167 1301 1222 1341 1698 1243 1309 1329 1678 1592 1235 Pre-mRNA-splicing factor SLU7 (AHRD V3.3 *** A0A2G2WMV0_CAPBA) AT1G65660 Solyc09g072580.3 108 111 137 100 134 173 158 134 103 123 139 105 98 113 140 histone acetyltransferase subunit NuA4-domain protein (AHRD V3.3 *** AT4G14385.8) Solyc09g072590.3 92 55 115 232 49 62 52 25 77 91 118 30 59 78 273 actin-depolymerizing factor (AHRD V3.3 *** A0A2I4EMY6_9ROSI) AT2G31200 Solyc09g072593.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc09g072595.1 0 2 0 0 0 5 0 1 1 1 0 2 0 0 0 Unknown protein Solyc09g072597.1 24 9 9 8 30 29 25 24 18 14 0 10 11 24 4 Tubulin beta chain (AHRD V3.3 *-* A0A0A7H7B4_MARPO) Solyc09g072600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin-depolymerizing factor (AHRD V3.3 *-* A0A1U8GD07_CAPAN) Solyc09g072610.3 313 248 209 206 164 183 164 202 297 261 293 197 236 275 391 Long-chain-alcohol oxidase (AHRD V3.3 *** A0A2G2X4S2_CAPBA) AT4G28570 Solyc09g072620.4 597 641 793 942 890 889 893 793 791 750 787 659 683 718 904 Glutathione gamma-glutamylcysteinyltransferase 1 (AHRD V3.3 *** A0A2G2V9J5_CAPBA) AT5G44070 Solyc09g072630.3 158 193 460 458 277 354 193 356 301 411 194 616 62 260 124 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *-* A0A2R6RNV3_ACTCH) AT4G28560 Solyc09g072640.3 107 40 83 115 43 67 59 34 88 91 175 28 109 59 127 CRIB domain-containing protein RIC6 (AHRD V3.3 *** A0A2G2V9K8_CAPBA) AT4G28556 Solyc09g072650.4 335 262 353 462 179 208 229 225 508 321 247 335 303 317 686 tetratricopeptide repeat protein 7A-like (AHRD V3.3 *** A0A2I4F6F8_9ROSI) AT4G28600 Solyc09g072660.4 8 33 15 39 65 40 53 77 41 30 27 38 12 10 78 FAD-binding Berberine family protein (AHRD V3.3 *** A0A1P8AT94_ARATH) AT1G30760 Solyc09g072670.3 357 438 598 522 541 556 646 469 588 393 484 408 397 510 512 Rho GDP-dissociation inhibitor 1 (AHRD V3.3 *** A0A2G3BZI0_CAPCH) Solyc09g072680.2 291 154 232 218 110 113 106 118 112 163 173 84 278 219 262 F-box domain (AHRD V3.3 *** A0A200Q000_9MAGN) Solyc09g072690.1 55 30 64 117 2 6 1 1 42 52 56 15 18 34 42 Cation/calcium exchanger 1 (AHRD V3.3 *** A0A2G2ZWJ1_CAPAN) AT5G17860 Solyc09g072700.4 5 25 4 6 46 30 32 33 2 9 3 0 0 1 0 Peroxidase (AHRD V3.3 *** K4CUU6_SOLLC) AT4G26010 Solyc09g072710.4 604 1043 730 927 881 830 980 914 1595 1111 1255 1525 1059 1153 1148 Phospholipid--sterol O-acyltransferase (AHRD V3.3 *** A0A2G2ZWL8_CAPAN) AT1G04010 Solyc09g072720.3 4 39 1 16 3 14 10 3 68 67 41 132 8 24 1 exocyst complex component EXO84B-like (AHRD V3.3 *** A0A2I4F693_9ROSI) Solyc09g150151.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc09g072730.2 63 54 53 29 32 45 38 33 41 33 56 35 38 30 6 Zinc finger, GRF-type (AHRD V3.3 *-* A0A2U1LVQ4_ARTAN) AT2G07505 Solyc09g072750.2 16122 19135 20736 18958 13734 14352 15313 16055 20245 34761 20130 17728 20894 7394 10533 Unknown protein Solyc09g072753.1 12357 19825 25866 15386 23269 28658 25840 23675 22944 30925 21247 16590 17089 6911 13469 Proteasome endopeptidase complex (AHRD V3.3 *-* A0A2G3BI76_CAPCH) AT2G41390 Solyc09g072757.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc09g072770.1 1275 1239 617 741 0 1 2 11 40 155 93 20 1354 276 296 Pollen Ole e 1 allergen and extensin family protein (AHRD V3.3 *-* F4IK06_ARATH) AT2G41390 Solyc09g072775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein NRT1/ PTR FAMILY 5.2 (AHRD V3.3 *** A0A2G3CU52_CAPCH) Solyc09g072790.3 102 140 222 170 174 184 165 182 153 139 220 150 260 228 159 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4K4W6_ARATH) Solyc09g072800.3 238 1124 1182 1304 2324 2539 2377 2447 1195 576 1123 1319 189 665 720 Eisosome protein (AHRD V3.3 *** F4I444_ARATH) AT1G04030 Solyc09g072810.3 255 510 479 509 335 359 249 365 531 594 405 455 357 342 270 Receptor protein kinase, putative (AHRD V3.3 *** B9SKP2_RICCO) Solyc09g072820.4 20 321 150 202 290 188 174 194 191 270 182 151 57 113 510 Cellulose synthase (AHRD V3.3 *** K4CUV8_SOLLC) AT5G44030 Solyc09g072830.4 1399 1599 1213 1234 1334 1357 1262 1585 1455 1630 973 1482 2074 1598 1251 Transcription repressor KAN1 (AHRD V3.3 *** A0A2G2X4M7_CAPBA) AT4G28610 Solyc09g072840.3 0 0 7 0 0 0 0 0 0 1 0 0 0 0 0 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 --* AT3G06130.2) Solyc09g072860.2 141 141 152 202 228 170 209 250 132 152 140 151 150 204 171 Fanconi anemia group F protein (FANCF) (AHRD V3.3 *** A0A1P8B9K4_ARATH) AT5G44010 Solyc09g072865.1 1669 2983 3204 2383 3399 3948 3965 3471 2015 1736 2363 2333 3562 3019 2805 Ribosomal protein L17 (AHRD V3.3 *** Q5I7K4_WHEAT) AT2G33370 Solyc09g072880.3 449 497 564 447 568 523 533 536 574 506 620 630 503 592 456 Protein FLUORESCENT IN BLUE LIGHT, chloroplastic (AHRD V3.3 *** A0A1U8GA42_CAPAN) AT3G14110 Solyc09g150152.1 6 3 11 13 0 19 13 0 2 11 0 3 11 0 13 Unknown protein Solyc09g072890.2 560 467 450 482 553 697 666 675 576 645 422 668 343 494 467 Histone-lysine N-methyltransferase SUVR4 (AHRD V3.3 *** A0A2G2ZWL6_CAPAN) AT5G43990 Solyc09g072900.4 647 526 470 366 403 363 344 372 587 465 439 529 418 613 477 endo-1,31,4-beta-D-glucanase-like (AHRD V3.3 *** A0A2I4F2X5_9ROSI) AT3G23600 Solyc09g072910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) AT3G23880 Solyc09g072930.1 42 13 6 3 1 7 7 4 5 13 6 1 31 11 6 F-box associated interaction domain-containing protein (AHRD V3.3 *** A0A2U1PHV7_ARTAN) AT3G23880 Solyc09g072935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g072950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 pectinesterase inhibitor-like (AHRD V3.3 *** A0A1U8G8K1_CAPAN) AT3G17220 Solyc09g072970.3 454 603 827 555 761 738 822 641 411 432 634 541 829 669 610 U6 snRNA-associated Sm-like protein LSm2 (AHRD V3.3 *** A0A2G2ZWI3_CAPAN) AT1G03330 Solyc09g072980.2 1606 912 817 903 938 984 970 955 919 1352 860 1156 784 795 652 BTB/POZ and MATH domain-containing protein 2-like (AHRD V3.3 *** A0A2G2ZWI9_CAPAN) AT3G06190 Solyc09g072990.3 958 1297 851 1026 1386 1351 1305 1155 869 782 777 684 1017 817 795 hypothetical protein (AHRD V3.3 *** AT4G02920.1) AT4G02920 Solyc09g073000.3 1483 2758 2226 1795 2114 2100 2046 2276 1904 1415 1492 1860 3341 2978 2146 Elongation factor Tu (AHRD V3.3 *** A0A2G2VZZ7_CAPBA) AT4G02930 Solyc09g073010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphate transporter protein (AHRD V3.3 *** A0A0E3IET4_WHEAT) Solyc09g073015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flavin-containing monooxygenase (AHRD V3.3 *-* A0A2G2YF03_CAPAN) Solyc09g073020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g073030.4 46 57 38 41 21 23 16 5 28 40 96 17 61 33 69 Unknown protein Solyc09g073040.3 23 10 15 1 0 0 1 0 5 22 23 1 48 7 8 Unknown protein Solyc09g074040.1 352 214 433 385 133 85 60 88 175 217 210 126 568 413 563 Unknown protein Solyc09g074050.3 483 454 332 598 297 257 222 266 460 338 328 244 613 567 535 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein (AHRD V3.3 *-* G5DX62_SILLA) AT4G02940 Solyc09g074060.3 994 1059 1143 902 757 937 879 988 1357 787 1174 877 1099 897 835 BSD domain-containing protein (AHRD V3.3 *-* A0A1Q3CF56_CEPFO) AT1G03350 Solyc09g074070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g074080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Hexosyltransferase (AHRD V3.3 *** A0A1U8G9E1_CAPAN) AT3G06260 Solyc09g074090.3 285 460 474 397 386 340 422 309 255 225 409 391 480 525 465 Exosome complex component RRP4 (AHRD V3.3 *** A0A2G3CU05_CAPCH) AT1G03360 Solyc09g074100.4 2949 966 559 542 278 344 399 378 369 745 572 508 427 606 564 tRNA-specific 2-thiouridylase MnmA (AHRD V3.3 *** A0A1J3F5F7_NOCCA),Pfam:PF03054 AT1G51310 Solyc09g074110.4 1342 1150 1219 1351 1245 1302 1429 1273 1566 1444 1308 1411 973 1422 1499 Piezo-type mechanosensitive ion channel-like protein (AHRD V3.3 *** A0A2G2ZWF8_CAPAN) AT2G48060 Solyc09g074120.3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LIK0_ARTAN) Solyc09g074130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LIK0_ARTAN) Solyc09g074140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LIK0_ARTAN) Solyc09g074150.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B7R5_ARATH) Solyc09g074160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1Y1HNV9_KLENI),Pfam:PF13920 Solyc09g074170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* AT4G03000.6) Solyc09g074180.3 212 350 319 290 190 206 170 191 129 139 254 162 355 367 325 Unknown protein Solyc09g150153.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g074190.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LIK0_ARTAN) Solyc09g074200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LIK0_ARTAN) Solyc09g074205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc09g074210.3 107 83 102 46 42 42 27 54 66 113 80 70 208 71 100 DNAse I-like superfamily protein (AHRD V3.3 *** A0A2U1Q9H2_ARTAN) AT2G48030 Solyc09g074230.4 51 248 122 276 149 167 164 211 323 88 119 229 179 267 128 SlSFP7 AT2G48020 Solyc09g074235.1 13 0 2 1 4 2 3 2 1 1 13 1 0 0 0 Unknown protein Solyc09g074240.1 369 266 297 274 200 324 250 227 302 275 398 296 251 291 266 Protein kinase domain (AHRD V3.3 *** A0A200Q1S8_9MAGN) AT2G48010 Solyc09g074250.3 75 61 29 80 12 20 28 18 24 52 47 15 65 54 84 Protein kinase family protein (AHRD V3.3 *** A0A2U1N2H6_ARTAN) AT5G35960 Solyc09g074260.1 53 133 185 145 129 142 107 99 113 123 141 107 138 99 37 Leucine-rich repeat receptor-like kinase (AHRD V3.3 *** A0A0K9PKL2_ZOSMR) AT1G03440 Solyc09g074270.3 2831 1549 2534 1808 453 620 343 582 1405 3283 3139 1632 2240 1550 1555 Gibberellin receptor (AHRD V3.3 *** E3VJP7_9FABA) AT3G63010 Solyc09g074280.1 70 26 20 14 0 0 0 0 2 9 36 2 27 43 26 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1QG31_ARTAN) Solyc09g074290.1 1 8 5 0 3 1 2 1 0 0 0 4 1 0 0 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1QG31_ARTAN) Solyc09g074300.1 36 924 613 748 942 764 701 1098 427 514 439 937 221 660 171 Histone H2A (AHRD V3.3 *** A0A1U8GAC7_CAPAN) Solyc09g074310.3 155 183 338 312 239 263 310 211 199 170 317 226 158 212 202 Aldo-keto reductase (AHRD V3.3 *** A0A2U1PVJ5_ARTAN) Solyc09g074320.3 1405 1235 1024 1082 944 927 1086 1129 1122 1197 1014 981 1543 1197 1029 Serine/threonine-protein phosphatase (AHRD V3.3 *** G8Z285_SOLLC) AT4G03080 Solyc09g074330.3 1108 810 752 780 687 724 777 787 824 842 835 869 736 823 673 Sequence-specific DNA binding transcription factor ATNDX (AHRD V3.3 *** A0A1P8B7M0_ARATH) AT4G03090 Solyc09g074340.3 487 454 397 294 311 402 381 362 267 273 253 302 237 319 216 Rho GTPase-activating protein 2 (AHRD V3.3 *** A0A2G3CTX8_CAPCH) AT4G03100 Solyc09g074350.1 1 16 9 2 5 20 8 22 0 0 0 0 0 3 4 phosphopantothenoylcysteine decarboxylase subunit VHS3 (AHRD V3.3 -** XP_020426366.1) Solyc09g074360.4 2719 2033 2471 1991 1932 2131 2123 1917 1653 1686 2607 1954 1597 1781 2043 RNA binding protein (AHRD V3.3 *** B6UFA0_MAIZE) AT4G03110 Solyc09g074370.4 157 156 191 201 180 188 210 185 124 146 217 219 132 176 235 Mitochondrial substrate carrier family protein (AHRD V3.3 *** F4JI50_ARATH) AT4G03115 Solyc09g074380.4 1690 856 740 617 570 509 560 576 868 674 737 824 814 795 570 DCD (Development and Cell Death) domain protein (AHRD V3.3 *-* F4IUS3_ARATH) AT2G32910 Solyc09g074390.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200Q1P9_9MAGN) Solyc09g074400.3 1780 1231 880 836 764 752 720 720 841 932 632 778 1254 1121 1012 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A1P8B6P4_ARATH) AT2G26060 Solyc09g074410.4 267 368 326 346 225 312 312 262 402 313 329 329 370 336 325 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1L0Y3_ARTAN),Pfam:PF13561 AT4G03140 Solyc09g074420.4 728 755 702 884 864 823 908 884 727 685 704 682 615 754 751 Protease Do-like 2, chloroplastic (AHRD V3.3 *** A0A2G2VZY0_CAPBA) AT2G47940 Solyc09g074430.4 12 58 31 53 239 193 213 198 39 41 13 48 98 37 6 Flavin-containing monooxygenase (AHRD V3.3 *** D2IGV5_SOLLC) Solyc09g074440.3 0 0 0 0 8 0 5 12 0 0 0 0 0 0 0 Defensin-like protein (AHRD V3.3 --* A0A2P4MS75_QUESU),Pfam:PF00304 Solyc09g074450.1 195 1112 149 1069 2148 1494 1950 2015 338 662 146 533 368 296 109 Classical arabinogalactan protein 26 (AHRD V3.3 *-* A0A2G3CCP4_CAPCH) AT2G47930 Solyc09g074460.3 4039 2699 2381 2418 2681 2874 2386 2840 3193 3666 2524 2905 2369 2066 2264 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PFG2_ARTAN) AT5G64920 Solyc09g074470.3 43 541 568 684 1392 1288 1373 1306 715 300 637 753 87 292 323 Kinase interacting (KIP1-like) protein (AHRD V3.3 *** A0A2K3LEM5_TRIPR) AT1G03470 Solyc09g074475.1 61 41 13 18 36 60 41 37 37 23 16 55 11 20 17 Unknown protein Solyc09g074500.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g074510.3 2501 2629 2750 3030 2518 2777 3076 2587 2612 2670 2179 2720 2856 2883 2418 Tubby-like F-box protein (AHRD V3.3 *** A0A200QX79_9MAGN) AT2G47900 Solyc09g074520.3 3692 2924 2889 3206 3358 3246 3227 3309 2746 4104 2807 3634 2111 2410 2621 Protein TRANSPORT INHIBITOR RESPONSE 1 (AHRD V3.3 *** A0A2G3CTS6_CAPCH) AT3G62980 Solyc09g074530.3 0 0 0 3 0 0 0 0 0 0 2 0 0 0 15 Bidirectional sugar transporter SWEET (AHRD V3.3 *** M1ASY4_SOLTU) Solyc09g074550.3 98 90 111 186 52 82 44 57 131 106 148 83 245 199 200 CASP-like protein (AHRD V3.3 *** A0A2U1NML5_ARTAN) Solyc09g074560.3 881 511 927 791 121 160 108 105 582 604 1319 518 1167 908 1813 Zinc finger protein CONSTANS-LIKE 15 (AHRD V3.3 *** A0A2G3CTS9_CAPCH) AT2G47890 Solyc09g074570.1 38 147 61 206 4 15 5 8 31 109 79 38 49 29 120 Glutaredoxin (AHRD V3.3 *** B3F8F2_SOLTU) Solyc09g074575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc09g074580.1 3 1 0 0 0 0 0 0 0 2 0 0 0 0 0 Glutaredoxin (AHRD V3.3 *** A0A2G9H0Z3_9LAMI) AT3G62950 Solyc09g074590.1 2 0 0 1 0 0 0 0 2 2 2 2 1 0 0 Monothiol glutaredoxin-S2 (AHRD V3.3 *** A0A2G2VZS0_CAPBA) Solyc09g074600.2 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 Monothiol glutaredoxin-S2 (AHRD V3.3 *** A0A2G2VZS0_CAPBA) Solyc09g074610.3 27 49 34 49 59 68 53 60 68 28 26 14 33 19 62 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G3CTT7_CAPCH) AT4G09350 Solyc09g074620.3 88 72 114 115 58 84 62 76 108 112 105 102 89 100 155 zinc metalloproteinase aureolysin (AHRD V3.3 *** AT3G62920.1) AT3G62920 Solyc09g074630.3 7 117 144 77 385 322 378 293 196 99 86 124 88 117 295 BTB domain-containing protein/NPH3 domain-containing protein (AHRD V3.3 *** A0A1Q3CT76_CEPFO) AT1G03010 Solyc09g074640.3 4582 3126 3602 4708 4117 4298 4294 3562 3076 4477 4073 4106 3760 3414 5275 Zinc finger transcription factor 54 AT2G47850 Solyc09g074650.3 780 431 521 368 309 357 356 339 331 312 356 348 305 458 542 Peptide chain release factor 1 (AHRD V3.3 *** A0A1U8G2X0_CAPAN) AT3G62910 Solyc09g074660.3 672 418 346 328 289 291 293 282 421 480 276 412 333 444 482 spermatogenesis-associated protein 20 (AHRD V3.3 *** A0A2I4GIU1_9ROSI) AT4G03200 Solyc09g074670.4 1370 912 975 825 676 729 723 610 1189 1203 1092 743 865 1022 951 Zinc finger, CW-type (AHRD V3.3 *-* A0A2U1Q0I4_ARTAN) AT3G62900 Solyc09g074675.1 22 13 49 19 24 40 38 24 16 15 48 18 25 23 23 Unknown protein Solyc09g074680.3 777 1013 990 831 1000 1047 1054 1140 1053 866 938 887 1124 1074 857 Cullin (AHRD V3.3 *** A0A2U1Q0J3_ARTAN) Solyc09g074690.3 181 186 106 128 188 117 117 154 159 139 73 127 148 155 159 Homeobox protein LUMINIDEPENDENS (AHRD V3.3 *-* A0A2G2W002_CAPBA) Solyc09g074700.2 121 122 100 83 102 112 111 107 134 111 39 106 108 103 113 Homeobox protein LUMINIDEPENDENS (AHRD V3.3 *-* A0A2G2ZWA4_CAPAN) Solyc09g074710.2 818 852 903 884 671 838 868 601 795 568 1115 712 866 896 1068 Homeobox protein LUMINIDEPENDENS (AHRD V3.3 *-* A0A2G2ZWA4_CAPAN) Solyc09g074730.3 1558 724 685 768 400 643 710 375 504 465 609 465 558 806 891 Homeobox protein LUMINIDEPENDENS (AHRD V3.3 *** A0A2G3CTU2_CAPCH) AT4G02560 Solyc09g074740.2 79 47 27 18 27 13 16 14 27 33 25 15 29 21 38 Cation efflux family protein (AHRD V3.3 *-* A0A2U1NZ88_ARTAN) Solyc09g074750.3 190 109 167 122 84 58 108 56 94 83 128 62 95 151 158 Metal tolerance protein C1 (AHRD V3.3 *** A0A2G2ZW60_CAPAN) Solyc09g074760.1 14 16 11 8 0 1 0 2 0 6 6 3 0 0 0 Nuclear transcription factor Y subunit B-3 (AHRD V3.3 *** A0A2G2ZW85_CAPAN) AT2G47810 Solyc09g150154.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PNF5_TRIPR) Solyc09g074780.3 146 60 58 74 18 8 16 25 67 102 141 27 23 64 196 Protein indeterminate-domain 2 (AHRD V3.3 *** A0A1U8G2Y2_CAPAN) Solyc09g074785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc09g074790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Potassium transporter (AHRD V3.3 *** A0A2G2VZV1_CAPBA) Solyc09g074800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Potassium transporter (AHRD V3.3 *** A0A2G2VZV1_CAPBA) Solyc09g074805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A1P8BCN7_ARATH) AT4G25400 Solyc09g074820.4 0 0 12 0 0 0 8 0 2 0 0 0 0 0 0 Potassium transporter (AHRD V3.3 *** A0A2G3CTQ8_CAPCH) Solyc09g074830.3 72 231 193 174 426 386 397 413 171 100 153 287 115 206 132 protein kinase WEE1 AT1G02970 Solyc09g074840.4 327 273 355 312 314 284 337 344 392 350 186 292 249 332 299 kinetochore protein (AHRD V3.3 *-* AT1G02960.5) AT1G02960 Solyc09g074850.4 463 375 542 571 356 530 600 359 326 385 478 367 347 432 581 Glutathione S-transferase (AHRD V3.3 *** A0A2G3CTS1_CAPCH) AT2G47730 Solyc09g150155.1 224 446 545 635 740 758 800 536 458 332 530 522 647 508 556 Cytochrome b-c1 complex subunit 6 (AHRD V3.3 *** A0A2G2ZW44_CAPAN) AT2G01090 Solyc09g074870.4 870 1150 1682 1353 1393 1301 1468 1150 963 1048 1305 950 1463 1245 1487 Aldose 1-epimerase (AHRD V3.3 *-* A0A1U8FSY0_CAPAN) AT1G15120 Solyc09g074880.4 86 212 153 202 259 255 253 261 210 125 292 315 167 186 223 Protein LOW PSII ACCUMULATION 1, chloroplastic (AHRD V3.3 *** A0A2G2W035_CAPBA) AT1G02910 Solyc09g074890.1 3 4 9 0 6 0 1 3 3 8 28 2 0 6 2 Rapid ALkalinization Factor (AHRD V3.3 *** A0A200QWN9_9MAGN) AT1G02900 Solyc09g074900.4 685 593 615 676 532 590 623 572 412 610 577 557 630 586 622 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (AHRD V3.3 *** A0A1U8GCH1_CAPAN) AT2G47760 Solyc09g074910.1 153 77 48 49 78 53 66 73 41 87 61 111 88 107 124 Peripheral-type benzodiazepine receptor (AHRD V3.3 *** Q6A151_SOLTU) AT2G47770 Solyc09g074920.3 110 124 147 145 116 124 112 93 126 89 149 116 112 136 109 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1PRS2_ARTAN) AT4G02485 Solyc09g074930.3 5968 2446 2616 2244 2509 1888 2215 2594 4601 4651 4165 3239 1432 1927 2865 REF/SRPP-like protein (AHRD V3.3 *** A0A2G3CTD5_CAPCH) Solyc09g074940.3 1386 2387 2051 1696 1664 1866 2017 2083 2205 1589 1360 1845 2106 2101 1937 (DB240) meloidogyne-induced giant cell protein AT4G02510 Solyc09g074950.3 2637 2650 2702 2772 2547 2554 2657 2793 2509 2291 2324 2308 2563 2620 2660 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1N2C4_ARTAN) AT4G02480 Solyc09g074960.1 0 1 0 6 0 2 0 0 0 0 6 0 0 0 0 Yellow stripe-like protein (AHRD V3.3 *** A0A2D1UXE7_ROSHC) Solyc09g074970.3 98 244 217 194 388 434 455 359 364 89 264 204 222 303 163 Thiamine pyrophosphokinase (AHRD V3.3 *** A0A2G2W0D5_CAPBA) AT1G02880 Solyc09g074990.4 358 433 328 325 495 484 431 534 445 250 240 408 455 444 292 DNA mismatch repair protein PMS1 (AHRD V3.3 *** A0A1U8FBY8_CAPAN) AT4G02460 Solyc09g075000.3 755 642 656 515 521 465 523 536 523 576 529 624 650 597 640 WD40 repeat (AHRD V3.3 *** A0A200QWQ4_9MAGN) AT2G47790 Solyc09g075010.3 3672 4212 4299 3161 3805 4354 3968 3851 3623 2818 3701 3469 5854 5305 4206 HSP20-like chaperones superfamily protein (AHRD V3.3 *-* F4JHJ0_ARATH) AT4G02450 Solyc09g075015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g075020.3 10363 7351 6691 5393 3752 3732 3480 3917 4141 9796 6022 3939 14700 8379 6194 ABC transporter C family member 4 (AHRD V3.3 *** A0A2G2ZW52_CAPAN) AT2G47800 Solyc09g075030.3 1575 1645 1613 1129 1214 1221 1333 1008 971 902 1324 1096 1790 1707 1842 nucleolar protein 16-like (AHRD V3.3 *** A0A2I4E2F5_9ROSI) AT1G02870 Solyc09g075040.3 62 33 32 56 85 43 67 49 50 33 39 39 54 60 66 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-like protein (AHRD V3.3 *** B3H7B1_ARATH) AT1G02860 Solyc09g075043.1 0 0 0 0 0 3 0 1 3 0 0 0 0 0 0 Unknown protein Solyc09g075045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g075047.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc09g075050.3 0 0 2 4 1 4 1 3 2 1 0 3 0 0 0 Unknown protein Solyc09g075060.3 11 1 0 5 2 1 0 2 7 7 13 4 4 0 20 Beta-glucosidase 10 (AHRD V3.3 *** A0A2G2ZW54_CAPAN) AT1G02850 Solyc09g075070.3 125 160 244 234 190 136 137 218 170 139 157 196 110 194 239 Beta-glucosidase 1 (AHRD V3.3 *** A0A1U8F8A5_CAPAN) AT1G02850 Solyc09g075080.3 279 378 236 361 437 505 400 433 364 317 179 254 433 253 279 Phytochrome A-associated F-box protein (AHRD V3.3 *** A0A2G2W0F9_CAPBA) AT4G02440 Solyc09g075090.1 4020 2801 2076 1732 1706 1592 1509 1996 1970 2317 1705 2448 2287 2253 1815 Serine/arginine-rich-splicing factor SR34 (AHRD V3.3 *** A0A0M8KT32_NICAT) AT1G02840 Solyc09g075100.3 391 379 570 429 378 430 509 307 330 277 448 305 497 499 607 mitochondrial zinc maintenance protein 1, mitochondrial (AHRD V3.3 *** A0A2I4E752_9ROSI) AT3G62810 Solyc09g075120.3 1839 3415 3002 3225 3678 4117 3894 3222 4354 3881 4107 3981 4147 3420 3777 UDP-glucuronic acid decarboxylase 4 (AHRD V3.3 *** A0A2G2W0G3_CAPBA) AT3G62830 Solyc09g075110.1 1 2 0 0 0 0 0 0 0 1 0 0 0 1 0 Unknown protein Solyc09g075130.3 1892 2278 2360 2127 2332 2678 2472 2229 1706 1569 1918 1955 2715 2519 2120 Small nuclear ribonucleoprotein Sm D2 (AHRD V3.3 *** A0A2I4HQA6_9ROSI) AT3G62840 Solyc09g075140.3 1595 715 1167 575 675 751 688 545 583 893 1131 766 771 740 872 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LF81_ARTAN) AT3G62860 Solyc09g075150.3 1990 3477 4456 4053 4116 4527 4759 3451 1987 2273 3452 2488 4304 3577 3852 60S ribosomal protein L22 (AHRD V3.3 *** A0A1Y1HUA2_KLENI) AT5G27770 Solyc09g075155.1 906 1599 1377 1056 1447 1447 1297 1339 956 847 1029 953 1897 1568 1188 60S ribosomal protein L22 (AHRD V3.3 *** A0A1Y1HUA2_KLENI) AT5G27770 Solyc09g075170.1 148 106 93 157 98 85 93 109 69 129 41 102 153 154 86 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2W0G2_CAPBA) AT3G62890 Solyc09g075180.3 689 2734 1621 2510 3510 2604 2287 5891 2646 3029 1282 3043 1941 2222 1103 DNA photolyase (AHRD V3.3 *** A0A200PWN3_9MAGN) AT2G47590 Solyc09g075190.3 631 1128 1293 1412 1779 1707 1947 1660 972 922 1181 1109 885 1269 845 Gamma-tubulin complex component (AHRD V3.3 *** A0A1U8GAP0_CAPAN),Pfam:PF17681 AT3G53760 Solyc09g075200.4 1877 2383 2541 1959 2388 2433 2284 2472 1877 1938 1915 2247 3010 2254 2338 U2 small nuclear ribonucleoprotein B (AHRD V3.3 *** A0A2U1L5Q9_ARTAN) AT2G47580 Solyc09g075210.3 19665 7059 2599 3983 572 793 531 434 1525 1031 988 1219 3598 5150 8894 Late embryogenesis abundant protein Lea5 (AHRD V3.3 *** A0A1J3JXG8_NOCCA) AT4G02380 Solyc09g075220.1 229 231 267 207 380 321 287 353 241 284 230 204 223 180 185 DUF538 family protein (AHRD V3.3 *** B6SJU2_MAIZE) Solyc09g075230.1 198 418 342 386 656 592 534 503 711 586 417 917 363 412 317 DUF538 family protein (AHRD V3.3 *** B6SJU2_MAIZE) AT1G02816 Solyc09g075270.1 19 7 23 10 7 13 6 6 13 28 12 23 4 9 55 DUF538 family protein (AHRD V3.3 *** B6SJU2_MAIZE) Solyc09g075280.2 917 811 866 860 903 884 974 838 978 810 819 684 715 801 674 Exocyst complex component (AHRD V3.3 *** A0A2G2W0K7_CAPBA) AT4G02350 Solyc09g075290.3 1616 4032 3522 2504 3705 3741 3736 3775 2390 1925 2341 2441 4371 3789 2801 60S ribosomal protein L18 (AHRD V3.3 *** B6SJC8_MAIZE) AT3G05590 Solyc09g075300.3 247 272 229 238 248 257 242 219 168 237 165 126 295 270 312 Epoxide hydrolase 2 (AHRD V3.3 *** B6T857_MAIZE) Solyc09g075320.1 53 84 157 154 102 106 153 112 71 111 130 110 129 83 75 RING-H2 finger protein ATL5-like (AHRD V3.3 *** A0A2I4EZH4_9ROSI) Solyc09g075330.4 7 2 35 6 0 0 0 0 16 8 9 2 0 14 0 Pectinesterase (AHRD V3.3 *** A0A2G2ZVW5_CAPAN) AT1G02810 Solyc09g075350.4 19 382 195 353 603 420 444 661 239 330 160 245 210 280 208 Pectinesterase (AHRD V3.3 *** A0A2G2W0I1_CAPBA) AT4G02320 Solyc09g075360.4 1974 6094 10794 11831 18146 19281 15869 22303 8917 9929 7184 22812 1582 8856 5134 endo-1,4-beta-glucanase precursor AT4G02290 Solyc09g075370.3 440 763 856 864 956 942 915 821 649 641 764 649 912 818 762 Ribosomal protein L46 (AHRD V3.3 *** A0A200QTK4_9MAGN) AT1G14620 Solyc09g075380.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 DNA ligase 1-like isoform X2 (AHRD V3.3 *-* XP_004247534.1) Solyc09g075390.4 1420 1040 1397 1311 755 888 1103 723 1108 885 1216 1027 902 1286 1338 GTP pyrophosphokinase, (P)ppGpp synthetase II Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (AHRD V3.3 *** A0A2D1JZR2_9GAMM) AT4G02260 Solyc09g075400.4 22 24 75 82 22 39 23 27 107 48 115 118 40 66 38 DNA ligase 1-like isoform X2 (AHRD V3.3 *** XP_004247534.1) Solyc09g075410.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pollen Ole e 1 allergen/extensin (AHRD V3.3 *** A0A2U1KBI3_ARTAN) AT2G47540 Solyc09g075420.3 2599 1448 1417 1041 359 398 363 420 1540 3287 2234 1134 1154 837 461 ethylene response factor E.1 Solyc09g075430.3 6584 11567 8589 6037 9593 9036 8541 9577 9040 5785 7735 7516 16084 11609 8742 Ribosomal protein L19 (AHRD V3.3 *** A0A1U8G360_CAPAN) AT1G02780 Solyc09g075440.4 1263 1015 1113 1190 889 947 995 1008 1124 1149 1100 873 821 1029 1338 Never ripe-2 AT2G40940 Solyc09g075450.3 612 1239 1028 895 1003 950 1141 958 1036 670 967 795 1221 1202 741 Fumarate hydratase class II (AHRD V3.3 *** A0A248JQX4_9PROT) AT2G47510 Solyc09g075460.3 1667 2047 2292 2218 2474 2818 3027 2184 1970 2836 3323 2037 1250 1309 2069 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1PV10_ARTAN) AT3G16850 Solyc09g075470.2 38 3 7 7 10 10 7 7 6 3 4 5 11 13 2 DnaJ-like protein subfamily B member 6 (AHRD V3.3 *** A0A2G2W0L3_CAPBA) Solyc09g075480.3 130 759 779 941 1370 1568 1431 1555 880 462 714 859 216 502 662 Kinesin-4 (AHRD V3.3 *** A0A2G2W0J2_CAPBA) AT2G47500 Solyc09g075490.4 1254 1239 984 1299 1305 1445 1588 1203 1003 1158 1231 971 1078 1145 1137 Mitochondrial carrier protein (AHRD V3.3 *** A0A200PWJ1_9MAGN) AT2G47490 Solyc09g075500.3 438 542 413 445 449 460 501 438 391 357 325 518 612 466 393 DUF789 domain-containing protein (AHRD V3.3 *** A0A1Q3AMZ2_CEPFO) Solyc09g075510.4 754 607 986 539 460 639 578 407 441 581 506 393 800 590 635 Protein DEHYDRATION-INDUCED 19 (AHRD V3.3 *** A0A2U1KHD5_ARTAN) Solyc09g075530.3 384 220 210 230 191 195 195 148 187 212 144 199 291 289 251 Syntaxin (AHRD V3.3 *** A0A2G3BWC1_CAPCH) Solyc09g075540.1 0 1 0 0 0 4 2 4 0 1 0 3 0 0 0 COBRA-like protein 8 (AHRD V3.3 *** A0A2G3BWC4_CAPCH) Solyc09g075550.3 127 1231 1128 1831 2443 2612 2501 3026 1538 879 1075 1725 206 804 650 Cellulose synthase (AHRD V3.3 *** A0A1R3H0Z2_COCAP) AT1G02730 Solyc09g075560.1 476 1033 1187 1034 1147 1369 1229 1203 1003 945 1262 1098 705 743 863 Hexosyltransferase (AHRD V3.3 *** A0A2G3BWD5_CAPCH) AT3G62660 Solyc09g075570.1 817 620 780 628 596 589 607 502 517 551 642 515 809 540 710 hypothetical protein (AHRD V3.3 *** AT3G62650.2) AT2G47485 Solyc09g075580.1 136 393 488 1102 170 115 215 154 168 244 330 141 230 163 154 leucine-rich repeat extensin-like protein 3 (AHRD V3.3 *** XP_010326654.1) Solyc09g075590.1 4 53 36 50 86 72 84 101 24 14 16 34 5 8 6 leucine-rich repeat extensin-like protein 1 (AHRD V3.3 *** XP_010326561.1) Solyc09g075600.3 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 GATA transcription factor-like protein (AHRD V3.3 *-* AT1G02700.1) Solyc09g075610.3 55 46 51 45 91 149 89 120 59 47 73 84 37 44 27 GATA transcription factor 15 (AHRD V3.3 *** A0A2G2ZVK4_CAPAN) AT5G26930 Solyc09g075620.3 0 0 0 2 7 1 0 1 1 0 2 0 0 1 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A1P8B4T0_ARATH) Solyc09g075630.1 27 12 47 41 17 20 23 7 12 18 29 14 19 11 101 Unknown protein Solyc09g075640.4 903 656 681 560 506 570 594 417 420 479 514 542 433 534 694 Protein FAR1-RELATED SEQUENCE 11 (AHRD V3.3 *** A0A2G2ZVM3_CAPAN) Solyc09g075650.3 3 26 25 19 13 17 26 21 19 12 44 29 22 25 58 DUF3511 domain protein, putative (DUF3511) (AHRD V3.3 *** O22262_ARATH) AT2G47480 Solyc09g075660.3 8 32 40 23 34 26 37 36 13 11 28 9 12 4 19 cotton fiber protein (AHRD V3.3 --* AT4G02160.1) AT4G02160 Solyc09g075670.1 112 188 68 61 54 67 44 69 35 84 32 24 127 87 151 2-hydroxyisoflavanone dehydratase (AHRD V3.3 *** A0A1U8G399_CAPAN) Solyc09g075680.1 1 33 3 5 53 87 64 134 8 18 2 16 14 5 32 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KK17_ARTAN) Solyc09g075690.1 4 2 0 4 7 5 3 12 3 5 2 11 3 0 23 2-hydroxyisoflavanone dehydratase (AHRD V3.3 *** A0A1U8G399_CAPAN) Solyc09g075700.1 0 0 0 2 0 1 0 0 1 1 2 2 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KC75_ARTAN) Solyc09g075710.1 38 135 70 79 268 241 173 325 140 78 64 220 60 112 20 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KC75_ARTAN) Solyc09g075720.4 84 60 177 77 56 54 59 34 68 42 140 45 68 77 161 Protein kinase superfamily protein (AHRD V3.3 *** Q0WSF6_ARATH) AT2G39110 Solyc09g075730.3 164 189 246 222 229 296 221 225 166 240 253 250 201 235 206 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A0K9NJV0_ZOSMR) AT3G05990 Solyc09g075740.1 12 34 37 34 19 20 12 8 18 16 30 37 14 35 38 hypothetical protein (AHRD V3.3 *** AT3G05980.1) AT3G05980 Solyc09g075750.1 932 1688 895 2099 2764 2997 3300 2759 991 921 1025 1677 410 738 510 membrane-associated kinase regulator (AHRD V3.3 *** AT5G26230.1) AT5G26230 Solyc09g075760.4 1704 1103 1225 1412 1158 1273 1357 1252 1349 1278 1183 1081 1130 1319 1250 cyclinT1_3 Solyc09g075770.3 47 66 103 152 76 119 123 111 96 86 88 139 50 128 134 Long-chain acyl-CoA synthetase 6 (AHRD V3.3 *** A0A2U1MVC5_ARTAN) Solyc09g075780.2 0 3 10 3 4 11 3 0 7 2 0 6 0 1 0 long chain acyl-CoA synthetase 6, peroxisomal-like isoform X1 (AHRD V3.3 *-* XP_025888633.1) Solyc09g075790.3 80 162 230 213 368 603 555 407 209 184 311 316 106 225 145 Long-chain acyl-CoA synthetase (AHRD V3.3 *** U9SHU1_RHIID) Solyc09g075800.4 1151 989 946 1141 1048 1080 1141 1173 1019 1175 884 1005 1029 1082 1104 Chloride channel protein (AHRD V3.3 *** A0A200QQ46_9MAGN) AT5G26240 Solyc09g075810.3 85 141 118 147 149 179 155 129 98 120 114 85 77 105 99 Mavicyanin (AHRD V3.3 *** A0A2G3CT63_CAPCH) AT5G26330 Solyc09g075820.3 1057 507 398 313 11 29 25 17 233 513 731 164 927 916 804 Sugar transporter protein 2 AT5G26340 Solyc09g075830.3 19664 12490 14343 12472 10978 11923 11791 10960 12770 13333 17790 12280 9599 14446 18077 Protein TIME FOR COFFEE (AHRD V3.3 *-* A0A2K3NUY4_TRIPR) AT3G22380 Solyc09g075840.4 4 1 0 0 3 0 0 0 0 1 2 0 0 0 0 Unknown protein Solyc09g075850.3 695 744 1235 1010 1036 1112 947 821 811 906 1068 848 874 915 864 Vacuole membrane protein KMS1 (AHRD V3.3 *** A0A1U8GAY1_CAPAN) AT4G14950 Solyc09g075860.3 830 454 1429 985 406 440 526 279 874 801 1636 721 691 1041 1470 Lipoxygenase (AHRD V3.3 *** K4CVG3_SOLLC) AT3G22400 Solyc09g075870.2 71 65 39 27 22 22 11 26 28 97 43 44 77 57 2 Lipoxygenase (AHRD V3.3 *** K4CVG4_SOLLC) AT3G22400 Solyc09g075880.3 35 19 61 33 0 0 4 2 15 12 43 58 23 59 43 Unknown protein Solyc09g075890.3 1418 192 524 73 31 24 24 18 214 1433 609 441 106 235 262 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1N6A2_ARTAN),Pfam:PF13419 AT2G32150 Solyc09g075900.3 93 296 326 302 314 304 280 244 558 141 349 307 254 370 383 Spermidine synthase (AHRD V3.3 *** F8WLB6_CITUN),Pfam:PF01564 Solyc09g075910.1 424 113 47 59 0 1 0 1 29 76 47 20 57 118 71 Receptor-like protein kinase (AHRD V3.3 *** A0A2U1PPA0_ARTAN) Solyc09g075920.1 362 178 100 55 0 4 0 4 26 93 100 18 82 135 59 Receptor-like protein kinase (AHRD V3.3 *** A0A2U1PPA0_ARTAN) Solyc09g075930.2 11 3 1 7 11 9 2 10 6 6 19 10 5 2 19 Amine oxidase (AHRD V3.3 *** A0A1U8GHQ9_CAPAN) AT4G14940 Solyc09g075940.3 65 6 15 8 19 7 11 13 6 6 9 3 17 13 14 Amine oxidase (AHRD V3.3 *** A0A2G2WW99_CAPBA) AT4G14940 Solyc09g075950.1 151 108 125 130 113 150 117 143 139 106 90 164 95 87 92 Heat shock protein 70 kDa (AHRD V3.3 *** A0A2K3P5L8_TRIPR) AT2G32120 Solyc09g075960.1 49 96 130 137 206 217 166 151 140 89 109 107 95 132 91 DUF868 domain-containing protein (AHRD V3.3 *** A0A1Q3CLP0_CEPFO) AT5G28150 Solyc09g075965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) ATMG00240 Solyc09g075970.3 65 440 589 886 1563 1369 1284 1417 430 240 479 877 356 648 449 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** F4I8Q8_ARATH) AT1G05370 Solyc09g075973.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g075977.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc09g075980.3 8 13 24 10 0 3 11 0 4 7 6 6 13 14 32 BnaA05g17230D protein (AHRD V3.3 *** A0A078FCG1_BRANA) Solyc09g075990.3 325 292 362 402 368 326 362 306 307 319 466 328 269 231 656 5'-nucleotidase surE-like protein (AHRD V3.3 *** A0A2K3MS27_TRIPR) Solyc09g076000.3 1379 1319 1712 1995 1662 1807 1738 1351 1795 1297 2060 1590 1341 1689 2623 MAP kinase kinase kinase 71 Solyc09g076010.3 674 748 778 624 705 893 838 855 816 657 956 642 671 785 807 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (AHRD V3.3 *** A0A1P8B7I1_ARATH) AT4G14920 Solyc09g076020.3 294 480 414 475 417 412 445 452 543 321 326 370 569 570 431 Imidazoleglycerol-phosphate dehydratase (AHRD V3.3 *** A0A2G3CT70_CAPCH) AT3G22425 Solyc09g076030.4 135 145 282 140 102 148 123 140 217 165 368 147 133 174 192 Photosystem II D1 processing protein PSB27-H2, chloroplastic (AHRD V3.3 *** A0A2G2ZVE7_CAPAN) AT1G05385 Solyc09g076040.3 31443 13136 6185 11798 6255 6170 5988 10216 7397 15164 9281 11987 6950 8447 7164 XS domain (AHRD V3.3 *** A0A200Q4P1_9MAGN) AT3G22430 Solyc09g076050.4 98599 60902 69063 73136 61045 66098 60842 60861 48532 77870 71438 73930 46638 60122 51059 FRIGIDA-like protein (AHRD V3.3 *** A0A2G2W0C1_CAPBA) AT3G22440 Solyc09g076053.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g076057.1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 2 Unknown protein Solyc09g082050.4 503 505 456 471 506 499 475 468 604 525 416 545 509 541 446 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 (AHRD V3.3 *** A0A2G2W0D8_CAPBA) AT5G04940 Solyc09g082060.3 2073 2192 2593 2454 1698 1637 1650 1698 2139 2141 1674 1704 3308 2830 2620 Cysteine synthase (AHRD V3.3 *** A0A1U8GCP9_CAPAN) AT4G14880 Solyc09g082080.1 111 220 195 410 810 807 743 831 274 244 322 375 742 473 220 ovate family protein 19 AT1G05420 Solyc09g082090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UPF0725 protein (AHRD V3.3 *-* XP_004235347.1) Solyc09g082100.3 22 7 0 4 5 0 0 0 0 25 7 1 2 13 47 Late embryogenesis abundant protein D-34 (AHRD V3.3 *** A0A2G3CT36_CAPCH) Solyc09g082110.4 3 6 0 8 5 17 5 10 4 18 5 2 5 5 1 Late embryogenesis abundant protein D-34 (AHRD V3.3 *** A0A2G2ZVC9_CAPAN) AT3G22490 Solyc09g082115.1 1196 702 563 588 465 550 396 491 706 896 637 686 1211 720 575 Lactoylglutathione lyase / glyoxalase I family protein (AHRD V3.3 *** A0A2U1MRE2_ARTAN) AT2G32090 Solyc09g082130.4 1807 1650 1602 1407 1935 1734 1714 2239 1650 2016 1306 1966 1590 1390 1034 spindle assembly abnormal protein (AHRD V3.3 *** AT4G14840.3) AT3G22520 Solyc09g082140.4 546 419 572 425 517 583 476 442 380 477 491 439 480 459 516 Protein OBERON 1 (AHRD V3.3 *** A0A2I0V764_9ASPA) AT1G05410 Solyc09g082150.1 16 34 36 28 43 38 37 41 40 19 11 33 14 28 32 Heat shock protein (AHRD V3.3 *** Q8VY73_ARATH) Solyc09g082160.4 379 300 364 314 363 347 305 306 361 322 350 360 383 364 360 hypothetical protein (AHRD V3.3 *** AT1G05430.1) AT1G05430 Solyc09g082170.4 44 141 90 106 120 84 92 133 98 78 45 101 127 97 50 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2W250_CAPBA) AT4G14820 Solyc09g082180.3 46 219 125 194 441 475 394 653 210 182 190 321 23 125 68 C-8 sterol isomerase (AHRD V3.3 *** AT1G05440.1) AT1G05440 Solyc09g082190.1 10 60 4 25 119 73 60 82 28 11 5 7 17 16 45 DUF1677 domain-containing protein (AHRD V3.3 *** A0A1Q3CNW8_CEPFO) AT3G22540 Solyc09g082200.2 549 627 514 674 661 682 767 696 544 576 640 667 582 551 717 Folate-biopterin transporter 1, chloroplastic (AHRD V3.3 *** A0A2G3CSY8_CAPCH) AT2G32040 Solyc09g082210.4 1664 1750 1720 1861 3547 3009 2941 3369 1616 2039 1491 1779 2217 1733 1724 DUF581 domain-containing protein (AHRD V3.3 *** A0A1Q3DCU3_CEPFO) AT3G22550 Solyc09g082220.1 73 19 19 14 12 15 4 11 15 32 55 11 68 29 36 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** Q9LJ90_ARATH) Solyc09g082230.1 213 68 105 47 0 4 0 1 24 84 199 28 152 95 98 N-acetyltransferase (AHRD V3.3 *** A0A2N9Z4V7_PAEPO) AT2G32030 Solyc09g082240.4 65 16 38 23 18 3 2 0 6 20 5 3 88 35 44 N-acetyltransferase (AHRD V3.3 *-* A0A2N9Z4V7_PAEPO) Solyc09g082250.3 14 1 3 4 0 0 0 0 0 1 1 6 2 10 0 N-acetyltransferase (AHRD V3.3 *** A0A2N9Z4V7_PAEPO) Solyc09g082260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 N-acetyltransferase (AHRD V3.3 *** A0A2N9Z8D1_PAEPO) Solyc09g082270.4 5 18 6 9 7 4 6 8 76 14 22 6 14 20 1 Lipid transfer protein (AHRD V3.3 *** G7K520_MEDTR) Solyc09g082280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lipid transfer protein (AHRD V3.3 *** K7WVB3_SOLTU) Solyc09g082290.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *-* A0A2U1NA97_ARTAN) AT3G22620 Solyc09g082300.3 6 0 1 7 2 3 3 1 5 4 12 0 7 4 4 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *-* A0A2U1Q1B8_ARTAN) AT1G05450 Solyc09g082310.2 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein (AHRD V3.3 *-* A0A103YLJ9_CYNCS) AT4G14805 Solyc09g082320.3 1561 2585 3048 2535 3514 3510 3385 3207 2461 2278 2598 2762 3348 2989 2643 Proteasome subunit beta (AHRD V3.3 *** A0A1Q3DBP1_CEPFO) AT3G22630 Solyc09g082330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vicilin-like storage protein (AHRD V3.3 *** Q40873_PICGL) AT3G22640 Solyc09g082340.2 222 40 20 6 0 4 0 2 3 0 12 1 14 86 198 vicilin AT3G22640 Solyc09g082360.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vicilin-like protein antimicrobial peptides 2-1-like protein (AHRD V3.3 *-* A0A2K3L0Z1_TRIPR) Solyc09g082370.4 592 1299 1353 1363 1514 1716 1575 1408 1510 953 1044 1167 1140 1477 861 Type I inositol polyphosphate 5-phosphatase 5 (AHRD V3.3 *-* A0A199V5W7_ANACO) AT1G05470 Solyc09g082380.4 370 337 447 414 335 397 449 273 309 306 488 374 422 359 439 ATP-dependent RNA helicase SUV3, mitochondrial (AHRD V3.3 *** A0A2G2W126_CAPBA) AT4G14790 Solyc09g082390.3 134 187 165 114 173 187 185 220 181 154 127 166 143 159 163 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RCQ9_9MAGN) AT3G22670 Solyc09g150156.1 29 24 36 36 18 25 30 20 20 17 57 26 52 29 40 Unknown protein Solyc09g082400.2 68 38 24 62 30 39 34 43 44 34 26 47 32 39 51 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A8J1_CAPAN) AT1G71490 Solyc09g082420.1 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 protein RDM1-like (AHRD V3.3 *-* A0A1U7VRZ0_NICSY) Solyc09g082430.1 3 0 3 0 0 0 0 0 1 1 0 0 2 0 0 protein RDM1-like (AHRD V3.3 *** A0A1U7VRZ0_NICSY) Solyc09g082440.1 3 0 0 3 0 0 2 1 0 1 0 0 0 0 12 protein RDM1-like (AHRD V3.3 *-* A0A1U7VRZ0_NICSY) Solyc09g082450.1 59 55 34 53 32 32 17 31 34 12 21 31 80 70 57 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CSX3_CAPCH) AT3G22690 Solyc09g082460.3 7 2 5 5 1 1 7 0 1 1 6 8 8 5 8 Homocysteine S-methyltransferase (AHRD V3.3 *** A0A200QYH8_9MAGN) AT3G22740 Solyc09g082470.4 237 263 316 316 318 290 310 298 334 251 190 222 389 311 301 Protein kinase family protein (AHRD V3.3 *** X5I191_IPONI) AT3G22750 Solyc09g082480.2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 protein RDM1 (AHRD V3.3 *** A0A2G2XXG5_CAPAN) AT3G22680 Solyc09g082490.4 582 715 828 949 945 1112 1092 962 734 801 707 982 644 685 592 protein XRI1 (AHRD V3.3 *** A0A2I4G9Z5_9ROSI) AT5G48720 Solyc09g082500.4 2917 4810 4744 7073 6461 6897 7565 6472 3768 4200 4830 5894 2518 3618 2097 Tesmin/TSO1-like CXC domain-containing protein (AHRD V3.3 *** A0A2U1PDE1_ARTAN) AT4G14770 Solyc09g082510.3 4857 7020 7433 5694 8658 9472 8759 9516 12115 6644 9507 8281 6026 7099 6336 Kinase interacting (KIP1-like) family protein (AHRD V3.3 *** A0A2K3NUK8_TRIPR) AT3G22790 Solyc09g082520.3 2622 2800 2668 2012 1975 2279 2213 1972 2047 1580 1980 1755 3003 2573 2668 40S ribosomal protein S3a (AHRD V3.3 *-* A0A2G2W0A0_CAPBA) AT4G34670 Solyc09g082530.3 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A103YIU1_CYNCS) Solyc09g082540.3 1175 1197 935 832 863 888 859 957 896 738 894 866 1259 1186 993 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** Q8RXN1_ARATH) AT1G04190 Solyc09g082550.3 152 271 22 65 148 80 94 143 112 111 2 59 173 65 16 Sulfate transporter (AHRD V3.3 *** Q70BL1_BRAOL) Solyc09g082560.4 452 641 802 888 717 692 561 805 1196 716 1324 626 784 613 664 SUN-like protein 26 AT4G14750 Solyc09g082570.3 82 146 94 107 68 63 63 48 57 56 119 66 66 106 149 Neurogenic locus notch-like protein (AHRD V3.3 *** F4JIF2_ARATH) AT4G14746 Solyc09g082580.4 977 802 649 697 520 426 436 535 940 775 609 636 831 886 722 Auxin canalization protein (DUF828) (AHRD V3.3 *** Q8VY20_ARATH) AT3G22810 Solyc09g082590.4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Bax inhibitor-1 family protein (AHRD V3.3 *** A0A2U1MW73_ARTAN) Solyc09g082600.3 0 3 7 8 31 41 25 32 2 0 13 9 7 3 2 Chlorophyllase-2, chloroplastic (AHRD V3.3 *** A0A1U8FCR3_CAPAN) AT5G43860 Solyc09g082610.1 0 1 0 2 3 4 0 4 2 0 0 0 2 2 0 Plant invertase/pectin methylesterase inhibitor (AHRD V3.3 *** G7JP00_MEDTR) AT3G49330 Solyc09g082620.3 344 561 257 675 849 883 977 860 535 423 378 661 575 428 327 EPIDERMAL PATTERNING FACTOR-like protein 6 (AHRD V3.3 *** A0A2G2ZV72_CAPAN) AT4G14723 Solyc09g082630.3 818 982 445 673 1217 1175 1167 1012 903 579 452 755 1001 534 439 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (AHRD V3.3 *** A0A2G2ZV75_CAPAN) AT5G43850 Solyc09g082640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (AHRD V3.3 *** A0A2G2ZV57_CAPAN) Solyc09g082650.4 4538 4733 5388 6057 5184 5334 5292 4690 12330 6300 10342 8953 5855 6206 6267 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (AHRD V3.3 *** A8UGP3_SOLTU) AT4G14710 Solyc09g082660.3 162 605 441 157 219 233 328 228 781 279 227 717 1457 875 1361 Caffeoyl-CoA O-methyltransferase (AHRD V3.3 *** Q2YHM9_PLAMJ) AT1G67980 Solyc09g082670.3 1 1 2 3 0 0 0 0 5 0 1 0 0 2 0 Heat shock transcription factor (AHRD V3.3 *-* A0A1Y1I763_KLENI) Solyc09g082680.3 1069 647 733 794 718 665 665 697 678 829 646 703 698 684 776 Dymeclin (AHRD V3.3 *** A0A2U1PDG2_ARTAN),Pfam:PF09742 AT1G04200 Solyc09g082690.3 2715 2743 163 515 1182 910 1097 1338 1451 972 194 1802 973 661 584 superoxide dismutase AT3G22840 Solyc09g082700.2 0 0 11 7 1 0 0 0 18 6 51 30 5 1 4 Early light-induced protein, chloroplastic (AHRD V3.3 *** A0A2G2W0Z1_CAPBA) AT3G22840 Solyc09g082710.3 647 1722 1314 1240 1614 1622 1580 1726 821 959 1277 1574 1062 1261 643 Histone H2A (AHRD V3.3 *** A0A1U8G3K0_CAPAN) AT1G54690 Solyc09g082720.3 182 363 430 363 350 363 368 440 513 302 431 449 355 462 386 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) Solyc09g082730.5 669 557 424 698 375 226 262 306 704 616 545 397 849 679 872 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) Solyc09g082740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mediator of RNA polymerase II transcription subunit-like protein (AHRD V3.3 --* AT1G11760.1) Solyc09g082750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 32 (AHRD V3.3 *-* A0A2G2XL50_CAPBA) Solyc09g082760.3 602 592 1206 1574 20 59 29 14 466 450 289 114 343 360 333 Aspartic proteinase A1 (AHRD V3.3 *** A0A2G3CJM2_CAPCH) Solyc09g082770.3 519 669 777 680 798 792 603 827 792 689 728 759 999 682 579 Transmembrane emp24 domain-containing protein p24beta3 (AHRD V3.3 *** A0A2G3C534_CAPCH) AT3G22845 Solyc09g082780.3 1350 1391 2454 2273 3474 3202 3217 3310 3078 2877 2773 3059 1938 2410 2255 Aluminum induced protein with YGL and LRDR motifs (AHRD V3.3 *** Q9LIL3_ARATH) AT3G22850 Solyc09g082790.4 48 79 100 90 121 113 94 124 104 44 50 141 86 185 71 DNA repair (Rad51) family protein (AHRD V3.3 *** A0A1I9LT97_ARATH) AT3G22880 Solyc09g082800.3 1557 2055 1841 1687 1709 1922 2071 1729 1560 1317 1519 1545 1800 1922 1575 Pkinase domain-containing protein/LRR_4 domain-containing protein/LRR_7 domain-containing protein/EDR1 domain-containing protein (AHRD V3.3 *** A0A1Q3APC1_CEPFO) AT1G04210 Solyc09g082820.3 5 1 1 7 0 0 0 0 0 1 0 1 0 3 11 Unknown protein Solyc09g082830.4 6490 6917 7921 6368 11498 10950 11398 11506 6573 6122 7242 8168 5194 6899 5035 Argonaute 10a AT5G43810 Solyc09g082840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g082845.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g082850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g082855.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Unknown protein Solyc09g082860.3 2449 1428 1169 900 1018 803 799 1028 1101 1472 882 1185 1107 1149 812 ATP sulfurylase (AHRD V3.3 *** Q8SAG1_SOYBN) AT3G22890 Solyc09g082870.3 1437 639 2745 376 60 60 82 74 325 1127 4387 322 1372 670 487 Calcium-transporting ATPase (AHRD V3.3 *** A0A2G2W115_CAPBA) Solyc09g082890.2 15 11 7 1 0 0 0 1 13 22 22 0 11 12 0 Calcium-transporting ATPase (AHRD V3.3 *-* A0A2G2Z807_CAPAN) Solyc09g082900.3 0 8 7 7 3 8 0 3 4 1 22 0 9 6 18 dentin sialophosphoprotein isoform X1 (AHRD V3.3 *-* XP_021606199.1) AT4G14650 Solyc09g098610.2 1 6 0 5 11 2 6 7 5 3 0 4 12 4 9 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A2G3CSN3_CAPCH) AT2G45550 Solyc09g082910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc09g082920.1 38 18 17 26 10 20 9 12 6 11 26 6 30 13 56 Unknown protein Solyc09g082930.1 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 Unknown protein Solyc09g082940.3 85 101 158 136 121 107 141 139 126 91 87 119 134 114 87 Guanine nucleotide-binding protein subunit gamma 1 (AHRD V3.3 *** A0A2G2ZUY0_CAPAN) AT3G22942 Solyc09g082950.2 4742 3744 3168 4336 5522 3411 3259 4392 3770 6805 3558 4906 4523 3856 2624 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* B4FGP1_MAIZE) AT1G07310 Solyc09g082960.1 4 1 0 1 0 3 0 2 1 1 0 0 0 3 0 serine/arginine repetitive matrix protein 1-like (AHRD V3.3 *** XP_004231371.1) Solyc09g082970.3 9350 6750 6043 6201 4681 4746 4556 4821 5604 6770 5388 5928 4353 4871 6852 Pyruvate kinase (AHRD V3.3 *** A0A2G2W137_CAPBA) AT3G22960 Solyc09g082980.3 1988 1916 1340 2043 3921 4019 3973 2912 1953 2282 1885 2359 1765 1762 2348 DUF506 domain-containing protein (AHRD V3.3 *** A0A1Q3BNU4_CEPFO) AT3G22970 Solyc09g082990.3 6497 6812 5437 6672 8096 8412 8506 7150 4772 5127 4228 4838 7493 6332 6301 GDP-mannose-3',5'-epimerase (AHRD V3.3 *** A5JPK5_VITVI) AT5G28840 Solyc09g083000.3 1331 1022 1147 1058 1109 1080 1158 1049 1093 1261 1362 1126 1120 1181 1188 Armadillo repeat-containing protein LFR (AHRD V3.3 *** A0A2G2W133_CAPBA) AT3G22990 Solyc09g083003.1 476 318 351 390 213 254 285 166 243 236 345 213 325 399 740 Endonuclease III homolog (AHRD V3.3 *** A0A2G2ZUX5_CAPAN) Solyc09g083007.1 88 57 83 76 17 21 36 31 57 71 45 61 65 70 102 Endonuclease III homolog (AHRD V3.3 *** A0A2G2W158_CAPBA) Solyc09g083020.1 2061 1352 1568 1712 730 835 883 622 1305 1672 1705 1144 2166 1816 2316 inactive protein RESTRICTED TEV MOVEMENT 1-like (AHRD V3.3 *** A0A1S3ZEZ8_TOBAC) AT1G05760 Solyc09g083030.1 200 200 360 310 141 215 218 154 162 168 232 179 246 241 307 inactive protein RESTRICTED TEV MOVEMENT 1-like (AHRD V3.3 *** A0A1S3ZEZ8_TOBAC) AT1G05760 Solyc09g083040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 inactive protein RESTRICTED TEV MOVEMENT 1-like (AHRD V3.3 *** A0A1S3ZEZ8_TOBAC) AT1G05760 Solyc09g083050.3 529 561 545 465 177 215 184 184 428 387 605 328 495 557 771 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G3CSP6_CAPCH) AT5G43760 Solyc09g083060.4 1309 826 1043 652 68 79 106 68 506 851 1038 146 1671 1094 815 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G2W155_CAPBA) Solyc09g083070.3 274 354 320 365 362 510 430 390 339 260 348 329 344 360 260 sporulation-specific protein (AHRD V3.3 *** AT1G52825.2) AT4G14615 Solyc09g083080.4 5544 8379 7251 4361 5249 5037 4985 5267 5020 3080 6173 4962 10665 8816 8264 Nucleolar protein 58 (AHRD V3.3 *** A0A1U8GRC5_CAPAN) AT3G05060 Solyc09g083090.4 90 114 59 48 235 200 185 209 63 132 35 67 61 56 37 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2W162_CAPBA) AT3G23000 Solyc09g083100.1 658 470 404 304 515 501 521 588 320 575 350 410 440 307 312 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2W162_CAPBA) AT3G23000 Solyc09g150157.1 22 9 60 21 32 21 22 23 24 9 32 9 17 16 52 Acylamino-acid-releasing enzyme (AHRD V3.3 *-* B6U4F7_MAIZE) Solyc09g083110.3 97 104 94 115 90 110 131 133 132 103 47 129 122 145 135 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8G627_CAPAN) AT3G23020 Solyc09g083120.3 24 86 29 81 64 44 59 59 107 59 116 60 50 40 87 Acylamino-acid-releasing enzyme (AHRD V3.3 *** A0A1J3FLE9_NOCCA) AT4G14570 Solyc09g083130.3 758 626 849 980 1217 1389 1725 1239 1457 1033 1607 1312 426 702 2010 Acylamino-acid-releasing enzyme (AHRD V3.3 *** A0A1J3E2A0_NOCCA) AT4G14570 Solyc09g083135.1 57 43 33 9 16 19 19 32 29 21 11 21 14 32 36 Unknown protein Solyc09g083150.4 589 418 414 373 398 295 324 425 375 590 524 462 321 423 502 NADH dehydrogenase-like complex N (AHRD V3.3 *** A0A0F7H005_9ROSI) AT5G58260 Solyc09g083160.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g083163.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g083165.1 0 0 2 0 0 0 0 0 0 0 0 0 0 2 3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc09g083167.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g083170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g083180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g083190.3 66 119 249 254 238 276 241 207 229 156 504 148 117 159 388 NAD(P)H dehydrogenase 18 (AHRD V3.3 *** A0A0F7CYQ9_9ROSI) AT5G43750 Solyc09g083200.4 3729 1150 587 619 8 4 14 6 268 1056 256 67 3414 2465 680 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1MF72_ARTAN) Solyc09g083210.3 6259 3116 1980 1649 572 457 389 719 1889 4383 1706 1286 4731 2012 1305 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1MF72_ARTAN) Solyc09g083220.3 10124 4902 4798 5904 4900 4970 5222 4860 3136 5933 5985 5136 4178 4496 5273 bHLH transcription factor 060 Solyc09g083230.1 207 106 136 131 81 85 128 92 112 164 145 103 121 84 112 F-box associated interaction domain-containing protein (AHRD V3.3 *** A0A2U1PT01_ARTAN) AT3G23880 Solyc09g083260.4 196 336 458 549 365 351 462 328 420 257 460 290 365 452 598 Ion channel pollux-like protein (AHRD V3.3 *** A0A2K3NXN4_TRIPR) AT5G43745 Solyc09g083270.4 614 705 612 509 701 595 575 654 539 489 449 610 813 655 495 rRNA-processing EFG1-like protein (DUF2361) (AHRD V3.3 *** A0A1P8ANS3_ARATH) AT5G43720 Solyc09g083280.3 433 820 531 619 562 392 368 466 1027 581 539 468 680 616 611 auxin-regulated IAA1 AT1G04240 Solyc09g083290.3 176 448 104 290 128 102 125 76 401 389 216 73 254 119 456 auxin-regulated IAA14 AT4G14550 Solyc09g083300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *-* A0A2G2X5V3_CAPBA) Solyc09g083305.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin protein ligase DRIP2-like (AHRD V3.3 *-* A0A2I4F6S7_9ROSI) Solyc09g083310.3 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *-* A0A2G2X5V3_CAPBA) Solyc09g083320.1 432 938 803 740 809 697 717 852 715 652 642 853 1158 741 472 PRA1 family protein (AHRD V3.3 *** A0A2G2W0T9_CAPBA) AT1G04260 Solyc09g083330.3 499 259 218 328 217 291 270 236 307 339 273 228 282 233 222 Phosphatidate cytidylyltransferase (AHRD V3.3 *** A0A1U8G5A6_CAPAN),Pfam:PF01148 AT4G22340 Solyc09g083340.3 64 34 78 28 39 48 54 41 32 38 40 27 13 40 26 DNA-directed RNA polymerase ii subunit rpb7-like protein (AHRD V3.3 *** A0A2K3MTA8_TRIPR) Solyc09g083350.3 564 644 582 631 583 611 625 554 851 558 392 639 597 776 545 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A1J3FEK9_NOCCA) AT3G23070 Solyc09g083360.3 23 117 476 21 34 46 15 41 47 164 136 52 38 33 15 Transcription factor bHLH92 (AHRD V3.3 *** A0A2G2ZV24_CAPAN) AT5G43650 Solyc09g083370.3 780 1351 1170 999 1248 1383 1482 1088 640 646 967 860 1195 1371 1127 40S ribosomal protein S15 (AHRD V3.3 *** A0A2G2Z9S5_CAPAN) AT5G09510 Solyc09g083380.4 1881 15940 11498 11559 19495 16347 16022 22289 11315 9229 10341 17517 4691 11315 4725 Histone H1 (AHRD V3.3 *-* A0A2G3CST5_CAPCH) Solyc09g083390.3 1716 1224 64 511 862 726 761 983 495 609 102 347 539 286 278 zinc knuckle (CCHC-type) family protein (AHRD V3.3 *-* AT5G43630.4) AT5G43630 Solyc09g083400.3 279 553 527 450 882 812 853 925 759 683 596 675 592 462 568 Protein WVD2-like 1 (AHRD V3.3 *** A0A1U8G599_CAPAN) AT3G23090 Solyc09g083410.4 619 873 1184 1181 1352 1272 1213 1313 1549 898 1110 1322 909 1202 1190 N-carbamoyl-L-amino-acid hydrolase (AHRD V3.3 *** A0A1U6JVN3_9BACI) AT5G43600 Solyc09g083420.3 2273 1390 1404 1001 893 1002 914 931 1268 1001 1556 1068 1116 1272 1727 CWF19-like protein 2 (AHRD V3.3 *** A0A1J3GT59_NOCCA) AT1G56290 Solyc09g083430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Proteinase inhibitor 1 PPI3B2 (AHRD V3.3 *** Q4FE26_SOLTU) AT2G38870 Solyc09g083435.1 163 188 236 341 356 310 336 292 3329 516 994 810 40 345 178 Proteinase inhibitor 1 PPI3A2 (AHRD V3.3 *** Q4FE23_SOLTU) AT2G38870 Solyc09g084440.2 118 159 498 212 377 365 401 242 563 488 1369 336 57 92 435 Proteinase inhibitor 1 PPI3A2 (AHRD V3.3 *** Q4FE23_SOLTU) AT2G38870 Solyc09g084450.3 17 119 244 254 595 305 347 226 2527 960 3385 2957 102 369 420 Protease inhibitor I (AHRD V3.3 *** Q07459_SOLTU) AT2G38870 Solyc09g084460.3 5 141 332 69 244 147 127 105 318 485 701 586 131 265 390 Protease inhibitor I (AHRD V3.3 *** Q07459_SOLTU) AT2G38870 Solyc09g084470.3 1160 383 1782 1297 1927 2121 1515 1493 4910 2471 2895 3732 285 905 728 Proteinase inhibitor 1 PPI3B2 (AHRD V3.3 *** Q4FE26_SOLTU) AT2G38870 Solyc09g084480.3 742 704 934 1008 3591 3587 3085 3060 3962 1778 3309 4670 544 1164 396 Protease inhibitor I (AHRD V3.3 *** Q07459_SOLTU) AT2G38870 Solyc09g084490.4 76 40 45 160 101 99 70 61 627 209 625 805 4 155 41 Proteinase inhibitor 1 PPI3B2 (AHRD V3.3 *** Q4FE26_SOLTU) AT2G38870 Solyc09g089490.4 1 5 4 5 1 2 4 0 182 6 24 17 0 2 0 Proteinase inhibitor (AHRD V3.3 *** Q93X99_IPOBA) AT2G38870 Solyc09g089500.3 0 6 0 1 15 17 13 28 169 5 3 56 0 3 0 Proteinase inhibitor 1 PPI3B2 (AHRD V3.3 *** Q4FE26_SOLTU) AT2G38870 Solyc09g089520.4 0 4 0 5 0 1 0 0 21 6 0 0 0 0 0 Proteinase inhibitor (AHRD V3.3 *** A0A1J3I3T7_NOCCA) AT2G38870 Solyc09g089530.3 256 315 433 715 1070 1021 846 981 2809 453 1026 1601 57 471 174 Proteinase inhibitor 1 PPI3A2 (AHRD V3.3 *** Q4FE23_SOLTU) AT2G38870 Solyc09g089540.4 0 10 0 6 0 0 1 0 14 0 13 9 0 1 4 Proteinase inhibitor (AHRD V3.3 *** Q93X99_IPOBA) AT2G38870 Solyc09g089550.4 1206 541 484 477 258 346 324 269 384 542 555 295 389 478 787 Zinc-finger homeodomain protein 1 (AHRD V3.3 *-* A0A2G2W0R2_CAPBA) Solyc09g089560.4 2026 911 968 1060 727 981 983 689 990 1237 1345 899 703 942 1397 MATH domain-containing protein (AHRD V3.3 *-* A0A1Q3BTU7_CEPFO) AT1G04300 Solyc09g089570.4 0 7 0 0 6 1 0 0 0 0 1 0 5 1 1 Agenet domain protein (AHRD V3.3 *-* G7JN46_MEDTR) Solyc09g089573.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cellulose synthase (AHRD V3.3 *-* A0A200Q4F9_9MAGN) Solyc09g089577.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cellulose synthase (AHRD V3.3 *** A0A200Q4F9_9MAGN) Solyc09g089580.4 2376 630 851 851 267 138 141 101 440 486 396 394 958 838 1417 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QA13_ARTAN) AT1G04350 Solyc09g089585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** R9WWA4_SOLLC) Solyc09g089590.1 25 50 34 19 3 20 25 7 5 33 12 20 0 27 1 Transcriptional regulator TAC1 (AHRD V3.3 *** A0A2G2VTP3_CAPBA) AT3G23130 Solyc09g089600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 *** A0A200PXY8_9MAGN) AT3G09290 Solyc09g089610.3 158 118 115 133 127 100 96 113 72 160 112 114 81 106 120 ethylene receptor-like protein (ETR6) Solyc09g089620.1 39 20 17 50 0 0 0 3 2 2 2 3 19 20 29 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2G3BF72_CAPCH) AT4G14465 Solyc09g089630.3 44 64 70 94 84 70 77 77 80 74 92 48 76 58 88 Bet1-like SNARE 1-2 (AHRD V3.3 *** A0A2G2ZUX3_CAPAN) AT4G14455 Solyc09g089640.2 84 156 164 157 192 189 187 184 210 140 176 136 213 142 77 Plant/protein (DUF668) (AHRD V3.3 *** Q9LTD4_ARATH) AT3G23160 Solyc09g089650.1 187 113 171 107 58 73 93 87 108 152 187 83 158 85 214 hypothetical protein (AHRD V3.3 *** AT1G04330.1) AT1G04330 Solyc09g089660.4 552 473 361 456 547 483 491 580 509 496 469 482 511 507 407 Actin-related protein 9 (AHRD V3.3 *** A0A2G2ZUV2_CAPAN) AT5G43500 Solyc09g089670.3 934 2735 1760 2070 2615 2624 2497 2343 1554 1431 1623 1840 2873 2182 1810 HR-like lesion-inducing protein-related (AHRD V3.3 *** B6SJ11_MAIZE) AT4G14420 Solyc09g089680.4 14 12 1 9 0 0 0 2 2 9 7 0 4 17 33 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QA13_ARTAN) AT1G04350 Solyc09g089690.3 573 820 845 711 530 510 556 485 972 550 928 520 524 644 787 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) AT1G04350 Solyc09g089700.3 7 6 5 7 2 4 11 0 9 7 7 6 23 25 25 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NJZ4_ARTAN) Solyc09g089710.3 42 30 6 5 0 0 4 1 10 6 10 14 43 30 8 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1NTU8_ARTAN) Solyc09g089720.3 61 46 35 22 0 4 1 3 14 5 10 10 20 35 56 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) Solyc09g089730.3 181 103 16 245 0 0 0 0 56 20 15 0 55 24 83 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) AT1G04350 Solyc09g089740.3 17 6 2 35 0 0 0 0 4 3 5 0 1 1 29 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) Solyc09g089750.1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 9 1-aminocyclopropane-1-carboxylate oxidase-like protein 1 (AHRD V3.3 *-* A0A2G2W184_CAPBA) Solyc09g089760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) AT1G04350 Solyc09g089770.3 0 0 0 1 0 0 1 3 0 1 5 0 0 0 8 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A1P8AM08_ARATH) Solyc09g089780.3 0 1 0 0 0 0 1 0 0 5 0 0 2 0 7 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** O80851_ARATH) Solyc09g089790.3 2 1 0 0 5 6 1 0 1 0 6 0 7 2 4 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** O80850_ARATH) Solyc09g089800.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1M6C8_ARTAN) Solyc09g089810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NTU8_ARTAN) Solyc09g089820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** O80851_ARATH) Solyc09g089830.4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** O80850_ARATH) Solyc09g089840.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A1P8BH67_ARATH) Solyc09g089850.3 126 144 121 121 132 160 138 122 87 117 146 161 126 117 133 CASP-like protein (AHRD V3.3 *** A0A2I4GE76_9ROSI) AT3G23200 Solyc09g089860.4 17 34 67 80 7 3 14 7 41 19 68 35 28 60 159 WAT1-related protein (AHRD V3.3 *** K4CW12_SOLLC) Solyc09g089870.3 367 399 248 297 343 369 446 304 391 391 354 283 364 313 455 bHLH transcription factor 061 AT4G14410 Solyc09g089880.3 605 438 414 417 416 388 384 376 540 526 492 433 689 540 499 Electron transfer flavoprotein beta-subunit (AHRD V3.3 *** B6TPR6_MAIZE) AT5G43430 Solyc09g089890.1 40 52 45 52 87 73 57 54 47 45 64 45 80 44 42 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1Q188_ARTAN) AT1G04360 Solyc09g089910.1 14 14 2 0 0 0 0 0 0 3 0 3 9 3 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A1U8GJ51_CAPAN) AT5G43410 Solyc09g089920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2W1A3_CAPBA) AT3G23230 Solyc09g089930.3 103 86 20 21 2 1 0 0 4 26 42 7 22 51 40 ethylene responsive factor E.2 AT3G23240 Solyc09g089940.1 1172 818 1096 575 674 671 540 752 792 839 708 718 956 944 642 DUF2828 domain-containing protein (AHRD V3.3 *** A0A1Q3B0Q4_CEPFO) AT5G43400 Solyc09g089950.1 0 0 0 0 10 3 4 7 0 0 0 0 2 4 0 Unknown protein Solyc09g089960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 lysine-rich arabinogalactan protein 19-like (AHRD V3.3 *** XP_010326880.1) Solyc09g089970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 lysine-rich arabinogalactan protein 19-like (AHRD V3.3 *** XP_010326880.1) Solyc09g089975.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 acanthoscurrin-2-like (AHRD V3.3 *-* XP_019071131.1) Solyc09g089990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 Germin-like protein subfamily 1 member 20 (AHRD V3.3 *** A0A2G3CSE3_CAPCH) Solyc09g090000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Germin-like protein subfamily 1 member 20 (AHRD V3.3 *** A0A2G2W1A8_CAPBA) Solyc09g090005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Germin-like protein subfamily 1 member 20 (AHRD V3.3 *** A0A2G3CSH1_CAPCH) Solyc09g090020.4 508 424 608 469 210 343 326 189 250 314 550 357 397 440 738 Germin-like protein subfamily 1 member 20 (AHRD V3.3 *** A0A2G2W1A8_CAPBA) Solyc09g090030.2 272 367 241 201 153 227 206 261 201 151 135 226 319 377 186 Histone-lysine N-methyltransferase ASHR2 (AHRD V3.3 *** A0A2G3CSJ0_CAPCH) AT2G19640 Solyc09g090040.3 691 972 607 704 878 779 674 729 951 968 561 803 1105 686 610 Germin-like protein subfamily 1 member 15 (AHRD V3.3 *** A0A2G2W1B7_CAPBA) Solyc09g090050.4 814 545 609 515 643 636 580 591 643 603 747 626 618 560 611 RNA-binding ASCH domain protein (AHRD V3.3 *** AT2G20410.2) AT2G20410 Solyc09g090060.3 767 571 653 599 380 448 429 485 492 532 416 461 660 613 434 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A2G2W1C4_CAPBA) Solyc09g090070.1 4115 2276 1707 1426 239 257 245 228 1646 3898 2070 1425 2695 2484 1521 phosphate transporter 1 AT2G38940 Solyc09g090080.1 131 55 6 90 0 0 0 0 5 5 0 0 64 94 260 Phosphate transporter (AHRD V3.3 *** Q9AYT3_TOBAC) Solyc09g090090.2 0 6 3 19 48 34 27 29 12 7 19 50 2 10 8 Phosphoenolpyruvate carboxylase kinase 1 (AHRD V3.3 *** A0A2G2XZR5_CAPAN) AT3G04530 Solyc09g090100.3 1346 1004 1093 1120 876 860 852 773 1379 1136 1085 911 1223 1474 1247 cryptochrome 2 AT1G04400 Solyc09g090110.3 1034 1193 2200 2119 1607 1529 1487 1177 1616 1184 2037 1215 2384 2054 2442 Actin-depolymerizing factor (AHRD V3.3 *** A0A1U8GD07_CAPAN) AT2G31200 Solyc09g090120.3 427 421 376 371 326 320 334 321 342 390 355 410 451 377 368 histone acetyltransferase subunit NuA4-domain protein (AHRD V3.3 *** AT4G14385.8) AT4G14385 Solyc09g090130.3 472 352 553 214 224 248 191 133 205 174 1996 228 474 437 927 R2R3MYB transcription factor 15 AT3G23250 Solyc09g090140.4 7522 10581 9204 11313 11713 12159 12964 12626 9848 10372 7179 9412 13830 11297 10178 ferredoxin 1 AT1G04410 Solyc09g090150.4 2 3 1 1 0 2 3 2 0 1 0 0 0 0 0 Seed storage protein (AHRD V3.3 *** Q2TPW5_9ROSI) Solyc09g090160.3 2677 2064 1962 1792 1957 1723 1704 2065 2264 2279 1894 1978 2294 1943 2133 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1M3J2_ARTAN) AT3G23280 Solyc09g090170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g090180.1 2557 3892 2731 4132 11539 9424 9454 10141 4672 4055 6784 5254 6497 4507 4140 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A2G2W1D1_CAPBA) AT3G23290 Solyc09g090190.3 783 1873 1614 1333 1878 1722 2009 1976 1775 1381 1557 1158 1780 1523 1547 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MED4_ARTAN) AT4G14360 Solyc09g090200.4 2170 1270 1463 1434 1381 1504 1536 1280 1434 1690 1643 1185 1046 1325 1614 Serine/threonine-protein kinase (AHRD V3.3 *** A0A2I0WHR6_9ASPA) Solyc09g090210.3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A1I9LM53_ARATH) Solyc09g090220.3 74 70 45 63 61 57 47 73 80 58 29 77 44 92 42 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QEC4_9MAGN) AT3G23330 Solyc09g090225.1 2 5 8 5 2 3 6 9 0 4 4 9 3 10 0 Unknown protein Solyc09g090230.2 179 206 184 184 177 152 187 151 145 119 134 170 154 188 253 Casein kinase I (AHRD V3.3 *-* A0A2U1P195_ARTAN) Solyc09g090250.4 1177 1219 1490 1639 1143 1313 1210 1136 1815 1379 1481 1338 1364 1508 1586 Casein kinase I isoform epsilon (AHRD V3.3 *** A0A2G3CSD4_CAPCH) AT4G14340 Solyc09g090260.1 0 0 0 0 6 0 2 4 1 0 0 0 4 5 1 Unknown protein Solyc09g090270.3 1953 1534 1832 1646 1783 1829 1870 1842 2008 1648 2096 1893 1604 1726 2353 COP1-interacting protein-like protein (AHRD V3.3 *** F4K5Y4_ARATH) AT5G43310 Solyc09g090280.3 0 1 0 0 2 8 4 2 3 2 1 11 0 1 0 Protein phosphatase 2C-like protein 44-like (AHRD V3.3 *** A0A2K3PQ16_TRIPR) AT3G23360 Solyc09g090290.3 549 303 264 300 212 281 266 269 330 277 338 294 339 404 437 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* AT3G23370.1) AT3G23370 Solyc09g090300.3 2 3 1 8 0 0 2 1 2 0 0 0 0 0 13 dCTP pyrophosphatase-like protein (AHRD V3.3 *** Q9LSW0_ARATH) Solyc09g090310.3 1 0 0 9 0 0 0 0 0 0 0 0 4 0 69 Glycolipid transfer protein domain-containing protein (AHRD V3.3 *** A0A2U1Q6U6_ARTAN) Solyc09g090320.2 56 482 367 556 1189 1130 963 1452 564 273 394 746 103 298 339 Kinesin (AHRD V3.3 *** A0A200PVY6_9MAGN) AT4G14330 Solyc09g090330.3 184 259 268 279 458 321 394 409 288 253 261 348 205 221 261 harpin binding protein 1 AT3G23400 Solyc09g090340.3 327 885 698 826 1093 1062 1052 1314 770 699 607 1091 462 832 391 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT4G14310.1) AT4G14310 Solyc09g090350.3 46 39 47 68 4 5 10 1 39 25 64 25 47 66 120 Long-chain-alcohol oxidase (AHRD V3.3 *** A0A1U8G4D7_CAPAN) AT3G23410 Solyc09g090360.3 23 25 26 90 29 16 25 12 12 27 32 15 35 22 89 phosphate transporter PHO1-like (AHRD V3.3 *** A0A2I4DLD0_9ROSI) AT3G23430 Solyc09g090370.3 441 377 367 288 413 310 296 370 378 326 322 372 448 397 306 Transcription factor GTE1 (AHRD V3.3 *** A0A2G2ZUD9_CAPAN) AT2G34900 Solyc09g090380.1 263 243 401 289 528 480 460 414 248 202 364 292 367 273 440 Embryo sac development arrest 6 (AHRD V3.3 *** Q9LW53_ARATH) AT5G44060 Solyc09g090385.1 0 0 0 2 0 0 5 0 1 0 1 0 0 1 0 glycine-rich cell wall structural protein (AHRD V3.3 *-* XP_019071134.1) Solyc09g090400.4 471 621 438 358 278 362 396 429 261 262 350 431 704 582 420 Translation initiation factor eIF-2B subunit beta (AHRD V3.3 *** A0A1J3HDS0_NOCCA) Solyc09g090410.3 190 908 896 569 1105 791 876 1087 799 488 583 651 561 710 572 50S ribosomal protein L28 (AHRD V3.3 *** A0A1U8GBC9_CAPAN) AT2G33450 Solyc09g090420.4 2074 1774 1565 1610 1344 1481 1455 1362 1865 1419 1699 1704 1758 2053 1884 U2 snRNP auxiliary factor large subunit (AHRD V3.3 *-* A0A1I7S9N1_BURXY) AT2G33435 Solyc09g090430.3 1287 640 507 598 493 451 416 510 571 516 595 469 580 588 844 Cyanate hydratase (AHRD V3.3 *** A0A1U8G4F5_CAPAN) AT3G23490 Solyc09g090440.1 59 46 36 49 79 52 54 36 37 32 56 49 65 64 63 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PQE5_9MAGN) Solyc09g090445.1 176 53 81 68 11 21 17 13 93 52 102 72 37 45 71 jacalin-related lectin 3-like (AHRD V3.3 *** A0A2G2ZUE0_CAPAN) Solyc09g090450.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT2G16190.1) AT1G49330 Solyc09g090460.3 228 252 337 327 340 315 402 318 345 298 199 306 313 345 382 Nucleolar GTP-binding protein 1 (AHRD V3.3 *** A0A1J3HT43_NOCCA) AT1G80770 Solyc09g090470.3 116 173 250 205 350 281 295 249 290 212 429 238 79 112 137 Protein NRT1/ PTR FAMILY 5.2 (AHRD V3.3 *** A0A2G3CS67_CAPCH) AT5G46050 Solyc09g090480.2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 DUF810 domain-containing protein (AHRD V3.3 *** A0A1Q3AX67_CEPFO),Pfam:PF05664 AT2G33420 Solyc09g090490.3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Amine oxidase (AHRD V3.3 *** A0A2G2W0R3_CAPBA) AT1G31710 Solyc09g090500.3 257 142 298 192 59 94 62 46 2009 2403 6198 2379 193 385 420 Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V3.3 *** A0A2U1QM01_ARTAN),Pfam:PF02353 Solyc09g090510.3 1610 1220 1318 1067 798 935 1119 931 2418 1766 1365 1393 1490 1028 962 Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V3.3 *** A0A2U1QM01_ARTAN) AT3G23530 Solyc09g090520.3 4826 4522 2684 2579 2018 2370 2017 2375 2615 2557 2441 2853 3743 3604 2935 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4K4W6_ARATH) AT4G14300 Solyc09g090530.4 8 64 56 91 200 174 139 178 117 60 119 110 19 54 84 FK506-binding nuclear-like protein (AHRD V3.3 --* AT2G33400.1) Solyc09g090540.3 56 52 140 121 48 84 74 42 69 50 83 48 75 118 135 hypothetical protein (AHRD V3.3 *** AT2G33390.1) AT2G33390 Solyc09g090550.3 7 38 59 25 34 31 23 25 36 33 36 36 29 32 89 Arp2/3 complex 34 kDa subunit (AHRD V3.3 *** A0A2G2W1L9_CAPBA) AT2G33385 Solyc09g090560.2 38 48 46 20 77 54 48 36 29 39 15 33 53 51 44 plant viral-response family protein (DUF716) (AHRD V3.3 --* AT5G13890.3) Solyc09g090570.2 439 679 85 350 886 809 796 823 558 478 70 292 534 104 73 Proton gradient regulation 5 (AHRD V3.3 *** A0A2U1Q6W9_ARTAN) AT2G05620 Solyc09g090580.3 1354 1769 2049 1462 2122 2161 1984 1879 1436 1046 1625 1302 2034 1809 1996 translation initiation factor iso4E AT5G35620 Solyc09g090590.4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Caleosin (AHRD V3.3 *** A0A200PVT7_9MAGN) AT4G26740 Solyc09g090600.3 0 11 26 6 15 31 23 15 13 8 44 5 3 0 12 acid phosphatase 1-like (AHRD V3.3 *** A0A1U7W5M1_NICSY) AT1G04040 Solyc09g090610.3 491 957 954 739 453 568 590 549 468 372 609 503 1489 1147 1069 Ribosomal protein L17 (AHRD V3.3 *** Q5I7K4_WHEAT) AT2G33370 Solyc09g090620.1 0 0 0 0 1 1 1 0 2 1 0 1 0 0 3 Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 --* AT5G48620.6) Solyc09g090630.3 8 23 37 120 1 11 5 6 5 12 1 13 3 43 0 Histone-lysine N-methyltransferase SUVR4 (AHRD V3.3 *** A0A2G2ZUA4_CAPAN) Solyc09g090640.3 737 897 1398 1187 736 1027 974 737 945 858 1490 786 657 914 862 DUF3527 domain-containing protein (AHRD V3.3 *** A0A1Q3DBN1_CEPFO) AT2G33360 Solyc09g090645.1 1 12 12 5 14 10 13 17 18 13 6 12 4 14 0 Unknown protein Solyc09g090650.3 45 37 31 87 0 2 3 1 14 17 22 6 24 18 55 CCT motif family protein (AHRD V3.3 *** A0A2U1QLU6_ARTAN) AT1G04500 Solyc09g090660.3 6225 5308 3701 3765 3645 3884 3664 4115 3769 3867 3280 3967 4718 4827 4253 WD40 repeat (AHRD V3.3 *** A0A200PVU9_9MAGN) AT1G04510 Solyc09g090670.3 51 129 173 162 206 147 192 212 160 107 146 117 144 132 87 TLD-domain containing nucleolar protein (AHRD V3.3 *** A0A2U1NM40_ARTAN) AT2G05590 Solyc09g090680.3 90 634 598 455 1672 1601 1549 1347 565 280 667 609 231 433 186 Cysteine-rich repeat secretory protein 3 (AHRD V3.3 *** A0A2G3CR65_CAPCH) AT1G04520 Solyc09g090685.1 18 12 18 7 5 7 18 10 13 0 32 12 18 11 14 Unknown protein Solyc09g090690.4 179 182 142 165 76 123 129 109 143 141 127 141 209 264 150 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT4G13330.4) AT4G13330 Solyc09g090700.1 1669 1606 1230 1204 1293 1271 1240 1645 2241 1986 1685 1909 1885 1783 1699 Succinate semialdehyde dehydrogenase (AHRD V3.3 *** A0A2U1MA81_ARTAN) AT1G79440 Solyc09g090710.3 303 295 243 173 184 214 166 200 222 206 309 209 277 302 245 Unknown protein Solyc09g090720.3 2178 2202 1728 1773 1653 1763 1809 1561 1486 1577 1481 1727 1986 2097 1772 26S proteasome non-ATPase regulatory subunit 13 (AHRD V3.3 *** B6TA88_MAIZE) AT4G19006 Solyc09g090730.2 1185 868 301 363 52 84 63 87 592 1237 517 369 522 573 344 AMT1 AT4G13510 Solyc09g090740.4 700 908 917 539 530 554 534 585 591 325 654 484 1291 1094 1115 RNA helicase DEAD29 AT3G16840 Solyc09g090750.3 231 407 353 350 528 535 585 431 358 257 274 433 316 340 391 Haloacid dehalogenase-like hydrolase domain-containing protein (AHRD V3.3 *** A0A2G2ZU51_CAPAN),Pfam:PF13419 AT2G33255 Solyc09g090760.4 89 85 115 70 85 70 53 71 52 54 57 103 38 76 35 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1PVI2_ARTAN) AT1G04570 Solyc09g090770.2 27 21 13 25 34 34 28 27 18 30 4 39 30 21 11 Unknown protein Solyc09g090780.1 34 43 18 39 36 47 47 48 33 45 21 40 32 49 27 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q2Y2_9MAGN) Solyc09g090790.3 56 2 1 9 0 0 0 2 5 46 37 0 10 13 13 R2R3MYB transcription factor 79 AT3G24310 Solyc09g090800.2 424 118 104 22 0 0 0 0 10 89 48 13 13 75 145 AWPM-19-like family protein (AHRD V3.3 *** O23029_ARATH) AT1G04560 Solyc09g090810.3 1018 829 643 721 847 732 637 977 871 1165 561 913 635 709 573 Histone-lysine N-methyltransferase family member protein (AHRD V3.3 *** A0A2R6PX68_ACTCH) AT2G33290 Solyc09g090820.4 386 329 501 308 435 455 380 321 364 327 478 331 320 327 544 transmembrane protein (AHRD V3.3 *** AT1G04555.1) AT1G04555 Solyc09g090830.4 328 305 348 235 327 346 341 271 257 180 329 267 454 405 366 BolA protein (AHRD V3.3 *-* A0A200Q3B2_9MAGN) Solyc09g090840.3 176 467 330 313 510 388 431 525 436 257 374 399 393 438 383 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (AHRD V3.3 *** A0A2Z4MCS0_BREBE) AT1G48520 Solyc09g090850.3 0 5 13 5 3 5 2 0 3 1 0 1 1 5 11 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** Q9T0L6_ARATH) AT4G13450 Solyc09g090860.4 341 366 321 330 446 316 293 384 404 327 326 400 400 436 325 Sec20 family protein (AHRD V3.3 *** A0A2K3P5W6_TRIPR) AT3G24315 Solyc09g090870.3 692 608 738 587 638 673 806 544 525 452 605 518 498 666 846 DNA mismatch repair protein 1 AT3G24320 Solyc09g090875.1 13 1 1 8 6 5 1 4 5 0 0 3 1 1 14 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3P1W7_TRIPR) Solyc09g090880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g090890.3 24 15 6 11 16 19 11 11 11 9 29 17 15 13 25 DNA mismatch repair protein MSH1, mitochondrial (AHRD V3.3 *-* A0A2G2ZUJ8_CAPAN) Solyc09g090900.4 123 125 84 207 40 45 33 37 111 64 75 38 87 83 253 3-isopropylmalate dehydratase large subunit (AHRD V3.3 *** A0A2G3CJZ4_CAPCH) Solyc09g090910.3 668 774 1148 1137 1270 1413 1498 1065 1157 590 1142 994 590 995 1092 auxin-regulated IAA13 AT2G33310 Solyc09g090920.4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* O22783_ARATH) AT2G33320 Solyc09g090930.3 318 305 302 268 358 334 281 315 354 263 234 302 318 322 227 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* Q8VZ31_ARATH) AT1G04530 Solyc09g090940.3 1411 2173 1580 1571 2130 2075 1965 2325 1953 1414 1293 1791 2061 2085 1471 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *** F4K7E0_ARATH) AT5G43960 Solyc09g090960.4 488 600 390 459 775 739 821 752 526 420 431 449 443 412 623 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A2U1N2D5_ARTAN) AT1G60000 Solyc09g090970.4 199 56 15 5 0 2 0 2 55 44 0 10 52 11 11 pathogenesis-related protein STH-2-like (AHRD V3.3 *** A0A1U7Y3H6_NICSY) Solyc09g090980.3 2042 1146 730 1236 238 124 113 97 789 700 577 400 1318 1489 1979 pathogenesis-related protein STH-2-like (AHRD V3.3 *** A0A1U7Y3H6_NICSY) Solyc09g090990.2 3 0 0 0 0 0 0 0 8 0 0 0 1 0 0 Major allergen Pru ar 1 (AHRD V3.3 *** Q5GMN2_CAPCH) Solyc09g091000.4 51 37 9 3 0 0 0 0 436 15 0 13 12 46 46 Pathogenesis-related protein STH-2 (AHRD V3.3 *** PRS2_SOLTU) Solyc09g091010.3 425 530 734 536 715 803 720 530 505 388 807 439 551 661 699 transmembrane protein (AHRD V3.3 *** AT3G04310.2) AT2G33250 Solyc09g091020.3 2576 1724 1429 1757 1533 1623 1646 1535 1508 1818 1167 1346 1583 1669 1365 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** Q94C94_ARATH) AT1G04140 Solyc09g091030.3 1744 1005 723 892 922 947 741 889 847 1448 624 682 1109 898 2034 Beta-amylase (AHRD V3.3 *** Q1L5W8_NICLS) AT3G23920 Solyc09g091040.3 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 late embryogenesis abundant protein 2-like (AHRD V3.3 *** A0A2I4G2D7_9ROSI) AT4G13560 Solyc09g091050.4 571 446 532 653 590 510 543 603 738 604 484 627 373 486 565 C2 calcium-dependent membrane targeting (AHRD V3.3 *** A0A2U1PUT0_ARTAN) AT4G13550 Solyc09g091060.3 26 85 173 77 218 273 174 162 85 47 123 111 144 88 258 golgin subfamily A member 6-like protein 2 (AHRD V3.3 *** A0A2I4DJB1_9ROSI) AT4G13540 Solyc09g091070.3 719 594 518 404 470 377 399 530 540 468 358 599 495 466 315 Malate dehydrogenase (AHRD V3.3 *** O48906_MEDSA) Solyc09g091080.4 5 13 22 19 23 23 28 27 16 19 12 14 26 27 40 Myosin-7 (AHRD V3.3 *** A0A2G2ZU45_CAPAN) AT1G04600 Solyc09g091090.2 0 4 1 0 5 2 1 2 0 1 0 16 8 2 0 Flavin-containing monooxygenase (AHRD V3.3 *** D2IGV2_SOLLC) AT1G04610 Solyc09g091100.4 613 512 433 539 585 617 636 702 595 494 430 538 356 500 542 7-hydroxymethyl chlorophyll a reductase, chloroplastic (AHRD V3.3 *** A0A2G2VZY5_CAPBA) AT1G04620 Solyc09g091120.3 993 925 711 898 766 890 933 739 701 698 982 640 763 889 1014 BLISTER (AHRD V3.3 *** A0A2U1QGX3_ARTAN) AT3G23980 Solyc09g091130.4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200PVL1_9MAGN) Solyc09g091140.4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 Glutathione S-transferase (AHRD V3.3 *** A0A200PVL1_9MAGN) Solyc09g091150.2 207 134 107 90 79 44 69 50 72 161 73 67 89 149 146 F-box domain, cyclin-like protein (AHRD V3.3 *** A0A2U1Q5P3_ARTAN) Solyc09g091160.1 252 87 250 107 73 82 73 37 82 97 152 72 115 133 276 F-box domain (AHRD V3.3 *-* A0A200PVK2_9MAGN) Solyc09g091170.4 707 745 980 861 903 1067 1006 1055 917 771 774 827 908 767 926 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B (AHRD V3.3 *** A0A2G3CRY5_CAPCH) AT2G33220 Solyc09g091180.3 1263 2825 2000 1398 1642 1801 1662 1797 1845 1172 1335 1751 3324 2819 2082 60 kDa chaperonin (AHRD V3.3 *** Q8H903_ORYSJ) Solyc09g091190.3 203 193 168 205 189 193 176 117 170 136 184 158 255 229 205 PHD finger protein ING (AHRD V3.3 *** A0A2G2ZU28_CAPAN) AT3G24010 Solyc09g091200.3 3 12 21 7 11 13 13 8 11 11 11 5 9 11 30 Serinc-domain containing serine and sphingolipid biosynthesis protein (AHRD V3.3 *** A0A2U1P747_ARTAN) AT2G33205 Solyc09g091210.4 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 Dirigent protein (AHRD V3.3 *** K4CWE7_SOLLC) AT4G13580 Solyc09g091220.3 10 2 23 16 20 17 3 17 6 13 16 4 6 8 6 F-box associated interaction domain-containing protein (AHRD V3.3 *** A0A2U1PT01_ARTAN) AT3G06240 Solyc09g091230.4 116 217 135 348 206 246 242 250 198 187 157 189 238 253 204 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** Q9LIQ3_ARATH) AT3G24040 Solyc09g091240.4 328 366 322 278 531 450 417 408 442 323 346 437 343 408 420 GDT1-like protein 2, chloroplastic (AHRD V3.3 *** A0A2G3CRV7_CAPCH) AT4G13590 Solyc09g091250.4 1693 1357 747 767 845 882 726 964 927 728 567 776 1217 1106 951 GATA transcription factor (AHRD V3.3 *** A0A1S3CCM6_CUCME) AT3G24050 Solyc09g091260.3 425 346 494 745 267 376 411 376 478 431 440 273 488 387 603 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A2R6PXD2_ACTCH) AT2G33170 Solyc09g091270.3 108 252 416 211 739 570 420 459 324 272 329 351 391 330 178 cotton fiber protein (AHRD V3.3 *** AT5G13880.2) AT5G47920 Solyc09g091280.4 2533 3222 3030 2908 3686 3750 3660 3858 2907 2760 2318 3682 2784 3359 2337 Retinoblastoma-related protein (AHRD V3.3 *** A0A2G2ZU20_CAPAN) AT3G12280 Solyc09g091290.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *** A0A118JZS1_CYNCS) AT4G24974 Solyc09g091300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *** A0A118JZS1_CYNCS) AT4G24974 Solyc09g091310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility protein S1 family (AHRD V3.3 *** A0A2U1P1N3_ARTAN) AT4G24974 Solyc09g091320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *-* A0A2U1LYE3_ARTAN) AT4G24974 Solyc09g091330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *-* A0A2U1LYE3_ARTAN) AT4G24974 Solyc09g091340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *** A0A118JZS1_CYNCS) AT4G24974 Solyc09g091350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *-* A0A2U1LYE3_ARTAN) AT4G24974 Solyc09g091360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *** A0A1R3G4K9_COCAP) AT3G24060 Solyc09g091370.4 16 146 165 135 245 243 365 250 186 67 135 170 83 182 82 holliday junction resolvase (AHRD V3.3 *** AT1G04650.1) AT1G04650 Solyc09g091380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g091390.3 1 23 29 18 9 9 9 7 45 16 54 13 10 10 1 glycine-rich protein 5-like (AHRD V3.3 *-* XP_004247821.1) Solyc09g091400.4 5 48 25 38 44 46 39 73 20 34 24 58 12 46 7 Receptor-like protein kinase 2 (AHRD V3.3 *** A0A2G2W1T2_CAPBA) AT3G24240 Solyc09g091410.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (AHRD V3.3 *-* ACCD_SOLLC) Solyc09g091415.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g091420.4 289 497 525 448 650 612 547 463 370 435 432 454 745 531 434 Inosine triphosphate pyrophosphatase (AHRD V3.3 *** A0A2G2W1Y2_CAPBA) AT4G13720 Solyc09g091430.4 588 2789 1661 3576 3638 3811 4652 3666 2321 2204 2627 2467 1349 1980 1885 Pectate lyase (AHRD V3.3 *** A0A2G2W1U1_CAPBA) AT4G13710 Solyc09g091440.3 1426 2050 1847 1818 2565 2183 2071 2334 2107 1542 1394 1756 2263 2136 1564 Histone deacetylase (AHRD V3.3 *** A0A1U8GVA3_CAPAN) AT4G38130 Solyc09g091450.3 747 775 606 689 783 721 756 654 693 580 641 680 970 959 587 DNA polymerase delta subunit 4 (AHRD V3.3 *** A0A1U8GX30_CAPAN) AT1G09815 Solyc09g091455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g091460.3 21 25 112 34 45 52 28 41 37 52 45 51 47 46 38 PB1 domain-containing protein tyrosine kinase (AHRD V3.3 *-* F4I5S1_ARATH) AT1G04700 Solyc09g091470.3 1734 1426 1283 1240 886 703 796 742 1670 1640 1291 879 1851 1661 1562 3-ketoacyl-CoA thiolase peroxisomal-like (AHRD V3.3 *** A0A2K3P5R8_TRIPR) AT2G33150 Solyc09g091480.4 1130 924 943 847 754 874 928 733 806 791 1093 779 1002 1021 1037 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1MK33_ARTAN) AT1G04790 Solyc09g091490.3 3 12 0 0 2 3 5 3 3 4 0 6 12 2 8 Transcription factor jumonji (JmjC) domain-containing protein (AHRD V3.3 *** C0SUU8_ARATH) Solyc09g091500.3 328 478 636 482 715 814 791 616 591 443 640 579 638 501 569 U6 snRNA-associated Sm-like protein LSm5 (AHRD V3.3 *** A0A1U8F707_CAPAN) AT5G48870 Solyc09g091510.3 295 632 390 332 112 101 135 73 2983 584 804 1096 1141 600 855 chalcone synthase 1 AT5G13930 Solyc09g091520.2 0 6 2 0 0 0 2 1 2 2 6 0 3 0 0 60S acidic ribosomal protein P0 (AHRD V3.3 *** A0A2G3CRU5_CAPCH) Solyc09g091530.2 0 1 13 9 0 0 0 0 0 1 0 0 2 4 4 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q9FJZ6_ARATH) AT5G04370 Solyc09g091540.2 0 11 0 5 17 13 13 16 6 0 1 8 0 1 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PMX3_ARTAN) AT5G04370 Solyc09g091550.3 281 336 40 247 515 416 395 308 150 189 20 98 677 93 66 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PMX3_ARTAN) AT5G04370 Solyc09g091560.3 516 459 642 615 412 555 551 469 562 447 589 453 515 544 510 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1PSX4_ARTAN) AT1G04780 Solyc09g091570.2 731 570 557 527 485 515 521 485 588 583 665 565 467 467 724 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (AHRD V3.3 *** A0A0D5XRL2_9PSED) AT3G24200 Solyc09g091580.3 395 684 306 655 625 650 713 794 764 632 381 439 431 355 423 Protein kinase domain (AHRD V3.3 *** A0A200QUN4_9MAGN) AT3G24190 Solyc09g091590.3 245 354 216 239 319 315 247 410 277 232 156 264 356 299 159 Alba DNA/RNA-binding protein (AHRD V3.3 *-* A0A1I9LSC0_ARATH) AT3G07030 Solyc09g091600.4 233 195 513 334 94 91 89 74 247 249 468 342 461 233 615 Protein SULFUR DEFICIENCY-INDUCED 1 (AHRD V3.3 *** A0A2G2ZTV9_CAPAN) AT1G04770 Solyc09g091610.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vesicle-associated membrane protein (AHRD V3.3 *** A0A1U8GH30_CAPAN) Solyc09g091615.1 0 0 0 0 0 0 5 2 0 0 0 4 0 0 0 F-box/kelch-repeat protein At3g06240-like (AHRD V3.3 *-* XP_004247950.1) Solyc09g091630.1 1 0 0 0 3 0 0 0 0 0 0 3 0 0 0 BnaUnng01800D protein (AHRD V3.3 *-* A0A078JHC3_BRANA) Solyc09g091640.1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 Unknown protein Solyc09g091650.3 201 797 818 775 1482 1191 1217 1530 945 920 640 1131 608 1020 333 Replication factor C subunit 1 (AHRD V3.3 *-* A0A1Z5JWY4_FISSO) AT1G04730 Solyc09g091660.3 2618 1475 1510 1429 100 155 118 120 1296 1988 1252 451 1290 2053 1843 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) AT1G15520 Solyc09g091670.3 150 45 4 2 0 0 2 0 34 26 19 5 17 42 6 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) AT1G15520 Solyc09g091680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3NXX3_TRIPR) Solyc09g091690.1 288 215 178 169 147 185 146 166 159 329 194 197 177 141 189 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) AT3G06240 Solyc09g091700.4 1 10 10 10 0 8 3 0 18 29 51 13 3 8 0 2-alkenal reductase (NADP(+)-dependent)-like (AHRD V3.3 *** A0A2I4HQE7_9ROSI) Solyc09g091710.3 906 599 739 778 667 756 670 653 783 813 711 790 692 769 825 F-box associated interaction domain-containing protein (AHRD V3.3 *** A0A2U1PT01_ARTAN) AT3G23880 Solyc09g091720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flavin-containing monooxygenase (AHRD V3.3 *** A0A2G2W209_CAPBA) AT1G48910 Solyc09g091730.4 12 32 42 15 37 36 19 31 45 20 26 22 44 21 12 Pectinesterase (AHRD V3.3 *** A0A2G2VIL1_CAPBA) AT3G24130 Solyc09g091740.4 2248 3567 2450 2012 2428 2480 2355 2454 1893 1690 1946 1966 3733 2915 2627 60S ribosomal protein L13a (AHRD V3.3 *** B6SJA0_MAIZE) AT5G48760 Solyc09g091750.3 2240 3725 3826 3718 4320 4360 4221 3830 3434 2728 3323 3108 4170 3992 3704 26S proteasome non-ATPase regulatory subunit 1 homolog (AHRD V3.3 *** A0A2G2W254_CAPBA) AT2G32730 Solyc09g091760.3 4 22 34 36 11 13 14 18 96 23 71 32 6 8 16 bHLH transcription factor 151 Solyc09g091770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g091780.3 1212 838 915 763 1041 1122 1013 1133 1065 653 1015 819 1054 890 1154 LES441249 p27KIP1-related-protein 1 AT2G32710 Solyc09g091790.3 710 487 487 564 468 474 613 465 574 511 558 519 624 514 612 E3 ubiquitin-protein ligase PRT1 (AHRD V3.3 *** A0A2I4G9X7_9ROSI) AT3G24800 Solyc09g091800.4 3 38 47 32 76 81 91 32 20 8 18 27 9 28 9 Unknown protein Solyc09g091810.1 114 158 182 201 210 231 181 197 163 249 92 251 186 133 105 Unknown protein Solyc09g091820.4 1879 3688 3294 4024 4018 3843 3644 3600 3491 2962 3494 3441 4130 3765 3425 putative type 1 membrane protein (AHRD V3.3 *** AT3G24160.1) AT3G24160 Solyc09g091830.4 246 198 173 169 116 137 164 143 248 162 192 195 165 177 213 plastid transcriptionally active 5 (AHRD V3.3 *** AT4G13670.1) AT4G13670 Solyc09g091840.4 1668 1438 1260 1296 900 898 923 960 1471 1200 976 1047 2206 1759 1700 Glutathione reductase (AHRD V3.3 *** A0A2H4ZA20_LYCCN) AT3G24170 Solyc09g091850.4 964 557 621 743 584 718 738 618 705 627 790 572 527 668 896 Non-lysosomal glucosylceramidase (AHRD V3.3 *** A0A328D7Z8_9ASTE) AT3G24180 Solyc09g091860.4 488 481 570 555 521 592 550 536 561 416 506 618 369 619 480 Poly(A) RNA polymerase GLD2 (AHRD V3.3 *-* A0A2I0VGJ9_9ASPA) AT3G45750 Solyc09g091870.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Flavin-containing monooxygenase (AHRD V3.3 *** A0A1U8F7A2_CAPAN) AT1G48910 Solyc09g091880.4 127 314 307 244 224 248 287 342 288 218 171 290 399 294 144 Myb family transcription factor APL (AHRD V3.3 *** A0A1U8G4T8_CAPAN) AT3G24120 Solyc09g091883.1 1 7 17 21 13 12 5 6 3 6 9 15 3 4 1 Small ubiquitin-related modifier (AHRD V3.3 *** A0A1U8GH93_CAPAN) Solyc09g091887.1 0 3 10 36 0 5 7 3 0 1 1 1 0 9 0 Small ubiquitin-related modifier (AHRD V3.3 *** A0A1U8GH93_CAPAN) Solyc09g091900.4 407 988 916 781 1212 1396 1039 1105 739 731 785 973 1173 1038 713 ER lumen protein-retaining receptor (AHRD V3.3 *** A0A1U8G5I2_CAPAN) AT3G25040 Solyc09g091910.2 6 10 14 24 14 16 16 19 4 2 3 28 5 15 20 Purple acid phosphatase (AHRD V3.3 *** A0A2G2W1Z0_CAPBA) AT3G07130 Solyc09g091920.3 29 155 221 171 316 299 311 260 100 75 129 129 141 133 59 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* F4JT39_ARATH) AT4G13600 Solyc09g091930.3 393 362 372 427 348 430 409 394 432 304 421 366 256 402 406 Ubiquitinyl hydrolase 1 (AHRD V3.3 *** A0A2G2ZTM8_CAPAN) AT1G04860 Solyc09g091940.2 0 0 3 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc09g091950.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2W1X6_CAPBA) AT4G13620 Solyc09g091960.3 178 299 249 195 244 319 220 192 223 207 154 256 135 259 133 High mobility group B protein 15 (AHRD V3.3 *** A0A1U8FAJ0_CAPAN) AT1G04880 Solyc09g091965.1 1 4 0 3 0 5 4 1 4 0 0 0 0 1 1 Unknown protein Solyc09g091970.4 62 179 183 156 164 225 248 190 237 91 154 187 118 118 116 Epimerase family protein SDR39U1-like protein, chloroplastic (AHRD V3.3 *** A0A2G3CRJ5_CAPCH) AT2G21280 Solyc09g091980.3 898 875 1038 837 813 959 1058 673 750 682 939 662 1000 979 1353 N-alpha-acetyltransferase 30 (AHRD V3.3 *** A0A1U8F026_CAPAN) AT2G38130 Solyc09g091990.3 113 82 68 113 34 32 26 40 137 130 122 68 76 53 68 Receptor like protein kinase S.2 (AHRD V3.3 *** A0A2G2ZTR0_CAPAN) Solyc09g092010.1 102 48 131 84 22 35 34 27 118 69 240 37 100 63 154 Receptor like protein kinase S.2 (AHRD V3.3 *-* A0A2G3AS19_CAPCH) Solyc09g092020.4 15 17 54 53 19 42 33 19 44 19 61 27 19 30 26 Calcium-dependent protein kinase (AHRD V3.3 *-* B2KTA0_WHEAT) AT3G24110 Solyc09g092025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Small ubiquitin-related modifier (AHRD V3.3 *** A0A1U8GH93_CAPAN) Solyc09g092030.4 372 337 451 423 324 430 358 396 379 309 417 334 379 379 396 UV radiation resistance-associated gene protein (AHRD V3.3 *** A0A2K3PEJ9_TRIPR) AT2G32760 Solyc09g092040.3 1552 2709 1844 1513 2059 1798 1794 2341 1889 1794 1380 1720 3248 2356 1505 UBX domain-containing protein 1 (AHRD V3.3 *-* A0A1J3FKK2_NOCCA) Solyc09g092050.4 37 100 83 81 73 85 106 94 90 69 44 98 66 112 80 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2W2D7_CAPBA) AT1G04840 Solyc09g092060.3 0 4 0 2 0 0 0 5 1 2 0 0 0 0 0 F-box/kelch-repeat protein At3g23880-like (AHRD V3.3 --* XP_021719013.1) Solyc09g092070.4 2175 1123 1087 1073 966 907 903 958 1141 1431 986 1151 865 966 1175 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** Q9SVN9_ARATH) AT4G13730 Solyc09g092080.4 639 1320 1243 862 914 850 838 652 575 477 712 660 1810 1395 1019 Unknown protein Solyc09g092090.4 429 694 580 514 411 456 539 446 514 347 414 455 883 674 556 50S ribosomal protein L13 (AHRD V3.3 *** A0A2G2ZTF7_CAPAN) AT3G01790 Solyc09g092100.4 478 559 511 515 352 381 425 353 430 357 412 365 544 614 623 Histidine kinase/DNA gyrase B (AHRD V3.3 *** A0A2K3NM59_TRIPR) AT4G13750 Solyc09g092110.4 1147 117 325 127 193 179 245 119 251 1252 508 379 48 159 644 Light-regulated protein (AHRD V3.3 *** A0A2G3CRI7_CAPCH) AT3G26740 Solyc09g092120.4 1101 972 916 922 1095 1072 1163 845 680 777 772 740 923 966 964 Alkaline ceramidase (AHRD V3.3 *** ACER_ARATH) AT4G22330 Solyc09g092130.3 8 54 15 50 64 70 102 153 40 45 33 35 42 45 108 Sucrose phosphate synthase (AHRD V3.3 *** A0A0B5L7E2_LILDA) AT1G04920 Solyc09g092140.3 1421 1368 1465 1264 1136 1276 1398 1054 1029 1036 1455 1184 1543 1592 1407 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q8VYT6_ARATH) AT2G31740 Solyc09g092145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g092150.1 25 31 39 25 13 16 21 24 26 11 12 18 10 32 16 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3D110_CAPCH) AT2G20540 Solyc09g092160.2 871 420 470 426 247 311 272 288 420 474 454 370 291 446 584 beta-galactosidase 2 AT2G32810 Solyc09g092170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell wall / vacuolar inhibitor of fructosidase 2 (AHRD V3.3 -** A0A1J3EYA9_NOCCA) Solyc09g092180.3 94 176 212 197 265 239 271 266 201 134 127 177 109 219 84 RNA-directed DNA polymerase (Reverse transcriptase)-related family protein (AHRD V3.3 *** F4J6J4_ARATH) AT3G23910 Solyc09g092190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g092200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein BOBBER 1 (AHRD V3.3 *** A0A2G3D107_CAPCH) Solyc09g092210.4 196 122 183 151 143 198 183 163 180 123 193 128 133 165 327 Protein BOBBER 1 (AHRD V3.3 *-* A0A2G2W249_CAPBA) Solyc09g092220.3 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 magnesium transporter NIPA (DUF803) (AHRD V3.3 *** AT4G13800.8) AT4G13800 Solyc09g092230.2 17 55 94 57 69 87 98 83 47 44 114 71 29 49 32 Unknown protein Solyc09g092235.1 8 41 48 107 60 44 53 30 44 40 71 14 29 33 75 Rapid ALkalinization Factor (AHRD V3.3 *** A0A200Q5M2_9MAGN) AT4G14010 Solyc09g092240.3 1616 1280 888 833 671 663 794 661 934 730 678 882 1152 1321 1186 small subunit processome component 20 homolog isoform X1 (AHRD V3.3 *** A0A2I4HWH3_9ROSI) AT4G30990 Solyc09g092250.3 3567 2333 1887 1519 1669 1794 1712 1898 2194 1994 1679 1840 1784 1945 1639 Zinc finger transcription factor 55 AT3G23900 Solyc09g092260.4 768 231 707 370 41 52 65 38 122 707 677 215 83 349 953 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G3AV72_CAPCH) AT4G13830 Solyc09g092270.3 1295 1133 1209 1047 575 631 550 622 1193 923 1181 1162 960 1265 2066 Transferase (AHRD V3.3 *** A0A200PUF8_9MAGN) AT3G23840 Solyc09g092280.1 33 11 9 21 0 0 0 0 3 6 25 1 26 18 32 Late blight resistance protein (AHRD V3.3 *** B7U1D7_9SOLN) Solyc09g092283.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VHP9_9ASPA) Solyc09g092287.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VHP9_9ASPA) Solyc09g092290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late blight resistance protein (AHRD V3.3 *** B7U1D7_9SOLN) Solyc09g092300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late blight resistance protein (AHRD V3.3 *-* B7U1D8_9SOLN) Solyc09g092310.1 15 18 16 16 0 0 1 0 10 8 9 11 35 15 17 Late blight resistance protein (AHRD V3.3 *** B7U1D7_9SOLN) Solyc09g092320.3 425 560 357 276 311 278 242 325 174 217 234 228 955 664 518 RNA binding protein (AHRD V3.3 *** O23793_NICSY) Solyc09g092330.3 1069 1008 1523 804 1142 951 988 1022 1177 2390 2168 672 1193 688 1722 UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** A0A1J3GBJ9_NOCCA) AT3G23820 Solyc09g092340.4 98 250 374 361 299 449 456 344 347 280 287 401 364 374 374 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2G2XZP4_CAPAN) AT4G13870 Solyc09g092350.1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 PMEI domain-containing protein (AHRD V3.3 *-* A0A1Q3B489_CEPFO) Solyc09g092360.3 259 253 198 230 253 229 208 244 197 267 177 275 253 225 184 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8G455_CAPAN) AT3G46870 Solyc09g092370.1 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 Plant self-incompatibility S1 (AHRD V3.3 *** A0A200R785_9MAGN) AT4G24974 Solyc09g092380.3 17997 29171 26153 21764 27063 24546 26224 25951 23967 21418 24310 21490 26447 23683 27437 S-adenosyl-l-homocysteine hydrolase AT3G23810 Solyc09g092390.2 2555 8988 6321 6163 7396 7493 8777 7855 7560 4922 5594 5547 8586 8128 8013 Adenosylhomocysteinase (AHRD V3.3 *** A0A2G2W262_CAPBA) AT3G23810 Solyc09g092400.2 2 2 6 13 0 8 5 0 7 9 20 8 3 14 14 Apyrase (AHRD V3.3 *** A0A2G2W266_CAPBA) Solyc09g092410.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3PDT8_TRIPR) AT5G36930 Solyc09g092420.2 133 47 61 42 14 11 12 15 44 74 53 47 17 68 101 Amino acid/polyamine transporter I (AHRD V3.3 *** A0A200R6T7_9MAGN) Solyc09g092430.3 2538 1653 2573 2247 1599 1411 1489 1656 3826 2577 3070 3850 1673 2856 2082 Selenium-binding protein (AHRD V3.3 *** A0A200Q5C9_9MAGN) AT4G14040 Solyc09g092440.1 88 112 114 142 85 96 107 99 74 64 107 93 142 109 105 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q5C6_9MAGN) AT4G14050 Solyc09g092450.3 312 359 371 329 340 310 339 316 489 292 315 252 437 380 316 Long-chain acyl-CoA synthetase (AHRD V3.3 *** A0A1Z5KCI0_FISSO) AT3G23790 Solyc09g092460.4 382 570 749 584 703 708 875 657 544 393 597 490 381 388 520 receptor-like kinase TMK4 (AHRD V3.3 *** A0A2G2XZ75_CAPAN) AT3G23750 Solyc09g092470.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 sesquiterpene synthase 14 Solyc09g092480.1 144 112 9 24 3 1 2 2 6 68 15 0 249 14 10 Glycosyltransferase (AHRD V3.3 *** A0A2I4GJH4_9ROSI) AT4G15550 Solyc09g092490.3 109 84 21 16 1 1 1 0 22 80 9 7 191 12 12 Glycosyltransferase (AHRD V3.3 *-* A0A2I4GJH4_9ROSI) Solyc09g092500.1 78 106 34 24 26 26 23 35 42 593 11 13 664 9 66 UDP-glycosyltransferase 75C1 (AHRD V3.3 *** U75C1_SOLLC) AT4G15550 Solyc09g092510.3 54 591 795 583 1099 1162 1161 1109 808 417 589 1007 357 824 251 hypothetical protein (AHRD V3.3 *-* AT3G23740.1) AT3G23740 Solyc09g092520.3 1087 1139 2069 194 115 163 151 99 939 724 4664 241 147 243 80 xyloglucan endotransglycosylase AT3G23730 Solyc09g092530.4 2682 1775 1204 2223 1358 1056 1514 1388 1217 2280 1242 1743 2032 2028 951 Protein TIC 22-like, chloroplastic (AHRD V3.3 *** A0A1U8G491_CAPAN) AT3G23710 Solyc09g092540.1 23 5 4 9 0 0 1 0 9 7 3 7 24 18 16 F-box protein (AHRD V3.3 *** A0A1J3HTG0_NOCCA) AT1G30790 Solyc09g092550.4 2751 3144 2649 2777 3155 3071 2830 3401 3921 3058 3032 3286 2689 2785 2441 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *-* AT4G14200.1) AT4G14200 Solyc09g092560.4 42 12 50 34 8 9 4 0 28 14 37 17 6 37 22 Cytochrome (AHRD V3.3 *** A0A2G2W281_CAPBA) AT4G31500 Solyc09g092580.4 64 68 55 51 0 2 2 3 189 271 94 364 79 39 32 Cytochrome (AHRD V3.3 *** A0A2G2ZTD7_CAPAN) AT4G31500 Solyc09g150158.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g092590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G3CRG6_CAPCH) AT4G31500 Solyc09g092600.3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8G4E5_CAPAN) AT4G31500 Solyc09g092620.3 58 55 48 33 3 21 9 3 39 53 102 56 74 36 32 Cytochrome (AHRD V3.3 *** A0A1U8G4E5_CAPAN) AT4G31500 Solyc09g092640.3 26 23 1 13 0 6 1 2 15 9 0 0 33 5 22 Cytochrome (AHRD V3.3 *** A0A1U8G4E5_CAPAN) AT4G31500 Solyc09g092645.1 29 11 5 21 10 11 2 0 6 5 4 5 14 10 19 Cytochrome (AHRD V3.3 *** A0A1U8G4E5_CAPAN) Solyc09g092670.3 118 102 9 124 22 25 39 28 57 44 6 15 75 44 39 Cytochrome (AHRD V3.3 *** A0A1U8G4E5_CAPAN) AT4G31500 Solyc09g092680.4 1009 1393 1417 1358 1689 1521 1424 1518 1494 1402 1157 1374 1370 1616 1119 Protein transport protein SEC23 (AHRD V3.3 *** A0A2G2W2H2_CAPBA) AT3G23660 Solyc09g092690.3 27 45 113 95 153 192 166 245 114 37 53 114 15 77 49 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G2W2H8_CAPBA) Solyc09g092700.3 1 4 4 6 19 18 9 5 7 14 9 3 0 0 0 glycine-rich cell wall structural protein-like isoform X1 (AHRD V3.3 *** XP_004247909.1) Solyc09g092720.3 943 774 1022 482 2081 2203 1707 1486 1129 728 1306 988 988 692 1029 glycine-rich protein 3 short isoform-like (AHRD V3.3 *** XP_004247911.1) Solyc09g092725.1 146 129 105 56 12 42 36 30 139 89 241 116 156 225 118 FAM10 family protein At4g22670-like (AHRD V3.3 *-* XP_010326878.1) Solyc09g092750.3 35 23 99 61 11 18 19 6 49 28 241 53 43 99 66 Unknown protein Solyc09g092760.2 313 312 393 256 404 428 388 385 700 446 339 308 513 252 331 glycine-rich cell wall structural protein-like (AHRD V3.3 *-* XP_010326879.1) Solyc09g092763.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2H4NAQ9_9ORYZ) Solyc09g092765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2H4NAQ9_9ORYZ) Solyc09g092767.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2H4NAQ9_9ORYZ) Solyc09g097760.3 14 155 7 72 0 0 2 0 1 1 6 0 11 111 319 Glycine-rich protein (AHRD V3.3 *-* A0A2G2W2G9_CAPBA) Solyc09g097770.3 26433 12411 12187 12198 2229 1892 1462 1575 6504 7563 9789 4113 16550 10892 32409 Cell wall protein (AHRD V3.3 *** Q40142_SOLLC) Solyc09g097780.2 975 736 459 347 193 215 134 170 516 663 426 386 934 520 624 Glycine-rich protein (AHRD V3.3 *-* A0A2G2ZTB9_CAPAN) Solyc09g082810.3 125 181 88 58 5 13 10 12 213 148 51 90 820 427 2641 Unknown protein Solyc09g097790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g097800.2 0 2 0 0 4 0 1 3 0 4 0 0 0 6 0 Unknown protein Solyc09g097810.3 6 7 0 2 0 0 0 0 1 1 1 0 3 67 20 SAR8.2 protein (AHRD V3.3 *** Q947G5_CAPAN) Solyc09g097820.3 682 602 549 488 554 576 578 662 528 429 344 464 746 658 598 RNA helicase family protein (AHRD V3.3 *** A0A2U1P2E3_ARTAN) AT4G18465 Solyc09g097830.4 5811 3329 2685 2834 3224 2734 2760 3406 3977 5343 2812 3982 2683 3148 3980 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1Q1B2_ARTAN) AT3G04240 Solyc09g097840.2 71 154 96 115 124 118 110 93 112 64 129 110 137 177 150 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1NT88_ARTAN) AT5G18390 Solyc09g097850.1 199 226 452 409 307 407 399 277 233 233 353 203 433 419 632 Cysteine proteinase inhibitor (AHRD V3.3 *** A0A2G3BAN0_CAPCH) AT2G31980 Solyc09g097860.4 62 366 368 574 873 980 875 1098 627 250 356 597 82 342 220 Kinesin-like protein KIN12B (AHRD V3.3 *** A0A2G2YQB5_CAPAN) AT3G23670 Solyc09g097870.4 115 183 411 255 116 117 82 53 292 125 1042 76 265 218 412 bHLH transcription factor 062 AT3G07340 Solyc09g097880.4 1374 1072 1136 943 882 899 1061 872 1034 1071 1102 1014 1036 1218 1056 DNA topoisomerase (AHRD V3.3 *** A0A2G3ATQ7_CAPCH) AT2G32000 Solyc09g097890.2 5 54 80 56 55 36 40 31 52 6 52 18 17 29 37 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A2G2YQA7_CAPAN) Solyc09g097900.3 153 315 179 248 415 444 442 336 244 230 236 192 273 212 230 Ras-related protein RABA5d (AHRD V3.3 *** A0A2G2Y216_CAPAN) AT3G07410 Solyc09g097910.4 348 299 238 294 545 667 589 484 326 338 216 304 189 142 237 30S ribosomal protein s1-like (AHRD V3.3 *** A0A2K3PDC1_TRIPR) AT3G23700 Solyc09g097920.3 323 228 218 257 180 206 233 178 221 241 285 269 158 230 259 Transcription termination factor (AHRD V3.3 *** A0A2U1MCA6_ARTAN) AT1G74120 Solyc09g097930.4 94 161 100 117 122 131 170 107 88 86 170 124 233 166 124 dCTP pyrophosphatase 1 (AHRD V3.3 *** A0A1U8G4Q7_CAPAN) Solyc09g097940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g097950.3 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *-* A0A1Y1HY98_KLENI) Solyc09g097960.3 291 1442 53 16 0 1 0 0 7 376 0 2 7837 201 910 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) AT1G60710 Solyc09g097970.3 200 380 456 486 702 678 702 662 583 366 594 592 563 471 496 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) AT1G60710 Solyc09g097980.4 90 144 199 140 222 159 204 218 180 200 134 185 181 138 203 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) AT1G60710 Solyc09g097990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aldo/keto reductase (AHRD V3.3 *-* A0A2K3PHH9_TRIPR) Solyc09g098000.4 0 0 2 0 0 0 2 0 0 0 0 2 9 0 0 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) AT1G60710 Solyc09g098010.3 4 3 1 3 2 4 16 6 3 0 0 0 5 5 0 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A1U8G9M4_CAPAN) AT2G45550 Solyc09g098770.2 1 0 5 13 0 0 1 0 0 3 25 0 1 2 28 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A2G3CQY8_CAPCH) AT2G45550 Solyc09g098030.4 265 228 124 420 42 42 28 29 226 200 246 219 235 189 761 Geraniol 8-hydroxylase (AHRD V3.3 *** A0A2G3CQY8_CAPCH) AT2G45550 Solyc09g098040.3 2337 2553 2521 3039 2470 3040 3221 2725 3596 2587 3071 2614 2276 3096 4299 Phosphoglucan, water dikinase, chloroplastic (AHRD V3.3 *** A0A1U8G4P2_CAPAN) AT5G26570 Solyc09g098050.2 38 111 120 122 81 73 84 65 49 63 108 36 76 89 159 Ankyrin repeat (AHRD V3.3 *** A0A200PSP7_9MAGN) Solyc09g098060.3 45 73 43 58 20 49 32 37 38 66 53 28 84 71 96 Ankyrin repeat (AHRD V3.3 *-* A0A200PSP7_9MAGN) Solyc09g098070.3 729 558 781 630 430 424 435 443 554 743 649 530 604 633 547 MACPF domain-containing protein (AHRD V3.3 *** A0A1Q3AT86_CEPFO) Solyc09g098080.4 4 3 0 0 0 0 0 0 0 0 4 0 8 23 0 Glycosyltransferase (AHRD V3.3 *** Q94IF2_TOBAC) AT3G21750 Solyc09g098090.4 262 195 231 204 143 167 199 114 259 243 297 205 228 222 414 NAD(P)-linked oxidoreductase, aldo/keto reductase family protein (AHRD V3.3 *** A0A1Y1HY98_KLENI) Solyc09g098100.4 159 220 100 135 223 183 238 276 405 207 152 180 170 198 263 NB-LRR tospovirus immune receptor (AHRD V3.3 *** A0A221IWV2_SOLPN) Solyc09g098110.4 187 202 188 162 254 193 223 226 257 180 177 196 232 261 157 bHLH transcription factor 092 AT1G05805 Solyc09g098115.1 0 3 5 3 2 6 11 0 6 4 4 5 2 13 7 voltage-gated hydrogen channel-like protein (AHRD V3.3 *** AT1G10800.2) Solyc09g098117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc09g098120.3 50 4 0 3 0 1 0 5 0 10 0 9 2 4 27 DUF1264 domain-containing protein (AHRD V3.3 *** A0A1Q3BQQ5_CEPFO) AT1G05510 Solyc09g098130.3 168 156 125 160 124 176 180 175 204 171 200 152 172 190 197 Spotted wilt resistance-5 Solyc09g098140.4 188 303 376 349 480 449 486 364 310 240 353 320 496 399 479 centrosomal protein (AHRD V3.3 *** AT1G79390.1) AT1G79390 Solyc09g098150.3 579 729 965 969 686 666 721 712 1195 982 946 811 1243 993 1260 metacaspase 1,Pfam:PF00656 AT1G79340 Solyc09g098160.3 6 41 44 27 150 75 100 125 66 31 42 27 0 13 22 pirin AT2G43120 Solyc09g098170.4 160 300 504 409 603 700 633 368 284 189 436 243 276 267 296 Ras-related protein RABA5b (AHRD V3.3 *** A0A2G3CR82_CAPCH) AT1G05810 Solyc09g098180.4 82 37 169 159 120 178 101 70 151 101 240 112 78 58 164 Pirin-like protein (AHRD V3.3 *** A0A2G3CR97_CAPCH) AT2G43120 Solyc09g098190.3 20 53 46 87 50 61 100 66 71 76 60 83 58 53 57 Signal peptide peptidase-like 5 (AHRD V3.3 *-* A0A2G2ZT65_CAPAN) Solyc09g098210.2 0 1 0 1 0 5 0 4 2 3 0 1 1 4 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN) Solyc09g098220.3 204 270 292 315 253 249 347 222 272 220 311 333 289 347 339 DNA polymerase zeta processivity subunit (AHRD V3.3 *** A0A2G3CRB0_CAPCH) AT1G16590 Solyc09g098230.3 1711 1655 1464 1395 1510 1512 1556 1639 1494 1636 1054 1668 2252 2233 1115 ATP-dependent DNA helicase 2 subunit KU70 (AHRD V3.3 *** A0A2G2W1W9_CAPBA) AT1G16970 Solyc09g098240.4 1711 2684 1812 1611 2010 1853 1950 2122 2028 1715 1256 1580 2712 2340 2016 Importin beta-like SAD2 (AHRD V3.3 *** A0A1U8GC41_CAPAN) AT2G31660 Solyc09g098260.3 534 854 704 709 886 946 997 993 1046 618 625 839 727 877 649 Histone-lysine N-methyltransferase (AHRD V3.3 *** A0A0D3H3X4_9ORYZ) AT1G05830 Solyc09g098270.4 6 9 13 16 14 9 9 8 12 9 20 5 2 10 67 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1QD15_ARTAN) AT1G23460 Solyc09g098280.3 1203 1513 1393 1154 1326 1011 1106 1257 1179 1060 997 1061 1723 1578 1069 Eukaryotic translation initiation factor 3 subunit H (AHRD V3.3 *** A0A200R8Q3_9MAGN) AT1G10840 Solyc09g098290.3 396 1247 705 979 1227 1159 976 1489 1348 1117 775 1024 1485 1192 862 Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** A0A061EKW3_THECC) AT3G28040 Solyc09g098300.3 1451 2613 3326 2493 2769 2341 2629 2669 2474 2722 3078 2359 3448 3055 2590 Unknown protein AT2G41420 Solyc09g098310.3 1730 1459 3343 1314 672 628 651 678 962 2259 2524 1131 2409 1674 1491 Unknown protein AT2G41420 Solyc09g098320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12-oxophytodienoate reductase-like protein (AHRD V3.3 *-* A0A2G2W8M9_CAPBA) Solyc09g098330.3 473 400 388 543 407 455 594 411 439 418 467 437 520 544 680 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** F4K6D8_ARATH) Solyc09g098340.3 692 475 479 363 277 303 275 317 363 581 631 368 572 464 309 aspartic proteinase-like protein 2 (AHRD V3.3 *** A0A2G2ZT59_CAPAN) AT1G05840 Solyc09g098350.4 41 74 95 56 121 99 120 94 69 69 121 85 81 59 32 F-box protein (AHRD V3.3 *** A0A1J3CDL8_NOCCA) AT1G30790 Solyc09g098360.4 7864 6104 6267 4292 5211 5699 4801 4116 4403 3688 5011 4420 6333 5318 5640 Unknown protein Solyc09g098370.4 531 546 443 567 472 577 637 437 496 334 496 375 504 569 485 Fanconi-associated nuclease (AHRD V3.3 *** A0A328DUX8_9ASTE) AT1G48360 Solyc09g098380.3 1 0 0 22 0 0 0 0 0 7 1 0 3 3 10 Amino acid transporter (AHRD V3.3 *** A0A200PYC4_9MAGN) AT5G16740 Solyc09g098385.1 11 2 8 0 6 1 0 1 2 6 0 0 1 6 2 Ubiquitin (AHRD V3.3 *** K2RZ76_MACPH) Solyc09g098390.3 430 410 449 332 372 459 466 375 382 335 457 320 521 540 483 U1 small nuclear ribonucleoprotein 70 kDa (AHRD V3.3 *** A0A2I0VCR8_9ASPA) AT2G43370 Solyc09g098400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 late embryogenesis abundant protein M17-like (AHRD V3.3 *** XP_010326917.1) Solyc09g098410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter G family member 19 (AHRD V3.3 *** A0A2G3CRC1_CAPCH) Solyc09g098420.3 93 248 442 203 473 531 472 779 262 296 234 654 79 354 85 Leucine-rich repeat receptor protein kinase MSP1 (AHRD V3.3 *** A0A2G2V6J8_CAPBA) Solyc09g098425.1 13 39 24 18 117 91 131 107 33 12 26 11 16 5 14 CRIB domain-containing protein RIC1 (AHRD V3.3 *** A0A2G3CR99_CAPCH) Solyc09g098440.4 113 172 157 199 196 195 220 193 141 114 146 194 188 202 155 V-type proton ATPase subunit e1 (AHRD V3.3 *** A0A1U8GDX0_CAPAN) Solyc09g098450.4 295 316 326 442 273 433 413 320 404 324 570 374 334 389 511 Lipase class 3 family protein (AHRD V3.3 *** A0A1P8AU29_ARATH) AT1G05790 Solyc09g098460.1 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 Phospholipase A1-Ialpha2, chloroplastic (AHRD V3.3 *** A0A2G3CRD2_CAPCH) AT1G05800 Solyc09g098470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3CSL7_CEPFO) AT4G10220 Solyc09g098480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *-* F4JJC7_ARATH) Solyc09g098490.4 97 283 333 449 531 618 502 506 290 234 404 467 203 341 293 clathrin interactor EPSIN 2-like (AHRD V3.3 *** A0A2I4ETK3_9ROSI) AT2G43160 Solyc09g098500.4 210 219 214 310 199 228 254 211 154 203 330 241 240 234 259 Got1/Sft2-like vescicle transport protein family (AHRD V3.3 *** Q8GWH4_ARATH) AT1G05785 Solyc09g098510.3 2079 906 1420 19753 200 93 221 125 709 3968 1633 101 632 1480 3322 Extensin-3 (AHRD V3.3 *-* A0A2G2ZT41_CAPAN) Solyc09g098520.4 336 640 405 529 737 729 758 753 684 614 418 595 584 667 574 CMP-sialic acid transporter 2 (AHRD V3.3 *** A0A2G2V6Q4_CAPBA) AT2G43240 Solyc09g098530.4 709 618 532 744 683 662 782 936 750 965 421 747 696 776 424 phosphoribosylformylglycinamidine synthase (AHRD V3.3 *** AT2G43235.1) AT2G43235 Solyc09g098540.3 4983 7368 8857 9786 7203 6701 6990 6774 10226 11512 12371 8416 8483 5330 11634 Chitinase-like protein (AHRD V3.3 *** Q6JX03_GOSHI) AT3G16920 Solyc09g098550.4 1479 1294 1229 1328 1070 1069 1169 926 1438 1008 1179 921 1719 1518 1748 plant UBX domain-containing protein 11 (AHRD V3.3 *** A0A2G2ZT53_CAPAN) AT2G43210 Solyc09g098560.2 273 318 295 261 349 296 307 328 309 208 279 324 349 325 332 Survival motor neuron containing protein (AHRD V3.3 *** B6TZU2_MAIZE) AT1G54380 Solyc09g098580.3 605 613 662 734 718 727 771 680 902 493 849 748 444 685 849 GTP pyrophosphokinase, (P)ppGpp synthetase II Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (AHRD V3.3 *** A0A2D1JZR2_9GAMM) AT4G02260 Solyc09g098590.4 1078 755 725 865 1092 1048 1141 1096 1228 1035 967 1309 552 1175 1607 Sucrose synthase (AHRD V3.3 *** E0Z1D1_SOLLC) AT4G02280 Solyc09g098600.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** B6T8I8_MAIZE) Solyc09g098601.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g098602.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g098603.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g098604.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g098605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g098606.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g098607.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc09g098608.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g004000.1 1099 844 896 985 767 996 1109 782 765 726 803 633 725 794 951 Dicer-like 1 protein (AHRD V3.3 *** H9N4C6_NICAT) Solyc10g005140.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 probably inactive receptor-like protein kinase At2g46850 (AHRD V3.3 *** A0A2I4ECD0_9ROSI) AT2G46850 Solyc10g005150.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Purine permease (AHRD V3.3 *** A0A2P5EE53_TREOI),Pfam:PF16913 AT1G30840 Solyc10g005160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Purine permease (AHRD V3.3 *** A0A2P5EE53_TREOI),Pfam:PF16913 AT1G30840 Solyc10g005170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Purine permease (AHRD V3.3 *** A0A2P5B756_PARAD),Pfam:PF16913 AT1G30840 Solyc10g005180.3 1009 1321 1462 1609 1409 1269 1443 1455 1296 1386 1070 1199 1139 1464 1499 Ycf3-interacting protein 1, chloroplastic (AHRD V3.3 *** Y3IP1_TOBAC) AT5G44650 Solyc10g005190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Root hair specific 4 (AHRD V3.3 *** Q9SY31_ARATH) AT4G20190 Solyc10g150100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g005200.3 190 402 272 359 262 275 235 278 396 340 294 319 400 193 374 galactan beta-1,4-galactosyltransferase GALS3 (AHRD V3.3 *** A0A2I4EYQ4_9ROSI) AT4G20170 Solyc10g005210.4 89 388 723 575 960 888 779 817 918 331 719 779 209 526 519 DNA-3-methyladenine glycosylase I (AHRD V3.3 *** B6TPB7_MAIZE) AT5G44680 Solyc10g005220.3 21 10 26 43 7 0 2 2 13 12 10 17 2 14 3 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B041_ARATH) AT4G20160 Solyc10g005230.3 507 847 1410 1242 1211 1354 1461 1137 948 693 1252 897 1072 991 1293 excitatory amino acid transporter (AHRD V3.3 *** AT4G20150.1) AT4G20150 Solyc10g005240.3 0 0 0 0 0 0 2 0 0 3 8 0 0 3 15 R2R3MYB transcription factor 67 AT3G12720 Solyc10g005250.3 1 8 7 3 17 13 17 7 9 15 15 19 0 5 8 AT hook motif-containing protein (AHRD V3.3 *-* A0A2K3PS21_TRIPR) AT5G52890 Solyc10g005260.3 10525 9527 6823 5779 5682 6006 5778 5287 5435 5613 5250 5615 7085 6896 7282 RNA-binding protein (AHRD V3.3 *** A0A2K3PBB6_TRIPR) AT1G11650 Solyc10g005270.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g005280.1 1112 1992 949 1156 1283 883 972 1345 1014 1437 775 1409 1925 1574 693 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3BDE4_CAPCH) AT1G61870 Solyc10g005290.4 211 354 357 380 374 452 504 303 326 355 266 463 335 356 322 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase/cardiolipin synthase (AHRD V3.3 *-* A0A2N0I349_9SPHN) AT4G04870 Solyc10g005300.3 14 5 4 7 0 0 1 1 2 4 13 0 2 2 2 Serine/threonine-protein kinase PBS1 (AHRD V3.3 *** A0A2G2VSF8_CAPBA) Solyc10g005310.3 406 482 427 437 425 450 448 393 398 525 442 438 549 405 463 Adenosine deaminase-like protein (AHRD V3.3 *** A0A2K3MU68_TRIPR) AT4G04880 Solyc10g005320.3 46 230 86 23 101 136 113 121 46 76 40 19 10 16 6 Tryptophan synthase beta chain (AHRD V3.3 *** B2J8R2_NOSP7) AT5G28237 Solyc10g005330.3 1951 1238 1161 1161 896 1067 947 943 1180 1022 969 1079 753 1118 656 Homeobox-leucine zipper protein MERISTEM L1 (AHRD V3.3 *** A0A1U8EDY4_CAPAN) AT4G21750 Solyc10g005335.1 56 45 36 48 61 26 46 48 61 52 6 57 24 34 42 Unknown protein Solyc10g005340.3 14 125 43 78 209 226 212 135 77 40 75 55 32 20 67 CRIB domain-containing protein RIC10 (AHRD V3.3 *** A0A2G2VSE7_CAPBA) AT4G04900 Solyc10g005350.3 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G3CKE5_CAPCH) AT1G11545 Solyc10g005360.4 113 63 104 46 1 0 0 1 15 41 30 31 11 40 82 Gibberellin 2-beta-dioxygenase 8 (AHRD V3.3 *** A0A2G2VSG0_CAPBA) AT4G21200 Solyc10g005370.3 1029 390 435 404 228 216 235 210 398 515 521 272 289 430 697 Pyruvate, phosphate dikinase regulatory protein, chloroplastic (AHRD V3.3 *** A0A2U1Q502_ARTAN) AT4G21210 Solyc10g005390.4 12 11 1 2 0 0 0 0 3 14 3 8 16 4 4 Linalool/nerolidol synthase (AHRD V3.3 *** G5CV39_SOLLC) AT1G61680 Solyc10g005400.3 2 31 2 37 56 33 43 14 10 9 3 17 7 4 3 Inositol oxygenase (AHRD V3.3 *** A0A2U1PDJ1_ARTAN) AT4G26260 Solyc10g005410.4 3 0 25 7 0 0 4 1 10 2 31 5 3 0 1 Terpene synthase (AHRD V3.3 *** G5CV41_SOLLC) AT1G61680 Solyc10g005420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene synthase (AHRD V3.3 *-* G5CV41_SOLLC) Solyc10g005430.4 17 6 7 8 1 2 4 8 9 5 8 4 5 5 1 Quinone reductase (AHRD V3.3 *** F8WQS4_NICBE) Solyc10g005440.3 4 12 9 5 7 10 6 10 5 7 5 12 5 16 6 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2VAE7_CAPBA) AT4G21390 Solyc10g005450.2 22 23 32 33 26 27 20 11 24 27 56 6 26 37 72 Equilibrative nucleotide transporter like (AHRD V3.3 *** A0A2R6QTM2_ACTCH) Solyc10g005460.3 257 40 13 38 5 4 10 0 8 98 94 11 10 37 81 MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR) Solyc10g005470.3 38 62 67 54 82 93 90 70 45 50 40 56 33 27 46 receptor-interacting protein (AHRD V3.3 *** AT4G21445.1) AT4G21445 Solyc10g005480.3 384 149 575 206 200 207 211 162 117 235 621 163 53 119 158 F-box family protein (AHRD V3.3 *** A0A2U1N101_ARTAN) AT4G21510 Solyc10g005485.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Unknown protein Solyc10g005490.4 1315 1648 1455 1543 1895 1931 2138 2296 1951 1643 1214 1652 1314 1612 1452 Protein strawberry notch (AHRD V3.3 *** A0A2G3BCB2_CAPCH) AT1G79350 Solyc10g005500.3 173 229 238 307 553 486 457 402 241 133 260 212 275 192 171 Metal tolerance protein 10 (AHRD V3.3 *** A0A2G2VR41_CAPBA) AT1G16310 Solyc10g005510.3 526 2242 1610 1476 2033 1741 1833 2329 1827 1536 950 1689 2759 2093 1074 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A2G3BCA8_CAPCH) AT1G79530 Solyc10g005520.3 249 408 279 287 366 390 384 381 369 346 145 332 389 329 248 RNA helicase DEAD30 AT1G16280 Solyc10g005530.3 2612 1936 1628 1490 1486 1403 1425 1556 1696 1903 1168 1747 1598 1607 1786 Nuclear cap-binding protein subunit 1 (AHRD V3.3 *** A0A2G2VR77_CAPBA) AT2G13540 Solyc10g005540.4 47 64 85 62 95 69 96 117 77 56 44 100 83 65 46 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1Q4L2_ARTAN) AT1G16445 Solyc10g005550.3 0 0 1 0 0 0 0 0 16 2 0 0 0 3 14 R2R3MYB transcription factor 63 AT1G16490 Solyc10g005560.3 1370 2672 2841 2157 3683 3074 2567 3403 3090 2040 2287 2601 3301 2893 2035 Ubiquitin family protein (AHRD V3.3 *** A0A1Y1IF26_KLENI) Solyc10g005580.3 1152 1500 1955 2134 2328 2367 2588 2419 1253 1777 1851 2103 943 1480 1540 interactor of constitutive active ROPs protein (AHRD V3.3 *** AT1G16520.1) AT1G16520 Solyc10g005590.4 9728 12268 9076 8857 10770 9406 10403 13290 7912 11918 7664 12247 11317 10372 6861 Serine/arginine-rich-splicing factor SR45 (AHRD V3.3 *-* A0A0M9UMR7_NICAT) AT1G16610 Solyc10g005600.4 354 270 334 341 273 325 335 232 216 177 322 225 263 352 354 BTB/POZ domain-containing protein 1 (AHRD V3.3 *-* S5ZYZ0_SOLTU) AT1G04390 Solyc10g005610.2 926 791 874 884 1058 980 1019 1110 724 1044 1042 1130 560 817 528 serine/arginine repetitive matrix-like protein (AHRD V3.3 *** AT1G56020.1) AT1G79060 Solyc10g005620.3 195 249 238 261 227 254 251 245 340 264 292 283 185 200 281 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A2U1PF28_ARTAN) AT1G56000 Solyc10g005630.3 1177 691 825 550 375 376 431 463 566 844 995 405 814 612 511 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1KM25_ARTAN) AT1G16670 Solyc10g005640.4 417 451 548 589 508 672 669 584 575 359 447 375 391 575 644 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1PF73_ARTAN) AT1G16220 Solyc10g005650.3 3232 2065 1754 1620 1777 1565 1598 1627 1944 2165 1538 1672 2310 2156 1909 Peroxisomal targeting signal 1 receptor (AHRD V3.3 *** Q9ZTK6_TOBAC) AT5G56290 Solyc10g005660.3 440 834 547 711 787 628 796 932 578 526 391 652 949 852 587 COP9 signalosome complex subunit 6a (AHRD V3.3 *** A0A1U8HM32_CAPAN) AT5G56280 Solyc10g005670.3 346 378 736 533 510 516 434 438 542 378 518 420 457 488 502 4-hydroxy-4-methyl-2-oxoglutarate aldolase (AHRD V3.3 *** A0A1U8EMA7_CAPAN) Solyc10g005680.2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 WRKY transcription factor 15 Solyc10g005690.3 129 267 362 345 371 380 456 372 369 294 456 293 305 248 393 Chloride channel protein (AHRD V3.3 *** A0A2G3BC88_CAPCH) AT1G55620 Solyc10g005700.3 892 1269 1357 1816 1562 1934 2019 1556 1497 1072 1301 1244 1427 1462 1360 hypothetical protein (AHRD V3.3 *** AT4G26450.2) AT4G26450 Solyc10g005710.2 0 0 0 0 1 3 1 3 1 0 0 1 0 0 0 Unknown protein Solyc10g005720.1 115 135 78 153 155 189 147 190 177 123 148 134 181 150 187 Unknown protein Solyc10g005730.3 2537 1553 1928 1695 1685 1774 1636 1525 1814 2024 2070 1525 1847 1861 1689 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** Q9C5N4_ARATH) AT3G13340 Solyc10g005740.3 16 31 40 108 78 117 108 81 43 27 61 76 28 60 43 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1LV34_ARTAN) AT1G55690 Solyc10g005750.3 113 116 137 223 172 190 159 171 114 108 147 107 150 165 178 Calcium-dependent protein kinase (AHRD V3.3 *-* B2KTA9_WHEAT) AT4G26470 Solyc10g005760.3 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 R2R3MYB transcription factor 80 AT5G56110 Solyc10g005770.4 1690 1449 1817 1757 1713 1788 1706 1691 1792 1498 1943 1795 1283 1503 1503 Protein kinase G11A (AHRD V3.3 *** A0A2G3BC70_CAPCH) Solyc10g005780.3 344 508 604 597 624 581 648 541 454 369 501 500 709 618 579 ER membrane protein complex subunit 8/9-like protein (AHRD V3.3 *** A0A1U8HGZ8_CAPAN) AT5G55940 Solyc10g005790.3 149 240 322 359 382 402 375 361 376 336 300 431 268 303 244 Transmembrane protein C9orf5 protein (AHRD V3.3 *** Q93XX1_ARATH) AT5G55960 Solyc10g005800.3 3057 2344 2332 1770 2038 1937 1758 1874 2229 1740 2610 1812 2422 2163 2860 Cwf15 / Cwc15 cell cycle control family protein (AHRD V3.3 *** Q9LK52_ARATH) AT3G13200 Solyc10g005820.3 25 78 101 124 134 129 154 151 133 80 91 96 123 102 128 Farnesyl pyrophosphate synthase 2 Solyc10g005830.3 675 608 427 556 805 583 610 683 519 567 377 602 601 574 436 Ureidoglycolate hydrolase (AHRD V3.3 *** A0A1P8B223_ARATH) AT2G35820 Solyc10g005840.4 526 308 500 463 347 459 427 278 323 249 491 255 274 420 728 Farnesyl pyrophosphate synthase (AHRD V3.3 *** S4S9J9_MANIN) Solyc10g005850.4 2068 1558 1497 1524 1162 1277 1228 1070 1159 1204 1016 1106 1493 1851 1382 WW domain-containing protein (AHRD V3.3 *-* A0A1Q3AV91_CEPFO) AT3G13225 Solyc10g005860.3 31 33 10 29 31 29 21 27 35 28 24 31 22 25 19 WW domain-containing protein (AHRD V3.3 --* A0A2K3NUJ7_TRIPR) Solyc10g005870.4 46 67 98 85 114 92 118 98 83 54 34 84 60 97 113 Peptidylprolyl isomerase (AHRD V3.3 *** A0A1U8EF45_CAPAN) AT4G26555 Solyc10g005880.3 1154 435 385 436 138 171 207 159 283 259 180 111 324 466 543 Uridine kinase (AHRD V3.3 *** A0A2G2Z615_CAPAN) AT1G55810 Solyc10g005890.3 634 867 764 589 775 643 656 853 909 756 525 675 1085 907 625 DNA damage-inducible protein 1 (AHRD V3.3 *** A0A2U1PNF1_ARTAN) AT3G13235 Solyc10g005900.3 819 830 669 668 721 735 830 785 705 632 541 695 853 716 684 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) (AHRD V3.3 *** A0A1I9LP36_ARATH) AT1G55750 Solyc10g005905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g005910.2 338 346 297 267 341 432 386 387 301 271 252 276 284 319 236 GTPase Der (AHRD V3.3 *** A0A1J3HSR7_NOCCA) AT5G39960 Solyc10g005920.4 1655 1874 1114 1641 1848 1750 1667 2172 1725 1751 1178 1492 1561 1724 1622 enhancer of mRNA-decapping protein 4-like (AHRD V3.3 *** A0A2I4F2H1_9ROSI) AT3G13290 Solyc10g005930.2 604 640 396 468 472 408 393 425 469 487 359 484 544 454 583 Histidine biosynthesis bifunctional protein hisIE (AHRD V3.3 *** B6TR63_MAIZE) AT1G31860 Solyc10g005940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Early nodulin-like protein 1 (AHRD V3.3 *** A0A2I0VSH8_9ASPA) Solyc10g005950.3 200 143 267 213 163 157 178 156 148 207 141 125 171 114 94 Nudix hydrolase 8 (AHRD V3.3 *** A0A2G2VRA0_CAPBA) Solyc10g005960.1 780 3173 2264 2307 3187 2646 2623 3407 3370 1933 1750 2490 2340 1970 1299 Fasciclin-like arabinogalactan protein (AHRD V3.3 *** A0A2R6P548_ACTCH) AT5G55730 Solyc10g005970.1 0 1 11 5 5 10 6 4 2 1 16 0 0 0 1 Unknown protein Solyc10g005980.1 0 3 2 20 17 13 9 17 11 1 0 4 5 2 0 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* Q9FM71_ARATH) Solyc10g005990.4 1667 1176 871 851 870 961 811 883 919 1065 765 965 1094 949 995 Septin and tuftelin-interacting protein 1-like protein 1 (AHRD V3.3 *** A0A2G2VR98_CAPBA) AT1G17070 Solyc10g006000.4 64 424 555 505 936 1178 1012 853 525 201 764 665 239 319 402 DEK (AHRD V3.3 *-* A0A200RBP9_9MAGN) Solyc10g006010.3 105 216 281 295 386 311 323 320 257 189 310 205 193 218 206 Two pore potassium channel a (AHRD V3.3 *** A0A2G2VRA3_CAPBA) AT5G55630 Solyc10g006020.3 447 801 510 464 570 598 583 629 506 447 433 471 967 718 524 Mitochondrial import inner membrane translocase subunit TIM50 (AHRD V3.3 *** A0A1U8EN68_CAPAN) AT1G55900 Solyc10g006030.3 1257 2511 2422 2258 3076 2522 2585 2804 2076 1856 2205 2188 1734 2466 1907 30S ribosomal protein S10, chloroplastic (AHRD V3.3 *** A0A2G2VQX8_CAPBA) AT3G13120 Solyc10g006040.1 241 388 272 481 455 448 348 569 338 475 189 298 319 366 263 Serine acetyltransferase (AHRD V3.3 *** A0A2K3M2Y7_TRIPR) AT3G13110 Solyc10g006050.3 322 326 395 436 297 336 343 320 308 269 297 214 387 416 476 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4JFN7_ARATH) Solyc10g006070.3 4772 6578 6533 4332 5233 5098 4770 4822 4469 3672 4989 4296 7836 6624 6277 40S ribosomal protein S8 (AHRD V3.3 *-* A0A2G2YIY9_CAPAN) Solyc10g006080.3 0 1 13 0 0 0 5 1 1 3 0 2 2 0 0 Sodium/hydrogen exchanger (AHRD V3.3 *** A0A328CZZ7_9ASTE) AT5G55470 Solyc10g006090.4 2260 1696 1478 1632 1403 1598 1723 1321 1623 1382 1338 1442 1367 1749 1582 Protein ENHANCED DOWNY MILDEW 2 (AHRD V3.3 *** A0A2G2YIJ3_CAPAN) AT5G55390 Solyc10g006095.1 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 Unknown protein Solyc10g006100.3 570 667 507 520 611 689 630 608 545 520 370 607 524 600 479 Transcription initiation factor TFIID subunit 6 (AHRD V3.3 *** A0A2G2YIM3_CAPAN) AT1G04950 Solyc10g006110.3 0 1 0 0 0 4 1 1 0 0 0 8 0 0 0 EH domain-containing protein 1 (AHRD V3.3 *** A0A2G3BC74_CAPCH) AT3G20290 Solyc10g006120.2 29 18 21 25 7 15 8 7 4 34 31 10 23 21 53 DUF3537 domain-containing protein (AHRD V3.3 *** A0A1Q3D045_CEPFO) AT3G20300 Solyc10g006130.1 1711 1364 1769 577 516 400 418 427 576 679 3516 1237 1056 721 1861 EAR motif SlERF36 AT1G50640 Solyc10g006140.3 1330 1003 1334 1188 1050 1048 1057 986 943 1584 1312 1267 810 754 1147 Acid phosphatase/vanadium-dependent haloperoxidase-related protein (AHRD V3.3 *** Q8L7M6_ARATH) AT3G21610 Solyc10g006150.3 70 43 25 19 0 0 1 1 21 33 97 0 43 12 5 DUF761 domain-containing protein/DUF4408 domain-containing protein (AHRD V3.3 *** A0A1Q3CP02_CEPFO) Solyc10g006160.1 12 15 9 8 9 7 7 6 4 8 5 16 7 8 0 Unknown protein Solyc10g006170.4 777 469 401 576 350 464 490 301 356 482 445 383 375 488 602 Cell differentiation protein RCD1-like protein (AHRD V3.3 *** A0A2G3CUT5_CAPCH),Pfam:PF04078 Solyc10g006173.1 77 40 16 31 15 19 18 25 21 31 38 26 7 32 45 Cell differentiation protein RCD1-like protein (AHRD V3.3 *-* A0A1J3G0M4_NOCCA) Solyc10g006177.1 88 49 51 18 15 21 16 36 37 65 31 37 26 48 51 Unknown protein Solyc10g006190.4 749 411 319 385 193 273 275 145 196 207 300 247 256 390 533 Cell differentiation protein RCD1-like protein (AHRD V3.3 *** A0A2G3CUT5_CAPCH),Pfam:PF04078 Solyc10g006200.4 277 116 84 84 73 36 88 52 93 68 70 62 72 106 114 Ribonuclease 3-like protein 2 (AHRD V3.3 *** A0A2G3BC36_CAPCH) Solyc10g006210.3 226 113 81 85 57 50 96 93 113 100 96 69 99 115 87 Ribonuclease 3-like protein 2 (AHRD V3.3 *-* A0A2G3BC36_CAPCH) Solyc10g006220.4 447 290 219 261 227 226 287 230 213 259 162 260 307 312 275 Cell differentiation protein RCD1-like protein (AHRD V3.3 *-* A0A1J3G0M4_NOCCA) Solyc10g006230.3 4923 8887 4358 6301 15384 12859 13247 14743 10083 8876 4327 8238 6145 3624 4655 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3BCB0_CAPCH) AT3G61470 Solyc10g006240.3 956 615 407 547 494 570 495 404 458 440 433 413 415 440 689 Pyridoxal phosphate homeostasis protein (AHRD V3.3 *** A0A2G2VR44_CAPBA) AT4G26860 Solyc10g006250.3 1015 572 264 318 340 305 254 331 441 616 386 407 321 474 364 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (AHRD V3.3 *-* Q94BN8_ARATH) Solyc10g006260.3 5939 2495 2728 2040 1419 1843 1800 1346 2146 1871 3256 1759 1723 2716 4150 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (AHRD V3.3 *-* A0A2U1QC92_ARTAN) AT5G55100 Solyc10g006270.4 1224 502 480 665 438 463 461 504 528 906 670 554 667 635 855 Autophagy-related protein (AHRD V3.3 *** A0A2G3C2V6_CAPCH) Solyc10g006275.1 13 5 24 21 66 52 48 32 12 6 12 6 31 16 39 senescence regulator (Protein of unknown function%2C DUF584) (AHRD V3.3 *** AT4G04630.1) AT4G04630 Solyc10g006280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein translation factor SUI1-like protein (AHRD V3.3 *** A0A1U8FM10_CAPAN) Solyc10g006290.3 908 1807 2030 1863 1863 2021 2235 1646 1631 1028 1703 1588 2164 1932 1915 constitutive plastid-lipid associated protein AT3G20390 Solyc10g006300.4 429 316 299 311 197 188 160 203 280 450 271 328 385 376 240 Purple acid phosphatase (AHRD V3.3 *** A0A2G2YIL1_CAPAN) AT3G20500 Solyc10g006310.3 116 109 168 142 119 130 120 112 123 146 150 114 168 149 184 Protein FATTY ACID EXPORT 6 (AHRD V3.3 *** A0A1U8EPM9_CAPAN) AT1G50740 Solyc10g006320.3 361 301 269 269 269 248 257 235 239 275 347 200 306 282 297 Vacuolar protein sorting-associated protein (AHRD V3.3 *** A0A2G2VR43_CAPBA),Pfam:PF04157 AT4G27040 Solyc10g006330.3 555 758 189 364 534 553 539 646 574 535 309 282 386 133 278 protein PLASTID MOVEMENT IMPAIRED 1 (AHRD V3.3 *** A0A2I4GWL2_9ROSI) AT1G42550 Solyc10g006340.3 0 0 6 0 0 0 0 1 0 1 0 0 0 0 7 Serine/threonine-protein kinase PBS1 (AHRD V3.3 *** A0A2G2VR32_CAPBA) AT3G20530 Solyc10g006350.3 389 760 778 831 975 902 907 1065 785 766 558 846 666 814 560 CONSTANS interacting protein 7 AT4G27060 Solyc10g006360.2 84 101 147 105 147 186 176 130 96 71 142 120 105 124 111 hexon (AHRD V3.3 *** AT5G54850.1) AT5G54850 Solyc10g006370.3 248 475 627 456 598 692 708 610 574 331 481 427 488 599 592 Protein LHCP TRANSLOCATION DEFECT (AHRD V3.3 *** A0A1U8ENV2_CAPAN) AT1G50900 Solyc10g006380.3 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Ras-related small GTP-binding family protein (AHRD V3.3 *** A0A2U1P8S5_ARTAN) Solyc10g006390.3 2857 2911 2393 2402 2291 2429 2504 2565 2474 2352 2172 2668 2759 2987 2662 Smad nuclear-interacting protein 1 (AHRD V3.3 *** A0A2G2YIQ3_CAPAN) AT3G20550 Solyc10g006400.3 417 913 671 837 1063 850 945 1182 1090 866 693 1041 923 845 688 Tryptophan synthase beta chain (AHRD V3.3 *** B2J8R2_NOSP7) AT5G54810 Solyc10g006410.3 386 374 361 410 270 300 356 391 417 369 408 392 385 463 370 AP-5 complex subunit zeta-1 (AHRD V3.3 *** A0A2I4DV50_9ROSI) AT3G15160 Solyc10g006420.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HDG2-like (AHRD V3.3 *** A0A2K3P3R2_TRIPR) Solyc10g006430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 --* AT3G21710.2) Solyc10g006440.3 13 26 22 33 75 85 93 97 13 35 27 30 7 23 17 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** F4JIR5_ARATH) AT5G54780 Solyc10g006450.3 2 4 2 11 23 19 34 13 6 4 9 5 19 5 3 COBRA-like protein 10 (AHRD V3.3 *** A0A2G3ATH9_CAPCH) AT3G20580 Solyc10g006460.3 1338 905 885 556 600 584 479 619 962 811 834 796 905 918 1173 DDRGK domain-containing protein 1 (AHRD V3.3 *** A0A2G2XZV3_CAPAN) AT4G27120 Solyc10g006470.3 4015 3534 4561 4374 4060 3521 3575 3037 3360 3320 3995 2969 4654 4442 4456 Protein translation factor SUI1-like protein (AHRD V3.3 *** A0A1U8EP95_CAPAN) Solyc10g006480.2 7710 5122 3519 5172 3419 2863 2709 3649 5338 5796 5065 5055 8031 5837 6114 Polyubiquitin (AHRD V3.3 *** F1SY21_MESCR) AT4G05320 Solyc10g006490.3 620 705 1149 1062 1184 985 1158 930 747 753 1045 883 826 815 935 Trafficking protein particle complex subunit (AHRD V3.3 *** A0A2G3ATJ4_CAPCH) AT5G54750 Solyc10g006500.4 2 37 6 53 4 3 26 16 15 18 55 4 2 32 161 Hexosyltransferase (AHRD V3.3 *** A0A2G3ATI8_CAPCH) AT5G54690 Solyc10g006510.3 228 168 198 223 182 170 176 195 229 272 215 202 345 219 257 bHLH transcription factor152 AT5G54680 Solyc10g006520.3 227 174 326 317 301 335 325 351 243 303 273 240 274 231 238 Thioredoxin domain-containing protein (AHRD V3.3 *** A0A1Q3BMD7_CEPFO) AT5G06430 Solyc10g006530.4 11 76 109 75 144 162 135 110 110 47 176 80 61 70 92 Photosynthetic NDH subcomplex L 3 (AHRD V3.3 *-* A0A0F7CYJ0_9ROSI) Solyc10g006540.4 1565 1390 1752 1729 987 1045 1210 1335 1488 2027 1406 1251 1255 1441 947 Formin-like protein (AHRD V3.3 *-* A0A2G2VQZ9_CAPBA) AT5G54650 Solyc10g006550.3 12 25 17 29 38 43 82 49 35 24 20 28 12 44 3 protein FLOWERING LOCUS D-like (AHRD V3.3 *-* A0A2I4H638_9ROSI) Solyc10g006560.4 697 1960 1580 1512 2515 2059 1976 2401 1292 1023 1403 1865 1245 1686 857 Histone H2A (AHRD V3.3 *** A0A218X7P1_PUNGR) AT1G51060 Solyc10g006570.2 1 0 9 1 8 1 1 3 1 3 0 0 8 4 18 50S ribosomal protein L24, chloroplastic (AHRD V3.3 *-* A0A2G3C2Y9_CAPCH) Solyc10g006600.4 349 121 167 178 83 136 144 106 137 140 222 125 164 177 307 Gluconokinase (AHRD V3.3 *** A0A2G2XZF6_CAPAN) AT2G16790 Solyc10g006580.3 4182 7095 5747 4114 5720 5048 5262 5952 3760 3286 3728 4752 7454 6136 4518 ribosomal protein L2 AT4G36130 Solyc10g006590.3 5 18 5 23 2 12 1 3 0 4 8 6 3 1 0 DUF538 family protein (AHRD V3.3 *** B4FJ34_MAIZE) AT5G54530 Solyc10g006610.4 2 24 4 7 51 45 70 44 6 12 0 3 16 8 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1LNK3_ARTAN) Solyc10g006615.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GH3 family (AHRD V3.3 *-* A0A2U1LHS1_ARTAN) Solyc10g006630.3 0 2 0 4 2 1 9 0 0 0 0 0 0 0 0 GH3 family (AHRD V3.3 *-* A0A2U1LHS1_ARTAN) Solyc10g006640.3 52 94 92 233 93 80 120 70 84 90 75 78 88 96 136 bHLH transcription factor153 Solyc10g006650.3 221 204 228 188 173 166 178 220 260 227 212 207 283 147 240 Quinone reductase (AHRD V3.3 *** F8WQS4_NICBE) AT4G27270 Solyc10g006660.3 452 219 444 111 78 75 54 35 68 105 876 211 241 217 549 Calcium-binding protein PBP1 (AHRD V3.3 *** A0A1U8EDM6_CAPAN) AT4G27280 Solyc10g006680.2 8 6 17 7 0 3 4 4 6 2 1 3 7 13 6 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G2XZF1_CAPAN) Solyc10g006690.4 12 11 19 5 0 0 3 4 3 15 9 6 9 11 6 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2XZF1_CAPAN) Solyc10g006700.1 470 178 394 57 37 22 25 11 26 39 1122 263 184 110 580 Calcium-binding protein PBP1 (AHRD V3.3 *** A0A1U8EDM6_CAPAN) AT4G27280 Solyc10g006710.4 98 65 92 153 39 51 83 50 142 95 171 72 115 150 218 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2VQY2_CAPBA) Solyc10g006720.4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3C305_CAPCH) AT4G27290 Solyc10g006730.1 129 162 105 113 158 178 172 157 135 108 178 157 131 149 157 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8EMW9_CAPAN) AT4G22760 Solyc10g006740.4 9 31 33 35 29 30 29 13 10 18 57 20 16 13 6 Calcium-binding protein PBP1 (AHRD V3.3 *** A0A2G2XZK3_CAPAN) Solyc10g006750.4 4 1 0 1 16 8 8 6 3 6 5 8 4 6 17 Unknown protein Solyc10g006760.3 3554 3166 2007 2422 2877 2088 1878 3463 2519 3862 1850 3277 3402 2823 1301 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A1P8BH78_ARATH) Solyc10g006770.4 4225 1649 943 845 826 897 842 896 1342 1403 1041 1272 1113 1243 1183 FACT complex subunit SPT16 (AHRD V3.3 *-* A0A2G2V392_CAPBA) Solyc10g006780.4 2724 1734 1869 2451 1437 1725 2116 1474 1568 1624 1688 1606 1578 1895 2362 Telomere length regulation protein TEL2-like protein (AHRD V3.3 *** A0A1J3CX06_NOCCA) AT3G48470 Solyc10g006790.4 432 616 449 447 443 533 537 488 538 389 437 432 637 675 424 Protein kinase superfamily protein (AHRD V3.3 *** F4I8V6_ARATH) Solyc10g006800.4 378 230 443 473 540 533 687 470 425 422 319 295 687 586 310 Cyclic nucleotide-gated ion channel 4 (AHRD V3.3 *** A0A2G2V344_CAPBA) Solyc10g006810.4 32 110 72 80 141 156 138 155 96 76 80 115 94 106 37 Unknown protein Solyc10g006820.4 547 674 553 453 686 701 702 687 592 388 539 517 635 576 724 Myosin-2 (AHRD V3.3 *** A0A2G2V352_CAPBA) AT5G54280 Solyc10g006830.4 137 100 77 52 70 43 76 61 67 87 29 56 113 112 75 B3 domain-containing protein (AHRD V3.3 *-* A0A2G3C312_CAPCH) Solyc10g006840.4 132 92 169 118 93 105 122 52 66 53 123 82 111 103 210 Unknown protein Solyc10g006850.4 34 101 50 83 46 62 76 56 91 46 60 51 113 98 70 Arf GTPase activating protein (AHRD V3.3 *** A0A200RBV9_9MAGN) AT5G54310 Solyc10g006860.4 160 155 68 164 225 217 197 143 127 117 87 73 206 92 185 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IPI3_ARATH) Solyc10g006870.1 59 172 462 197 223 268 294 196 365 238 399 188 69 105 152 Receptor-like protein kinase THESEUS 1 (AHRD V3.3 *** A0A1U8HD02_CAPAN) AT5G54380 Solyc10g006880.3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 17 NAC domain protein AT3G15510 Solyc10g006890.4 759 767 1075 838 801 1031 1023 733 855 804 1031 805 570 749 1290 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PNI0_ARTAN) AT3G15470 Solyc10g006900.3 873 1659 1114 1322 1907 1511 1712 1561 2046 1521 962 1911 1131 1405 1264 light dependent NADH:protochlorophyllide oxidoreductase 3 s2 AT4G27440 Solyc10g006910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L16, chloroplastic (AHRD V3.3 *** J7H6Z8_CAPAN) Solyc10g006920.3 72 170 84 211 138 113 174 81 108 103 90 138 359 519 223 CBS domain (AHRD V3.3 *** A0A200QRX2_9MAGN) AT5G53750 Solyc10g006930.4 1014 1237 1214 1392 1753 1646 1707 1799 1514 1478 1077 1357 1342 1217 1073 Plant intracellular Ras-group-related LRR protein (AHRD V3.3 *** A0A2R6QK70_ACTCH) AT3G15410 Solyc10g006940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g006950.1 130 113 72 80 37 141 95 79 89 92 162 89 100 119 87 Unknown protein Solyc10g006960.3 87 126 55 164 179 168 203 218 143 126 122 182 131 193 128 E3 ubiquitin-protein ligase rma1h1-like protein (AHRD V3.3 *** A0A2K3P2S4_TRIPR) Solyc10g006970.3 280 228 269 312 201 268 297 226 278 291 247 241 190 229 266 Thioredoxin (AHRD V3.3 *** A0A200PQX5_9MAGN) AT3G15360 Solyc10g006980.3 346 449 406 460 418 459 432 434 524 405 385 384 462 376 381 3-deoxy-manno-octulosonate cytidylyltransferase (AHRD V3.3 *** KDSB_MAIZE) AT1G53000 Solyc10g006990.3 1373 1010 929 799 705 774 835 745 778 935 843 711 1174 1235 832 non-canonical poly(A) RNA polymerase PAPD5 (AHRD V3.3 *** A0A2I4H2M3_9ROSI) AT5G53770 Solyc10g007000.3 299 232 268 208 300 250 198 223 203 261 174 213 302 284 200 Ubiquitin-conjugating enzyme family protein (AHRD V3.3 *-* A0A178W4Y0_ARATH) AT1G53025 Solyc10g007010.1 62 85 128 56 57 65 72 63 59 65 94 58 101 64 106 Cytochrome c oxidase copper chaperone (AHRD V3.3 *** A0A1U8H381_CAPAN) AT3G15352 Solyc10g007020.1 16 16 39 9 20 11 12 11 27 13 18 12 24 25 11 Unknown protein Solyc10g007030.2 123 57 93 85 93 105 112 78 89 112 73 95 84 80 104 Transmembrane protein (AHRD V3.3 *** A0A1P8API0_ARATH) AT1G53035 Solyc10g007040.3 0 2 2 3 21 10 5 5 2 2 8 13 5 13 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2U1M9T8_ARTAN) Solyc10g007050.3 179 139 149 226 334 327 330 258 185 143 304 152 117 145 200 Enolase-phosphatase E1 (AHRD V3.3 *** U2LNY1_SERFO) Solyc10g007060.4 592 895 746 742 973 1008 893 1116 751 617 457 740 812 742 507 Phenylalanine--tRNA ligase alpha subunit (AHRD V3.3 *** A0A2G2XXC1_CAPAN) AT4G39280 Solyc10g007070.4 1501 535 400 565 92 78 42 41 192 581 683 184 627 767 2018 Early nodulin-like protein 1 (AHRD V3.3 *-* A0A2G3BCD1_CAPCH) Solyc10g007073.1 25 19 37 35 19 38 28 24 12 31 39 27 3 33 30 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4H3J9_9ROSI) AT3G23550 Solyc10g007075.1 0 0 1 2 0 0 0 0 0 0 0 2 0 0 0 Homeobox-leucine zipper protein HOX6 (AHRD V3.3 *** A0A2G2YIM8_CAPAN) AT5G53980 Solyc10g007077.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *-* A0A2I4H3J9_9ROSI) Solyc10g007100.3 23 21 38 24 4 9 6 3 32 45 94 19 8 14 2 Protein DETOXIFICATION (AHRD V3.3 *** A0A218WWW8_PUNGR) AT3G23550 Solyc10g150101.1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 Homeobox-leucine zipper protein HOX6 (AHRD V3.3 *** A0A2G2YIM8_CAPAN) AT5G53980 Solyc10g150102.1 13 9 5 15 6 17 12 9 57 47 51 38 11 29 18 Nucleic acid-binding, OB-fold protein (AHRD V3.3 *-* A0A2U1LWI4_ARTAN) Solyc10g007110.3 234 352 189 405 414 492 425 419 360 410 116 335 191 122 107 Tyrosine aminotransferase (AHRD V3.3 *** A0A1U8EFD5_CAPAN) AT5G53970 Solyc10g007120.4 396 601 531 697 643 504 648 645 692 615 411 792 525 653 568 transmembrane protein (AHRD V3.3 *** AT3G15110.1) AT3G15110 Solyc10g007130.4 4748 2755 2412 2450 1964 2279 1990 2250 2446 2967 2782 2627 2556 2691 2716 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like (AHRD V3.3 *** A0A2I4H1W3_9ROSI) AT3G18380 Solyc10g007140.3 1707 1165 882 1087 1281 1047 1114 1396 1184 2016 872 1444 1164 1182 793 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L356_ARTAN) AT1G53190 Solyc10g007150.4 14740 5592 3430 3678 2549 2483 2182 2748 3553 3981 2962 3539 3607 3618 3404 Apoptosis inhibitory 5 (AHRD V3.3 *** A0A200QVJ7_9MAGN) Solyc10g007156.2 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 Plant transcription factor NOZZLE (AHRD V3.3 *** A0A103XLZ7_CYNCS) Solyc10g007160.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor GTE4-like (AHRD V3.3 *-* XP_022985931.1) Solyc10g007170.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor GTE4-like (AHRD V3.3 *-* A0A1U7YX65_NICSY) Solyc10g007180.2 3191 3237 2991 2523 2666 2255 2436 3035 3225 2501 2665 3076 5189 3669 2928 Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial (AHRD V3.3 *-* A0A2G3BCH1_CAPCH) AT3G15000 Solyc10g007190.2 409 275 291 314 310 333 350 270 309 342 344 300 286 326 366 Zinc finger BED domain-containing protein DAYSLEEPER (AHRD V3.3 *-* A0A1J3EGJ5_NOCCA) Solyc10g007200.3 87 211 198 230 284 311 258 250 248 181 234 297 196 198 268 Hexosyltransferase (AHRD V3.3 *** A0A2G3BCF8_CAPCH) AT1G53290 Solyc10g007210.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Hcr9-4A (AHRD V3.3 *-* O50028_SOLHA) Solyc10g007220.3 0 0 0 12 39 14 32 33 7 1 7 6 0 1 0 TPR repeat-containing thioredoxin TTL1 (AHRD V3.3 *** A0A2G2Z4X4_CAPAN) Solyc10g007230.2 1 0 0 0 2 0 1 0 1 2 0 0 0 0 0 TPR repeat-containing thioredoxin TTL1 (AHRD V3.3 *** A0A2G2Z4X4_CAPAN) Solyc10g007240.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TPR repeat-containing thioredoxin TTL1 (AHRD V3.3 *** A0A2G3BCE4_CAPCH) Solyc10g007250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TPR repeat-containing thioredoxin TTL1 (AHRD V3.3 *-* A0A2G2Z4X4_CAPAN) Solyc10g007260.3 1059 1790 2113 1666 2467 2669 2457 2529 1815 1608 1918 1852 2357 1903 1708 Ubiquitin-conjugating enzyme (AHRD V3.3 *** H6VUT0_9FABA) AT1G78870 Solyc10g007270.4 0 20 42 6 0 2 15 14 2 22 36 0 3 11 0 Pollen allergen Ole e 1 family (AHRD V3.3 *** A0A2U1LWI3_ARTAN) AT5G45880 Solyc10g007280.4 625 280 382 101 10 12 7 7 120 490 1295 70 1338 456 228 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NGY3_ARTAN) Solyc10g007290.4 831 2036 1809 2344 2895 2415 2585 3396 3143 2282 2162 2100 2639 2632 2016 phosphoenolpyruvate carboxylase (AHRD V3.3 *** A0A1S3YLC5_TOBAC) AT3G14940 Solyc10g007300.2 48 42 22 25 31 35 36 36 37 36 34 28 15 27 21 Unknown protein Solyc10g007310.1 365 298 555 507 122 128 108 49 152 279 439 100 364 356 865 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 (AHRD V3.3 *** A0A2G3BCH5_CAPCH) Solyc10g007320.3 269 797 608 651 742 695 762 897 804 571 559 642 468 710 585 Uroporphyrinogen decarboxylase (AHRD V3.3 *** A0A1U8EDS3_CAPAN) AT3G14930 Solyc10g007330.1 344 620 458 623 1021 802 677 1149 596 803 426 755 411 708 349 peptide:N-glycanase AT3G14920 Solyc10g007340.3 2299 1491 1001 1077 956 785 787 1263 999 1764 844 1263 1322 1364 1166 hypothetical protein (AHRD V3.3 *-* AT1G78810.3) AT1G78810 Solyc10g007350.4 1172 1523 1832 1429 1543 1431 1620 1422 1668 983 1662 1345 2148 1904 1672 Multiprotein bridging factor 1 (AHRD V3.3 *** S4T643_CAPAN) AT3G58680 Solyc10g007360.4 40 28 43 38 27 16 22 27 21 22 1 21 40 59 35 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4H3J9_9ROSI) AT3G23550 Solyc10g007370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A1Q3BWY6_CEPFO) AT3G23550 Solyc10g007380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *** A0A1Q3BWY6_CEPFO) AT3G23550 Solyc10g007390.3 2479 2572 1745 1569 1876 1737 1651 2044 1738 2189 1639 1853 2740 2258 1924 Protein transport protein Sec61 subunit alpha (AHRD V3.3 *** A0A1U8ED90_CAPAN) AT2G34250 Solyc10g007400.4 94 410 505 373 610 701 668 651 459 251 394 415 353 552 173 DNA polymerase delta subunit 3 (AHRD V3.3 *** A0A1J3DS75_NOCCA) AT1G78650 Solyc10g007410.4 760 434 530 506 542 482 491 506 524 538 520 420 569 517 464 Gamma-glutamyl hydrolase (AHRD V3.3 *** B2Z9Y5_SOLLC) AT1G78680 Solyc10g007420.4 2 23 21 8 41 46 65 46 14 16 27 16 21 31 16 TPR repeat-containing thioredoxin TTL2 (AHRD V3.3 *** A0A2G2VCL7_CAPBA) Solyc10g007430.3 0 0 4 0 0 2 9 1 0 2 0 0 0 0 0 TPR repeat-containing thioredoxin TTL1 (AHRD V3.3 *-* A0A2G2Z4X4_CAPAN) Solyc10g007440.3 146 202 217 157 163 177 195 148 190 120 123 171 217 233 174 Zinc finger protein (AHRD V3.3 *-* A0A200PU12_9MAGN) AT1G53460 Solyc10g007450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein trichome birefringence-like 42 (AHRD V3.3 *** A0A2G2VRF9_CAPBA) AT1G78710 Solyc10g007460.4 214 161 153 149 104 172 154 104 109 156 185 142 167 183 187 Zinc finger protein (AHRD V3.3 *-* A0A200PME8_9MAGN) AT1G53460 Solyc10g007470.4 682 652 568 610 708 735 636 872 763 863 481 705 644 639 511 zinc finger BED domain-containing protein RICESLEEPER 1-like (AHRD V3.3 *** A0A2I4E182_9ROSI) Solyc10g007480.4 1920 2554 2387 2445 2760 2668 2602 3119 3198 2863 2649 2827 2231 2170 2473 trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (AHRD V3.3 *** A0A2I4GY66_9ROSI) AT1G78570 Solyc10g007490.2 2 8 6 3 1 0 3 3 5 5 2 2 2 0 0 transmembrane protein (AHRD V3.3 *** AT3G14760.1) AT3G14760 Solyc10g007500.4 4856 2689 3219 3947 3071 3645 4005 2817 2650 3522 4492 2676 2099 2480 4338 mitogen-activated protein kinase 10 AT3G14720 Solyc10g007510.2 2 13 23 36 61 32 35 30 17 4 13 22 0 11 4 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *** F4IA92_ARATH) AT1G78520 Solyc10g007520.3 36 49 34 60 79 68 74 59 69 40 39 43 79 69 64 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1NDF9_ARTAN) AT3G14580 Solyc10g007530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminopeptidase (DUF3754) (AHRD V3.3 *** Q8RWC3_ARATH) Solyc10g007540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 glycine-rich cell wall structural protein 1.0-like (AHRD V3.3 -** XP_010324450.1) Solyc10g007550.3 968 1192 877 793 1017 942 847 978 792 769 613 843 1232 1080 679 RNA helicase DEAD31 AT5G60990 Solyc10g007560.2 15 6 7 8 0 0 0 0 6 0 2 0 2 3 16 Gibberellin 2 oxidase 2 (AHRD V3.3 *-* A0A024B654_9ERIC) Solyc10g007570.4 9 9 12 39 0 0 0 0 11 4 12 1 15 16 59 Gibberellin 2-oxidase (AHRD V3.3 *** C6GMF4_NICPL) Solyc10g007580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 VQ-like protein (AHRD V3.3 *-* A0A2U1QMP6_ARTAN) Solyc10g007590.4 374 482 293 464 445 473 485 526 427 423 278 391 527 457 384 Polyadenylate-binding protein-interacting protein 9 (AHRD V3.3 *** A0A2G3BCI2_CAPCH) AT3G14450 Solyc10g007600.3 6226 5896 3530 6261 2802 3240 4053 3135 4840 4995 4277 2631 3324 2574 3563 glycolate oxidase Solyc10g007610.4 268 394 469 442 464 515 509 346 330 374 412 320 458 487 359 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2U1N0V9_ARTAN) AT3G14410 Solyc10g007620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QNI1_9MAGN) Solyc10g007630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DnaJ heat shock amino-terminal domain protein (AHRD V3.3 *-* A0A2K3MU01_TRIPR) AT3G04960 Solyc10g007635.1 0 0 0 7 0 0 0 0 0 2 0 1 0 0 0 Glutathione S-transferase (AHRD V3.3 *** Q9FQE8_SOYBN) Solyc10g007650.3 664 834 1273 955 1089 1145 1152 806 582 650 1054 833 1116 943 911 Subunit f DNA-directed RNA polymerase (AHRD V3.3 *** A8ITN4_CHLRE) AT5G41010 Solyc10g007660.3 364 81 41 73 60 114 39 64 56 120 117 90 39 52 106 CASP-like protein (AHRD V3.3 *** A0A2I4EBH2_9ROSI) AT1G17200 Solyc10g007670.4 245 284 215 262 315 360 377 305 261 280 204 205 238 222 248 hypothetical protein (AHRD V3.3 *-* AT2G33180.1) AT2G33180 Solyc10g007680.4 266 126 156 127 150 119 129 105 141 166 182 126 113 107 136 Regulator of chromosome condensation (AHRD V3.3 *** A0A200Q2M9_9MAGN) AT5G48330 Solyc10g007690.3 5717 7661 4235 8686 13410 12567 12349 12166 7394 9493 5670 8147 6593 4076 6530 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A0F7H033_EROTE) AT1G61520 Solyc10g007700.3 351 260 263 266 360 294 325 363 307 291 336 252 254 213 273 Rab family GTPase (AHRD V3.3 *** A0A1Y1I8A7_KLENI) AT4G17170 Solyc10g007710.3 11 96 107 177 268 356 283 242 121 74 156 186 16 67 115 GDSL esterase/lipase (AHRD V3.3 *** A0A1J3CW88_NOCCA) AT5G50890 Solyc10g007720.4 631 1405 1205 1423 1497 1443 1630 1687 1362 1324 1084 1306 1247 1205 1156 Conserved oligomeric Golgi complex subunit 5 (AHRD V3.3 *** A0A200R154_9MAGN) AT1G67930 Solyc10g007730.3 105 105 128 152 109 142 148 107 94 99 123 120 88 82 136 forkhead-associated domain protein (AHRD V3.3 *** AT1G06510.1) AT1G06510 Solyc10g007740.3 420 433 437 461 501 467 472 535 538 460 490 459 467 521 467 Magnesium transporter CorA-like family protein (AHRD V3.3 *** A0A2U1Q7X3_ARTAN) AT1G29820 Solyc10g007750.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Plant basic secretory protein (BSP) family protein (AHRD V3.3 *** A0A2U1KY39_ARTAN) AT2G42900 Solyc10g007760.4 1168 1210 1141 1311 1431 1270 1417 1344 1497 1301 1038 1613 1099 1331 1140 Ribose-phosphate pyrophosphokinase (AHRD V3.3 *** A0A2U1NXC0_ARTAN) AT2G42910 Solyc10g007770.3 2577 1716 2592 2620 2551 2812 3250 2319 2601 2230 2835 2083 1769 2198 2864 Protein MEI2-like 5 (AHRD V3.3 *** A0A2G2YIV9_CAPAN) AT1G29400 Solyc10g007780.3 102 252 307 182 271 272 263 241 345 141 267 235 390 277 190 Transcription factor PAR2 (AHRD V3.3 *** A0A2G2WG50_CAPBA) AT1G06530 Solyc10g007790.3 36 74 123 67 124 213 153 122 52 47 104 104 67 85 26 Unknown protein Solyc10g007800.3 6624 6758 7775 15558 11356 9185 12557 12728 7999 7909 8310 16169 2652 7665 3650 Protodermal factor 1 (AHRD V3.3 *-* A0A2G2VRL1_CAPBA) AT2G42840 Solyc10g007810.3 1248 1002 1066 902 884 984 918 778 785 739 831 872 1058 963 1027 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *** A0A2I4DNF9_9ROSI) Solyc10g007820.3 23 28 119 66 63 61 36 21 29 13 79 47 41 40 67 HVA22-like protein (AHRD V3.3 *** A0A1U8EBR2_CAPAN) AT2G42820 Solyc10g007830.1 390 1559 1156 1272 8900 6114 6609 10016 2226 1091 2380 3229 2128 1424 487 Leucine-rich repeat family protein (AHRD V3.3 *** D7LJD1_ARALL) AT2G42800 Solyc10g007840.3 402 478 440 554 454 494 599 439 402 415 480 423 445 559 519 Glutamyl-tRNA(Gln) amidotransferase subunit A (AHRD V3.3 *** E4S4M7_CALKI) AT3G25660 Solyc10g007850.3 675 757 781 768 760 777 841 784 839 728 712 785 765 872 664 GPI-anchor transamidase (AHRD V3.3 *** A0A1U8GLL8_CAPAN) AT1G08750 Solyc10g007860.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200PPF3_9MAGN) Solyc10g007870.3 118 71 259 180 37 20 18 11 83 105 266 112 88 127 129 Tumor-related protein (AHRD V3.3 *** Q40447_9SOLA) Solyc10g007880.4 64 56 64 25 14 21 36 16 42 28 52 29 42 101 104 Cytochrome P450 (AHRD V3.3 *** A0A2U1MAN7_ARTAN) Solyc10g007890.4 3 0 0 0 0 0 0 0 0 1 1 0 1 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1MAN7_ARTAN) AT3G14690 Solyc10g007900.4 9 12 11 9 1 2 7 3 23 8 21 18 17 11 6 Cytochrome (AHRD V3.3 *** A0A2G3BCL0_CAPCH) Solyc10g007930.4 166 109 113 173 169 177 130 105 166 154 221 71 62 119 237 Cytochrome (AHRD V3.3 *** A0A2G3BCL0_CAPCH) Solyc10g007940.1 9 20 6 18 3 12 13 13 13 14 1 6 11 22 15 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WD78_9ASPA) AT3G16610 Solyc10g007950.4 522 556 701 577 652 782 749 661 692 424 661 632 466 577 503 Trehalose-6-phosphate synthase (AHRD V3.3 *** E5GC29_CUCME) AT1G06410 Solyc10g007960.1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 cytochrome P450 CYP74C3 Solyc10g007970.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 WRKY transcription factor 77 AT3G58710 Solyc10g007980.3 2060 3445 3117 2538 3595 3398 3280 3147 2262 1808 2582 2361 4262 3379 3294 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) AT3G58700 Solyc10g007990.3 3713 2228 1545 1664 893 1055 1004 843 1281 1618 1471 994 1775 1870 1974 Plant cysteine oxidase (AHRD V3.3 *** A0A2R6QBY4_ACTCH) AT2G42670 Solyc10g008000.1 291 258 340 488 221 175 186 224 462 272 279 245 889 516 1159 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A2G3BC27_CAPCH) Solyc10g008010.4 2101 2386 2254 1998 2577 2380 2245 2783 2204 1965 1683 2047 2541 2484 2034 Proteasome subunit alpha type (AHRD V3.3 *** S8CX89_9LAMI) AT1G16470 Solyc10g008020.3 209 315 206 393 700 803 710 603 350 244 189 310 284 247 350 S-adenosyl-L-methionine-dependent methyltransferase (AHRD V3.3 *** A0A2U1PPX3_ARTAN) Solyc10g008030.4 0 0 4 3 0 1 0 2 0 0 0 0 2 1 0 Protein trichome birefringence-like 40 (AHRD V3.3 *** A0A2G2VRS6_CAPBA) AT2G42570 Solyc10g008040.4 265 95 40 79 174 137 87 173 149 219 16 249 41 156 479 Seed biotin-containing protein SBP65 (AHRD V3.3 *-* SBP65_PEA) AT2G42560 Solyc10g008050.2 5 6 27 46 18 24 20 8 13 26 71 22 43 20 45 transmembrane protein (AHRD V3.3 --* AT2G31090.1) Solyc10g008060.4 211 222 253 295 299 289 313 237 253 243 291 258 199 283 196 DUF455 domain-containing protein (AHRD V3.3 *** A0A1Q3AWN5_CEPFO) AT1G06240 Solyc10g008070.4 889 726 755 695 809 769 833 1018 861 772 797 887 728 836 731 Transcription factor GTE4 (AHRD V3.3 *-* A0A2G2VRS1_CAPBA) Solyc10g008080.3 5 2 0 0 0 0 0 0 0 0 0 0 0 5 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LDD8_ARTAN) AT2G42360 Solyc10g008090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oligosaccharyltransferase complex/magnesium transporter family protein (AHRD V3.3 *** AT1G61790.2) Solyc10g008100.3 83 90 139 101 70 120 99 83 74 111 137 75 135 106 161 Glucosidase 2 subunit beta (AHRD V3.3 *** A0A2G3BC38_CAPCH) AT2G42390 Solyc10g008110.4 3659 2045 1859 1870 1421 1376 1368 1541 2106 2783 2046 2007 2193 2203 1975 Acyl-coenzyme A oxidase (AHRD V3.3 *** A0A1U8EF39_CAPAN) AT1G06290 Solyc10g008120.4 31 100 59 166 57 49 72 67 226 59 92 23 51 25 121 O-methyltransferase (AHRD V3.3 *** A0A1B4Z3W3_9ROSA) Solyc10g008130.3 988 667 655 502 387 419 401 334 460 421 677 538 637 610 736 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT3G56510.5) AT3G56510 Solyc10g008140.3 5914 7099 6514 5976 5165 5230 5128 5209 5257 4376 4860 5907 8634 7413 5943 Prohibitin (AHRD V3.3 *** A0A200QL97_9MAGN) AT4G28510 Solyc10g008150.1 0 2 9 1 0 1 4 2 1 0 4 4 0 0 0 Glutaredoxin (AHRD V3.3 *** A0A1R3G7J8_COCAP) Solyc10g008160.3 42 96 30 92 287 326 324 299 30 33 18 45 19 65 2 uniform ripening Solyc10g008180.2 0 5 2 7 40 23 48 23 7 9 11 9 5 1 1 26S proteasome non-ATPase regulatory subunit 2 homolog (AHRD V3.3 *** A0A2G2VRP9_CAPBA) Solyc10g008190.3 1101 1443 1598 1153 1353 1537 1469 1158 910 803 1339 1167 1533 1351 1236 Nucleic acid-binding, OB-fold (AHRD V3.3 *-* A0A2U1QDH2_ARTAN) AT2G33845 Solyc10g008200.4 10 108 47 53 256 206 227 280 75 44 17 120 16 43 19 Tyrosine aminotransferase (AHRD V3.3 *** A0A2G2XHT7_CAPBA) Solyc10g008205.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** B9RVV8_RICCO) AT5G44265 Solyc10g008210.3 84 908 854 1262 2243 2384 2228 2616 1179 520 864 1502 126 647 487 Protein TPX2 (AHRD V3.3 *** A0A2G2VWX8_CAPBA) AT1G03780 Solyc10g008220.4 529 390 428 390 150 161 170 205 331 496 416 268 498 440 350 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc10g008230.3 245 167 163 185 34 32 59 46 127 140 78 52 180 161 210 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc10g008240.3 1055 535 944 798 258 402 518 191 320 529 1090 271 616 650 633 Disease resistance protein (AHRD V3.3 *** A0A2U1M2V8_ARTAN) Solyc10g008243.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor bHLH36-like (AHRD V3.3 *-* A0A2I4FJG0_9ROSI) Solyc10g008247.1 5 2 5 2 0 0 0 0 9 16 29 0 13 9 16 transcription factor bHLH36-like (AHRD V3.3 *** A0A2I4FJG0_9ROSI) Solyc10g008260.2 24 2 0 0 0 0 0 0 1 4 0 0 5 1 0 bHLH transcription factor 093 Solyc10g008263.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor bHLH36-like (AHRD V3.3 *** A0A2I4FJG0_9ROSI) Solyc10g008267.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc10g008270.3 173 66 226 161 7 8 7 3 141 199 253 214 177 146 206 bHLH transcription factor 094 Solyc10g008280.3 1218 659 766 619 476 398 387 379 604 694 805 515 649 726 766 Protein kinase domain (AHRD V3.3 *** A0A200QBC6_9MAGN) Solyc10g008290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g008300.3 428 452 771 603 464 509 548 401 574 563 800 414 474 489 817 Mannan endo-1,4-beta-mannosidase (AHRD V3.3 *** A0A2K3MXH2_TRIPR) AT2G20680 Solyc10g008310.1 60 83 70 82 57 76 84 64 71 81 54 80 71 93 56 Pyrroline-5-carboxylate reductase (AHRD V3.3 *** Q9SY38_ARATH) AT4G03600 Solyc10g008320.1 46 917 934 407 1086 1117 1101 1362 856 235 408 874 327 1026 198 microtubule-associated protein (AHRD V3.3 *** AT4G28310.1) AT4G28310 Solyc10g008330.4 1 3 0 6 1 2 3 1 1 2 0 2 2 5 1 MLP-like protein 423 (AHRD V3.3 *** A0A2I4G2T9_9ROSI) Solyc10g008340.4 5243 4828 3529 4569 4330 4000 3932 5658 4164 6814 4157 5182 6255 5302 3524 DUF1421 domain-containing protein (AHRD V3.3 *-* A0A1Q3BQX3_CEPFO) AT4G28300 Solyc10g008350.4 310 439 1372 150 383 451 283 205 171 358 1016 279 472 205 455 hypothetical protein (AHRD V3.3 --* AT4G28290.2) AT4G28290 Solyc10g008360.2 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 GPI-anchored protein LORELEI (AHRD V3.3 *** A0A1J3HJ54_NOCCA) AT2G20700 Solyc10g008390.3 96 186 142 163 166 159 189 162 127 84 114 127 169 143 72 Thioredoxin (AHRD V3.3 *** A0A2G2YJA5_CAPAN) Solyc10g008400.1 1573 678 544 295 124 110 166 95 115 872 1195 349 272 373 729 E3 ubiquitin-protein ligase RMA1H1 (AHRD V3.3 *** A0A2G3BCU0_CAPCH) AT4G03510 Solyc10g008410.1 414 1138 691 1359 458 580 570 340 3801 3960 8247 5421 1362 1658 2690 E3 ubiquitin-protein ligase RMA1H1 (AHRD V3.3 *** A0A2G3BCW2_CAPCH) Solyc10g008420.3 1726 997 1167 1135 1119 1234 1253 1052 1077 1055 1080 1168 1133 1433 1142 acyl-UDP-N-acetylglucosamine O-acyltransferase (AHRD V3.3 *** AT4G28260.2) AT4G28260 Solyc10g008440.3 3 79 77 91 294 272 286 194 109 23 129 109 6 47 185 Expansin-B3 (AHRD V3.3 *** A0A2G3BCT4_CAPCH) Solyc10g008445.1 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc10g008450.2 166 241 262 286 284 405 335 294 224 244 281 304 260 287 288 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) AT3G06240 Solyc10g008455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc10g008460.3 190 194 286 291 325 286 306 281 358 387 373 316 313 368 332 lanC-like protein GCR2 (AHRD V3.3 *** A0A2I4H4K5_9ROSI) AT2G20770 Solyc10g008470.3 63 44 71 58 30 28 66 38 49 31 34 46 42 93 113 ELMO/CED-12 family protein (AHRD V3.3 *** A0A1P8APM3_ARATH) AT1G03620 Solyc10g008480.3 408 169 233 263 158 191 155 130 192 365 449 238 209 231 330 DUF789 domain-containing protein (AHRD V3.3 *** A0A1Q3CP56_CEPFO) AT4G03420 Solyc10g008490.3 61 54 86 123 70 79 91 78 59 51 103 52 33 50 24 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1PMG8_ARTAN) AT4G03415 Solyc10g008500.4 354 279 264 268 102 156 119 107 213 313 285 230 302 237 195 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *** A0A2U1PNL3_ARTAN) Solyc10g008510.3 47 62 23 54 37 36 50 48 65 46 47 34 37 53 58 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2YJ76_CAPAN) AT1G03560 Solyc10g150103.1 74 45 32 54 25 57 64 36 38 38 17 25 22 40 45 Unknown protein Solyc10g008520.3 1674 1908 821 1462 1261 1225 1078 1151 2207 1811 860 905 1508 1310 743 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1MRW5_ARTAN) AT4G03400 Solyc10g008530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform (AHRD V3.3 *** A0A2G3BCZ2_CAPCH) Solyc10g008540.3 261 274 335 483 471 499 442 491 268 418 307 486 439 440 311 multidrug resistance protein (AHRD V3.3 *** AT1G09812.1) AT1G11120 Solyc10g008550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Secretory carrier-associated membrane protein (AHRD V3.3 *** A0A2G2VRW6_CAPBA) Solyc10g008560.3 1123 1186 1163 1289 1272 1298 1191 1216 1049 1208 1038 1159 1161 1103 1141 Protein root UVB sensitive 6 (AHRD V3.3 *** A0A2G2VRX7_CAPBA) AT5G49820 Solyc10g008570.3 15 43 35 53 54 46 51 44 45 24 39 40 38 72 35 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VRV6_CAPBA) AT1G03540 Solyc10g008580.1 70 53 65 76 31 88 85 44 34 77 66 52 74 80 56 F-box domain-containing protein (AHRD V3.3 *** A0A1Q3CQC0_CEPFO) Solyc10g008590.1 26 44 9 45 24 29 30 33 17 18 24 26 29 43 38 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RBW3_9MAGN) AT1G03510 Solyc10g008600.3 146 304 319 415 302 323 337 295 243 167 193 326 326 388 275 embryo defective 1923 (AHRD V3.3 *** AT4G28210.1) AT4G28210 Solyc10g008610.1 22 27 18 29 32 29 26 15 10 25 4 19 13 9 7 Unknown protein Solyc10g008620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g008630.3 682 627 622 576 881 813 805 890 734 757 490 778 485 586 626 External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial (AHRD V3.3 *** A0A2G2VRV5_CAPBA) AT4G28220 Solyc10g008640.3 444 590 665 730 632 616 667 630 905 911 714 779 628 602 734 Diacylglycerol kinase (AHRD V3.3 *** A0A2G2YJ92_CAPAN) AT2G20900 Solyc10g008650.2 0 33 0 38 8 21 13 21 47 16 0 21 11 21 19 Transferase, Chloramphenicol acetyltransferase-like domain protein (AHRD V3.3 *-* A0A2U1N4D3_ARTAN) Solyc10g008660.2 214 462 38 226 606 437 548 557 353 596 117 435 286 149 47 Anthocyanidin 3-O-glucoside-6''-O-malonyltransferase (AHRD V3.3 *-* Q6WB13_CHRMO) Solyc10g008665.1 147 189 27 162 114 141 154 188 80 174 57 139 48 36 10 HXXXD-type acyl-transferase family protein (AHRD V3.3 *-* A0A2U1NMZ6_ARTAN) Solyc10g008670.3 127 79 62 73 47 72 94 45 48 40 40 57 41 31 11 HXXXD-type acyl-transferase family protein (AHRD V3.3 *-* A0A2U1NMZ6_ARTAN) AT3G29690 Solyc10g008680.3 2 6 0 6 0 3 2 0 3 6 0 5 6 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1NMZ6_ARTAN) AT5G39090 Solyc10g008700.3 7 3 6 0 0 0 0 0 1 6 0 0 0 25 13 R2R3MYB transcription factor 49 Solyc10g008710.3 3 6 7 75 1 3 3 1 56 23 30 26 2 9 18 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6PY02_ACTCH) Solyc10g008720.4 25 36 15 54 9 7 5 6 96 48 58 36 37 24 74 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3D516_CAPCH) Solyc10g008730.3 27 12 35 12 16 12 4 8 9 45 13 15 11 9 37 transmembrane protein (AHRD V3.3 *-* AT2G31090.1) AT2G31090 Solyc10g008740.3 633 1586 1452 1296 2124 1964 2096 2188 2038 1388 1229 1645 973 1173 1447 Mg-protoporphyrin IX chelatase (AHRD V3.3 *** A0A2G2YJA3_CAPAN) AT4G18480 Solyc10g008750.3 182 112 84 115 74 89 74 63 153 112 134 117 88 147 120 Nudix hydrolase 15, mitochondrial (AHRD V3.3 *** A0A2G3BCX3_CAPCH) Solyc10g008760.3 390 421 436 420 464 556 495 461 446 375 381 424 351 377 411 Nudix hydrolase 22, chloroplastic (AHRD V3.3 *** A0A2G2VRZ9_CAPBA) Solyc10g008770.3 630 596 928 810 839 765 866 625 625 718 731 775 692 675 708 Nudix hydrolase 22, chloroplastic (AHRD V3.3 *** A0A2G2YJB4_CAPAN) AT1G28960 Solyc10g008780.1 50 172 219 457 460 520 459 402 222 121 248 342 47 278 195 TCP transcription factor 30 Solyc10g008790.3 168 150 205 222 148 173 161 115 168 114 190 163 217 228 459 SUN-like protein 28 AT2G33990 Solyc10g008800.4 655 1098 836 761 1220 1133 1148 1278 1059 882 814 1173 1179 1156 726 Apoptosis inhibitory 5 (AHRD V3.3 *** A0A200QVJ7_9MAGN) AT2G34040 Solyc10g008810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2YJS1_CAPAN) Solyc10g008820.4 0 0 0 0 2 2 0 0 1 3 0 0 5 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2YJS1_CAPAN) Solyc10g008830.2 8 37 90 106 119 155 131 170 78 24 54 38 38 37 27 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3BD38_CAPCH) AT5G45960 Solyc10g008840.3 1 0 0 1 0 0 0 0 1 2 2 0 0 0 0 RAB GTPase (AHRD V3.3 *** A0A2U1Q460_ARTAN) Solyc10g008850.2 335 331 386 402 347 308 250 319 240 291 252 265 331 257 344 transmembrane protein (AHRD V3.3 *-* AT1G28540.1) AT1G28540 Solyc10g008860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2K3PNX3_TRIPR) AT4G27570 Solyc10g008870.3 1746 1304 1851 1747 1701 1632 1744 1244 1421 1320 1836 1235 1589 1533 2381 Transcription elongation factor 1 homolog (AHRD V3.3 *** A0A2G3BD30_CAPCH) AT5G46030 Solyc10g008880.3 466 387 522 648 438 451 464 316 358 420 489 386 406 490 784 Zinc finger transcription factor 56 AT1G28520 Solyc10g008890.3 105 146 166 177 138 162 199 109 138 140 176 152 169 148 195 OPA3-like protein (AHRD V3.3 *** A0A2I4G3K5_9ROSI) AT1G28510 Solyc10g008900.3 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 Dirigent protein (AHRD V3.3 *** K4CY66_SOLLC) Solyc10g008910.1 382 6790 5812 5771 9358 9550 7880 11973 4880 3286 5241 9083 1762 5336 1982 Histone H3 (AHRD V3.3 *** B3TM40_ELAGV) AT1G09200 Solyc10g008920.1 2 0 0 0 3 3 7 1 1 0 0 0 0 0 0 3'-5' exonuclease domain (AHRD V3.3 *-* A0A200QBM5_9MAGN) Solyc10g008930.1 73 46 34 37 13 15 12 7 22 18 15 19 39 26 73 glutaredoxin-C9-like (AHRD V3.3 *** A0A1U8EMM6_CAPAN) Solyc10g008950.3 1260 1226 1154 860 1109 1216 1133 1283 1283 942 944 1100 1058 1151 1187 Guanylate-binding family protein (AHRD V3.3 *** A0A2U1PP48_ARTAN) AT5G46070 Solyc10g008960.1 1 0 5 0 1 2 1 2 0 3 7 6 0 0 8 Protein kinase domain (AHRD V3.3 *** A0A200QKV2_9MAGN) AT5G46080 Solyc10g008970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF679 domain-containing protein (AHRD V3.3 *** A0A1Q3AXA9_CEPFO) AT4G18425 Solyc10g008980.4 6091 5685 5617 6683 6604 5464 6256 7404 8029 8530 5880 8123 4335 4576 5153 triose phosphate translocator AT5G46110 Solyc10g008990.4 728 850 798 782 968 1004 1012 981 784 780 768 686 745 919 852 Trafficking protein particle complex subunit 13 (AHRD V3.3 *** A0A1J3IPC4_NOCCA) AT2G47960 Solyc10g009000.4 424 349 365 240 246 304 261 237 327 289 218 226 408 454 362 snRNA-activating protein complex subunit (AHRD V3.3 *** A0A2G2YJG8_CAPAN) AT1G28560 Solyc10g009010.4 28 119 116 62 241 245 248 203 74 69 124 179 85 108 91 CBS domain-containing protein (AHRD V3.3 *** A0A1Q3C2E1_CEPFO) Solyc10g009020.3 228 67 65 110 71 77 41 41 45 93 83 123 73 78 149 RING/U-box superfamily protein (AHRD V3.3 *** F4JAD0_ARATH) AT5G58787 Solyc10g009030.4 779 923 888 906 972 877 870 813 837 1016 812 809 556 591 787 sphingolipid delta 4 desaturase AT4G04930 Solyc10g009040.4 232 390 357 402 561 514 515 505 367 310 276 413 456 426 335 defensin-like protein (AHRD V3.3 *-* AT4G21720.3) AT4G21720 Solyc10g009050.3 793 571 806 733 611 757 830 595 630 619 734 613 532 609 571 DUF616 domain-containing protein (AHRD V3.3 *** A0A1Q3BIE2_CEPFO) AT1G28240 Solyc10g009060.1 163 130 150 117 108 139 132 78 90 65 132 108 119 159 84 MAP kinase kinase kinase 72 Solyc10g009070.3 3904 2371 1979 1533 1344 1407 1382 1417 1658 1607 1674 1500 1817 2205 2217 RNA helicase DEAD32 AT1G77030 Solyc10g009080.4 107 152 332 350 1223 1187 1217 915 158 95 253 181 73 98 101 Squamosa promoter binding protein 3 AT2G33810 Solyc10g009090.3 133 192 174 151 142 166 133 119 137 151 236 125 236 208 154 Mitochondrial substrate carrier family protein (AHRD V3.3 *** A0A1P8B094_ARATH) AT2G33820 Solyc10g009100.3 42 46 45 58 37 44 65 31 27 48 24 17 22 38 36 Unknown protein Solyc10g009110.1 1692 832 715 351 220 115 150 146 474 508 1439 438 774 490 1287 ethylene response factor F.5 Solyc10g009120.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g009130.4 94 260 265 253 214 294 340 248 137 121 219 176 247 239 278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 (AHRD V3.3 *** A0A2I4DT87_9ROSI) AT1G28395 Solyc10g009140.3 2 8 13 22 3 12 6 15 8 7 7 10 4 2 1 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* A0A1P8AWR9_ARATH) AT4G04980 Solyc10g009150.3 35 61 283 655 96 81 56 70 119 478 240 21 66 34 699 Organ specific protein (AHRD V3.3 *-* A0A2U1PW62_ARTAN) Solyc10g009160.3 644 342 405 472 400 493 482 367 347 554 445 377 423 460 791 Bromodomain (AHRD V3.3 *** A0A200QTX5_9MAGN) AT1G61215 Solyc10g009170.2 0 0 0 6 0 0 0 2 2 0 14 0 0 1 0 Lysine ketoglutarate reductase trans-splicing-like protein (DUF707) (AHRD V3.3 *** A0A1P8AQH7_ARATH) AT1G61240 Solyc10g009180.3 2969 1362 1201 1166 835 823 745 1029 1168 2081 1251 1129 1776 1251 1262 Secretory carrier-associated membrane protein (AHRD V3.3 *** A0A1U8EFN5_CAPAN) Solyc10g009190.1 371 338 373 386 91 126 81 56 185 188 228 152 260 354 764 glycine-rich protein (AHRD V3.3 *-* AT4G21620.2) AT4G21620 Solyc10g009200.3 726 1130 1301 882 729 1016 906 732 801 505 1035 644 1466 1155 1032 Ribosomal RNA-processing protein (AHRD V3.3 *-* Q8W494_ARATH) AT1G11240 Solyc10g009210.4 730 678 1706 1172 400 433 371 342 724 667 1039 346 1377 828 714 Calmodulin binding protein-like (AHRD V3.3 *** A0A200QI92_9MAGN) Solyc10g009220.3 2417 2664 2279 2269 3225 3024 2819 3280 2972 2323 2226 2593 2895 2591 1858 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A2U1MU52_ARTAN) AT4G00830 Solyc10g009230.1 236 238 129 159 196 249 171 164 181 120 178 112 160 132 131 death domain associated protein (AHRD V3.3 --* AT2G46735.1) Solyc10g009240.3 105 160 147 121 18 39 23 36 144 143 365 132 100 111 221 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A1U8ENL9_CAPAN) AT1G01120 Solyc10g009250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g009260.1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 Unknown protein Solyc10g009270.3 23 19 2 8 0 2 3 0 6 13 12 0 1 3 0 bHLH transcription factor154 Solyc10g009280.4 3116 1626 1358 1569 1334 1543 1139 1428 1350 1683 1419 1704 1329 1472 1385 GRF1-interacting factor 2 (AHRD V3.3 *** A0A2G3BDJ8_CAPCH) AT4G00850 Solyc10g009290.1 328 543 412 603 837 894 877 918 299 338 103 200 282 298 166 bHLH transcription factor155 Solyc10g009310.4 0 0 0 0 0 0 0 0 0 0 0 7 4 0 165 Cytochrome P450 (AHRD V3.3 *** A0A2U1MQN4_ARTAN) AT2G46660 Solyc10g009320.3 185 196 163 296 253 204 180 204 344 192 338 170 119 85 219 NAD-dependent protein deacetylase HST1-like protein (AHRD V3.3 *-* AT2G46640.2) AT2G46640 Solyc10g009330.3 4241 2530 2707 2695 1954 2119 2340 1705 2005 1940 2243 2174 2662 2786 2679 Serine/arginine-rich-splicing factor RS31 (AHRD V3.3 *** A0A0M8KRT2_NICAT) AT3G61860 Solyc10g009340.1 367 318 649 382 107 151 118 131 292 223 507 143 594 331 340 Calcium-binding protein KIC (AHRD V3.3 *** A0A1U8EBK4_CAPAN) AT2G46600 Solyc10g009350.4 24 10 56 48 0 1 2 5 28 16 19 6 50 37 63 MAP kinase kinase kinase 73 AT5G41990 Solyc10g009360.4 86 100 140 106 107 82 116 79 64 87 108 89 70 85 101 Dof zinc finger protein (AHRD V3.3 *** A0A2K3M0E2_TRIPR) AT2G46590 Solyc10g009365.1 1 14 11 23 0 2 3 2 27 12 77 16 5 1 11 Unknown protein Solyc10g009380.3 617 1339 1270 1887 2552 1994 1963 2614 1496 2238 1317 2430 2283 1655 954 DUF688 domain-containing protein (AHRD V3.3 *** A0A1Q3BEA6_CEPFO) Solyc10g009390.3 0 0 0 3 0 1 3 1 1 2 5 4 3 0 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1MGJ0_ARTAN) AT1G01280 Solyc10g009400.3 329 294 272 155 153 156 178 136 74 94 104 157 362 258 244 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT5G27400.1) AT5G27400 Solyc10g009410.1 828 1329 1684 1830 1245 1204 929 1584 1832 2259 1680 1732 1701 1892 1040 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A072U5I5_MEDTR) AT1G01300 Solyc10g009420.3 39 75 67 126 81 81 63 105 72 89 49 76 52 64 46 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G2WSD8_CAPBA) Solyc10g009430.3 9 2 16 15 0 6 8 12 6 13 1 0 2 0 3 O-acyltransferase WSD1-like (AHRD V3.3 *** A0A2I4EG31_9ROSI) AT3G49210 Solyc10g009433.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g009437.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g009440.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B-9 (AHRD V3.3 *** A0A2G2VD28_CAPBA) AT5G47670 Solyc10g009450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A1J3E3C7_NOCCA) AT3G47150 Solyc10g009460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A1J3E3C7_NOCCA) AT3G47150 Solyc10g009470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g009480.4 0 18 24 8 10 7 7 8 10 12 23 8 5 3 73 Cytochrome and DOMON domain-containing protein (AHRD V3.3 *** A0A2G2YKN9_CAPAN) AT3G61750 Solyc10g009487.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1L556_ARTAN) Solyc10g009490.2 1239 1406 1810 1714 1466 1721 1905 1421 1938 1506 1753 1846 1389 1918 2043 PAP/OAS1 substrate-binding domain superfamily (AHRD V3.3 *-* A0A1I9LP98_ARATH) AT3G61690 Solyc10g009500.4 0 4 4 4 0 1 0 0 3 2 0 3 1 0 0 Bifunctional polymyxin resistance protein, ArnA (AHRD V3.3 *** A0A2U1QHU7_ARTAN) Solyc10g150104.1 10 9 23 12 3 1 0 0 6 3 4 2 8 22 22 Bifunctional polymyxin resistance protein, ArnA (AHRD V3.3 *** A0A2U1N595_ARTAN) Solyc10g150105.1 7 2 16 13 5 12 11 8 4 2 0 5 5 8 19 Bifunctional polymyxin resistance protein, ArnA (AHRD V3.3 *** A0A2U1N595_ARTAN) Solyc10g009540.1 0 1 5 0 11 3 1 1 0 1 0 0 0 0 0 Bifunctional polymyxin resistance protein, ArnA (AHRD V3.3 *** A0A2U1QHU7_ARTAN) Solyc10g009550.3 604 298 775 392 158 211 164 137 250 451 1136 295 652 354 514 WRKY transcription factor 42 Solyc10g009570.3 242 916 539 770 2104 1873 2449 1988 817 768 675 812 555 405 542 Rhodanese-like domain-containing protein 4, chloroplastic (AHRD V3.3 *** A0A2G2VSY7_CAPBA) AT4G01050 Solyc10g009580.4 198 106 87 246 110 145 145 174 76 375 37 161 56 50 179 Glycosyltransferase (AHRD V3.3 *** A0A2I4F8D3_9ROSI) AT4G01070 Solyc10g009590.4 0 2 0 4 0 2 1 0 3 0 0 0 0 0 0 Protein trichome birefringence-like 25 (AHRD V3.3 *** A0A2G2YK30_CAPAN) Solyc10g009595.1 96 76 0 384 0 0 0 0 80 67 41 11 12 4 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) AT1G21280 Solyc10g009600.1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1NZC8_ARTAN) Solyc10g009610.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1NZC8_ARTAN) AT2G46370 Solyc10g009620.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1MJ34_ARTAN) Solyc10g011650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1MJ34_ARTAN) Solyc10g009630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g011660.3 357 176 237 195 119 96 96 90 163 502 1080 92 214 115 131 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1NZC8_ARTAN) AT2G46370 Solyc10g011670.3 2278 1322 1145 1147 1090 938 906 1000 1047 1292 972 1080 1435 1283 1746 Mitochondrial carrier protein (AHRD V3.3 *** A0A200PUN8_9MAGN) AT4G01100 Solyc10g011680.4 5 5 0 5 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc10g011685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc10g011690.3 299 233 212 195 160 285 326 274 359 249 234 277 145 263 284 protein SPA1-RELATED 2-like (AHRD V3.3 *** A0A2I4HSY6_9ROSI) AT2G46340 Solyc10g011700.4 395 362 484 519 348 615 592 394 351 494 446 430 314 424 567 Unknown protein Solyc10g011710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease-like protein (AHRD V3.3 *-* A0A2K3N634_TRIPR) Solyc10g011720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G2XBY8_CAPBA) Solyc10g011730.3 66 130 168 130 316 190 244 154 92 72 200 93 69 64 106 Arabinogalactan peptide (AHRD V3.3 *** A0A200Q7C1_9MAGN) AT3G61640 Solyc10g011740.3 1045 862 3350 1317 669 626 667 497 648 1153 2039 576 751 676 1071 Ubiquitin-conjugating enzyme (AHRD V3.3 *** H6VUS9_9FABA) Solyc10g011750.3 30 65 62 69 76 94 83 88 72 40 68 59 49 56 70 Late embryogenesis abundant hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** Q5XV90_ARATH) AT2G46300 Solyc10g011760.3 167 306 297 364 517 694 671 493 226 197 317 322 168 241 188 Glucose-6-phosphate 1-epimerase (AHRD V3.3 *** A0A1U8EEQ4_CAPAN) Solyc10g011765.1 11 32 18 42 62 68 63 98 28 13 10 50 16 41 39 Unknown protein Solyc10g011770.4 982 2314 2035 2045 3284 2021 2338 2751 1694 2157 1659 2249 1768 1744 1503 Protein CURVATURE THYLAKOID 1A, chloroplastic (AHRD V3.3 *** A0A2G3BDI0_CAPCH) AT4G01150 Solyc10g011780.1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 eukaryotic translation initiation factor 1A (AHRD V3.3 *-* A0A2I4F8B5_9ROSI) Solyc10g011790.3 1184 1177 1040 1350 1356 1486 1206 1266 1258 1264 1216 1214 1234 1150 1069 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A1U8E4A8_CAPAN) AT3G61600 Solyc10g011800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g011810.4 636 559 1021 635 449 524 520 310 745 839 1030 688 729 653 794 Delta(8)-fatty-acid desaturase (AHRD V3.3 *** A0A2G3BES8_CAPCH) Solyc10g011820.4 226 1002 763 898 1383 1328 1257 1413 1226 613 649 1037 829 760 486 Delta(8)-fatty-acid desaturase (AHRD V3.3 *** A0A2G3BES8_CAPCH) Solyc10g011823.1 0 0 0 0 0 2 2 0 1 0 0 4 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g011827.1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc10g011830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EPIDERMAL PATTERNING FACTOR-like protein (AHRD V3.3 *-* A0A1P8AU73_ARATH),Pfam:PF17181 Solyc10g011840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphopantothenate--cysteine ligase 2 (AHRD V3.3 *** A0A1U8GMM4_CAPAN) Solyc10g011870.3 1374 1906 2005 2148 2349 2116 2166 2382 1624 1718 1962 1763 2271 1926 2063 Reticulon-like protein (AHRD V3.3 *** A0A2G2W6K7_CAPBA) AT4G23630 Solyc10g011880.1 93 113 182 239 109 134 128 99 130 158 238 153 120 142 116 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LSD7_ARTAN) AT2G46160 Solyc10g011900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Desiccation protectant protein Lea14-like protein (AHRD V3.3 *** A0A2G2VSN8_CAPBA) AT2G46140 Solyc10g011910.4 48 63 190 41 23 27 20 20 22 35 222 20 25 13 96 WRKY transcription factor 25 AT4G01250 Solyc10g011920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phenylalanine ammonia-lyase (AHRD V3.3 *-* A0A2G2VZP0_CAPBA) Solyc10g011925.1 0 0 0 2 0 0 0 0 0 0 0 0 0 4 1 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G3BJ62_CAPCH) Solyc10g011930.1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Phenylalanine ammonia-lyase (AHRD V3.3 *-* B5LAW0_CAPAN) Solyc10g011940.1 938 881 1499 1528 1139 1725 1427 1169 877 624 1016 1183 1054 1230 1445 SNF2_N domain-containing protein/Chromo domain-containing protein (AHRD V3.3 *-* A0A1Q3BJ60_CEPFO) Solyc10g011950.3 6 3 0 6 10 14 13 21 11 4 5 9 6 10 19 chromodomain-helicase-DNA-binding protein 5-like (AHRD V3.3 *-* XP_010326988.1) Solyc10g011960.3 166 229 431 443 528 543 616 398 164 96 389 89 329 203 356 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6RCM9_ACTCH) Solyc10g011980.3 850 526 523 475 253 374 379 323 343 364 487 357 537 407 447 Erythronate-4-phosphate dehydrogenase family protein (AHRD V3.3 *** Q8VYC6_ARATH) AT1G01500 Solyc10g011990.1 6 1 0 0 0 0 0 0 0 0 0 0 0 5 2 PHD finger family protein (AHRD V3.3 *** Q9LRN9_ARATH) AT3G17460 Solyc10g012000.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g012030.4 2648 2500 2428 2399 2232 2438 2367 2230 2539 2281 2274 2506 2537 2944 2341 chorismate synthase (AHRD V3.3 *** AT4G01290.2) AT4G01290 Solyc10g012050.3 34 21 14 23 23 9 12 14 9 9 12 9 11 25 24 Mechanosensitive ion channel protein 1, mitochondrial (AHRD V3.3 *** A0A2G3BDL8_CAPCH) AT4G00290 Solyc10g012060.3 213 334 180 180 221 223 205 161 193 194 105 142 344 313 234 Mechanosensitive ion channel protein 1, mitochondrial (AHRD V3.3 *** A0A2G3BDL8_CAPCH) AT4G00290 Solyc10g012070.4 2153 1999 1529 1632 1645 1676 1635 1669 1597 1729 1483 1635 1805 1596 1806 Protein BPS1, chloroplastic (AHRD V3.3 *** A0A2G2YY51_CAPAN) AT2G46080 Solyc10g012080.4 2077 1418 2557 1939 1110 919 1144 907 652 1927 3893 1094 1727 1376 1648 PLAC8 family protein (AHRD V3.3 *** A0A2U1MEC7_ARTAN) Solyc10g012090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g012100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AMP-dependent synthetase/ligase (AHRD V3.3 *-* A0A200QNF3_9MAGN) Solyc10g012110.3 0 0 0 0 0 0 0 0 0 0 0 3 0 2 0 non-specific lipid-transfer protein-like (AHRD V3.3 *** A0A1S4C1T6_TOBAC) Solyc10g012120.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 non-specific lipid-transfer protein-like (AHRD V3.3 *** A0A1S4C1T6_TOBAC) Solyc10g012130.1 0 1 0 0 0 0 0 2 2 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A1J6IRB3_NICAT) Solyc10g012135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3LWA1_TRIPR) Solyc10g012140.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2R6QBX4_ACTCH) Solyc10g012143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MRU3_TRIPR) Solyc10g012147.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc10g012150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A2R6QBX4_ACTCH) Solyc10g012160.3 287 336 417 360 272 304 349 258 287 236 255 247 352 427 391 Methyltransferase (AHRD V3.3 *** A0A2I0X7P3_9ASPA) AT1G22800 Solyc10g012170.3 128 118 241 105 51 104 109 56 121 156 170 100 205 129 141 Calmodulin-binding receptor-like cytoplasmic kinase 2 (AHRD V3.3 *** A0A2G3BDH9_CAPCH) AT4G00330 Solyc10g012180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 agamous-like MADS-box protein AGL62 (AHRD V3.3 *-* A0A2I4F5H9_9ROSI) Solyc10g012190.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter-like (AHRD V3.3 *** A0A200QQE5_9MAGN) Solyc10g012200.1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 agamous-like MADS-box protein AGL62 (AHRD V3.3 *-* A0A2I4F5H9_9ROSI) Solyc10g012210.3 40 52 67 77 62 50 50 70 81 43 51 68 47 34 47 AT-rich interactive domain-containing protein 1-like (AHRD V3.3 *-* A0A2I4HLX0_9ROSI) Solyc10g012213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L2, plastid (AHRD V3.3 *-* A0A2U1PJW3_ARTAN) Solyc10g012217.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2, chloroplastic (AHRD V3.3 *** I6N9C2_DATST) Solyc10g012230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc10g012240.3 218 170 236 199 256 295 269 355 260 354 314 268 184 185 306 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QU68_9MAGN) AT5G41340 Solyc10g012245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Rhomboid family protein (AHRD V3.3 *** A0A2K3L350_TRIPR) Solyc10g012270.2 0 0 0 2 0 0 0 0 0 3 9 0 0 3 0 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QU68_9MAGN) Solyc10g012280.2 7 3 0 0 0 1 0 0 2 3 0 0 3 5 0 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 --* AT3G44480.4) Solyc10g012290.1 7 12 11 4 0 0 0 1 8 10 3 3 12 8 3 NBS-LRR resistance protein (AHRD V3.3 *** A0A2K3NYK0_TRIPR) Solyc10g012295.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Rhomboid family protein (AHRD V3.3 *-* A0A2K3L294_TRIPR) AT5G25640 Solyc10g012320.3 4 0 0 1 0 0 0 0 2 0 5 0 0 0 0 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QU68_9MAGN) Solyc10g012330.1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 NBS-LRR resistance-like protein (AHRD V3.3 *-* A0A2U1LJD3_ARTAN) Solyc10g012340.1 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 NBS-LRR resistance protein (AHRD V3.3 *-* A0A2K3NU03_TRIPR) Solyc10g012350.3 4 3 1 0 0 1 0 0 0 0 4 0 0 0 5 Cc-nbs-lrr resistance protein (AHRD V3.3 *-* A0A2U1NMN8_ARTAN) Solyc10g012370.3 342 649 347 531 643 607 644 727 578 713 398 609 1146 608 432 Cysteine synthase (AHRD V3.3 *** A0A2I4HU78_9ROSI) AT3G61440 Solyc10g012380.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 agamous-like MADS-box protein AGL62 (AHRD V3.3 *-* A0A2I4F5H9_9ROSI) Solyc10g012400.3 23 66 105 129 128 143 128 111 119 51 67 104 71 75 58 LDL receptor wingless signaling/trafficking chaperone (AHRD V3.3 *** AT2G46000.1) AT2G46000 Solyc10g012410.3 242 251 301 316 432 382 325 404 266 257 203 316 207 221 227 ribosomal RNA small subunit methyltransferase G (AHRD V3.3 *** AT2G45990.2) AT2G45990 Solyc10g012420.3 359 399 503 342 477 481 550 476 530 374 372 391 466 544 453 mesoderm induction early response protein (AHRD V3.3 *** AT4G00355.3) AT2G45980 Solyc10g012430.3 1869 811 1143 826 433 584 659 508 521 907 721 594 884 794 1098 Signal peptide peptidase-like 4 (AHRD V3.3 *** A0A1U8EFB2_CAPAN) AT1G01650 Solyc10g012435.1 33 27 15 11 34 30 35 41 30 41 15 28 15 15 0 Unknown protein Solyc10g017480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** B3H4G1_ARATH) AT4G00467 Solyc10g017490.3 27 36 52 56 48 47 43 57 24 15 25 21 19 35 28 MAP kinase kinase kinase 74 Solyc10g017500.1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 Unknown protein Solyc10g017510.3 0 1 0 0 0 0 0 0 1 1 0 0 2 0 1 Cytochrome (AHRD V3.3 *** A0A1U8EF26_CAPAN) Solyc10g017520.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3C877_CEPFO) Solyc10g017530.3 2166 2740 2228 2442 2874 2715 2983 3250 2626 1955 1710 2393 2608 2603 2267 RNA helicase DEAD33 AT4G00660 Solyc10g017540.4 0 3 3 0 2 4 1 0 16 5 8 1 0 5 0 Remorin (AHRD V3.3 *** A0A1U8DSP8_CAPAN) Solyc10g017550.4 0 0 13 3 0 6 1 4 0 0 0 0 0 0 0 Actin-depolymerizing factor (AHRD V3.3 *** A0A2G3BT36_CAPCH) Solyc10g017560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g017570.3 19 64 50 35 103 82 63 102 46 76 22 33 123 32 6 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PI79_ARTAN) Solyc10g017580.3 383 387 474 406 413 390 325 393 357 413 433 285 344 478 489 Digalactosyldiacylglycerol synthase 2, chloroplastic (AHRD V3.3 *** A0A1U8EN08_CAPAN) AT4G00550 Solyc10g017590.3 1 0 1 2 0 0 2 5 2 1 0 0 7 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1PBS7_ARTAN) Solyc10g017600.3 606 1354 1312 1392 1531 1387 1477 1413 1191 837 1223 1149 1202 1209 939 Hexosyltransferase (AHRD V3.3 *** A0A2G2W3R9_CAPBA) Solyc10g017610.1 24 13 25 18 15 14 16 18 6 13 5 13 22 21 12 Unknown protein Solyc10g017620.3 0 0 6 8 0 0 8 2 0 0 0 0 0 0 0 fructokinase AY099454 Solyc10g017630.3 2 2 29 2 47 62 51 40 4 7 11 22 13 5 9 MADS-box protein (AHRD V3.3 *** A1BQ41_VITVI) Solyc10g017640.1 1 3 0 0 2 6 2 1 1 1 0 0 1 1 0 MADS-box transcription factor (AHRD V3.3 *-* Q1EMR8_PLAMJ) AT2G26320 Solyc10g017650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phospholipase D (AHRD V3.3 *** Q9AWB6_SOLLC) AT2G42010 Solyc10g017680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) Solyc10g017690.1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 Protein kinase (AHRD V3.3 *-* A7L4B0_CARPA) Solyc10g017700.1 2 5 0 2 0 0 1 0 0 0 0 0 0 0 0 Protein kinase (AHRD V3.3 *-* A7L4B0_CARPA) Solyc10g017710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase (AHRD V3.3 *-* A7L4B0_CARPA) Solyc10g017720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g017725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VXM7_9ASPA) Solyc10g017750.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 asparagine-rich protein-like (AHRD V3.3 *-* XP_020397117.1) Solyc10g017753.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb/SANT-like domain-containing protein (AHRD V3.3 *-* A0A2U1P375_ARTAN) Solyc10g017757.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CYU2_CEPFO) Solyc10g017790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF4378 domain-containing protein/VARLMGL domain-containing protein (AHRD V3.3 *-* A0A1Q3D613_CEPFO) Solyc10g017810.2 149 191 222 214 286 276 268 198 207 153 191 189 260 206 246 ATPase (AHRD V3.3 *** A0A1U8GE68_CAPAN) AT1G01910 Solyc10g017830.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase (AHRD V3.3 *-* A7L4B0_CARPA) Solyc10g017835.1 24 17 6 19 9 21 19 13 13 21 32 15 19 13 18 Unknown protein Solyc10g017850.3 2651 1939 1924 2052 1728 1628 1859 1836 2617 2066 2316 1790 1902 2093 2922 Peroxisomal membrane protein 11C (AHRD V3.3 *** A0A2G3BDG9_CAPCH) AT2G45740 Solyc10g017860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heat stress transcription factor B-3 (AHRD V3.3 *-* A0A2G3BHN4_CAPCH) Solyc10g017870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF4371 domain-containing protein (AHRD V3.3 *-* A0A1Q3CEV8_CEPFO) Solyc10g017880.2 3492 1174 876 919 815 647 683 775 982 1347 1188 1128 1018 1020 1162 F-box family protein (AHRD V3.3 *** A0A2U1QK66_ARTAN) Solyc10g017890.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 Photosystem I chlorophyll a apoprotein A1 (AHRD V3.3 *** A0A2G2XQN6_CAPBA) Solyc10g017900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* J7H3U2_CAPAN) Solyc10g017910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A1U8QCD9_CAPAN) Solyc10g017920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G3DGX3_CAPCH) Solyc10g017930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cytochrome b6/f complex subunit VIII (chloroplast) (AHRD V3.3 *** YP_009256027.1) Solyc10g017940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *** A0A0K0LTJ5_MELOF) Solyc10g017950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein Z (AHRD V3.3 *** A0A1U8QD60_CAPAN) Solyc10g017960.2 51 15 0 0 0 2 2 0 2 26 1 0 1 11 1 F-box protein PP2-A15 (AHRD V3.3 *** A0A2G3AGV7_CAPAN) AT3G61060 Solyc10g017965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g017970.1 0 0 0 0 0 1 0 0 0 1 0 0 0 2 0 Chitinase (AHRD V3.3 *-* B8QVJ5_ZEAMP) Solyc10g017980.1 3 6 0 0 0 0 0 0 0 23 1 5 0 10 0 Chitinase (AHRD V3.3 *-* B8QVJ5_ZEAMP) Solyc10g017985.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g017990.2 0 0 3 15 3 1 0 0 5 5 0 0 1 0 0 Cytokinin oxidase/dehydrogenase 2 (AHRD V3.3 *-* C0LPA7_SOLTU) Solyc10g017995.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc10g018000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc10g018010.2 267 177 186 121 87 86 78 102 136 155 82 157 71 107 122 Unknown protein Solyc10g018015.1 1 0 0 0 0 0 0 0 0 0 7 0 0 6 9 Unknown protein Solyc10g018020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc10g150106.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc10g018027.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc10g018030.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc10g018035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LWF9_ARTAN) Solyc10g018050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A8MRD0_ARATH) Solyc10g018070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A0A2K3LHY8_TRIPR) Solyc10g018080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2X320_CAPBA) Solyc10g018110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *** A0A2K3M5S8_TRIPR) Solyc10g018120.2 86 38 38 30 7 9 7 3 3 29 11 6 31 70 66 Neuronal PAS domain protein (AHRD V3.3 *** Q6DR18_ARATH) AT2G40390 Solyc10g018140.2 72 87 72 100 111 118 118 96 61 76 159 68 86 33 135 Dihydroflavonol-4-reductase (AHRD V3.3 *** A0A2K3N028_TRIPR) Solyc10g018150.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** A0A200Q2X8_9MAGN) AT2G42250 Solyc10g018160.2 520 597 632 613 575 582 638 665 542 564 442 606 660 551 482 S-acyltransferase (AHRD V3.3 *** A0A2G2VSI2_CAPBA) AT3G60800 Solyc10g018165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NR61_ARTAN) Solyc10g018180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *-* Q9ZSH4_SOLCH) Solyc10g018190.2 0 1 1 12 50 142 129 43 4 2 1 2 8 4 3 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NR61_ARTAN) Solyc10g018193.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018197.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0V6Q6_9ASPA) ATMG00810 Solyc10g018200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat/KH domain protein (DUF1442) (AHRD V3.3 *** O22136_ARATH) Solyc10g018203.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc10g018207.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc10g018250.2 1172 2219 2024 1740 2223 2453 2499 2153 1481 1233 1890 1666 2706 2406 2165 40S ribosomal protein S13 (AHRD V3.3 *** A0A2I0WN36_9ASPA) AT4G00100 Solyc10g018260.1 75 122 174 156 285 349 348 302 178 130 190 178 108 124 154 UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** A0A1J3F7T2_NOCCA) AT4G00110 Solyc10g018280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NHL domain-containing protein (AHRD V3.3 *-* A0A1Q3BMU0_CEPFO) Solyc10g018290.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NHL domain-containing protein (AHRD V3.3 *-* A0A1Q3BMU0_CEPFO) Solyc10g018300.3 1504 2938 1804 2278 3974 3398 3294 4489 3540 2626 1756 2800 1554 1750 2236 Transketolase (AHRD V3.3 *** A0A200R9X0_9MAGN) AT3G60750 Solyc10g018305.1 146 208 190 362 295 310 344 437 141 318 214 211 184 204 116 Unknown protein Solyc10g018310.1 103 37 91 113 125 110 124 88 72 92 76 103 55 59 47 Unknown protein Solyc10g018320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A061G797_THECC) Solyc10g018325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc10g018330.3 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 Plant invertase/pectin methylesterase inhibitor protein (AHRD V3.3 *** A0A2K3LH23_TRIPR) Solyc10g018340.1 12 0 0 2 0 0 0 0 0 0 0 0 0 10 0 Small auxin up-regulated RNA71 AT2G45210 Solyc10g018350.2 330 537 319 407 576 514 447 530 517 431 486 580 601 435 359 Vesicle-associated protein 1-4 (AHRD V3.3 *** A0A2G2VSJ1_CAPBA) AT3G60600 Solyc10g018353.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3K694_NOCCA) Solyc10g150107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNG8_9ASPA) ATMG00810 Solyc10g018380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tryptophan synthase beta chain (AHRD V3.3 *** B2IXG1_NOSP7) Solyc10g018390.3 4 2 0 2 0 1 1 0 0 2 2 0 1 1 1 Tryptophan synthase beta chain (AHRD V3.3 *** B2J8R2_NOSP7) AT5G28237 Solyc10g018420.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc10g018425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc10g018450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 methyl-CpG-binding domain-containing protein 2-like (AHRD V3.3 *-* A0A2I4DMV8_9ROSI) Solyc10g018460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methyl-CpG-binding domain-containing protein 2 (AHRD V3.3 *** A0A1U8GNC1_CAPAN) AT5G35330 Solyc10g018470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methyl-CpG-binding domain-containing protein 2 (AHRD V3.3 *-* A0A1U8GNC1_CAPAN) AT5G35330 Solyc10g018480.1 0 0 4 1 0 0 0 0 1 1 0 0 0 3 8 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein (AHRD V3.3 *-* A0A2P5EZ11_TREOI) Solyc10g018490.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-expansin-like protein (AHRD V3.3 *** Q9AXE4_TOBAC) Solyc10g018510.2 25 27 0 19 0 10 3 7 1 9 10 9 2 0 0 bHLH transcription factor 063 Solyc10g018520.1 2571 2181 1568 1260 1833 1833 1824 2100 2147 1908 1447 1798 1698 1776 1621 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein (AHRD V3.3 *** A0A1P8AVW8_ARATH) AT5G35910 Solyc10g018530.2 118 152 167 182 162 197 208 169 121 76 99 116 99 145 130 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200QBI0_9MAGN) AT3G20475 Solyc10g018540.2 48 60 65 120 97 80 132 83 82 52 37 67 32 57 28 DNA mismatch repair protein MSH5 (AHRD V3.3 *-* A0A2G2VSH8_CAPBA) Solyc10g018550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease h protein (AHRD V3.3 *** A0A2U1KZV0_ARTAN) AT1G04625 Solyc10g018560.2 0 22 13 26 168 207 218 278 11 8 3 34 0 34 0 GATA transcription factor (AHRD V3.3 *** K4CYY0_SOLLC) AT2G45050 Solyc10g018590.2 127 131 98 176 140 119 109 148 140 161 115 112 159 123 103 Plastid lipid-associated protein/fibrillin conserved domain-containing protein (AHRD V3.3 *** A0A2U1KDF3_ARTAN) AT4G00030 Solyc10g018595.1 2 1 4 0 0 1 6 4 1 1 0 0 0 0 0 Unknown protein Solyc10g018600.2 563 668 541 759 952 847 890 779 733 847 821 810 525 644 412 Cationic amino acid transporter (AHRD V3.3 *** S8E1X3_9LAMI) AT1G05940 Solyc10g018610.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2, chloroplastic (AHRD V3.3 *-* A0A0G2R7X3_MESCR) Solyc10g018620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018630.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018640.2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 zinc ion-binding protein (AHRD V3.3 *** AT3G60520.1) AT3G60520 Solyc10g018645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb/SANT-like domain (AHRD V3.3 *-* A0A200R712_9MAGN) Solyc10g018670.1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 DNA-3-methyladenine glycosylase (AHRD V3.3 *-* A0A1S1P1X9_METEX) Solyc10g018690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 spindle assembly abnormal protein (AHRD V3.3 --* AT3G22520.1) Solyc10g018700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g150108.1 13 2 1 1 0 1 2 0 0 10 0 4 6 4 7 Unknown protein Solyc10g018710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TCP transcription factor 1 (AHRD V3.3 *** G3BGU2_SOLLC) Solyc10g018713.1 5 2 5 0 3 2 0 0 3 1 5 5 3 1 0 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1KQG6_ARTAN) Solyc10g018717.1 1 5 4 0 0 0 0 3 0 2 0 0 0 1 0 Unknown protein Solyc10g018750.1 0 0 5 2 0 0 0 2 1 1 1 1 0 0 0 Metalloendoproteinase 1-like protein (AHRD V3.3 *-* A0A2K3N4W5_TRIPR) Solyc10g018760.1 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 Metalloendoproteinase 1-like protein (AHRD V3.3 *-* A0A2K3NXA7_TRIPR) Solyc10g018770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018773.1 8 0 0 3 0 0 4 1 1 2 4 3 1 0 0 Unknown protein Solyc10g018777.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc10g018780.3 1606 2652 1477 1683 3070 2087 2394 2677 2569 2734 1456 2201 3196 1800 868 Squamosa promoter binding protein 8a AT1G02065 Solyc10g018790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-functional NADPH-dependent codeinone reductase 2 (AHRD V3.3 *-* A0A2G3A0P9_CAPAN) Solyc10g018810.1 0 3 5 0 2 0 2 1 0 1 4 0 5 5 3 60S ribosomal protein L7a (AHRD V3.3 *-* A0A2G2ZG87_CAPAN) Solyc10g018813.1 19 15 26 49 11 14 9 16 11 24 34 23 8 26 28 Unknown protein Solyc10g150109.1 161 130 191 71 85 64 52 39 86 99 104 138 128 143 158 Unknown protein Solyc10g018850.2 320 286 362 286 416 454 485 420 363 237 306 362 306 395 261 Endo-1,3(4)-beta-D-glucanase (AHRD V3.3 *** A0A2I0WB41_9ASPA) AT3G23600 Solyc10g018860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018870.2 770 367 316 302 223 299 253 220 222 384 255 253 255 261 289 Melanoma-associated antigen G1-like protein (AHRD V3.3 *** A0A1P8AQU0_ARATH) AT1G34770 Solyc10g018880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018900.1 709 319 172 159 98 183 135 289 216 460 258 246 212 149 296 Unknown protein Solyc10g018905.1 0 5 0 3 0 0 0 4 20 14 20 5 4 0 2 Unknown protein Solyc10g018920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell number regulator 6 (AHRD V3.3 *** A0A2G2YKY7_CAPAN) Solyc10g018930.1 0 2 0 0 0 2 4 8 0 1 0 2 0 7 0 Unknown protein Solyc10g018940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g018950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 1 (AHRD V3.3 *-* A0A2U1NB45_ARTAN) Solyc10g018953.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S13 (AHRD V3.3 *** A0A0C5B313_9SOLA) Solyc10g018957.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 *-* AT2G07674.1) Solyc10g018980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc10g018990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2VDC7_CAPBA) Solyc10g019000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc10g019010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0U1ZJJ5_9SOLN) Solyc10g019015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g019020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g019030.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Interactor of constitutive active ROPs-like protein (AHRD V3.3 *-* A0A2K3NST4_TRIPR) Solyc10g019040.2 4331 2284 1920 1556 1670 1490 1430 1759 1909 2185 1476 1773 1769 1745 1896 kinetochore protein Nuf2 (AHRD V3.3 *** A0A2I4GDS6_9ROSI) AT1G61000 Solyc10g019050.2 103 54 40 71 57 36 31 38 51 78 48 67 59 49 27 Unknown protein Solyc10g019090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g150110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g019100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exocyst complex component SEC10 (AHRD V3.3 *-* A0A1U8FT20_CAPAN) Solyc10g019110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exocyst complex component SEC10 (AHRD V3.3 *** A0A2G2ZN90_CAPAN) Solyc10g019120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exocyst complex component SEC10 (AHRD V3.3 *-* A0A2G3CM22_CAPCH) Solyc10g019130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exocyst complex component SEC10 (AHRD V3.3 *-* A0A2G2ZN90_CAPAN) Solyc10g019140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exocyst complex component SEC10 (AHRD V3.3 *-* A0A2G3CM22_CAPCH) Solyc10g019145.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g019150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor MYB1R1 (AHRD V3.3 *** A0A2G3CMC2_CAPCH) Solyc10g019160.2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Double WRKY type transfactor (AHRD V3.3 *-* D2KU33_NICBE) Solyc10g019170.2 25 14 67 10 10 17 13 11 23 8 19 13 27 26 6 Unknown protein Solyc10g019175.1 186 139 324 142 55 78 76 52 118 123 213 98 148 148 413 Unknown protein Solyc10g019190.2 36 22 11 14 8 0 2 0 40 24 12 50 23 53 28 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *-* A0A2I4F6V5_9ROSI) Solyc10g019195.1 228 177 133 215 148 180 215 223 149 257 233 189 216 153 195 Unknown protein Solyc10g019200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) Solyc10g019205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GrpE protein homolog (AHRD V3.3 *-* Q9ZSP3_TOBAC) Solyc10g019210.1 0 0 0 2 0 0 2 1 2 0 4 0 0 3 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) Solyc10g019220.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) AT3G51210 Solyc10g019223.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc10g019227.1 1 0 7 7 13 7 0 10 0 3 11 0 0 9 0 Unknown protein Solyc10g019230.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A218WI36_PUNGR) Solyc10g019260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 120 AT3G60460 Solyc10g019270.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ABC transporter C family member 9 (AHRD V3.3 *** A0A2G2YKP5_CAPAN) Solyc10g019280.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter C family (AHRD V3.3 *-* A0A1Y1HYR1_KLENI) Solyc10g024320.2 491 1000 900 744 926 816 821 914 885 630 553 812 1069 1086 873 Lon protease homolog (AHRD V3.3 *** A0A1J3CVW6_NOCCA) AT5G26860 Solyc10g024330.3 18 14 3 2 2 4 8 3 8 5 12 7 8 2 1 Ankyrin repeat domain-containing protein 2 (AHRD V3.3 *** A0A2G2XWN6_CAPAN) Solyc10g024340.2 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 Ankyrin repeat domain-containing protein 2 (AHRD V3.3 *-* A0A2G2XWN6_CAPAN),Pfam:PF13857 Solyc10g024350.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mitochondrial import inner membrane translocase subunit TIM23-like protein (AHRD V3.3 *** A0A2K3MPU1_TRIPR),Pfam:PF02466 Solyc10g024360.2 64 343 254 293 756 792 833 877 420 212 170 225 146 212 196 Potassium channel AKT2 (AHRD V3.3 *** A0A1U8F4T5_CAPAN) AT4G22200 Solyc10g024365.1 76 33 56 35 12 33 33 15 53 34 66 32 32 32 72 Unknown protein Solyc10g024370.3 263 63 26 39 8 16 23 2 43 34 57 51 59 144 72 Phospholipase D (AHRD V3.3 *** K4CZ56_SOLLC) Solyc10g024380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FLOWERING LOCUS D-like (AHRD V3.3 *-* A0A2I4H638_9ROSI) Solyc10g024383.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* Q9FHA1_ARATH) Solyc10g024387.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g024410.2 1296 1020 1001 910 1026 872 948 1073 995 1418 1039 1103 961 942 973 Ribose-phosphate pyrophosphokinase (AHRD V3.3 *** A0A0U9HNH5_KLENI) AT2G44530 Solyc10g024420.3 17 2 1 11 3 8 1 3 29 0 0 0 5 0 15 ABC transporter C family member 9 (AHRD V3.3 *** A0A2G2VSW8_CAPBA) AT3G60160 Solyc10g024430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g024440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g024460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g024470.3 735 583 469 357 400 394 385 360 629 455 458 424 763 653 604 Chromo domain protein LHP1 (AHRD V3.3 *-* A0A2G3DIP3_CAPCH) AT5G17690 Solyc10g024480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Putative membrane lipoprotein (AHRD V3.3 *** AT5G17590.1) AT5G17590 Solyc10g024490.2 6 13 4 7 3 7 0 4 5 10 28 6 79 41 12 Protein NRT1/ PTR FAMILY 7.3 (AHRD V3.3 *** A0A2G2YL05_CAPAN) AT1G32450 Solyc10g024495.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Cyclin-A1-1 (AHRD V3.3 *-* A0A1U8GEH4_CAPAN) Solyc10g021280.1 2 0 1 0 0 1 0 6 0 0 0 0 2 1 2 Unknown protein Solyc10g032560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g032563.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g032565.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1P7E5_ARTAN) AT1G55290 Solyc10g032567.1 95 44 34 27 12 20 31 26 24 36 36 35 45 48 25 Unknown protein Solyc10g036640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g036660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g036770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g036810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g036820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g036830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g036840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g037850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein NETWORKED 3A (AHRD V3.3 *-* A0A2G3CXR8_CAPCH) Solyc10g037860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g037870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Potassium transporter (AHRD V3.3 *-* A0A2G2WI86_CAPBA) Solyc10g037880.3 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 Blue copper protein (AHRD V3.3 *** A0A2I0WGC8_9ASPA) AT3G60280 Solyc10g037890.3 334 333 261 300 307 346 396 230 298 264 410 276 248 301 450 dihydroorotate dehydrogenase (DUF3598) (AHRD V3.3 *-* AT2G44760.1) Solyc10g037900.1 205 201 169 223 272 266 225 299 242 257 153 225 209 230 202 dihydroorotate dehydrogenase (DUF3598) (AHRD V3.3 *** AT2G44760.1) AT2G44760 Solyc10g037910.3 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 SHAGGY-like kinase (AHRD V3.3 *-* M9WPU3_WHEAT) Solyc10g037920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g037930.2 0 0 0 3 0 0 0 0 3 1 0 1 0 0 8 coiled-coil domain-containing protein SCD2-like (AHRD V3.3 *-* A0A2I4GND9_9ROSI) Solyc10g037940.1 0 5 0 0 5 3 0 2 2 0 3 0 0 1 0 coiled-coil domain-containing protein SCD2-like (AHRD V3.3 *-* A0A2I4GND9_9ROSI) Solyc10g037950.2 259 367 288 274 342 289 279 526 450 288 206 436 390 329 267 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9FI36_ARATH) AT5G48020 Solyc10g037960.3 347 504 693 656 839 768 769 734 538 447 750 550 694 614 555 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9FI36_ARATH) Solyc10g037980.2 578 818 1051 829 1243 1224 1136 1156 791 697 782 838 1183 1073 847 Thioredoxin-like protein Clot (AHRD V3.3 *** A0A2G2XZE0_CAPAN) AT5G42850 Solyc10g037990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g038000.3 732 456 463 526 428 379 416 375 445 532 465 383 459 450 678 Zinc finger transcription factor 57 AT3G08505 Solyc10g038020.2 17 1 0 0 5 5 0 0 20 0 59 0 12 40 27 Cellulose synthase (AHRD V3.3 *-* K4BTR6_SOLLC) Solyc10g038030.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger (Ran-binding) family protein (AHRD V3.3 *-* A0A2U1KRR8_ARTAN) Solyc10g038040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger (Ran-binding) family protein (AHRD V3.3 --* AT2G17975.2) Solyc10g038045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc10g038060.2 72 41 34 52 50 50 28 35 36 32 75 33 36 61 78 Ribosomal L28 family (AHRD V3.3 *** A0A2U1PUF0_ARTAN) Solyc10g038080.3 36 93 104 115 159 175 175 212 174 130 147 106 181 185 145 Shikimate dehydrogenase (NADP(+)) (AHRD V3.3 *** A0A1G1USV4_9BACI) Solyc10g038090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bile acid:sodium symporter (AHRD V3.3 *-* A0A200PTK0_9MAGN) Solyc10g038100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bile acid:sodium symporter (AHRD V3.3 *-* A0A200PTK0_9MAGN) Solyc10g038110.1 90 113 55 63 105 74 52 118 135 112 44 78 116 109 114 Coatomer subunit delta (AHRD V3.3 *-* A0A2G2W8M4_CAPBA) Solyc10g038120.3 795 1075 850 938 843 897 934 932 1019 810 826 811 1348 1225 919 Coatomer subunit delta (AHRD V3.3 *** A0A2G2W8M4_CAPBA) Solyc10g038130.3 474 844 669 865 1029 969 1018 1083 674 703 813 804 683 627 617 Pectin acetylesterase (AHRD V3.3 *** K4CZD6_SOLLC) Solyc10g038140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycerate dehydrogenase HPR, peroxisomal (AHRD V3.3 *-* A0A2G2WJW2_CAPBA) Solyc10g038150.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ranBP2-type zinc finger protein isoform X4 (AHRD V3.3 *-* XP_019068375.1) Solyc10g038170.1 0 0 0 0 0 3 0 0 1 0 0 0 0 0 0 Phospholipase A1 (AHRD V3.3 *** A4ZX88_BRACM) AT2G44810 Solyc10g038175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3CN06_NOCCA) Solyc10g038180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VU20_9ASPA) Solyc10g038183.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g038185.1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 ATP-dependent RNA helicase (AHRD V3.3 *-* U9T5U8_RHIID) Solyc10g038187.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc10g038190.2 569 993 1076 1040 1345 1429 1544 1411 1116 887 994 1068 872 1092 918 Protein kinase G11A (AHRD V3.3 *** A0A2G2XSC6_CAPBA) AT2G44830 Solyc10g039190.2 2082 1831 1350 1100 974 1038 1070 1038 1140 1187 1151 1148 1880 1782 1402 WD40 repeat (AHRD V3.3 *** A0A200R5H2_9MAGN) AT3G21540 Solyc10g039193.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc10g039196.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g039197.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A1U8EMW1_CAPAN) Solyc10g039210.4 19 33 60 61 54 36 38 45 31 71 54 47 73 30 58 Cytochrome P450 (AHRD V3.3 *** A0A2U1Q1Z2_ARTAN) Solyc10g039215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g039220.1 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 photosystem II 44 kDa protein (chloroplast) (AHRD V3.3 --* YP_636500.1) Solyc10g039230.1 89 61 43 55 49 64 58 87 54 42 120 68 21 58 79 Unknown protein Solyc10g039235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g039250.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g039270.2 77 217 224 197 224 225 205 258 261 189 216 243 177 201 144 Peptidylprolyl isomerase (AHRD V3.3 *** A0A1U8FL13_CAPAN) AT3G60370 Solyc10g039280.2 330 451 383 390 361 471 525 392 338 307 408 308 386 428 397 Dual specificity phosphatase (AHRD V3.3 *** A0A200Q2H3_9MAGN) Solyc10g039290.2 265 488 331 459 90 64 77 96 490 322 729 106 284 267 492 Major facilitator superfamily protein (AHRD V3.3 *** A0A1P8AT47_ARATH) Solyc10g039293.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) Solyc10g039297.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g039350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g039360.2 2262 1514 1274 1570 1233 1280 1319 1438 1344 1914 1089 1396 1143 1170 1124 DUF1639 domain-containing protein (AHRD V3.3 *-* A0A1Q3BZV8_CEPFO) AT3G60410 Solyc10g150112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TCP transcription factor 19 (AHRD V3.3 *** G3BGV9_SOLLC) AT2G37000 Solyc10g150113.1 28 20 28 43 12 26 25 20 18 23 12 21 29 17 26 Ubiquitin-conjugating enzyme (AHRD V3.3 *-* A0A1Y1HS89_KLENI) Solyc10g039380.2 313 381 459 414 507 573 528 500 463 265 359 390 532 511 364 DNA repair REX1-B protein (AHRD V3.3 *** AT5G04910.1) AT5G04910 Solyc10g039383.1 49 27 35 59 49 39 67 61 51 52 16 67 44 54 22 Unknown protein Solyc10g039387.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc10g039390.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 heavy metal-associated isoprenylated plant protein 3 (AHRD V3.3 *** A0A1S3YFF0_TOBAC) AT1G29000 Solyc10g039430.3 683 494 566 352 452 417 377 489 558 466 271 392 645 525 434 hypothetical protein (AHRD V3.3 *** AT3G03560.1) AT3G03560 Solyc10g061840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1L2R0_ARTAN) AT3G11480 Solyc10g061845.1 2 1 0 6 0 3 1 0 3 1 1 0 0 3 0 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1NIL2_ARTAN) AT1G40087 Solyc10g061860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CDPK-related protein kinase (AHRD V3.3 *-* A0A1U8EC13_CAPAN) Solyc10g061870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-binding EF hand family protein (AHRD V3.3 *** A0A2U1PWG2_ARTAN) AT1G64850 Solyc10g061880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g061883.1 23 0 0 0 0 0 0 0 2 3 14 0 2 0 3 Unknown protein Solyc10g061885.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g061887.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *** J7H400_CAPAN) ATCG00890 Solyc10g061890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g061930.1 112 127 106 99 156 160 108 166 153 128 91 157 122 148 125 Casein kinase II subunit beta (AHRD V3.3 *** A0A1U8EDM5_CAPAN) Solyc10g061940.3 332 352 477 458 427 565 508 358 295 260 474 301 419 409 442 Casein kinase II subunit beta (AHRD V3.3 *** A0A1U8EDM5_CAPAN) Solyc10g061950.3 34 57 50 50 84 46 70 51 34 27 89 37 67 49 64 Unknown protein Solyc10g061955.1 53 70 77 51 33 50 27 44 43 32 63 53 75 37 41 protein app1 isoform X6 (AHRD V3.3 --* XP_006578505.1) Solyc10g061960.2 1460 1184 966 1744 1259 1016 1116 1133 972 1622 849 1245 1030 1161 966 phosphatidylinositol 4-phosphate 5-kinase 4-like (AHRD V3.3 *-* A0A2I4G100_9ROSI) AT4G17080 Solyc10g061970.2 14 65 59 56 87 82 89 71 54 52 82 74 60 54 71 60S ribosomal protein l37a-like (AHRD V3.3 *** A0A2K3N190_TRIPR) AT3G10950 Solyc10g061980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Neutral/alkaline invertase (AHRD V3.3 *-* V5N411_MANES) Solyc10g061990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *** A0A2G2X0J9_CAPBA) Solyc10g062000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *** A0A2G3CLL6_CAPCH) Solyc10g062010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g062020.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *-* R4IU74_VICFA) Solyc10g062040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 orf300 gene product (mitochondrion) (AHRD V3.3 *-* NP_064003.1) Solyc10g062050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 2 (AHRD V3.3 *-* A0A0B4L0G8_9ROSA) Solyc10g062060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transport membrane protein (AHRD V3.3 *-* A0A0C5ARU2_HYONI) Solyc10g062070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transport membrane protein (AHRD V3.3 *-* A0A0C5ARU2_HYONI) Solyc10g062080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4EWH9_9ROSI) Solyc10g062085.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 *-* A0A1I9LPR9_ARATH) Solyc10g062090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator, sugar transporter-like, Major facilitator superfamily domain protein (AHRD V3.3 *-* A0A2U1P068_ARTAN) Solyc10g062100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 sugar transporter ERD6-like 7 (AHRD V3.3 *-* A0A2I4F0V6_9ROSI) Solyc10g062110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator, sugar transporter-like, Major facilitator superfamily domain protein (AHRD V3.3 *-* A0A2U1NAN6_ARTAN) Solyc10g062120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g062130.1 25 7 0 16 3 6 14 5 7 13 4 5 1 5 16 Unknown protein Solyc10g062160.3 302 205 163 68 38 17 21 21 119 153 109 68 217 164 113 Dynamin (AHRD V3.3 *** E5GB64_CUCME) Solyc10g062180.2 948 918 823 745 762 696 763 722 997 744 674 806 836 944 814 RNA binding protein (AHRD V3.3 *-* A0A2K3MUE2_TRIPR) AT2G44710 Solyc10g062200.2 33 91 73 87 75 87 119 71 76 76 110 59 69 74 116 ELMO/CED-12 family protein (AHRD V3.3 *-* A0A2U1M924_ARTAN) Solyc10g062210.1 0 0 0 0 0 1 2 0 0 0 0 2 0 0 0 Unknown protein Solyc10g062220.2 91 75 52 47 65 70 48 92 78 68 44 66 83 48 45 ELMO/CED-12 family protein (AHRD V3.3 *** Q8VZ78_ARATH) Solyc10g062230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphate transporter PHO1-like protein 5 (AHRD V3.3 *-* A0A2G3ACI7_CAPAN) Solyc10g062235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *** K4EQH9_DATST) Solyc10g062340.2 2178 1901 1337 1271 1334 1501 1366 1782 1849 1619 1346 1744 1738 1863 1369 RNA binding protein (AHRD V3.3 *-* A0A2K3MUE2_TRIPR) AT2G44710 Solyc10g044440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g044443.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Signal recognition particle subunit SRP72 (AHRD V3.3 *-* A0A2G3BDT2_CAPCH) Solyc10g044447.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1P7E5_ARTAN) AT1G55290 Solyc10g044450.3 901 567 632 636 516 627 620 574 520 630 600 572 505 595 567 Regulator of nonsense transcripts UPF3 (AHRD V3.3 *** A0A2I0X275_9ASPA) AT1G33980 Solyc10g044470.3 2870 2564 1989 2553 3525 3437 3298 2937 2145 3157 2539 2099 2353 1874 3324 Chloride channel protein (AHRD V3.3 *** K4CZH2_SOLLC) AT5G49890 Solyc10g044480.2 1529 1557 1306 1493 1470 1508 1472 1646 1252 1493 1178 1337 1556 1580 1408 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G2Y1V0_CAPAN) AT1G10950 Solyc10g044510.2 205 361 323 370 311 410 487 336 256 298 371 330 247 245 411 MLO-like protein (AHRD V3.3 *** K4CZH6_SOLLC) AT1G11000 Solyc10g044520.3 3503 4780 2543 4107 8063 8221 7815 7144 3266 3282 2453 2601 2954 1670 2544 Ferredoxin (AHRD V3.3 *** A0A0K0PWX6_SOLLC) AT1G60950 Solyc10g044525.1 4 1 0 0 1 0 0 2 35 2 0 0 12 18 22 Unknown protein Solyc10g044530.1 3 0 0 1 0 3 0 3 1 2 0 2 1 1 0 Unknown protein Solyc10g044535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit b, chloroplastic (AHRD V3.3 *** I6N943_DATST) Solyc10g044550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit c, chloroplastic (AHRD V3.3 *** A0A1U8QD53_CAPAN) Solyc10g044560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit a, chloroplastic (AHRD V3.3 *** A0A2G3AX20_CAPCH) Solyc10g044565.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Formin-like protein (AHRD V3.3 *-* A0A1U8ECP6_CAPAN) Solyc10g044580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2B (AHRD V3.3 *** A0A1J7H994_LUPAN) Solyc10g044585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc10g044620.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FLOWERING locus D-like protein (AHRD V3.3 --* AT3G10390.1) Solyc10g044640.3 802 693 908 1002 785 1109 1084 755 618 688 934 736 628 780 934 Magnesium transporter NIPA (AHRD V3.3 *-* A0A0A2JFU3_PENEN) Solyc10g044670.3 2015 2519 2430 2537 2924 3478 3360 3326 3307 2360 2336 2860 2384 3045 2168 phytochrome A AT1G09570 Solyc10g044680.2 0 6 0 15 0 2 0 0 1 5 0 2 0 2 37 R2R3MYB transcription factor 55 AT1G09540 Solyc10g044683.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc10g044687.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g044690.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Annexin (AHRD V3.3 *** K4CZJ0_SOLLC) AT5G12380 Solyc10g044700.2 2 4 9 3 0 0 0 0 3 7 3 0 1 0 11 Calcium-binding EF-hand (AHRD V3.3 *-* A0A2U1MUT8_ARTAN) Solyc10g044710.2 122 155 246 158 137 194 199 163 168 130 196 148 140 221 187 TPR repeat (AHRD V3.3 *** B6SRQ6_MAIZE) AT3G05625 Solyc10g044720.3 97 102 166 93 90 111 129 94 87 88 106 136 56 90 79 Unknown protein Solyc10g044730.2 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g044740.2 1031 842 670 863 753 685 772 829 603 952 698 804 597 803 702 Aspartic proteinase-like protein 2 (AHRD V3.3 *** A0A1J6HZG4_NICAT) AT5G43100 Solyc10g044750.3 84 68 165 78 31 46 33 38 47 100 57 57 122 73 78 VHS domain-containing protein/GAT domain-containing protein (AHRD V3.3 *-* A0A1Q3DCS3_CEPFO) Solyc10g044780.2 1081 690 854 753 776 868 788 829 887 984 756 845 552 736 883 Cell cycle checkpoint control protein family (AHRD V3.3 *** A0A2U1MZQ8_ARTAN) AT3G05480 Solyc10g044820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g044830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** F4I9R1_ARATH) Solyc10g044840.2 187 305 299 277 436 456 508 566 437 330 259 382 198 219 195 YacP-like NYN domain protein (AHRD V3.3 *** F4IQD4_ARATH) AT2G02410 Solyc10g044860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Potassium transporter (AHRD V3.3 *-* A0A1U8GW25_CAPAN) Solyc10g044880.1 22 21 27 33 66 60 86 43 16 16 22 29 12 23 15 transmembrane protein (AHRD V3.3 *** AT5G19875.1) AT5G19875 Solyc10g044900.3 1591 1051 1246 1262 1167 1326 1431 999 1044 1122 1296 1035 945 1214 1402 Ion channel DMI1 (AHRD V3.3 *** A0A2G2VCA7_CAPBA) AT5G49960 Solyc10g044910.2 711 619 642 610 625 635 719 687 636 734 704 722 621 618 618 Protein EI24-like protein (AHRD V3.3 *** A0A2G2XBZ2_CAPBA),Pfam:PF07264 AT4G06676 Solyc10g044920.2 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 Unknown protein Solyc10g044940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g044950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g044960.3 1160 1254 816 894 936 1041 1090 1255 1114 1404 886 1286 1142 1165 771 Protein EMSY-LIKE 3 (AHRD V3.3 *** A0A2G2YL18_CAPAN) AT2G44440 Solyc10g044965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS box transcription factor AGAMOUS (AHRD V3.3 *** A0A1Q1NK16_PAELC) Solyc10g044970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g044980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2B (AHRD V3.3 *-* A0A2G3CVJ9_CAPCH) Solyc10g044982.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g044984.1 8 2 2 4 6 8 1 6 3 6 17 7 19 3 10 Unknown protein Solyc10g044986.1 10 1 0 1 7 1 5 5 1 0 0 0 15 7 25 Unknown protein Solyc10g044988.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc10g045020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g045030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g045040.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g045050.1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 Enolase (AHRD V3.3 *-* A0A2G2WR88_CAPBA) Solyc10g045080.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g045090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-dependent RNA helicase glh-2-like (AHRD V3.3 --* XP_022862024.1) Solyc10g045100.2 0 11 6 9 4 18 15 15 11 3 8 3 10 2 1 Phosphoglycerate mutase-like protein AT74 (AHRD V3.3 *** A0A2G3D945_CAPCH) Solyc10g045103.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g150114.1 1 0 0 1 7 1 1 0 2 0 2 0 3 1 0 Kinesin-like calmodulin-binding protein (AHRD V3.3 *-* A0A2G3D3X0_CAPCH) Solyc10g045110.1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 Unknown protein Solyc10g045140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Unknown protein Solyc10g045150.1 0 0 0 0 0 1 0 0 0 0 3 1 0 0 0 Unknown protein Solyc10g150115.1 252 150 215 136 57 82 79 45 75 85 112 65 106 156 116 Plant transposase (Ptta/En/Spm family) (AHRD V3.3 *-* F4I6H5_ARATH) Solyc10g045155.1 435 274 477 316 82 133 160 82 110 160 237 128 263 283 337 Unknown protein Solyc10g045157.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gag/pol polyprotein (AHRD V3.3 *-* A0A2K3PL47_TRIPR) Solyc10g045170.1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 Unknown protein Solyc10g045180.1 199 154 180 183 232 237 171 206 220 214 137 220 234 179 95 Zinc finger protein (AHRD V3.3 *-* A0A200RDE1_9MAGN) Solyc10g045190.3 3643 1778 1876 1533 1569 1805 1511 1126 1267 1631 2019 1395 1448 1532 1849 protein RDM1-like (AHRD V3.3 *** A0A1U7VRZ0_NICSY) AT3G22680 Solyc10g045220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome f (AHRD V3.3 *** A0A1L6Z652_CAPCH) Solyc10g045230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome b559 subunit alpha (AHRD V3.3 *** A0A328E4L8_9ASTE) Solyc10g045233.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X7W9_9ASPA) Solyc10g045237.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g045240.2 60 70 89 444 86 157 161 72 104 72 78 18 109 106 737 Beta-glucosidase (AHRD V3.3 *** F8R893_9MAGN) AT2G44480 Solyc10g045270.2 232 189 226 184 155 200 197 159 169 142 204 204 146 202 181 Protein kinase family protein (AHRD V3.3 *** X5I191_IPONI) Solyc10g045290.2 59 239 353 239 421 475 454 410 413 186 324 444 151 296 205 Kinase interacting (KIP1-like) family protein (AHRD V3.3 *** A0A2K3NUK8_TRIPR) AT3G22790 Solyc10g045310.2 286 289 401 351 251 225 318 207 250 155 279 251 333 427 383 DUF3531 domain-containing protein (AHRD V3.3 *** A0A1Q3B327_CEPFO) AT4G29400 Solyc10g045320.2 336 615 621 789 981 811 744 883 606 644 624 765 581 746 389 Unknown protein Solyc10g045350.2 145 223 172 159 203 211 234 234 219 143 216 144 215 220 176 ecotropic viral integration site protein (AHRD V3.3 *** AT2G44360.1) AT2G44360 Solyc10g045370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g045380.2 267 619 940 901 769 974 870 829 671 430 508 623 661 707 632 Vacuolar protein sorting-associated protein 62 (AHRD V3.3 *** A0A200RA51_9MAGN) AT2G44260 Solyc10g045385.1 52 43 108 111 95 100 83 80 44 75 38 71 44 51 52 Unknown protein Solyc10g045390.2 1391 1190 1258 945 1382 1403 1345 1484 1114 1216 1017 1266 1119 1136 943 histone acetyltransferase GCN5 (AHRD V3.3 *** A0A2I4GKZ2_9ROSI) AT3G54610 Solyc10g150116.1 0 0 1 0 0 2 0 0 0 0 0 1 0 4 0 Unknown protein Solyc10g045420.3 273 329 749 446 309 422 446 287 374 429 623 281 395 416 483 O-fucosyltransferase (AHRD V3.3 *** A0A2P5FQR3_TREOI) AT2G44500 Solyc10g045430.2 414 592 527 509 652 515 484 575 597 472 474 421 688 611 347 Phosphoglycerate mutase-like protein AT74H (AHRD V3.3 *** A0A1U8EQA1_CAPAN) AT3G05170 Solyc10g150117.1 179 222 295 184 184 162 196 239 223 190 216 236 179 229 127 Unknown protein Solyc10g045435.1 3 13 49 19 14 13 14 15 18 7 37 13 7 16 25 Unknown protein Solyc10g045437.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc10g045440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g045450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* A0A251TZ71_HELAN) Solyc10g045453.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g150118.1 0 1 0 0 0 0 0 0 5 0 0 0 0 0 0 Unknown protein Solyc10g045480.1 37 19 3 21 0 4 0 0 18 10 40 8 45 17 30 Pheromone receptor-like protein (AHRD V3.3 *** G7J5T8_MEDTR) Solyc10g045490.2 206 230 177 277 153 178 158 205 267 231 247 297 242 231 166 Plant organelle RNA recognition domain-containing protein (AHRD V3.3 *-* A0A2U1N2X7_ARTAN) AT5G62990 Solyc10g045500.3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Protein BONZAI 3 (AHRD V3.3 *-* A0A2G2WU78_CAPBA) Solyc10g045510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein BONZAI 3 (AHRD V3.3 *-* A0A2G2WU78_CAPBA) Solyc10g045520.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Protein BONZAI 3 (AHRD V3.3 *-* A0A2G2YKT4_CAPAN) Solyc10g045525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein BONZAI 3 (AHRD V3.3 *-* A0A2G3CHZ9_CAPCH) Solyc10g045540.2 968 880 733 635 771 738 742 808 715 572 603 772 837 784 793 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1N909_ARTAN) AT1G56440 Solyc10g045550.2 174 329 251 270 330 296 325 373 365 252 160 266 426 251 259 ras-related protein RABA2a (AHRD V3.3 *** A0A2I4HEM8_9ROSI) AT1G09630 Solyc10g150119.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g045580.1 0 3 0 0 0 0 1 0 3 6 1 4 0 0 0 Cytochrome c oxidase subunit 5C (AHRD V3.3 *** Q9ZTN1_PETHY) Solyc10g045590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-fructofuranosidase, insoluble isoenzyme CWINV2 (AHRD V3.3 *-* A0A2G3BGP1_CAPCH) Solyc10g045600.2 651 939 616 623 825 761 672 820 758 783 698 800 535 682 792 Transmembrane receptor (AHRD V3.3 *** A0A200QWH2_9MAGN) AT2G01070 Solyc10g045610.1 0 0 1 1 0 1 0 0 0 2 1 0 1 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1MF72_ARTAN) Solyc10g045630.2 992 961 556 582 641 509 503 729 668 906 410 697 668 715 469 plant/protein%2C putative (DUF3411) (AHRD V3.3 *** AT5G24690.1) Solyc10g045640.2 271 220 267 218 223 224 204 200 249 254 195 335 219 252 254 Transmembrane emp24 domain-containing protein p24delta5 (AHRD V3.3 *** A0A2G3A4C1_CAPAN) AT1G09580 Solyc10g045650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g045690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20 oxidase 2 (AHRD V3.3 *** A0A2G3CW21_CAPCH) Solyc10g045720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 syntaxin-22 (AHRD V3.3 --* XP_004251019.1) Solyc10g045723.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *-* A0A1Y0B159_9LAMI) Solyc10g045727.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *-* A0A0B4L0V2_9ROSA) Solyc10g045730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 6 (AHRD V3.3 *** U3TRZ0_TRITI) Solyc10g045740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S4 (AHRD V3.3 *-* A0A2H4NB20_SOLLC) Solyc10g045750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *-* A0A2P2CLG4_ARATH) Solyc10g045760.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *-* A0A2G3CV42_CAPCH) Solyc10g045765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *-* V9P5M0_SALMI) Solyc10g045770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20-oxidase (AHRD V3.3 *-* F2YRP3_CAPAN) Solyc10g045773.1 0 2 1 5 11 2 1 9 0 5 0 0 2 1 0 Unknown protein Solyc10g045777.1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 MP domain-containing protein (AHRD V3.3 *** A0A1Q3BUD1_CEPFO) Solyc10g046770.3 68 61 91 66 52 87 65 77 74 55 61 66 57 63 81 Trehalose-6-phosphate synthase 6 (AHRD V3.3 *-* B8AZZ8_ORYSI) Solyc10g046775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20-oxidase (AHRD V3.3 *-* F2YRP3_CAPAN) Solyc10g046790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone H2B.3 (AHRD V3.3 --* NP_001333220.1) Solyc10g046800.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20-oxidase (AHRD V3.3 *-* F2YRP3_CAPAN) Solyc10g046803.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20-oxidase (AHRD V3.3 *-* Q19PX8_VITVI) Solyc10g046807.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20 oxidase (AHRD V3.3 *-* A0A2L0V4M2_9APIA) Solyc10g046810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Elongation of fatty acids protein (AHRD V3.3 *-* K2S934_MACPH) Solyc10g046820.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20-oxidase (AHRD V3.3 *** F2YRP3_CAPAN) Solyc10g046830.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 elongation of fatty acids protein 3-like (AHRD V3.3 *** A0A2I4FV17_9ROSI) Solyc10g046840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* A0A0V0IUN0_SOLCH) Solyc10g046860.1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 6 Unknown protein Solyc10g046870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lipoxygenase (AHRD V3.3 *-* Q96574_SOLLC) Solyc10g046880.1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 Unknown protein Solyc10g046920.1 67 139 1447 3702 145 320 115 167 84 772 38 1516 0 397 219 Unknown protein Solyc10g046930.3 6290 5251 3522 3216 3003 2818 2820 3096 3663 3271 3194 3340 5013 4861 4234 AdoMet-dependent rRNA methyltransferase SPB1 (AHRD V3.3 *-* U9TNP9_RHIID) Solyc10g046935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) Solyc10g046970.2 1411 1164 1418 1295 1199 1207 1280 1106 1008 1286 1471 1137 1604 1348 1395 Tubby-like F-box protein (AHRD V3.3 *** A0A2G2VCE1_CAPBA) AT1G25280 Solyc10g046990.2 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g047000.2 2096 1748 1657 1291 1437 1276 1296 1274 1258 1497 1485 1403 1878 1561 1453 WD40 repeat (AHRD V3.3 *** A0A200PQB7_9MAGN) AT1G80670 Solyc10g047030.3 4 36 52 67 84 118 79 140 23 21 20 51 9 24 12 LEXYL1 AT5G64570 Solyc10g047040.3 71 57 129 135 93 140 118 106 111 123 182 181 122 144 175 Zinc finger transcription factor 58 Solyc10g047050.2 698 1236 1132 1064 1284 1148 1140 1569 1283 934 893 1184 1104 1301 898 Dynamin (AHRD V3.3 *** A0A200Q6U4_9MAGN) AT3G19720 Solyc10g047060.2 0 4 12 0 11 4 2 4 1 2 0 8 0 0 0 NAC domain-containing protein (AHRD V3.3 *** A0A2U1K9C2_ARTAN) Solyc10g047080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g150120.1 0 0 3 1 0 0 0 1 0 0 0 0 0 1 0 Unknown protein Solyc10g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L37 (AHRD V3.3 *** A0A2G2VAP4_CAPBA) Solyc10g047090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L2, chloroplastic (AHRD V3.3 *-* A0A291IBB3_9ROSI) Solyc10g047100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc10g047110.2 77 12 11 5 5 6 10 14 8 48 60 18 3 1 14 Peroxidase (AHRD V3.3 *** K4CZX5_SOLLC) Solyc10g047120.2 1298 1212 1141 1053 774 916 944 785 955 880 1111 1001 1550 1463 1441 tRNA (Guanine(10)-N2)-methyltransferase homolog (AHRD V3.3 *** A0A2I4FN97_9ROSI) AT3G26410 Solyc10g047130.2 1795 1132 1040 812 884 1133 932 1005 775 849 673 822 1034 878 1054 RNA-binding protein (AHRD V3.3 *** A0A1Y1HYH4_KLENI) AT3G26420 Solyc10g047140.2 1176 906 946 898 684 688 792 805 840 1149 777 904 951 934 757 Receptor-like kinase (AHRD V3.3 *** A0A0K9PIY0_ZOSMR) AT4G33430 Solyc10g047150.3 23 8 10 18 5 7 5 0 13 14 8 9 5 7 25 50S ribosomal protein L4 (AHRD V3.3 *-* A0A2G2Y9J5_CAPAN) Solyc10g047160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g047170.2 4 0 3 5 0 0 0 0 0 3 0 1 4 0 1 sulfate transporter 1 Solyc10g047175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc10g047180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 proteasome subunit alpha type-6-like (AHRD V3.3 --* XP_023524616.1) Solyc10g047200.1 2 0 0 3 3 0 0 0 0 1 0 1 0 0 0 Unknown protein Solyc10g047210.1 297 197 205 142 164 170 182 154 162 196 234 166 151 145 187 Hyccin (AHRD V3.3 *-* A0A2U1P7H9_ARTAN) Solyc10g047220.2 2193 1498 1668 1249 1389 1458 1441 1305 1369 1369 1572 1084 2010 1713 1574 plant/protein (AHRD V3.3 *** AT5G64160.1) AT5G64160 Solyc10g047230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g047240.2 53 52 173 70 83 72 41 37 55 81 185 29 81 63 186 annexin 9 AT5G12380 Solyc10g047260.1 0 1 1 0 0 1 0 1 0 1 0 2 3 1 0 Unknown protein Solyc10g047270.2 544 632 619 812 663 747 785 596 674 557 520 543 552 571 663 Potassium transporter (AHRD V3.3 *** K4CZZ0_SOLLC) AT5G09400 Solyc10g047290.2 934 692 656 608 542 470 479 563 713 690 616 507 981 665 639 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1L906_ARTAN) AT1G34750 Solyc10g047300.2 842 644 597 493 427 368 373 405 411 503 510 417 968 638 596 Outer envelope protein 64, mitochondrial (AHRD V3.3 *** A0A2G2YL85_CAPAN) AT5G09420 Solyc10g047310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 magnesium-dependent phosphatase 1-like (AHRD V3.3 *** A0A2I4DVQ5_9ROSI) Solyc10g047320.2 2837 2065 1830 1463 1511 1548 1567 1677 1967 3023 2014 1499 2484 1845 1390 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc10g047330.1 12 7 25 22 6 14 20 12 10 8 15 6 41 3 33 BnaC01g19540D protein (AHRD V3.3 -** A0A078GVZ6_BRANA) AT4G27380 Solyc10g047335.1 5 4 5 2 0 2 2 2 0 3 9 2 1 4 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g047340.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q4PSG2_ARATH) AT5G09430 Solyc10g047350.2 463 604 459 419 564 445 440 829 472 669 326 766 541 488 227 Lysine-specific histone demethylase 1-like protein 1 (AHRD V3.3 *-* A0A2G3BES3_CAPCH) Solyc10g047360.2 1480 1410 1537 1590 1635 1779 1812 1445 1186 1291 1349 1369 1940 1720 1508 Polyadenylate-binding protein (AHRD V3.3 *** G5DWR4_SILLA) Solyc10g047370.2 456 328 286 268 253 264 284 292 308 325 229 341 464 321 409 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2YK70_CAPAN) AT5G09450 Solyc10g047390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* I6N9B5_DATST) Solyc10g047400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *-* A0A1U8QCJ3_CAPAN) Solyc10g047410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2S0SUS0_9FABA) Solyc10g047420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* I6N9A7_DATST) Solyc10g047480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase 20 (AHRD V3.3 *** A0A2G3DCT4_CAPCH) Solyc10g047490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3PDP4_TRIPR) Solyc10g047500.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase AER61, uncharacterized (AHRD V3.3 *** A0A2U1P1L5_ARTAN) AT4G33600 Solyc10g047510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oligopeptide transporter (AHRD V3.3 *-* A0A200QXQ7_9MAGN) Solyc10g047520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 O-methyltransferase (AHRD V3.3 *-* A0A1B4Z3W1_9ROSA) Solyc10g047530.2 6 66 104 52 173 209 212 210 108 48 83 118 32 71 19 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1PJR6_ARTAN) AT5G64330 Solyc10g047540.3 25 103 123 111 229 248 205 223 148 66 112 150 58 93 48 basic helix loop helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT4G38062.1) Solyc10g047550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26S proteasome non-ATPase regulatory subunit 7-like protein B (AHRD V3.3 *-* A0A2G2YE80_CAPAN) Solyc10g047570.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1KXQ2_ARTAN) Solyc10g047580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 exopolygalacturonase-like (AHRD V3.3 *-* XP_025888966.1) Solyc10g047590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1KXQ2_ARTAN) Solyc10g047595.1 1 0 0 0 4 7 0 0 0 0 0 1 0 0 0 Unknown protein Solyc10g047600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g047610.3 3 11 54 44 57 65 23 29 23 8 21 17 13 3 12 Serine/arginine-rich-splicing factor RS2Z32 (AHRD V3.3 *-* A0A0M9UMT6_NICAT) Solyc10g047630.2 728 566 681 603 685 546 575 664 839 826 647 759 602 602 733 N-carbamoylputrescine amidase (AHRD V3.3 *** A0A2I0VK42_9ASPA) AT5G64370 Solyc10g047640.3 609 446 514 485 468 419 510 448 473 520 420 502 613 558 594 GATA transcription factor 28 (AHRD V3.3 *** A0A2G3AWS2_CAPCH) AT1G51600 Solyc10g047650.3 1394 2759 2954 3261 2674 2642 2817 2878 2660 3391 2308 3023 4804 3289 2242 CHCH domain containing protein, expressed (AHRD V3.3 *-* Q7XXS3_ORYSJ) AT5G09570 Solyc10g047653.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc10g047657.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc10g047660.1 70 22 41 83 27 55 49 28 49 44 57 74 49 71 73 CHCH (AHRD V3.3 *-* A0A200PNI6_9MAGN) Solyc10g047670.2 1182 698 797 578 508 477 417 451 714 750 766 570 904 716 983 HVA22-like protein (AHRD V3.3 *-* A0A1J3KAV2_NOCCA) Solyc10g047680.3 11 16 108 21 3 10 7 8 9 33 15 4 46 14 2 Protein kinase (AHRD V3.3 *** B6SW37_MAIZE) Solyc10g150122.1 142 137 224 136 159 150 200 73 204 103 350 274 136 223 300 Unknown protein Solyc10g047700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lectin-receptor kinase (AHRD V3.3 *-* A0A2U1KV35_ARTAN) Solyc10g047720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oleosin 14.9 kDa (AHRD V3.3 *** A0A2G3CHZ7_CAPCH) AT5G26805 Solyc10g047730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g047740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase (AHRD V3.3 *-* B6SW37_MAIZE) Solyc10g047745.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g047760.1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 DNA binding protein (AHRD V3.3 --* AT1G36095.1) Solyc10g047763.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g047767.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc10g047770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lectin receptor kinase (AHRD V3.3 *-* B8XSM9_WHEAT) Solyc10g047780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lectin (AHRD V3.3 *-* A0A2K3MY41_TRIPR) Solyc10g047800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g047810.3 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 Lectin receptor kinase (AHRD V3.3 *** Q6UY57_MEDTR) Solyc10g047820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB (AHRD V3.3 *-* A0A2U1Q3X4_ARTAN) AT2G04305 Solyc10g047821.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L19-2 (AHRD V3.3 *-* A0A2G3C1J0_CAPCH) Solyc10g047822.1 5 1 0 0 0 0 0 0 0 0 0 1 0 1 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2Y582_CAPAN) Solyc10g150123.1 3 0 0 0 0 0 0 0 1 0 0 4 0 0 0 Unknown protein Solyc10g047824.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g047825.1 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 Unknown protein Solyc10g047826.1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 7 Unknown protein Solyc10g150124.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc10g047828.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc10g047860.1 0 3 0 1 0 0 1 0 4 0 0 0 0 0 5 Unknown protein Solyc10g047865.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 L-ascorbate oxidase-like protein (AHRD V3.3 *-* A0A2G2Y5H1_CAPAN) Solyc10g047900.2 57 21 50 58 20 52 49 32 38 55 67 53 23 30 57 Unknown protein Solyc10g047930.2 846 749 697 726 756 722 702 772 646 807 755 552 675 714 769 Peptide-methionine (R)-S-oxide reductase (AHRD V3.3 *** A7U629_TOBAC) AT4G21860 Solyc10g047950.2 1225 1362 1311 1191 1706 1577 1512 2000 1257 1362 1288 1382 1334 1072 1260 Inorganic pyrophosphatase (AHRD V3.3 *** A0A2G3BV07_CAPCH) AT5G09650 Solyc10g047955.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Proteasome subunit alpha type (AHRD V3.3 *-* A0A1U8E914_CAPAN) Solyc10g047960.3 631 652 699 582 936 824 813 779 502 571 622 590 522 558 554 transmembrane protein (AHRD V3.3 *** AT3G49720.3) AT5G65810 Solyc10g047970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix Sin3-like protein (AHRD V3.3 *-* A0A178WJA6_ARATH) Solyc10g047980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 2 (AHRD V3.3 *-* A0A2G2XIB9_CAPBA) Solyc10g047990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *-* A0A2G2XC18_CAPBA) Solyc10g048000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix Sin3-like protein (AHRD V3.3 *-* A0A178WJA6_ARATH) Solyc10g048005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc10g048010.2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 DUF21 domain-containing protein (AHRD V3.3 *** A0A2G2W921_CAPBA) Solyc10g048015.1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc10g048030.2 306 290 723 631 48 48 35 11 296 273 873 172 267 449 617 MLP-like protein 43 (AHRD V3.3 *** A0A2U1KXS7_ARTAN) Solyc10g048040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pathogenesis-related protein 1 (AHRD V3.3 *** E2GEU4_9ROSI) Solyc10g048050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Developmentally-regulated GTP-binding protein 2 (AHRD V3.3 *-* A0A2G2WPW5_CAPBA) Solyc10g048060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *-* ATMG00030.1) ATMG00030 Solyc10g150125.1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g048070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF1005 family protein (DUF1005) (AHRD V3.3 *** A0A1P8B4T8_ARATH) Solyc10g048080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pathogenesis-related protein 1B (AHRD V3.3 *** PR1B_TOBAC) Solyc10g048090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g048100.3 3 3 15 0 0 3 3 0 0 3 0 1 6 1 0 Pathogenesis-related protein 1 (AHRD V3.3 *** A0A2K3L121_TRIPR) Solyc10g048110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g048120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF1005 family protein (DUF1005) (AHRD V3.3 *** Q9M0F0_ARATH) Solyc10g048130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome C biogenesis Fn protein (AHRD V3.3 *-* A0A072TGA7_MEDTR) Solyc10g048140.2 0 0 2 2 0 0 0 0 0 0 0 1 0 0 0 Zinc finger protein (AHRD V3.3 *-* A0A200QFH3_9MAGN) Solyc10g048150.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g048180.1 1 1 1 6 3 7 7 3 1 2 2 8 0 1 0 Amino acid transporter (AHRD V3.3 *** A0A200PYH9_9MAGN) Solyc10g048190.1 13 87 180 122 225 253 159 187 72 68 104 215 104 179 26 EVE domain (AHRD V3.3 *** A0A200QGB1_9MAGN) AT2G14660 Solyc10g048195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine carboxypeptidase (AHRD V3.3 *-* A0A2U1P833_ARTAN) Solyc10g049210.3 276 187 278 271 275 234 259 247 403 283 256 346 310 362 372 Serine carboxypeptidase (AHRD V3.3 *** A0A2U1P833_ARTAN) Solyc10g049213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g049217.1 0 0 0 0 0 0 0 4 0 0 3 0 0 0 0 Unknown protein Solyc10g049230.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 disease resistance protein RGA2-like (AHRD V3.3 *-* XP_010321233.1) Solyc10g049250.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine carboxypeptidase (AHRD V3.3 *-* A0A2U1P833_ARTAN) Solyc10g150126.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g049260.2 1 0 4 0 0 0 8 0 2 1 2 0 3 0 0 ADP-ribosylation factor (AHRD V3.3 *-* A0A2U1LV56_ARTAN) Solyc10g049265.1 0 0 0 3 0 1 0 0 0 2 0 0 0 0 0 Unknown protein Solyc10g049270.2 8 19 28 7 1 9 4 1 4 9 12 9 14 13 15 Serine carboxypeptidase (AHRD V3.3 *** A0A2U1P833_ARTAN) Solyc10g049280.2 7 5 3 4 22 17 24 23 6 9 26 11 5 0 0 Nucleobase-ascorbate transporter 8 (AHRD V3.3 *** A0A2G2V1P3_CAPBA) AT1G49960 Solyc10g049283.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc10g049287.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc10g049300.3 0 0 5 0 0 0 1 0 0 0 0 0 0 0 0 annexin A7-like isoform X1 (AHRD V3.3 *-* XP_019071560.1) Solyc10g049305.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g049330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 myosin-J heavy chain-like isoform X1 (AHRD V3.3 --* XP_024926360.1) Solyc10g049335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g049340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NHD4_TRIPR) Solyc10g049350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DnaJ domain (AHRD V3.3 *-* A0A200QGM0_9MAGN) Solyc10g049360.2 1166 1009 1005 957 1012 903 952 952 992 986 810 1042 975 915 843 cyclin A3_6 Solyc10g049365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X5D7_9ASPA) Solyc10g049370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G3A4H7_CAPAN) Solyc10g049380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G3A4H7_CAPAN) Solyc10g049410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1-like protein 1 (AHRD V3.3 *-* A0A2G3BES3_CAPCH) Solyc10g049415.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3JUZ2_TRIPR) Solyc10g049420.2 1806 664 1798 1641 219 242 176 160 855 1928 1992 566 733 1980 2644 Unknown protein Solyc10g049425.1 0 3 0 0 0 0 0 0 0 7 6 0 0 0 0 Unknown protein Solyc10g049430.1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A1J7G4W6_LUPAN) Solyc10g049440.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A2G3A459_CAPAN) Solyc10g049450.2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A0K9RLL8_SPIOL) Solyc10g049470.1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc10g049472.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter G family member 3 (AHRD V3.3 *-* A0A2G3BBT7_CAPCH) Solyc10g049474.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Serine/threonine-protein kinase STN7 chloroplastic-like (AHRD V3.3 *-* A0A2K3N0Z0_TRIPR) Solyc10g049476.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3J2T0_NOCCA) Solyc10g049478.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-directed DNA polymerase (AHRD V3.3 *-* A0A2I0W6H4_9ASPA) Solyc10g049500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1QHF5_ARTAN) Solyc10g049510.3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A328DLS1_9ASTE) Solyc10g049515.1 204 84 118 61 49 63 57 60 33 69 101 59 103 56 95 Unknown protein Solyc10g049520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g049530.3 0 0 0 1 0 2 0 2 3 1 8 1 0 1 0 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3CJR2_CEPFO) Solyc10g049540.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A2U1QHF5_ARTAN) Solyc10g049550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *-* A0A2G3BNZ9_CAPCH) Solyc10g049560.3 86 39 95 45 45 62 49 55 24 60 75 33 31 41 145 Pheophytinase, chloroplastic (AHRD V3.3 *-* A0A2G3AKP9_CAPAN) Solyc10g049570.3 282 211 171 244 167 156 144 184 161 217 85 276 195 212 179 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2XMD3_CAPBA) Solyc10g049580.2 170 1695 1411 4392 1127 824 1607 1416 706 4172 1683 1158 644 1237 3444 classical arabinogalactan protein 9-like (AHRD V3.3 *-* XP_004248771.3) Solyc10g049585.1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc10g049590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2S0SV23_9FABA) Solyc10g049600.3 439 199 312 297 88 92 57 58 373 376 272 266 229 324 391 3-oxo-Delta(4,5)-steroid 5-beta-reductase (AHRD V3.3 *** A0A2G3BY50_CAPCH) AT4G24220 Solyc10g049605.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VHP9_9ASPA) Solyc10g049620.2 540 729 574 617 837 811 795 927 687 691 391 667 650 527 585 Progesterone 5-beta-reductase 4 (AHRD V3.3 *** A0A0A0S3B2_CATRO) AT4G24220 Solyc10g049630.2 301 169 808 182 30 49 66 58 121 279 802 178 172 175 334 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1MLG3_ARTAN) AT4G33920 Solyc10g049640.2 296 248 385 379 231 327 249 175 216 354 601 386 244 356 382 Amino acid/polyamine transporter I (AHRD V3.3 *** A0A200R342_9MAGN) AT3G19553 Solyc10g049650.3 347 276 250 362 323 343 314 263 218 343 284 300 316 295 262 histone deacetylase 6 (AHRD V3.3 *** A0A2I4H7I2_9ROSI) Solyc10g049660.2 0 26 12 3 22 25 23 14 9 9 3 9 1 7 1 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1N5P4_ARTAN) AT2G14820 Solyc10g049663.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3H3W0_NOCCA) Solyc10g049667.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc10g049710.2 1526 2362 1763 1993 2674 1886 1871 2838 2260 2336 1472 2261 2085 2000 1368 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** A0A2G2YL68_CAPAN) AT1G49970 Solyc10g049715.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VA19_9ASPA) ATMG00810 Solyc10g049720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 156 AT2G14760 Solyc10g049750.3 16 15 16 37 32 17 16 21 20 35 17 46 7 24 0 SNF2-related (AHRD V3.3 *** A0A200QH53_9MAGN) AT1G05120 Solyc10g049755.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g049770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor bHLH54 (AHRD V3.3 *-* A0A2G2YKN6_CAPAN) Solyc10g049773.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g049775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc10g049777.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1LE49_ARTAN) Solyc10g049780.1 0 0 2 3 0 0 0 2 0 0 0 0 0 0 0 bHLH transcription factor157 Solyc10g049790.1 41 35 124 53 78 94 77 65 52 34 51 69 51 55 74 DUF936 domain-containing protein (AHRD V3.3 *-* A0A1Q3D8D2_CEPFO) Solyc10g049800.2 30 30 34 30 47 31 46 43 46 24 15 59 19 21 15 BnaC03g41030D protein (AHRD V3.3 *-* A0A078GC68_BRANA) AT3G19610 Solyc10g049810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g049815.1 29 23 70 47 64 58 80 44 16 22 50 22 12 45 22 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3DFU3_CEPFO) AT3G18960 Solyc10g049830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DnaJ domain (AHRD V3.3 *-* A0A200QGM0_9MAGN) Solyc10g049840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DnaJ domain (AHRD V3.3 *-* A0A200QGM0_9MAGN) Solyc10g049850.3 798 886 1130 1239 1344 1335 1556 1288 1146 902 1156 1143 991 1101 962 TIP41-like protein (AHRD V3.3 *** A0A200QZN1_9MAGN) AT4G34270 Solyc10g049870.1 46 89 22 61 224 163 116 110 82 45 81 10 17 37 45 Zinc finger protein (AHRD V3.3 *** A0A200QZQ7_9MAGN) Solyc10g049890.3 165 540 223 252 492 450 453 566 325 348 208 406 508 494 227 D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** A0A2G2VSK7_CAPBA) AT4G34200 Solyc10g049900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 diiron containing four-helix bundle family ferritin protein%2C putative (Protein of unknown function DUF455) (AHRD V3.3 *-* AT1G06240.1) Solyc10g049910.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Cyclase (AHRD V3.3 *-* A0A2U1Q436_ARTAN) Solyc10g049913.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cyclase-like protein (AHRD V3.3 *-* C8TFG5_ORYSI) Solyc10g049917.1 150 119 96 160 139 112 154 116 75 201 81 122 136 89 81 Unknown protein Solyc10g049930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cyclase (AHRD V3.3 *-* A0A2U1N3U5_ARTAN) Solyc10g049940.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g049945.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc10g049970.2 769 435 385 462 266 264 231 266 482 727 537 392 376 509 481 Kynurenine formamidase (AHRD V3.3 *** A0A1J3JDK4_NOCCA) Solyc10g049980.1 0 1 0 0 1 2 0 0 1 0 2 0 2 0 0 Unknown protein Solyc10g049990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Methyl-CpG-binding domain-containing protein 6 (AHRD V3.3 *** A0A2G3AU76_CAPCH) Solyc10g049993.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g049997.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050030.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ras gtpase (AHRD V3.3 *-* A0A1J9QT15_9PEZI) Solyc10g050040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ras-related protein RABA4c (AHRD V3.3 *-* A0A2G2VWF6_CAPBA) Solyc10g050050.1 0 0 3 0 0 0 0 0 0 0 0 0 0 3 0 Disease resistance protein (AHRD V3.3 *-* A0A200QRC8_9MAGN) Solyc10g050055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin carboxyl-terminal hydrolase-related protein (AHRD V3.3 *-* AT3G47890.2) Solyc10g050060.2 2698 1883 4866 4334 2494 2076 2561 2794 1094 5189 3326 1936 2307 2455 1569 C2 domain-containing protein (AHRD V3.3 *** B1Q483_CAPCH) AT4G34150 Solyc10g050065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050080.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 CDPK-related protein kinase (AHRD V3.3 *-* A0A1U8EC13_CAPAN) Solyc10g050085.1 38 35 56 73 53 77 66 58 22 30 12 57 13 39 9 Unknown protein Solyc10g050090.1 0 0 0 2 0 0 3 0 3 0 0 1 0 0 0 Unknown protein Solyc10g150127.1 8 12 0 31 8 8 15 11 7 4 27 13 2 1 10 ABC transporter D family member 1 (AHRD V3.3 *-* A0A1U8F2E2_CAPAN) Solyc10g050100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050105.1 2 7 8 5 14 17 11 11 4 8 4 5 8 3 0 Rhomboid-like protein (AHRD V3.3 *-* A0A1U8GP08_CAPAN) Solyc10g050110.1 3181 2215 1597 2401 3320 2832 2749 2545 2762 3587 3075 1732 1308 1647 2386 Leucine-rich repeat family protein (AHRD V3.3 *** G3CHK6_PONTR) AT3G19320 Solyc10g050140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050160.2 63 162 116 152 226 169 178 169 215 193 84 43 97 159 137 Caffeoyl CoA O-methyltransferase (AHRD V3.3 *** A0A2U1N686_ARTAN) Solyc10g050170.3 1112 866 911 1033 967 886 832 958 981 968 890 836 893 904 1008 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B1Z6_ARATH) AT4G34040 Solyc10g050180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050190.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endonuclease or glycosyl hydrolase (AHRD V3.3 *** A0A2U1M201_ARTAN) AT2G15560 Solyc10g050200.1 4 3 51 13 10 19 12 2 5 15 1 7 7 9 16 DUF679 domain-containing protein (AHRD V3.3 *** A0A1Q3D401_CEPFO) Solyc10g050210.3 157 114 260 190 114 151 158 98 286 156 346 370 186 158 373 ABSCISIC ACID-INSENSITIVE 5-like protein 5 (AHRD V3.3 *** A0A1U8GBR9_CAPAN) Solyc10g050220.2 51 64 145 34 27 32 23 24 51 11 105 61 48 84 93 hypothetical protein (AHRD V3.3 *-* AT4G33980.2) Solyc10g050223.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc10g050227.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050230.3 665 472 666 544 256 393 378 254 375 512 677 283 834 523 649 Glycoprotein 3-alpha-L-fucosyltransferase (AHRD V3.3 *** Q70FI9_ORYSJ) AT1G49710 Solyc10g050250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain containing protein 52-like (AHRD V3.3 *** XP_004234876.2) Solyc10g050310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SPX domain-containing membrane protein (AHRD V3.3 *-* A0A2G2W3U2_CAPBA) Solyc10g050320.2 7 6 5 1 8 2 0 1 12 8 4 2 4 10 1 Unknown protein Solyc10g050323.1 189 77 21 21 15 9 30 4 106 34 84 59 42 154 102 Transposon, En/Spm-like, Transposase-associated domain protein (AHRD V3.3 *-* A0A2U1N4P4_ARTAN) Solyc10g050325.2 469 197 177 115 44 62 78 12 286 96 368 188 130 351 493 Kinesin-like calmodulin-binding protein (AHRD V3.3 *-* A0A2G3A688_CAPAN) Solyc10g050350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication protein A 70 kDa DNA-binding subunit B (AHRD V3.3 *-* A0A2U1LT37_ARTAN) Solyc10g050370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication protein A 70 kDa DNA-binding subunit (AHRD V3.3 *** A0A1J3GQL6_NOCCA) AT2G05642 Solyc10g050400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication protein A 70 kDa DNA-binding subunit A (AHRD V3.3 *** A0A1J3E159_NOCCA) AT2G05642 Solyc10g050420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* A0A218VZ84_PUNGR) Solyc10g050430.1 335 146 246 671 90 66 77 55 78 103 159 40 237 149 607 transmembrane protein 45B-like (AHRD V3.3 *** A0A2I4GRL3_9ROSI) AT1G49470 Solyc10g050440.2 326 411 506 419 567 601 579 483 417 446 550 439 371 367 440 Unknown protein Solyc10g050445.1 7 0 0 6 0 0 0 1 0 0 0 0 3 0 0 Unknown protein Solyc10g050450.2 34 23 31 31 6 7 7 7 23 18 10 9 34 15 5 Expp1 protein (AHRD V3.3 *** Q8VZ18_ARATH) Solyc10g050453.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3FZ10_COCAP) Solyc10g050457.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050460.1 7 2 0 0 0 0 0 0 0 0 0 0 0 1 16 Unknown protein Solyc10g050470.3 0 2 7 0 0 0 3 1 0 0 0 0 4 0 0 Leucine-rich repeat (AHRD V3.3 *-* A0A200R9L9_9MAGN) Solyc10g050490.1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050500.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Crooked neck-like protein 1 (AHRD V3.3 *-* A0A2G2Y8B4_CAPAN) Solyc10g050510.1 97 67 25 25 0 0 1 0 11 14 2 2 18 10 47 Unknown protein Solyc10g050513.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc10g050517.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc10g050530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc10g050540.2 1333 1467 1252 1281 1547 1459 1430 1332 1267 964 1110 1288 1506 1645 1161 Cleavage stimulation factor subunit 77 (AHRD V3.3 *** A0A1J3CDQ4_NOCCA) AT1G17760 Solyc10g050550.3 4 9 1 3 8 0 3 3 2 7 6 15 0 0 0 la-related protein 6C-like (AHRD V3.3 *** A0A1U7VYA7_NICSY) AT3G19090 Solyc10g050560.1 2 1 0 1 0 0 0 0 0 0 0 0 1 0 0 Unknown protein Solyc10g050570.1 12 13 7 8 18 21 9 14 4 13 0 8 8 13 0 Unknown protein Solyc10g050580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B7R8_ARATH) Solyc10g050590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1Y1HNV9_KLENI) Solyc10g050600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 --* A0A200Q1U4_9MAGN) Solyc10g050610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B7R8_ARATH) Solyc10g050620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 --* AT4G03000.6) Solyc10g050640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050690.2 0 16 19 21 60 48 27 70 8 17 2 16 12 10 0 Cupredoxin (AHRD V3.3 *** A0A2U1P8C5_ARTAN) AT2G15780 Solyc10g050700.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *-* C0LGM1_ARATH) Solyc10g050710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive GH3 product (AHRD V3.3 *** Q05680_SOYBN) Solyc10g050720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050730.2 1 0 0 0 0 2 0 0 0 0 0 0 9 0 0 Cupredoxin (AHRD V3.3 *** A0A2U1P8C5_ARTAN) AT2G15780 Solyc10g150128.1 291 173 153 207 129 148 125 148 150 215 203 197 140 164 198 sodium channel modifier 1-like (AHRD V3.3 *** A0A2I4FVC8_9ROSI) Solyc10g050740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2K3LQB5_TRIPR) Solyc10g050750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin acetylesterase (AHRD V3.3 *** K4D0N0_SOLLC) Solyc10g050770.1 8 4 3 1 8 4 9 5 4 4 10 11 2 4 1 Unknown protein Solyc10g050773.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050777.1 1 5 0 3 0 2 0 0 0 0 1 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) AT4G08430 Solyc10g050840.3 1674 1246 1270 1365 1045 1156 1107 1142 1282 1366 963 1143 1487 1409 1482 Peptidase S9 (AHRD V3.3 *** A0A200PNL2_9MAGN) Solyc10g050850.2 852 630 717 561 428 453 449 497 616 733 626 681 647 531 672 Galactose-1-phosphate uridylyltransferase (AHRD V3.3 *** S8C1H7_9LAMI) AT5G18200 Solyc10g050860.3 4881 3993 4115 3074 2944 2886 2699 2783 2735 2593 2871 2702 3949 3342 4546 DNA-binding protein AY506544 AT3G19130 Solyc10g050870.3 243 269 306 250 321 356 305 250 204 193 341 214 218 269 228 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B1U7_ARATH) Solyc10g050880.2 4 1 5 0 0 0 1 0 2 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KK17_ARTAN) Solyc10g050890.2 592 366 537 548 429 404 388 450 363 367 328 210 1130 499 793 nitrite reductase 2 AT2G15620 Solyc10g050895.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc10g050910.1 133 57 62 102 50 56 60 55 32 47 57 85 48 61 34 Unknown protein Solyc10g050920.2 3 5 0 0 0 0 0 0 0 0 0 0 0 2 0 Unknown protein Solyc10g050940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc10g050950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN) Solyc10g050960.3 2 0 10 0 0 0 0 0 0 0 40 0 1 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2VT25_CAPBA) Solyc10g050970.1 44 47 397 0 0 0 0 0 6 12 924 98 19 10 83 Ethylene Response Factor D.4 AT4G34410 Solyc10g050980.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g050990.2 0 0 0 0 0 1 0 0 0 0 0 1 0 0 2 Unknown protein Solyc10g050993.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MWM3_TRIPR) ATMG00240 Solyc10g150129.1 60 22 91 54 15 37 34 27 14 15 27 27 50 43 55 Unknown protein Solyc10g051010.3 80 50 28 98 46 43 45 78 44 82 16 67 67 78 41 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1J3E260_NOCCA) AT2G15980 Solyc10g051020.2 378 115 64 57 5 5 2 7 7 90 40 5 436 205 105 Cytochrome P450 (AHRD V3.3 *** A0A2U1MAN7_ARTAN) AT3G14690 Solyc10g051030.2 581 570 731 812 539 406 505 492 500 566 806 352 699 542 810 electron transporter%2C putative (Protein of unknown function%2C DUF547) (AHRD V3.3 *** AT5G66600.9) Solyc10g051035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc10g051050.3 255 255 207 288 170 158 166 104 115 208 659 160 233 152 385 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc10g051070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Senescence-specific cysteine protease SAG39 (AHRD V3.3 *-* A0A2G3CBW6_CAPCH) Solyc10g051080.1 22 20 10 21 10 17 20 8 2 19 10 14 12 15 31 Unknown protein Solyc10g051090.3 45 40 215 117 245 207 155 238 59 89 170 361 40 106 15 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc10g051110.1 2902 3215 2583 3370 4112 4237 4691 4121 2907 2957 2591 2842 2120 2316 2840 Protein TIC 62, chloroplastic (AHRD V3.3 *** A0A2G2VT80_CAPBA) AT3G18890 Solyc10g051120.3 4 8 6 4 0 0 5 0 4 8 11 3 6 5 14 Mitochondrial pyruvate carrier (AHRD V3.3 *** A0A2G2WMA1_CAPBA) Solyc10g051125.1 7 17 3 18 3 9 13 2 3 6 20 3 17 25 40 Unknown protein Solyc10g051130.3 70 101 66 45 102 101 72 63 55 62 77 39 84 94 162 Protein DETOXIFICATION (AHRD V3.3 *** A0A200R7E8_9MAGN) Solyc10g051140.3 1407 1061 1384 1265 1222 1502 1530 1255 1033 903 1009 1018 1139 1281 1079 Protein ENHANCED DOWNY MILDEW 2 (AHRD V3.3 *-* A0A2G2YIJ3_CAPAN) Solyc10g051150.3 223 221 171 134 209 172 171 240 269 228 110 183 132 175 83 protein ENHANCED DOWNY MILDEW 2-like (AHRD V3.3 *-* A0A2I4EZI8_9ROSI) Solyc10g051160.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein PP2-B10 (AHRD V3.3 *** A0A2G3BV22_CAPCH) Solyc10g051165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g051170.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN) Solyc10g051180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Late blight resistance protein R1-A (AHRD V3.3 *-* R1A_SOLDE) Solyc10g051200.2 294 227 187 236 207 194 238 180 245 208 140 242 265 231 239 Cytochrome c biogenesis protein CCS1, chloroplastic (AHRD V3.3 *** A0A2G2YKV3_CAPAN) AT1G49380 Solyc10g051210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Oleosin 14.9 kDa (AHRD V3.3 *-* A0A2G3CHZ7_CAPCH) Solyc10g051215.1 17 79 102 169 198 211 172 190 76 72 129 143 21 38 38 E3 ubiquitin-protein ligase ATL9 (AHRD V3.3 *** XP_006429573.2) Solyc10g051220.3 0 1 9 19 6 11 16 13 6 4 7 14 2 4 2 Receptor-like protein kinase (AHRD V3.3 *-* A0A2K3NKJ6_TRIPR) Solyc10g051230.1 8 3 2 1 0 1 0 0 3 10 3 0 2 1 22 LOW QUALITY PROTEIN: receptor-like protein 12 (AHRD V3.3 *-* A0A1U8F0F2_CAPAN) Solyc10g051240.1 3 3 9 6 0 0 1 0 1 3 5 0 3 1 3 receptor-like protein 12 (AHRD V3.3 *-* A0A1U7X977_NICSY) Solyc10g051250.1 12 2 10 9 0 0 2 0 3 6 10 0 2 9 8 receptor-like protein 12 (AHRD V3.3 *-* A0A1U7Y3V9_NICSY) Solyc10g051255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) ATMG00240 Solyc10g051260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g051270.2 624 409 454 424 553 490 408 452 477 635 575 536 555 470 502 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G3D341_CAPCH) Solyc10g150130.1 0 0 0 2 1 0 0 5 0 1 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2Y582_CAPAN) Solyc10g150131.1 0 1 0 1 0 4 2 6 0 0 0 0 1 0 0 Phytochrome A-associated F-box protein (AHRD V3.3 --* A0A2G3CTC4_CAPCH) Solyc10g051300.2 342 388 404 366 389 418 377 312 306 466 403 325 552 461 423 HVA22-like protein (AHRD V3.3 *** A0A2G3BEX4_CAPCH) AT4G36720 Solyc10g051310.2 726 883 1029 989 936 942 1011 820 1043 801 854 925 886 940 1457 clp-like energy-dependent protease AT1G11750 Solyc10g051330.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Protein kinase family protein (AHRD V3.3 *-* E5GBJ3_CUCME) Solyc10g051340.2 1764 2160 1576 1886 2014 2041 2133 2356 1885 1818 1515 1773 2110 1593 1609 Adenylyl cyclase-associated protein (AHRD V3.3 *** A0A2G2VCG1_CAPBA) AT4G34490 Solyc10g051350.2 401 744 797 569 554 584 601 576 771 582 588 669 877 853 710 NADH-quinone oxidoreductase subunit I (AHRD V3.3 *** A0A2W4F7J2_9RHIZ) AT1G79010 Solyc10g051360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tyrosine-protein kinase (AHRD V3.3 *-* A0A2P5EH70_TREOI) Solyc10g051370.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *-* A0A061DZ70_THECC) Solyc10g051373.1 442 181 367 434 296 275 228 165 242 254 313 181 229 282 359 RNA-binding protein (AHRD V3.3 *-* O24106_NICGU) Solyc10g051377.1 1874 2109 3595 2758 1375 1429 1487 1540 3919 1622 2620 2926 3049 3527 2656 RNA-binding protein (AHRD V3.3 *** O24106_NICGU) AT2G21690 Solyc10g052450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052470.1 63 31 50 16 67 73 81 67 76 32 85 64 12 12 48 Protein RADIALIS-like 6 (AHRD V3.3 *** A0A1U8FNU6_CAPAN) AT4G39250 Solyc10g052480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT4G12140 Solyc10g052490.2 24 28 41 79 43 26 7 18 29 49 7 25 4 63 9 Isoflavone reductase homolog (AHRD V3.3 *** IFRH_SOLTU) AT4G39230 Solyc10g052500.2 1 5 1 12 31 19 17 35 13 13 55 41 2 0 0 Isoflavone reductase homolog (AHRD V3.3 *** IFRH_SOLTU) AT4G39230 Solyc10g052510.2 105 145 221 111 183 160 152 184 169 150 132 176 143 154 164 Isoflavone reductase homolog (AHRD V3.3 *** IFRH_SOLTU) AT4G39230 Solyc10g052515.1 2 0 1 4 0 3 6 2 2 3 0 0 1 0 3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VDL0_9ASPA) ATMG00810 Solyc10g052520.2 0 1 1 0 0 0 0 1 2 0 1 4 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* A0A1D6JW74_MAIZE) Solyc10g052530.1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 Small auxin up-regulated RNA72 AT1G29460 Solyc10g052540.1 1 0 2 1 0 0 0 0 1 0 0 0 0 0 0 Small auxin up-regulated RNA73 AT2G21210 Solyc10g052550.1 0 0 0 6 0 0 1 0 0 0 0 6 0 0 0 Small auxin up-regulated RNA74 AT1G29460 Solyc10g052560.1 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 Small auxin up-regulated RNA75 AT1G29460 Solyc10g052565.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR64 (AHRD V3.3 *** A0A2G3B0S5_CAPCH) AT1G29460 Solyc10g052580.3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 Small auxin up-regulated RNA76 AT2G21210 Solyc10g150132.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNG8_9ASPA) ATMG00810 Solyc10g052590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Small auxin up-regulated RNA77 AT1G29460 Solyc10g052600.1 7 11 15 5 0 2 6 3 2 10 1 0 6 7 7 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* Q9M144_ARATH) Solyc10g052603.1 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *-* A0A2U1KTK1_ARTAN) Solyc10g150133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052607.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3DBL0_NOCCA) ATMG00300 Solyc10g052640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 myosin-J heavy chain-like isoform X1 (AHRD V3.3 *-* XP_024926360.1) Solyc10g052660.4 2331 4793 4424 3477 4544 4442 4481 4383 3022 2494 3409 3384 5663 4733 4209 Unknown protein Solyc10g052650.3 364 87 154 84 5 23 2 8 119 55 120 102 61 99 270 F-box family protein (AHRD V3.3 *-* AT2G16365.6) Solyc10g052670.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Low affinity sulfate transporter 3 (AHRD V3.3 *-* A0A2G2VM08_CAPBA) Solyc10g052685.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) AT3G23880 Solyc10g052712.1 300 156 115 168 109 131 137 109 129 168 103 163 105 158 212 Unknown protein Solyc10g052714.1 4 2 13 5 32 16 26 20 10 9 4 12 6 3 0 Unknown protein Solyc10g052716.1 2 6 13 9 33 47 25 46 19 10 7 35 10 13 2 Transposase, MuDR, MULE transposase domain protein (AHRD V3.3 *-* A0A2U1N7R9_ARTAN) Solyc10g052718.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 7 (AHRD V3.3 *-* A0A0C5APX3_HYONI) Solyc10g052810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 sucrose synthase 2-like (AHRD V3.3 --* XP_020242929.1) Solyc10g052813.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052817.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial (AHRD V3.3 *-* A0A2G3AQ73_CAPCH) Solyc10g052823.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052827.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 asparagine-rich protein-like (AHRD V3.3 *-* XP_020397117.1) Solyc10g052843.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052847.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 beta-galactosidase 15-like, partial (AHRD V3.3 --* XP_021846138.1) Solyc10g150134.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g052880.1 807 623 420 345 345 343 258 441 474 1262 465 524 590 298 273 Inactive leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A314LDB3_NICAT) AT1G33590 Solyc10g053880.1 33 30 9 16 14 11 16 17 11 21 14 25 21 18 8 Unknown protein Solyc10g053890.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3B6Y6_CEPFO) Solyc10g053900.2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1QM07_ARTAN) AT2G21540 Solyc10g053910.3 12 32 90 79 48 49 39 27 38 38 95 20 23 32 47 B-cell receptor-associated 31-like (AHRD V3.3 *** A0A200PYT2_9MAGN) Solyc10g053960.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g053970.2 863 1479 1655 1219 1559 1566 1528 1719 1683 1382 1162 1448 1123 1325 1184 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1MGM1_ARTAN) AT2G21520 Solyc10g053980.2 8 0 16 17 0 0 3 0 6 21 9 11 0 1 7 Unknown protein Solyc10g053990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g054010.1 111 342 605 672 163 219 221 98 866 191 477 159 403 364 437 BZIP transcription factor (AHRD V3.3 *** Q8GTZ1_CAPCH) Solyc10g054015.1 0 0 0 1 0 0 0 2 0 0 0 1 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc10g054030.2 1000 638 527 589 430 435 363 397 494 691 559 450 652 562 508 RING/U-box superfamily protein (AHRD V3.3 *** Q8L7K7_ARATH) AT4G39140 Solyc10g054040.3 4 22 69 31 74 92 73 72 40 40 63 38 26 25 48 26S proteasome regulatory subunit (AHRD V3.3 *** A8IR41_CHLRE) Solyc10g054050.3 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 Kinase family protein (AHRD V3.3 *** D7MUJ9_ARALL) AT4G39110 Solyc10g054060.2 395 621 569 487 698 691 635 558 510 399 537 504 728 572 404 Ribosomal protein S21 family protein (AHRD V3.3 *** AT3G26360.2) AT3G26360 Solyc10g054070.1 246 57 161 144 452 270 299 376 225 107 340 209 103 124 237 Protein SHI RELATED SEQUENCE 4 (AHRD V3.3 *** A0A1U8HG71_CAPAN),Pfam:PF05142 Solyc10g054080.3 298 1062 1429 1577 1738 2058 2156 2090 1593 835 1706 1172 727 1178 1553 Kinesin-related protein 11 (AHRD V3.3 *** A0A2G3BDZ7_CAPCH) AT4G39050 Solyc10g054090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 Carboxypeptidase (AHRD V3.3 *-* A0A1U8GE15_CAPAN) Solyc10g054100.3 181 292 184 391 309 343 298 314 237 199 234 239 331 306 860 Protein DETOXIFICATION (AHRD V3.3 *** S8CW50_9LAMI) Solyc10g150135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 --* XP_020962015.1) Solyc10g054130.3 0 0 1 2 0 2 0 0 3 1 0 0 0 0 0 Squalene synthase (AHRD V3.3 *** A0A2G3BW22_CAPCH),Pfam:PF00494 AT4G34640 Solyc10g054170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cell division cycle protein 48-like protein (AHRD V3.3 *-* A0A2G2WIS5_CAPBA) Solyc10g054200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g054203.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication factor-A carboxy-terminal domain protein (AHRD V3.3 *-* A0A2K3NIR6_TRIPR) Solyc10g054207.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g054240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication factor A protein (AHRD V3.3 *-* A0A2K3NDQ8_TRIPR) Solyc10g054270.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication factor A protein 1 (AHRD V3.3 *-* A0A2U1PAC9_ARTAN) Solyc10g054280.2 88 324 288 217 405 299 361 348 250 196 280 297 413 347 188 (DL)-glycerol-3-phosphatase 2 (AHRD V3.3 *** A0A2G3BEV2_CAPCH),Pfam:PF13419 AT4G25840 Solyc10g054290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat-containing protein (AHRD V3.3 *-* A0A103XQF4_CYNCS) Solyc10g054300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GPCR kinase (AHRD V3.3 *-* A0A2P5CHJ2_PARAD) Solyc10g054310.1 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 GPCR kinase (AHRD V3.3 *-* A0A2P5AIX2_TREOI) Solyc10g054320.2 291 241 237 265 289 254 247 245 237 242 341 207 271 285 196 Coiled-coil domain-containing protein 90B, mitochondrial (AHRD V3.3 *** A0A1J3GXX3_NOCCA) AT2G16460 Solyc10g054330.3 1712 1153 1055 1045 857 938 958 968 893 1121 1023 985 982 1063 1315 Zinc finger, CCHC-type (AHRD V3.3 *** A0A2U1NRS2_ARTAN) AT1G75560 Solyc10g054340.1 0 0 1 0 0 0 0 0 3 1 0 1 0 0 0 Fructose-bisphosphate aldolase (AHRD V3.3 *-* F4IGL5_ARATH) Solyc10g054350.2 0 0 3 0 5 1 0 0 0 0 0 5 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1KZM9_ARTAN) Solyc10g054360.1 0 1 0 0 0 0 1 0 4 0 0 0 0 0 0 NBS-LRR resistance-like protein (AHRD V3.3 *-* A0A2U1NK38_ARTAN) Solyc10g054370.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 NBS-LRR resistance protein (AHRD V3.3 *-* A0A2K3P9X0_TRIPR) Solyc10g054380.3 3 2 0 8 0 11 11 5 8 1 1 9 0 0 11 Fructose-bisphosphate aldolase (AHRD V3.3 *-* A0A2G3AH23_CAPAN) Solyc10g054390.3 2 2 1 2 1 2 0 4 4 5 1 8 3 0 0 Fructose-bisphosphate aldolase (AHRD V3.3 *-* Q9SXX5_NICPA) Solyc10g054400.1 49 68 62 70 53 60 65 73 59 45 43 50 71 67 37 Transcription initiation factor IIF, beta subunit (AHRD V3.3 *** A0A2U1P1S9_ARTAN) AT3G52270 Solyc10g054410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 L-ascorbate oxidase-like protein (AHRD V3.3 *-* A0A2G2VIC9_CAPBA) Solyc10g054413.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) ATMG00240 Solyc10g054417.1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 Unknown protein Solyc10g054420.2 563 420 431 326 248 237 239 175 369 319 673 192 227 239 524 PsbP-like protein 2 (AHRD V3.3 *** A0A2U1K9X2_ARTAN) AT2G39470 Solyc10g054440.3 7387 5976 11404 7412 5438 6876 6305 6388 7334 14063 11723 8225 5443 5530 7769 arginine decarboxylase 1 AT4G34710 Solyc10g054450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g054455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g054460.1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A2U1MQE5_ARTAN) Solyc10g054470.1 121 61 70 47 91 85 50 48 32 28 153 77 61 57 113 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A2U1MQE5_ARTAN) Solyc10g054480.3 283 184 269 137 169 135 181 100 165 156 275 167 191 181 201 FAD-binding Berberine family protein (AHRD V3.3 *** A0A2U1MQE5_ARTAN) AT4G20860 Solyc10g054490.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A2U1MQE5_ARTAN) Solyc10g054500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A1P8AT94_ARATH) Solyc10g054510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A2U1MQE5_ARTAN) Solyc10g054520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A2U1MQE5_ARTAN) Solyc10g054530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A2U1MQE5_ARTAN) Solyc10g054540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *-* A0A1P8AT94_ARATH) Solyc10g054550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD-binding Berberine family protein (AHRD V3.3 *** A0A1P8AT94_ARATH) Solyc10g054560.2 925 1762 1984 2339 2008 2188 2475 1651 1383 1154 2182 1376 1935 1522 1705 V-type proton ATPase proteolipid subunit (AHRD V3.3 *** A0A2I4E7G5_9ROSI) Solyc10g054570.2 203 562 586 621 589 573 651 569 547 476 543 460 591 509 509 V-type proton ATPase proteolipid subunit (AHRD V3.3 *** A0A2I4E7G5_9ROSI) Solyc10g054590.2 298 527 585 592 591 571 605 478 485 480 573 488 530 505 537 V-type proton ATPase proteolipid subunit (AHRD V3.3 *** A0A2I4E7G5_9ROSI) Solyc10g054600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-LRR resistance protein (AHRD V3.3 *-* A0A2K3NU03_TRIPR) Solyc10g054610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-LRR resistance protein (AHRD V3.3 *-* A0A2K3PMF0_TRIPR) Solyc10g054620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g054625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g054660.2 253 473 659 535 612 730 708 508 432 441 575 433 566 486 485 Unknown protein Solyc10g054670.3 66 23 10 26 0 1 0 3 14 20 7 7 26 23 25 Unknown protein Solyc10g054673.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Beta-1%2C3-N-Acetylglucosaminyltransferase family protein (AHRD V3.3 *** AT4G32090.1) AT4G32090 Solyc10g054675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc10g054677.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Beta-1%2C3-N-Acetylglucosaminyltransferase family protein (AHRD V3.3 *** AT4G32090.1) AT4G32090 Solyc10g054720.1 19 26 15 24 13 22 14 33 16 59 15 14 34 18 6 Small auxin up-regulated RNA78 AT4G34760 Solyc10g054723.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g054727.1 23 42 78 32 28 43 30 34 33 12 65 32 29 25 50 Unknown protein Solyc10g054730.1 54 106 80 104 108 116 105 123 88 68 79 89 82 78 24 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QQW1_9MAGN) Solyc10g150136.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein SHI RELATED SEQUENCE 1 (AHRD V3.3 --* XP_006590877.2) Solyc10g150137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SAUR-like auxin-responsive protein family (AHRD V3.3 *** Q9SW57_ARATH) AT4G34770 Solyc10g054760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Small auxin up-regulated RNA80 AT2G21210 Solyc10g054770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Small auxin up-regulated RNA81 Solyc10g054780.2 1224 1301 1333 1168 1417 1346 1245 1738 1612 1862 982 1489 2247 1501 1409 Alpha/Beta hydrolase fold protein (AHRD V3.3 *** A0A2U1N7V3_ARTAN) AT5G23530 Solyc10g054790.2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 X-intrinsic protein 1.5 Solyc10g054800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 X-intrinsic protein 1.4 Solyc10g054810.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 X-intrinsic protein 1.3 Solyc10g054820.2 99 190 59 142 16 33 17 14 94 141 30 85 105 50 35 X-intrinsic protein 1.2 Solyc10g054840.2 143 149 89 210 58 55 44 32 104 198 94 129 68 84 96 X-intrinsic protein 1.1 Solyc10g054850.2 90 358 274 390 458 548 509 504 328 298 334 335 459 410 350 Er lumen protein retaining receptor-like protein (AHRD V3.3 *** A0A2K3NRD2_TRIPR) AT4G38790 Solyc10g054860.2 1007 1067 899 732 405 523 676 522 631 491 540 592 964 1255 904 Urb2/Npa2 family protein (AHRD V3.3 *** F4JPJ1_ARATH) AT4G30150 Solyc10g054870.3 11 36 69 12 1 5 3 3 8 21 20 3 7 9 28 Triosephosphate isomerase (AHRD V3.3 *** B6UG30_MAIZE) Solyc10g054880.3 735 1592 1427 1400 1429 1427 1537 1542 1432 1357 1181 1527 1512 1513 1515 Translocon-associated protein subunit alpha (AHRD V3.3 *** A0A2G2YK39_CAPAN) AT2G21160 Solyc10g054900.2 2 5 7 24 0 2 0 2 6 12 12 10 6 2 6 Proline-rich protein (AHRD V3.3 *** Q9M6T7_NICGL) AT4G38770 Solyc10g054910.1 353 940 1135 544 1009 882 854 1088 1581 676 907 1267 1321 1503 554 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2G2W9L6_CAPBA) AT2G16600 Solyc10g054930.2 149 282 283 247 346 320 298 303 211 194 239 252 269 274 246 magnesium transporter NIPA (DUF803) (AHRD V3.3 *** AT4G13800.8) AT2G21120 Solyc10g054940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200QRC8_9MAGN) Solyc10g054950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A328DLS1_9ASTE) Solyc10g054960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tsw (AHRD V3.3 *-* A0A1C9TCM9_CAPCH) Solyc10g054970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200QRC8_9MAGN) Solyc10g054980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A328DLS1_9ASTE) Solyc10g054990.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 14 disease resistance protein At4g27190-like (AHRD V3.3 *-* A0A2I4EJA4_9ROSI) Solyc10g055000.3 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 Dirigent protein (AHRD V3.3 *** K4D193_SOLLC) Solyc10g055010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A328DLS1_9ASTE) Solyc10g055020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A328DLS1_9ASTE) Solyc10g055030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *-* A0A2G3BNZ9_CAPCH) Solyc10g055035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 polycomb group RING finger protein 3-like (AHRD V3.3 *-* XP_019067014.2) Solyc10g055040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** V4M4X9_EUTSA) Solyc10g055050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1P003_ARTAN) Solyc10g055060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pvr4 (AHRD V3.3 *-* A0A1D5AHY8_CAPAN) Solyc10g055070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *-* A0A2G3BNZ9_CAPCH) Solyc10g055080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pvr4 (AHRD V3.3 *-* A0A1D5AHY8_CAPAN) Solyc10g150138.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g055090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** K4D1A2_SOLLC) Solyc10g055100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A328DLS1_9ASTE) Solyc10g055110.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tsw (AHRD V3.3 *-* A0A1C9TCM9_CAPCH) Solyc10g055120.1 7 0 0 0 0 0 0 0 0 0 1 0 0 2 20 NB-ARC domains-containing protein (AHRD V3.3 *-* A0A2U1NDW3_ARTAN) Solyc10g055130.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A2G2ZMJ0_CAPAN) Solyc10g055150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *-* A0A2G3BNZ9_CAPCH) Solyc10g055160.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A328DLS1_9ASTE) Solyc10g055170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200QUI0_9MAGN) Solyc10g055180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tsw (AHRD V3.3 *-* A0A1C9TCM9_CAPCH) Solyc10g055190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** K4D1B2_SOLLC) Solyc10g055193.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** M1DWT6_SOLTU) Solyc10g055197.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** M1BZH9_SOLTU) Solyc10g055200.1 327 460 413 223 169 168 123 104 234 274 291 114 659 656 300 Dirigent protein (AHRD V3.3 *** K4D1B3_SOLLC) Solyc10g055210.3 4 5 15 4 0 3 0 0 7 5 4 3 0 2 0 Dirigent protein (AHRD V3.3 *** K4D1B4_SOLLC) Solyc10g055230.1 61 65 64 86 48 39 27 28 86 58 95 41 62 34 31 Dirigent protein (AHRD V3.3 *** K4D1B5_SOLLC) Solyc10g055240.2 1171 1252 939 1076 1644 1559 1528 1348 1707 1821 1431 1202 1049 659 1484 1-phosphatidylinositol phosphodiesterase (AHRD V3.3 *** E5GC05_CUCME) AT4G38690 Solyc10g055250.1 9 38 81 15 67 42 26 44 20 26 42 53 15 19 1 Cold-shock protein (AHRD V3.3 *-* A0A200RAC1_9MAGN) Solyc10g055260.2 30 181 129 246 228 194 200 168 161 74 102 131 49 152 74 Auxin transporter-like protein 3 (AHRD V3.3 *** A0A2G2W9H7_CAPBA) AT2G21050 Solyc10g055265.1 0 0 0 4 4 1 3 1 0 0 0 0 0 0 0 Unknown protein Solyc10g055280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A199UDV1_ANACO) Solyc10g055300.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LRR receptor-like serine/threonine-protein kinase EFR (AHRD V3.3 *-* A0A2G2X820_CAPBA) Solyc10g055310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* A0A199UDV1_ANACO) Solyc10g055330.3 0 0 0 0 0 0 2 0 0 1 1 0 0 0 0 Unknown protein Solyc10g055350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g055360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBP1-associated protein 2A (AHRD V3.3 *-* A0A1J3DCP3_NOCCA) Solyc10g055370.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Endo-1,4-beta-xylanase (AHRD V3.3 *** A0A1J3CP06_NOCCA) Solyc10g055375.1 16 12 19 5 27 30 23 23 31 32 9 27 12 12 38 Unknown protein Solyc10g055390.2 123 231 503 331 225 257 250 254 298 343 392 425 293 481 294 Major facilitator superfamily protein (AHRD V3.3 *** Q9SW40_ARATH) AT4G34950 Solyc10g055400.1 948 853 474 1558 694 518 726 749 332 1025 499 622 550 734 326 Unknown protein Solyc10g055410.2 190 148 145 143 132 147 72 93 151 166 227 97 134 159 334 R2R3MYB transcription factor 32 AT4G38620 Solyc10g055420.2 1 16 14 8 8 3 5 0 21 7 10 5 1 10 3 Unknown protein Solyc10g055423.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *-* A0A2G2Z378_CAPAN) Solyc10g055427.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *-* A0A2U1LVQ4_ARTAN) AT2G07505 Solyc10g055450.2 3023 2581 2932 2899 2856 3226 3258 3395 3534 3595 2535 3244 2492 3149 2745 E3 ubiquitin-protein ligase UPL3 (AHRD V3.3 *** A0A2G3ATT0_CAPCH) AT4G38600 Solyc10g055460.2 59 41 15 34 21 9 28 24 31 39 26 34 21 24 20 Unknown protein Solyc10g055470.2 0 39 115 3 0 0 16 7 0 1 2 1 1 0 0 Beta-galactosidase (AHRD V3.3 *** A0A2G3BEC1_CAPCH) AT2G16730 Solyc10g055540.2 162 163 196 252 227 282 244 176 135 152 210 181 150 174 241 Dimer_Tnp_hAT domain-containing protein (AHRD V3.3 *** A0A1Q3CIR7_CEPFO) Solyc10g055545.1 21 6 6 11 16 33 18 5 7 12 14 18 15 9 4 Rac-like GTP binding protein (AHRD V3.3 *-* Q9S821_PHYPA) Solyc10g055550.3 5 0 1 3 0 1 2 1 7 0 0 0 0 0 1 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *-* A0A1Y1IM66_KLENI) AT2G16770 Solyc10g055560.2 89 179 202 114 256 282 196 284 174 122 254 256 447 178 120 SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** A0A2U1N6W4_ARTAN) AT4G35070 Solyc10g055570.3 0 0 0 0 0 0 0 0 0 127 0 0 0 0 18 SKP1-like protein (AHRD V3.3 *** Q84UV6_NICBE) Solyc10g055580.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SKP1-like protein (AHRD V3.3 *** O82463_NICCL) AT5G42190 Solyc10g055590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SKP1-like protein (AHRD V3.3 *** Q84UV6_NICBE) Solyc10g055593.1 61 60 29 47 14 52 33 30 39 54 68 42 39 21 27 heparan-alpha-glucosaminide N-acetyltransferase-like (AHRD V3.3 *-* A0A2I4EWQ3_9ROSI) Solyc10g055597.1 179 95 143 122 67 59 71 57 87 74 154 101 49 96 79 SKP1-like protein (AHRD V3.3 *** O82463_NICCL) Solyc10g055620.2 339 233 352 398 173 157 171 118 317 260 304 256 241 228 203 heparan-alpha-glucosaminide N-acetyltransferase-like (AHRD V3.3 *** A0A2I4EWQ3_9ROSI) Solyc10g055630.2 4405 9236 10151 10554 12224 12513 10224 14752 7916 10440 7522 12290 3999 6022 3593 plasma membrane intrinsic protein 2.9 AT4G35100 Solyc10g055640.2 1337 1073 1155 1157 1075 978 949 953 1114 989 1312 1072 1344 943 1218 Pre-mRNA-splicing factor syf2 (AHRD V3.3 *** A0A1J3CRD6_NOCCA) AT2G16860 Solyc10g055650.2 1650 1200 1848 1575 1373 1522 1393 1135 1231 1676 1499 1434 1164 1245 1113 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1M4W5_ARTAN) AT4G38520 Solyc10g055655.1 12 26 15 19 26 51 19 33 4 12 35 40 32 25 28 Unknown protein Solyc10g055670.2 2588 2565 1892 2341 2012 2187 2015 2217 1847 2112 1689 1816 2129 1934 1952 Vacuolar ATP synthase subunit B (AHRD V3.3 *** A0A2P6TTB9_CHLSO) AT4G38510 Solyc10g055680.1 262 198 143 307 112 111 74 68 102 96 135 46 353 162 173 Methyltransferase (AHRD V3.3 *** O24153_TOBAC) AT1G20330 Solyc10g055685.1 0 0 0 0 0 0 0 1 0 1 0 3 0 0 0 Plant mobile domain protein family (AHRD V3.3 *-* A0A1D6NQG9_MAIZE) Solyc10g055700.2 277 292 224 294 313 305 288 294 257 288 205 225 227 248 189 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2YL01_CAPAN) AT2G17033 Solyc10g055710.2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Mechanosensitive ion channel protein (AHRD V3.3 *** A0A2G2VT06_CAPBA) AT1G78610 Solyc10g055720.2 1562 1134 925 1133 941 1012 892 1085 1278 1387 1179 944 1177 1023 819 MAP kinase kinase kinase 75 AT4G38470 Solyc10g055725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc10g055730.3 0 51 25 24 23 16 18 20 34 17 37 32 8 13 6 HXXXD-type acyl-transferase family protein (AHRD V3.3 *-* A0A2K3L8P7_TRIPR) Solyc10g055740.2 257 196 171 74 32 8 34 12 48 263 203 14 637 151 123 lysine histidine transporter-like 8 (AHRD V3.3 *** A0A2I4HTG9_9ROSI) Solyc10g055750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 lysine histidine transporter-like 8 (AHRD V3.3 *** A0A2I4HCL9_9ROSI) Solyc10g055760.2 1582 626 1265 388 30 39 40 42 247 814 1752 118 1518 782 658 NAC domain-containing protein 2 (AHRD V3.3 *** A0A1U8EDX1_CAPAN) AT2G17040 Solyc10g055770.2 41 269 157 266 233 305 241 260 305 266 247 306 256 207 154 Major facilitator superfamily (AHRD V3.3 *** A0A2U1P5G0_ARTAN) Solyc10g055780.1 1050 606 1441 1552 133 119 140 63 569 744 1333 943 1049 1070 1154 Chitinase (AHRD V3.3 *** B9VRK7_CAPAN) Solyc10g055790.1 222 128 172 275 14 17 28 19 105 155 161 188 113 127 125 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc10g055800.2 10272 5064 5838 6915 73 55 66 72 1810 5450 3896 1118 7264 7580 12807 Chitinase (AHRD V3.3 *** B9VRK7_CAPAN) AT3G12500 Solyc10g055810.2 17686 5785 7962 9282 216 183 208 222 4126 8879 10095 2554 6779 5245 12411 chitinase Z15140 AT3G12500 Solyc10g055820.3 251 34 82 258 3 0 1 1 20 38 46 13 97 91 527 Chitinase (AHRD V3.3 *** B9VRK7_CAPAN) AT3G12500 Solyc10g068350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc10g068355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc10g073350.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *-* A0A1U8GIG3_CAPAN) Solyc10g073353.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc10g073357.1 3 4 4 13 61 43 40 34 10 12 3 9 4 8 0 Exocyst complex component SEC3A (AHRD V3.3 *-* A0A2G2VHQ3_CAPBA) Solyc10g074360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc10g074370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (AHRD V3.3 *-* A0A1U8GIG3_CAPAN) Solyc10g074380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc10g074390.1 1 0 10 1 0 0 0 0 0 2 0 0 0 0 0 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc10g074400.3 1 0 0 0 0 0 0 1 0 1 0 0 4 0 0 Chitinase (AHRD V3.3 *-* B9VRK7_CAPAN) Solyc10g074430.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication protein A 70 kDa DNA-binding subunit (AHRD V3.3 *** A0A2K3PIN6_TRIPR) AT2G05642 Solyc10g074433.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MUF3_TRIPR) Solyc10g074437.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g074440.2 640 1687 1210 861 763 687 579 991 3085 2410 1744 779 2173 730 365 Chitinase (AHRD V3.3 *** B9VRK7_CAPAN) AT3G12500 Solyc10g074443.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 low-molecular-weight cysteine-rich 22 (AHRD V3.3 -** AT4G29280.1) AT5G48905 Solyc10g074447.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 low-molecular-weight cysteine-rich 21 (AHRD V3.3 *** AT4G29283.1) AT4G29283 Solyc10g074450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g074460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitinase (AHRD V3.3 *** B9VRK7_CAPAN) Solyc10g074465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 low-molecular-weight cysteine-rich 21 (AHRD V3.3 *** AT4G29283.1) AT4G29283 Solyc10g074470.3 487 740 654 686 1071 997 1028 1181 984 780 706 894 654 616 652 DUF630 family protein, putative (DUF630 and DUF632) (AHRD V3.3 *** Q9XI02_ARATH) AT4G35240 Solyc10g074475.1 4 6 3 1 0 0 2 0 2 1 1 0 4 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc10g074490.3 0 6 0 0 0 1 2 0 1 0 0 0 0 0 0 O-fucosyltransferase family protein (AHRD V3.3 *** A0A061DZG6_THECC) Solyc10g074500.2 2458 2538 2560 3375 2508 2413 2688 2496 2082 2965 2378 2049 3089 2440 2315 mitochondrial NAD-dependent isocitrate dehydrogenase AT4G35260 Solyc10g074530.2 200 139 259 226 188 273 269 194 226 224 266 200 129 205 291 SEC1 family transport protein SLY1 (AHRD V3.3 --* XP_006486614.1) Solyc10g074540.1 321 869 2028 830 707 876 1154 489 1772 393 2030 985 480 720 370 Protein EXORDIUM-like 3 (AHRD V3.3 *** A0A1U8DVK9_CAPAN) AT2G17230 Solyc10g074550.3 3 7 3 4 0 1 0 0 4 3 2 2 1 2 10 Unknown protein Solyc10g074560.2 888 1240 876 816 909 889 817 1122 677 683 659 873 1384 1260 823 nucleolar complex protein 4 homolog (AHRD V3.3 *** A0A2I4GCB9_9ROSI) AT2G17250 Solyc10g074570.2 691 853 1073 816 1082 1028 908 1152 925 1083 911 883 1076 974 652 Calcium dependent protein kinase (AHRD V3.3 *** Q43676_VIGRR) AT2G17290 Solyc10g074580.2 480 387 416 395 334 247 278 341 461 425 455 396 418 436 424 glycerol kinase (AHRD V3.3 *** AT4G38225.3) AT4G38225 Solyc10g074590.2 1887 1836 1691 1531 1916 1638 1238 1682 2099 1847 1536 1812 2126 1901 1876 Pantothenate kinase (AHRD V3.3 *** A0A178VSI6_ARATH) AT4G35360 Solyc10g074600.3 43 41 114 59 54 63 85 53 43 30 52 45 57 87 81 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200PR59_9MAGN) Solyc10g074610.3 98 111 162 53 80 84 85 105 82 65 78 83 99 107 98 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200PR59_9MAGN) Solyc10g074620.3 0 7 10 1 0 0 2 0 0 0 0 0 0 0 0 Cellulose synthase (AHRD V3.3 *** A0A200PS93_9MAGN) AT4G38190 Solyc10g074630.3 22 28 34 26 40 24 26 42 33 47 20 34 35 26 16 ADP-ribosylation factor-like protein (AHRD V3.3 *** L0L5I8_MEDSF) AT5G52210 Solyc10g074640.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200QUG5_9MAGN) Solyc10g074643.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ADP-ribosylation factor-like protein (AHRD V3.3 *** L0L5I8_MEDSF) AT5G52210 Solyc10g074647.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g074650.2 348 547 446 350 471 424 448 560 622 514 418 544 430 515 465 Hexosyltransferase (AHRD V3.3 *** A0A2G2VT42_CAPBA) AT2G38650 Solyc10g074680.2 1103 1765 1451 1906 2094 1959 1709 2685 2043 1417 1204 2343 1160 1600 849 Protein SCARECROW (AHRD V3.3 *** A0A2G3BEK7_CAPCH) AT3G54220 Solyc10g074690.2 1613 1544 1505 1667 2116 2012 2038 2004 1718 1879 1229 1626 2091 1588 1239 retinal-binding protein (AHRD V3.3 *** AT5G01010.5) AT5G01010 Solyc10g074700.2 749 1219 1310 1257 1628 1590 1728 1369 1141 819 1089 1219 1459 1339 1118 Ethanolamine-phosphate cytidylyltransferase (AHRD V3.3 *** A0A2G2YKZ4_CAPAN) AT2G38670 Solyc10g074710.2 927 1703 2331 1892 2498 2750 2257 2283 1989 1501 2146 1959 1639 1664 2014 Serine/threonine-protein kinase (AHRD V3.3 *** A0A1U8ED99_CAPAN) AT5G01020 Solyc10g074720.3 67 368 403 526 901 688 797 813 413 325 343 534 139 282 185 B1-type cyclin dependent kinase AT2G38620 Solyc10g074730.3 7 2 1 17 0 0 3 0 0 6 18 3 20 19 21 Late embryogenesis abundant protein, LEA-14 (AHRD V3.3 *** A0A2U1LR39_ARTAN) Solyc10g074740.2 654 437 772 320 153 164 143 158 309 366 1068 295 473 456 1006 Calcium-binding protein CAST (AHRD V3.3 *** A0A1U8EHD5_CAPAN) AT4G20780 Solyc10g074750.1 90 67 41 67 54 55 69 63 45 59 33 49 61 49 44 Unknown protein Solyc10g074780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aspartic proteinase-like protein 2 (AHRD V3.3 *-* A0A1J6IK01_NICAT) Solyc10g074785.1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 Unknown protein Solyc10g074790.2 1781 1375 1394 1664 784 811 861 730 1352 1657 1756 1417 1710 1575 2064 Auxin efflux carrier family protein (AHRD V3.3 *** A0A2K3N023_TRIPR) AT5G01990 Solyc10g074800.3 2 1 2 5 2 7 1 4 6 0 2 0 3 2 0 Tropomyosin (AHRD V3.3 *** Q9C8R6_ARATH) AT1G30050 Solyc10g074810.2 1654 833 1358 1305 927 1021 1120 750 927 1172 1438 1036 863 1166 1608 RING/U-box superfamily protein (AHRD V3.3 *** Q8L610_ARATH) AT5G01960 Solyc10g074820.1 167 402 479 512 585 785 744 523 419 323 681 384 387 351 453 DUF1191 domain-containing protein (AHRD V3.3 *** A0A1Q3BAW9_CEPFO) AT3G08600 Solyc10g074822.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ER-based factor for assembly of V-ATPase (AHRD V3.3 *-* AT5G52980.1) Solyc10g074824.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc10g074826.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g074828.1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc10g074850.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Organic cation/carnitine transporter (AHRD V3.3 *-* A0A2K3MXI9_TRIPR) Solyc10g074860.2 618 713 983 966 943 1130 960 849 777 610 987 803 811 829 794 Unknown protein Solyc10g074870.2 177 376 284 335 199 237 250 175 353 200 407 149 353 427 556 KH domain-containing protein (AHRD V3.3 *** A0A2G2VT48_CAPBA) AT2G38610 Solyc10g074880.3 391 899 649 1031 753 685 633 637 615 554 513 559 1217 1137 1211 protein RETICULATA-RELATED 3, chloroplastic-like (AHRD V3.3 *** A0A2I4E4T7_9ROSI) Solyc10g074890.2 4309 1356 695 714 430 329 327 461 1072 1604 852 864 707 1033 846 Protein kinase domain (AHRD V3.3 *** A0A200QIC0_9MAGN) AT5G01950 Solyc10g074900.2 282 302 254 458 381 407 414 364 296 260 393 349 296 403 407 GPCR kinase (AHRD V3.3 *** A0A2P5CHJ2_PARAD) Solyc10g074910.2 280 340 366 285 253 250 246 230 276 236 411 256 299 286 385 Acetyltransferase NSI (AHRD V3.3 *** NSI_ARATH) AT1G32070 Solyc10g074920.2 39 111 102 208 115 114 152 74 116 160 274 63 23 81 314 Mannan endo-1,4-beta-mannosidase (AHRD V3.3 *** A0A2K3PQN7_TRIPR) AT5G01930 Solyc10g074930.1 1153 2173 981 1036 1501 1774 1482 1493 1244 1068 1012 1065 1245 1255 988 Ribosomal protein S6 kinase (AHRD V3.3 *** A0A1W1EMP4_SOLTU) AT3G08720 Solyc10g074940.2 1664 1594 2039 2111 1669 2068 2246 1821 1769 1711 1868 1440 1600 1721 1876 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A2G2YKN5_CAPAN) Solyc10g074950.2 49 28 107 152 14 13 4 7 28 18 32 1 86 49 145 DUF599 domain-containing protein (AHRD V3.3 *** A0A1Q3BQP7_CEPFO) AT5G43180 Solyc10g074970.1 982 486 437 440 437 434 346 538 616 794 348 722 591 501 445 Transmembrane receptor (AHRD V3.3 *** A0A200Q182_9MAGN) AT1G61670 Solyc10g074980.2 2971 2676 2028 2292 2312 2221 2056 2484 2691 3019 2142 3122 3238 2664 2544 Vacuolar sorting receptor protein (AHRD V3.3 *** C6KI57_LILLO) AT3G52850 Solyc10g074990.2 1228 596 503 556 514 404 443 548 537 908 507 580 874 644 319 Holliday junction resolvase-like protein (AHRD V3.3 *** A0A2K3NCX3_TRIPR) AT3G52905 Solyc10g075000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *-* A0A2R6R8M4_ACTCH) Solyc10g075010.2 19 11 34 31 18 9 8 13 18 7 20 38 24 18 16 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) AT3G23880 Solyc10g075020.3 185 566 514 486 562 532 597 505 475 309 362 434 530 587 501 Elongation factor P (AHRD V3.3 *** A0A2G2YL80_CAPAN) AT3G08740 Solyc10g075030.3 2858 1590 1233 1355 873 830 937 969 1346 1279 1054 967 1395 1565 1680 B3 domain-containing protein (AHRD V3.3 *** A0A2G3BDR8_CAPCH) AT4G32010 Solyc10g075040.3 1054 896 868 793 803 792 750 800 956 937 1002 867 948 834 841 Protein kinase 2A (AHRD V3.3 *** A0A2K3PLQ7_TRIPR) AT3G08760 Solyc10g075050.2 30 150 272 182 335 352 365 354 155 102 336 243 95 254 43 Non-specific lipid-transfer protein (AHRD V3.3 *** K4D1U7_SOLLC) AT2G38540 Solyc10g075060.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** K4D1U8_SOLLC) AT2G38540 Solyc10g075065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g075070.3 10423 6331 7430 9066 225 292 179 150 5872 4419 10114 4675 11362 10215 31356 Non-specific lipid-transfer protein (AHRD V3.3 *** K4D1U9_SOLLC) AT2G38540 Solyc10g075080.1 0 0 1 5 6 5 0 1 1 5 0 1 0 0 0 Heme oxygenase 4, chloroplastic (AHRD V3.3 *-* A0A2G2YVP7_CAPAN) Solyc10g075090.3 0 0 0 1 0 0 0 0 0 0 0 0 0 1 13 Non-specific lipid-transfer protein (AHRD V3.3 *** K4D1V1_SOLLC) AT2G38540 Solyc10g075100.2 10 4 30 24 15 8 8 5 10 9 47 17 14 38 49 Non-specific lipid-transfer protein (AHRD V3.3 *** Q4A1N1_SOLLC) AT2G38540 Solyc10g075103.1 28 18 23 26 1 0 1 0 9 7 24 6 22 34 220 Non-specific lipid-transfer protein (AHRD V3.3 *** K4D1V1_SOLLC) AT2G38540 Solyc10g075107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** Q4A1N1_SOLLC) AT2G38540 Solyc10g075110.2 1469 1034 2118 8776 20 39 33 29 6988 2829 1030 798 4282 4930 8217 Non-specific lipid-transfer protein (AHRD V3.3 *** M1AVB9_SOLTU) AT2G38540 Solyc10g075111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AP-2 complex subunit alpha (AHRD V3.3 *-* A0A1U8FDY2_CAPAN) Solyc10g075112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3JJ83_COCAP) Solyc10g075114.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 purine permease 1-like (AHRD V3.3 *-* A0A1S4AAJ7_TOBAC) Solyc10g075116.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4D1W4_SOLLC) Solyc10g075118.1 5 9 13 22 1 11 0 5 18 4 5 0 6 6 23 Non-specific lipid-transfer protein (AHRD V3.3 *** K4D1W2_SOLLC) AT2G38540 Solyc10g075150.2 4134 1880 718 2309 0 1 0 0 85 1320 342 30 4351 5216 7043 Non-specific lipid-transfer protein (AHRD V3.3 *** A0A2G2YKI8_CAPAN) AT2G38540 Solyc10g075160.1 643 1062 608 739 2170 2605 1601 2534 1699 2192 917 2158 673 347 442 Ferredoxin (AHRD V3.3 *** K4D1V7_SOLLC) AT1G60950 Solyc10g075170.3 1 5 0 5 9 2 4 2 4 0 2 17 6 2 0 Aspartate aminotransferase (AHRD V3.3 *** A0A2G2VSJ3_CAPBA) Solyc10g075173.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HMG-Y-related protein A-like (AHRD V3.3 *** XP_010312913.1) Solyc10g150139.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HMG-Y-related protein A-like (AHRD V3.3 *-* XP_010312916.1) Solyc10g075177.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc10g076180.1 894 807 328 1482 553 417 377 360 652 2516 277 320 3134 924 1083 ovate family protein 20 Solyc10g076190.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4D1W1_SOLLC) Solyc10g076200.3 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Non-specific lipid-transfer protein (AHRD V3.3 *** K4D1W2_SOLLC) AT2G38540 Solyc10g076210.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4D1W3_SOLLC) Solyc10g076220.3 0 0 1 1 0 0 1 2 1 0 1 0 0 0 0 Peroxidase (AHRD V3.3 *** K4D1W4_SOLLC) Solyc10g076230.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4D1W1_SOLLC) Solyc10g076240.3 20 2 6 13 0 1 1 1 0 2 3 0 3 24 58 Peroxidase (AHRD V3.3 *** K4D1W6_SOLLC) Solyc10g076245.1 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 Peroxidase (AHRD V3.3 *** M1BV77_SOLTU) Solyc10g076250.2 736 628 392 604 478 448 522 476 847 1088 495 722 468 744 1261 Alanine--glyoxylate aminotransferase 2 (AHRD V3.3 *** B6U6Q5_MAIZE) AT3G08860 Solyc10g076260.2 490 543 375 534 415 424 622 470 519 405 253 383 342 622 491 Regulatory-associated protein of TOR 1 (AHRD V3.3 *** A0A2G3BLG9_CAPCH) Solyc10g076270.3 1486 1426 1573 1637 1187 1487 1597 974 863 944 1089 939 1073 1600 1563 Regulatory-associated protein of TOR 1 (AHRD V3.3 *-* A0A2G2VZ40_CAPBA) Solyc10g076280.3 21 16 4 18 13 11 18 18 9 19 14 10 20 30 20 Solute carrier family 40 protein (AHRD V3.3 *** A0A2G3BE97_CAPCH) AT5G03570 Solyc10g076290.2 677 450 522 627 207 206 245 225 238 350 375 302 579 399 640 F-box/LRR-repeat protein 3 (AHRD V3.3 *** A0A2G2YKP8_CAPAN) AT5G01720 Solyc10g076300.2 79 45 57 52 24 22 21 15 25 34 65 21 66 57 66 CASP-like protein (AHRD V3.3 *** A0A1Q3C9H0_CEPFO) AT2G38480 Solyc10g076320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1PSV9_ARTAN) AT5G01700 Solyc10g076330.3 0 0 0 0 1 4 0 1 2 0 0 1 4 1 0 Dcd (Development and cell death) domain protein (AHRD V3.3 *-* A0A2K3N0H5_TRIPR) Solyc10g076340.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dcd (Development and cell death) domain protein (AHRD V3.3 *-* A0A2K3N0H5_TRIPR) Solyc10g076350.2 508 1279 1777 1661 2355 2403 2360 2062 1291 1255 1692 1676 1309 1266 1300 Macrophage migration inhibitory factor (AHRD V3.3 *** A0A2U1PAA1_ARTAN) AT5G01650 Solyc10g076355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g076360.1 1269 1549 1344 2705 1490 1177 1494 1748 1164 2620 1422 1657 1403 1023 738 PRA1 family protein (AHRD V3.3 *** A0A2G3BEF0_CAPCH) AT2G38360 Solyc10g076370.3 0 1 1 3 0 0 2 1 0 2 0 0 3 0 0 Dehydration-responsive element-binding protein 2A (AHRD V3.3 *** A0A2G2YL04_CAPAN) Solyc10g076380.2 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 Dehydration responsive element binding transcription factor (AHRD V3.3 *-* W6FJ00_9ROSA) AT2G38340 Solyc10g076390.2 5 18 4 10 2 3 2 2 1 0 4 0 0 3 0 BES1/BZR1-like protein 1 (AHRD V3.3 *** A0A2G3BEC2_CAPCH) Solyc10g076400.2 2 24 22 19 45 38 23 25 8 5 15 21 7 15 2 Protein trichome birefringence-like 34 (AHRD V3.3 *** A0A1U8F2S8_CAPAN) Solyc10g076405.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc10g076410.1 326 393 496 205 122 121 111 80 598 118 415 36 188 273 96 Abscisic acid receptor PYL6 (AHRD V3.3 *** A0A2G3BE77_CAPCH) AT2G38310 Solyc10g076415.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) ATMG00240 Solyc10g076420.2 422 529 665 506 605 539 515 479 529 422 591 421 596 714 519 hypothetical protein (Protein of unknown function%2C DUF538) (AHRD V3.3 *** AT3G08890.2) AT3G08890 Solyc10g076430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase/pectinesterase inhibitor PPE8B (AHRD V3.3 *-* A0A2G3AHQ8_CAPAN) Solyc10g076435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc10g076440.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1P5P8_ARTAN) AT1G12210 Solyc10g076450.2 85 141 250 164 165 242 217 176 186 127 171 152 159 211 228 Ethylene-overproduction protein 1 (AHRD V3.3 *** A0A2G3BE73_CAPCH) AT3G51770 Solyc10g076460.2 23 9 19 13 0 0 0 0 6 0 11 0 5 9 6 Homeodomain-like superfamily protein (AHRD V3.3 *-* Q9SIZ5_ARATH) AT2G38300 Solyc10g076480.2 43 41 18 22 0 2 4 6 24 28 79 2 53 44 10 Ammonium transporter (AHRD V3.3 *** A0A2G2VSP2_CAPBA) AT2G38290 Solyc10g076490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: receptor-like protein 12 (AHRD V3.3 *-* A0A1U7W407_NICSY) Solyc10g076500.3 52 41 110 70 3 7 8 13 79 131 229 25 70 34 37 receptor-like protein 12 (AHRD V3.3 *-* A0A1S4CLL9_TOBAC) Solyc10g076510.2 584 851 1128 997 1467 1386 1270 1663 909 1515 1294 1232 1735 933 584 Pyruvate decarboxylase (AHRD V3.3 *** Q8H9C6_SOLTU) AT4G33070 Solyc10g076515.1 17 21 27 27 49 30 41 20 22 14 25 36 17 20 2 Unknown protein Solyc10g076530.2 2 10 14 9 17 12 11 5 15 9 18 14 6 4 8 Protein kinase domain (AHRD V3.3 *-* A0A200Q5X3_9MAGN) AT1G21270 Solyc10g076540.1 254 203 493 183 10 9 11 18 53 173 170 20 608 166 205 Wall-associated receptor kinase-like 9 (AHRD V3.3 *-* A0A2G2VF42_CAPBA) Solyc10g076550.1 391 267 216 166 14 18 20 26 97 313 91 31 793 170 44 Wall-associated receptor kinase 1 (AHRD V3.3 *-* A0A2G2Y6I2_CAPAN) Solyc10g076560.1 2 4 2 0 0 0 3 2 0 1 0 5 13 2 0 Wall-associated receptor kinase 1 (AHRD V3.3 *-* A0A2G2Y6I2_CAPAN) Solyc10g076565.1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc10g076570.2 4 15 10 18 12 5 2 9 8 0 7 6 2 13 0 Protein trichome birefringence-like 3 (AHRD V3.3 *** A0A1U8EDH5_CAPAN) AT5G01360 Solyc10g076580.1 109 97 103 82 83 74 59 90 147 118 99 109 99 121 56 Phosphoinositide phosphatase SAC8 (AHRD V3.3 *** A0A2G2YLP1_CAPAN) Solyc10g076590.3 1095 903 1094 923 814 1031 1019 828 907 739 972 780 993 954 1186 Phosphoinositide phosphatase SAC8 (AHRD V3.3 *** A0A2G2VSN5_CAPBA) Solyc10g076600.2 648 692 768 724 1139 1093 1122 1381 1323 941 662 1021 737 781 496 Acyl-CoA oxidase/dehydrogenase (AHRD V3.3 *** A0A200PWV2_9MAGN) AT3G51840 Solyc10g076610.2 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 lysyl-tRNA synthetase Solyc10g076640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200R9I1_9MAGN) Solyc10g076620.1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 Unknown protein Solyc10g076630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FC (AHRD V3.3 *-* A0A0C5APX0_HYONI) Solyc10g150140.1 1 5 7 5 2 2 0 0 0 7 0 4 0 2 0 Unknown protein Solyc10g076650.3 3 1 0 3 0 0 1 0 0 3 17 1 0 0 0 BnaA10g16890D protein (AHRD V3.3 *** A0A078HM74_BRANA) Solyc10g076660.2 0 103 13 16 17 9 9 6 98 71 119 50 4 12 13 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4J670_ARATH) Solyc10g076670.3 0 7 1 2 0 0 1 1 80 191 231 6 4 4 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4J670_ARATH) Solyc10g076690.2 592 580 708 725 668 761 679 624 521 547 783 536 634 669 784 PHD finger protein ALFIN-LIKE 1 (AHRD V3.3 *** A0A2G2YKZ5_CAPAN) AT5G05610 Solyc10g076700.2 92 92 230 257 247 221 209 213 166 227 262 241 63 127 152 Rhodanese-like domain-containing protein 10 (AHRD V3.3 *** A0A1U8EI03_CAPAN) AT3G08920 Solyc10g076710.3 806 856 1038 1110 513 417 398 568 2160 1379 1162 1469 1521 1102 1435 Phosphoinositide phospholipase C (AHRD V3.3 *** O49950_SOLTU) Solyc10g076720.2 11 23 20 40 82 59 50 88 48 18 36 31 27 15 71 glycine-rich protein DOT1-like (AHRD V3.3 *-* XP_019071531.1) Solyc10g076730.1 35 174 81 218 241 273 261 211 165 50 129 152 184 242 462 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A061E7V9_THECC) AT1G14890 Solyc10g076740.3 290 283 237 459 236 295 308 254 232 237 220 166 248 143 496 GDSL esterase/lipase CPRD49 (AHRD V3.3 *-* A0A1U8E6E5_CAPAN) Solyc10g076750.2 154 126 194 209 232 295 286 258 142 189 213 203 142 115 192 Protein yippee-like (AHRD V3.3 *** A0A2G2VTD2_CAPBA) AT3G08990 Solyc10g076760.3 484 274 461 348 109 119 79 60 244 307 319 270 258 327 516 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1LJI2_ARTAN) AT3G09010 Solyc10g076770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g076780.1 19 4 0 9 0 0 0 0 2 4 11 3 0 8 13 Alpha 1,4-glycosyltransferase family protein (AHRD V3.3 *** F4IS00_ARATH) AT2G38150 Solyc10g076790.2 114 224 334 296 495 430 362 420 243 295 256 213 127 168 173 Auxin transporter-like protein 1 (AHRD V3.3 *** A0A2G2YL11_CAPAN) AT2G38120 Solyc10g076800.2 444 386 387 340 198 316 246 286 272 334 233 289 434 359 351 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (AHRD V3.3 *** A0A1U8EFN6_CAPAN) AT2G40190 Solyc10g076810.1 60 55 56 51 53 40 41 50 55 50 63 38 59 41 59 3'-5' exonuclease domain (AHRD V3.3 *** A0A200QBM5_9MAGN) Solyc10g076820.2 4 35 35 37 7 1 5 7 21 15 20 20 31 8 7 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G3BF07_CAPCH) AT2G38090 Solyc10g076830.2 0 11 10 1 1 2 1 3 5 11 0 7 2 16 11 Laccase (AHRD V3.3 *** K4D225_SOLLC) AT2G38080 Solyc10g076840.2 568 397 325 376 211 104 113 96 417 486 430 323 615 429 689 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9XIA5_ARATH) AT5G20400 Solyc10g076850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g076860.2 377 401 465 396 461 479 506 520 399 433 402 415 436 451 468 FH protein interacting protein FIP2 (AHRD V3.3 *** A0A1U8EL11_CAPAN) AT5G55000 Solyc10g076870.2 3040 2311 1941 1867 2049 2038 1998 2119 2179 2508 2068 2163 1710 1948 1967 RNA binding protein (AHRD V3.3 *-* A0A2K3MUE2_TRIPR) Solyc10g076880.2 13 20 110 32 32 18 38 9 22 28 116 29 2 35 70 HSP20-like chaperone (AHRD V3.3 *-* A0A2U1PLJ7_ARTAN) Solyc10g076890.3 329 791 821 661 947 931 991 830 811 564 874 695 701 708 860 Binding partner of acd11 1 (AHRD V3.3 *** A0A314KM74_NICAT) AT5G32450 Solyc10g076900.3 2 137 72 90 291 291 325 319 167 57 111 119 43 54 41 Calcium-dependent protein kinase (AHRD V3.3 *** B8QUH1_GOSHI) Solyc10g076910.2 1350 1327 1080 1059 1136 1254 1169 1315 1370 1071 1078 1094 1210 1530 1274 ATP-dependent RNA helicase (AHRD V3.3 *** A0A1Y1IA80_KLENI) AT5G13010 Solyc10g076915.1 4 1 1 5 4 1 4 3 2 3 0 8 1 4 0 Unknown protein Solyc10g076920.3 77 198 142 156 223 204 203 203 201 114 179 169 240 209 255 ABSCISIC ACID-INSENSITIVE 5-like protein 2 (AHRD V3.3 *** A0A2G3BI85_CAPCH) AT3G56850 Solyc10g076930.2 268 313 359 527 404 445 409 346 282 368 270 404 332 464 334 RmlC-type cupin (AHRD V3.3 *** AT3G56820.1) AT3G56820 Solyc10g076940.3 2 2 0 3 4 3 6 2 5 1 14 1 0 0 0 Protein ZINC INDUCED FACILITATOR 1 (AHRD V3.3 *** A0A2G2VW12_CAPBA) Solyc10g076945.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g076970.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** XP_021808599.1) Solyc10g076990.3 7243 5177 4061 4772 4797 4139 4650 4965 3841 5636 3805 5417 3387 4649 4633 ARF GAP-like zinc finger-containing protein ZIGA4 (AHRD V3.3 *** F4HXP0_ARATH) AT1G08680 Solyc10g076995.1 62 41 58 25 63 35 62 66 49 58 17 53 26 60 64 cardiomyopathy-associated protein (AHRD V3.3 *-* AT5G17910.3) Solyc10g077000.3 502 438 392 331 412 465 381 399 540 449 468 322 342 413 637 Dentin sialophosphoprotein (AHRD V3.3 *-* A0A1P8AZC3_ARATH) Solyc10g077010.2 822 1969 1529 1452 1984 3027 1956 2091 1776 1219 1308 1498 2529 2121 1574 Calmodulin 3 Solyc10g077020.2 798 835 880 766 750 857 733 765 785 821 744 599 775 946 696 Kinase family protein (AHRD V3.3 *** A0A2K3P253_TRIPR) AT2G40980 Solyc10g077030.2 396 569 669 563 663 639 618 664 648 593 365 607 819 712 556 Proteasome subunit alpha type (AHRD V3.3 *** A0A0V0HS34_SOLCH) AT2G27020 Solyc10g077040.2 3067 7280 1850 4120 12175 8627 9159 12065 5967 7052 1724 5256 4418 2317 1999 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic (AHRD V3.3 *** A0A1U8EC90_CAPAN) AT3G56940 Solyc10g077050.2 381 256 261 284 286 254 313 286 292 350 282 256 228 299 287 S-acyltransferase (AHRD V3.3 *** A0A2G2VW55_CAPBA) AT3G56930 Solyc10g077060.3 7 7 24 16 34 33 28 33 11 26 31 34 2 5 1 S-acyltransferase (AHRD V3.3 *** A0A2G2VW27_CAPBA) Solyc10g077065.1 738 609 1080 967 807 986 1007 535 497 508 1069 578 740 816 986 Unknown protein Solyc10g077070.2 5437 4219 2836 2899 3130 3394 3025 4090 3638 3780 2306 3909 3378 3855 2603 Histone-lysine n-methyltransferase, h3 lysine-9 specific suvh1 (AHRD V3.3 *** A0A314L467_NICAT) AT5G04940 Solyc10g077080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha-L-arabinofuranosidase 1 (AHRD V3.3 *** A0A2G3BI70_CAPCH) AT3G10740 Solyc10g077090.2 45 76 39 41 26 48 48 34 23 35 61 33 30 44 10 50S ribosomal protein 5 alpha, chloroplastic (AHRD V3.3 *** XP_004249105.1) AT3G56910 Solyc10g077100.1 200 149 112 146 167 122 139 150 96 130 177 113 168 117 73 Plant organelle RNA recognition domain containing protein (AHRD V3.3 *** A0A2P5FBL3_TREOI) AT5G45790 Solyc10g077105.1 13 6 16 5 9 9 12 4 6 6 10 11 6 6 7 Unknown protein Solyc10g077110.1 1877 1520 1581 1611 1358 1740 1779 1127 1259 968 1928 1195 1597 1726 1956 transcription factor IIIA AT1G72050 Solyc10g077120.3 7116 8220 7686 10899 15274 14803 12627 12843 8363 11069 11968 8257 6480 5525 9501 Photosystem II core complex proteins psbY, chloroplastic (AHRD V3.3 *-* A0A1U8E9S9_CAPAN) Solyc10g077130.1 1120 626 1600 516 326 360 343 391 436 607 958 783 526 421 805 calmodulin-binding protein 25-like (AHRD V3.3 *** A0A2I4GIE5_9ROSI) AT3G56880 Solyc10g077135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G2XAX2_CAPBA) Solyc10g078150.3 1855 2266 2271 1763 1813 1687 1839 1844 1803 1431 1645 1553 2891 2429 2371 Nascent polypeptide-associated complex subunit alpha-like protein (AHRD V3.3 *** A0A2I0WF00_9ASPA) AT3G12390 Solyc10g078160.2 2016 1915 2348 3293 2868 2837 3188 2774 1669 2279 3024 2245 1749 1786 2152 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** B3H693_ARATH) AT3G56590 Solyc10g078170.3 5 11 3 14 6 8 14 13 13 23 15 18 2 7 1 Phosphatidylinositol 4-kinase gamma 5 (AHRD V3.3 *** A0A2G2Y136_CAPAN) AT2G40850 Solyc10g078175.1 0 0 0 0 14 1 0 1 1 2 1 1 3 0 0 Unknown protein Solyc10g078180.3 2156 2200 2133 1800 2387 2392 2179 2375 2361 1579 2245 1951 2119 2467 2127 cyclinT1_1 AT5G45190 Solyc10g078190.2 196 205 324 376 315 329 434 292 275 257 208 319 355 323 226 cytosine-5 DNA methyltransferaseL1 AT5G15380 Solyc10g078200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I4H4A1_9ROSI) AT3G12460 Solyc10g078220.2 7 2 0 2 0 0 0 0 1 1 0 0 3 6 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1MC34_ARTAN) Solyc10g078230.3 52 22 93 36 19 9 6 9 25 12 42 22 6 10 2 Cytochrome P450 (AHRD V3.3 *** A0A2U1MC34_ARTAN) Solyc10g078240.2 576 3075 1547 2025 3777 4189 3502 3951 2837 1936 1420 3106 2176 2528 795 Cytochrome P450 (AHRD V3.3 *** A0A2U1MC34_ARTAN) Solyc10g078250.1 19 19 20 23 5 3 7 4 23 7 41 6 29 24 79 Peptidylprolyl isomerase (AHRD V3.3 *-* A0A2G2VW61_CAPBA) AT1G58450 Solyc10g078270.2 5 0 5 2 8 21 13 7 5 1 0 5 1 0 0 WAT1-related protein (AHRD V3.3 *** K4D269_SOLLC) AT5G07050 Solyc10g078275.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc10g078280.3 149 251 226 223 415 355 349 425 367 220 295 296 221 258 251 Cytochrome P450 (AHRD V3.3 *** A0A2U1NMT2_ARTAN) AT3G56630 Solyc10g078300.2 19674 12171 14265 12749 11198 12051 11004 9170 10040 11221 13045 11468 10444 10817 14545 Single-stranded nucleic acid binding R3H protein (AHRD V3.3 *** A0A2U1P9X7_ARTAN) AT3G56680 Solyc10g078310.2 610 556 545 713 845 925 955 790 637 648 745 686 537 541 856 Two-component response regulator ARR1 (AHRD V3.3 *** A0A2G3BIG6_CAPCH) AT3G10760 Solyc10g078320.2 299 298 307 184 181 148 167 182 197 111 202 219 394 342 350 Calmodulin-interacting protein (AHRD V3.3 *** A0A2G3BIC3_CAPCH) AT3G56690 Solyc10g078325.1 2 13 21 35 37 60 59 36 7 2 43 24 2 5 19 Unknown protein Solyc10g078330.2 120 1096 1093 1766 2900 3034 2847 3287 1245 701 1139 1825 159 768 541 B-type cyclin AT4G37490 Solyc10g078340.2 859 1492 1370 1137 1510 1308 1430 1741 1603 1313 1060 1262 1410 1487 1174 Stomatal closure-related actin-binding protein 2 (AHRD V3.3 *** A0A1U8EKT6_CAPAN) AT3G56480 Solyc10g078350.2 73 34 33 53 73 73 53 75 53 38 18 72 43 43 20 Transcription elongation factor (AHRD V3.3 *** A0A200Q6X7_9MAGN) Solyc10g078360.3 0 7 0 4 3 14 17 20 2 5 10 8 0 0 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q94AL3_ARATH) Solyc10g078370.2 1113 1604 2204 1431 2084 2178 1601 2368 1997 1571 1111 2423 783 1772 918 Auxin Efflux Facilitator 9 Solyc10g078380.2 59 81 124 87 68 53 47 59 114 79 41 117 71 84 54 bHLH transcription factor 064 AT2G41130 Solyc10g078390.3 1392 1211 1543 1493 1407 1241 1132 1158 1355 1400 1143 1053 1234 1255 1398 CDPK-related protein kinase (AHRD V3.3 *** A0A1U8EC13_CAPAN) AT2G41140 Solyc10g078400.2 173 317 331 376 357 418 402 369 290 302 251 400 252 278 340 Plant/protein (AHRD V3.3 *** F4IJX5_ARATH) AT2G41150 Solyc10g078410.2 180 235 229 282 297 241 200 261 276 273 220 189 385 200 157 F-box protein (AHRD V3.3 *** A0A1U8E9P8_CAPAN) Solyc10g078420.2 515 350 261 355 324 303 372 320 295 350 398 336 394 365 379 transmembrane protein (AHRD V3.3 *** AT5G09225.1) AT5G09225 Solyc10g078430.2 509 464 419 422 324 418 435 354 314 400 491 377 529 462 423 Transcription factor-like protein DPB (AHRD V3.3 *** A0A1U8EC19_CAPAN) AT5G03415 Solyc10g078440.2 4354 1589 811 995 257 329 328 165 814 1558 1317 568 1986 935 913 Sigma factor binding protein 1, chloroplastic (AHRD V3.3 *** A0A2G3BI49_CAPCH) Solyc10g078450.2 935 1177 1067 829 1119 1039 841 1015 915 802 829 853 1488 1219 1067 Small nuclear ribonucleoprotein family protein (AHRD V3.3 *** A0A2U1N6A1_ARTAN) AT2G43810 Solyc10g078460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *** K4D288_SOLLC) AT3G56960 Solyc10g078470.2 14 90 68 79 84 102 85 90 67 52 64 83 42 90 9 Tryptophan/tyrosine permease (AHRD V3.3 *** A0A1P8B1H3_ARATH) AT2G33260 Solyc10g078480.2 762 610 532 703 481 611 578 441 515 569 605 448 685 638 653 Chitobiosyldiphosphodolichol beta-mannosyltransferase-like protein (AHRD V3.3 *** A0A2K3NQ36_TRIPR) AT1G16570 Solyc10g078490.2 420 686 996 1042 1189 1180 1246 825 851 888 1146 810 822 963 923 ripening-related mRNA AT3G04090 Solyc10g078500.1 0 18 46 45 52 44 46 53 35 59 14 78 22 26 4 small basic intrinsic protein 1.3 Solyc10g078510.3 18 3 7 16 1 7 1 3 23 104 66 1 1 11 11 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A1U8E9Q3_CAPAN) AT2G19440 Solyc10g078520.2 1412 1234 1301 1214 1342 1400 1401 1259 1070 1217 1249 1155 1372 1346 1070 PHD finger protein ING (AHRD V3.3 *** K4D294_SOLLC) AT1G54390 Solyc10g078530.2 634 1192 1403 1214 372 386 350 271 2062 2151 1756 827 2503 947 1403 Patatin (AHRD V3.3 *** A0A2G3BI67_CAPCH) Solyc10g078540.3 229 768 625 388 471 466 420 496 418 233 345 446 1353 815 553 H/ACA ribonucleoprotein complex subunit (AHRD V3.3 *-* A0A2G3BI53_CAPCH) AT3G03920 Solyc10g078550.4 465 764 990 1019 690 696 635 657 940 831 681 651 821 712 534 glutamate dehydrogenase AT5G18170 Solyc10g078560.3 285 132 228 207 132 201 162 127 183 190 167 183 173 178 173 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G2WDY8_CAPBA) AT5G18140 Solyc10g078570.1 125 107 164 127 158 130 132 110 95 119 102 118 93 94 74 hypothetical protein (AHRD V3.3 *-* AT1G55365.1) Solyc10g078580.1 23 709 491 330 713 757 1139 640 243 176 338 156 75 64 50 arabinogalactan protein 14 (AHRD V3.3 *** XP_004249150.1) Solyc10g078590.2 2671 1051 1341 1517 425 436 442 247 1195 1515 1391 1116 1604 1839 2557 Jacalin-related lectin 3 (AHRD V3.3 *-* A0A2G3BI13_CAPCH) AT5G18130 Solyc10g078600.3 781 546 1061 1593 173 160 124 116 474 1025 906 244 387 762 1535 Jacalin-related lectin 3 (AHRD V3.3 *** A0A2G2Y0W6_CAPAN) AT1G19715 Solyc10g078610.1 28 2 0 4 3 5 7 8 6 4 6 5 1 3 7 Ethylene-responsive transcription factor CRF3 (AHRD V3.3 *** A0A2G3BI20_CAPCH) Solyc10g078620.1 8086 15195 12198 8594 14314 14025 13134 14644 9760 8369 9126 10626 15782 11882 9668 40S ribosomal protein S5 (AHRD V3.3 *** A0A1U8EKR1_CAPAN) AT2G37270 Solyc10g078630.2 3066 5012 6812 4778 6320 7621 7477 5140 3767 2669 5039 4140 6046 5813 6383 40S ribosomal protein S28 (AHRD V3.3 *** A0A2G3BI08_CAPCH) AT5G03850 Solyc10g078650.3 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 Calmodulin binding protein (AHRD V3.3 *** A0A2K3N563_TRIPR) Solyc10g078660.2 1748 2277 2462 1562 1675 1813 1781 1472 1454 1191 2172 1297 3599 2689 2756 60S ribosomal protein L24 homolog (AHRD V3.3 *** A0A1Y1I5Y5_KLENI) AT2G44860 Solyc10g078670.3 0 1 0 0 0 0 1 1 5 0 0 1 0 0 0 Transcription factor (AHRD V3.3 *** A0A2R4QNU7_9POAL) AT5G06839 Solyc10g078680.3 175 1027 1041 1065 1859 2035 1863 2087 1093 737 870 1497 894 1205 690 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061DXG0_THECC) Solyc10g078690.3 1107 1589 2246 1887 2209 2356 2302 2040 1799 1388 2035 1854 1775 1732 1963 Outer envelope pore protein 16-3, chloroplastic/mitochondrial (AHRD V3.3 *** A0A1U8E9I6_CAPAN),Pfam:PF02466 AT2G42210 Solyc10g078700.3 229 731 680 628 1532 1761 2264 1306 1207 392 1166 908 475 686 655 Squamosa promoter binding protein 15 AT2G42200 Solyc10g078710.1 98 84 146 93 145 164 172 129 92 49 123 60 166 131 155 rho GTPase-activating gacO-like protein (AHRD V3.3 *** AT2G42190.3) AT3G57930 Solyc10g078715.1 17 13 13 11 41 24 21 36 20 13 16 28 15 22 10 Unknown protein Solyc10g078720.2 6 0 0 23 0 0 1 0 9 2 6 1 6 7 29 Myb family transcription factor APL (AHRD V3.3 *** A0A2G2VWG6_CAPBA) AT5G06800 Solyc10g078730.2 585 626 517 508 466 622 610 502 418 373 420 442 583 733 491 Non-structural maintenance of chromosomes element 4-like protein A (AHRD V3.3 *** A0A2G2VWE3_CAPBA) AT1G51130 Solyc10g078740.2 227 1145 880 870 1417 1274 1421 1492 989 569 807 1039 1049 1051 629 Enoyl-[acyl-carrier-protein] reductase [NADH] (AHRD V3.3 *** B6TFF6_MAIZE) AT2G05990 Solyc10g078750.2 1010 823 780 833 566 670 649 541 542 613 666 634 735 827 863 Zinc finger transcription factor 59 AT5G06770 Solyc10g078760.2 0 3 1 0 0 2 2 0 0 0 0 4 1 5 0 Late embryogenesis abundant protein (AHRD V3.3 *** A0A2G2VWE8_CAPBA) Solyc10g078770.2 575 40 46 8 0 0 1 0 33 66 14 10 27 162 226 11 kDa late embryogenesis abundant protein (AHRD V3.3 *-* A0A2G3BHR7_CAPCH) Solyc10g078775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g078780.2 15 5 0 0 0 0 0 0 0 1 0 0 0 1 5 11 kDa late embryogenesis abundant protein (AHRD V3.3 *-* A0A2G2YPD1_CAPAN) AT5G06760 Solyc10g078790.1 1464 1479 939 1029 1191 987 1042 1427 1163 1057 822 1022 1226 1296 846 Muniscin C-terminal mu homology domain (AHRD V3.3 *** A0A200Q163_9MAGN) AT5G57460 Solyc10g078800.3 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 Protein phosphatase 2C (AHRD V3.3 *-* A0A2U1PJM7_ARTAN) Solyc10g078810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C (AHRD V3.3 *** B6T5D8_MAIZE) Solyc10g078820.2 0 2 18 11 46 58 47 36 3 5 17 8 14 13 3 Protein phosphatase 2c-like protein (AHRD V3.3 *** Q8S2S5_EUTHA) Solyc10g078830.2 668 777 689 645 797 706 711 887 858 671 562 749 1020 885 516 Phosducin (AHRD V3.3 *** A0A200RD62_9MAGN) AT5G14240 Solyc10g078840.1 0 0 0 0 5 0 0 3 0 0 0 1 1 0 0 Germin-like protein 1 (AHRD V3.3 *** A0A2U1LX74_ARTAN) Solyc10g078850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Germin-like protein subfamily 1 member 7 (AHRD V3.3 *** A0A2G2YP64_CAPAN) Solyc10g078860.2 1201 1279 921 746 782 845 758 848 963 790 762 1015 1241 1155 869 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** A0A2G3BHQ3_CAPCH) AT5G45140 Solyc10g078880.2 1 0 0 3 0 0 1 0 2 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** A0A2G3BHQ3_CAPCH) AT5G45140 Solyc10g078890.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4D2D0_SOLLC) AT5G06720 Solyc10g078900.3 764 783 767 796 526 725 693 566 649 661 887 606 702 705 869 RING/U-box superfamily protein (AHRD V3.3 *** AT3G58030.4) AT3G58030 Solyc10g078910.3 1144 1210 1261 1061 1123 1041 1009 1178 1323 1684 1349 1214 1207 1070 1094 Protein trichome birefringence (AHRD V3.3 *** A0A1U8EJ41_CAPAN) AT5G06700 Solyc10g078920.3 190 63 249 123 49 37 36 21 154 202 273 194 88 178 223 Thioredoxin-like 3-1, chloroplastic (AHRD V3.3 *** A0A2G3BHN6_CAPCH) AT5G06690 Solyc10g078930.2 2155 2444 2204 1465 2272 2458 2210 2524 1988 1493 1643 2004 2248 1832 1545 Activator of 90 kDa heat shock protein ATPase-like protein 1 (AHRD V3.3 *** A0A1J3GDI7_NOCCA) AT3G12050 Solyc10g078940.2 0 1 5 0 0 0 0 2 2 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A1I9LM53_ARATH) AT2G41970 Solyc10g078950.2 3047 2809 2504 2611 2114 2145 2331 2499 2302 2314 1766 2220 3062 2866 2236 carbon catabolite repressor protein 4 homolog 1-like (AHRD V3.3 *** A0A2I4GY99_9ROSI) AT3G58560 Solyc10g078960.2 8246 12073 13857 9717 13034 15642 13721 12257 8816 6707 10723 8744 14502 12075 11905 60S ribosomal protein L21 (AHRD V3.3 *** B6SYW9_MAIZE) AT1G57660 Solyc10g078970.1 3 5 1 10 28 19 8 13 8 4 9 1 2 2 0 Zinc finger protein 6 (AHRD V3.3 *** A0A2G2VVT3_CAPBA) Solyc10g078990.1 15 26 92 79 26 81 35 49 17 30 35 53 19 63 18 Zinc finger protein 6 (AHRD V3.3 *** A0A2G2VVT3_CAPBA) Solyc10g079000.1 200 448 379 334 368 298 309 329 347 207 273 282 564 275 253 Calcium load-activated calcium channel (AHRD V3.3 *** A0A1U8FBW8_CAPAN) AT5G06660 Solyc10g079010.3 1517 1638 1395 1642 1322 1322 1340 1382 1458 1353 1397 1196 1601 1734 1808 hypothetical protein (AHRD V3.3 *** AT3G58050.1) AT3G58050 Solyc10g079020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tsw (AHRD V3.3 *-* A0A1C9TCM9_CAPCH) Solyc10g079030.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ras gtpase (AHRD V3.3 *** A0A1J9QT15_9PEZI) AT3G12160 Solyc10g079040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Squalene synthase (AHRD V3.3 *** A0A2G3BHX4_CAPCH),Pfam:PF00494 Solyc10g079050.2 46 41 25 23 23 16 27 32 39 20 33 15 19 39 10 BHLH transcription factor o95 AT2G42280 Solyc10g079060.2 0 3 0 5 2 1 0 2 1 0 0 0 0 2 0 Squalene synthase (AHRD V3.3 *** A0A2G3BHX4_CAPCH),Pfam:PF00494 Solyc10g079070.2 1451 1960 1931 2270 1800 1761 1928 1588 2076 1166 1571 1946 1652 2242 2236 bHLH transcription factor 065 AT2G42300 Solyc10g079080.2 526 694 702 674 618 751 706 763 820 687 693 659 805 644 639 Zinc finger A20 and AN1 domain-containing stress-associated protein 8 (AHRD V3.3 *** A0A1U8EKJ0_CAPAN) AT1G51200 Solyc10g079090.3 113 960 874 632 1117 1070 1130 1100 940 324 570 797 507 931 307 Chaperone protein dnaJ 6 (AHRD V3.3 *** A0A1U8EIY5_CAPAN) AT3G12170 Solyc10g079100.1 0 3 7 1 6 12 3 2 3 3 0 0 4 1 1 Unknown protein Solyc10g079110.2 83 197 170 167 292 275 263 236 196 185 189 207 173 111 85 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (AHRD V3.3 *** A0A2G2YP29_CAPAN) AT3G57650 Solyc10g079120.3 1790 1851 1418 1962 1879 1927 2037 2116 1693 2130 1325 1907 1521 1743 1580 Zinc finger transcription factor 60 AT2G41900 Solyc10g079125.1 6 7 23 6 0 13 3 2 2 4 5 1 3 8 9 Unknown protein Solyc10g079130.2 849 1159 1438 1082 1306 1266 1329 1156 1284 972 1262 965 1035 1172 1006 MAP kinase kinase kinase 76 AT3G57530 Solyc10g079140.2 200 224 251 231 221 279 204 210 183 117 111 175 298 330 284 Guanylate kinase-like (AHRD V3.3 *** A0A200QIC6_9MAGN) AT3G57550 Solyc10g079150.3 585 175 102 100 35 26 21 12 25 214 57 59 176 244 727 Nuclear transcription factor Y subunit A-7 (AHRD V3.3 *** A0A2G3BHM5_CAPCH) Solyc10g079155.1 15 7 6 15 21 10 11 25 12 12 17 8 11 15 0 Unknown protein Solyc10g079160.1 300 280 256 216 245 227 279 228 237 244 146 261 202 261 243 Plant organelle RNA recognition domain-containing protein (AHRD V3.3 *** A0A103XXV7_CYNCS) AT2G39120 Solyc10g079170.2 369 958 779 819 1172 1151 1249 1327 907 529 799 1043 616 915 710 Leucine-rich repeat receptor-like tyrosine-protein kinase (AHRD V3.3 *** A0A2R6R578_ACTCH) AT2G41820 Solyc10g079180.2 5 0 0 2 0 1 0 0 0 0 2 0 0 1 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1NN53_ARTAN) Solyc10g079190.3 9082 4760 4824 6111 3722 3772 3815 3741 3134 5520 4960 4621 3774 4355 5408 Zinc finger transcription factor 61 AT1G07360 Solyc10g079200.2 179 878 521 584 810 796 785 736 769 413 514 481 731 480 317 Mitochondrial carnitine/acylcarnitine carrier-like protein (AHRD V3.3 *** A0A2G2VW73_CAPBA) AT5G46800 Solyc10g079210.2 17 15 37 41 26 21 19 14 14 13 13 14 12 16 22 Glycosyltransferase-like KOBITO 1 (AHRD V3.3 *** A0A2G2VW71_CAPBA) Solyc10g079220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Senescence-specific cysteine protease SAG39 (AHRD V3.3 *-* A0A2G3CBW6_CAPCH) Solyc10g079230.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UPF0481 protein At3g47200-like (AHRD V3.3 *** A0A2I4GJF8_9ROSI) Solyc10g079240.2 6 18 10 12 1 9 8 4 2 2 0 3 15 9 7 SUN-like protein 1 AT5G03960 Solyc10g079250.2 554 495 466 520 488 728 615 413 394 363 514 437 438 516 595 DNA repair protein recA-like protein 2, mitochondrial (AHRD V3.3 *** A0A2G3BHD2_CAPCH) AT3G10140 Solyc10g079260.2 775 781 557 627 645 610 566 640 733 728 596 687 996 869 503 Protein FATTY ACID EXPORT 1, chloroplastic (AHRD V3.3 *** A0A1U8E9B3_CAPAN) AT3G57280 Solyc10g079270.3 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 Alpha carbonic anhydrase (AHRD V3.3 *** A0A200R5P3_9MAGN) Solyc10g079280.2 300 389 350 379 380 323 417 350 316 311 284 400 289 277 380 Nucleotide-sugar transporter family protein (AHRD V3.3 *** A0A2U1PWK4_ARTAN) AT5G04160 Solyc10g079290.2 515 788 642 708 802 685 806 920 570 699 399 797 528 617 432 Outer envelope protein 80, chloroplastic (AHRD V3.3 *** A0A2G2V0H4_CAPBA) AT5G19620 Solyc10g079300.2 48 50 58 65 94 110 96 51 67 34 83 50 61 66 54 Calcium-transporting ATPase (AHRD V3.3 *** A0A2G3BHE9_CAPCH) AT3G57330 Solyc10g079310.2 208 134 212 208 268 246 238 227 180 157 256 193 146 165 216 tRNA-splicing endonuclease subunit (AHRD V3.3 *** F4J8D6_ARATH) AT3G57360 Solyc10g079320.3 0 20 88 11 0 9 6 2 20 68 12 9 9 2 8 Glycosyltransferase (AHRD V3.3 *** A0A0A1WDL3_NICAT) Solyc10g079330.2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A0A1WDL3_NICAT) Solyc10g079340.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A0A1WCT7_NICAT) Solyc10g079350.3 98 139 125 195 160 106 67 51 214 149 186 348 66 104 7 Glycosyltransferase (AHRD V3.3 *** A0A0A1WCT7_NICAT) Solyc10g079360.3 36 85 59 67 173 116 145 106 88 58 76 89 45 83 78 Transcription initiation factor IIB (AHRD V3.3 *** A0A2G2YP06_CAPAN) AT3G10330 Solyc10g079370.3 969 832 1104 1081 962 982 1102 888 913 848 1174 772 770 972 1268 Transcription initiation factor IIB (AHRD V3.3 *** A0A1U8EBN6_CAPAN) Solyc10g079380.2 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 Heat stress transcription factor B-3 (AHRD V3.3 *-* A0A2G2VW77_CAPBA) AT2G41690 Solyc10g079390.1 8 65 122 99 142 88 79 112 35 28 49 50 49 46 57 Transmembrane protein (AHRD V3.3 *** Q9M2K7_ARATH) AT3G57400 Solyc10g079400.3 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Villin (AHRD V3.3 *** A0A2P5EN25_TREOI) Solyc10g079410.2 12 11 15 0 0 0 0 0 5 7 10 6 1 4 14 triacylglycerol lipase SDP1-like (AHRD V3.3 *** A0A2I4ECT5_9ROSI) AT5G04040 Solyc10g079420.1 1942 1136 2326 1467 561 636 777 557 1336 1356 3107 816 2381 1502 1223 Calcium-dependent protein kinase (AHRD V3.3 *-* CDPK_DAUCA) AT3G10190 Solyc10g079430.2 578 604 597 510 416 426 441 394 474 358 542 466 810 720 728 U3 small nucleolar RNA-associated protein 11 (AHRD V3.3 *** A0A1U8E9A3_CAPAN) AT3G60360 Solyc10g079440.2 328 195 342 286 273 326 296 227 232 181 241 235 197 225 326 FAD dependent oxidoreductase (AHRD V3.3 *** A0A200QTI7_9MAGN) AT3G56840 Solyc10g079450.2 518 788 832 773 969 1082 1005 968 824 616 704 737 787 778 679 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A1I9LQ25_ARATH) AT5G04060 Solyc10g079460.1 243 287 330 389 308 377 359 279 232 268 238 364 263 297 251 BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G3LSH3_LOTJA) AT2G41370 Solyc10g079470.3 1107 1260 960 1066 815 819 1030 1025 989 995 872 973 1300 1316 999 gldhL-galactono-1,4-lactone dehydrogenase AT3G47930 Solyc10g079480.1 173 125 149 111 103 159 110 136 142 102 109 157 102 126 157 Lycopene beta-cyclase (AHRD V3.3 *** A0A0A7DVP8_LYCBA),Pfam:PF05834 AT3G10230 Solyc10g079490.2 535 676 522 815 1259 1164 1091 1071 663 642 610 806 612 669 537 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) AT3G03690 Solyc10g079500.2 6969 4114 2178 2612 2520 1958 1658 2846 2652 4007 2228 3614 3105 2538 2048 Inosine-5'-monophosphate dehydrogenase (AHRD V3.3 *** A0A2G2VW93_CAPBA) AT1G16350 Solyc10g079510.3 20 405 425 396 798 725 802 715 375 251 317 485 216 508 65 RAD3-like DNA-binding helicase protein (AHRD V3.3 *** A0A1P8AV25_ARATH) AT1G20720 Solyc10g079520.1 54 56 77 66 46 47 47 35 45 36 42 17 53 57 69 UPF0481 protein At3g47200-like (AHRD V3.3 *** A0A2I4ECQ1_9ROSI) Solyc10g079530.2 36 45 21 40 33 26 39 12 23 41 26 24 50 33 33 UPF0481 protein At3g47200-like (AHRD V3.3 *** A0A2I4ECQ1_9ROSI) Solyc10g079540.1 1 1 0 1 0 2 1 0 2 0 0 0 0 0 0 myricetin O-methyltransferase-like (AHRD V3.3 *** A0A1U8ECF5_CAPAN) Solyc10g079550.3 99 77 114 105 82 86 88 101 99 115 75 142 46 73 47 Mitochondrial fission 1 protein (AHRD V3.3 *** A0A2G2YNY3_CAPAN) Solyc10g079560.1 708 875 478 848 965 938 880 1003 608 829 585 750 507 727 401 Glutaredoxin (AHRD V3.3 *** A0A200PSH1_9MAGN) AT3G57070 Solyc10g079570.3 0 0 6 1 1 0 1 1 2 5 0 6 0 0 5 Acyltransferase (AHRD V3.3 *-* Q58VT1_CAPFR) Solyc10g079580.2 665 442 465 371 472 433 429 399 351 405 409 344 444 481 356 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** Q9LNE8_ARATH) AT1G05970 Solyc10g079590.1 74 70 87 77 340 299 240 336 122 192 77 231 119 99 18 Histidine-tRNA ligase (AHRD V3.3 *** A0A1I9LTH3_ARATH) AT3G10250 Solyc10g079600.2 657 1997 669 1146 2564 2092 2075 1424 2756 984 1065 500 1976 2173 1786 Two-component response regulator ARR9 (AHRD V3.3 *** A0A2G2VW67_CAPBA) AT3G57040 Solyc10g079610.2 679 1099 575 523 909 810 711 760 642 701 343 652 937 638 486 Strictosidine synthase family protein (AHRD V3.3 *** D7LVM7_ARALL) AT3G57030 Solyc10g079620.2 2369 1399 223 1115 1341 1169 985 1466 972 1295 181 497 827 230 144 haloacid dehalogenase-like hydrolase domain-containing protein 3 (AHRD V3.3 *** A0A2I4DP12_9ROSI),Pfam:PF13419 AT2G41250 Solyc10g079630.1 0 0 0 0 0 0 0 0 4 1 0 1 0 1 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KTF4_ARTAN) AT3G50930 Solyc10g079640.2 148 217 119 100 71 101 51 88 661 1437 936 851 396 334 199 IAA-amino acid hydrolase ILR1-like 6 (AHRD V3.3 *** A0A2G2YNX9_CAPAN) AT1G44350 Solyc10g079650.2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 066 AT3G56970 Solyc10g079660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 067 Solyc10g079670.2 48 53 28 67 28 23 43 45 31 68 51 31 26 21 22 zinc phosphodiesterase ELAC protein 2-like (AHRD V3.3 *** A0A1S3ZRM6_TOBAC) Solyc10g079680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor 068 Solyc10g079690.2 11 27 36 41 12 14 25 13 42 30 25 61 26 40 26 Unknown protein Solyc10g079700.2 13 76 30 109 35 98 76 55 214 33 61 26 76 100 60 Two-component response regulator arr9 (AHRD V3.3 *** A0A0A1WCS3_NICAT) AT3G57040 Solyc10g079710.3 271 150 98 102 100 82 73 71 115 144 73 80 142 135 89 Histidine-tRNA ligase (AHRD V3.3 *** A0A1I9LTH3_ARATH) AT3G10250 Solyc10g079720.2 360 521 360 494 412 479 518 530 497 357 274 442 453 497 416 Cystathionine beta-lyase (AHRD V3.3 *** A0A1U8EBG6_CAPAN) AT3G57050 Solyc10g079730.3 115 692 498 681 1085 976 982 1278 685 417 451 862 135 501 245 Condensin complex subunit 1 (AHRD V3.3 *** A0A2G2YP95_CAPAN) AT3G57060 Solyc10g079740.2 589 593 622 591 714 723 708 780 648 509 665 611 476 582 572 HAUS augmin-like complex subunit 1 (AHRD V3.3 *** A0A200RDZ2_9MAGN) AT2G41350 Solyc10g079750.2 346 871 915 1094 456 655 453 385 376 511 452 910 639 899 1077 BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G3LSH3_LOTJA) Solyc10g079755.1 3279 1728 2026 2313 1180 1493 1413 1254 1946 2150 2533 1496 2527 1870 1957 Calcium-dependent protein kinase (AHRD V3.3 *-* CDPK_DAUCA) AT3G10190 Solyc10g079760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g079770.3 1323 426 329 366 253 337 334 264 374 515 448 282 242 321 572 triacylglycerol lipase SDP1-like (AHRD V3.3 *** A0A2I4ECT5_9ROSI) AT5G04040 Solyc10g079780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g079790.1 6 11 19 13 8 8 1 10 5 7 4 1 4 8 27 Plant calmodulin-binding-like protein (AHRD V3.3 *-* G7KRQ7_MEDTR) AT5G04020 Solyc10g079795.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g079810.1 47 13 1 9 0 0 0 0 0 15 0 1 9 18 17 Unknown protein Solyc10g079820.2 9573 4791 6119 5777 3196 3118 3764 2973 3665 7126 6053 4501 4421 5240 9343 Protein EARLY RESPONSIVE TO DEHYDRATION 15 (AHRD V3.3 *** A0A1U8FFS2_CAPAN) AT2G41430 Solyc10g079830.3 398 377 512 398 380 345 335 321 406 389 535 420 383 409 502 7,8-dihydroneopterin aldolase (AHRD V3.3 *** Q6TFM2_SOLLC) AT3G11750 Solyc10g079840.2 364 249 373 435 108 120 90 119 361 205 393 475 245 473 351 Peptide chain release factor 2-like protein (AHRD V3.3 *** A0A2K3N7D8_TRIPR) AT3G57190 Solyc10g079850.2 1237 1212 1303 1264 1092 1078 1150 884 1094 961 1124 978 1123 1226 1067 AP-5 complex subunit beta-like protein (AHRD V3.3 *** Q9LT22_ARATH) AT3G19870 Solyc10g079860.2 1179 1868 1198 748 1251 1055 1005 1344 1904 2001 1055 622 4428 1940 915 LEQB L.esculentum TomQ'b beta(1,3)glucanase AT3G57270 Solyc10g079870.3 64 33 24 53 1 6 3 4 22 34 18 2 2 1 0 Cytokinin dehydrogenase 1 (AHRD V3.3 *** A0A2G3BH86_CAPCH) AT2G41510 Solyc10g079880.2 6318 8018 7160 5363 7467 6997 6926 7204 5565 5605 5403 6264 7591 7526 6250 Eukaryotic translation initiation factor 3 subunit E (AHRD V3.3 *** A0A2G3BH80_CAPCH) AT3G57290 Solyc10g079890.2 5731 6681 4143 5281 5902 4503 4813 7964 5177 8049 3761 6927 6186 5142 2841 Calcium-binding EF-hand family protein (AHRD V3.3 *** A0A2U1NS17_ARTAN) AT3G10300 Solyc10g079900.3 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 Unknown protein Solyc10g079910.2 8 27 84 4 85 120 83 84 123 30 36 83 35 27 0 Nucleotide-sugar transporter family protein (AHRD V3.3 *** A0A2U1PWK4_ARTAN) AT5G04160 Solyc10g079920.2 149 170 238 200 139 253 203 163 123 167 221 142 208 223 133 BnaCnng08120D protein (AHRD V3.3 *-* A0A078HK72_BRANA) Solyc10g079930.1 948 798 602 293 106 79 83 101 246 1194 475 119 3247 1071 482 Glycosyltransferase (AHRD V3.3 *** A0A0A1WDH9_NICAT) Solyc10g079940.1 3 1 0 0 0 1 0 0 0 0 0 0 1 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A0A1WDH9_NICAT) Solyc10g079950.2 508 242 347 300 215 324 364 219 254 261 368 236 344 303 444 Glycosyltransferase (AHRD V3.3 *** A0A288W8G2_GARJA) Solyc10g079960.1 65 45 36 65 53 43 47 42 39 47 40 34 31 66 45 Phosphoglycerate mutase-like family protein (AHRD V3.3 --* AT5G15070.4),Pfam:PF18086 Solyc10g079970.2 456 386 467 457 574 568 480 434 486 395 468 464 399 393 536 Transmembrane protein 19 (AHRD V3.3 *** A0A1J3EWI5_NOCCA) AT5G19930 Solyc10g079980.1 0 1 8 14 0 3 0 0 7 1 17 7 5 9 4 Glycosyltransferase (AHRD V3.3 *** A0A0A1WDL3_NICAT) Solyc10g079990.3 1049 631 756 553 517 509 569 422 777 824 927 628 573 741 699 Transcription initiation factor IIB (AHRD V3.3 *** A0A2G3BH71_CAPCH) Solyc10g080010.2 302 132 183 98 31 52 27 45 53 92 191 96 120 172 75 Glycosyltransferase family 61 protein (AHRD V3.3 *** A0A2U1KMB4_ARTAN) AT2G41640 Solyc10g080020.3 424 316 574 552 468 595 641 506 385 510 629 518 427 472 663 F-box/LRR-repeat protein At5g63520-like (AHRD V3.3 *** A0A2I4FAV8_9ROSI) AT5G63520 Solyc10g080030.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* F1T116_9ERIC) Solyc10g080040.3 633 880 705 714 613 570 607 773 689 573 522 784 737 842 606 Ribonuclease III family protein (AHRD V3.3 *** A0A2U1NY53_ARTAN) AT4G37510 Solyc10g080050.3 8 7 5 5 14 6 2 7 5 12 20 9 5 8 25 Protein MIZU-KUSSEI 1 (AHRD V3.3 *** A0A2G2VVW3_CAPBA) AT2G41660 Solyc10g080060.1 0 2 0 3 0 0 0 0 0 1 4 0 0 0 0 Protein MIZU-KUSSEI 1 (AHRD V3.3 *** A0A2G2VVW3_CAPBA) Solyc10g080070.3 451 424 397 259 196 170 250 174 220 137 251 234 573 444 498 Ribosome biogenesis GTPase A (AHRD V3.3 *-* A0A1J3EQ97_NOCCA) AT2G41670 Solyc10g080080.3 819 857 574 625 798 740 813 835 804 840 691 689 642 556 883 Thioredoxin reductase (AHRD V3.3 *** A0A2G3BH62_CAPCH) AT2G41680 Solyc10g080090.3 2106 1788 1179 1126 1340 1515 1303 1474 1327 1388 981 1505 1437 1236 846 zinc finger BED domain-containing protein DAYSLEEPER-like (AHRD V3.3 *** A0A2I4F531_9ROSI) AT3G42170 Solyc10g080100.3 312 447 434 451 467 609 655 640 598 364 504 452 344 463 445 Villin (AHRD V3.3 *** A0A2P5EN25_TREOI) AT2G41740 Solyc10g080110.3 603 617 617 594 640 536 644 604 477 427 599 503 729 711 601 Cytoplasmic tRNA 2-thiolation protein 2 (AHRD V3.3 *** A0A2G2YNS4_CAPAN) AT4G35910 Solyc10g080120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *-* M9MU27_SILVU) Solyc10g080130.3 121 126 141 123 94 197 185 134 46 62 66 83 79 119 105 Exosome complex component RRP43 (AHRD V3.3 *** A0A2U1QHR4_ARTAN) Solyc10g080140.2 0 0 4 0 0 5 2 2 0 3 0 5 1 1 0 pentatricopeptide repeat-containing protein At5g41170, mitochondrial-like (AHRD V3.3 --* XP_026378048.1) AT3G57440 Solyc10g080150.2 160 260 273 368 493 603 475 486 328 493 570 512 279 273 269 Methyltransferase (AHRD V3.3 *** A0A1U8ENF4_CAPAN) AT5G13710 Solyc10g080160.2 1181 1578 1602 1660 1575 1816 1713 1401 993 1255 1250 1350 1460 1736 1382 30S ribosomal protein S9 (AHRD V3.3 *** A0A2G3CAH5_CAPCH) AT3G49080 Solyc10g080170.1 0 0 0 0 0 2 2 1 0 0 0 0 0 0 0 Unknown protein Solyc10g080180.3 741 1167 938 758 947 1099 874 868 903 607 732 884 1315 1094 927 U3 small nucleolar RNA-associated protein 18-like protein (AHRD V3.3 *** A0A2G3BH70_CAPCH) AT5G14050 Solyc10g080190.1 891 790 1625 1406 1784 2042 1901 1597 1295 1086 1883 1377 743 945 1290 DUF1138 domain-containing protein (AHRD V3.3 *** A0A1Q3B532_CEPFO) AT1G01170 Solyc10g080200.2 136 184 292 214 173 209 213 180 208 216 215 190 190 175 184 Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 (AHRD V3.3 *** A0A2G2VVV3_CAPBA) AT2G41835 Solyc10g080210.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 polygalacturonase AT3G07970 Solyc10g080220.2 33 36 57 68 42 55 51 49 36 23 73 33 53 64 21 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q5T3_9MAGN) Solyc10g080230.2 138 81 76 94 32 30 22 25 45 40 62 17 164 91 242 Remorin (AHRD V3.3 *** A0A200Q6K8_9MAGN) Solyc10g080240.1 62 35 44 91 11 13 18 8 17 27 30 14 87 47 110 Remorin (AHRD V3.3 *-* E5GBY5_CUCME) Solyc10g080260.3 743 822 754 932 873 986 941 1014 794 871 734 968 785 819 508 Zinc finger transcription factor 62 Solyc10g080270.1 0 0 0 0 0 0 0 0 2 0 15 0 3 0 1 Unknown protein Solyc10g080300.1 627 455 789 518 392 613 528 364 415 291 574 397 452 505 761 Telomere repeat-binding factor 3 (AHRD V3.3 --* TRB3_ARATH) Solyc10g080310.3 0 0 0 0 0 0 0 0 6 3 2 3 0 0 0 Ethylene-responsive element binding-factor (AHRD V3.3 *-* K9UTK3_JATCU) Solyc10g080320.3 2044 1887 1587 1508 1627 1691 1774 1624 1454 1638 1417 1524 1918 1777 1711 Adenylosuccinate synthetase (AHRD V3.3 *** S8CIB7_9LAMI) AT3G57610 Solyc10g080330.2 260 135 179 218 158 140 151 106 165 151 159 101 92 175 255 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1LJ49_ARTAN) AT5G36300 Solyc10g080340.3 42 40 18 59 31 9 4 8 17 12 47 11 46 26 117 Protein DETOXIFICATION (AHRD V3.3 *** A0A2I4ETK5_9ROSI) AT1G33110 Solyc10g080350.3 1274 1370 1015 843 809 728 788 986 1007 659 743 787 1593 1581 1282 DNA-directed RNA polymerase subunit (AHRD V3.3 *** A0A2G3BH46_CAPCH) AT3G57660 Solyc10g080360.1 36 313 345 471 733 706 789 633 208 160 356 449 92 176 261 Unknown protein Solyc10g080370.1 250 331 888 305 285 447 447 257 209 186 781 382 399 359 578 Unknown protein Solyc10g080380.1 2 1 0 5 0 0 0 0 0 1 2 0 0 0 77 Unknown protein Solyc10g080390.2 1160 2126 2253 2731 3098 3163 3081 2964 2967 2167 2374 2054 2079 1856 2738 serine/threonine-protein kinase Nek6-like isoform X1 (AHRD V3.3 *** A0A2I4G4E6_9ROSI) Solyc10g150141.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate-dependent dioxygenase DAO (AHRD V3.3 *-* A0A1U8FIV0_CAPAN) Solyc10g150142.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *-* A0A2U1P3R8_ARTAN) Solyc10g080400.2 39 431 401 513 650 664 688 687 383 240 419 545 164 336 255 uv-b-insensitive 4 (AHRD V3.3 *** AT2G42260.2) AT2G42260 Solyc10g080410.3 79 60 36 46 5 7 6 3 6 36 4 42 32 30 5 Transcription factor HBP-1b(C1) (AHRD V3.3 *** A0A2G2VVQ6_CAPBA) AT5G06839 Solyc10g080420.3 2153 2828 2459 2570 2853 3575 3215 3134 3054 2167 2421 3011 2359 2657 2273 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *-* A0A061DXG0_THECC) Solyc10g080430.1 26 240 189 198 497 556 499 598 217 100 158 299 153 239 69 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061DXG0_THECC) AT3G57880 Solyc10g080440.2 2611 2847 2113 2454 2567 2529 2766 2848 2494 2422 1839 2259 2704 2651 1984 TBCC domain-containing protein 1-like (AHRD V3.3 *** A0A2I4DN11_9ROSI) AT3G57890 Solyc10g080450.3 202 222 385 300 328 373 341 307 289 122 622 217 318 312 488 rho GTPase-activating gacO-like protein (AHRD V3.3 *** AT2G42190.3) AT3G57930 Solyc10g080460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb family transcription factor APL (AHRD V3.3 *** A0A2G2VWG6_CAPBA) AT5G06800 Solyc10g080470.1 589 1194 865 893 1439 1255 1260 1233 752 565 922 909 806 824 621 hypothetical protein (AHRD V3.3 *** AT3G57990.1) AT3G57990 Solyc10g080480.2 659 1334 724 688 924 1007 946 972 707 553 653 854 1107 1164 553 Zinc finger transcription factor 63 AT5G06770 Solyc10g080490.2 294 241 243 168 255 192 235 204 177 207 147 211 170 190 113 Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** A8MRU9_ARATH) AT2G42130 Solyc10g080500.2 774 3452 1175 1253 2387 1951 1739 2378 2127 1770 981 1680 1692 1149 684 Actin (AHRD V3.3 *** A0A2G2VVS8_CAPBA) AT3G12110 Solyc10g080510.1 4 0 5 1 0 0 0 0 0 0 0 0 0 0 0 Lectin receptor kinase (AHRD V3.3 *** A0A2K3LCW2_TRIPR) AT5G06740 Solyc10g080520.3 2616 2146 1974 1944 1904 1611 1694 1835 2289 2204 1941 2007 2053 2079 2133 E3 ubiquitin-protein ligase CHFR (AHRD V3.3 *** A0A1J3DBT4_NOCCA) AT3G54360 Solyc10g080530.2 222 114 108 133 166 171 122 134 128 104 122 101 89 86 149 WRC protein (AHRD V3.3 *** A0A2K3PR77_TRIPR) AT2G42040 Solyc10g080540.2 19 122 104 79 92 94 89 74 94 56 94 59 74 74 101 Homeobox-leucine zipper protein HOX27 (AHRD V3.3 *** A0A2G3BH29_CAPCH) Solyc10g080550.2 140 197 265 357 364 448 392 380 268 209 214 244 182 285 350 Protein trichome birefringence (AHRD V3.3 *** A0A1U8E8Z1_CAPAN) AT5G06700 Solyc10g080560.2 86 123 79 95 38 75 85 77 53 96 71 83 177 108 65 DNA-3-methyladenine glycosylase (AHRD V3.3 *** A0A2G2YNN2_CAPAN) AT3G12040 Solyc10g080570.2 79 33 43 33 11 23 14 10 26 18 35 19 81 47 20 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A1U8EER1_CAPAN) Solyc10g080580.1 0 0 3 1 1 3 5 4 3 0 0 1 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *** A0A1I9LM53_ARATH) AT2G41970 Solyc10g080590.2 2002 4497 4044 3113 3891 3671 3684 3517 3404 2335 3589 2930 4642 4270 3742 60S ribosomal protein L21 (AHRD V3.3 *** B6SYW9_MAIZE) AT1G57660 Solyc10g080600.3 77 122 97 116 73 98 78 67 156 69 87 93 126 74 70 Zinc finger protein 6 (AHRD V3.3 *** A0A1U8ENE4_CAPAN) AT3G58070 Solyc10g080610.1 3473 1611 879 436 385 281 574 273 488 1963 740 357 669 967 1494 F-box/kelch-repeat protein At1g15670-like (AHRD V3.3 *** A0A2I4E0A4_9ROSI) Solyc10g080620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g080630.2 1502 1243 1188 1094 1115 1133 1099 1195 1245 1224 897 1110 990 1116 945 ripening related X72734 AT3G11960 Solyc10g080640.3 14 15 59 55 69 50 71 53 21 25 62 19 19 12 35 Calmodulin binding protein (AHRD V3.3 *** A0A2K3N563_TRIPR) Solyc10g080650.3 0 0 9 0 0 1 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G3BR89_CAPCH) Solyc10g080660.3 10803 4119 3671 3764 2462 2540 2258 2189 2945 3232 3707 2966 3804 3843 5014 Eukaryotic translation initiation factor NCBP (AHRD V3.3 *** A0A2G2VVL4_CAPBA) AT5G18110 Solyc10g080670.2 921 264 126 206 10 15 23 11 102 252 301 63 208 380 649 Transmembrane protein, putative (AHRD V3.3 *** A2Q5V9_MEDTR) AT5G18130 Solyc10g080680.3 228 393 662 716 628 660 716 517 449 381 809 503 445 477 691 Adenylyl-sulfate kinase (AHRD V3.3 *** A0A2U1MP59_ARTAN),Pfam:PF01583 AT3G03900 Solyc10g080690.2 421 1355 1319 1837 841 784 509 627 2215 3334 1449 1725 1367 1009 716 Patatin (AHRD V3.3 *** A0A2G3BI67_CAPCH) Solyc10g080700.2 1539 1579 1424 1487 1943 1813 1909 2254 2028 1766 1252 1770 1569 1729 1280 Casein kinase (AHRD V3.3 *** A0A2K3P2W2_TRIPR) AT3G03940 Solyc10g080710.2 3204 3151 2675 2150 2152 2091 2060 2662 2110 2523 1930 2465 2868 2626 2378 asparaginyl-tRNA synthetase AT5G56680 Solyc10g080720.2 1579 1098 844 931 842 937 899 860 1061 1024 939 1008 1032 1000 1183 polypyrimidine tract-binding protein homolog 3 (AHRD V3.3 *** A0A2I4DWZ5_9ROSI) AT1G43190 Solyc10g080725.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g080730.3 472 271 155 282 140 165 207 103 230 247 336 196 229 172 606 Thioredoxin-like 1-1, chloroplastic (AHRD V3.3 *** A0A2G2YNL4_CAPAN) AT1G08570 Solyc10g080740.2 8513 3333 1561 2349 1450 1707 1719 1671 2247 2920 2003 2160 1833 2347 2376 Protein SMG7 (AHRD V3.3 *** A0A1U8E8Y3_CAPAN) AT5G19400 Solyc10g080750.3 0 0 0 0 0 2 1 2 0 1 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *** A0A2G2YNJ1_CAPAN) Solyc10g080760.2 79 205 314 269 465 588 488 426 239 141 220 327 262 262 221 Nudix hydrolase 16, mitochondrial (AHRD V3.3 *** A0A1U8EIF2_CAPAN) AT3G12600 Solyc10g080770.3 2796 1247 975 836 430 387 440 449 747 1046 753 557 1420 998 938 NPR1-interactor protein 1 Solyc10g080780.2 375 515 532 488 650 639 663 529 479 426 422 540 587 494 477 BZIP transcription factor (AHRD V3.3 *** E9N3N2_9POAL) Solyc10g080782.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g080784.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *** A0A2U1QA52_ARTAN) AT2G07505 Solyc10g080786.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *-* A0A2G3D6E9_CAPCH) Solyc10g080788.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP-citrate synthase beta chain protein 1 (AHRD V3.3 *-* A0A2G2WTV4_CAPBA) Solyc10g080810.2 727 908 789 886 870 890 897 937 766 964 857 880 1085 886 746 UBA domain-containing protein/Rhomboid domain-containing protein (AHRD V3.3 *** A0A1Q3DCK9_CEPFO) AT3G56740 Solyc10g150143.1 15 19 20 7 0 13 3 5 9 18 3 2 11 20 49 Cytochrome P450 (AHRD V3.3 *-* A0A2U1MI99_ARTAN) Solyc10g087040.3 2 0 0 1 0 0 0 1 0 6 0 1 0 0 1 Cytochrome P450 (AHRD V3.3 *** A2PZD4_IPONI) Solyc10g080840.1 1214 852 816 941 186 171 110 100 830 719 896 763 861 597 962 Cytochrome P450 (AHRD V3.3 *** A2PZD4_IPONI) Solyc10g080850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g150144.1 18 4 3 7 0 5 2 1 0 26 6 0 9 0 2 Cytochrome P450 (AHRD V3.3 *-* A2PZD4_IPONI) AT1G66030 Solyc10g080870.3 213 407 680 664 724 667 560 583 821 520 557 812 258 471 336 Cytochrome P450 (AHRD V3.3 *** A2PZD4_IPONI) Solyc10g080880.2 134 452 484 533 511 559 424 487 479 241 219 610 166 441 285 SlPIN7 Solyc10g080890.2 219 150 292 202 114 140 128 102 157 119 272 133 169 140 159 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4I227_ARATH) AT3G55290 Solyc10g080900.3 101 211 292 233 156 150 116 122 167 120 240 111 165 188 126 ripening related X72730 AT3G55290 Solyc10g080920.2 54 49 58 84 2 8 8 0 9 27 49 13 18 19 39 Protein RADIALIS-like 2 (AHRD V3.3 *** A0A2G2VVI4_CAPBA) Solyc10g080930.2 420 283 311 335 283 244 213 220 430 749 586 251 256 363 456 Transcription elongation factor (AHRD V3.3 *** A0A200Q6X7_9MAGN) AT5G05140 Solyc10g080940.3 1396 5065 3830 4166 5123 4567 4797 5730 5112 4707 3744 5317 4604 4789 6728 Tubulin beta chain (AHRD V3.3 *** A0A1U8EJY6_CAPAN) Solyc10g080950.2 29 465 382 628 1168 1306 1126 1339 551 220 484 721 80 265 199 cyclinB1_2 AT5G06150 Solyc10g080960.1 402 377 387 354 262 234 255 313 793 379 401 504 1009 488 449 Two-component response regulator ARR1 (AHRD V3.3 *** A0A2G3BHC7_CAPCH) AT3G10760 Solyc10g080970.2 419 566 536 587 300 347 330 410 1059 835 711 694 854 748 609 Bifunctional protein FolD 2 (AHRD V3.3 *** A0A1U8EB53_CAPAN) AT3G12290 Solyc10g080980.2 545 256 210 350 89 83 54 43 83 241 182 82 67 70 161 WAT1-related protein (AHRD V3.3 *** K4D2Y5_SOLLC) AT5G07050 Solyc10g080990.3 1 14 2 11 1 3 3 4 7 11 0 2 2 0 0 WAT1-related protein (AHRD V3.3 *** K4D2Y6_SOLLC) AT5G07050 Solyc10g081000.1 2004 1044 736 859 668 602 588 513 736 1087 1093 497 847 784 1475 Unknown protein Solyc10g081010.3 1673 2253 2729 3631 3100 3188 3664 3695 2095 3443 3078 2724 2228 2274 2194 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** Q0WVC6_ARATH) AT3G56590 Solyc10g081020.2 5297 4584 4476 3406 3723 4163 3703 4085 4976 3523 3768 4250 3815 4664 5256 Transcription elongation factor spt6 (AHRD V3.3 *** A0A1U8EIC5_CAPAN) AT1G65440 Solyc10g081030.3 4472 7009 7127 5599 6711 7495 7848 6326 4957 4205 5299 5286 9741 7817 7089 Nascent polypeptide-associated complex subunit alpha-like protein (AHRD V3.3 *** A0A2I0WF00_9ASPA) AT3G12390 Solyc10g081040.1 3 6 0 0 0 0 0 0 0 1 0 1 0 1 0 Unknown protein Solyc10g081050.1 271 277 360 276 306 314 308 300 232 263 420 284 337 296 310 Restriction endonuclease, type II-like superfamily protein (AHRD V3.3 *** A0A2U1N8F0_ARTAN) AT1G67660 Solyc10g081060.2 540 437 507 526 397 449 368 357 432 371 400 338 459 415 570 Syntaxin (AHRD V3.3 *** A0A2G3BHB1_CAPCH) Solyc10g081100.3 236 548 685 630 675 709 766 606 560 413 694 432 413 555 589 50S ribosomal protein 5, chloroplastic (AHRD V3.3 *** A0A2G2VVL1_CAPBA) AT3G56910 Solyc10g081080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g081110.3 292 243 379 373 326 448 342 307 227 306 369 216 252 262 401 RING/U-box superfamily protein (AHRD V3.3 *** Q93YQ5_ARATH) Solyc10g081120.3 814 635 670 734 516 495 523 662 967 763 717 673 628 739 1001 alpha-L-arabinofuranosidase AT3G10740 Solyc10g081130.2 777 1458 1417 1322 1906 1856 1599 1886 1548 1169 1252 1434 1769 1684 1280 Proteasome subunit alpha type (AHRD V3.3 *** K4D300_SOLLC) AT2G27020 Solyc10g081140.3 131 172 149 163 220 239 231 222 175 155 197 154 198 139 150 Kinase family protein (AHRD V3.3 *** A0A2K3P253_TRIPR) Solyc10g081150.3 286 413 346 365 689 481 563 520 412 285 378 421 415 429 371 COP9 signalosome complex subunit 2 (AHRD V3.3 *** A0A2G2YNH5_CAPAN) AT2G26990 Solyc10g081160.2 1233 2046 2263 2496 3216 3423 3309 3362 2227 1820 2279 2390 1328 1643 1995 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QTK2_9MAGN) AT5G05080 Solyc10g081170.2 1443 1523 6185 1319 1991 1847 1739 2093 1832 6841 5332 1948 2198 1834 2025 Calmodulin 2 AT3G43810 Solyc10g081180.2 2260 3946 3665 3138 3656 3447 3514 3714 2874 2564 2640 2860 5518 4532 3137 RNA-binding protein (AHRD V3.3 *-* Q941H9_TOBAC) Solyc10g081190.2 18236 11804 13743 11679 12120 12302 10578 11198 12122 16937 15224 13439 14922 12109 15068 Leucine-rich repeat receptor-like protein kinase family (AHRD V3.3 *** A0A0K9PTM3_ZOSMR) AT5G21090 Solyc10g081200.1 309 427 335 256 435 398 550 558 615 321 218 345 350 395 477 Dentin sialophosphoprotein (AHRD V3.3 *-* A0A1P8AZC3_ARATH) AT5G17910 Solyc10g081205.1 0 1 4 0 1 0 4 2 1 1 8 11 0 1 3 Unknown protein Solyc10g081210.3 6 105 109 104 126 120 162 109 72 39 67 103 104 131 33 Replication protein A 14 kDa subunit A (AHRD V3.3 *** A0A2G2YNF1_CAPAN) AT4G18590 Solyc10g081220.3 297 240 294 245 253 199 236 206 272 246 282 227 304 256 330 Chaperone protein DnaJ (AHRD V3.3 *** A0A2G3BH88_CAPCH) AT2G41000 Solyc10g081230.3 194 250 232 232 165 270 243 285 219 234 183 307 190 210 255 Presenilin (AHRD V3.3 *-* A0A2G2YNL8_CAPAN) Solyc10g081240.3 795 1452 1071 934 1034 1043 974 1130 808 690 833 935 1489 1354 1135 GrpE protein homolog (AHRD V3.3 *** A0A2G2VVH1_CAPBA) AT5G17710 Solyc10g081250.3 700 993 859 704 1061 1013 1098 1272 784 610 646 899 742 1006 559 DNA polymerase (AHRD V3.3 *** A0A2G2YNF6_CAPAN) AT5G63960 Solyc10g081260.2 705 1457 563 899 1113 899 1073 1272 1204 1084 562 1095 988 789 393 Protein DETOXIFICATION (AHRD V3.3 *** A0A2G3BHA5_CAPCH) AT3G03620 Solyc10g081270.2 462 395 494 478 431 364 360 420 422 541 410 504 414 487 404 ELMO/CED-12 family protein (AHRD V3.3 *** A0A1I9LNB6_ARATH) AT3G03610 Solyc10g081280.2 122 74 96 78 61 40 61 63 73 68 84 60 103 112 39 Protein ZINC INDUCED FACILITATOR 1 (AHRD V3.3 *-* A0A2G2YNH3_CAPAN) Solyc10g081290.2 90 44 40 73 62 52 79 33 61 41 73 52 63 76 51 Splicing factor 3B subunit 1 (AHRD V3.3 *-* A0A1Z5KQ13_FISSO) Solyc10g081300.1 21 5 11 41 11 17 28 10 17 19 59 8 22 19 6 Metacaspase-9 (AHRD V3.3 *** A0A2G3ARC5_CAPCH),Pfam:PF00656 AT5G04200 Solyc10g081310.2 2186 2166 2825 2610 2679 2803 2504 2150 2107 2682 3100 2255 2926 2563 3475 Histidine triad (HIT) protein (AHRD V3.3 *** A0A2U1PU92_ARTAN) AT3G56490 Solyc10g081320.1 25 78 87 88 251 196 175 166 125 105 159 143 185 132 196 R2R3MYB transcription factor 69 Solyc10g081330.3 1152 1603 1420 1265 1332 1487 1235 1419 1417 1291 1242 1280 1806 1455 1292 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4IIL5_ARATH) Solyc10g081340.1 38 37 35 34 1 13 7 3 25 51 110 10 18 41 146 protein PHYTOCHROME KINASE SUBSTRATE 4 (AHRD V3.3 *** A0A2I4E5I9_9ROSI) AT5G04190 Solyc10g081350.2 499 554 464 425 532 559 554 580 531 461 483 533 382 533 547 ABSCISIC ACID-INSENSITIVE 5-like protein 2 (AHRD V3.3 *** A0A2G3BGU0_CAPCH) AT3G56850 Solyc10g081360.2 250 324 363 321 377 379 344 317 310 216 323 342 455 422 324 HSP20-like chaperones superfamily protein (AHRD V3.3 *** A0A2U1L7K6_ARTAN) AT3G03773 Solyc10g081370.3 969 1915 2289 1730 2148 2673 2562 1827 1300 951 1916 1469 2206 1856 2081 Unknown protein Solyc10g081380.2 135 208 185 198 213 256 227 145 182 174 167 139 225 206 147 DnaJ/Hsp40 cysteine-rich domain superfamily protein (AHRD V3.3 *** B6T2N0_MAIZE) AT5G17840 Solyc10g081390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g081410.2 322 293 314 445 232 356 310 288 260 294 365 296 242 307 399 Protein PLANT CADMIUM RESISTANCE like (AHRD V3.3 *** A0A2R6QVJ1_ACTCH) AT2G40935 Solyc10g081420.2 313 287 339 311 389 451 564 398 274 263 326 337 353 368 412 Protein kinase (AHRD V3.3 *** Q2HVC0_MEDTR) AT3G03770 Solyc10g081430.2 15 35 31 21 71 85 89 93 45 18 43 39 36 36 8 Exostosin-like (AHRD V3.3 *** A0A200QEG6_9MAGN) AT3G45400 Solyc10g081440.2 888 2740 2105 2552 3496 3124 3510 3615 3395 2246 1964 3345 2646 2672 1696 NADH-cytochrome b5 reductase (AHRD V3.3 *** K4D331_SOLLC) AT5G17770 Solyc10g081450.2 48 84 85 48 59 79 64 75 70 64 60 81 77 84 60 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LTX8_ARTAN) AT5G17780 Solyc10g081460.2 3281 2093 1993 2943 1970 1966 2038 1738 1673 2253 1990 1498 2028 2144 2600 Cationic amino acid transporter 2 (AHRD V3.3 *** A0A2R3U877_CAMSI) AT1G58030 Solyc10g081470.2 239 440 564 597 347 461 481 488 485 407 433 547 437 468 371 lutescent-2 AT5G35220 Solyc10g081480.2 474 367 785 758 508 525 580 446 540 641 1000 668 404 518 866 maltase-glucoamylase%2C intestinal protein (AHRD V3.3 *** AT5G37480.2) AT5G37480 Solyc10g081490.2 68 88 145 99 81 71 74 81 133 83 183 159 114 57 86 R2R3MYB transcription factor 60 AT1G08810 Solyc10g081500.1 0 9 0 0 0 2 0 0 1 1 0 0 2 0 15 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1MHZ3_ARTAN) Solyc10g081510.2 7274 35025 15286 19972 29942 23727 25961 34471 28932 20126 12767 18174 30768 22991 19435 ethylene-responsive methionine synthase AT5G17920 Solyc10g081520.1 0 0 1 1 0 0 0 4 0 0 0 0 0 0 0 Blue copper protein (AHRD V3.3 *** A0A0M4FTF3_9SOLA) AT1G45063 Solyc10g081530.2 1944 3306 2739 2940 3366 3009 2957 3652 3185 3306 2111 2884 3582 2590 2700 V-type proton ATPase subunit (AHRD V3.3 *** A0A1U8FH10_CAPAN) AT3G28715 Solyc10g081540.2 305 307 316 245 263 208 263 263 247 164 192 275 419 387 341 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 (AHRD V3.3 *** A0A2G2YNC7_CAPAN) AT3G59630 Solyc10g081550.2 0 0 16 2 5 5 10 5 0 1 1 0 3 26 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1Q1Z2_ARTAN) Solyc10g081560.3 2 0 8 2 0 12 4 3 0 5 2 0 0 3 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IKL5_ARATH),Pfam:PF13561 Solyc10g081570.3 1572 600 8677 507 300 440 252 222 709 541 12511 490 451 689 2418 Marmande Solyc10g081575.1 56 41 184 19 18 34 12 21 23 49 148 30 13 18 35 Unknown protein Solyc10g081580.3 1057 959 1252 995 1061 1024 932 966 1246 850 1113 889 881 922 1303 Syntaxin (AHRD V3.3 *** A0F0A7_NICBE) AT5G08080 Solyc10g081590.2 797 1153 1022 932 999 876 1031 1036 835 687 685 839 1201 1089 824 Protein-lysine N-methyltransferase (AHRD V3.3 *** B6T9S3_MAIZE),Pfam:PF10237 AT3G58470 Solyc10g081600.2 756 933 948 1111 1154 1161 1153 1059 999 974 1027 1066 1065 908 1036 rhomboid-like protein 15 (AHRD V3.3 *** A0A2I4GY62_9ROSI) AT3G58460 Solyc10g081605.1 0 0 0 0 0 0 1 0 0 0 3 1 0 5 0 Unknown protein Solyc10g081610.2 2898 3160 2279 2399 2410 2360 2500 2835 3077 2523 1924 2355 2927 3228 2913 Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** A0A2G2YN95_CAPAN) AT5G06600 Solyc10g081620.2 1075 732 646 562 572 603 553 478 634 658 674 643 811 637 679 Myosin-binding protein 7 (AHRD V3.3 *** A0A1U8FFJ8_CAPAN) AT5G06560 Solyc10g081630.2 153 272 293 209 318 351 364 285 284 136 325 268 246 291 225 F-box protein (AHRD V3.3 *** A0A1U8F6X6_CAPAN) AT5G06550 Solyc10g081640.3 4 11 35 10 0 18 14 9 7 2 10 11 7 8 4 Calcium-dependent protein kinase (AHRD V3.3 *** B8QUH1_GOSHI) Solyc10g081650.2 1180 829 683 870 770 790 839 744 768 866 871 717 618 754 672 carotenoid isomerase AT1G06820 Solyc10g081660.2 1379 1445 1640 1576 1432 1739 1743 1445 1669 1530 1728 1512 1568 1724 2119 sucrose phosphatase AF493563 AT2G35840 Solyc10g081670.2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 --* AT1G70540.1) Solyc10g081680.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Unknown protein Solyc10g081690.1 0 0 11 0 0 2 0 2 0 0 2 0 0 0 0 Transmembrane protein (AHRD V3.3 *** Q9FT46_ARATH) AT3G52360 Solyc10g081700.3 84 225 299 301 715 765 818 622 451 233 318 403 340 298 191 hypothetical protein (AHRD V3.3 *-* AT2G27180.1) AT3G11690 Solyc10g081705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3L8G7_TRIPR) Solyc10g081710.2 2740 2095 2205 3172 2310 2095 2839 2197 1659 2236 2230 2048 1741 2179 2230 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8BE16_ARATH) Solyc10g081720.2 1921 3745 4051 4093 4033 3570 3424 4260 5422 5303 4246 4571 4004 2521 3209 Fasciclin-like arabinogalactan protein 17 (AHRD V3.3 *** A0A2G3AVK5_CAPCH) AT5G06390 Solyc10g081730.2 448 1338 1058 1375 2664 2593 2828 2610 2186 1057 2343 1689 942 1245 1696 Protein WVD2-like 1 (AHRD V3.3 *** A0A2G3AVM2_CAPCH) AT2G35880 Solyc10g081740.3 12 8 17 2 3 9 18 8 8 5 17 6 8 17 3 Calcium-dependent protein kinase (AHRD V3.3 *** B8QUH1_GOSHI) Solyc10g081745.1 0 1 9 1 0 0 1 5 1 0 0 1 8 4 0 Unknown protein Solyc10g081750.1 641 547 646 509 556 497 527 428 467 485 756 485 732 527 804 Mal d 1-associated protein (AHRD V3.3 *** AT2G35900.1) AT2G35900 Solyc10g081760.3 6 8 7 3 11 16 8 15 10 2 3 2 18 12 18 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (AHRD V3.3 *-* A0A1P8BEQ3_ARATH) Solyc10g081770.3 54 82 170 189 111 158 134 82 85 58 177 53 41 85 266 Polyketide cyclase/dehydrase/lipid transport superfamily protein (AHRD V3.3 *** F4K3U5_ARATH) AT5G06440 Solyc10g081780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING-H2 finger protein ATL70 (AHRD V3.3 *** A0A2G3AVP6_CAPCH) Solyc10g081790.1 2 4 5 10 1 0 0 0 1 3 0 2 8 0 7 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1MY73_ARTAN) AT2G35910 Solyc10g081800.2 11 6 11 8 3 15 8 1 25 5 17 39 8 33 11 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein (AHRD V3.3 *** A0A2U1NF61_ARTAN) AT5G06480 Solyc10g081810.3 2 0 0 4 0 8 7 4 2 0 0 8 1 4 2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein (AHRD V3.3 *** A0A2U1NF61_ARTAN) AT5G06480 Solyc10g081820.3 472 691 656 679 817 834 796 1012 750 723 763 769 662 584 458 Expp1 protein (AHRD V3.3 *** Q8VZ18_ARATH) AT3G44150 Solyc10g081830.3 1347 749 643 580 623 644 606 783 468 650 556 752 674 687 528 Replication protein A 32 kDa subunit B (AHRD V3.3 *** A0A2G3AVL9_CAPCH) AT3G02920 Solyc10g081840.3 849 174 210 229 19 43 34 15 156 371 223 171 155 364 836 Nuclear transcription factor Y subunit A (AHRD V3.3 *-* A0A2U1KQ27_ARTAN) Solyc10g081850.3 292 278 253 289 256 260 172 235 274 297 261 194 360 264 368 syntaxin-121-like (AHRD V3.3 *** A0A2I4H4W7_9ROSI) AT3G11820 Solyc10g081860.1 123 70 108 101 68 107 108 70 73 63 115 78 97 107 103 Unknown protein Solyc10g081870.3 105 54 61 112 53 110 136 42 53 56 58 73 76 110 89 Digalactosyldiacylglycerol synthase 1, chloroplastic (AHRD V3.3 *-* A0A1U8EIN3_CAPAN) Solyc10g081875.1 28 29 44 33 46 44 39 33 38 29 35 32 22 31 39 Unknown protein Solyc10g081880.3 246 197 130 260 232 177 213 291 236 235 109 248 114 150 165 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PNG9_9MAGN) AT5G65560 Solyc10g081890.2 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 Aluminum-activated malate transporter (AHRD V3.3 *** A0A200Q9N0_9MAGN) AT3G11680 Solyc10g081900.3 743 633 575 581 523 489 481 418 560 600 430 449 697 531 612 Digalactosyldiacylglycerol synthase 1, chloroplastic (AHRD V3.3 *** A0A2G3AV75_CAPCH) Solyc10g081910.2 573 494 462 556 671 598 614 617 613 585 415 566 372 458 504 Receptor-like kinase (AHRD V3.3 *** A0A2R6Q427_ACTCH) Solyc10g081920.2 775 1961 1270 1460 2121 2033 1999 2786 2556 1503 1121 1705 1822 1731 1425 Coatomer subunit beta (AHRD V3.3 *** A0A1U8EI71_CAPAN) AT4G31490 Solyc10g081930.1 21 1 5 7 7 8 4 1 11 4 5 4 13 13 17 Cytoplasmic FMR1 interacting protein (AHRD V3.3 *-* A0A1Y1I7X8_KLENI) Solyc10g081940.2 0 0 0 0 0 0 0 0 0 1 0 0 1 0 2 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1S3WZ57_TOBAC) AT5G52340 Solyc10g081950.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g150145.1 1675 1224 1017 1645 805 694 720 868 984 2096 1591 775 1420 1012 2572 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9SVC8_ARATH) AT3G52470 Solyc10g081970.2 9 2 0 0 0 0 0 0 11 5 0 1 3 6 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** A0A2U1KP17_ARTAN) AT5G06320 Solyc10g081980.2 384 92 169 53 8 5 6 8 66 55 429 63 122 113 173 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** A0A2U1KP17_ARTAN) AT5G06320 Solyc10g081990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Splicing factor 3B subunit 4 (AHRD V3.3 *-* A0A1J3HL99_NOCCA) Solyc10g082000.3 110 109 165 77 78 84 69 65 88 113 156 51 100 99 85 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* A0A2U1KPR9_ARTAN) AT3G52490 Solyc10g082010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2K3P6V3_TRIPR) Solyc10g082020.2 74 57 44 50 25 33 23 47 18 47 45 50 41 32 61 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** A0A2G2YN81_CAPAN) AT5G06300 Solyc10g082030.2 1140 2918 2447 2326 3053 2664 2861 3267 3082 2140 2052 2697 2626 2432 2137 Peroxiredoxin (AHRD V3.3 *** Q9FE12_PHAVU) AT5G06290 Solyc10g082040.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 HVA22-like protein (AHRD V3.3 *** A0A1U8ENC8_CAPAN) AT2G36020 Solyc10g082050.1 68 79 151 106 87 62 69 34 65 134 179 97 64 56 18 ovate family protein 21 AT2G36026 Solyc10g082060.1 0 3 0 4 0 3 5 8 6 0 1 1 0 0 0 ovate family protein 22 Solyc10g082061.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g082062.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g082063.1 0 0 0 0 0 0 0 1 6 1 0 1 5 0 0 Transcription factor TCP17 (AHRD V3.3 *** A0A2G2XCG4_CAPBA) Solyc10g082064.1 739 361 430 402 568 419 285 358 498 563 490 311 657 265 528 furry (AHRD V3.3 *** AT5G08060.1) AT5G08060 Solyc10g082066.1 69 33 10 3 0 0 2 2 14 24 13 9 80 32 6 receptor-like protein kinase (AHRD V3.3 *-* A0A1U7WU94_NICSY) Solyc10g082068.1 39 21 51 28 37 61 46 25 28 34 29 16 21 24 62 Unknown protein Solyc10g083060.1 6 1 8 0 2 1 3 0 0 0 1 1 3 5 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AHRD V3.3 *-* F4J8X6_ARATH) Solyc10g083063.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 Unknown protein Solyc10g083067.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g083070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ovate family protein 23 Solyc10g083080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ovate family protein 26 Solyc10g083090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ovate family protein 27 Solyc10g083100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ovate family protein 28 Solyc10g083110.3 2118 1430 975 782 895 808 786 957 1029 896 792 1028 1311 1242 893 4-hydroxy-tetrahydrodipicolinate synthase (AHRD V3.3 *** Q1PDD5_9ORYZ) AT2G45440 Solyc10g083120.3 1271 1252 1462 1166 1248 1337 1235 1063 873 1218 1300 973 1751 1269 1487 Ubiquitin-conjugating enzyme variant (AHRD V3.3 *** C8CP48_CITSI) AT3G52560 Solyc10g083130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g083140.1 671 696 402 479 247 294 263 283 283 374 592 428 330 355 259 hypothetical protein (AHRD V3.3 *-* AT5G06270.2) Solyc10g083150.3 11280 4831 3935 4172 2951 3096 3245 3437 3677 4267 3716 4086 4669 4720 5235 DWNN domain, a CCHC-type zinc finger (AHRD V3.3 *** A0A2U1LZ01_ARTAN) AT5G47430 Solyc10g083160.2 1461 866 732 795 798 667 650 662 846 1097 789 758 912 745 911 TLD-domain containing nucleolar protein (AHRD V3.3 *** A0A1P8BAM8_ARATH) AT5G06260 Solyc10g150146.1 952 2478 1939 1475 2540 2583 2142 2344 1501 1114 1407 1769 2473 1999 1518 40S ribosomal protein S17 (AHRD V3.3 *** Q6RJY3_CAPAN) AT5G04800 Solyc10g083170.2 10 31 22 20 65 32 19 46 40 23 13 17 22 31 15 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1QER6_ARTAN),Pfam:PF13561 Solyc10g083180.2 219 139 217 164 136 175 173 156 136 116 124 114 123 129 198 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PL19_ARTAN),Pfam:PF13561 Solyc10g083190.3 2437 1771 1445 1429 1497 1542 1641 1369 1563 1466 1788 1450 1372 1549 2085 Plant/F24K9-26 protein (AHRD V3.3 *** A0A072UED0_MEDTR) AT3G11590 Solyc10g083200.2 1480 2096 1618 2210 2004 1993 2196 2816 1962 2629 1587 2365 1838 1904 1470 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein (AHRD V3.3 *** AT4G31200.3) AT4G31200 Solyc10g083210.2 165 123 111 99 80 92 94 98 145 181 78 62 107 102 109 B3 domain-containing protein (AHRD V3.3 *** A0A2G3BGS5_CAPCH) AT2G36080 Solyc10g083220.3 152 147 217 171 175 233 251 246 151 127 190 144 188 195 204 Embryo defective 2735 (AHRD V3.3 *** Q9FFZ3_ARATH) AT5G06240 Solyc10g083230.1 38 27 23 16 27 14 12 17 8 18 9 12 27 22 13 F-box family protein (AHRD V3.3 *** A0A2U1LJ24_ARTAN) AT2G36090 Solyc10g083240.2 610 494 500 425 428 505 466 421 436 379 462 390 494 552 682 RNA-binding protein (AHRD V3.3 *-* Q941H9_TOBAC) AT5G06210 Solyc10g083250.2 0 0 4 0 0 0 0 1 1 0 0 0 0 0 0 Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_TOBAC) AT3G11550 Solyc10g083260.1 196 94 82 77 179 170 167 163 60 138 107 99 138 134 183 Senescence regulator (AHRD V3.3 *-* B6TEP1_MAIZE) Solyc10g083270.3 249 186 257 180 241 198 180 208 249 251 275 179 213 200 268 Alpha/beta hydrolase domain-containing protein 11 (AHRD V3.3 *** A0A1J3FM67_NOCCA) AT3G52570 Solyc10g083280.4 2871 5488 5149 4019 5774 5686 5522 4952 3491 3100 4201 4034 5489 4948 4269 Ribosomal protein S11 (AHRD V3.3 *** A0A200Q0S8_9MAGN) AT3G11510 Solyc10g083290.4 443 247 476 88 129 179 177 193 167 395 406 48 458 369 77 invertase 6 AT3G52600 Solyc10g083300.2 5 56 23 4 58 27 45 47 30 6 29 15 4 12 60 invertase 8 AT3G52600 Solyc10g083310.2 46 410 298 461 645 715 834 822 418 286 408 647 95 312 243 Kinesin-like protein (AHRD V3.3 *** A0A2G2YN20_CAPAN) AT2G36200 Solyc10g083320.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Small auxin up-regulated RNA82 AT2G36210 Solyc10g083330.1 93 264 129 188 624 659 661 618 254 69 200 223 112 161 112 hypothetical protein (AHRD V3.3 *** AT2G36220.1) AT2G36220 Solyc10g083340.3 26 30 95 80 40 20 33 21 18 35 96 23 51 36 183 Myb family transcription factor APL (AHRD V3.3 *** A0A2G2YMX5_CAPAN) AT5G18240 Solyc10g083350.2 64 98 59 104 92 92 96 70 114 89 90 132 67 105 172 Heme-binding-like protein, chloroplastic (AHRD V3.3 *** A0A1U8EAT6_CAPAN) AT3G10130 Solyc10g083360.2 2164 1834 1154 1451 1547 1434 1258 1697 1869 2059 1757 1321 2273 1451 1669 Calmodulin-binding family protein, putative, expressed (AHRD V3.3 *** Q2QXN6_ORYSJ) AT3G52870 Solyc10g083370.1 197 52 79 68 23 25 18 6 83 184 80 69 41 59 131 Unknown protein Solyc10g083380.2 1922 466 1454 1464 204 291 317 141 438 881 1956 550 223 660 2318 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *-* Q8L5Y2_ARATH) Solyc10g083390.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1MVU3_ARTAN) AT1G24480 Solyc10g083395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g083400.1 2 2 0 0 0 0 0 0 0 14 0 0 0 0 8 Cytochrome P450 (AHRD V3.3 *** A0A200Q6A4_9MAGN) AT2G27690 Solyc10g083410.1 0 4 5 3 4 6 0 5 4 0 6 6 0 3 0 Peptidoglycan-binding LysM domain-containing protein (AHRD V3.3 *** A0A2U1LRW5_ARTAN) AT3G52790 Solyc10g083420.2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Inosine/uridine-preferring nucleoside hydrolase domain-containing protein (AHRD V3.3 *** A0A2U1L4C1_ARTAN) Solyc10g083430.2 0 0 0 1 0 0 0 1 0 0 0 1 2 0 0 Inosine/uridine-preferring nucleoside hydrolase domain (AHRD V3.3 *** A0A200Q692_9MAGN) Solyc10g083440.2 436 1976 496 926 1368 1067 1017 1456 2152 908 614 1881 1939 1318 1064 Glycosyltransferase (AHRD V3.3 *** A0A2G3BGM7_CAPCH) Solyc10g083450.3 25 3 0 0 0 0 0 0 5 1 0 0 0 2 0 NAC domain protein (AHRD V3.3 *-* S5RDR3_9ROSA) Solyc10g083460.1 740 331 175 218 187 221 207 150 230 283 141 131 274 203 525 Zinc finger A20 and AN1 domain-containing stress-associated protein (AHRD V3.3 *** V5PZR5_9CARY) AT2G36320 Solyc10g083470.2 984 433 465 627 187 294 301 214 269 326 430 241 230 407 784 E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *** A0A1B1LUK2_VITPS) AT4G12570 Solyc10g083480.2 385 316 341 394 382 363 370 344 341 321 320 314 235 334 345 F-box/LRR-repeat protein (AHRD V3.3 *** A0A1U8EHX8_CAPAN) AT1G67190 Solyc10g083490.3 781 1444 1432 1465 1678 1960 2095 1860 1338 1246 1241 1596 1457 1551 1452 Cell division protein FtsZ (AHRD V3.3 *** A0A2G2VUU5_CAPBA) AT2G36250 Solyc10g083500.2 2560 3909 3725 3537 5318 5234 5579 6045 4798 3747 3560 5026 3434 4113 3760 Protein kinase G11A (AHRD V3.3 *** A0A2G2YMZ1_CAPAN) AT2G36350 Solyc10g083510.2 166 555 718 660 1183 1106 902 1341 731 283 385 1060 433 673 261 Growth-regulating factor 3 (AHRD V3.3 *** A0A2G2VUQ5_CAPBA) AT2G36400 Solyc10g083520.2 1185 1056 994 1058 1040 1096 1186 1035 1251 821 1074 871 1230 1090 1169 Transcriptional activator (DUF662) (AHRD V3.3 *** Q3EBM1_ARATH) AT3G09980 Solyc10g083530.2 169 115 170 175 113 68 93 79 253 149 179 156 172 162 144 histone-lysine N-methyltransferase SETD1B-like protein (AHRD V3.3 *** AT5G03670.1) AT5G03670 Solyc10g083540.3 0 4 0 2 0 1 4 2 3 0 2 7 0 0 0 Threonine dehydratase (AHRD V3.3 *** A0A1U8EAN1_CAPAN) AT3G10050 Solyc10g083550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutamine synthetase (AHRD V3.3 *** I6WUR4_CAMSI) Solyc10g083560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3BGB2_CAPCH) AT2G36450 Solyc10g083570.3 1720 6771 3779 4032 5837 5276 5411 6206 4462 3837 3651 4467 6668 5902 3471 Fructose-bisphosphate aldolase (AHRD V3.3 *** A0A1U8EHW1_CAPAN) AT2G36460 Solyc10g083580.2 4 0 12 1 0 0 0 0 2 2 2 7 0 2 14 PHYTOSULFOKINE 3 PRECURSOR (AHRD V3.3 *-* AT3G44735.2) Solyc10g083590.2 1478 1413 1208 1315 1609 1629 1535 1852 1509 1580 1164 1601 1303 1440 1000 Polyadenylation and cleavage factor-like protein 4 (AHRD V3.3 *** A0A1J3JME1_NOCCA) AT2G36480 Solyc10g083600.2 909 1322 1152 703 673 753 788 639 744 474 714 741 1735 1472 1050 Ribosome production factor 2-like protein (AHRD V3.3 *** A0A2G2VUP6_CAPBA) AT3G23620 Solyc10g083610.2 854 706 659 790 702 825 816 722 812 833 744 643 695 804 679 ethylene-inducible CTR1-like protein kinase AT5G03730 Solyc10g083620.2 1 0 4 0 2 1 4 9 3 0 0 0 0 2 0 Unknown protein Solyc10g083630.2 1735 2520 2867 2904 3346 3469 3633 3882 4621 3045 3101 3476 2659 3234 2801 DNA demethylase 2 AT5G04560 Solyc10g083640.2 5230 3788 2249 2149 2489 2136 1913 2466 2894 2634 2215 2524 3494 3158 2526 Zinc finger transcription factor 64 AT1G27650 Solyc10g083650.1 1118 2217 1094 2654 1803 1324 1452 2100 1768 2184 1440 2185 1623 1801 839 Peroxiredoxin-2E, chloroplastic (AHRD V3.3 *** A0A2G2YMS7_CAPAN) AT3G52960 Solyc10g083660.1 0 0 0 3 3 0 0 1 1 0 0 0 0 0 1 Unknown protein Solyc10g083670.3 80 317 162 326 148 164 130 161 431 609 347 258 379 125 292 Glucomannan 4-beta-mannosyltransferase 2 (AHRD V3.3 *** A0A2G3BGF1_CAPCH) AT5G03760 Solyc10g083690.3 17 28 10 9 0 2 7 5 14 13 7 12 10 13 22 Cytochrome P450 (AHRD V3.3 *** Q8H0I8_PETHY) Solyc10g083700.4 6 3 0 9 4 1 0 0 0 7 6 0 3 5 41 Cytochrome P450 (AHRD V3.3 *** Q8H0I8_PETHY) Solyc10g083710.2 1140 451 495 477 374 393 366 264 419 517 539 419 395 491 514 3-deoxy-D-manno-octulosonic-acid transferase (AHRD V3.3 *** A0A200R573_9MAGN) AT5G03770 Solyc10g083720.3 1278 2657 2565 2514 2411 2433 2614 2635 2210 1678 1929 1789 3117 2562 2171 Pyruvate kinase (AHRD V3.3 *** A0A1U8EAH7_CAPAN) AT3G52990 Solyc10g083730.2 1454 694 815 838 311 329 301 187 698 713 1605 626 576 663 1911 F-box protein PP2-A15 (AHRD V3.3 *** A0A2G2VV31_CAPBA) AT3G53000 Solyc10g083740.3 2389 4963 3537 3137 4135 3937 3969 3567 2323 2029 3155 2914 5436 4700 3070 60S ribosomal protein L24 (AHRD V3.3 *** A0A2G2VU23_CAPBA) AT3G53020 Solyc10g083750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exostosin family protein (AHRD V3.3 *** A0A2U1KQ90_ARTAN) AT5G03795 Solyc10g083760.3 11329 5817 4175 4744 3095 3454 3352 3185 5176 5060 4545 4144 3473 4296 5902 chloroplast threonine deaminase 1 precursor AT3G10050 Solyc10g083770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein pelota homolog (AHRD V3.3 *** A0A2G3CEA2_CAPCH) Solyc10g083780.1 817 618 561 515 541 376 420 446 562 555 619 530 756 565 574 Vacuolar protein-sorting-associated protein 37-like protein 2 (AHRD V3.3 *** A0A2G2VUZ8_CAPBA) AT3G53120 Solyc10g083790.3 292 325 295 399 451 421 608 466 422 314 388 328 251 369 312 CYP97C11 AT3G53130 Solyc10g083800.2 1309 1197 1277 1220 1039 1330 1325 1096 1059 891 1046 873 1133 1273 1215 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein (AHRD V3.3 *** Q8RWG0_ARATH) AT2G36720 Solyc10g083820.2 0 4 0 2 0 3 1 2 2 0 0 1 1 0 7 Pectinesterase (AHRD V3.3 *** A0A2G2YMM6_CAPAN) AT2G36710 Solyc10g083840.1 604 700 618 645 652 659 656 796 745 578 464 670 791 686 433 Glutamine synthetase (AHRD V3.3 *** I6WUR4_CAMSI) AT3G53180 Solyc10g083850.3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 4 Glutamine synthetase (AHRD V3.3 *** I6WUR4_CAMSI) Solyc10g083860.3 266 225 36 171 2 6 6 3 106 47 45 21 109 69 116 Glycosyltransferase (AHRD V3.3 *** A0A2I4E2Y0_9ROSI) Solyc10g083870.2 2054 1879 1768 1459 1269 1408 1486 1179 1003 1200 1534 1364 1850 1683 1780 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2U1KVX6_ARTAN) Solyc10g083880.2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 tonoplast intrinsic protein 1.3 AT2G36830 Solyc10g083890.2 6 6 15 1 15 9 9 10 8 17 2 7 21 0 1 Alpha carbonic anhydrase 7 (AHRD V3.3 *** A0A2G2YMM8_CAPAN) Solyc10g083900.2 3 2 8 4 0 3 2 0 2 2 6 0 5 4 0 R2R3MYB transcription factor 27 Solyc10g083910.3 291 412 294 348 487 452 477 412 326 292 320 384 451 408 365 hypothetical protein (AHRD V3.3 *** AT2G36835.1) AT2G36835 Solyc10g083920.2 1110 750 846 848 802 742 833 722 765 941 877 638 734 862 915 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *** A0A2G2VUQ8_CAPBA) AT3G09880 Solyc10g083930.2 571 518 469 483 500 411 400 407 534 465 579 391 605 565 489 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2G2VUK9_CAPBA) AT3G66654 Solyc10g083940.1 10 190 13 57 65 37 69 45 63 93 35 34 38 26 34 Major facilitator superfamily (AHRD V3.3 *** A0A2U1KPS1_ARTAN) Solyc10g083950.1 117 82 66 96 56 58 94 83 109 107 70 114 120 120 74 Major facilitator superfamily (AHRD V3.3 *** A0A2U1PF99_ARTAN) Solyc10g083960.2 261 261 334 272 223 311 312 207 273 218 322 194 225 393 305 Phosphoadenosine phosphosulfate (PAPS) reductase family protein (AHRD V3.3 *** Q9LZE4_ARATH) AT5G03430 Solyc10g083970.1 1007 4294 3952 2571 2760 2805 3210 2906 4677 2314 5612 2722 3585 3308 4204 S-adenosylmethionine synthase (AHRD V3.3 *** A0A1U8EAC9_CAPAN) AT2G36880 Solyc10g083980.1 4 0 13 0 0 1 1 0 1 0 0 2 0 0 1 2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A2K3KHE7_TRIPR) Solyc10g083990.2 152 100 173 138 115 91 144 110 120 215 171 150 138 102 152 D-tagatose-1%2C6-bisphosphate aldolase subunit (AHRD V3.3 *** AT2G36895.1) AT2G36895 Solyc10g084000.3 50 73 260 61 91 67 70 86 70 58 267 122 63 99 252 heavy metal-associated isoprenylated plant protein 3-like (AHRD V3.3 *** A0A1U8EC89_CAPAN) Solyc10g084010.1 0 5 11 6 0 0 3 1 1 5 7 0 0 0 4 Auxin-induced protein (AHRD V3.3 *** A0A200R5L6_9MAGN) Solyc10g084020.1 4 14 111 12 6 10 9 3 20 32 279 8 24 2 25 SAUR-like auxin-responsive protein family (AHRD V3.3 *** A0A2U1NT85_ARTAN) Solyc10g150147.1 0 0 13 1 0 0 0 0 1 2 0 0 0 0 0 SAUR-like auxin-responsive protein family (AHRD V3.3 *** A0A2U1NT85_ARTAN) Solyc10g150148.1 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 SAUR-like auxin-responsive protein family (AHRD V3.3 *** A0A2U1NT85_ARTAN) Solyc10g084040.2 93 190 173 169 204 164 197 239 204 216 163 230 185 155 124 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic (AHRD V3.3 *** A0A2G2YMG0_CAPAN) AT5G52970 Solyc10g084050.2 1831 2616 2030 2165 2145 1864 2097 2383 3918 2834 2083 2295 3246 2827 2216 Cell division cycle protein 48-like protein (AHRD V3.3 *** A0A2G3BG70_CAPCH) AT5G03340 Solyc10g084060.2 70 32 58 31 37 21 42 25 31 51 39 30 69 60 19 cysteine-rich/transmembrane domain A-like protein (AHRD V3.3 -** AT2G32210.1) AT5G04080 Solyc10g084070.1 40 21 80 36 7 15 10 8 17 19 36 5 27 23 22 Unknown protein Solyc10g084080.3 204 101 84 115 100 89 95 109 104 90 156 88 106 166 137 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R5Q2_9MAGN) AT2G32630 Solyc10g084090.3 329 344 231 229 333 292 281 342 272 223 195 248 242 255 242 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R5Q2_9MAGN) Solyc10g084100.2 498 191 185 116 78 121 111 95 176 351 272 215 147 173 122 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1PM96_ARTAN) AT3G09770 Solyc10g084110.2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Pkinase domain-containing protein (AHRD V3.3 *** A0A1Q3B9U2_CEPFO) Solyc10g084120.2 7 4 3 9 18 3 15 2 4 2 0 0 8 8 0 plasma membrane intrinsic protein 2.5 AT3G53420 Solyc10g084125.1 1 2 19 2 2 9 4 0 1 0 0 1 0 6 11 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc10g084140.2 1749 1005 640 848 652 683 604 614 783 1142 745 600 830 881 1059 Ferrochelatase (AHRD V3.3 *** A0A2G3BRU7_CAPCH) AT5G26030 Solyc10g084150.2 474 327 284 386 282 419 297 374 320 209 325 529 316 354 216 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** A0A2G2VTW3_CAPBA) AT2G28305 Solyc10g084160.2 1442 1171 1188 911 801 905 906 899 844 762 1030 894 1419 1345 1186 Small RNA degrading nuclease 3 (AHRD V3.3 *** A0A2G2YMC1_CAPAN) AT5G67240 Solyc10g084170.1 24 10 15 3 9 9 14 17 18 13 33 12 24 7 10 Bag family molecular chaperone regulator mitochondrial-like (AHRD V3.3 *** A0A2K3P7D1_TRIPR) Solyc10g084180.2 719 1914 1317 1416 4046 3507 4105 3723 1832 953 1813 1734 1224 1360 681 Protein indeterminate-domain 2 (AHRD V3.3 *** A0A2G3BGA0_CAPCH) AT5G03150 Solyc10g084190.1 0 4 0 5 7 16 12 10 0 0 0 0 0 2 0 Unknown protein Solyc10g084200.2 0 50 4 6 60 27 26 58 1 0 0 2 0 2 0 Peroxidase (AHRD V3.3 *** K4D3K6_SOLLC) AT4G26010 Solyc10g084210.2 577 1078 839 743 1257 1062 1020 1292 1126 865 633 873 1078 959 753 Syntaxin (AHRD V3.3 *** A0A2G3BG85_CAPCH) AT3G09740 Solyc10g084220.3 518 383 281 219 283 266 255 281 333 345 227 312 235 340 233 Protein FAR1-RELATED SEQUENCE 7 (AHRD V3.3 *** A0A2G2VTX9_CAPBA) AT3G06250 Solyc10g084230.2 8 5 1 8 0 3 0 0 0 0 0 2 0 3 5 hypothetical protein (DUF1685) (AHRD V3.3 *** AT1G05870.9) Solyc10g084240.3 4 0 3 0 0 0 0 0 0 0 0 0 0 6 6 Peroxidase (AHRD V3.3 *** K4D3L0_SOLLC) AT2G37130 Solyc10g084250.1 102 233 295 350 389 415 409 405 334 120 391 344 150 197 274 Lectin receptor kinase-like protein (AHRD V3.3 *** S8CIF7_9LAMI) AT3G53380 Solyc10g084260.3 411 300 272 296 358 289 278 336 288 411 259 263 342 307 289 Cell number regulator 8 (AHRD V3.3 *** A0A2G2VTX3_CAPBA) AT2G37110 Solyc10g150149.1 4 54 26 51 99 117 89 55 45 11 32 20 11 11 7 transmembrane protein (AHRD V3.3 --* AT5G03120.2) AT5G03120 Solyc10g084270.2 1008 951 920 771 1111 1069 950 1181 1046 924 704 1024 878 1036 635 Importin subunit alpha (AHRD V3.3 *** A0A2G2VTX5_CAPBA) AT5G03070 Solyc10g084280.2 549 2164 2034 2037 2112 2158 2599 2215 2443 1210 3152 1524 963 1568 2734 SUN-like protein 29 AT5G03040 Solyc10g084290.2 168 712 913 712 1688 1922 1584 1821 828 600 853 1403 423 848 442 Interactor of constitutive active ROPs (AHRD V3.3 *** A0A2K3PRJ7_TRIPR) AT2G37080 Solyc10g084310.2 1574 2270 2868 2113 2333 2563 2602 1936 1691 1571 2263 2127 2602 2451 2950 Ribosomal protein S23 (AHRD V3.3 *** A8IJQ4_CHLRE) AT5G02960 Solyc10g084320.3 865 4984 3915 3161 10711 8317 8595 12044 19336 5572 5705 13346 1781 5435 1476 Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC) AT5G67090 Solyc10g084330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g084340.2 93 102 100 206 115 159 139 140 102 105 224 181 88 128 117 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A220QTH6_9SOLA) Solyc10g084350.2 5765 9345 5718 4465 6427 5767 5421 7612 5553 6201 3768 6307 7738 7090 4553 60S ribosomal protein L4 (AHRD V3.3 *** A0A2G2VZK1_CAPBA) AT3G09630 Solyc10g084360.1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 Unknown protein Solyc10g084370.3 4689 2349 48 1231 1704 1382 1221 1702 1137 1852 27 568 929 191 154 Homeodomain-like superfamily protein (AHRD V3.3 *** A0A1I9LS15_ARATH) AT3G09600 Solyc10g084380.1 405 975 662 750 2369 2532 2503 2033 685 360 602 776 691 614 534 WRKY transcription factor 44 AT2G37260 Solyc10g084390.2 3 0 8 5 16 13 17 13 3 3 0 16 11 5 0 Protein kinase domain (AHRD V3.3 *** A0A200R663_9MAGN) Solyc10g084400.2 1293 922 804 760 442 313 304 346 1144 1113 871 840 1607 817 877 Glutathione S-transferase (AHRD V3.3 *** Q76KW1_PEA) AT5G02790 Solyc10g084410.2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1Q2B2_ARTAN) AT3G12620 Solyc10g084420.2 1 45 40 33 157 104 86 63 43 17 78 89 5 19 24 transmembrane protein (AHRD V3.3 --* AT2G37300.6) AT2G37300 Solyc10g084430.2 136 120 8 211 201 136 162 133 84 122 0 6 34 0 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1Q288_ARTAN) AT5G02750 Solyc10g084440.3 240 164 85 109 83 114 96 67 84 99 34 90 121 75 109 Dirigent protein 17 (AHRD V3.3 *** A0A2G3BG42_CAPCH) Solyc10g084500.1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 Valine-tRNA ligase (AHRD V3.3 *** A0A1P8BDZ7_ARATH) AT3G53490 Solyc10g084510.1 29 56 51 49 42 52 66 63 36 29 29 33 44 45 44 hypothetical protein (AHRD V3.3 *** AT5G02640.1) Solyc10g084520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g084530.1 1007 2042 1146 1434 2103 1180 1179 2524 1483 2157 879 2104 1618 1369 1044 Lung seven transmembrane receptor family protein (AHRD V3.3 *-* A0A2U1P555_ARTAN) Solyc10g084535.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc10g084540.3 41 40 55 29 10 33 29 41 26 32 34 37 46 39 34 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200R560_9MAGN) AT3G09560 Solyc10g084550.3 0 0 10 0 0 0 1 0 0 0 0 0 0 0 0 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2G2YMS9_CAPAN) Solyc10g084560.3 0 1 8 3 4 2 3 5 15 1 3 4 0 2 0 Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC) Solyc10g087010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc10g087015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc10g087030.1 30 22 81 38 4 7 1 1 54 57 216 75 24 35 35 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc10g087035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc10g084590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc10g084600.2 3 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Plant protein 1589 of Uncharacterized protein function (AHRD V3.3 *-* A0A061EZD3_THECC) Solyc10g084605.1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) Solyc10g084610.3 113 275 250 151 143 186 149 168 187 108 159 186 386 362 267 60S ribosomal protein L23a (AHRD V3.3 *-* A0A2G3BF61_CAPCH) AT2G39460 Solyc10g084620.3 276 471 365 357 410 332 293 392 329 450 176 440 577 561 357 hypothetical protein (AHRD V3.3 *** AT3G53630.2) AT3G53630 Solyc10g084630.2 101 272 260 145 259 180 198 197 188 119 176 174 320 246 260 RNA binding protein (AHRD V3.3 *** B6U487_MAIZE) AT2G37510 Solyc10g084640.1 13571 8417 5503 11253 9668 6934 7969 10479 6453 13877 7371 10260 6778 9076 8003 N-acetyltransferase (AHRD V3.3 *** B6T916_MAIZE) AT2G39020 Solyc10g084650.3 1627 1215 1079 1233 940 1176 1109 999 991 1014 731 830 1183 1332 1227 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein (AHRD V3.3 *** F4IQY0_ARATH) AT2G37520 Solyc10g084660.2 61 72 122 83 130 138 125 101 73 44 92 58 129 88 184 Actin-depolymerizing factor (AHRD V3.3 *** D9I9X9_HEVBR) AT5G59890 Solyc10g084670.3 124 656 703 641 771 955 890 895 753 398 582 673 641 904 636 Eukaryotic translation initiation factor 3 subunit A (AHRD V3.3 *** A0A2G2VY82_CAPBA) AT4G11420 Solyc10g084680.1 42 29 41 64 25 47 33 41 41 50 48 43 37 64 36 molybdate transporter 1-like (AHRD V3.3 *** A0A2G2Y2Q5_CAPAN) AT2G25680 Solyc10g084690.2 57 224 164 223 365 390 390 353 253 108 203 214 194 166 183 ADP-ribosylation factor GTPase-activating protein 1 (AHRD V3.3 *** A0A1U8EA26_CAPAN) AT3G53710 Solyc10g084700.2 536 886 654 625 714 755 701 649 592 527 610 608 1080 842 668 Ribosomal protein S18 (AHRD V3.3 *** A0A2U1MXV3_ARTAN) AT1G07210 Solyc10g084710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g084720.1 20 6 5 4 8 2 4 0 5 9 15 5 4 4 7 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein (AHRD V3.3 *** A0A2U1MC19_ARTAN) Solyc10g084730.2 7 3 32 5 11 13 9 14 10 8 7 0 3 9 0 Unknown protein Solyc10g084740.3 844 492 549 462 248 452 495 304 353 266 605 416 434 529 862 rRNA-processing PIN domain protein (AHRD V3.3 *** A0A2K3MY48_TRIPR) Solyc10g084750.1 0 0 0 0 1 0 0 0 0 0 0 2 0 1 0 TRM32-like protein (DUF3741) (AHRD V3.3 *** AT5G02390.3) AT5G02390 Solyc10g084760.3 3145 2340 3129 4272 2712 3112 3174 2348 2426 2811 3607 2548 2517 3049 3993 E3 ubiquitin-protein ligase ubr3-like protein (AHRD V3.3 *** A0A2K3NLG7_TRIPR) AT5G02310 Solyc10g084770.3 1397 1211 1599 1187 982 865 807 905 1154 1102 1298 1139 1203 1336 1083 Protein kinase APK1B, chloroplastic (AHRD V3.3 *** A0A1U8E7T5_CAPAN) AT5G02290 Solyc10g084780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Expansin (AHRD V3.3 *** K4D3R2_SOLLC) Solyc10g084790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g084800.2 828 1214 1095 997 993 1019 962 1250 1405 1140 1063 1000 1447 1245 916 Oxysterol-binding protein (AHRD V3.3 *** Q6ST25_SOLTU) AT5G02100 Solyc10g084810.3 59 86 114 179 197 178 153 100 91 85 162 111 99 143 221 Membrane protein insertion efficiency factor (AHRD V3.3 *** A0A2U1NUS4_ARTAN) Solyc10g084820.2 713 456 540 478 512 501 522 480 375 507 536 545 409 391 377 S-acyltransferase (AHRD V3.3 *** A0A2G2VUU4_CAPBA) AT3G09320 Solyc10g084830.2 195 437 170 212 260 259 256 325 158 138 129 222 332 318 116 Amino acid transporter (AHRD V3.3 *** S8DQ51_9LAMI) AT5G02180 Solyc10g084840.2 83 147 185 103 98 108 138 95 78 122 97 51 137 118 74 Thaumatin-like protein (AHRD V3.3 *** A0A2G2VUW4_CAPBA) AT5G02140 Solyc10g084850.2 430 358 355 329 313 319 325 269 312 354 287 303 426 342 316 Vacuolar import/degradation protein Vid24 (AHRD V3.3 *** A0A2U1N9Z6_ARTAN) AT2G37680 Solyc10g084860.1 54 21 30 23 3 0 4 3 17 20 33 0 45 27 33 Lectin receptor kinase (AHRD V3.3 *** E7CWB5_WHEAT) Solyc10g084880.3 276 120 246 15 25 9 11 2 11 17 55 23 38 119 404 Avr9/Cf-9 rapidly elicited protein 137 (AHRD V3.3 *** Q9FQZ2_TOBAC) Solyc10g084890.3 45 11 47 57 14 8 7 3 45 71 173 69 24 35 34 UDP-glycosyltransferase 76E1 (AHRD V3.3 *** U76E1_SOLLC) Solyc10g084900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycerol-3-phosphate acyltransferase (AHRD V3.3 *** A0A0M4FCN7_9SOLA) Solyc10g084910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcriptional regulator TAC1 (AHRD V3.3 *** A0A2G2XZB0_CAPAN) AT3G53820 Solyc10g084920.2 351 491 418 442 555 480 499 638 451 542 301 571 497 483 351 PRA1 family protein (AHRD V3.3 *** A0A1U8E9Z1_CAPAN) AT5G02040 Solyc10g084930.2 447 314 302 339 261 250 280 274 330 435 299 241 388 351 405 Serine/threonine-protein kinase (AHRD V3.3 *** A0A0K0XQY3_TOBAC) AT2G37840 Solyc10g084940.3 74 293 236 131 185 188 215 185 415 503 266 299 466 261 236 Protein NRT1/ PTR FAMILY 5.7 (AHRD V3.3 *** A0A2G2YM72_CAPAN) AT3G53960 Solyc10g084950.3 16 66 33 65 2 4 5 0 57 33 9 16 44 23 78 Protein NRT1/ PTR FAMILY 5.7 (AHRD V3.3 *** A0A2G2VUL0_CAPBA) Solyc10g084960.2 292 75 167 32 1 0 0 0 27 68 83 3 136 118 62 Glutathione S-transferase (AHRD V3.3 *** C0LF68_CAPAN) AT3G09270 Solyc10g084970.2 8691 3203 1650 1729 1365 1453 1363 1410 1663 2323 1195 1860 1338 1747 1367 TIP41-like protein (AHRD V3.3 *-* Q84JE0_ARATH) AT3G54000 Solyc10g084980.3 2 34 26 36 11 30 36 13 9 23 32 8 13 18 14 Copper transporter (AHRD V3.3 *-* E9LK39_VITVI) Solyc10g084990.2 26 56 63 94 209 210 202 202 99 31 61 54 26 62 48 Phosphatidylinositol:ceramide inositolphosphotransferase (AHRD V3.3 *-* A0A2G3BFT1_CAPCH) AT3G54020 Solyc10g085000.2 254 365 374 270 376 372 359 398 585 309 228 312 286 365 220 Protein kinase domain (AHRD V3.3 *** A0A200R4T5_9MAGN) AT5G59010 Solyc10g085010.3 831 241 225 100 21 27 13 10 68 139 161 12 415 670 244 PAR1-like protein (AHRD V3.3 *** A0A2U1KIG3_ARTAN) AT3G54040 Solyc10g085020.3 3009 13106 10325 9889 18705 17796 16123 21327 9845 5911 9287 13143 7407 8777 4961 Tubulin beta chain (AHRD V3.3 *** A0A1U8EHY4_CAPAN) AT5G23860 Solyc10g085030.1 537 421 302 179 204 149 132 149 209 224 136 155 378 152 181 Heme-binding-like protein (AHRD V3.3 *** A0A2I0X8X3_9ASPA) AT2G37970 Solyc10g085040.1 695 517 165 272 505 368 307 433 436 386 154 347 471 193 210 Heme-binding-like protein (AHRD V3.3 *** A0A2I0X8X3_9ASPA) AT2G37970 Solyc10g085050.3 3 18 17 49 60 40 42 49 33 3 39 38 11 9 5 GDP-fucose O-fucosyltransferase-like protein (AHRD V3.3 *** G7JS84_MEDTR) AT2G37980 Solyc10g085060.3 671 628 757 656 668 765 757 671 727 685 720 708 723 854 791 Protein DEFECTIVE IN EXINE FORMATION 1 (AHRD V3.3 *** A0A2G2VUC7_CAPBA) Solyc10g085070.3 1405 2206 2295 2501 3094 2635 2422 3376 2859 2075 1814 2750 1917 2323 2126 UPF0503 protein, chloroplastic (AHRD V3.3 *** A0A1J3F8G8_NOCCA) AT3G09070 Solyc10g085080.3 39 95 103 103 86 88 67 81 76 63 78 49 58 82 161 8-amino-7-oxononanoate synthase (AHRD V3.3 *** AT3G09050.1) AT3G09050 Solyc10g085090.3 3 4 25 5 0 0 0 5 9 7 22 0 1 4 35 Laccase (AHRD V3.3 *** K4D3U3_SOLLC) AT2G38080 Solyc10g085100.2 551 696 670 750 877 848 854 833 925 741 601 780 607 825 714 Sulfoquinovosyl transferase SQD2 (AHRD V3.3 *** A0A2G2YM20_CAPAN) AT5G01220 Solyc10g085110.3 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *** G7KRB1_MEDTR) Solyc10g085120.3 14 39 11 34 4 11 7 11 18 9 6 9 22 14 97 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *** G7KRB1_MEDTR) Solyc10g085130.2 87 37 48 40 0 4 7 1 17 33 32 8 53 36 28 RING/U-box superfamily protein (AHRD V3.3 *** F4JAD0_ARATH) AT5G01520 Solyc10g085140.2 83 62 33 21 15 20 9 12 22 45 25 32 44 51 35 Alkyl transferase (AHRD V3.3 *** K7X479_SOLLC) AT5G58770 Solyc10g085150.2 214 202 255 261 213 244 200 169 197 238 255 149 215 238 267 Alkyl transferase (AHRD V3.3 *** K4D3U9_SOLLC) AT5G58770 Solyc10g085160.2 716 732 1190 1027 757 836 947 582 621 629 994 838 873 933 1027 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** B3H734_ARATH) AT5G01470 Solyc10g085170.3 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2YM07_CAPAN) Solyc10g085180.2 278 305 354 260 258 319 266 266 245 228 333 259 307 280 230 PHD finger protein ALFIN-LIKE 1 (AHRD V3.3 *** A0A1U8E9Y3_CAPAN) AT5G05610 Solyc10g085190.2 65 69 34 21 87 58 50 53 536 2105 1654 266 130 52 97 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4J670_ARATH) Solyc10g085200.2 779 758 650 616 787 765 651 731 1147 1280 627 1019 607 526 574 Acyl-CoA oxidase/dehydrogenase (AHRD V3.3 *** A0A200PWV2_9MAGN) AT3G51840 Solyc10g085205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc10g085210.2 32 3 6 5 0 0 3 0 7 8 3 2 4 4 4 Transcription factor (AHRD V3.3 *** A0A2U1NHT6_ARTAN) AT1G09950 Solyc10g085215.1 1324 910 1785 1305 1114 1167 1067 797 761 1094 1616 1123 896 1066 1790 UvrABC system C protein (AHRD V3.3 *** AT5G01350.1) AT5G01350 Solyc10g085220.3 352 1434 1026 1311 1347 1170 1171 1428 2900 1850 1810 3278 1470 1777 1259 Heparanase-like protein 3 (AHRD V3.3 *** A0A1U8EH62_CAPAN) Solyc10g085230.2 0 0 0 4 0 2 0 0 1 0 0 1 0 0 13 ripening-related mRNA 1b Solyc10g085240.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 UDP-glycosyltransferase 76E1 (AHRD V3.3 *** U76E1_SOLLC) Solyc10g085250.2 4 1 0 2 7 2 1 1 9 13 2 10 6 8 16 Unknown protein Solyc10g085260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UDP-glycosyltransferase 76E1 (AHRD V3.3 *-* U76E1_SOLLC) Solyc10g085280.1 22 147 58 112 272 206 232 261 204 180 185 342 68 120 34 UDP-glycosyltransferase 76E1 (AHRD V3.3 *** U76E1_SOLLC) Solyc10g085290.3 3997 4588 4306 4039 4079 4171 4407 3549 3462 3568 4742 3968 5126 4300 4211 BAG family molecular chaperone regulator 4 (AHRD V3.3 *** A0A2I0X8N7_9ASPA) AT3G51780 Solyc10g085300.2 700 398 384 255 286 242 233 253 390 529 390 314 499 350 350 hypothetical protein (Protein of unknown function%2C DUF538) (AHRD V3.3 *** AT3G08890.2) AT3G08890 Solyc10g085310.1 62 109 51 104 80 51 89 97 165 99 53 63 105 77 70 Abscisic acid receptor PYL5 (AHRD V3.3 *** A0A1U8EIS0_CAPAN) AT2G38310 Solyc10g085320.2 620 548 882 589 658 564 623 592 659 851 780 629 889 638 466 Protein trichome birefringence-like 35 (AHRD V3.3 *** A0A2G2YM14_CAPAN) AT5G01620 Solyc10g085330.2 64 114 51 76 99 97 123 118 144 111 96 125 65 60 86 Protein DETOXIFICATION (AHRD V3.3 *-* A0A200QBR8_9MAGN) Solyc10g085340.1 148 224 242 427 212 340 371 205 282 248 245 260 182 284 349 Protein DETOXIFICATION (AHRD V3.3 *** A0A328E6G5_9ASTE) Solyc10g085350.2 23 21 7 22 0 0 2 0 53 45 65 9 26 11 9 macrophage migration inhibitory factor homolog (AHRD V3.3 *** A0A2I4H5E2_9ROSI) Solyc10g085360.3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-fructofuranosidase, insoluble isoenzyme 1 (AHRD V3.3 *** A0A2G3BFL0_CAPCH) AT3G52600 Solyc10g085370.3 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1PMG8_ARTAN) AT5G01700 Solyc10g085380.2 1 4 35 7 5 11 10 6 39 8 11 3 7 7 5 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PL19_ARTAN),Pfam:PF13561 AT3G51680 Solyc10g085400.3 683 419 483 492 323 295 339 346 454 461 411 517 395 464 502 D-alanine--D-alanine ligase (AHRD V3.3 *** A0A200QQE9_9MAGN) AT3G08840 Solyc10g085410.3 1006 1061 1340 879 1041 1129 957 1013 1079 699 1141 778 1313 1196 1183 Cactin (AHRD V3.3 *** A0A2G3BFE1_CAPCH) AT1G03910 Solyc10g085420.3 560 281 730 190 45 20 29 47 116 524 995 155 205 185 209 Protein LURP-one-related 15 (AHRD V3.3 *** A0A2G2VU46_CAPBA) AT5G01750 Solyc10g085430.3 1623 1001 1178 987 983 778 839 939 1251 1619 1138 1089 1034 933 1128 Saposin B (AHRD V3.3 *** A0A2U1NDA3_ARTAN) AT3G51730 Solyc10g085440.1 108 66 165 90 104 117 110 85 125 85 166 96 131 112 147 Non-specific serine/threonine protein kinase (AHRD V3.3 *-* G4XMX4_SOLLC) Solyc10g085450.3 446 345 465 316 447 346 350 359 465 389 410 386 561 423 521 Non-specific serine/threonine protein kinase (AHRD V3.3 *** G4XMX4_SOLLC) Solyc10g085460.3 3366 2040 1820 2035 1568 1621 1879 1384 1990 2329 1953 1654 1692 1596 1522 NBS-LRR resistance protein (AHRD V3.3 *** A0A2K3NVA3_TRIPR) Solyc10g085470.1 112 74 170 96 63 71 98 46 63 148 131 49 173 43 46 Unknown protein Solyc10g085480.2 2949 6430 6632 5508 7661 7567 7208 6799 4860 3558 5659 5160 7814 6661 6452 60S ribosomal protein L24 (AHRD V3.3 *** A0A2G2VU23_CAPBA) AT3G53020 Solyc10g085490.3 644 266 406 368 326 270 322 285 279 366 417 259 316 368 355 F-box protein PP2-A15 (AHRD V3.3 *** A0A2G3BFE3_CAPCH) AT3G53000 Solyc10g085500.2 24 9 2 25 4 28 12 6 19 12 22 0 15 11 27 Cytochrome P450 (AHRD V3.3 *** A0A2U1LHU2_ARTAN) Solyc10g085510.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *-* Q9LWA3_SOLLC) Solyc10g085520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *-* Q9LWA4_SOLLC),Pfam:PF17766 AT5G59110 Solyc10g085530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc10g085540.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) Solyc10g085550.3 139 1633 1251 1267 2444 2107 2323 2463 1350 656 875 1323 1245 1633 863 Enolase (AHRD V3.3 *** A0A200Q2G1_9MAGN) AT2G36530 Solyc10g085560.3 977 1166 828 647 923 784 802 943 767 576 655 749 1314 1150 775 Histone deacetylase HDT1 (AHRD V3.3 *** A0A2G3BFH9_CAPCH) Solyc10g085570.3 576 392 514 543 414 422 437 396 445 520 676 460 424 521 699 CTR1-like protein kinase-4 AT5G03730 Solyc10g085580.3 575 635 401 335 350 283 302 387 466 328 312 396 747 701 570 Embryo sac development arrest 7 (AHRD V3.3 *** A0A2U1PPL1_ARTAN) AT3G56990 Solyc10g085590.1 1079 915 837 610 627 532 482 680 574 809 2388 825 696 714 1351 Protein ELC (AHRD V3.3 *** A0A2G3BFL9_CAPCH) AT3G12400 Solyc10g085600.2 482 502 417 545 452 497 514 450 495 392 349 421 491 525 585 BTB/POZ domain-containing protein FBL11 (AHRD V3.3 *** A0A2U1NTM0_ARTAN) AT2G36370 Solyc10g085610.2 122 76 140 188 35 37 60 21 82 118 136 143 94 147 337 Calmodulin-binding family protein, putative, expressed (AHRD V3.3 *** Q2QXN6_ORYSJ) AT3G52870 Solyc10g085620.2 292 141 264 317 112 88 67 81 144 122 351 87 178 224 511 Myb family transcription factor APL (AHRD V3.3 *** A0A1U8E9S3_CAPAN) AT5G18240 Solyc10g085630.3 540 742 599 591 613 620 554 584 495 418 491 568 703 786 543 3-hydroxyisobutyryl-CoA hydrolase-like protein mitochondrial-like (AHRD V3.3 *** A0A2K3NNR6_TRIPR) AT4G31810 Solyc10g085640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Beta-fructofuranosidase, insoluble isoenzyme CWINV2 (AHRD V3.3 *** A0A2G2YLQ5_CAPAN) AT3G52600 Solyc10g085650.2 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 Beta-fructofuranosidase, insoluble isoenzyme CWINV2 (AHRD V3.3 *** A0A2G2YLQ5_CAPAN) AT3G52600 Solyc10g085660.3 1314 501 371 427 228 331 306 208 328 588 454 379 355 403 559 F-box protein SKIP24 (AHRD V3.3 *** A0A2G2YLS2_CAPAN) AT1G08710 Solyc10g150150.1 0 0 0 0 0 1 2 1 0 0 0 1 0 0 1 Secoisolariciresinol dehydrogenase (AHRD V3.3 *-* A0A2G3AMS0_CAPAN) Solyc10g085670.2 16 121 117 130 77 103 100 93 106 106 87 42 71 81 209 MAP kinase kinase kinase 79 AT1G79620 Solyc10g085680.2 899 803 622 901 1038 969 954 976 723 885 599 740 616 659 565 Serine/threonine-protein kinase STN8, chloroplastic (AHRD V3.3 *** A0A2G2VU68_CAPBA) AT5G01920 Solyc10g085690.2 431 278 292 328 321 272 274 268 339 379 326 300 276 273 284 hypothetical protein (AHRD V3.3 *-* AT2G38570.1) AT2G38570 Solyc10g085700.1 0 2 0 2 0 0 0 0 1 0 0 0 2 0 3 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A118K705_CYNCS) Solyc10g085710.3 1252 1074 881 839 839 823 825 818 921 990 795 868 985 1050 1123 MACPF domain-containing protein (AHRD V3.3 *** A0A1Q3CAN4_CEPFO) Solyc10g085720.2 768 357 751 376 370 279 310 240 329 526 496 283 419 449 562 SRSF protein kinase 1 (AHRD V3.3 *** A0A2G2VXX7_CAPBA) Solyc10g085730.3 3 0 0 0 0 0 0 0 0 2 0 1 0 0 0 Exostosin family protein (AHRD V3.3 *** A0A2U1KQ90_ARTAN) AT5G03795 Solyc10g085740.2 61 71 89 96 26 87 36 84 40 94 26 176 26 114 55 GDSL esterase/lipase (AHRD V3.3 *** A0A1U8EIK3_CAPAN) AT5G03820 Solyc10g085750.2 10 89 65 115 178 101 109 164 158 161 87 160 168 132 68 Polyadenylate-binding protein (AHRD V3.3 *** A0A2G3BFC7_CAPCH) AT2G36660 Solyc10g085760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A072VBY9_MEDTR) Solyc10g085770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic aspartyl protease family protein (AHRD V3.3 *-* Q0WRU5_ARATH) Solyc10g085780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-LRR resistance protein (AHRD V3.3 *-* A0A2K3NYK0_TRIPR) Solyc10g085790.2 1331 1448 1231 1182 1223 1260 1079 1328 1418 1168 1066 1116 1483 1262 1254 RNA helicase DEAD34 AT3G53110 Solyc10g085800.2 10 28 100 57 18 30 17 29 23 35 62 27 36 44 176 PLATZ transcription factor family protein (AHRD V3.3 *** F4IHN4_ARATH) AT2G27930 Solyc10g085810.2 277 307 595 341 265 274 270 292 384 489 404 291 420 323 421 Vacuolar protein-sorting-associated protein 37-like protein 2 (AHRD V3.3 *** A0A2G2VU17_CAPBA) AT3G53120 Solyc10g085820.2 509 258 132 149 83 166 135 85 175 273 200 166 232 147 224 dnaJ homolog subfamily C member 28 (AHRD V3.3 *** A0A2I4E0W0_9ROSI) Solyc10g085830.2 283 386 171 350 194 205 152 242 346 440 159 234 455 180 95 O-methyltransferase, putative (AHRD V3.3 *** B9S0A7_RICCO) AT3G53140 Solyc10g085840.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Caffeic acid 3-O-methyltransferase-like protein (AHRD V3.3 *-* A0A2K3L783_TRIPR) Solyc10g085850.1 170 165 625 350 1602 3828 2323 1528 334 327 537 435 243 309 423 TPSI1 protein (AHRD V3.3 *** Q41336_SOLLC) Solyc10g085860.1 1 1 2 5 0 3 2 5 3 0 0 1 6 7 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4H3C3_9ROSI) AT3G53150 Solyc10g085870.1 16 62 13 36 45 24 21 30 31 96 1 22 216 22 5 Glycosyltransferase (AHRD V3.3 *** A0A328CX74_9ASTE) AT2G36750 Solyc10g085880.1 91 70 6 5 0 4 0 2 6 65 2 0 132 18 6 UDP-glycosyltransferase 73C4 (AHRD V3.3 *** U73C4_SOLLC) Solyc10g085890.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc10g085895.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc10g085900.3 312 378 219 293 285 206 190 251 233 241 182 332 478 477 213 Protein SLOW GREEN 1, chloroplastic (AHRD V3.3 *** A0A1J3J1U9_NOCCA) Solyc10g085910.2 495 755 682 885 884 850 836 915 774 419 636 596 543 658 683 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* B6T8A4_MAIZE) AT2G37390 Solyc10g085920.3 300 546 468 723 344 314 245 337 985 525 556 865 295 458 463 UDP-glucuronic acid decarboxylase 1 (AHRD V3.3 *** A0A1J3FDM8_NOCCA) AT3G53520 Solyc10g085930.3 298 227 217 236 157 161 153 131 156 210 224 169 208 193 220 YCF20-like protein (DUF565) (AHRD V3.3 *** AT3G56830.8) AT3G56830 Solyc10g085940.1 8 0 3 0 0 0 0 1 10 3 20 1 0 4 0 membrane-associated kinase regulator (AHRD V3.3 *** AT2G37380.1) Solyc10g085950.2 112 74 87 93 362 272 304 237 60 70 94 137 154 82 107 ABC transporter protein (AHRD V3.3 *** A0A1L4BHU2_ORYSI) AT2G37330 Solyc10g085960.2 44 30 90 107 61 96 59 63 39 63 64 24 38 30 44 Pathogenesis-related protein 1 (AHRD V3.3 *** A0A2K3L121_TRIPR) Solyc10g085970.3 2431 1555 1433 1698 1128 1311 1422 1143 1646 1730 1528 1607 1235 1408 1359 Protein MODIFIER OF SNC1 11 (AHRD V3.3 *** A0A2G2YLK2_CAPAN) AT5G02770 Solyc10g085980.2 226 170 239 260 241 308 307 304 239 170 304 220 219 187 213 Integral membrane TerC family protein (AHRD V3.3 *** A0A1P8BDK4_ARATH) AT5G12130 Solyc10g085990.3 1036 798 1366 950 854 947 910 744 908 773 1327 835 1042 1000 1069 Serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2YLJ8_CAPAN) AT5G02800 Solyc10g086000.3 1597 1004 1661 1575 853 938 898 848 1391 1131 1742 1670 1147 2273 2021 Two-component response regulator-like APRR7 (AHRD V3.3 *** A0A1J3CWX7_NOCCA) Solyc10g086010.2 3251 8392 6105 4823 7443 7608 6702 7468 5588 4407 4877 6222 9595 7999 4954 60S ribosomal protein L4 (AHRD V3.3 *** A0A2G2VZK1_CAPBA) AT3G09630 Solyc10g086020.3 3195 4678 5251 3477 4109 4115 4095 3849 2899 2591 3429 3304 5039 4465 4638 Ribosomal protein S23 (AHRD V3.3 *** A8IJQ4_CHLRE) AT5G02960 Solyc10g086030.2 111 169 204 189 407 460 407 455 231 155 288 212 128 160 177 Interactor of constitutive active ROPs (AHRD V3.3 *** A0A2K3PRJ7_TRIPR) AT2G37080 Solyc10g086040.2 412 668 917 454 596 639 564 531 511 352 625 471 1208 870 658 Mitochondrial import inner membrane translocase subunit TIM14 (AHRD V3.3 *** A0A2G2YLL8_CAPAN) AT2G35795 Solyc10g086060.2 1317 2344 2721 2345 2221 2341 2441 2138 2659 2145 3681 2433 2014 2214 2453 SUN-like protein 30 AT5G03040 Solyc10g086065.1 244 656 791 508 634 978 699 770 707 493 713 617 802 886 721 DNA-binding protein S1FA (AHRD V3.3 --* XP_004246674.1) Solyc10g086070.2 518 665 660 528 481 488 456 488 476 475 509 504 654 684 672 WD40 repeat (AHRD V3.3 *** A0A200QIA1_9MAGN) AT3G53390 Solyc10g086080.2 0 0 5 1 2 3 6 18 4 1 0 0 3 3 0 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1PM96_ARTAN) AT3G09770 Solyc10g086090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive proteinase inhibitor 1 (AHRD V3.3 *** A0A2G2VU06_CAPBA) AT2G38870 Solyc10g086100.2 3 0 6 4 0 0 0 0 0 1 0 1 1 0 0 Proteinase inhibitor I-B (AHRD V3.3 *** A0A1U8EBY9_CAPAN) AT2G38870 Solyc10g086110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Senescence regulator (AHRD V3.3 *-* A0A2U1KXJ7_ARTAN) Solyc10g086120.2 442 452 562 469 633 642 577 512 372 369 501 466 558 533 452 CASP-like protein (AHRD V3.3 *** S8D9C8_9LAMI) Solyc10g150151.1 2 0 0 3 1 3 10 2 2 1 9 0 4 2 2 Unknown protein Solyc10g086130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin Response Factor 16B Solyc10g086137.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2YLM8_CAPAN) Solyc10g086150.2 1019 4177 2739 2508 2002 1662 2003 1799 2355 1538 1477 2400 3187 4232 2281 RNA-binding protein (AHRD V3.3 *** A0A2U1PI86_ARTAN) AT2G37220 Solyc10g086160.1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 Threonine dehydratase (AHRD V3.3 *** A0A2G2YMM3_CAPAN) Solyc10g086170.1 118 87 41 55 274 214 217 226 168 170 99 166 60 85 129 Amidase 1 (AHRD V3.3 *** A0A2G3BEL1_CAPCH) AT1G08980 Solyc10g086180.2 582 6959 2759 4406 9758 9442 9402 10931 7489 7843 2978 7775 3639 5198 2242 Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A2G2VU16_CAPBA) AT2G37040 Solyc10g086190.3 1151 6219 4323 4854 5809 4858 5818 6082 5279 4025 3472 4609 6505 5594 5405 Adenosine kinase (AHRD V3.3 *** A0A1U8FGB1_CAPAN) AT5G03300 Solyc10g086200.1 0 4 1 0 0 0 0 0 0 0 0 0 2 1 0 SAUR-like auxin-responsive protein family (AHRD V3.3 *** A0A2U1QCM8_ARTAN) AT2G37030 Solyc10g086210.2 373 602 547 480 505 514 575 496 420 428 459 592 682 604 475 translin-like (AHRD V3.3 *** A0A2I4FDW4_9ROSI) AT2G37020 Solyc10g086220.2 2031 2295 1773 2152 3943 3864 3747 3041 2840 2522 3097 1832 2177 1777 2943 12-oxophytodienoate reductase AT1G76690 Solyc10g086230.1 0 6 0 1 0 0 7 0 0 1 0 0 0 0 0 Unknown protein Solyc10g086240.2 310 626 444 738 1143 936 1105 1182 1618 836 951 585 818 578 873 Glycosyltransferase (AHRD V3.3 *** A0A1Q3DDP0_CEPFO) Solyc10g086250.2 173 224 148 194 113 98 153 123 470 133 164 233 327 243 199 R2R3MYB transcription factor 75 AT1G66370 Solyc10g086260.3 1 3 0 0 0 1 4 5 1 0 0 2 0 2 2 anthocyanin 1 AT1G66370 Solyc10g086270.2 4 7 4 3 33 48 44 41 6 4 3 5 6 2 2 R2R3MYB transcription factor 28 AT1G66370 Solyc10g086280.2 1533 617 2262 315 18 51 34 21 320 653 6659 739 634 617 891 heavy metal-associated isoprenylated plant protein 3-like (AHRD V3.3 *** A0A1S4A3L2_TOBAC) AT2G36950 Solyc10g086290.3 2 0 0 4 0 1 0 0 1 0 2 0 0 0 0 R2R3MYB transcription factor 114 AT1G66370 Solyc10g086300.1 0 0 2 4 0 4 9 0 1 0 4 4 1 4 0 Unknown protein Solyc10g086310.1 21 57 122 38 53 43 34 31 40 51 132 21 22 34 151 RAB GTPase (AHRD V3.3 *** A0A2U1PC99_ARTAN) AT5G03530 Solyc10g086320.2 1 7 6 26 17 26 20 30 63 17 13 21 2 14 16 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *** K4D464_SOLLC) AT3G09920 Solyc10g086330.2 697 1655 1613 1229 1467 1369 1454 1417 1205 695 1114 1153 2519 1890 1540 60S ribosomal protein L23a (AHRD V3.3 *-* A0A2G2YLF5_CAPAN) AT2G39460 Solyc10g086340.1 98 662 587 927 1530 1544 1636 1814 790 514 871 1054 164 433 387 Kinesin (AHRD V3.3 *** A0A200PZ85_9MAGN) AT2G37420 Solyc10g086350.2 3461 2336 2416 2138 1672 1771 1858 1545 1732 2408 2256 1923 2753 2317 2252 Rab family GTPase (AHRD V3.3 *** A0A1Y1I3W2_KLENI) AT3G46060 Solyc10g086360.2 1850 940 1104 1006 982 1026 982 995 1079 1367 1203 1227 843 968 998 hypothetical protein (AHRD V3.3 *-* AT3G53670.2) AT3G53670 Solyc10g086370.1 3 4 9 7 0 1 1 8 1 0 21 3 0 2 4 Transcription factor GRAS (AHRD V3.3 *** A0A200PU13_9MAGN) Solyc10g086380.1 75 24 24 41 0 1 0 0 23 9 14 1 41 50 84 Transcription factor GRAS (AHRD V3.3 *** A0A200PU13_9MAGN) Solyc10g086390.2 1 5 10 12 2 0 6 3 12 12 2 8 12 9 48 Short-chain dehydrogenase TIC 32, chloroplastic (AHRD V3.3 *** A0A1U8E748_CAPAN) AT5G02540 Solyc10g086400.2 9170 4903 3704 3755 3239 3187 2918 2803 3074 4045 3236 3543 4107 4063 3828 THO complex subunit 4B (AHRD V3.3 *** A0A2G3BF44_CAPCH) Solyc10g086410.3 8637 4789 2736 2458 2323 2066 1782 2251 2149 1772 2056 1763 3260 2952 3100 LEHSC270 hsc-2heat shock protein cognate 70 AT3G12580 Solyc10g086420.1 1819 1745 1842 2283 2132 2527 2406 2075 2025 1896 1990 1714 1692 1719 2435 FYD (AHRD V3.3 *** AT3G12570.4) AT2G37570 Solyc10g086430.3 56 66 33 112 14 12 18 3 31 44 51 28 71 92 129 WD40 repeat (AHRD V3.3 *** A0A200QES9_9MAGN) AT2G37670 Solyc10g086440.2 165 286 300 244 263 260 265 334 280 360 330 370 280 315 263 Dof zinc finger protein DOF3.6 (AHRD V3.3 *** A0A2G3BF96_CAPCH) AT5G02460 Solyc10g086450.1 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 cyclin-dependent protein kinase inhibitor SMR3 (AHRD V3.3 *** XP_004249686.1) Solyc10g086460.2 0 0 7 1 2 5 0 0 1 0 0 2 4 1 1 Actin (AHRD V3.3 *** A0A1U8E731_CAPAN) Solyc10g086470.2 86 95 66 107 86 108 78 76 67 75 97 71 89 77 77 hypothetical protein (AHRD V3.3 *-* AT1G78995.1) AT1G78995 Solyc10g086480.3 146 236 246 449 469 431 425 327 411 310 329 356 294 282 221 Pectin acetylesterase (AHRD V3.3 *** K4D480_SOLLC) AT3G09410 Solyc10g086490.2 0 3 0 0 0 8 0 3 4 3 4 0 0 1 0 Protein phosphatase 2C (AHRD V3.3 *-* A0A2U1P5P3_ARTAN) Solyc10g086500.1 140 1000 524 813 699 616 583 673 1365 1351 801 2321 608 724 168 steroid 5 alpha reductase DET2 AT2G38050 Solyc10g086510.2 432 705 797 508 651 513 561 429 472 352 537 444 963 823 695 Mitochondrial import inner membrane translocase subunit Tim9 (AHRD V3.3 *** A0A1U8HIB5_CAPAN) AT3G46560 Solyc10g086520.2 25 97 229 93 66 86 80 63 102 106 524 69 100 93 47 expansin 6 AT2G37640 Solyc10g086530.1 12 14 20 31 10 10 17 16 37 23 58 15 20 13 46 Transcription factor GRAS (AHRD V3.3 *** A0A200R547_9MAGN) AT2G37650 Solyc10g086535.1 4 6 37 33 9 8 9 4 18 6 69 24 13 4 37 Unknown protein Solyc10g086540.3 626 539 560 477 401 462 368 399 530 374 445 462 698 618 544 ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A317MD73_9BACT) Solyc10g086550.2 784 1090 993 858 1154 1050 1156 1263 1315 867 997 894 1502 1300 1145 ATP-dependent zinc metalloprotease FTSH 3, mitochondrial (AHRD V3.3 *** A0A2G2YLB4_CAPAN) AT1G07510 Solyc10g086560.3 1950 1183 2023 2178 2112 2321 2001 2016 1961 2478 2571 2050 1238 1315 1789 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE (AHRD V3.3 --* FHL_ARATH) AT5G02200 Solyc10g086565.2 357 237 196 246 345 329 346 341 233 389 245 286 121 204 188 S-acyltransferase (AHRD V3.3 *** A0A2G2VTM9_CAPBA) Solyc10g086570.3 602 132 175 77 256 272 286 195 162 610 233 182 20 39 135 transmembrane protein (AHRD V3.3 *** AT5G02160.1) AT5G02160 Solyc10g086575.1 5 0 0 0 0 0 0 0 0 1 0 0 1 0 0 Unknown protein Solyc10g086580.2 4293 6521 2059 3260 7320 5986 6191 7610 5365 4651 2097 3248 3523 1498 1703 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (AHRD V3.3 *** RCA_SOLPN) AT2G39730 Solyc10g086590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2K3LRA9_TRIPR) Solyc10g086600.3 2 0 2 25 0 0 0 0 5 4 0 2 2 0 4 Subtilisin-like protease-like protein (AHRD V3.3 *-* A0A2K3NVY8_TRIPR) Solyc10g086610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility protein S1 family (AHRD V3.3 *** A0A2U1P1N3_ARTAN) Solyc10g086620.2 42 41 39 52 2 9 9 16 28 41 8 36 94 37 33 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IKL5_ARATH),Pfam:PF13561 Solyc10g086630.2 9 11 9 8 13 5 5 5 5 9 8 2 4 1 0 Legume-specific protein (AHRD V3.3 *** A0A2R4NA24_9FABA) AT2G37750 Solyc10g086635.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc10g086640.3 209 210 384 512 142 162 179 109 318 456 494 363 530 362 480 BEL1-like homeodomain protein 9 (AHRD V3.3 *-* A0A2G2VXF9_CAPBA) Solyc10g086650.1 179 411 556 475 537 397 354 593 647 684 416 555 305 361 358 Glyoxal oxidase (AHRD V3.3 *** A0A200R4V9_9MAGN) AT3G53950 Solyc10g086660.2 148 521 898 878 1139 1182 1193 1045 1085 480 950 953 456 601 585 Rop guanine nucleotide exchange factor 7 (AHRD V3.3 *** A0A2G3BIR2_CAPCH) AT5G02010 Solyc10g086670.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** A0A2U1NYH2_ARTAN) AT3G53990 Solyc10g086680.1 15 32 240 35 0 0 2 0 11 76 141 29 12 20 21 18.2 kDa class I heat shock protein (AHRD V3.3 *** A0A2G2YKD7_CAPAN) Solyc10g086690.3 404 167 1271 147 53 91 78 93 71 325 749 192 156 216 72 Phosphatidylinositol:ceramide inositolphosphotransferase (AHRD V3.3 *-* A0A2G3BFT1_CAPCH) AT3G54020 Solyc10g086700.3 50 114 174 179 156 140 107 147 135 110 143 133 143 157 79 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1KT36_ARTAN) Solyc10g086710.3 33 40 225 72 85 61 77 59 37 69 104 15 41 56 90 PAR1 (AHRD V3.3 *** A0A200R4T9_9MAGN) AT3G54040 Solyc10g086720.2 20 6 0 4 0 0 0 0 1 0 0 1 2 0 0 Fructose-1,6-bisphosphatase (AHRD V3.3 *** B6TSK5_MAIZE) Solyc10g086730.2 1795 1748 719 1254 2022 2233 2197 1835 1375 1844 1002 1317 1213 538 862 Fructose-1,6-bisphosphatase (AHRD V3.3 *** B6TSK5_MAIZE) Solyc10g086740.3 2 50 35 36 66 63 46 84 46 22 29 49 17 39 13 Myosin-M heavy protein (AHRD V3.3 *-* Q5S4W1_ARATH) AT2G37960 Solyc10g086750.1 0 2 14 16 11 18 16 19 4 2 5 17 4 9 0 Myosin-M heavy protein (AHRD V3.3 *-* Q5XVA3_ARATH) Solyc10g086760.2 746 3437 1743 2248 3850 3087 3159 4112 2300 1667 1761 2706 2650 2625 1580 Tubulin beta chain (AHRD V3.3 *** A0A1U8EHY4_CAPAN) AT5G23860 Solyc10g086770.3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 13 ataxin-3 homolog (AHRD V3.3 *** A0A2I4G2S9_9ROSI) AT3G54130 Solyc10g086780.2 487 399 372 312 206 245 216 271 306 311 363 254 626 477 309 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q84K82_ARATH) AT5G20400 Solyc10g086783.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g086785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g086787.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc10g005000.4 44 92 235 332 242 246 179 160 60 18 87 50 48 70 111 SUN-like protein 27 Solyc10g005010.4 41 25 26 67 21 11 4 5 11 8 9 5 30 23 147 NAC domain-containing protein (AHRD V3.3 *** A0A2K3MP41_TRIPR) AT2G46770 Solyc10g005020.3 7 19 15 39 10 20 17 2 11 14 59 13 0 12 45 UvrABC system protein C (AHRD V3.3 *** A0A061DT80_THECC) AT3G61920 Solyc10g005030.4 2224 1373 195 911 849 875 866 889 660 1252 143 594 749 249 150 Two-component response regulator-like APRR5 (AHRD V3.3 *** A0A1U8EDA4_CAPAN) Solyc10g005040.4 245 115 237 285 91 83 112 51 100 266 299 72 182 184 252 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9C568_ARATH) AT4G01410 Solyc10g005050.3 872 1295 1527 1525 2540 2145 2390 2495 1899 2010 1757 2131 925 971 1067 Protein CURVATURE THYLAKOID 1B, chloroplastic (AHRD V3.3 *** A0A2G3BDB1_CAPCH) AT2G46820 Solyc10g005060.4 179 1107 693 649 1721 1329 1768 2116 1228 750 471 1210 836 818 725 O-methyltransferase-like protein (AHRD V3.3 *** D3JZ18_PRUMU) Solyc10g005080.3 9839 10038 546 6367 17150 14066 13259 19225 3539 6638 447 2015 5021 829 576 Late elongated hypocotyl (AHRD V3.3 *** J9PV71_NICAT) AT1G01060 Solyc10g005090.3 47 38 52 72 41 51 69 56 65 45 46 66 79 50 34 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q5S8_9MAGN) AT5G08490 Solyc10g005100.3 558 190 100 104 19 6 17 33 56 46 82 39 146 120 377 Plasma membrane-associated cation-binding protein 1 (AHRD V3.3 *** A0A2G2YJZ6_CAPAN) AT4G20260 Solyc10g005110.3 1096 1357 863 1005 1331 1207 1373 1535 1392 1241 876 1093 1092 1163 1326 Oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic (AHRD V3.3 *** A0A1U8EMR2_CAPAN) AT1G03475 Solyc10g005120.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4JLS2_ARATH) AT4G16330 Solyc10g005125.1 436 297 246 213 231 265 228 312 308 260 203 227 187 257 364 Endoribonuclease Dicer-like protein 1 (AHRD V3.3 *** A0A2G2YJZ3_CAPAN) AT1G01040 Solyc11g004000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g004005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g005000.2 484 648 878 752 695 917 827 589 502 467 797 621 848 800 1010 keratinocyte-associated-like protein (AHRD V3.3 *** AT1G77350.2) AT1G77350 Solyc11g005010.3 728 919 820 817 947 1025 923 1021 1004 769 852 733 859 841 689 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1MB54_ARTAN) AT2G30710 Solyc11g005020.3 1971 1468 1458 1728 1364 1560 1738 1402 1389 1135 1412 1174 998 1482 1691 Protein translocase subunit SecA (AHRD V3.3 *** A0A1J7H8J9_LUPAN) AT1G21650 Solyc11g005030.3 1038 907 684 762 635 666 736 765 612 942 504 721 580 871 684 Protein translocase subunit SecA (AHRD V3.3 *** A0A200Q5C1_9MAGN) AT1G21651 Solyc11g005050.2 737 1334 1797 1714 1557 2104 2059 1415 955 1040 1752 1065 1390 1398 2017 Mitochondrial ATP synthase subunit (AHRD V3.3 *** A0A2K3PHV4_TRIPR) AT5G59613 Solyc11g005060.2 363 312 349 319 273 357 320 276 271 224 294 273 317 449 600 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (AHRD V3.3 *** A0A2U1L3K2_ARTAN) AT1G72420 Solyc11g005070.2 116 89 156 108 97 69 58 87 78 107 113 122 70 107 93 amino acid transporter 3 AT1G77380 Solyc11g005080.1 1584 851 591 698 645 402 376 693 916 1382 578 831 675 748 1145 Protein TolB (AHRD V3.3 *** A0A1J3FFV4_NOCCA) AT1G21680 Solyc11g005090.2 285 1453 1168 1942 3216 3158 3341 3458 1579 1237 1331 2422 360 1032 923 cyclin A1 AT1G44110 Solyc11g005100.3 0 8 11 18 7 9 15 13 6 3 9 10 3 0 0 NAD kinase (AHRD V3.3 *-* A0A1Y1I8F5_KLENI) AT1G21640 Solyc11g005110.3 971 874 763 879 671 809 888 812 842 733 833 828 907 894 824 Polyglutamine-binding protein 1 (AHRD V3.3 *** A0A1U8GEZ8_CAPAN) AT2G41020 Solyc11g005120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS box transcription factor (AHRD V3.3 *** Q8L5F7_DAUCA) AT5G23260 Solyc11g005130.2 1467 1483 1633 1106 1121 1365 1112 1319 1317 1092 1079 1193 1717 1547 1499 Wound-responsive family protein (AHRD V3.3 *** A0A2U1Q4D9_ARTAN) AT1G21610 Solyc11g005140.1 301 710 500 415 656 551 515 558 502 270 386 518 782 649 459 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QJH1_9MAGN) AT3G02650 Solyc11g005150.3 971 5641 5615 21881 10440 9727 21178 15980 4492 8925 7709 7198 2119 4098 1629 entensin X55687 Solyc11g005160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *** A0A200QZT1_9MAGN) Solyc11g005170.2 9446 7136 10738 6979 6219 7972 7753 5910 7333 4719 10437 6169 6892 8303 14046 RNA-binding protein 39-like (AHRD V3.3 *** A0A2I4GQQ7_9ROSI) AT5G09880 Solyc11g005180.1 10 9 37 14 24 37 13 18 24 24 5 44 7 17 25 Protein SENSITIVITY TO RED LIGHT REDUCED 1 (AHRD V3.3 *-* A0A1U8FAA0_CAPAN) Solyc11g005190.3 301 202 49 83 150 196 180 116 95 137 17 90 54 36 60 WD40 repeat (AHRD V3.3 *** A0A200QUE5_9MAGN) AT5G23730 Solyc11g005200.2 205 176 196 167 127 158 170 188 233 174 144 216 198 238 330 Prolyl 4-hydroxylase 1 (AHRD V3.3 *** A0A2G3B1Y9_CAPCH) AT2G43080 Solyc11g005210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 --* A0A2K3MPF2_TRIPR) Solyc11g005220.2 867 944 1135 1093 1272 1280 1203 1023 921 835 977 842 1015 942 1132 AP complex subunit sigma (AHRD V3.3 *** A0A2G2Y783_CAPAN) AT4G35410 Solyc11g005230.1 0 1 37 1 6 10 8 13 6 6 9 18 1 11 8 Protein SENSITIVITY TO RED LIGHT REDUCED 1 (AHRD V3.3 *** A0A1J3HM31_NOCCA) Solyc11g005240.1 0 2 72 6 9 8 6 9 7 19 74 14 3 1 0 protein SENSITIVITY TO RED LIGHT REDUCED 1-like (AHRD V3.3 *-* A0A2I4GZX1_9ROSI) Solyc11g005250.3 2548 2327 2143 2210 1951 2301 2311 2230 2240 2651 1879 2366 1920 2311 1621 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein (AHRD V3.3 *** A0A1I9LN96_ARATH) AT3G54460 Solyc11g005260.2 151 176 167 138 190 160 180 218 175 104 105 172 236 139 189 Protein SENSITIVITY TO RED LIGHT REDUCED 1 (AHRD V3.3 *** A0A1U8FAA0_CAPAN) AT5G59560 Solyc11g005270.1 11 6 4 4 1 7 0 2 5 5 15 4 9 3 15 Glutaredoxin (AHRD V3.3 *** A0A2U1PQX2_ARTAN) Solyc11g005280.1 158 52 117 70 27 13 12 9 19 81 42 15 37 58 202 RING-H2 finger protein ATL78 (AHRD V3.3 *** A0A2G3B1W2_CAPCH) AT1G49230 Solyc11g005290.1 5 3 10 34 0 1 4 0 9 5 11 0 9 5 26 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1KVX7_ARTAN) AT1G49230 Solyc11g005300.2 105 31 9 78 36 42 15 28 121 74 85 55 44 125 460 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QK74_ARTAN) AT1G49230 Solyc11g005310.1 391 124 11 222 67 54 26 48 200 389 193 156 56 304 1149 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QK74_ARTAN) AT1G49230 Solyc11g005320.1 0 8 1 3 4 8 1 2 0 1 5 1 5 0 29 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QK74_ARTAN) AT1G49230 Solyc11g005330.2 11060 12307 10120 10445 11292 11884 11623 12293 9059 9163 8808 9913 9535 9708 9691 Solyc11g005330 AT5G09810 Solyc11g005340.3 34 76 45 117 102 87 90 78 97 35 128 117 44 84 102 Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** F4KFC4_ARATH) AT5G09820 Solyc11g005350.2 126 119 394 327 77 98 82 59 83 144 359 24 61 203 405 WAT1-related protein (AHRD V3.3 *** K4D4E8_SOLLC) AT1G25270 Solyc11g005360.2 665 567 920 720 635 707 695 565 591 515 767 591 1114 835 898 BolA protein (AHRD V3.3 *** A0A2U1MMC0_ARTAN) AT5G09830 Solyc11g005370.2 600 978 785 697 1263 1111 938 1001 755 697 687 766 1284 1248 724 U6 snRNA-associated Sm-like protein LSm3 (AHRD V3.3 *** A0A1U8F721_CAPAN) AT1G21190 Solyc11g005380.2 979 431 1000 528 367 379 368 309 580 445 1160 415 533 655 1227 Trihelix transcription factor GTL1 (AHRD V3.3 *** A0A2G2VFX7_CAPBA) Solyc11g005390.3 22 85 84 73 154 146 160 124 81 42 77 98 26 58 35 transmembrane protein (AHRD V3.3 *** AT3G18800.1) AT3G18800 Solyc11g005400.2 229 299 254 207 213 260 237 244 209 163 174 212 369 313 271 DnaJ domain (AHRD V3.3 *** A0A200QBK9_9MAGN) AT2G18465 Solyc11g005410.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WAT1-related protein (AHRD V3.3 *** K4D4F4_SOLLC) Solyc11g005420.3 189 448 443 259 607 605 650 684 499 180 443 449 361 335 216 Unknown protein Solyc11g005430.2 2 0 0 0 0 2 1 0 2 4 0 0 3 0 0 WAT1-related protein (AHRD V3.3 *** K4D4F6_SOLLC) Solyc11g005440.2 205 376 265 180 167 141 113 160 243 119 209 202 491 436 265 Endonuclease or glycosyl hydrolase (AHRD V3.3 *** A0A2U1M909_ARTAN) AT5G09840 Solyc11g005450.3 5050 2317 3222 3212 1736 1739 1946 1585 2576 2700 3788 1784 2938 2889 4808 Transcription elongation factor (TFIIS) family protein (AHRD V3.3 *** A0A2U1PD57_ARTAN) AT5G09850 Solyc11g005460.2 348 355 297 275 189 215 278 276 259 289 185 162 302 329 309 ENTH/VHS, Target of Myb protein 1 (AHRD V3.3 *-* A0A2U1Q4R9_ARTAN) AT5G63640 Solyc11g005470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Enzyme inhibitor, putative (AHRD V3.3 *** B9RED7_RICCO) AT5G24370 Solyc11g005480.2 9 4 0 12 0 0 0 0 0 6 0 5 9 4 39 Citrate binding protein (AHRD V3.3 *** Q8H9C1_SOLTU) Solyc11g005490.1 0 1 1 1 16 5 4 13 1 0 1 3 1 0 0 Fasciclin-like arabinogalactan protein 19 (AHRD V3.3 *-* A0A1J3K1N5_NOCCA) AT1G15190 Solyc11g005500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Egg cell-secreted protein 1.2 (AHRD V3.3 *** A0A2G2Y744_CAPAN) AT1G76750 Solyc11g005510.1 12 4 19 16 5 6 1 2 0 1 2 0 4 2 11 Agenet domain containing protein (AHRD V3.3 *-* A0A2P5F8D2_TREOI) Solyc11g005520.3 4 1 0 0 0 0 1 1 0 3 0 0 7 0 0 Agenet domain containing protein (AHRD V3.3 *-* A0A2P5F8D2_TREOI) Solyc11g005525.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Agenet domain containing protein (AHRD V3.3 *-* A0A2P5ANH6_PARAD) Solyc11g005540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Egg cell-secreted protein 1.2 (AHRD V3.3 *** A0A2G3B1U6_CAPCH) Solyc11g005550.2 333 264 394 347 296 372 385 251 247 317 263 299 405 361 374 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PXE4_ARTAN) AT5G64730 Solyc11g005560.3 260 299 683 412 294 340 363 313 395 491 572 438 296 482 438 Cellulose synthase (AHRD V3.3 *** K4D4G9_SOLLC) Solyc11g005570.2 344 333 328 256 349 376 305 380 362 143 395 261 432 411 384 axoneme-associated protein MST101(2) protein (AHRD V3.3 *** AT2G44820.1) AT2G44820 Solyc11g005580.1 527 344 402 286 212 313 304 251 265 293 393 303 257 294 367 Ribosomal RNA small subunit methyltransferase H (AHRD V3.3 *** A0A200QZ92_9MAGN) AT5G10910 Solyc11g005590.1 897 600 745 810 658 672 662 606 546 676 628 581 608 646 623 SKIP5-like protein AT3G54480 Solyc11g005600.2 1252 1307 1153 1179 1009 1002 1191 1046 1099 1122 1170 1080 1124 1405 1123 Translation initiation factor eIF-2B subunit beta (AHRD V3.3 *** A0A1J3HDS0_NOCCA) AT3G07300 Solyc11g005610.1 0 6 0 0 0 0 0 0 0 1 0 0 0 0 0 Transcription factor GRAS (AHRD V3.3 *** A0A200PYP2_9MAGN) Solyc11g005615.1 251 308 142 185 271 203 190 351 304 536 102 448 226 244 127 Unknown protein Solyc11g005620.1 1003 1349 1069 1089 1454 1123 1208 1378 1411 1472 999 1555 1420 1395 638 Acetylglutamate kinase (AHRD V3.3 *** A0A1U8EW67_CAPAN) AT3G57560 Solyc11g005630.1 1503 873 1632 520 137 101 81 79 330 1165 1216 250 2182 817 571 G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 (AHRD V3.3 *** A0A2I4HSV3_9ROSI) Solyc11g005635.1 374 197 249 245 110 161 164 62 103 101 284 126 161 210 514 Ubiquitin (AHRD V3.3 *-* G8H6H0_PAPSO) Solyc11g005650.1 323 181 193 186 64 92 130 66 108 100 162 61 79 194 145 Ubiquitin (AHRD V3.3 *** F2Z6M3_IPONI) Solyc11g005660.2 231 147 102 109 84 68 83 115 136 140 118 120 81 142 110 Serine/threonine-protein kinase (AHRD V3.3 *** A0A0K0XQY4_TOBAC) AT1G49180 Solyc11g005670.2 20214 9824 4111 5480 3000 3287 3008 2778 5268 6666 6413 5234 6395 5699 7329 POLYUBIQUITIN 1 Solyc11g005675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 (AHRD V3.3 *-* A0A2I4EKU1_9ROSI) Solyc11g005680.2 6913 7538 9781 7882 7956 10176 9506 7230 5019 4813 7685 5992 8323 7722 9749 40S ribosomal protein S18 (AHRD V3.3 *** A0A2G3B1S6_CAPCH) AT1G34030 Solyc11g005690.3 74 410 576 353 576 594 664 663 458 280 294 529 288 562 285 TONSOKU protein (AHRD V3.3 *** Q4W7J1_TOBAC) AT3G18730 Solyc11g005700.1 189 153 274 164 234 281 198 188 159 121 244 134 243 186 156 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VFF2_CAPBA) AT5G64660 Solyc11g005710.2 47 44 116 70 62 107 128 91 67 49 130 77 36 37 51 WD40 repeat (AHRD V3.3 *** A0A200QPD0_9MAGN) AT1G48870 Solyc11g005720.1 726 530 573 431 340 297 323 300 276 342 1083 424 479 407 431 VQ motif family protein (AHRD V3.3 *** B6SZE5_MAIZE) Solyc11g005730.3 60 144 176 208 224 219 227 143 161 119 179 209 136 160 150 Histone-lysine N-methyltransferase ATXR5 (AHRD V3.3 *** A0A2G2VFH7_CAPBA) AT5G09790 Solyc11g005740.2 7 25 36 15 24 30 23 22 7 3 1 9 11 19 0 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* B3H578_ARATH) Solyc11g005750.2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 Pectinesterase (AHRD V3.3 *** A0A2I4GT13_9ROSI) Solyc11g005760.3 4 40 4 32 36 15 11 31 17 31 23 12 3 14 61 Hexosyltransferase (AHRD V3.3 *** K4D4I9_SOLLC) AT3G18660 Solyc11g005770.2 587 1300 2046 2592 3382 3166 2807 2707 2330 1935 2332 2147 2234 1956 2182 Pectinesterase (AHRD V3.3 *** A0A2I4GT13_9ROSI) AT5G09760 Solyc11g005780.3 1 0 0 17 0 0 1 0 0 0 0 2 0 0 0 bHLH transcription factor158 AT5G09750 Solyc11g005790.3 8 21 26 37 39 60 34 30 10 13 29 42 16 16 19 Protein trichome berefringence-like 7 (AHRD V3.3 *** A0A2G3B1R7_CAPCH) AT1G48880 Solyc11g005800.2 123 498 493 328 622 585 710 642 439 282 335 513 354 559 242 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1QNA9_ARTAN) AT5G64630 Solyc11g005810.2 1273 1075 1334 1222 1057 1181 1288 933 913 777 1258 959 1049 1126 1544 intracellular protein transporter (AHRD V3.3 *** AT4G27610.9) AT4G27620 Solyc11g005820.1 123 660 346 616 1462 960 813 1528 598 372 243 704 749 533 186 Pectinesterase inhibitor domain-containing protein (AHRD V3.3 *** A0A2U1P2H7_ARTAN) AT5G64620 Solyc11g005830.2 0 3 0 5 6 6 5 2 0 0 0 1 0 6 20 Cysteine desulfurylase (AHRD V3.3 *** A0A2K3L3S2_TRIPR) Solyc11g005840.2 1 2 22 7 0 6 6 5 6 7 0 4 0 11 5 Aminotransferase (AHRD V3.3 *** A0A200PUW3_9MAGN) Solyc11g005845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein TAPETUM DETERMINANT 1-like (AHRD V3.3 *** A0A2I4H4K2_9ROSI) Solyc11g005860.2 0 0 0 2 0 1 0 0 2 1 4 0 0 0 0 Aminotransferase (AHRD V3.3 *** A0A200PUW3_9MAGN) Solyc11g005870.2 267 276 323 352 273 267 311 228 196 203 375 232 256 314 335 O-fucosyltransferase (AHRD V3.3 *** A0A2P5E9J2_TREOI) AT5G64600 Solyc11g005880.2 135 314 539 475 501 544 567 440 368 225 538 361 361 383 441 NADH-ubiquinone oxidoreductase-related protein (AHRD V3.3 *** A0A2U1MTF0_ARTAN) AT2G47690 Solyc11g005890.3 0 0 0 0 0 0 0 0 0 0 2 0 0 3 0 2S globulin (AHRD V3.3 *** A0A2U1PHR7_ARTAN) Solyc11g005900.2 334 459 337 336 454 420 376 458 418 326 318 441 441 433 386 Guanylate kinase-like (AHRD V3.3 *** A0A200PUL8_9MAGN) AT3G06200 Solyc11g005910.2 1282 1151 1035 1143 1004 1074 1152 1118 1036 1163 946 1057 1008 1395 1132 Phosphatidylinositol 4-kinase beta 1 (AHRD V3.3 *** A0A1U8F2W0_CAPAN) AT5G64070 Solyc11g005920.3 4564 1976 2124 1868 1134 1255 1326 1133 1543 2653 1793 1187 2367 2339 2059 NAC domain-containing protein 16 (AHRD V3.3 *** A0A1U8EWF0_CAPAN) AT5G09330 Solyc11g005930.2 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT4G33467.2) AT4G33467 Solyc11g005935.1 317 187 271 232 261 284 275 170 176 188 288 164 202 214 309 Unknown protein Solyc11g005940.3 266 253 225 196 223 235 220 242 219 196 188 166 197 248 189 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QNS5_9MAGN) AT4G19440 Solyc11g005950.2 1001 1202 1050 1008 1445 1144 1120 1625 1309 1510 1001 1535 1054 1076 663 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2VFK2_CAPBA) AT2G13690 Solyc11g005960.1 53 65 44 57 43 55 61 44 45 50 29 75 42 52 41 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8EYH8_CAPAN) AT1G20230 Solyc11g005970.1 16 18 11 18 21 17 10 18 14 17 27 15 6 17 12 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RCH3_9MAGN) AT3G24000 Solyc11g005980.3 3 8 17 4 7 10 12 12 1 4 0 3 6 1 0 Callose synthase (AHRD V3.3 *** K7PRK8_MAIZE) AT2G13680 Solyc11g005990.2 3 0 0 0 0 0 0 0 0 0 0 1 0 2 0 Transcriptional corepressor SEUSS (AHRD V3.3 *-* A0A2G2ZPK0_CAPAN) Solyc11g006000.3 2585 1868 3480 1997 1449 1429 1437 1324 2323 2954 3254 1495 1786 2129 2340 MAP kinase kinase kinase 80 AT1G53570 Solyc11g006010.3 27 62 107 71 82 100 128 89 40 34 40 76 29 62 52 DNA repair metallo-beta-lactamase family protein (AHRD V3.3 *** F4IDZ7_ARATH) AT1G19025 Solyc11g006020.2 190 266 423 374 249 271 279 196 300 168 575 211 276 244 524 NADH dehydrogenase-like complex O (AHRD V3.3 *-* A0A0F7GY98_9ASPA) AT1G74880 Solyc11g006030.1 17 5 23 2 0 0 2 1 11 9 27 3 10 7 10 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VFH1_CAPBA) AT5G37490 Solyc11g006040.2 431 960 1084 662 1181 1373 1308 1234 1192 512 927 862 497 790 356 Receptor protein kinase (AHRD V3.3 *** A0A2R6RJ70_ACTCH) AT1G66150 Solyc11g006050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** F1DGA5_COFAR) Solyc11g006060.2 431 711 481 1432 625 401 579 933 768 1177 628 607 637 656 437 Rubisco accumulation factor 1, chloroplastic (AHRD V3.3 *** A0A2G2VFE2_CAPBA) AT3G04550 Solyc11g006070.3 1199 2002 1466 1435 1299 1439 1442 1134 1096 937 1005 1032 3087 2197 1774 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A1U8EU36_CAPAN) Solyc11g006080.2 1097 1012 848 842 1086 971 877 1068 975 890 1004 984 1082 909 1002 nucleolar/coiled-body phosphoprotein (AHRD V3.3 *** AT3G04560.1) AT3G04560 Solyc11g006090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2G2Y6T0_CAPAN) AT3G04570 Solyc11g006100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A1Q3DDP0_CEPFO) Solyc11g006110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A1J3D183_NOCCA) Solyc11g006120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2I4E3P4_9ROSI) Solyc11g006130.2 210 212 179 207 184 215 239 198 129 163 186 143 182 165 179 Methyltransferase-like protein (AHRD V3.3 *** A0A2G3B1C8_CAPCH),Pfam:PF13489 AT1G54650 Solyc11g006150.1 6 1 3 0 2 9 11 8 6 3 8 0 0 5 5 Ethylene receptor (AHRD V3.3 *-* Q9XET9_SOLLC) Solyc11g006160.3 1 1 6 1 0 0 0 0 0 5 0 3 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2VFE0_CAPBA) Solyc11g006170.3 1184 1267 785 908 1072 1098 953 1527 1229 1252 848 1411 1268 1138 823 Chaperone dnaJ-domain containing protein (AHRD V3.3 *-* A0A2K3MJF2_TRIPR) Solyc11g006180.2 680 418 535 453 263 330 307 283 475 447 596 344 350 410 660 ethylene receptor homolog (ETR5) AT3G04580 Solyc11g006190.3 1614 780 980 1142 665 690 814 577 639 1327 1398 781 671 803 1014 AT-hook motif nuclear-localized protein 1 (AHRD V3.3 *** A0A2G2Y739_CAPAN) AT3G04590 Solyc11g006200.2 696 504 476 294 171 225 204 182 380 270 374 326 538 689 472 Homeobox domain-containing protein/DDT domain-containing protein (AHRD V3.3 *** A0A1Q3BK61_CEPFO) AT4G12750 Solyc11g006205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g006210.3 173 71 71 95 58 39 50 47 37 26 100 57 99 127 183 Unknown protein Solyc11g006220.2 5 28 15 20 67 70 73 50 31 10 12 43 27 9 9 Myosin family protein (AHRD V3.3 *** A0A2U1N6F7_ARTAN) AT1G54560 Solyc11g006230.3 2987 1377 1453 1270 2489 2454 2244 2538 1190 1753 1435 1775 1248 1089 668 GRF1-interacting factor 1 (AHRD V3.3 *-* A0A2G2Y6I7_CAPAN) Solyc11g006240.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g150100.1 502 439 323 408 296 389 332 339 299 285 408 302 342 393 526 Zinc finger (C2H2 type) family protein (AHRD V3.3 *** A0A2U1PV63_ARTAN) AT4G12240 Solyc11g006250.2 815 3071 2912 2769 2116 2461 1992 2271 3172 2460 2746 3242 2265 1593 468 GDSL-motif lipase/hydrolase family protein 2 Solyc11g006260.2 0 0 1 0 0 0 0 0 0 0 3 0 0 1 0 Defensin-like protein (AHRD V3.3 *** A0A314KXD1_NICAT),Pfam:PF00304 AT5G63660 Solyc11g006270.2 256 183 275 186 152 176 157 202 126 189 142 182 132 156 172 3-oxo-5-alpha-steroid 4-dehydrogenase (AHRD V3.3 *** A0A200PYH0_9MAGN) Solyc11g006280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g006290.2 69 87 4 40 19 17 24 24 22 19 1 8 53 4 1 3-oxo-5-alpha-steroid 4-dehydrogenase (AHRD V3.3 *** A0A200PYH0_9MAGN) Solyc11g006300.2 81 223 50 118 400 390 431 309 90 75 12 53 57 7 0 3-oxo-5-alpha-steroid 4-dehydrogenase (AHRD V3.3 *** A0A200PYH0_9MAGN) AT5G16010 Solyc11g006310.2 3 1 0 4 0 0 0 0 0 0 0 0 0 2 0 protein GAMETE EXPRESSED 1 (AHRD V3.3 *** A0A2I4EBQ9_9ROSI) AT5G55490 Solyc11g006320.2 1440 1590 1160 1359 1162 1287 1178 1380 1560 1493 1102 1240 1995 1829 1245 Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** A0A2G3B1E4_CAPCH) Solyc11g006330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine Rich Repeat family protein, expressed (AHRD V3.3 *-* Q2R0Y6_ORYSJ) Solyc11g006340.2 1190 928 733 615 594 681 673 648 509 601 394 626 891 929 678 Phosphoribosylaminoimidazole carboxylase (AHRD V3.3 *** A0A2G2Y6X3_CAPAN) AT2G37690 Solyc11g006350.1 401 698 519 363 398 428 353 393 440 431 370 508 683 622 282 aspatate carbamoyltransferase AT3G20330 Solyc11g006360.1 581 197 237 159 155 152 146 201 197 217 250 126 173 174 369 E3 ubiquitin-protein ligase (AHRD V3.3 *-* AT3G19990.2) Solyc11g006370.2 1231 915 717 792 872 923 889 1009 961 781 830 785 773 865 820 Calcium-dependent protein kinase (AHRD V3.3 *** A0A060N6D3_SOLTU) AT5G04870 Solyc11g006380.2 446 887 600 628 860 745 747 711 706 509 522 572 1006 943 669 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VF73_CAPBA) AT1G60770 Solyc11g006390.2 6462 4792 3232 3647 3345 3632 4082 3736 3267 3968 3050 4013 3229 3741 3201 nuclear pore complex protein NUP1-like (AHRD V3.3 *-* A0A2I4DIV8_9ROSI) AT3G10650 Solyc11g006400.2 503 634 473 440 620 599 611 581 467 448 404 498 762 654 574 Mitochondrial glycoprotein (AHRD V3.3 *** A0A200Q9R6_9MAGN) AT4G32605 Solyc11g006410.2 376 273 315 340 226 249 275 192 373 318 402 199 358 259 333 EEIG1/EHBP1 N-terminal domain (AHRD V3.3 *** A0A200Q9Q9_9MAGN) Solyc11g006420.2 39 254 344 375 409 409 468 418 270 156 235 271 203 309 179 Pyrimidine 5'-nucleotidase (AHRD V3.3 *** A0A200Q9M8_9MAGN) AT2G38680 Solyc11g006430.1 6 129 110 166 369 282 254 333 156 69 157 193 22 62 70 Glutaredoxin (AHRD V3.3 *** A0A200Q9V6_9MAGN) AT5G01420 Solyc11g006440.1 0 0 0 4 1 0 1 0 1 3 0 0 0 0 0 Cupredoxin (AHRD V3.3 *** A0A2U1LF28_ARTAN) Solyc11g006450.3 1 7 6 0 0 0 0 1 1 0 0 0 1 0 3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1MY73_ARTAN) Solyc11g006455.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 CASP-like protein (AHRD V3.3 *** A0A2G2ZG68_CAPAN) Solyc11g006460.3 27425 13907 10834 12440 11445 13353 12129 10339 11892 12568 12530 12088 13139 12433 13981 DnaJ protein (AHRD V3.3 *** Q43177_SOLTU) AT3G44110 Solyc11g006470.2 1466 926 892 1024 892 829 768 804 570 1187 835 555 812 607 751 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MQ33_TRIPR) AT5G22070 Solyc11g006480.1 2058 1424 1045 1097 1132 993 824 1363 1239 1787 1053 1542 1675 1294 1092 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I4H4A1_9ROSI) AT3G12460 Solyc11g006485.1 14 5 41 10 11 27 6 12 19 13 15 8 12 5 8 Unknown protein Solyc11g006490.2 440 369 854 430 321 397 427 416 379 404 676 385 461 456 311 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *-* F4I9R1_ARATH) AT5G04840 Solyc11g006500.2 274 174 444 241 170 203 202 180 281 229 351 196 322 283 347 charged multivesicular body protein 5-like (AHRD V3.3 *** A0A2I4G8C5_9ROSI) AT3G10640 Solyc11g006505.1 77 89 102 219 147 186 123 131 51 111 15 47 143 57 136 Nuclear transport factor 2 (NTF2) family protein (AHRD V3.3 *** AT5G04830.2) AT5G04830 Solyc11g006520.2 84 84 19 78 13 31 8 25 21 42 29 20 51 57 107 Disease resistance protein (AHRD V3.3 *** A0A2U1NYN9_ARTAN) Solyc11g006530.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1M2V8_ARTAN) Solyc11g006540.2 134 160 388 140 160 229 122 127 178 162 268 193 494 192 215 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** Q9C574_ARATH) Solyc11g006550.3 599 734 866 946 683 636 725 597 1051 613 563 646 873 972 1062 urate oxidase AT2G26230 Solyc11g006560.3 38 69 74 85 98 111 83 84 87 67 46 64 49 71 58 Glycosyl transferase family 1 protein-like (AHRD V3.3 *** Q69TB4_ORYSJ) AT3G10630 Solyc11g006570.3 0 0 0 0 2 1 0 0 4 2 0 0 0 0 0 Inositol oxygenase (AHRD V3.3 *** A0A2U1PDJ1_ARTAN) Solyc11g006580.3 148 223 196 249 201 208 267 240 185 266 256 263 204 249 194 RNA pyrophosphohydrolase (AHRD V3.3 *** RPPH_RHOS5) AT3G10620 Solyc11g006590.2 106 98 70 115 104 89 78 75 233 195 153 171 126 83 149 Cytochrome (AHRD V3.3 *** A0A1U8G4E5_CAPAN) AT4G31500 Solyc11g006620.3 929 697 596 586 540 520 503 557 714 652 595 614 661 650 771 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1U8EZI1_CAPAN) AT5G03540 Solyc11g006630.1 6 5 12 11 0 0 4 4 3 2 9 1 14 4 26 Disease resistance protein (AHRD V3.3 *** A0A2U1M2V8_ARTAN) Solyc11g006635.1 2 0 0 3 0 0 0 0 0 0 0 2 0 0 0 Unknown protein Solyc11g006640.3 228 151 155 240 167 170 187 191 232 137 145 147 184 160 275 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc11g006650.3 400 548 354 352 503 452 501 562 559 536 324 427 461 494 335 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1KPR9_ARTAN) Solyc11g006660.3 919 1339 1005 995 1145 1122 1181 1251 1159 940 935 1154 1661 1487 975 Eukaryotic peptide chain release factor subunit 1 (AHRD V3.3 *** A0A2G2Y6K9_CAPAN) AT3G26618 Solyc11g006670.1 41 23 45 98 9 30 15 23 22 21 8 26 6 24 55 ovate family protein 29 AT5G04820 Solyc11g006675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein H (AHRD V3.3 *-* A0A2G3AK88_CAPAN) Solyc11g006680.3 761 645 754 1127 571 710 797 625 841 824 744 532 490 719 1007 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WCG1_9ASPA) AT5G04810 Solyc11g006690.1 3425 6133 5518 4207 5333 4667 4648 4903 4075 3309 4600 4003 7039 5428 6166 40S ribosomal protein S17 (AHRD V3.3 *** A0A2G2VEQ4_CAPBA) AT5G04800 Solyc11g006700.1 34 32 26 34 23 27 30 18 15 26 29 45 47 55 50 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8EYC4_CAPAN) AT5G04780 Solyc11g006710.2 2226 479 215 261 218 188 188 153 328 1597 392 383 238 168 118 Cationic amino acid transporter (AHRD V3.3 *** S8DTC6_9LAMI) AT3G10600 Solyc11g006720.2 400 92 156 102 99 55 66 54 70 351 201 91 154 137 165 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G3AV26_CAPCH) AT5G04760 Solyc11g006730.1 5 4 0 1 0 0 0 0 0 5 1 1 0 0 0 Germin (AHRD V3.3 *** A0A200QHW9_9MAGN) Solyc11g006750.1 118 91 91 89 29 63 58 59 59 79 70 64 112 105 120 F1F0-ATPase inhibitor protein (AHRD V3.3 --* AT5G04750.1) AT5G04750 Solyc11g006740.3 1759 163 438 261 107 117 94 109 302 160 111 158 160 216 178 F-box domain, Phloem protein 2-like protein (AHRD V3.3 *** A0A2U1NHQ2_ARTAN) Solyc11g006760.3 1014 904 944 762 955 839 720 834 938 717 931 783 1130 866 996 multiple myeloma tumor-associated protein 2 homolog (AHRD V3.3 *-* A0A2I4E2S4_9ROSI) AT3G52220 Solyc11g006770.3 456 638 959 793 1105 1040 1106 934 913 689 761 706 778 690 768 AMMECR1 family (AHRD V3.3 *** A0A2U1NY45_ARTAN) AT2G38710 Solyc11g006780.2 643 567 595 537 721 493 506 597 628 629 464 626 698 578 547 Vesicle-associated membrane protein (AHRD V3.3 *** A0A2G2Y6H0_CAPAN) AT3G54300 Solyc11g006783.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g006785.1 435 180 224 129 4 8 12 5 30 208 44 40 101 167 72 Unknown protein Solyc11g006787.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g006800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g006805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g006810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g006820.2 1436 1873 1789 1818 2899 2758 2704 2328 1631 1211 1938 1834 1874 1722 1708 Small nuclear ribonucleoprotein G (AHRD V3.3 *** A0A1U8EW56_CAPAN) AT3G11500 Solyc11g006830.2 193 238 237 194 342 342 314 316 216 294 297 297 179 195 143 Hemerythrin-like protein (AHRD V3.3 *** A0A2U1NY74_ARTAN) AT3G54290 Solyc11g006840.2 3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Unknown protein Solyc11g006850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein TAPETUM DETERMINANT 1-like (AHRD V3.3 *** A0A2I4H4K2_9ROSI) Solyc11g006860.2 133 310 302 222 430 371 446 416 287 213 274 303 341 305 197 Ribonuclease (AHRD V3.3 *** A0A2G2Y6A8_CAPAN) AT2G25100 Solyc11g006870.1 128 193 249 260 153 148 249 158 204 301 195 224 222 271 158 transmembrane protein 234 homolog isoform X2 (AHRD V3.3 *** A0A2I4DZZ7_9ROSI) AT5G19570 Solyc11g006880.3 884 728 1087 850 706 971 1020 715 564 607 988 688 733 822 964 jagunal-like protein (AHRD V3.3 *** AT5G51510.1) AT5G51510 Solyc11g006890.2 280 226 260 303 85 116 99 70 124 180 199 59 309 369 460 Unknown protein Solyc11g006900.1 69 62 67 74 83 72 60 87 111 45 94 47 99 74 113 hypothetical protein (AHRD V3.3 *** AT3G52710.1) Solyc11g006910.3 28 23 10 7 0 0 0 0 1 4 2 0 105 17 23 Ferredoxin (AHRD V3.3 *** K4D4V2_SOLLC) AT2G27510 Solyc11g006920.2 285 136 122 191 120 104 66 76 104 140 140 113 150 131 164 Iron-sulfur cluster assembly protein IscA (AHRD V3.3 *** Q944M8_CHLRE) AT2G16710 Solyc11g006930.3 56 73 111 75 159 78 137 87 66 77 153 140 56 77 81 4'-phosphopantetheinyl transferase superfamily (AHRD V3.3 *** A0A200QTH9_9MAGN) Solyc11g006940.3 153 168 197 191 165 207 192 154 198 91 121 179 183 205 240 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q9A9_9MAGN) AT5G37570 Solyc11g006950.3 4 1 16 6 6 10 9 5 0 7 1 11 3 8 2 Defensin-like protein (AHRD V3.3 *** A0A314LDH2_NICAT),Pfam:PF00304 AT5G63660 Solyc11g006955.1 2 4 0 0 0 0 2 1 0 0 0 0 0 5 0 Unknown protein Solyc11g006960.2 1476 1514 1693 1573 1716 1776 1950 1858 1792 1470 1623 1556 1441 1909 1461 spectrin beta chain%2C brain (AHRD V3.3 *** AT5G22450.3) AT5G22450 Solyc11g006970.2 764 796 851 1048 1335 1088 1064 1325 1107 936 870 1043 975 959 820 ACT domain-containing protein (AHRD V3.3 *** A0A1Q3CPR0_CEPFO) AT5G04740 Solyc11g006980.1 3 12 25 26 7 24 12 19 22 21 26 27 19 15 45 Germin-like protein subfamily 3 member 2 (AHRD V3.3 *** A0A1U8EXB4_CAPAN) AT3G10080 Solyc11g006990.2 108 299 322 357 474 308 349 368 351 210 332 290 347 375 827 Protein trichome birefringence-like 36 (AHRD V3.3 *** A0A2G2Y6D1_CAPAN) AT3G54260 Solyc11g007000.2 90 221 175 142 167 150 161 146 140 72 104 185 231 248 119 Cytochrome c oxidase assembly protein COX15 (AHRD V3.3 *** A0A2G2VF75_CAPBA) AT5G56090 Solyc11g007010.2 809 1074 835 635 665 677 712 555 577 507 622 597 1060 1141 885 Proline-, glutamic acid-and leucine-rich protein 1 (AHRD V3.3 *** A0A1J3ID65_NOCCA) AT1G30240 Solyc11g007020.2 577 1788 1391 1740 2275 2094 2270 2348 2189 1870 1649 2086 1762 2013 1447 mevalonate disphosphate decarboxylase AT3G54250 Solyc11g007030.3 38 72 109 64 99 76 32 96 67 72 64 49 82 67 30 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MAY4_ARTAN) Solyc11g007040.2 129 175 145 177 198 243 203 182 201 207 175 173 141 174 134 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MAY4_ARTAN) Solyc11g007050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protease inhibitor (AHRD V3.3 *** A0A2K3MP81_TRIPR) AT3G46860 Solyc11g007060.2 812 533 516 402 426 472 465 595 576 529 472 485 418 639 581 40S ribosomal protein S27 (AHRD V3.3 *-* AT5G47940.1) AT5G47940 Solyc11g007070.2 723 674 531 473 496 541 513 527 454 643 500 460 636 557 506 Mitochondrial substrate/solute carrier (AHRD V3.3 *** A0A200QN58_9MAGN) AT4G15010 Solyc11g007080.1 470 379 265 284 274 245 209 277 281 336 229 299 349 296 336 Protein YIPF (AHRD V3.3 *** A0A2G2VF65_CAPBA) AT2G36300 Solyc11g007090.3 173 247 245 309 286 268 279 359 329 256 211 307 306 297 174 Aspartyl aminopeptidase (AHRD V3.3 *** A0A2G2Y6D5_CAPAN) AT5G04710 Solyc11g007100.1 1 0 0 0 0 0 1 0 0 0 7 0 1 0 0 protein LITTLE ZIPPER 3 (AHRD V3.3 *-* A0A2I4E2N9_9ROSI) AT3G52770 Solyc11g007110.2 4957 4418 3961 4342 4087 4534 4822 4478 3720 4395 3470 3660 5040 4378 3614 R3H domain-containing protein (AHRD V3.3 *** A0A2K3NQ24_TRIPR) Solyc11g007120.2 1178 815 629 600 743 536 528 708 546 505 346 638 901 874 644 NifU-like protein (AHRD V3.3 *** A0A2K3MYY9_TRIPR) AT3G20970 Solyc11g007130.2 603 490 595 661 547 480 539 478 453 540 399 422 540 522 615 Major facilitator superfamily (AHRD V3.3 *** A0A200Q6B3_9MAGN) Solyc11g007140.2 11 12 5 14 0 0 0 0 4 4 0 0 5 4 15 Major facilitator superfamily (AHRD V3.3 *** A0A200Q6B3_9MAGN) Solyc11g007150.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g007160.2 141 184 181 186 200 146 224 178 189 129 202 141 190 213 205 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A1I9LPX6_ARATH) AT3G20930 Solyc11g007170.2 1486 750 755 801 536 428 506 548 866 969 815 594 911 869 1372 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** A0A2I0VAX0_9ASPA) Solyc11g007180.3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A314ZTH8_PRUYE) Solyc11g007190.2 6 9 17 15 0 0 0 0 6 10 3 1 2 10 21 Unknown protein Solyc11g007200.3 1157 1494 2297 2659 2376 1221 1246 2147 1259 1376 2588 392 1982 1607 2625 Heavy metal-associated isoprenylated plant protein 26 (AHRD V3.3 *** A0A2I0X9F5_9ASPA) AT3G56240 Solyc11g007210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4D4Y2_SOLLC) Solyc11g007220.2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4D4Y3_SOLLC) Solyc11g007230.1 11 42 37 22 39 37 13 17 28 14 16 21 44 43 51 pentatricopeptide repeat-containing protein At2g27610-like (AHRD V3.3 *** A0A2I4H998_9ROSI) Solyc11g007240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histidine-containing phosphotransfer protein (AHRD V3.3 *** Q4VWF0_WHEAT) Solyc11g007250.2 11 15 31 19 5 10 13 10 36 13 45 39 43 35 55 Protein kinase G11A (AHRD V3.3 *** A0A1U8F0W3_CAPAN) AT3G44610 Solyc11g007260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G2XPV4_CAPBA) Solyc11g007270.3 809 941 871 1132 1135 1145 1091 1027 1034 964 951 752 949 879 926 Alkaline/neutral invertase (AHRD V3.3 *** A0A0X8AZR5_CAMSI) AT5G22510 Solyc11g007280.3 2 2 0 3 0 0 12 1 6 0 1 2 0 3 0 Pleiotropic drug resistance protein 2 (AHRD V3.3 *** A0A2G2Y5Z4_CAPAN) AT2G36380 Solyc11g007290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance protein 2 (AHRD V3.3 *** A0A2G2Y5Z4_CAPAN) AT2G36380 Solyc11g007300.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance protein 2 (AHRD V3.3 *** A0A2G2VEZ6_CAPBA) AT2G36380 Solyc11g007310.3 128 157 172 186 262 326 307 301 130 132 119 128 137 141 112 XS domain (AHRD V3.3 *** A0A200PZP0_9MAGN) Solyc11g007320.2 864 843 1221 1312 1292 1269 1308 1014 833 990 1210 981 1018 1066 1248 Galactose oxidase/kelch repeat superfamily protein (AHRD V3.3 *** F4IMW1_ARATH) AT2G36360 Solyc11g007330.2 4 56 32 47 65 47 37 19 39 36 85 19 4 44 83 RAB6-interacting golgin (DUF662) (AHRD V3.3 *** Q9LFA1_ARATH) AT3G52900 Solyc11g007340.2 348 319 242 229 162 232 210 229 267 301 207 225 197 249 258 Plant tudor-like RNA-binding protein (AHRD V3.3 *** A0A072UR05_MEDTR) AT4G32440 Solyc11g007350.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 8 Glycosyltransferase (AHRD V3.3 *** A0A2I4G8J4_9ROSI) Solyc11g007360.1 136 119 126 202 105 151 127 82 123 110 126 138 149 177 247 BnaA09g09900D protein (AHRD V3.3 *-* A0A078ICT6_BRANA) Solyc11g007370.3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 10 Glycosyltransferase (AHRD V3.3 *** A0A288W8G7_GARJA) Solyc11g007380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4HKY2_9ROSI) Solyc11g007390.1 7 10 8 14 10 4 5 3 10 9 8 1 47 28 12 Glycosyltransferase (AHRD V3.3 *-* A0A2I4G8J4_9ROSI) Solyc11g007410.3 667 511 463 457 110 60 60 74 310 401 367 159 734 431 670 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3PPP5_TRIPR) Solyc11g007430.3 538 276 365 237 27 18 22 15 129 253 237 29 640 248 355 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3L8M9_TRIPR) Solyc11g007440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* C5NN15_CATRO) Solyc11g007450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4G8J4_9ROSI) Solyc11g007460.1 2 2 0 0 0 0 0 2 1 1 1 2 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4G8J4_9ROSI) Solyc11g007470.1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4G8J4_9ROSI) Solyc11g007480.1 0 1 1 4 0 0 1 1 7 5 8 9 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A2I4G8J4_9ROSI) Solyc11g007490.1 1 9 1 0 0 0 0 0 1 0 0 0 5 11 0 Glycosyltransferase (AHRD V3.3 *** A0A288W8G7_GARJA) Solyc11g007500.2 4 231 1 7 0 1 0 0 0 1 0 0 1698 8 58 Glycosyltransferase (AHRD V3.3 *-* A0A288W8G7_GARJA) Solyc11g007510.2 5282 3675 4279 3058 1483 1713 1892 1573 1960 3343 3874 1618 4529 2760 2499 transmembrane protein (AHRD V3.3 --* AT2G37300.6) AT3G52240 Solyc11g007520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protease Do-like 4, mitochondrial (AHRD V3.3 *** A0A2G2VF44_CAPBA) AT2G38790 Solyc11g007530.2 111 55 48 83 37 19 12 16 63 65 89 24 82 112 121 RING/U-box superfamily protein (AHRD V3.3 *-* A0A178VMT5_ARATH) Solyc11g007540.2 207 295 159 256 50 69 62 39 199 199 125 160 179 113 93 Cytochrome P450 (AHRD V3.3 *** A0A346CEB0_TANCI) Solyc11g007550.1 4 11 20 16 26 18 17 13 8 7 28 10 11 21 9 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** F4JWB9_ARATH) AT5G04610 Solyc11g007560.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional TENA-E protein (AHRD V3.3 *** A0A2G3B0Y9_CAPCH) Solyc11g007570.2 50 118 116 70 78 173 121 79 92 60 156 63 159 98 126 Bifunctional TENA-E protein (AHRD V3.3 *** A0A2G2VCV3_CAPBA) AT3G16990 Solyc11g007580.3 1519 1801 2112 1644 1637 1831 2022 1844 2713 2218 2069 1937 2150 1658 906 DNA demethylase 3 Solyc11g007585.1 1 4 2 1 3 3 5 4 9 1 0 1 1 3 0 Unknown protein Solyc11g007590.3 209 282 210 304 196 242 279 203 213 107 205 147 314 245 149 OTU domain-containing protein (AHRD V3.3 *** A0A2G3B0Z0_CAPCH) Solyc11g007600.2 0 19 23 28 11 9 10 7 8 16 11 10 8 1 1 Glucomannan 4-beta-mannosyltransferase 9 (AHRD V3.3 *** A0A1U8EU24_CAPAN) Solyc11g007610.2 706 933 679 609 683 728 691 736 609 497 536 603 943 920 691 ATP-dependent RNA helicase (AHRD V3.3 *** B6TU64_MAIZE) AT2G28600 Solyc11g007620.1 15 4 3 4 2 1 1 2 2 8 4 9 6 1 32 F-box domain (AHRD V3.3 *** A0A200QCQ8_9MAGN) Solyc11g007630.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Bark storage protein A (AHRD V3.3 *-* A0A1J3D3Y5_NOCCA) Solyc11g007640.2 15 39 30 40 53 57 80 42 17 16 35 36 26 22 22 Mitotic checkpoint protein BUB3, putative, expressed (AHRD V3.3 *-* Q75HB5_ORYSJ) Solyc11g007650.1 14 12 33 0 0 2 3 1 3 6 24 2 1 12 13 F-box domain (AHRD V3.3 *-* A0A200QCQ8_9MAGN) Solyc11g007660.1 1324 903 1284 877 509 579 537 544 938 961 1520 699 1006 857 944 DUF668 domain-containing protein/DUF3475 domain-containing protein (AHRD V3.3 *** A0A1Q3CD25_CEPFO) AT5G04550 Solyc11g007670.3 537 449 651 632 518 669 616 473 465 483 651 500 505 537 956 Phosphatidylinositol-3-phosphatase myotubularin-1 (AHRD V3.3 *** A0A2G2VEI5_CAPBA) AT3G10550 Solyc11g007680.2 1075 775 662 720 709 671 614 864 762 817 840 712 980 804 562 hypothetical protein (AHRD V3.3 *** AT3G52230.1) AT3G52230 Solyc11g007690.3 1715 1573 1658 1796 2408 2286 2011 2774 1998 1808 1431 2306 1573 1688 1596 Pyruvate kinase (AHRD V3.3 *** A0A2G2Y675_CAPAN) Solyc11g007700.2 525 549 584 402 478 495 470 393 397 394 410 407 583 657 481 mRNA cap guanine-N7 methyltransferase 2 (AHRD V3.3 *** A0A2G3B0Y4_CAPCH) AT3G52210 Solyc11g007710.2 64 198 190 256 255 300 307 264 212 125 216 200 264 241 150 BnaA03g01310D protein (AHRD V3.3 *** A0A078FA35_BRANA) AT5G04520 Solyc11g007720.2 761 1114 1044 1196 1354 1212 1441 1340 1128 1000 900 1045 1239 1216 1098 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (AHRD V3.3 *** A0A1U8F4C0_CAPAN) AT3G52200 Solyc11g007730.2 83 193 375 399 196 193 173 132 725 283 549 365 394 467 351 Bark storage protein A (AHRD V3.3 *** A0A1J3K1W0_NOCCA) AT4G24350 Solyc11g007740.2 394 482 460 281 305 316 329 281 252 228 281 245 530 558 445 Ribosome recycling factor (AHRD V3.3 *** A0A200QY71_9MAGN) AT3G01800 Solyc11g007750.3 50 70 64 31 39 45 32 47 46 21 19 22 62 67 58 tRNA-thr(GGU) m(6)t(6)A37 methyltransferase (AHRD V3.3 *** A0A1P8B5H4_ARATH) AT4G28020 Solyc11g007760.2 812 1134 1191 987 905 1079 1178 935 1107 677 1040 832 964 1188 1103 3-phosphoinositide-dependent protein kinase-1 AT3G10540 Solyc11g007770.2 1082 431 535 295 95 76 105 94 182 368 293 166 596 422 254 Glycosyltransferase family protein 64 protein C5 (AHRD V3.3 *** A0A2G2VEI7_CAPBA) AT5G04500 Solyc11g007780.2 946 847 765 601 477 511 484 525 621 621 581 582 1001 887 576 SEC12-like protein 1 (AHRD V3.3 *** A0A2I4HBY6_9ROSI) AT3G52190 Solyc11g007790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1P5P8_ARTAN) AT1G12210 Solyc11g007800.3 570 549 448 337 398 346 366 334 410 292 317 395 492 612 379 Ribonucleases P/MRP protein subunit POP1 (AHRD V3.3 *** A0A1J3EE83_NOCCA) AT2G47300 Solyc11g007810.3 273 248 208 224 231 329 286 287 276 204 279 289 263 262 176 RNA polymerase II%2C Rpb4%2C core protein (AHRD V3.3 --* AT5G62950.7) AT5G62950 Solyc11g007820.1 4 3 1 2 9 5 3 5 6 1 3 3 5 6 3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** F4JWB9_ARATH) AT5G04610 Solyc11g007825.1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g007830.2 472 404 467 563 271 225 316 228 756 464 583 508 581 550 881 protein tyrosine phosphatase AT3G52180 Solyc11g007840.3 200 252 299 312 293 346 303 306 356 185 328 239 298 294 328 UDP-Glycosyltransferase superfamily protein (AHRD V3.3 *** AT5G04480.1) AT5G04480 Solyc11g007850.2 1064 975 867 632 720 671 654 634 679 650 658 703 976 986 916 DNA-binding protein PD2 (AHRD V3.3 *** A0A2K3PGZ7_TRIPR) AT3G52170 Solyc11g007860.1 513 344 427 483 203 177 188 159 204 418 419 231 427 334 606 Cyclin-dependent protein kinase inhibitor SMR3 (AHRD V3.3 --* SMR3_ARATH) AT5G02420 Solyc11g007870.1 3 14 7 17 0 3 4 0 6 1 8 10 21 11 25 hypothetical protein (AHRD V3.3 --* AT3G20898.1) AT3G20898 Solyc11g007880.1 2 0 2 12 0 0 0 1 2 0 2 0 0 1 0 Self-pruning interacting protein 1 (AHRD V3.3 *** Q9FR57_SOLLC) AT3G20898 Solyc11g007890.2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4INZ9_ARATH) AT2G36690 Solyc11g007900.3 136 693 789 713 927 924 1062 919 1165 370 1064 696 556 769 727 EEIG1/EHBP1 N-terminal domain (AHRD V3.3 *-* A0A200R5E0_9MAGN) Solyc11g007910.2 631 952 702 880 785 753 811 668 1385 754 1097 775 767 921 1032 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L030_ARTAN) AT5G04460 Solyc11g007915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3AQH1_CEPFO) Solyc11g007920.1 1579 5407 6248 5823 8986 9163 8341 9909 5600 4176 4613 8395 3329 6267 2863 Histone H2B (AHRD V3.3 *-* A0A200PZ88_9MAGN) AT3G45980 Solyc11g007930.1 161 1866 1964 2099 2690 2154 2324 2588 1152 973 1451 1933 527 1673 612 Histone H2B (AHRD V3.3 *** A0A328DBY2_9ASTE) Solyc11g007940.2 16 127 138 167 214 156 191 226 134 79 105 152 130 171 77 Protein BTR1 (AHRD V3.3 *** A0A2G2VF13_CAPBA) AT5G04430 Solyc11g007945.1 1 0 0 3 0 0 4 0 0 1 0 1 0 1 0 Unknown protein Solyc11g007960.2 644 1108 1232 1002 1341 1276 1315 1398 1208 997 1053 1088 976 940 1208 acyl-CoA-binding domain-containing protein 4 (AHRD V3.3 *** A0A2I4GVW9_9ROSI) AT5G04420 Solyc11g007970.2 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 4-coumarate--CoA ligase-like 5 (AHRD V3.3 *** A0A2I4GVX2_9ROSI) Solyc11g007980.2 32 10 5 39 0 0 0 0 3 3 7 0 11 14 58 Cytochrome (AHRD V3.3 *** A0A1U8F0H8_CAPAN) Solyc11g007990.2 1034 1822 1523 1689 2700 2461 2532 2951 2446 1783 1513 2121 1329 1613 1640 chloroplast malate dehydrogenase (mdh) AT5G58330 Solyc11g008000.2 1060 1176 1261 1505 1088 1273 1249 1075 1393 1054 1067 1171 1715 1576 1430 NAC domain-containing protein 16 (AHRD V3.3 *** A0A2G2VA66_CAPBA) AT5G04410 Solyc11g008010.2 4142 2143 3054 2428 1916 2291 1813 1915 1978 3285 2333 2783 1978 2437 1839 NAC domain-containing protein (AHRD V3.3 *** A0A2U1M7X2_ARTAN) AT3G10480 Solyc11g008020.2 236 81 86 119 98 99 91 72 71 133 113 146 121 105 169 Ras-related protein RABC2a (AHRD V3.3 *** A0A1U8EYM4_CAPAN) Solyc11g008030.3 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 monocopper oxidase-like protein SKU5 (AHRD V3.3 *** A0A2I4GW01_9ROSI) Solyc11g008040.3 102 156 229 291 230 321 312 200 201 145 270 178 294 309 396 Pullulanase 1, chloroplastic (AHRD V3.3 *** A0A2G3AZH1_CAPCH) Solyc11g008050.1 64 73 101 145 112 139 180 125 124 56 103 140 115 157 212 Pullulanase 1, chloroplastic (AHRD V3.3 *** A0A2G2VA72_CAPBA) Solyc11g008060.1 18 45 29 12 39 14 27 44 49 18 7 41 23 34 14 Pullulanase 1, chloroplastic (AHRD V3.3 *-* A0A2G2VA72_CAPBA) Solyc11g008070.1 6 7 16 20 17 24 40 44 7 15 7 19 11 14 1 Hyccin (AHRD V3.3 *** A0A2U1PKY1_ARTAN) AT5G21050 Solyc11g008080.3 85 288 302 460 497 399 503 444 331 234 245 262 391 289 324 Enabled-like protein (DUF1635) (AHRD V3.3 *** F4KBD8_ARATH) Solyc11g008090.2 263 390 346 376 592 607 676 520 340 257 426 345 259 382 337 shugoshin-1-like (AHRD V3.3 *** A0A2I4G173_9ROSI) AT3G10440 Solyc11g008100.3 396 409 284 312 423 362 423 308 321 273 372 228 267 263 290 translocase subunit seca (AHRD V3.3 *-* AT1G13390.2) Solyc11g008110.1 206 207 141 127 144 103 187 207 224 163 98 185 163 173 146 Nuclear pore complex protein NUP88 (AHRD V3.3 *-* A0A2G2YE72_CAPAN) Solyc11g008120.3 933 788 829 802 709 835 924 701 714 636 668 716 795 915 833 Nuclear pore complex protein NUP88 (AHRD V3.3 *** A0A2G2YE72_CAPAN) AT5G05680 Solyc11g008140.3 31 52 78 97 90 76 88 58 75 33 108 73 60 69 134 Pectate lyase (AHRD V3.3 *** A0A2G3AZH6_CAPCH) AT5G04310 Solyc11g008150.3 3869 3155 3181 3077 2751 3407 3403 3224 3746 2920 3461 3222 2327 3138 3355 Transcription elongation factor Spt5 (AHRD V3.3 *-* A0A200R5H6_9MAGN) AT5G04290 Solyc11g008180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily (AHRD V3.3 *-* A0A2U1MQP6_ARTAN) Solyc11g008190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily (AHRD V3.3 *-* A0A2U1Q7R9_ARTAN) Solyc11g008200.2 115 83 208 82 19 10 11 5 50 47 124 17 287 129 51 Major facilitator superfamily (AHRD V3.3 *** A0A2U1MQP6_ARTAN) Solyc11g008210.3 1476 982 1023 906 801 859 906 762 847 507 1103 744 975 937 1282 glycine-rich RNA-binding protein RZ1C-like (AHRD V3.3 *-* A0A2I4DY40_9ROSI) AT5G04280 Solyc11g008220.3 172 99 76 80 74 76 85 80 89 106 56 106 91 99 44 Unknown protein Solyc11g008223.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g008227.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g008230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SKP1-like protein 11 (AHRD V3.3 *** A0A2G2VA77_CAPBA) Solyc11g008240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SKP1-like protein 11 (AHRD V3.3 *** A0A2G2VA77_CAPBA) Solyc11g008245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g008250.2 899 553 246 657 552 578 519 511 618 911 256 572 340 264 253 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LNZ5_ARTAN) AT3G10420 Solyc11g008260.2 184 226 276 236 606 505 468 686 558 384 461 504 166 281 624 Cysteine proteinase 15A (AHRD V3.3 *** A0A1U8EZ26_CAPAN) AT3G54940 Solyc11g008270.2 2250 1443 2792 2175 3368 3669 3548 2424 2353 2545 3363 2286 1774 1738 2147 DUF4050 domain-containing protein (AHRD V3.3 *** A0A1Q3AYV9_CEPFO) AT3G54880 Solyc11g008280.3 1561 1366 1816 1203 1355 1251 1275 1270 2077 1524 1671 1631 1995 1855 1818 Carboxypeptidase (AHRD V3.3 *** A0A1U8EV97_CAPAN) AT3G10410 Solyc11g008290.1 293 244 181 148 253 228 183 235 167 205 160 223 294 306 187 RNA binding protein (AHRD V3.3 *** B6U3T0_MAIZE) AT3G10400 Solyc11g008300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G3B5C9_CAPCH) Solyc11g008310.3 1407 1173 1262 1075 914 876 846 935 1216 1088 847 986 1465 1153 1059 Protein MEF2BNB-like protein (AHRD V3.3 *** A0A1J3J2M0_NOCCA) AT2G39170 Solyc11g008320.3 837 854 738 737 625 749 741 771 710 769 616 731 900 762 595 Lysine-specific histone demethylase 1-like protein 3 (AHRD V3.3 *** A0A1U8F4Y3_CAPAN) AT3G10390 Solyc11g008330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SNARE-like superfamily protein (AHRD V3.3 *** A0A2U1KJN4_ARTAN) Solyc11g008340.3 1364 1417 1170 1258 1344 1328 1456 1507 1683 1440 1039 1451 1352 1567 1270 Exocyst complex component SEC8 (AHRD V3.3 *** A0A2G3B0U3_CAPCH) AT3G10380 Solyc11g008350.2 217 286 280 324 418 393 475 468 459 289 406 333 307 323 341 Kinesin-like protein (AHRD V3.3 *** A0A2R6PKY9_ACTCH) AT3G54870 Solyc11g008360.3 1379 1124 1258 1316 1268 1302 1222 1158 1016 1109 1129 1184 928 1125 1348 Pseudouridine synthase family protein (AHRD V3.3 *** A0A1P8AXV3_ARATH) AT2G39140 Solyc11g008380.3 378 494 371 435 427 421 388 366 451 344 260 364 468 504 363 Glycerol-3-phosphate dehydrogenase (AHRD V3.3 *** A0A2G3AV54_CAPCH) AT3G10370 Solyc11g008390.2 904 651 706 660 575 675 631 544 660 647 709 543 724 699 776 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8EX65_CAPAN) AT3G54850 Solyc11g008400.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SLF-interacting SKP1 (AHRD V3.3 *** D3TVS8_PETHY) Solyc11g008410.3 0 1 0 0 0 0 0 2 1 0 0 0 0 0 0 heat stress transcription factor A-6b-like (AHRD V3.3 *-* XP_025884194.1) Solyc11g008420.3 140 260 308 235 261 336 279 244 229 151 220 231 412 352 256 SKP1-like protein (AHRD V3.3 *** A0A2K3JJY8_TRIPR) Solyc11g008430.2 629 602 566 583 654 671 647 613 645 748 582 659 684 672 677 Ras-related protein Rab-5C (AHRD V3.3 *** A0A1U8EYT0_CAPAN) AT3G54840 Solyc11g008440.3 415 261 790 543 681 403 485 453 338 290 385 233 266 498 1461 Amino acid transporter (AHRD V3.3 *** A0A200R5Q3_9MAGN) AT2G39130 Solyc11g008450.2 177 127 221 169 119 94 95 100 136 119 101 124 205 189 122 Thioredoxin (AHRD V3.3 *-* A0A2U1NHJ4_ARTAN) AT5G04260 Solyc11g008460.1 1383 860 1608 792 738 1001 708 750 1201 725 1692 942 781 1072 2060 SART-1 family protein DOT2 (AHRD V3.3 *-* A0A1U8F4I8_CAPAN) Solyc11g008470.2 2279 1658 1592 1252 1056 1387 1414 1100 1701 1323 1578 1251 1438 1604 1901 SART-1 family protein DOT2 (AHRD V3.3 *** A0A1U8F4I8_CAPAN) AT5G16780 Solyc11g008480.2 80 94 69 59 128 139 125 161 78 67 125 108 38 29 58 Photosystem II PsbP (AHRD V3.3 *** A0A200Q1H1_9MAGN) AT3G05410 Solyc11g008490.3 32 17 10 7 6 2 23 3 5 13 23 6 3 7 47 Pumilio-like protein 2 (AHRD V3.3 *** A0A2G2Y5N2_CAPAN) Solyc11g008500.2 187 445 417 425 543 534 577 556 420 302 382 433 471 445 324 Actin-related protein (AHRD V3.3 *** A0A2R6Q6P8_ACTCH) AT3G60830 Solyc11g008510.3 16056 20199 25838 21263 23605 25720 25402 18936 10144 13360 23155 16868 19456 18343 22750 60S ribosomal protein L38 (AHRD V3.3 *** A0A2G3B0P8_CAPCH) AT2G43460 Solyc11g008520.3 0 4 5 2 1 0 2 4 0 1 0 0 1 1 0 Dicer-like 2c AT3G03300 Solyc11g008530.3 2544 882 1161 764 76 44 71 64 273 868 521 271 1600 805 883 Dicer-like 2d AT3G03300 Solyc11g008540.3 7945 3251 5008 3871 1507 1321 1474 1232 2471 5640 3141 1785 7069 3655 3748 Dicer-like 2b AT3G03300 Solyc11g008550.3 698 302 249 307 272 304 397 272 385 488 420 356 713 476 500 Phospholipase A(1) LCAT3 (AHRD V3.3 *** A0A2G3B0N5_CAPCH) AT3G03310 Solyc11g008560.2 0 0 1 0 0 0 0 3 0 0 0 0 0 0 0 AP2-like ethylene-responsive transcription factor BBM (AHRD V3.3 *** A0A2G2VE87_CAPBA) AT5G17430 Solyc11g008570.2 296 317 408 361 358 375 373 323 319 274 323 337 299 327 346 Metallophosphoesterase domain-containing protein (AHRD V3.3 *** A0A2U1MK24_ARTAN) AT3G03305 Solyc11g008580.3 4214 2157 1744 1819 1396 1455 1342 1478 1886 2329 1947 1764 1728 2025 2389 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VEE2_CAPBA) AT1G65430 Solyc11g008590.2 308 549 521 686 639 837 813 655 467 526 516 485 477 522 454 CMP-sialic acid transporter 4 (AHRD V3.3 *** A0A2G2VE94_CAPBA) AT4G35335 Solyc11g008600.1 4 2 0 3 0 0 0 0 0 0 0 0 8 3 5 cotton fiber protein (AHRD V3.3 *** AT5G57510.1) AT5G57510 Solyc11g008610.3 142 310 398 371 344 322 385 375 309 331 341 327 366 413 438 CMP-sialic acid transporter 2 (AHRD V3.3 *** A0A1U8EWJ1_CAPAN) Solyc11g008620.2 543 1245 904 1047 1484 1535 1382 1392 1204 943 761 910 1038 802 912 Phosphoglycolate phosphatase (AHRD V3.3 *** A0A2G3B0Q7_CAPCH) AT5G36790 Solyc11g008630.3 1202 1784 1047 1360 444 365 233 361 1604 1127 1244 1440 2003 959 1141 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1LG13_ARTAN) AT1G65450 Solyc11g008640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flowering locus T (AHRD V3.3 *** A0A1B4WGF0_PETHY) Solyc11g008650.1 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 Flowering locus T (AHRD V3.3 *-* A0A1B4WGF0_PETHY) Solyc11g008670.2 1293 1739 1740 1729 1781 1958 2066 1748 1434 1384 1372 1877 1234 1873 1071 Chromatin assembly factor 1 subunit FAS1 (AHRD V3.3 *** A0A2G2VEF8_CAPBA) AT1G65470 Solyc11g008680.2 86 294 244 267 399 371 369 422 324 242 345 330 249 265 184 Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *** A0A2G3B0E0_CAPCH) Solyc11g008700.2 1135 1000 706 655 914 1076 939 1141 861 737 669 952 781 803 773 splicing factor U2AF-associated protein 2 (AHRD V3.3 *** A0A2I4FMJ6_9ROSI) AT5G16260 Solyc11g008710.2 386 852 704 600 710 776 847 730 665 426 578 603 884 850 620 30S ribosomal protein S5 (AHRD V3.3 *** A0A1J3IX82_NOCCA) AT1G64880 Solyc11g008720.3 55 46 44 46 25 55 34 52 35 55 36 61 44 79 36 Beta-glucosidase (AHRD V3.3 *** A0A2G2VEH4_CAPBA) AT5G36890 Solyc11g008730.2 693 544 521 558 556 556 629 409 552 427 657 455 574 625 638 U11/U12 small nuclear ribonucleoprotein 25 kDa protein (AHRD V3.3 *** A0A2G2VEB7_CAPBA) AT3G07860 Solyc11g008740.2 2965 2454 2117 1827 1956 2102 2070 2365 2516 2392 1644 2210 2208 2529 1749 Sister chromatid cohesion 1 protein 4 (AHRD V3.3 *** A0A1U8ESX9_CAPAN) AT5G16270 Solyc11g008750.1 2 1 0 0 0 0 0 0 0 3 1 0 3 0 0 Unknown protein Solyc11g008760.3 84 60 27 84 104 79 79 101 93 58 35 80 79 60 62 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VE96_CAPBA) AT4G01570 Solyc11g008770.2 538 837 668 585 731 646 635 778 1019 542 561 733 1114 973 879 LETM1 domain-containing protein (AHRD V3.3 *** A0A1Q3CV52_CEPFO) AT1G65540 Solyc11g008780.3 254 462 341 349 388 354 397 499 460 277 280 372 416 424 323 Acetolactate synthase small subunit 1, chloroplastic (AHRD V3.3 *** A0A1U8ET50_CAPAN) AT5G16290 Solyc11g008790.3 53 64 85 72 74 94 101 75 73 40 98 58 49 87 120 Arv1-like protein (AHRD V3.3 *** A0A2U1KZM6_ARTAN) AT1G01020 Solyc11g008800.3 1505 1246 992 1162 1019 1255 1227 961 1138 1123 1226 883 1134 1319 1699 type I inositol polyphosphate 5-phosphatase 12-like (AHRD V3.3 *** A0A2I4G632_9ROSI) AT1G65580 Solyc11g008810.2 135 557 552 603 1076 1121 1100 1135 878 370 782 744 350 524 495 Beta-hexosaminidase (AHRD V3.3 *** M1BC44_SOLTU) AT1G65590 Solyc11g008820.2 2 1 1 5 0 5 0 0 5 2 0 9 2 1 7 Endoglucanase (AHRD V3.3 *** A0A2G2VEA7_CAPBA) AT1G65610 Solyc11g008830.2 74 117 166 173 122 110 90 89 75 53 83 170 41 176 79 LOB domain-containing protein 6 (AHRD V3.3 *** A0A2G3B0H5_CAPCH) AT1G65620 Solyc11g008840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 flocculation FLO11-like protein (AHRD V3.3 *-* AT2G40070.2) Solyc11g008850.2 471 567 556 335 313 281 341 335 200 184 310 292 663 635 454 protease Do-like 10, mitochondrial (AHRD V3.3 *** A0A2I4HM77_9ROSI) AT5G36950 Solyc11g008860.3 0 3 42 2 0 0 9 5 0 1 0 0 9 0 0 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A2G2VEA3_CAPBA) AT1G55570 Solyc11g008870.2 1016 4892 2976 3751 5985 4830 5367 6196 5934 4406 2926 3898 4319 3718 2689 Methylenetetrahydrofolate reductase (AHRD V3.3 *** A0A1U8F633_CAPAN) AT2G44160 Solyc11g008880.2 19 27 34 39 20 17 22 24 16 26 27 17 14 38 63 CRIB domain (AHRD V3.3 *** A0A200PTZ8_9MAGN) AT5G16490 Solyc11g008890.2 1330 1608 1544 1784 1902 2008 2022 1748 1742 1869 2060 1639 1463 1319 1591 GDT1-like protein 3 (AHRD V3.3 *** A0A2G3B0H6_CAPCH) AT5G36290 Solyc11g008900.2 2977 1958 1739 2542 2606 2579 2550 2161 1833 2915 2211 1996 1849 1492 2497 Zinc finger transcription factor 65 AT3G02830 Solyc11g008905.1 15 9 12 24 30 19 12 21 9 14 12 5 12 12 7 Unknown protein Solyc11g008910.2 82 167 165 219 265 248 248 204 176 122 241 128 122 137 117 ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** AT1G65295.1) AT1G65295 Solyc11g008920.1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 Unknown protein Solyc11g008930.3 0 0 7 0 0 0 0 0 0 2 0 0 0 0 2 Lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707) (AHRD V3.3 *** F4JRK4_ARATH) Solyc11g008940.1 187 265 188 215 225 182 177 281 191 139 144 205 232 267 216 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1KES0_ARTAN) AT3G46790 Solyc11g008950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g008960.3 1303 825 1165 923 813 944 866 733 858 1053 1188 884 988 877 920 Receptor-like protein kinase (AHRD V3.3 *** A0A0K9P3X9_ZOSMR) AT5G10290 Solyc11g008970.1 48 53 62 50 28 56 59 51 44 31 33 55 68 52 44 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2Y5J6_CAPAN) AT4G39952 Solyc11g008980.1 365 658 475 3217 748 712 1324 1106 624 1495 391 760 558 777 266 Protein TIC 20-II, chloroplastic (AHRD V3.3 *** A0A2G2Y5G4_CAPAN) AT2G47840 Solyc11g008990.2 795 916 916 749 931 911 968 734 932 662 897 670 916 978 1159 Phage shock protein A, PspA (AHRD V3.3 *** B2J6D9_NOSP7) AT1G65260 Solyc11g009000.2 132 126 72 84 72 75 38 42 83 139 67 85 110 86 63 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q4PSG2_ARATH) Solyc11g009010.2 301 267 229 242 152 214 135 149 239 230 246 223 396 277 437 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* Q058J1_ARATH) Solyc11g009020.2 28 96 163 89 123 144 142 162 124 60 114 106 96 119 144 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1MUT6_ARTAN),Pfam:PF13419 AT4G39970 Solyc11g009030.1 124 134 117 95 165 145 148 158 91 127 63 98 117 105 82 glycine-rich protein (AHRD V3.3 *** AT4G10330.1) AT4G10330 Solyc11g009040.3 17 42 68 48 87 74 59 84 37 16 51 82 37 58 27 EPIDERMAL PATTERNING FACTOR-like protein 1 (AHRD V3.3 *** A0A2G2WTE5_CAPBA),Pfam:PF17181 AT5G10310 Solyc11g009050.3 2211 1237 2201 1647 1807 2182 1919 1590 1268 1339 1552 1722 1115 1323 1400 F-box protein FBW2 (AHRD V3.3 *** A0A2G2Y589_CAPAN) AT4G08980 Solyc11g009060.2 386 259 576 611 542 530 549 559 324 326 576 331 473 423 683 ATP synthase subunit B (AHRD V3.3 *** AT5G10320.1) AT5G10320 Solyc11g009070.2 268 535 590 505 747 727 706 922 532 551 510 749 581 541 459 Transmembrane protein (AHRD V3.3 *** Q9FJP0_ARATH) AT5G65250 Solyc11g009080.2 21780 15233 15796 17908 25375 21507 21361 22646 21709 24041 19167 26349 9702 13976 15299 DAHP synthase 1 precursor AT4G39980 Solyc11g009090.2 1874 2168 2396 1890 2138 2376 2395 2010 2021 1172 2087 1551 2359 2279 2112 Polyadenylate-binding protein (AHRD V3.3 *** G5DWR4_SILLA) AT5G65260 Solyc11g009100.2 5 1 4 0 0 0 0 0 0 0 0 0 2 4 1 ABC transporter-like (AHRD V3.3 *-* A0A200QYY8_9MAGN) Solyc11g010100.2 328 517 476 468 397 452 399 391 428 313 349 375 462 464 513 Ras-related protein RABA4a (AHRD V3.3 *** A0A2G2Y594_CAPAN) AT5G65270 Solyc11g010110.3 1720 1759 1313 1156 1398 1297 1362 1531 1418 1163 1235 1296 1446 1616 1346 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** Q8L601_ARATH) AT2G22400 Solyc11g010120.2 830 452 727 965 753 769 546 491 397 434 583 621 264 479 524 Peroxidase (AHRD V3.3 *** K4D5H3_SOLLC) AT2G22420 Solyc11g010130.3 30 11 27 35 3 0 7 5 18 18 34 2 25 18 101 Protein kinase (AHRD V3.3 *** Q40264_MESCR) AT4G40010 Solyc11g010140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g010160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A200RBM1_9MAGN) Solyc11g010170.2 1020 1283 1439 1122 1468 1803 1761 1584 2112 3663 2401 3007 1205 1333 1725 LanC-like protein GCL1 (AHRD V3.3 *** A0A1U8EWL4_CAPAN) AT5G65280 Solyc11g010180.2 661 920 896 769 904 793 924 878 601 596 653 720 1286 923 1094 Mitochondrial ribosomal protein L37 (AHRD V3.3 *-* Q1PDW9_ARATH) AT3G01740 Solyc11g010190.1 3208 5293 3084 3054 4338 3310 2775 4393 3424 3185 2700 4176 6324 4171 2617 Prohibitin (AHRD V3.3 *** O04361_TOBAC) AT5G40770 Solyc11g010200.3 1990 2924 3130 1871 4164 3974 3533 4599 2583 3584 3058 3539 2306 1683 1158 14-3-3 family protein AF079104 AT1G78300 Solyc11g010210.1 156 108 113 69 67 76 49 49 108 70 109 92 101 89 131 WEB family protein At4g27595, chloroplastic-like (AHRD V3.3 *** A0A2I4GYN3_9ROSI) AT4G40020 Solyc11g010220.2 27 39 72 32 22 27 23 34 35 23 46 44 40 54 41 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RDY1_9MAGN) Solyc11g010230.2 9408 9671 11322 10015 10289 11128 10078 10602 10174 10918 9971 12384 11428 10067 9292 Histone H3 (AHRD V3.3 *** A0A2K1J132_PHYPA) AT4G40040 Solyc11g010240.3 1630 1361 1438 1471 1348 1660 1682 1361 1047 1220 1228 1258 1171 1136 911 protein SCAI (AHRD V3.3 *** A0A2I4GV29_9ROSI) AT4G40050 Solyc11g010245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc11g010250.1 666 832 1840 384 666 470 381 551 498 701 3899 1230 963 539 1303 Avr9/Cf-9 rapidly elicited protein 75 (AHRD V3.3 *** Q9FQY9_TOBAC) AT1G35210 Solyc11g010260.3 19 38 29 26 25 44 30 37 45 29 14 44 30 40 28 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1Q4D8_ARTAN) AT1G28690 Solyc11g010270.2 5242 6699 9148 9308 10772 11343 10533 9053 7974 4584 7735 6482 11004 9950 8470 Homeobox-leucine zipper protein HOX4 (AHRD V3.3 *** A0A2G2Y5D1_CAPAN) AT2G22430 Solyc11g010280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Unknown protein Solyc11g010290.2 29 40 45 56 35 18 18 21 15 34 12 17 63 78 74 Dicarboxylate transporter 2.1, chloroplastic (AHRD V3.3 *** A0A2G2Y5B9_CAPAN) Solyc11g010300.2 336 363 310 337 290 276 236 282 408 269 346 266 342 376 302 3,4-dihydroxy-2-butanone 4-phosphate synthase (AHRD V3.3 *** A0A147KHG0_9ACTN) Solyc11g010310.2 992 893 654 784 669 814 734 728 994 1075 762 920 1017 857 776 ATP-dependent RNA helicase DEAH11, chloroplastic-like (AHRD V3.3 *** A0A2I4EF57_9ROSI) AT4G01020 Solyc11g010320.1 15 6 4 4 9 1 2 4 9 7 14 1 6 4 0 Transmembrane protein (AHRD V3.3 *** F4IJ67_ARATH) Solyc11g010330.3 455 194 362 206 40 38 28 21 145 269 348 70 222 215 205 RING/U-box superfamily protein (AHRD V3.3 *-* F4JJ02_ARATH) Solyc11g010340.2 140 298 357 315 430 410 294 422 207 258 224 282 159 321 162 bHLH transcription factor 069 Solyc11g010350.2 183 203 215 212 209 265 297 258 219 147 310 246 173 225 159 'putative glucan 1,3-beta-glucosidase (AHRD V3.3 *** Q5W708_ORYSJ) Solyc11g010360.3 22 30 56 58 8 4 3 9 25 25 49 4 62 39 57 protein MIZU-KUSSEI 1-like (AHRD V3.3 *** A0A2I4FF71_9ROSI) AT5G65340 Solyc11g010370.1 585 477 272 716 430 353 348 441 312 320 369 340 408 415 1031 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** A0A2U1QGP5_ARTAN) AT4G40080 Solyc11g010380.2 1617 1515 208 321 812 695 668 829 323 1974 277 378 4212 650 626 Protein DETOXIFICATION (AHRD V3.3 *** A0A328DDG5_9ASTE) AT5G65380 Solyc11g010390.1 6597 3105 6493 3837 2391 1509 1352 1584 1530 4375 4489 3864 4658 2980 3630 Unknown protein Solyc11g010400.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QGX7_ARTAN) Solyc11g010410.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1NR61_ARTAN) Solyc11g010420.3 14 28 40 40 39 23 26 17 51 55 50 59 62 22 35 Dihydrofolate reductase-like protein (AHRD V3.3 *** A0A2K3MS55_TRIPR) AT5G65400 Solyc11g010430.2 66 76 47 84 2 12 8 4 55 47 36 36 70 50 55 Dihydrofolate reductase-like protein (AHRD V3.3 *** A0A2K3MS55_TRIPR) AT5G65400 Solyc11g010440.3 54 68 106 135 166 167 191 116 90 97 123 75 120 133 150 GLABRA2 expression modulator (AHRD V3.3 *** A0A2G3CDH1_CAPCH) Solyc11g010450.2 275 521 684 795 737 680 763 680 668 548 635 542 741 683 743 ATP-dependent 6-phosphofructokinase (AHRD V3.3 *** A0A1U8EYR8_CAPAN) AT2G22480 Solyc11g010460.3 31 183 241 183 262 358 391 288 157 74 209 179 124 168 106 cyclinD4_1 Solyc11g010470.2 5462 4056 4237 3831 4576 4870 4709 4189 3056 3290 4029 3303 4931 3486 5060 14-3-3 protein (AHRD V3.3 *** P93787_SOLTU) Solyc11g010480.2 329 445 327 285 275 243 225 288 415 325 220 340 471 451 257 Protein CURVATURE THYLAKOID 1A, chloroplastic (AHRD V3.3 *** A0A2G3B0C6_CAPCH) Solyc11g010490.3 1316 1035 1128 889 717 771 884 887 991 735 763 700 927 1101 946 transmembrane protein (AHRD V3.3 *** AT5G65440.7) Solyc11g010500.1 1428 1711 2108 1035 663 732 681 565 684 571 2741 727 1941 1104 2067 Mitochondrial uncoupling protein 6 (AHRD V3.3 *** A0A2G3B0B9_CAPCH) AT2G22500 Solyc11g010510.2 145 185 310 219 225 229 211 186 132 179 287 170 164 180 229 Impact (AHRD V3.3 *** A0A200PNK4_9MAGN) AT4G38090 Solyc11g010520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 glycine-rich cell wall structural protein-like (AHRD V3.3 *** XP_004250142.1) Solyc11g010530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g010540.1 1 10 29 47 48 30 23 73 9 6 18 25 21 21 2 DnaJ domain-containing protein (AHRD V3.3 *** A0A1Q3ATZ1_CEPFO) Solyc11g010550.2 232 225 202 193 213 240 345 210 181 215 167 225 138 247 237 GPI ethanolamine phosphate transferase 2-like protein (AHRD V3.3 *** A0A2K3NW54_TRIPR) AT2G22530 Solyc11g010560.3 1555 1851 1057 1163 1878 1692 1768 2072 1827 1472 1154 1513 1153 1258 1253 Kinesin (AHRD V3.3 *** A0A200PNK3_9MAGN) AT5G65460 Solyc11g010570.2 429 419 457 390 1443 1231 1081 1243 606 379 711 704 656 582 498 jointless AT2G22540 Solyc11g010580.2 476 852 657 816 940 793 693 1031 802 843 638 800 812 674 661 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1LT66_ARTAN) AT3G27230 Solyc11g010590.3 10 3 14 4 1 2 3 7 1 2 12 1 3 13 2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (AHRD V3.3 *** A0A2G2Y571_CAPAN) Solyc11g010600.2 18919 11979 11989 12737 8506 7690 7773 8995 14682 15200 15739 11798 9327 11903 20619 O-fucosyltransferase (AHRD V3.3 *** A0A2P5EGU4_TREOI) Solyc11g010610.2 1903 1656 1576 1630 1713 1550 1618 1494 1844 1702 1545 1548 1756 1775 1659 Mechanosensitive ion channel protein 2, chloroplastic (AHRD V3.3 *** A0A2G3B0A1_CAPCH) AT5G10490 Solyc11g010620.3 38 267 265 298 568 616 575 601 325 129 217 336 42 148 158 basic helix loop helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT4G38062.1) AT4G38070 Solyc11g010630.4 911 392 242 350 374 350 362 302 250 368 221 266 323 267 248 Kinase-interacting protein 1 (AHRD V3.3 *** A0A1U8F6F0_CAPAN) AT2G22560 Solyc11g010650.4 661 616 741 865 697 658 698 471 780 778 1111 623 744 671 1064 Nicotinamidase 1 (AHRD V3.3 *** A0A2G3B093_CAPCH) Solyc11g010660.2 2344 1692 1219 1518 935 803 943 1154 1029 1579 1078 1312 1191 1427 1119 Protein SGT1-like protein (AHRD V3.3 *** A0A2G3B092_CAPCH) AT5G65490 Solyc11g010670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g010680.4 289 200 238 203 180 153 185 137 155 186 293 122 286 185 198 Protein SKIP34 (AHRD V3.3 *** A0A2G3B0A4_CAPCH) AT5G65495 Solyc11g010690.3 798 601 874 613 699 876 799 733 606 593 633 737 379 557 780 Nucleobase-ascorbate transporter 11 (AHRD V3.3 *-* A0A2G2Y5P1_CAPAN) Solyc11g010700.3 298 182 104 167 122 37 37 46 206 172 207 121 241 215 267 Protein kinase domain (AHRD V3.3 *** A0A200PNG8_9MAGN) AT5G65500 Solyc11g010710.2 2190 2562 4364 3119 4309 4791 4212 4164 2419 2277 3727 4653 2324 2870 2294 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A2U1KLN5_ARTAN) AT5G10510 Solyc11g010720.1 576 648 467 825 625 490 490 754 559 865 486 676 706 725 396 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** Q9LSM3_ARATH) AT5G65520 Solyc11g010730.3 1458 1211 1527 1175 1524 1731 1372 1501 1496 959 2052 1573 872 1547 2163 Receptor-like cytosolic serine/threonine-protein kinase RBK1 (AHRD V3.3 *** A0A2G3B0B2_CAPCH) AT5G65530 Solyc11g010735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A0K9RIQ3_SPIOL) Solyc11g010740.3 3 2 3 2 0 0 0 0 0 0 10 2 0 0 3 Glycosyltransferase (AHRD V3.3 *** A0A2U1PXH3_ARTAN) Solyc11g010750.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Glycosyltransferase (AHRD V3.3 *-* A0A2U1PXH3_ARTAN) Solyc11g010760.1 21 65 15 35 44 34 30 32 23 20 12 19 18 21 23 Glycosyltransferase (AHRD V3.3 *** A0A2U1PXH3_ARTAN) Solyc11g010770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g010780.1 25 101 16 64 60 53 73 58 97 50 47 50 38 65 18 UDP-glycosyltransferase 91A1 (AHRD V3.3 *** A0A2G2VDW8_CAPBA) AT2G22590 Solyc11g010790.1 0 5 8 3 1 3 3 0 0 2 14 1 0 0 0 UDP-glycosyltransferase 91A1 (AHRD V3.3 *** A0A2G2Y5N3_CAPAN) AT2G22590 Solyc11g010800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UDP-glycosyltransferase 91A1 (AHRD V3.3 *** A0A2G2Y5N3_CAPAN) Solyc11g010810.1 433 985 802 982 1729 1111 1012 1529 2061 1649 1223 2255 670 1098 844 UDP-glycosyltransferase 91A1 (AHRD V3.3 *** A0A2G2Y5N3_CAPAN) AT2G22590 Solyc11g010813.1 0 2 12 3 11 15 2 11 20 7 12 19 9 9 6 UDP-glycosyltransferase 91A1 (AHRD V3.3 *** A0A2G3B0B4_CAPCH) AT2G22590 Solyc11g010815.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VDL0_9ASPA) Solyc11g010817.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc11g010840.2 887 601 495 428 417 465 435 502 541 596 592 492 494 635 529 KH domain-containing protein (AHRD V3.3 *** A0A2I0WKQ9_9ASPA) Solyc11g010845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MRP1_TRIPR) Solyc11g010850.2 355 2262 412 982 2819 2036 1860 2730 5109 4192 2028 4233 1248 1163 328 1-deoxy-d-xylulose-5-phosphate synthase 1 (AHRD V3.3 *** A0A2U1PQH9_ARTAN) Solyc11g010860.3 0 0 0 0 0 0 0 0 0 3 0 4 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* Q3ED97_ARATH) AT1G18770 Solyc11g010870.2 210 133 155 210 114 153 161 105 87 146 105 184 116 113 100 Unknown protein Solyc11g010890.3 459 584 561 674 759 612 605 854 676 720 616 977 533 561 428 Exostosin-like (AHRD V3.3 *** A0A200PNJ6_9MAGN) AT4G38040 Solyc11g010880.2 0 0 5 4 3 10 2 10 10 3 0 4 1 4 0 BnaA01g07660D protein (AHRD V3.3 *-* A0A078IGT4_BRANA) Solyc11g010900.2 121 100 127 69 77 103 125 94 92 79 117 80 94 150 143 tRNA/rRNA methyltransferase (AHRD V3.3 *** A0A200PNH1_9MAGN) AT4G38020 Solyc11g010910.3 434 333 310 323 341 321 262 332 374 254 343 250 339 408 364 WD40 repeat (AHRD V3.3 *** A0A200QQ70_9MAGN) AT4G29860 Solyc11g010920.3 402 1125 1050 1230 1925 2023 1866 2309 1405 741 1110 1367 396 841 716 Kinesin-4 (AHRD V3.3 *** A0A2G3B0C5_CAPCH) AT2G22610 Solyc11g010930.2 139 91 32 58 43 22 20 10 47 49 16 33 66 31 81 HVA22-like protein (AHRD V3.3 *** A0A2G3B0A8_CAPCH) AT5G50720 Solyc11g010940.2 72 31 49 59 23 40 15 18 14 32 31 48 1 57 21 Dof zinc finger protein (AHRD V3.3 *** A0A2K3P763_TRIPR) AT5G65590 Solyc11g010950.2 387 494 435 418 347 301 312 303 416 292 464 404 476 445 435 Elongator complex protein 4 (AHRD V3.3 *** A0A1U8EZY2_CAPAN) AT3G11220 Solyc11g010960.2 877 1931 1616 2622 1777 1806 1444 1451 2198 1461 1811 2359 1651 1702 1177 Alcohol dehydrogenase (AHRD V3.3 *** A0A1Y1I027_KLENI) AT4G37990 Solyc11g010980.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *** A0A2K3NKU1_TRIPR) AT4G37990 Solyc11g010990.3 0 30 29 18 53 41 76 38 27 22 6 10 6 11 4 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *** A0A2K3MPD7_TRIPR) AT4G37990 Solyc11g011000.2 19 146 69 141 377 279 270 312 71 65 89 130 127 88 56 Cysteine-rich repeat secretory protein 60 (AHRD V3.3 *** A0A2G2VDA1_CAPBA) AT5G37660 Solyc11g011010.1 455 1290 1186 1278 1464 1580 1392 1440 845 865 697 1131 1066 1153 1198 B-cell receptor-associated-like protein (AHRD V3.3 *** Q9FFJ0_ARATH) AT5G17190 Solyc11g011020.2 207 1150 1154 920 1302 1285 1218 1167 1119 691 930 824 673 791 833 Ovary receptor kinase 11 (AHRD V3.3 *** S4WG09_SOLCH) Solyc11g011030.2 528 2675 1002 1163 1866 1516 1484 1807 2407 4501 1766 2883 1464 1594 578 Pto-responsive gene 1 Solyc11g011040.2 255 219 309 239 157 183 147 158 210 227 194 154 325 256 201 ADP-ribosylation factor-like protein 8B (AHRD V3.3 *** A0A2G3AZN4_CAPCH) AT5G37680 Solyc11g011050.2 53 38 89 16 42 49 47 52 14 35 42 62 45 26 118 R2R3MYB transcription factor 43 AT1G66230 Solyc11g011060.3 933 541 634 542 218 242 242 262 358 483 583 337 458 610 607 hypothetical protein (AHRD V3.3 *-* AT5G16610.2) Solyc11g011080.3 885 487 487 429 219 231 229 227 514 542 491 303 372 458 393 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3NNZ4_TRIPR) Solyc11g011090.1 780 535 789 712 348 520 467 321 636 541 894 342 423 484 709 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3P9P3_TRIPR) Solyc11g011100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g011110.3 5 6 0 3 0 0 1 0 1 1 0 2 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A1U8GTX9_CAPAN) AT5G37690 Solyc11g011120.2 250 219 206 240 262 277 210 231 188 253 220 190 183 190 203 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NG96_ARTAN) AT5G37710 Solyc11g011130.3 4143 2889 4039 3443 2126 2312 2227 1822 2058 2497 3236 1885 4939 3440 3401 THO complex subunit 4D (AHRD V3.3 *-* A0A2G2Y4P8_CAPAN) AT5G37720 Solyc11g011140.2 997 1166 1212 885 904 955 812 1047 1062 869 1007 943 1296 1098 1177 50S ribosomal protein l23-like (AHRD V3.3 *** A0A2K3MRP9_TRIPR) AT4G39880 Solyc11g011150.2 815 563 534 525 501 487 514 485 445 519 447 513 500 547 605 DNA repair protein Rad4 family (AHRD V3.3 *** A0A2U1M2U6_ARTAN) AT5G16630 Solyc11g011160.1 4981 2175 2762 1675 3463 3179 2468 3276 1908 3489 2174 3168 811 1105 765 HMG-Y-related protein A-like (AHRD V3.3 *** A0A2G2Y4T4_CAPAN) Solyc11g011170.2 2143 1548 825 1250 1629 1344 1346 1605 1087 1691 908 1001 1236 867 686 Senescence-associated family protein (AHRD V3.3 *** A0A2U1QIG8_ARTAN) AT1G66330 Solyc11g011180.3 536 181 118 126 0 0 1 3 27 78 198 16 252 237 161 Lrr receptor-like serinethreonine-protein kinase gso1 (AHRD V3.3 *** A0A1J6IBH9_NICAT) AT1G74170 Solyc11g011190.1 319 292 215 302 267 259 192 206 307 360 352 272 452 306 187 Exostosin-like protein (AHRD V3.3 *** A0A2U1NB95_ARTAN) Solyc11g011200.2 392 540 551 628 559 617 578 471 454 386 411 381 612 641 646 Per1-like (AHRD V3.3 *** A0A200PW77_9MAGN) Solyc11g011210.2 29 103 148 298 107 119 141 65 79 172 163 50 191 195 1275 Gibberellin-regulated protein 12 (AHRD V3.3 *** A0A1U8GMV5_CAPAN) AT3G02885 Solyc11g011220.2 1770 1437 1487 1252 1588 1518 1448 1407 1471 1519 1483 1545 1939 1575 1600 transmembrane protein (Protein of unknown function DUF2359%2C transmembrane) (AHRD V3.3 *** AT1G23170.2) Solyc11g011230.3 1015 642 722 885 671 734 724 626 604 722 692 585 695 669 754 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *** A0A1Q3BUG5_CEPFO) Solyc11g011240.1 16 12 13 7 0 0 1 6 11 13 1 1 34 23 14 geranylgeranyl pyrophosphate synthase 1 Solyc11g011250.3 827 1071 891 829 813 663 595 815 891 870 676 827 1283 1076 1067 dehydroascorbate reductase 2 AT5G16710 Solyc11g011260.1 2110 3538 2158 2775 3935 3881 3827 4251 3653 2303 1995 2859 2795 2789 2310 GAI AT2G01570 Solyc11g011270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Rhamnogalacturonate lyase (AHRD V3.3 *** A0A1J3FI43_NOCCA) Solyc11g011275.1 1 2 8 39 21 15 20 13 1 4 3 1 3 5 45 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) AT1G21280 Solyc11g011280.3 0 0 0 2 0 1 0 0 0 0 0 0 5 0 0 Rhamnogalacturonate lyase (AHRD V3.3 *-* A0A200QXQ6_9MAGN) Solyc11g011290.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Rhamnogalacturonate lyase (AHRD V3.3 *** A0A200QXQ6_9MAGN) Solyc11g011300.2 3 25 12 25 29 42 52 9 18 11 32 7 2 15 58 Rhamnogalacturonate lyase (AHRD V3.3 *** A0A200QXQ6_9MAGN) Solyc11g011310.3 7 83 212 214 304 380 345 321 86 90 105 159 21 78 107 Rhamnogalacturonate lyase family protein (AHRD V3.3 *** A0A2U1PQM1_ARTAN) AT2G22620 Solyc11g011320.1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Rhamnogalacturonate lyase family protein (AHRD V3.3 *** A0A2U1PQM1_ARTAN) Solyc11g011330.2 8 87 5 7 0 3 2 1 3 31 1 1 519 21 38 Cinnamyl alcohol dehydrogenase (AHRD V3.3 *** J7IAL0_FRAAN) AT4G37990 Solyc11g011340.2 49 196 1 5 0 0 0 0 34 128 2 3 1513 11 84 cultivar Rio Grande ELI3 AT4G37990 Solyc11g011350.3 239 124 135 92 52 92 66 66 108 123 96 120 103 130 70 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A2K3MNP1_TRIPR) Solyc11g011360.2 58 29 34 38 6 12 15 25 32 28 43 20 77 50 36 Nudix hydrolase 17, mitochondrial (AHRD V3.3 *** A0A1U8GUV5_CAPAN) Solyc11g011370.2 152 483 438 472 821 733 692 888 525 362 444 629 205 456 264 Condensin complex subunit 3 (AHRD V3.3 *** A0A1J3H4R8_NOCCA) AT5G37630 Solyc11g011373.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc11g011377.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g011380.2 5027 14727 10060 12182 10333 10106 9053 10626 15643 13123 10203 13961 17918 14637 9698 glutamine synthetase Solyc11g011390.3 946 597 468 506 394 350 366 412 563 478 533 339 528 648 694 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** F4K786_ARATH) AT5G37590 Solyc11g011400.2 6 3 4 14 7 10 15 16 11 7 0 6 17 2 20 Unknown protein Solyc11g011410.3 109 86 102 90 66 87 78 85 91 74 76 63 69 77 68 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PWA7_9MAGN) AT1G09680 Solyc11g011415.1 212 176 171 224 147 211 178 126 143 103 141 134 126 171 222 Unknown protein Solyc11g011420.3 509 588 582 669 606 698 620 691 680 501 545 589 734 740 661 Peptidylprolyl isomerase (AHRD V3.3 *** K4D5U7_SOLLC) AT3G54010 Solyc11g011430.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G3DB00_CAPCH) Solyc11g011440.1 2103 1177 779 706 157 217 149 241 491 977 765 475 557 1084 2045 aspartic proteinase PCS1-like (AHRD V3.3 *** A0A1U8GN15_CAPAN) AT5G37540 Solyc11g011450.2 18 51 34 61 44 21 47 25 31 26 33 24 79 57 48 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V (AHRD V3.3 *** A0A2U1PGK0_ARTAN) AT5G16940 Solyc11g011460.2 555 655 484 478 529 545 498 521 444 355 412 370 673 648 562 ATP-dependent RNA helicase (AHRD V3.3 *** A0A2U1PTP9_ARTAN) AT5G39840 Solyc11g011470.2 3737 4546 3851 3669 4185 4241 4353 4535 4531 3825 3857 3824 4005 4014 4380 NADH-quinone oxidoreductase (AHRD V3.3 *** A0A248JWT1_9PROT) AT5G37510 Solyc11g011480.2 971 1178 1077 1076 1191 1108 1113 1166 930 973 843 976 1156 1107 994 Nicastrin (AHRD V3.3 *** A0A2G2Y4U5_CAPAN) AT3G52640 Solyc11g011490.2 257 332 197 150 283 235 238 279 234 229 196 241 268 285 195 Zinc ion binding protein (AHRD V3.3 *** A0A2U1KM01_ARTAN) AT3G02860 Solyc11g011495.1 105 121 170 107 155 158 152 92 143 66 172 101 160 129 183 zinc finger protein 830 (AHRD V3.3 *-* XP_004250205.1) Solyc11g011500.2 0 8 7 7 23 8 18 27 29 12 5 24 1 15 14 Potassium channel SKOR (AHRD V3.3 *** A0A2G3AZU6_CAPCH) AT3G02850 Solyc11g011510.1 8 2 13 16 18 17 12 7 12 2 18 10 6 7 16 Unknown protein Solyc11g011530.2 60 28 26 26 33 34 11 24 42 19 23 32 14 22 4 F-box/FBD/LRR-repeat protein At1g13570-like (AHRD V3.3 --* XP_025884213.1) Solyc11g011533.1 1129 617 644 597 329 479 500 226 369 414 583 526 586 764 890 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *** A0A1Q3BUG5_CEPFO) Solyc11g011537.1 519 328 470 351 246 297 345 250 233 260 378 258 347 427 368 F-box domain-containing protein/FBD domain-containing protein (AHRD V3.3 *** A0A1Q3BUG5_CEPFO) Solyc11g011560.3 0 1 0 0 2 1 0 0 2 0 0 0 0 0 0 PHD finger protein MALE MEIOCYTE DEATH 1 (AHRD V3.3 *** A0A2G3AZS9_CAPCH) AT1G66170 Solyc11g011570.1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) AT5G54990 Solyc11g011580.2 6 3 39 16 10 15 9 10 17 1 15 1 7 12 11 GRAM domain (AHRD V3.3 *** A0A200Q501_9MAGN) AT5G23370 Solyc11g011585.1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 Unknown protein Solyc11g011590.2 3 3 13 4 18 2 11 6 3 0 6 3 4 1 0 GEM-like protein 6 (AHRD V3.3 *** A0A2G2ZGW1_CAPAN) AT5G23370 Solyc11g011600.3 0 0 0 1 0 3 0 0 0 0 0 0 1 0 0 GRAM domain-containing protein (AHRD V3.3 *-* A0A2U1LPW0_ARTAN) Solyc11g011610.2 624 494 270 446 295 306 273 256 371 707 505 333 654 499 534 UPF0678 fatty acid-binding protein-like protein (AHRD V3.3 *** A0A2G2VDJ8_CAPBA) AT1G79260 Solyc11g011620.3 172 150 107 104 39 56 37 44 81 100 205 88 175 100 169 UPF0678 fatty acid-binding protein-like protein (AHRD V3.3 *** A0A2G2VDJ8_CAPBA) AT1G79260 Solyc11g011630.3 2 32 4 36 12 30 21 20 18 11 31 2 2 7 3 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G2Y5L8_CAPAN) AT1G29460 Solyc11g011640.1 2 0 0 4 0 0 3 0 4 2 5 0 0 0 0 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G3B0T7_CAPCH) AT1G29460 Solyc11g011650.1 0 4 0 4 0 0 0 0 0 0 8 0 0 0 0 Auxin-responsive protein SAUR24 (AHRD V3.3 *** A0A1U8FJX4_CAPAN) AT2G21210 Solyc11g011660.1 0 5 0 6 0 3 1 0 3 4 10 0 0 2 0 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G2Y5L8_CAPAN) AT1G29460 Solyc11g011690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G3B0T7_CAPCH) AT1G29460 Solyc11g011680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR24 (AHRD V3.3 *** A0A1U8FJX4_CAPAN) AT2G21210 Solyc11g011670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G2Y5L8_CAPAN) AT1G29460 Solyc11g011673.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G2Y5L8_CAPAN) AT1G29460 Solyc11g011677.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR24 (AHRD V3.3 *** A0A1U8FJX4_CAPAN) AT2G21210 Solyc11g011710.1 0 10 0 23 0 0 0 0 12 8 0 0 0 0 0 Small auxin up-regulated RNA95 AT1G29460 Solyc11g011720.1 0 0 0 8 0 0 0 0 3 0 0 0 0 0 0 Auxin-responsive protein SAUR24 (AHRD V3.3 *** A0A1U8FJX4_CAPAN) AT2G21210 Solyc11g011730.1 0 7 5 7 0 0 0 0 9 7 0 0 0 0 0 Auxin-responsive protein SAUR65 (AHRD V3.3 *** A0A2G3B0T7_CAPCH) AT1G29460 Solyc11g011740.1 7 25 18 21 0 0 2 1 31 14 11 24 44 1 13 Ethylene-responsive transcription factor (AHRD V3.3 *** F1DGA5_COFAR) Solyc11g011750.1 0 0 0 2 0 0 3 1 3 0 0 0 0 0 0 Ethylene-responsive transcription factor 1B (AHRD V3.3 *** A0A2G2Y507_CAPAN) Solyc11g011755.1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc11g011760.3 1258 714 675 782 572 487 416 504 621 765 606 618 752 906 1344 voltage-dependent L-type calcium channel subunit (AHRD V3.3 *** AT5G16550.1) AT5G16550 Solyc11g011770.3 459 568 442 741 637 647 641 612 555 472 413 687 386 560 371 Homeodomain-like superfamily protein (AHRD V3.3 *-* A0A2U1PJR7_ARTAN) AT5G16560 Solyc11g011780.3 379 261 202 238 43 59 41 62 230 381 159 100 629 247 288 60S ribosomal export protein NMD3 (AHRD V3.3 *** A0A2G2VDP4_CAPBA) AT2G03820 Solyc11g011790.3 7 9 15 5 1 6 4 3 5 2 18 0 1 3 2 importin-5-like (AHRD V3.3 *-* A0A2I4FSB4_9ROSI) Solyc11g011800.3 7 4 0 1 0 2 2 1 0 5 1 1 0 3 3 importin-5-like (AHRD V3.3 *-* A0A2I4FSB4_9ROSI) Solyc11g011820.3 10 0 9 1 0 3 6 0 1 2 0 0 3 5 0 Oxidoreductase (AHRD V3.3 *-* A0A200R904_9MAGN) Solyc11g011840.2 696 417 310 457 503 449 415 411 475 655 360 477 457 423 426 Oxidoreductase (AHRD V3.3 *** A0A200R904_9MAGN) Solyc11g011850.2 1018 863 968 840 660 709 650 638 852 758 837 686 739 785 888 glycosyltransferase AT4G36890 Solyc11g011860.1 26 36 40 43 22 30 25 16 45 17 46 52 20 50 25 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VDJ9_CAPBA) AT3G14330 Solyc11g011870.3 84 17 12 38 0 0 0 0 2 2 9 0 35 58 40 Protein kinase, putative, expressed (AHRD V3.3 *** D8L9R5_WHEAT) Solyc11g011880.2 63 47 35 81 1 8 4 4 25 6 78 2 54 136 115 cysteine-rich receptor-like protein kinase 2 (AHRD V3.3 *** A0A2I4FR69_9ROSI) Solyc11g011890.2 27 78 44 38 69 54 104 69 54 20 24 42 66 74 43 Zinc finger protein 1 (AHRD V3.3 *** A0A2G2VDH3_CAPBA) Solyc11g011900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 polyubiquitin-like (AHRD V3.3 *** A0A2I4HQE1_9ROSI) AT4G05230 Solyc11g011910.2 1890 1649 1393 1478 1438 1496 1429 1596 1548 1999 1159 1661 2106 1757 1292 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G2Y517_CAPAN) AT1G14670 Solyc11g011920.2 3765 1915 3250 2764 999 871 820 776 2736 2876 3254 1209 2955 3288 5920 Glutamate decarboxylase (AHRD V3.3 *** B1Q3F1_SOLLC) AT5G17330 Solyc11g011930.3 606 921 810 873 998 1080 1026 1185 929 911 839 1016 964 928 765 Isocitrate dehydrogenase [NADP] (AHRD V3.3 *** A0A2G2VDF5_CAPBA) AT1G65930 Solyc11g011940.3 6 0 4 1 0 0 1 0 3 3 0 0 5 3 12 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc11g011960.2 4016 6103 4479 4988 5530 4390 4424 6030 6594 6287 4303 5745 5763 5530 5725 UTP--glucose-1-phosphate uridylyltransferase (AHRD V3.3 *** Q5F1U6_SOLTU) AT3G03250 Solyc11g011970.2 376 500 339 676 505 553 551 416 397 409 420 441 477 466 364 Protein-tyrosine phosphatase (AHRD V3.3 *** A0A200RBI0_9MAGN) Solyc11g011980.3 339 498 402 671 483 471 526 388 742 358 380 670 343 341 470 WD40 repeat (AHRD V3.3 *** A0A200RBE1_9MAGN) Solyc11g011990.2 356 242 412 449 191 217 220 176 311 301 481 311 354 431 492 plastid terminal oxidase AT4G22260 Solyc11g012000.2 499 224 93 171 65 87 85 73 159 177 95 105 241 170 230 Transmembrane protein, putative (DUF3537) (AHRD V3.3 *** A0A1P8B952_ARATH) Solyc11g012010.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RPM1-interacting protein 4-like (AHRD V3.3 *** A0A2I4DKC0_9ROSI) Solyc11g012020.2 108 804 624 818 1546 1330 1330 1779 824 569 685 1187 272 530 410 EH domain-containing protein 1 (AHRD V3.3 *** A0A1U8EYQ8_CAPAN) Solyc11g012030.2 0 3 0 0 0 0 1 0 0 0 1 0 0 0 0 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A2G3B012_CAPCH) AT3G24330 Solyc11g012040.2 162 148 179 173 182 206 165 229 278 282 182 248 171 130 231 Ubiquitin-specific protease family C19 protein (AHRD V3.3 *** A0A2K3NKS0_TRIPR) AT4G22290 Solyc11g012050.1 142 111 135 155 163 152 154 119 111 117 130 124 147 114 140 MAP kinase kinase kinase 81 AT1G62400 Solyc11g012060.2 1852 2271 1497 2067 2807 2296 2011 3665 1646 2245 1302 2430 2353 1839 928 hypothetical protein (AHRD V3.3 *-* AT1G12020.1) AT1G12020 Solyc11g012070.3 251 401 476 363 524 422 383 516 453 401 361 430 532 479 296 Phospholipase/carboxylesterase/thioesterase (AHRD V3.3 *** A0A200RBD1_9MAGN) AT4G22300 Solyc11g012080.2 573 934 1219 973 1410 1260 1383 1332 1165 839 1359 1091 1032 983 987 Mitochondrial pyruvate carrier (AHRD V3.3 *** A0A200RBJ0_9MAGN) AT4G22310 Solyc11g012090.2 107 149 56 95 111 130 102 159 110 69 147 69 127 130 89 golgin family A protein (AHRD V3.3 *** AT4G22320.1) AT4G22320 Solyc11g012100.2 589 331 226 233 188 273 208 275 218 313 178 266 291 301 180 Phosphoribosylglycinamide formyltransferase (AHRD V3.3 *** A0A2U1PTP7_ARTAN) AT1G31220 Solyc11g012110.2 10902 23316 17967 12766 19608 15673 15144 21328 13030 12638 13897 16501 22088 19012 14149 60S ribosomal protein L6 (AHRD V3.3 *** A0A2G3B009_CAPCH) AT1G18540 Solyc11g012120.2 1 4 54 3 0 0 2 0 2 1 7 2 2 2 0 DUF506 domain-containing protein (AHRD V3.3 *** A0A1Q3BBB3_CEPFO) AT1G12030 Solyc11g012130.2 38 538 504 476 681 700 524 519 1149 742 951 1451 462 857 323 Early nodulin-like protein 2-like (AHRD V3.3 *** A0A2K3MQQ9_TRIPR) Solyc11g012140.2 4583 4295 3632 3403 3322 3402 3522 3844 3678 3640 2788 3435 3900 3918 4170 Isoleucine--tRNA ligase, cytoplasmic (AHRD V3.3 *** A0A2G2VDD1_CAPBA) AT4G10320 Solyc11g012150.3 1115 1084 793 917 887 934 936 911 1361 806 937 887 1127 1226 1174 Transcription initiation factor IIF subunit alpha (AHRD V3.3 *** A0A2G2VDD5_CAPBA) AT4G12610 Solyc11g012160.2 1040 1119 1138 1221 1033 1023 1150 1005 1445 1289 1146 1182 1258 1283 1050 Fumarylacetoacetase (AHRD V3.3 *** A0A2G3AZK7_CAPCH) AT1G12050 Solyc11g012170.1 0 2 0 11 6 8 2 4 2 3 22 3 0 0 20 Pollen Ole e 1 allergen and extensin family protein (AHRD V3.3 *** Q58FY6_ARATH) AT5G47635 Solyc11g012180.2 244 323 477 450 657 669 698 536 359 260 395 440 423 442 481 Acyl carrier protein (AHRD V3.3 *** A0A1U8F8J4_CAPAN) AT5G47630 Solyc11g012190.3 62 106 149 124 111 168 166 145 152 112 181 119 156 139 192 Mannan endo-1,4-beta-mannosidase 6 (AHRD V3.3 *** A0A1U8F5H7_CAPAN) Solyc11g012195.1 77 95 62 49 54 77 80 65 47 25 58 58 92 61 127 DNA-directed RNA polymerase (AHRD V3.3 *** A0A1Y1IL49_KLENI) Solyc11g012200.3 7 27 10 32 30 21 26 39 26 12 13 22 16 13 23 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1LYZ9_ARTAN) Solyc11g012210.1 0 0 0 0 0 0 0 0 4 3 0 0 2 1 0 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1LYZ9_ARTAN) Solyc11g012220.1 52 194 65 188 154 135 94 154 117 114 94 175 99 76 34 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1LYZ9_ARTAN) Solyc11g012230.3 2 8 21 35 20 17 10 24 7 8 9 38 11 18 23 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1LYZ9_ARTAN) Solyc11g012240.1 12 94 25 84 41 31 33 46 110 99 78 118 69 63 48 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1LYZ9_ARTAN) Solyc11g012250.1 2 2 1 1 11 2 0 0 4 3 0 5 4 4 2 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1LYZ9_ARTAN) Solyc11g012260.3 221 224 97 207 138 180 110 109 171 233 263 153 209 199 199 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *-* A0A2U1LYZ9_ARTAN) AT3G51970 Solyc11g012270.2 523 336 417 346 404 544 455 374 388 411 336 426 306 432 313 Rho GDP-dissociation inhibitor 1 (AHRD V3.3 *** A0A1U8EW97_CAPAN) AT3G07880 Solyc11g012280.2 1378 1260 1030 946 952 1041 1056 831 702 899 1057 843 1082 1091 1059 sulfate adenylyltransferase subunit (AHRD V3.3 *** AT5G20130.2) AT5G20130 Solyc11g012290.2 4827 2616 1812 2506 2542 2052 1788 2693 2234 3472 2221 2705 1745 1964 1880 SWIB domain-containing protein (AHRD V3.3 *-* A0A1Q3D4Q9_CEPFO) AT4G22360 Solyc11g012300.1 3 26 4 26 16 7 8 3 5 18 10 9 3 5 20 transmembrane protein (AHRD V3.3 *-* AT4G22370.2) Solyc11g012310.1 4 4 14 7 7 8 1 3 11 8 5 3 12 6 14 transmembrane protein (AHRD V3.3 *-* AT4G22370.2) AT4G22370 Solyc11g012320.3 97 667 255 754 1085 630 628 1163 239 396 180 212 386 272 1318 induced stolen tip protein TUB8-like isoform 1 (AHRD V3.3 *-* NP_001332794.1) Solyc11g012325.1 12 75 41 60 61 67 44 75 18 15 19 16 46 20 108 Unknown protein Solyc11g012330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *-* A0A1B1LUK2_VITPS) Solyc11g012340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase UPL5 (AHRD V3.3 *** A0A2G2WUZ6_CAPBA) Solyc11g012350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g012360.2 3580 2228 162 2539 1134 998 1168 1118 1211 910 215 309 1949 458 878 Tonoplast dicarboxylate transporter (AHRD V3.3 *** A0A2G3AZI6_CAPCH) AT5G47560 Solyc11g012370.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 cysteine proteinase inhibitor A (AHRD V3.3 -** XP_002987167.2) Solyc11g012380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine proteinase inhibitor (AHRD V3.3 *** A0A2G3AQ34_CAPCH) Solyc11g012385.1 239 124 128 151 41 50 38 23 174 234 135 76 235 127 227 Cysteine proteinase inhibitor (AHRD V3.3 *** A0A2G2Y4E8_CAPAN) Solyc11g012400.2 884 1174 1124 1068 1330 1333 1413 1197 1257 1042 974 966 1440 1239 1044 Mo25-like (AHRD V3.3 *** A0A200QFJ7_9MAGN) AT5G47540 Solyc11g012410.2 42 141 131 181 116 137 139 114 173 83 149 86 159 180 176 myo-inositol monophosphatase 3 AT3G02870 Solyc11g012420.2 5 4 0 0 0 0 3 1 0 0 3 0 0 2 0 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A2G2VD03_CAPBA) AT5G47530 Solyc11g012440.1 4551 2830 2221 2350 2862 2382 2471 2607 2746 5384 2159 2609 1882 2018 2450 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2I0XD88_9ASPA) AT4G16490 Solyc11g012450.2 510 275 295 274 122 130 116 145 192 244 201 291 346 310 399 Inositol transporter 4 AT4G16480 Solyc11g012460.3 1829 1139 1262 1021 925 1092 897 888 873 1237 858 1113 776 992 1086 Ras-related protein RABA5a (AHRD V3.3 *** A0A2G2Y4I2_CAPAN) AT5G47520 Solyc11g012470.2 687 532 615 696 647 709 620 562 565 497 629 525 475 520 631 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4JFN7_ARATH) Solyc11g012480.3 336 413 414 307 361 303 347 311 296 283 260 392 386 406 251 Thymidine kinase (AHRD V3.3 *** A0A1U8EY32_CAPAN) AT5G23070 Solyc11g012490.2 8 10 1 3 14 16 13 9 13 17 20 2 15 15 5 Unknown protein Solyc11g012500.3 2 0 0 1 3 2 1 0 0 1 6 0 0 3 11 Unknown protein Solyc11g012510.3 513 373 651 411 321 217 220 224 453 746 1089 498 426 450 557 GRAS1 Solyc11g012520.1 87 241 393 507 572 445 341 415 292 160 429 317 480 318 336 hypothetical protein (AHRD V3.3 --* AT4G16447.1) Solyc11g012530.3 8 14 9 5 9 9 7 8 6 6 14 15 5 15 4 F-box protein CPR1 isoform X1 (AHRD V3.3 *-* XP_004250283.2) Solyc11g012540.2 294 185 166 165 136 191 176 108 95 98 180 135 138 141 225 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G3B5C9_CAPCH) Solyc11g012550.3 1030 722 1079 1010 671 766 909 497 616 504 891 632 769 814 1274 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G3B5C9_CAPCH) Solyc11g012560.3 80 90 87 113 104 164 140 121 65 105 68 83 72 70 125 F-box protein CPR1 (AHRD V3.3 *-* CPR1_ARATH) Solyc11g012570.3 82 112 138 105 183 130 143 152 131 89 56 115 142 154 123 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1PDA5_ARTAN) AT3G51320 Solyc11g012580.2 24 44 54 61 28 22 33 21 29 55 38 19 20 16 18 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *** F4IFD7_ARATH) Solyc11g012590.3 284 153 429 349 32 44 39 28 106 166 256 94 97 277 1020 CASP-like protein (AHRD V3.3 *** A0A328E4A6_9ASTE) AT2G35760 Solyc11g012600.3 15 1 16 3 3 1 0 0 3 7 14 1 2 2 9 Ribosome associated membrane protein RAMP4 (AHRD V3.3 -** AT1G27350.1) Solyc11g012610.2 164 613 520 625 855 872 793 1027 498 423 504 651 266 532 313 structural maintenance of chromosomes protein (AHRD V3.3 *** AT4G17240.1) AT4G17240 Solyc11g012620.2 204 154 131 182 145 188 107 116 119 108 239 113 136 141 212 Agenet-like domain-containing protein (AHRD V3.3 *** A0A118K161_CYNCS) Solyc11g150101.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zf-BED domain-containing protein (AHRD V3.3 *-* A0A1Q3BAX0_CEPFO) Solyc11g012640.1 35 130 87 101 86 101 57 75 97 65 71 93 136 119 95 transmembrane protein (AHRD V3.3 *-* AT4G16410.1) AT4G16410 Solyc11g012645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein TAPETUM DETERMINANT 1-like (AHRD V3.3 *** A0A2I4H4K2_9ROSI) Solyc11g012660.2 0 0 0 0 0 0 0 0 0 1 1 0 0 1 24 Microtubule-associated protein 70 (AHRD V3.3 *** A0A200RBU6_9MAGN) AT4G17220 Solyc11g012665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g012670.1 223 634 287 351 416 338 381 464 412 223 205 340 464 428 421 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1LWS3_ARTAN) AT4G16390 Solyc11g012680.3 3373 1507 488 1848 750 758 851 920 1205 1614 1175 664 1755 861 1313 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* B3H4A8_ARATH) AT4G16380 Solyc11g012690.3 21 16 31 41 0 3 1 3 9 6 20 0 57 37 89 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *** A0A2R6RB34_ACTCH) Solyc11g012700.2 909 1131 826 1302 462 366 417 407 1326 1126 575 610 1371 1101 1106 Oligopeptide transporter (AHRD V3.3 *** A0A200RBP6_9MAGN) AT4G16370 Solyc11g012705.2 13 8 1 7 1 3 2 3 3 7 0 1 10 14 5 Pollen Ole e 1 allergen and extensin family protein (AHRD V3.3 *** Q58FY6_ARATH) AT2G40113 Solyc11g012710.2 123 118 169 175 134 114 121 145 116 126 156 130 161 141 110 SNF1-related protein kinase regulatory subunit beta-2 (AHRD V3.3 *** A0A1U8F370_CAPAN) AT4G16360 Solyc11g012720.2 670 518 653 472 512 612 520 556 500 546 464 465 497 453 459 Trihelix transcription factor (AHRD V3.3 *-* B0EW03_SOYBN) AT5G47660 Solyc11g012730.3 473 761 802 868 983 976 900 722 688 515 766 700 888 808 842 Thioredoxin domain (AHRD V3.3 *** A0A200PS21_9MAGN) AT2G18990 Solyc11g012740.2 11138 6566 6598 7412 6346 5692 5786 5543 4798 8839 6126 7070 5811 6436 5922 regulation of nuclear pre-mRNA domain-containing protein 1B-like (AHRD V3.3 *** A0A2I4GPN9_9ROSI) Solyc11g012760.2 188 412 367 287 493 500 444 343 399 154 266 323 531 430 326 tRNA (Guanine(9)-N1)-methyltransferase (AHRD V3.3 *** A0A1J3G9U5_NOCCA) AT5G47680 Solyc11g012770.2 4778 3295 2597 2449 2744 3029 2873 3427 3796 3390 2651 3086 2526 2999 2509 Sister chromatid cohesion PDS5-like protein (AHRD V3.3 *** A0A2K3P064_TRIPR) AT5G47690 Solyc11g012780.3 180 128 169 151 118 94 123 118 105 184 208 115 187 144 162 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LMA8_ARTAN) Solyc11g012790.2 1202 1012 975 1259 1283 1100 1234 1203 1293 1407 996 912 1045 750 1245 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A2U1NTZ9_ARTAN) Solyc11g012810.2 1252 649 467 560 433 443 431 389 509 460 354 458 516 683 543 protein ANTI-SILENCING 1-like (AHRD V3.3 *** A0A2I4DFE9_9ROSI) AT5G11470 Solyc11g012815.1 0 0 0 0 2 0 2 1 0 0 0 2 0 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) Solyc11g012820.2 1017 754 753 643 986 810 843 934 674 662 462 772 701 633 476 Replication factor C subunit 4 (AHRD V3.3 *** A0A2G2WYH3_CAPBA) AT1G21690 Solyc11g012830.3 1428 781 613 793 633 706 647 674 767 1064 654 836 579 578 812 F-box protein 7 (AHRD V3.3 *** A0A1U8GFR7_CAPAN) AT1G21760 Solyc11g012840.2 794 433 384 360 388 359 361 342 438 586 540 414 471 414 433 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G3CLU5_CAPCH) AT1G21780 Solyc11g012850.2 2739 2152 445 2274 2899 3100 3262 2550 1182 1999 564 1223 1310 670 904 Chlorophyllide a oxygenase, chloroplastic (AHRD V3.3 *** A0A2G2Z9Y9_CAPAN) AT1G44446 Solyc11g012860.3 181 713 810 755 1187 1417 1236 1180 841 462 752 880 513 745 713 coiled-coil protein AT3G05270 Solyc11g012870.2 1149 6019 3274 4064 8031 7595 7345 9228 3952 3426 2868 6212 3479 4172 2104 LysM domain-containing GPI-anchored protein 2 (AHRD V3.3 *** A0A2G2WX98_CAPBA) AT1G21880 Solyc11g012880.2 62 203 205 292 429 499 446 354 177 172 232 327 98 217 283 EamA-like transporter family protein (AHRD V3.3 *** A0A2U1L2E6_ARTAN) Solyc11g012890.2 358 442 627 595 666 741 825 479 399 309 643 486 459 541 652 hypothetical protein (AHRD V3.3 *** AT1G48200.1) AT1G48200 Solyc11g012900.3 3364 2130 2166 1816 1293 1429 1524 1094 1571 1784 2024 1499 2402 1924 2373 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** F4JG04_ARATH) AT4G08320 Solyc11g012910.2 20 104 187 137 220 157 170 194 147 103 112 117 67 105 136 Gamma-glutamylcyclotransferase (AHRD V3.3 *** A0A2G2ZMV7_CAPAN) AT1G44790 Solyc11g012920.3 1494 1482 959 868 1052 983 1074 1116 1000 808 806 1057 1369 1361 908 translation initiation factor (AHRD V3.3 *** AT1G44780.2) AT4G08310 Solyc11g012923.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MZL8_TRIPR) ATMG00240 Solyc11g012927.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g012930.2 506 344 569 1135 134 95 50 73 144 312 108 44 321 160 318 WAT1-related protein (AHRD V3.3 *** K4D697_SOLLC) AT4G08300 Solyc11g012940.2 191 220 194 253 237 250 317 270 178 194 141 209 195 167 284 Glutaredoxin-like protein (AHRD V3.3 *** A0A2G3CLJ0_CAPCH) AT4G08280 Solyc11g012950.2 45 38 78 52 43 65 38 31 22 20 76 25 25 44 95 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1KYA3_ARTAN) AT1G60360 Solyc11g012960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g012970.2 1730 1321 1245 2909 1285 1164 1217 1625 1436 2675 1427 1636 1571 1463 1286 Peptidase M20/M25/M40 family protein (AHRD V3.3 *** F4JTK8_ARATH) AT1G44820 Solyc11g012980.1 99 50 147 56 3 9 19 4 62 79 285 32 69 39 75 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3CLK5_CAPCH) AT1G44830 Solyc11g012990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *** A0A2U1NNX3_ARTAN) Solyc11g012995.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc11g013000.2 277 400 317 248 304 343 319 360 325 317 409 341 625 387 224 Transmembrane emp24 domain-containing protein p24delta3 (AHRD V3.3 *** A0A1U8GFP4_CAPAN) Solyc11g013010.2 465 380 509 391 361 538 493 435 346 390 376 434 319 327 511 Phosphatidylinositol-4-phosphate 5-kinase, putative (AHRD V3.3 *** Q8LAR3_ARATH) AT1G21920 Solyc11g013020.2 975 882 1088 873 1127 1174 978 900 662 899 1123 848 991 768 1201 histone-lysine N-methyltransferase (AHRD V3.3 *** AT4G08240.2) AT4G08240 Solyc11g013030.2 651 655 606 594 566 734 657 665 678 602 604 539 719 735 782 DIS3-like exonuclease 2 (AHRD V3.3 *** A0A2G2WY12_CAPBA) AT1G77680 Solyc11g013060.1 75 85 27 51 73 55 65 74 42 76 22 97 42 60 41 ALBINO3-like protein 2, chloroplastic (AHRD V3.3 *-* A0A1U8G0A5_CAPAN) Solyc11g013080.3 136 113 105 155 111 138 151 65 109 90 149 78 110 108 188 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein (AHRD V3.3 *-* A0A1I9LM69_ARATH) AT1G65080 Solyc11g013090.2 94 116 97 120 111 112 114 91 83 79 136 111 78 99 109 Penicillin-binding protein, 1A family (AHRD V3.3 *-* B2IXM2_NOSP7) Solyc11g013100.2 716 798 932 955 984 915 837 762 803 692 860 694 1039 868 933 Glycine-rich protein (AHRD V3.3 *** Q8VY68_ARATH) AT4G08230 Solyc11g013110.2 4955 6058 3468 6184 2872 2627 2835 1899 7447 5441 5081 5389 5017 4591 5450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G49390.1) AT5G08640 Solyc11g013120.2 247 218 333 284 203 222 239 146 220 254 354 233 304 239 290 Camphor resistance CrcB family protein (AHRD V3.3 *** Q8RYE2_ARATH) AT2G41705 Solyc11g013130.2 3778 3889 4398 7557 2776 2519 2586 2638 3446 7082 4596 4067 4270 3416 4678 Unknown protein Solyc11g013150.1 70 76 73 76 86 117 68 86 117 37 100 81 80 83 102 Nodulation-signaling pathway 2 protein (AHRD V3.3 *** A0A2G3CLP6_CAPCH) AT4G08250 Solyc11g013170.2 1294 3438 2114 2270 3219 2927 2711 4078 3493 3457 2506 4097 3578 3341 1906 Aminotransferase (AHRD V3.3 *** A0A200QIS8_9MAGN) AT1G77670 Solyc11g013180.2 1158 1650 1684 1227 1578 1553 1532 1571 1779 1247 1370 1640 1239 1547 1424 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *** K4D6C2_SOLLC) AT1G77740 Solyc11g013190.2 1000 690 964 633 464 532 553 476 700 690 812 480 767 727 973 Oxysterol-binding protein (AHRD V3.3 *** A0A200QNE7_9MAGN) AT4G08180 Solyc11g013200.2 115 163 134 140 106 139 130 188 130 116 80 160 159 104 103 Biotin--protein ligase 1, chloroplastic (AHRD V3.3 *** A0A2G3B0T4_CAPCH) AT1G37150 Solyc11g013210.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase MAK (AHRD V3.3 *-* A0A2G2XMD0_CAPBA) Solyc11g013215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 purine permease 1-like (AHRD V3.3 *-* A0A1S4AAJ7_TOBAC) Solyc11g013220.2 45 130 221 196 278 301 220 298 103 103 109 156 110 161 35 C2H2-like zinc finger protein (AHRD V3.3 *** A0A2U1KP34_ARTAN) Solyc11g013240.3 306 713 771 790 1207 1217 1259 1367 606 636 643 787 497 668 388 serine/threonine-protein kinase mph1 isoform X4 (AHRD V3.3 *** A0A2I4H5E5_9ROSI) AT1G77720 Solyc11g013230.1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g013250.1 55 20 0 0 0 1 0 0 6 17 0 0 33 18 7 C2 calcium-dependent membrane targeting (AHRD V3.3 *** A0A2U1MZ85_ARTAN) AT3G05440 Solyc11g013260.3 2227 2544 1973 2144 1993 2108 2039 2182 1838 2241 1714 2125 3478 2690 2048 Prohibitin (AHRD V3.3 *** O04361_TOBAC) AT5G40770 Solyc11g013270.2 136 456 341 402 493 395 486 489 420 280 372 410 358 297 284 O-fucosyltransferase (AHRD V3.3 *** A0A2P5CFH3_PARAD) AT1G38131 Solyc11g013280.1 2273 1825 1558 1633 1740 1631 1849 2008 1676 1931 1430 1804 1410 1567 1563 transcription activator (AHRD V3.3 *** AT5G18410.2) AT5G18410 Solyc11g013300.2 41 47 145 104 109 78 67 51 68 60 146 52 35 53 70 Thaumatin-like protein (AHRD V3.3 *** A0A1J3EIZ2_NOCCA) AT1G77700 Solyc11g013310.2 238 227 114 167 50 47 59 35 145 117 185 85 152 170 261 Auxin transporter-like protein 3 (AHRD V3.3 *** A0A2G2ZP08_CAPAN) AT1G77690 Solyc11g013320.2 0 0 2 1 5 3 4 3 0 0 0 2 0 0 0 Rhomboid-like protein (AHRD V3.3 *** A0A1U8GP08_CAPAN) AT1G77860 Solyc11g013330.3 63 51 83 76 35 50 49 42 47 10 80 49 55 94 117 BPS1-like protein (AHRD V3.3 *** AT1G22030.1) Solyc11g013350.1 46 67 101 114 65 81 101 39 67 43 122 40 69 51 129 Unknown protein Solyc11g013353.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A1P8B5N0_ARATH) Solyc11g013357.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin 20 oxidase 2 (AHRD V3.3 *-* A0A2H4X2V6_CAMSI) Solyc11g013370.3 1061 1038 794 758 1029 942 918 1132 1217 834 753 972 1051 982 912 E3 ubiquitin protein ligase (AHRD V3.3 *** A0A2G2ZNJ5_CAPAN) AT2G44950 Solyc11g013380.1 47 28 24 31 22 45 35 25 26 27 37 20 31 28 56 GrpE protein homolog (AHRD V3.3 *-* A0A2G2V6J1_CAPBA) Solyc11g013390.3 108 67 48 69 31 34 55 29 49 53 58 39 38 68 76 GrpE protein homolog (AHRD V3.3 *-* A0A2G2V6J1_CAPBA) Solyc11g150102.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4EGG2_9ROSI) Solyc11g150103.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HAT family dimerization domain-containing protein (AHRD V3.3 *-* A0A2K3L630_TRIPR) Solyc11g013400.3 850 764 761 668 703 682 619 689 669 659 557 656 897 784 905 Chromatin structure-remodeling complex protein BSH (AHRD V3.3 *** A0A1U8GF00_CAPAN) AT3G17590 Solyc11g013410.2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Chromatin structure-remodeling complex protein BSH (AHRD V3.3 *-* A0A1U8GF00_CAPAN) Solyc11g013420.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g013440.2 1071 1739 1671 1502 1591 1591 1595 1604 1072 1349 1471 1289 2068 1712 1538 Eukaryotic translation initiation factor 3 subunit F (AHRD V3.3 *** A0A1U8GMA9_CAPAN) AT2G39990 Solyc11g013450.2 24 45 57 33 117 104 96 75 55 28 71 54 48 53 83 hypothetical protein (AHRD V3.3 *** AT1G21830.1) AT1G21830 Solyc11g013460.2 258 348 399 378 278 382 451 344 289 279 379 329 247 305 470 Dephospho-CoA kinase (AHRD V3.3 *** A0A1U8FC11_CAPAN) AT2G27490 Solyc11g013470.1 140 126 119 94 150 148 125 124 82 95 84 120 92 118 125 Auxin response factor (AHRD V3.3 *-* E5LMG0_SOLLC) Solyc11g013480.3 45 35 10 31 45 53 30 47 28 30 30 39 32 15 30 Auxin Response Factor 17 Solyc11g013490.2 696 816 841 823 758 1026 821 867 757 599 867 648 934 887 867 Hexosyltransferase (AHRD V3.3 *** A0A1U8GEW3_CAPAN) AT1G77810 Solyc11g013500.1 93 160 173 224 319 287 222 281 198 148 197 198 174 259 234 myotubularin-like protein (AHRD V3.3 *** AT1G36940.1) AT1G36940 Solyc11g013520.3 3191 1676 1526 1314 1245 1290 1285 1399 1405 2049 1626 1687 1488 1491 1499 Histone acetyltransferase (AHRD V3.3 *** A0A2G3CMD1_CAPCH) AT5G64610 Solyc11g013530.3 3377 2405 2380 2379 1689 2206 2132 1791 2088 2261 2330 1873 2054 2423 2811 PHD finger family protein (AHRD V3.3 *** A0A1P8APU9_ARATH) AT1G77800 Solyc11g013550.2 129 107 125 172 114 140 154 119 99 150 250 145 217 134 201 transmembrane protein 50A (AHRD V3.3 *** A0A2I4GBG7_9ROSI) AT1G36980 Solyc11g013560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Transcription factor DIVARICATA (AHRD V3.3 *-* A0A2G3A4M6_CAPAN) Solyc11g013570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** D7U0Q4_VITVI) Solyc11g013580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Winged-helix DNA-binding transcription factor family protein (AHRD V3.3 *-* G5DVX9_SILLA) Solyc11g013590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HMG-Y-related protein A (AHRD V3.3 *-* A0A2K3PCU7_TRIPR) Solyc11g013600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Winged-helix DNA-binding transcription factor family protein (AHRD V3.3 *-* G5DVX8_SILLA) Solyc11g013610.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein 4 (AHRD V3.3 *-* A0A2G2XSF7_CAPBA) Solyc11g013620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor DIVARICATA (AHRD V3.3 *-* A0A2G3A4M6_CAPAN) Solyc11g013630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Winged-helix DNA-binding transcription factor family protein (AHRD V3.3 *-* G5DVX9_SILLA) Solyc11g013633.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 katanin p60 ATPase-containing subunit A1-like (AHRD V3.3 *-* XP_019066437.1) Solyc11g013635.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** A0A0A0KBZ7_CUCSA) Solyc11g013637.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *-* W1NMD1_AMBTC) Solyc11g013660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Transmembrane 50A-like protein (AHRD V3.3 *-* Q949Z8_ARATH) Solyc11g013670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HMG-Y-related protein A-like (AHRD V3.3 *** XP_010312913.1) Solyc11g013680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HMG-Y-related protein A (AHRD V3.3 *-* A0A2K3PCU7_TRIPR) Solyc11g013700.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** A0A2I4F6V5_9ROSI) Solyc11g013710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HMG-Y-related protein A-like (AHRD V3.3 *** XP_010312913.1) Solyc11g013720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HMG-Y-related protein A-like (AHRD V3.3 *** XP_010312913.1) Solyc11g013730.3 0 1 1 2 0 0 2 1 2 2 0 1 0 3 4 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *-* Q37700_9LAMI) Solyc11g013740.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Guanylate-binding family protein (AHRD V3.3 *-* A0A2U1PP48_ARTAN) Solyc11g013745.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-binding tetratricopeptide family protein (AHRD V3.3 *-* A0A1Y1ISM6_KLENI) Solyc11g013750.3 729 448 646 517 396 482 458 304 438 543 746 385 371 499 989 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* A0A1P8BBG0_ARATH) Solyc11g013760.2 883 753 834 573 593 665 623 533 551 594 597 523 702 817 633 mediator of RNA polymerase II transcription subunit-like protein (AHRD V3.3 *** AT4G08510.2) AT1G36990 Solyc11g013770.2 181 165 132 228 118 175 186 141 123 106 107 131 151 167 169 Unknown protein Solyc11g013780.1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *-* R9TP27_9MARC) Solyc11g013810.3 4255 2114 323 2677 135 193 107 281 1602 1401 272 216 4618 623 664 Nitrate reductase (AHRD V3.3 *** Q8LT13_SOLTU) AT1G37130 Solyc11g013820.2 16 12 17 18 15 26 37 35 21 31 4 20 29 46 56 1-phosphatidylinositol-3-phosphate 5-kinase-like protein (AHRD V3.3 *-* A0A2K3NR77_TRIPR) Solyc11g013830.2 255 298 265 343 267 361 384 249 295 246 284 212 242 191 449 1-phosphatidylinositol-3-phosphate 5-kinase fab1d-like protein (AHRD V3.3 *** A0A2K3NPE5_TRIPR) AT1G34260 Solyc11g013840.3 257 340 252 337 384 345 284 358 250 256 198 288 256 349 338 Exostosin family protein (AHRD V3.3 *** A0A2U1KYW8_ARTAN) AT1G34270 Solyc11g013850.2 120 168 231 143 237 197 203 186 203 166 152 199 263 229 153 PyrD (AHRD V3.3 *** AT1G71865.1) AT1G71865 Solyc11g013855.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc11g013860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *-* A0A2I0AU41_9ASPA) Solyc11g013870.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase At4g16230-like (AHRD V3.3 *** A0A1U8GK73_CAPAN) Solyc11g013880.1 733 540 618 568 376 375 414 361 510 757 645 464 773 575 676 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G2VBG8_CAPBA) AT1G34300 Solyc11g013890.1 152 193 101 228 233 183 215 223 201 183 152 175 175 122 255 F-box associated domain, type 1 (AHRD V3.3 *** A0A2U1K9Q2_ARTAN) Solyc11g015890.2 42 27 43 56 14 6 12 22 23 73 63 31 43 15 36 F-box domain-containing protein (AHRD V3.3 *** A0A2U1KDV8_ARTAN) Solyc11g016930.1 302 181 331 316 227 273 240 153 173 221 307 193 214 252 274 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *-* A0A061EED9_THECC) Solyc11g016910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit C (AHRD V3.3 *-* A0A0D3GXF4_9ORYZ) Solyc11g016920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit C (AHRD V3.3 *-* A0A0D3GXF4_9ORYZ) Solyc11g016940.2 371 344 347 439 337 487 427 362 260 307 409 357 347 340 381 magnesium transporter NIPA (DUF803) (AHRD V3.3 *** AT4G13800.8) Solyc11g016945.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3MSD0_TRIPR),Pfam:PF14223 AT5G48050 Solyc11g016970.2 44 82 204 113 104 132 108 159 38 72 60 100 44 55 121 Protein DETOXIFICATION (AHRD V3.3 *** A0A328D1S5_9ASTE) AT1G71870 Solyc11g016980.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 transcription initiation factor TFIID subunit (AHRD V3.3 *-* AT5G65540.1) Solyc11g016990.3 1521 909 786 782 784 925 895 798 627 635 886 656 834 887 951 Protein-tyrosine-phosphatase PTP1 (AHRD V3.3 *** A0A2G3CM37_CAPCH) AT1G71860 Solyc11g016993.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc11g016997.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein NSP-INTERACTING KINASE 1 (AHRD V3.3 *-* A0A2G2VH84_CAPBA) Solyc11g017000.2 815 574 524 372 364 401 319 406 365 600 481 402 724 519 445 DUF668 domain-containing protein/DUF3475 domain-containing protein (AHRD V3.3 *** A0A1Q3CI27_CEPFO) AT1G34320 Solyc11g017010.2 2394 1659 2333 1769 508 504 382 541 1401 3177 1310 620 2383 2423 3334 SlSUT1,Pfam:PF13347 AT1G22710 Solyc11g017040.2 1774 1606 1368 1493 1545 1499 1482 1797 1640 1846 1501 1729 1691 1577 1410 Peptidase C48 (AHRD V3.3 *** A0A200QIZ9_9MAGN) AT1G09730 Solyc11g017050.1 410 360 305 359 516 407 367 532 376 385 221 446 329 371 298 Mitochondrial transcription termination factor (AHRD V3.3 *** D8WKY3_TRITU) AT2G44020 Solyc11g017060.2 87 56 91 61 24 49 52 27 24 28 53 16 47 41 66 Unknown protein Solyc11g017070.2 1104 2586 1806 1444 1979 1843 1922 2100 1541 1142 1294 1504 2983 2335 1329 Eukaryotic translation initiation factor 3 subunit I (AHRD V3.3 *** A0A2U1LM52_ARTAN) AT2G46280 Solyc11g150104.1 0 0 6 0 0 7 0 0 0 0 0 0 1 0 0 Heat shock cognate 70 kDa protein 2 (AHRD V3.3 *-* A0A2G3CBI7_CAPCH) Solyc11g150105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc11g017100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor GRAS (AHRD V3.3 *** A0A2U1PKY8_ARTAN) Solyc11g017105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc11g017130.2 44 210 207 264 350 400 436 492 239 167 202 319 52 153 106 FHA domain-containing protein PS1 (AHRD V3.3 *** A0A2G3CMM6_CAPCH) AT1G34355 Solyc11g017140.3 1401 940 1330 1208 997 1091 1051 922 1273 1022 1633 1020 1181 1019 1395 Zinc finger protein (AHRD V3.3 *** A0A200QPB2_9MAGN) AT1G34370 Solyc11g017170.1 142 156 90 110 119 122 125 166 210 146 159 183 120 173 129 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A328CWN8_9ASTE) AT5G44240 Solyc11g017200.2 352 441 499 371 511 488 506 467 470 298 424 425 402 538 533 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** F4I2Z0_ARATH) AT1G22700 Solyc11g017210.3 1 2 0 0 0 0 1 0 6 2 0 0 0 0 3 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4EFP3_9ROSI) Solyc11g017230.2 132 146 133 187 150 192 195 114 125 165 204 93 115 227 180 DNA polymerase I (AHRD V3.3 *** B6U7X8_MAIZE) AT1G34380 Solyc11g017220.1 0 0 0 0 0 1 4 3 2 2 0 3 4 2 0 SNW domain-containing protein 1 (AHRD V3.3 *** A0A2G2YUR5_CAPAN) Solyc11g017240.3 215 205 339 268 219 167 161 141 217 275 287 147 362 310 322 chorismate mutase AT5G10870 Solyc11g017250.2 352 1284 975 1218 1655 1399 1429 1764 1158 905 824 1219 1526 1270 713 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (AHRD V3.3 *** A0A2G2WYT7_CAPBA) AT1G34430 Solyc11g017270.2 3001 1504 1397 725 314 258 228 244 724 1774 907 481 2362 1393 901 leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 (AHRD V3.3 *** A0A1U8GF47_CAPAN) AT1G34420 Solyc11g017280.2 226 109 32 43 0 1 0 5 15 65 40 0 210 160 87 leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 (AHRD V3.3 *** A0A1U8GF47_CAPAN) AT1G34420 Solyc11g150106.1 8 19 34 11 17 37 37 41 22 19 22 24 25 17 9 Unknown protein Solyc11g017290.1 42 29 16 16 25 41 29 38 34 19 8 60 30 31 20 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8GEG1_CAPAN) AT1G31430 Solyc11g017300.2 1881 1824 1777 1456 2029 1695 1778 1733 1561 1611 1570 1803 1698 1537 1447 JAB AT1G22920 Solyc11g017305.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 early nodulin-like protein 1 (AHRD V3.3 *** A0A2I4G5I0_9ROSI) Solyc11g017310.3 12 23 11 31 12 11 28 10 12 12 12 32 16 24 7 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A2G2WYH4_CAPBA) Solyc11g017320.3 1 3 3 1 0 3 6 3 3 2 0 1 3 0 0 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A1U8GEE4_CAPAN) Solyc11g017330.1 33 24 26 36 42 30 39 28 45 19 9 24 18 35 46 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A2G2WYH4_CAPBA) Solyc11g017340.1 3 8 11 1 14 4 6 9 12 3 6 7 4 23 8 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A1U8GEE4_CAPAN) Solyc11g017345.1 34 26 33 34 34 34 54 44 38 25 39 31 29 31 33 F-box/FBD/LRR-repeat protein (AHRD V3.3 *-* XP_010312830.1) Solyc11g017360.3 41 39 38 37 58 37 41 31 42 29 50 27 40 67 81 Transcription factor DIVARICATA-like (AHRD V3.3 *-* A0A2P6VGL2_9CHLO) Solyc11g017370.3 40 35 47 43 40 39 34 38 43 39 20 56 57 51 22 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2WYH4_CAPBA) AT3G22150 Solyc11g150107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 *-* XP_019069006.1) Solyc11g017377.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 *-* XP_019071502.1) Solyc11g017380.2 147 138 141 194 176 195 198 138 163 127 184 161 168 202 174 magnesium transporter NIPA (DUF803) (AHRD V3.3 *** AT4G13800.8) Solyc11g017390.2 0 13 18 9 0 0 1 0 3 9 23 6 9 1 21 hypothetical protein (AHRD V3.3 --* AT1G71910.2) AT1G71910 Solyc11g017400.2 53 50 65 55 34 38 70 40 47 45 67 58 55 49 73 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (AHRD V3.3 *** A0A2U1L212_ARTAN) AT3G58130 Solyc11g017410.1 23 28 89 71 40 21 37 18 42 35 74 21 27 23 63 protein BPS1, chloroplastic-like (AHRD V3.3 *** A0A2I4DT09_9ROSI) Solyc11g017420.2 532 753 907 910 775 883 965 792 980 591 796 623 713 856 810 Transmembrane protein (DUF616) (AHRD V3.3 *** Q9SST1_ARATH) AT4G09630 Solyc11g017430.3 190 134 205 159 121 169 150 143 151 122 208 116 156 209 138 Mitochondrial transcription termination factor family protein (AHRD V3.3 *-* AT4G09620.3) Solyc11g017440.3 13 32 34 50 8 15 11 12 24 20 22 14 14 7 37 Gibberellin regulated protein (AHRD V3.3 *-* A0A200PTJ5_9MAGN) AT1G22690 Solyc11g017450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2I4H9X6_9ROSI) Solyc11g017460.3 1394 866 955 857 702 883 804 800 981 1194 995 963 726 860 964 U-box domain-containing protein 13 (AHRD V3.3 *** A0A1J3H637_NOCCA) AT1G77460 Solyc11g017470.2 1813 1211 573 392 205 125 236 171 540 1563 932 376 1762 789 1065 NAC domain-containing protein (AHRD V3.3 *** A0A2K3N804_TRIPR) AT1G01720 Solyc11g017475.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 *** AT1G21722.1) AT1G21722 Solyc11g018470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 -** AT1G21722.1) AT1G21722 Solyc11g018490.3 0 0 0 2 0 0 7 0 1 0 0 0 0 0 0 Beta-galactosidase (AHRD V3.3 *** A0A2G2ZP46_CAPAN) AT1G77410 Solyc11g018500.3 47 364 534 774 820 967 915 797 362 245 421 660 57 385 278 Beta-galactosidase (AHRD V3.3 *** A0A2G2ZPF3_CAPAN) AT1G77410 Solyc11g018510.2 348 254 205 292 247 271 271 289 197 272 255 226 220 260 197 N-glycosylase/DNA lyase OGG1 (AHRD V3.3 *** A0A2G3AYU0_CAPCH) AT1G21710 Solyc11g018530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 root-specific metal transporter Solyc11g018550.4 221 399 422 409 510 400 457 478 420 346 310 401 343 405 346 ascorbate peroxidase 6 AT1G77490 Solyc11g018560.2 787 1081 928 866 1026 887 923 788 757 713 745 775 1491 1252 898 50S ribosomal protein L25 (AHRD V3.3 *** A0A1J3IB89_NOCCA) AT4G23620 Solyc11g018570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 thionin-like protein 2 (AHRD V3.3 -** XP_024036856.1) Solyc11g018580.2 2067 2086 3774 2534 2641 2640 2540 2081 2194 1806 2914 1823 1906 1909 3125 Long chain acyl-CoA synthetase (AHRD V3.3 *** Q5W6W7_ORYSJ) AT1G77590 Solyc11g018590.1 0 1 2 5 0 2 1 0 4 8 0 2 5 2 3 Subtilisin-like protease SBT3.3 (AHRD V3.3 *** A0A1J3HFE0_NOCCA) Solyc11g018600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PL19_ARTAN),Pfam:PF13561 AT3G42960 Solyc11g018610.2 462 534 680 419 505 452 424 535 585 531 513 460 754 536 340 Calcium-dependent protein kinase (AHRD V3.3 *** Q6EE27_9ROSI) AT1G35670 Solyc11g018620.3 227 237 363 286 241 264 255 250 257 291 313 214 371 300 283 SNARE associated Golgi protein (AHRD V3.3 *** A0A2U1LN83_ARTAN) AT4G09580 Solyc11g018623.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc11g018625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g018627.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) Solyc11g018630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g018640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-RELATED SEQUENCE 6 (AHRD V3.3 *-* A0A2U1LVX1_ARTAN) Solyc11g018650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *-* A0A2I4GNE7_9ROSI) Solyc11g018660.2 0 3 4 2 14 2 5 0 15 3 10 11 0 13 22 NAC domain (AHRD V3.3 *** A0A200QK56_9MAGN) AT1G71930 Solyc11g018670.3 1768 1373 1241 950 870 899 886 914 1230 1094 1052 1148 1191 1368 1636 DnaJ domain (AHRD V3.3 *** A0A200QKD3_9MAGN) AT1G65280 Solyc11g018680.1 341 221 244 446 284 316 308 176 253 379 276 215 318 215 868 ABC transporter G family member 25 (AHRD V3.3 *-* A0A2G2WXS9_CAPBA) Solyc11g018690.2 271 241 125 281 240 154 162 272 276 337 202 184 276 284 570 ABC transporter G family member 25 (AHRD V3.3 *** A0A1U8GMW2_CAPAN) Solyc11g018700.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf15 protein (AHRD V3.3 *** J7H9P3_CAPAN) Solyc11g018710.1 12 36 23 53 36 46 27 32 30 44 14 14 22 9 70 hypothetical protein (AHRD V3.3 *** AT1G71970.1) AT1G71970 Solyc11g018715.1 12 3 9 0 0 9 4 2 6 3 15 1 3 5 3 Unknown protein Solyc11g018720.1 275 437 180 278 256 212 235 385 363 410 190 332 314 320 171 ALBINO3-like protein 2, chloroplastic (AHRD V3.3 *-* A0A1U8G0A5_CAPAN) Solyc11g018730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g018740.3 217 294 248 283 269 228 285 241 302 171 264 251 356 320 410 ALBINO3-like protein 2, chloroplastic (AHRD V3.3 *** A0A1U8G0A5_CAPAN) AT1G65080 Solyc11g018750.2 106 101 162 157 170 144 162 129 117 136 126 113 131 164 128 Unknown protein Solyc11g018760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g018770.3 402 329 314 261 268 289 259 279 280 290 274 250 295 271 199 Polynucleotide adenylyltransferase family protein (AHRD V3.3 *** A0A2U1LIC0_ARTAN) AT1G22660 Solyc11g018772.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** M1CN26_SOLTU) AT1G14550 Solyc11g018774.1 12 2 3 7 0 0 0 0 1 10 17 0 0 1 0 Peroxidase (AHRD V3.3 *** M1CN26_SOLTU) AT1G14550 Solyc11g018776.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g018778.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L2B9_TRIPR) ATMG00240 Solyc11g018800.3 4 0 6 1 0 0 0 0 1 3 3 3 3 2 1 Peroxidase (AHRD V3.3 *** K4D6T3_SOLLC) AT1G14550 Solyc11g018805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** M1CN26_SOLTU) AT1G14550 Solyc11g018810.2 165 128 94 67 74 118 85 91 88 92 87 124 92 97 100 Polynucleotide adenylyltransferase family protein (AHRD V3.3 *-* AT1G22660.1) Solyc11g018850.1 4 5 2 12 16 15 16 15 3 6 2 9 6 2 16 Unknown protein Solyc11g150108.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *** A0A2U1KGG4_ARTAN) Solyc11g018855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *** A0A2U1Q2F3_ARTAN) Solyc11g150109.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *** A0A2U1Q2F3_ARTAN) Solyc11g019850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g019860.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g019870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g019880.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g019890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g019900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *-* A0A200Q4Y1_9MAGN) Solyc11g019910.1 783 1765 1596 3513 3266 1890 1626 3770 2218 2237 2244 1793 2011 1379 623 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A2U1KPL8_ARTAN) AT4G25250 Solyc11g019920.2 120 153 136 117 143 92 135 128 121 96 159 135 206 160 147 Protein disulfide isomerase-like protein, putative (AHRD V3.3 *** A0A072VPJ1_MEDTR) AT1G35620 Solyc11g019930.2 2052 2061 1699 2649 2085 2169 2471 1951 1507 2008 1657 1756 2265 2386 1890 Receptor-like proteiny region, transmembrane domain-and RING domain-containing protein 2 (AHRD V3.3 *** A0A1U8GFH4_CAPAN) AT1G71980 Solyc11g150110.1 1 4 2 2 0 4 8 8 0 1 4 2 0 2 4 Unknown protein Solyc11g019940.1 4 1 0 0 0 0 2 0 2 0 0 0 0 1 0 Unknown protein Solyc11g019950.2 225 277 345 218 281 279 271 288 360 209 212 272 283 316 251 Long chain base biosynthesis protein 1 (AHRD V3.3 *** A0A2G3CLV0_CAPCH) AT4G36480 Solyc11g019960.2 256 352 265 352 369 262 329 333 310 322 230 316 399 344 243 immunoglobulin (AHRD V3.3 *** AT1G50120.1) AT1G50120 Solyc11g019965.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g019970.3 260 129 134 97 126 123 99 111 123 144 152 104 141 101 143 Plant organelle RNA recognition domain protein (AHRD V3.3 *** G7L9M0_MEDTR) AT5G48040 Solyc11g019990.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *-* A0A1Q3DFT4_CEPFO) Solyc11g020000.1 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 Acyl-CoA N-acyltransferase (NAT) superfamily protein (AHRD V3.3 *-* A0A2K3PIZ7_TRIPR) Solyc11g020010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020015.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc11g020030.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Lysine--tRNA ligase (AHRD V3.3 *-* A0A2G3CAI2_CAPCH) Solyc11g020040.2 686 317 236 308 186 195 178 207 359 326 352 263 266 326 390 heat shock protein 70 Solyc11g020060.2 150 145 116 171 104 135 114 140 143 114 109 146 208 176 217 D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** A0A1J3DFK2_NOCCA) AT1G72190 Solyc11g020080.3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN) Solyc11g020090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NBS-LRR protein (AHRD V3.3 *-* Q75UQ0_IPOBA) Solyc11g020100.3 209 118 89 61 37 45 28 45 102 110 72 58 77 73 102 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc11g020105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Auxin-responsive protein SAUR64 (AHRD V3.3 *-* A0A2G3B1B9_CAPCH) Solyc11g020130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitin-binding lectin 1 (AHRD V3.3 *** A0A2G3B775_CAPCH) Solyc11g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020140.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc11g020150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40S ribosomal protein S27 (AHRD V3.3 *** A0A2G2WLL6_CAPBA) Solyc11g020160.2 438 298 214 267 337 175 218 305 261 422 147 240 197 266 155 Nuclear pore complex protein NUP88 (AHRD V3.3 *-* A0A2G3B8C8_CAPCH) Solyc11g020170.1 75 34 47 46 38 32 22 31 27 37 92 39 27 44 91 Nuclear pore complex protein NUP88 (AHRD V3.3 *-* A0A2G2YE72_CAPAN) Solyc11g020180.3 232 112 86 91 89 93 105 75 111 146 38 89 66 107 101 Nuclear pore complex protein NUP88 (AHRD V3.3 *-* A0A2G2YE72_CAPAN) Solyc11g020190.1 1742 976 1215 1217 940 1125 1289 790 720 1041 1246 840 738 916 1444 Nuclear pore complex protein NUP88 (AHRD V3.3 *** A0A2G2YE72_CAPAN) AT5G05680 Solyc11g020210.2 38 40 55 23 38 27 33 47 45 33 47 31 41 33 3 Unknown protein Solyc11g020213.1 5 0 0 0 1 1 2 0 1 0 0 0 0 0 0 exopolygalacturonase-like (AHRD V3.3 --* XP_023552935.1) Solyc11g020215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc11g150112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc11g020230.1 327 245 446 236 148 166 179 169 226 271 971 322 316 289 481 Serine/threonine-protein kinase-like protein CCR4 (AHRD V3.3 *** A0A2G2WXQ5_CAPBA) AT5G47850 Solyc11g020240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020260.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-kinase, putative (AHRD V3.3 *** B9SZK5_RICCO) Solyc11g020270.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Kinase-like protein (AHRD V3.3 *** A0A2K3JPB8_TRIPR) Solyc11g020280.2 2956 2125 2339 2251 1160 1055 1029 1163 3122 3235 2829 2140 2651 2417 2461 Receptor-like protein kinase (AHRD V3.3 *** A0A2R6Q1M0_ACTCH) AT1G72180 Solyc11g020290.3 224 110 73 129 106 87 79 60 92 120 162 102 98 116 178 WD-40 repeat-containing protein MSI1 (AHRD V3.3 *-* A0A2G3AWF5_CAPCH) Solyc11g020300.2 2109 3062 2035 2423 2633 2444 2332 3070 2497 2513 1759 2638 2877 2581 2076 Protein TIC 40, chloroplastic (AHRD V3.3 *** A0A2G2ZN43_CAPAN) AT5G16620 Solyc11g020310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A0A2K3LJI2_TRIPR) AT4G11250 Solyc11g020330.1 4 0 9 3 0 3 2 0 6 5 0 0 0 0 0 leer-sHSP small heat shock protein AT4G10250 Solyc11g020340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3C5J4_CEPFO) Solyc11g150113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MRU3_TRIPR) ATMG00240 Solyc11g020350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40S ribosomal protein S27 (AHRD V3.3 *** A0A2G2WLL6_CAPBA) Solyc11g020360.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g020363.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *** A0A200Q4Y1_9MAGN) Solyc11g020367.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 adenylate isopentenyltransferase 5, chloroplastic-like (AHRD V3.3 *-* XP_004251342.2) Solyc11g020370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA dimethylallyltransferase 2 (AHRD V3.3 *-* A0A2G3BB92_CAPCH) Solyc11g020380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g020390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g020400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g020420.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 isopentenyltransferase 5 (AHRD V3.3 --* AT5G19040.3) Solyc11g020430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g020433.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** B3XZI4_IPONI) Solyc11g020437.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g020450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitin-binding lectin 1 (AHRD V3.3 *** A0A2G3B775_CAPCH) Solyc11g020460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 glucuronoxylan 4-O-methyltransferase 1 (AHRD V3.3 *-* A0A2I4F5K0_9ROSI) Solyc11g020475.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc11g020490.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40S ribosomal protein S27 (AHRD V3.3 *** A0A2G2WLL6_CAPBA) Solyc11g020500.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g020503.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020507.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** B3XZI3_IPONI) Solyc11g020510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g020520.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g020530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitin-binding lectin 1 (AHRD V3.3 *** A0A2G3B775_CAPCH) Solyc11g020540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 glucuronoxylan 4-O-methyltransferase 1 (AHRD V3.3 *-* A0A2I4F5K0_9ROSI) Solyc11g020550.2 0 0 0 0 2 0 0 0 0 3 0 0 0 0 0 Unknown protein Solyc11g150114.1 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020570.1 21 20 175 19 67 62 62 44 7 28 55 38 11 31 19 Tetratricopeptide-like helical domain-containing protein (AHRD V3.3 *-* A0A2U1PAV6_ARTAN) Solyc11g020575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020590.2 403 351 394 477 330 374 395 419 377 426 404 404 432 435 361 Peptide chain release factor 2 (AHRD V3.3 *** A0A2G3CLZ3_CAPCH) AT1G33330 Solyc11g020600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020610.3 459 446 535 299 532 500 505 569 483 468 392 533 324 342 315 Neutral/alkaline invertase (AHRD V3.3 *** I0CL58_MANES) AT4G09510 Solyc11g020620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A0A2K3LJI2_TRIPR) AT4G11250 Solyc11g020630.1 7 11 19 15 1 4 1 0 13 27 44 23 3 17 21 Benzyl alcohol O-benzoyltransferase (AHRD V3.3 *-* A0A2U1M7U4_ARTAN) Solyc11g020640.3 20 18 3 32 0 2 5 0 19 34 47 10 37 42 11 Alcohol acyl transferase (AHRD V3.3 *** Q6QLX4_SOLLC) Solyc11g020660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *-* A0A2K3LJI2_TRIPR) AT4G11250 Solyc11g020670.1 3030 1403 1435 1268 547 416 476 537 715 1546 1128 677 1192 1480 2225 TCP transcription factor 12 AT1G58100 Solyc11g020690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020710.2 82 69 73 62 91 46 56 61 73 84 33 56 72 85 59 cytochrome C oxidase biogenesis Cmc1-like protein (AHRD V3.3 *** AT1G31175.2) AT1G31175 Solyc11g020720.1 70 18 58 59 24 26 43 34 38 58 51 86 17 20 65 Hydrolase-like protein family (AHRD V3.3 *-* AT1G29120.2) Solyc11g020730.1 260 107 146 189 152 160 145 137 136 160 169 180 121 157 193 Unknown protein Solyc11g020760.3 142 185 157 184 196 186 226 216 192 188 124 163 128 253 98 DEAD/DEAH box RNA helicase family protein (AHRD V3.3 *-* A0A1P8APH5_ARATH) Solyc11g020770.3 331 273 517 388 297 457 493 351 271 223 420 347 360 503 543 DEAD/DEAH box RNA helicase family protein (AHRD V3.3 *-* A0A2U1L9R3_ARTAN) Solyc11g020780.2 2597 2091 1669 1595 1695 1595 1673 1915 1448 1859 1207 1886 1720 1914 1241 dCK/dGK-like deoxyribonucleoside kinase AT1G72040 Solyc11g020785.1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MA39_TRIPR) Solyc11g020810.2 1720 2736 1824 1392 1881 2008 1743 2008 1998 1211 1508 1664 3000 2689 2046 AdoMet-dependent rRNA methyltransferase SPB1 (AHRD V3.3 *-* U9TNP9_RHIID) AT4G25730 Solyc11g020820.2 485 561 521 332 354 308 381 295 391 237 354 327 590 606 526 AdoMet-dependent rRNA methyltransferase SPB1 (AHRD V3.3 *** A0A2C5X518_9PEZI) AT4G25730 Solyc11g020823.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc11g020827.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc11g020840.1 8 4 0 6 1 3 0 2 1 6 1 1 0 0 0 Unknown protein Solyc11g020843.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1KQG6_ARTAN) Solyc11g020847.1 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VNR7_9ASPA) ATMG00810 Solyc11g020850.3 2 0 0 1 0 0 0 0 9 1 0 0 0 0 0 Zein-binding domain-containing protein (AHRD V3.3 *** A0A2U1P5H2_ARTAN) AT5G57830 Solyc11g020860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 galactosyltransferase family protein (AHRD V3.3 *-* AT1G30260.1) AT1G30260 Solyc11g020870.3 478 860 596 757 800 748 784 857 692 574 587 739 1300 984 742 UPF0160 protein MYG1, mitochondrial (AHRD V3.3 *** A0A1U8GMC4_CAPAN) AT5G41970 Solyc11g020873.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g150115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020877.1 652 1385 1470 1387 1292 1454 1447 1123 678 606 1181 811 1418 1327 1679 40S ribosomal protein S29-like (AHRD V3.3 *** A0A2I4F7M1_9ROSI) AT3G44010 Solyc11g020900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020905.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020910.3 692 624 584 637 714 788 717 714 608 618 466 754 556 593 434 2-isopropylmalate synthase (AHRD V3.3 *** AT4G27510.1) AT4G27510 Solyc11g020930.1 50 9 33 24 20 36 11 10 10 16 0 18 20 17 17 Unknown protein Solyc11g020950.3 0 1 0 0 0 1 0 3 0 3 0 0 0 0 0 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** F4I9R1_ARATH) Solyc11g020955.1 28 32 21 24 9 12 2 4 113 49 21 54 22 73 29 Unknown protein Solyc11g020960.2 1437 18379 22745 21512 68749 58758 59581 65329 33569 11778 25295 43707 9602 29118 6911 Proteinase inhibitor type-2 (AHRD V3.3 *** A0A2G3AT14_CAPCH) AT1G72060 Solyc11g020970.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020975.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g020990.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Proteinase inhibitor type-2 (AHRD V3.3 *** A0A2G2V3L7_CAPBA) Solyc11g020995.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ67_TRIPR) Solyc11g021010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0WFA0_9ASPA) Solyc11g021020.1 102 71 405 393 202 233 195 199 760 880 1747 1268 72 235 591 Proteinase inhibitor type-2 (AHRD V3.3 *-* A0A2G2V3L7_CAPBA) Solyc11g021040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6QF80_ACTCH) Solyc11g021050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g021060.2 873 802 3849 4200 1614 1429 1041 1076 35257 11424 46070 29151 2291 5333 4413 TOMARPIX proteinase inhibitor Solyc11g021063.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2R4PB26_9MAGN) Solyc11g021067.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc11g021080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2XPU4_CAPBA) Solyc11g021090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A125RTJ3_9ASTR) Solyc11g021100.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 (AHRD V3.3 *-* A0A2U1LKJ3_ARTAN) Solyc11g021110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* L7NPN4_9ASTR) Solyc11g021120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A2L1ZQA7_9LAMI) Solyc11g021160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta, chloroplastic (AHRD V3.3 *-* A0A2G2WCU2_CAPBA) Solyc11g021180.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc11g021190.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* I6N9A4_DATST) Solyc11g021195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* I6N9A4_DATST) Solyc11g021210.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis protein CcsA (AHRD V3.3 *** A0A1U8QCK2_CAPAN) ATCG01040 Solyc11g021213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* A0A1U8QCJ1_CAPAN) Solyc11g021215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* I6N9A7_DATST) Solyc11g021217.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic (AHRD V3.3 *-* I6N9B0_DATST) Solyc11g021220.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (AHRD V3.3 *** I6N9B1_DATST) Solyc11g021230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *-* A0A2G3B5U9_CAPCH) Solyc11g021233.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *** A0A2G2XBN0_CAPBA) Solyc11g021237.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *** A0A1U8QCJ3_CAPAN) Solyc11g021240.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* I6N9B5_DATST) Solyc11g021260.1 0 1 0 2 5 0 0 3 0 0 1 1 0 0 2 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc11g021270.1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* I6N9B5_DATST) Solyc11g021280.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc11g021300.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc11g021310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_TOBAC) ATCG01000 Solyc11g021360.3 116 44 103 137 0 2 1 1 57 63 160 125 12 102 179 Unknown protein Solyc11g021363.1 0 0 0 3 1 0 0 0 3 1 2 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQA9_TRIPR) Solyc11g021365.2 35 83 113 92 73 94 106 73 70 56 118 57 55 43 123 SSUH2-like protein (AHRD V3.3 *** AT1G22630.1) AT1G22630 Solyc11g022380.3 958 741 622 553 658 544 599 698 823 786 674 651 655 673 729 Phosphoinositide phosphatase family protein (AHRD V3.3 *** A0A2U1L884_ARTAN) AT1G22620 Solyc11g150116.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g022390.2 541 752 526 529 490 564 608 572 547 452 464 500 692 632 699 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (AHRD V3.3 *** A0A327YSB6_9BACI) AT1G72090 Solyc11g022400.1 494 306 303 367 325 321 362 361 374 445 285 284 231 315 390 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061FS12_THECC) AT1G22610 Solyc11g022410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc11g022420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *** A0A2I4EBE3_9ROSI) Solyc11g022430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 homeobox-leucine zipper protein ROC8 (AHRD V3.3 *-* A0A2I4EBE3_9ROSI) Solyc11g022450.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Unknown protein Solyc11g022460.3 481 400 219 364 454 373 406 625 671 751 415 560 400 321 327 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** A0A061FS12_THECC) Solyc11g022465.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g022470.2 1545 978 940 907 807 661 725 750 913 944 902 891 1216 1032 998 MYB transcription factor (AHRD V3.3 *** V5Q0T6_9CARY) AT2G01060 Solyc11g022480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 NAC domain-containing protein 78-like (AHRD V3.3 *** XP_004228763.1) Solyc11g022490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g022500.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g022530.3 68 23 14 9 0 7 3 1 10 19 23 4 11 15 49 Late embryogenesis abundant domain-containing protein / LEA domain-containing protein (AHRD V3.3 *-* Q9C7H3_ARATH) AT1G72100 Solyc11g022540.3 668 1003 941 845 913 1170 1037 1037 910 893 700 872 989 970 945 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G3CMH8_CAPCH) Solyc11g022590.1 381 1560 1919 1665 1666 1830 1774 1590 24531 12734 29067 28754 1836 3041 4513 trypsin inhibitor-like protein precursor Solyc11g022600.2 231 255 262 216 233 319 274 254 267 235 263 251 224 248 240 Mitochondrial transcription termination factor family protein (AHRD V3.3 *-* B4FH48_MAIZE) Solyc11g022610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S4, chloroplastic (AHRD V3.3 *-* A0A2G2ZPZ2_CAPAN) Solyc11g022620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S4, chloroplastic (AHRD V3.3 *-* A0A2G3BYP0_CAPCH) Solyc11g050710.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exocyst complex component SEC10 (AHRD V3.3 *** A0A2G2ZN90_CAPAN) Solyc11g050730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor MYB1R1 (AHRD V3.3 *** A0A2G3CMC2_CAPCH) Solyc11g050735.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g050760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *-* A0A2G2WAS0_CAPBA) Solyc11g050770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II reaction center protein Z (AHRD V3.3 *** A0A1U8QD60_CAPAN) Solyc11g050790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 *-* A0A2U1LFU0_ARTAN) Solyc11g050800.1 0 4 0 0 0 0 1 0 2 3 1 0 0 0 0 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** A0A328D796_9ASTE) Solyc11g050810.1 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 Cellulose synthase (AHRD V3.3 *-* K4BTR6_SOLLC) Solyc11g050820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g050840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g050850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine decarboxylase (AHRD V3.3 *-* A0A1U8F8Y3_CAPAN) Solyc11g050855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g050880.2 5 5 0 23 15 11 10 0 12 13 46 11 20 4 24 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** A0A328D796_9ASTE) Solyc11g050890.2 94 49 50 73 13 47 68 38 44 54 90 96 123 68 51 Unknown protein Solyc11g050900.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) Solyc11g050930.1 0 5 0 6 12 0 1 2 3 4 6 9 3 6 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc11g050960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) AT3G51210 Solyc11g050990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A2I4EXI8_9ROSI) Solyc11g051000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein FAR1-related sequence 5-like (AHRD V3.3 *-* A0A2K3LMW2_TRIPR) Solyc11g051010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A2I4EXI8_9ROSI) Solyc11g051015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc11g051020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A1Q3C1C4_CEPFO) Solyc11g051030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *-* A0A2K3NPW2_TRIPR) Solyc11g150137.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing transcription factor VRN1-like (AHRD V3.3 --* XP_004234716.1) Solyc11g051060.2 63 16 42 32 0 0 4 1 6 20 10 0 76 28 35 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6QF80_ACTCH) AT5G40990 Solyc11g051090.1 0 0 0 3 0 0 2 1 5 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc11g051100.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase 1-like (AHRD V3.3 *-* A0A1U7XNA4_NICSY) Solyc11g150138.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Coatomer subunit zeta-3 (AHRD V3.3 *-* A0A2K3LMA2_TRIPR) Solyc11g051120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase 5-like (AHRD V3.3 *-* A0A1S3YQY5_TOBAC) Solyc11g051123.1 1 6 23 3 1 8 9 8 6 5 1 4 0 0 2 Unknown protein Solyc11g150139.1 0 0 0 0 5 2 7 0 1 2 0 0 0 0 0 Unknown protein Solyc11g051127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g051160.2 798 1101 1057 724 806 741 663 674 1270 621 949 517 899 696 1021 Patellin-1 (AHRD V3.3 *** A0A2G2YV42_CAPAN) AT1G22530 Solyc11g051170.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *-* J7H3P2_CAPAN) Solyc11g051171.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g051172.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g051173.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g051174.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g051176.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g051178.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g027800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A2G3B6Y2_CAPCH) AT2G03760 Solyc11g027810.3 157 158 264 226 178 238 263 138 116 111 250 146 225 197 224 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) (AHRD V3.3 *** Q93WJ5_ARATH) AT1G22510 Solyc11g027820.1 8 10 27 7 17 14 10 11 12 4 1 14 17 6 12 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) (AHRD V3.3 *-* Q0WWX8_ARATH) Solyc11g027830.2 305 249 447 374 414 473 513 370 377 318 480 368 251 347 407 ATP-dependent protease La (LON) domain protein (AHRD V3.3 *** A0A2U1KRZ5_ARTAN) AT1G35340 Solyc11g027840.2 226 35 52 30 10 4 1 5 33 69 27 11 18 45 130 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9C8P5_ARATH) AT1G35420 Solyc11g027860.2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 Unknown protein Solyc11g027870.2 376 680 554 636 692 764 740 760 512 611 634 648 776 607 522 MICOS complex subunit Mic10-like protein (DUF543) (AHRD V3.3 *** F4I1E5_ARATH) AT1G72170 Solyc11g027880.2 1062 1554 1195 1267 1589 1540 1575 1717 1432 1089 952 1385 1250 1236 1112 Patellin-5 (AHRD V3.3 *** A0A2G3AQX0_CAPCH) AT1G72160 Solyc11g027887.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Patellin-5 (AHRD V3.3 *-* A0A2G3AQX0_CAPCH) Solyc11g027890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *-* A0A2U1NFM1_ARTAN) Solyc11g150117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein CONSTANS-LIKE 4 (AHRD V3.3 *-* A0A2G2VJD2_CAPBA) Solyc11g027895.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc11g027897.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Eukaryotic translation initiation factor 4G (AHRD V3.3 *-* A0A2G3AM37_CAPAN) Solyc11g027910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g027920.2 0 0 5 0 0 0 0 0 7 7 0 0 0 10 5 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (AHRD V3.3 *-* A0A2G2WQM5_CAPBA) Solyc11g027930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase SRK2E (AHRD V3.3 *-* A0A2G2W9Z1_CAPBA) Solyc11g027933.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g027935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 adenylate isopentenyltransferase 5, chloroplastic-like (AHRD V3.3 *-* XP_025883839.1) Solyc11g027937.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Isopentenyltransferase (AHRD V3.3 *-* D0F0D2_VITVI) Solyc11g027980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g150118.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* B3XZI4_IPONI) Solyc11g150119.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 adenylate isopentenyltransferase 5, chloroplastic-like (AHRD V3.3 *-* XP_004245333.1) Solyc11g150120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *** A0A2U1KY89_ARTAN) Solyc11g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g150122.1 186 106 125 120 136 110 152 140 78 108 107 109 85 121 97 Unknown protein Solyc11g028000.1 63 66 48 33 41 47 42 63 48 58 31 26 52 50 41 Unknown protein Solyc11g028010.2 1301 851 975 668 622 619 592 665 1143 1011 932 889 1391 1050 1204 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B8D5_ARATH) AT1G33970 Solyc11g028020.3 7 0 0 3 0 0 0 0 0 0 0 0 0 0 0 Tomato AGAMOUS like 11 Solyc11g028025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CLP4_CEPFO) Solyc11g028040.2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like protein (AHRD V3.3 *** A0A1U8HFN5_CAPAN) Solyc11g028060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defensin-like protein (AHRD V3.3 *-* A0A1U8HFN5_CAPAN) Solyc11g028070.2 1 3 7 14 1 2 4 4 13 12 5 19 3 2 18 Defensin-like protein (AHRD V3.3 *** A0A1U8HFN5_CAPAN) Solyc11g028080.2 202 114 181 168 91 90 100 102 120 164 157 99 174 158 218 transmembrane protein (AHRD V3.3 --* AT1G57765.2) Solyc11g028090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 elongation factor 1-gamma-like (AHRD V3.3 *-* A0A2I4H3D0_9ROSI) Solyc11g028100.2 3555 5168 5333 4455 5533 5199 5215 5990 4783 4285 3754 4704 5477 5016 5039 Elongation factor 1-gamma (AHRD V3.3 *** A0A2G2YHE8_CAPAN) AT1G09640 Solyc11g028105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L2B9_TRIPR) ATMG00240 Solyc11g028110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g028120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Histone H2A (AHRD V3.3 *** A0A1U8E2W4_CAPAN) Solyc11g028140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* M9THZ5_SOLCA) Solyc11g028160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis B (AHRD V3.3 *** A0A0C5B708_9SOLA) Solyc11g028165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 sister-chromatid cohesion protein 3 (AHRD V3.3 --* XP_025886976.1) Solyc11g028170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g150123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* XP_021602385.1) Solyc11g028180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g150124.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* B3XZI4_IPONI) Solyc11g150125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g028200.1 14 3 0 3 8 0 1 0 1 0 0 1 1 1 3 Protein EARLY FLOWERING 4 (AHRD V3.3 *** A0A2G3CBN6_CAPCH) Solyc11g028210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g028213.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** B3XZI4_IPONI) Solyc11g028217.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-directed DNA polymerase (AHRD V3.3 *-* A0A2I0W698_9ASPA) Solyc11g028270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVG5_SOLTU) Solyc11g028310.3 0 2 3 14 0 2 1 4 2 4 2 5 1 2 5 DNA topoisomerase 6 subunit B (AHRD V3.3 *-* A0A2G3AJK9_CAPAN) Solyc11g150126.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vetispiradiene synthase 1 (AHRD V3.3 *-* A0A2G3ASR5_CAPCH) Solyc11g028320.1 2 4 0 11 3 4 1 3 7 3 3 12 4 4 12 Unknown protein Solyc11g028325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g028330.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA topoisomerase 6 subunit B (AHRD V3.3 *-* A0A328D641_9ASTE) Solyc11g028340.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA topoisomerase 6 subunit B (AHRD V3.3 *-* A0A2G3AJK9_CAPAN) Solyc11g028350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA topoisomerase 6 subunit B (AHRD V3.3 *-* A0A2G3AJK9_CAPAN) Solyc11g028355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3CK86_NOCCA) Solyc11g030380.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Elongation factor (AHRD V3.3 *** B3H607_ARATH) AT1G44770 Solyc11g030383.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g030387.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g030390.2 1201 599 583 544 366 422 507 475 580 766 640 542 771 605 608 Elongation factor (AHRD V3.3 *** B3H607_ARATH) AT1G44770 Solyc11g030470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g150127.1 423 271 169 278 208 146 191 242 265 287 148 268 197 283 191 Unknown protein Solyc11g030550.3 475 253 428 323 257 234 313 196 219 233 254 223 229 310 554 Cyclin (AHRD V3.3 *-* A0A200PQW1_9MAGN) Solyc11g030553.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) ATMG00240 Solyc11g030555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *-* A0A2U1Q2F3_ARTAN) Solyc11g030557.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 isopentenyltransferase 7 (AHRD V3.3 --* AT3G23630.1) Solyc11g030560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g030570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 NADH-ubiquinone oxidoreductase chain 4 (AHRD V3.3 *-* A0A2G3BZG3_CAPCH) Solyc11g030580.1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 Unknown protein Solyc11g030590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g030600.3 1313 2914 2895 2780 4125 3898 4259 4215 2854 2363 2369 3112 2023 3202 1549 cytosine-5 DNA methyltransferase AT5G49160 Solyc11g030640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g030645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g030700.1 31 36 18 28 60 27 20 33 53 57 41 75 55 41 40 Unknown protein Solyc11g030710.2 322 284 263 329 327 333 387 285 323 328 380 333 354 278 339 UPF0301 protein (AHRD V3.3 *** A0A2K3P0A8_TRIPR) AT1G33780 Solyc11g030720.2 284 474 476 424 657 600 571 580 548 381 428 433 550 521 435 2-alkenal reductase (NADP(+)-dependent) (AHRD V3.3 *** A0A2G2ZP98_CAPAN) Solyc11g030730.2 168 147 163 72 29 99 79 54 74 115 134 108 322 138 129 Cytochrome P450 (AHRD V3.3 *-* A0A200Q069_9MAGN) Solyc11g030760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1-like protein 3 (AHRD V3.3 *-* A0A1U8F4Y3_CAPAN) Solyc11g030770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vacuolar protein-sorting-associated protein 33-like protein (AHRD V3.3 *-* A0A2G2ZKM5_CAPAN) Solyc11g030780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1-like protein 3 (AHRD V3.3 *-* A0A2G3B0T6_CAPCH) Solyc11g030790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase 2B (AHRD V3.3 *-* ATMG01320.1) Solyc11g030800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g030810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g030820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2S1UC45_9GENT) Solyc11g030830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *-* A0A2G3AR56_CAPCH) Solyc11g030840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g030850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc11g030860.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc11g030880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* O79414_SOLTU) Solyc11g030890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* O79414_SOLTU) Solyc11g030900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Maturase (AHRD V3.3 *-* O79414_SOLTU) Solyc11g030910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g030915.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 5 (AHRD V3.3 *-* A0A0C5ARN6_HYONI) Solyc11g030920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JQL1_9VIRU) ATMG00490 Solyc11g030930.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH-ubiquinone oxidoreductase chain 6 (AHRD V3.3 *-* A0A0C5B7I5_9SOLA) Solyc11g030935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S4 (AHRD V3.3 *-* A0A2H4NB20_SOLLC) Solyc11g030940.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S4 (AHRD V3.3 *-* A0A0C5B2D1_HYONI) Solyc11g030950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g150128.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g150129.1 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc11g031950.1 2 58 59 33 26 31 37 36 42 52 30 18 5 25 33 Glucuronoxylan 4-O-methyltransferase 2 (AHRD V3.3 *** A0A2G2VV10_CAPBA) AT1G33800 Solyc11g031960.2 26 28 50 24 38 13 20 15 77 45 99 74 8 12 4 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3C1I3_CAPCH) AT1G33811 Solyc11g031970.2 74 35 39 70 31 19 43 30 57 53 67 45 37 57 115 transmembrane protein (AHRD V3.3 *** AT4G09970.1) AT4G09970 Solyc11g031980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase superfamily protein (AHRD V3.3 *-* A0A2U1KAY9_ARTAN) Solyc11g032010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent protein kinase (AHRD V3.3 *-* A0A2U1LEA3_ARTAN) Solyc11g032020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Replication protein A 70 kDa DNA-binding subunit (AHRD V3.3 *-* A0A2K3NWY7_TRIPR) Solyc11g032025.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc11g032040.3 1 9 13 12 0 4 1 0 2 7 22 1 3 7 0 Transposon, En/Spm-like, Transposase-associated domain protein (AHRD V3.3 *-* A0A2U1N4P4_ARTAN) Solyc11g032045.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc11g032050.2 20 14 29 37 32 38 34 43 59 21 12 48 8 36 18 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3CP09_CAPCH) AT1G71691 Solyc11g032060.3 2 0 0 0 0 0 1 2 12 1 0 4 3 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2VM87_CAPBA) Solyc11g032065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc11g032070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g032090.3 562 312 398 327 247 287 291 218 346 471 251 406 383 391 506 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2) Solyc11g032100.2 64 53 103 103 36 26 36 14 35 23 55 16 100 63 246 Tomato AGAMOUS 12 AT1G71692 Solyc11g032110.1 23 3 28 0 0 4 5 3 5 16 0 0 18 9 10 Unknown protein Solyc11g032120.2 58 205 222 205 321 455 394 383 237 166 194 347 140 190 138 histone H3-like centromeric protein HTR12 (AHRD V3.3 *-* XP_004250682.1) Solyc11g032130.3 688 334 461 359 204 292 287 240 265 322 294 253 283 329 427 12-oxophytodienoate reductase (AHRD V3.3 *** A0A2K3MVZ0_TRIPR) Solyc11g032140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *-* A0A2G2ZZZ1_CAPAN) Solyc11g032160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *-* A0A1U8FYZ2_CAPAN) Solyc11g032170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g032180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 enhancer of mRNA-decapping protein 4-like (AHRD V3.3 *-* A0A2I4F8S0_9ROSI) Solyc11g032190.1 102 46 44 54 28 61 45 30 29 49 54 52 25 39 21 Unknown protein Solyc11g032200.2 727 503 457 519 305 477 400 342 459 593 598 487 510 493 573 Lipase (AHRD V3.3 *** A0A1U8FAS4_CAPAN) AT2G15230 Solyc11g032220.2 8 3 3 8 6 25 21 21 6 20 21 10 0 4 12 12-oxophytodienoate reductase (AHRD V3.3 *** A0A2K3LPH4_TRIPR) Solyc11g032230.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12-oxophytodienoate reductase (AHRD V3.3 *** A0A2K3MVZ0_TRIPR) Solyc11g033250.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g033260.2 418 437 560 507 573 604 638 599 438 404 388 447 463 479 348 Pseudouridine-5'-phosphate glycosidase (AHRD V3.3 *** A0A1U8FDI0_CAPAN) AT1G50510 Solyc11g033270.2 4317 3090 2767 2903 2615 2386 2629 2785 3280 3617 3026 2960 2573 2925 3639 MAP kinase kinase kinase 82 AT3G13530 Solyc11g033280.2 1819 2898 1911 1730 2357 2221 2288 3005 2306 1932 1854 2022 3275 2473 2162 ATP-dependent RNA helicase (AHRD V3.3 *** U9T5U8_RHIID) AT3G19760 Solyc11g033281.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g033282.1 1276 1182 882 1161 844 933 1008 1099 1074 1293 1029 1186 1155 1110 1124 No exine formation-1 (AHRD V3.3 *** Q9LYR7_ARATH) AT5G13390 Solyc11g033283.1 224 299 395 314 386 487 305 343 311 319 544 357 256 328 576 Protein NRT1/ PTR FAMILY 6.1 (AHRD V3.3 *** A0A2G2ZGE5_CAPAN) AT5G13400 Solyc11g033284.1 312 396 357 369 445 360 410 338 386 223 346 365 439 457 418 Peptidylprolyl isomerase (AHRD V3.3 *** A0A2G3CEL0_CAPCH) AT5G13410 Solyc11g033286.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc11g033288.1 2637 2618 2044 2124 2304 2022 1950 2921 3219 3009 1872 2989 3717 2968 2070 Transaldolase (AHRD V3.3 *** Q7XJH9_SOLLC) AT5G13420 Solyc11g045690.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2X995_CAPBA) AT5G13910 Solyc11g045680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2X995_CAPBA) AT5G13910 Solyc11g045670.3 582 381 420 576 262 420 383 328 391 384 469 301 317 441 628 S-acyltransferase (AHRD V3.3 *** A0A2G2ZGM7_CAPAN) Solyc11g045675.1 25 16 5 15 8 4 12 15 11 7 2 5 6 2 10 Unknown protein Solyc11g045640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TCP transcription factor 1 (AHRD V3.3 *** G3BGU2_SOLLC) Solyc11g150136.1 22 26 65 52 43 54 47 16 11 16 47 30 30 29 48 Unknown protein Solyc11g045610.2 486 380 440 537 349 483 480 497 533 596 406 509 413 613 812 Cyclin-dependent kinase C-1 (AHRD V3.3 *** A0A1U8GPD8_CAPAN) AT1G33770 Solyc11g045615.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc11g045570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g045560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g045550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g045540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g045530.3 91 173 303 274 215 210 191 152 182 183 141 234 259 305 419 LOB domain-containing protein (AHRD V3.3 *** A0A2K3NJB4_TRIPR) Solyc11g045520.2 4 6 27 31 86 61 40 46 29 17 4 42 3 27 101 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1QIJ9_ARTAN) AT3G12900 Solyc11g045510.3 261 212 174 168 147 204 180 162 207 209 115 211 207 208 187 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G12920.1) AT5G12920 Solyc11g045480.3 627 377 353 377 225 346 382 217 352 374 433 335 382 443 437 Myosin-binding protein 7 (AHRD V3.3 *-* A0A1U8FIW1_CAPAN) Solyc11g045460.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A1P8BCJ0_ARATH) Solyc11g045450.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3DE23_CEPFO) Solyc11g045440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S12-B, chloroplastic (AHRD V3.3 *-* A0A2G3D2S1_CAPCH) Solyc11g045430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein (AHRD V3.3 *-* A0A1D8I1Y1_ORYRU) Solyc11g045435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LF16_TRIPR) Solyc11g045410.1 0 0 0 2 0 0 0 0 1 2 0 0 0 2 0 CC-NBS-LRR type resistance-like protein (AHRD V3.3 *-* E3W9R6_CAPCH) Solyc11g045400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g045390.3 412 419 458 420 399 390 408 308 347 250 419 297 461 402 740 D-lactate dehydrogenase (AHRD V3.3 *-* A0A2K3MN53_TRIPR) Solyc11g045370.1 239 188 132 162 166 146 119 192 213 158 127 179 172 229 109 D-lactate dehydrogenase [cytochrome], mitochondrial (AHRD V3.3 *** A0A2G2VN45_CAPBA) AT5G06580 Solyc11g045360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin cross-linking protein, putative (DUF569) (AHRD V3.3 *-* Q8GXC9_ARATH) Solyc11g045350.2 1531 771 554 682 293 410 451 446 583 718 498 544 605 685 539 Plant regulator RWP-RK family protein (AHRD V3.3 *** G7IS09_MEDTR) AT2G43500 Solyc11g045340.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g045330.2 907 869 1032 1193 1746 1719 1607 1725 991 1281 1159 1269 962 997 1001 GPI-anchored protein (AHRD V3.3 *** Q8RWE3_ARATH) AT2G30700 Solyc11g045332.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 2 (AHRD V3.3 *-* A0A2G2XIB9_CAPBA) Solyc11g045334.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix Sin3-like protein (AHRD V3.3 *-* A0A178WJA6_ARATH) Solyc11g045336.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix protein Sin3-like 4 (AHRD V3.3 *-* A0A2G3D9H4_CAPCH) Solyc11g045338.1 0 3 4 0 0 0 1 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc11g045320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Paired amphipathic helix Sin3-like protein (AHRD V3.3 *-* A0A178WJA6_ARATH) Solyc11g045310.3 242 247 233 288 303 252 304 206 257 214 255 243 197 264 332 Transcription factor, MADS-box (AHRD V3.3 *-* A0A2U1Q810_ARTAN) Solyc11g045290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dimer_Tnp_hAT domain-containing protein (AHRD V3.3 *-* A0A1Q3CET9_CEPFO) Solyc11g045270.3 196 163 127 144 171 141 116 120 164 117 190 117 159 132 284 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 *-* AT3G11890.7) Solyc11g045260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A2H4REW2_9LAMI) Solyc11g045250.1 323 331 203 292 440 276 321 414 289 250 142 362 251 223 197 Peptidase M28 (AHRD V3.3 *** A0A2U1PM28_ARTAN) AT3G54720 Solyc11g045230.2 21 39 21 47 53 43 45 36 26 17 31 38 66 50 21 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-like protein (AHRD V3.3 *** B3H7B1_ARATH) AT2G38920 Solyc11g045220.2 153 80 138 108 122 146 123 131 106 96 158 101 100 72 139 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QEC7_9MAGN) Solyc11g045225.1 993 505 643 669 530 519 455 392 404 454 463 539 442 379 652 Ankyrin repeat-containing protein (AHRD V3.3 *-* A0A1J3FST8_NOCCA) Solyc11g045210.2 317 258 246 266 264 324 278 314 296 356 268 174 444 345 301 hypothetical protein (AHRD V3.3 *** AT3G59490.1) AT3G59490 Solyc11g045215.1 140 148 56 72 140 87 76 140 147 121 66 121 98 109 68 DEAD-box ATP-dependent RNA helicase 50 (AHRD V3.3 *-* A0A1U8EMF9_CAPAN) Solyc11g045180.3 219 251 244 233 234 264 276 278 241 222 304 221 271 252 321 DEAD-box ATP-dependent RNA helicase 50 (AHRD V3.3 *-* A0A1U8EMF9_CAPAN) Solyc11g045160.3 400 424 260 305 326 369 367 385 576 442 232 409 183 341 285 Vacuolar protein sorting-associated protein, putative (DUF1162) (AHRD V3.3 *** A0A1P8BEF0_ARATH) AT5G24740 Solyc11g045140.1 8 6 2 5 19 7 10 14 13 5 0 3 3 2 4 Vacuolar protein sorting-associated protein (AHRD V3.3 *-* A0A1Y1HXB5_KLENI) Solyc11g045130.2 1056 760 1050 929 804 869 784 792 733 1006 1126 776 775 719 819 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1KV50_ARTAN) Solyc11g045120.3 1304 772 704 493 301 377 416 388 682 766 613 536 802 714 938 Translation initiation factor SUI1 (AHRD V3.3 *** A0A200QAE5_9MAGN) AT1G71350 Solyc11g045125.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc11g045110.3 167 160 149 222 154 125 127 94 95 131 192 74 232 167 396 Sucrose-phosphate synthase family protein (AHRD V3.3 *** A0A2U1M1C4_ARTAN) AT4G10120 Solyc11g045100.2 639 598 665 777 947 1041 946 762 628 410 849 657 673 688 1058 tropomyosin (AHRD V3.3 *** AT1G33500.3) AT1G33500 Solyc11g045040.2 232 204 226 207 217 203 271 147 173 192 248 183 217 247 314 Glycerophosphodiester phosphodiesterase GDPD4 (AHRD V3.3 *** A0A2G3ADB8_CAPAN) AT1G71340 Solyc11g045030.2 105 180 288 269 213 318 276 227 198 174 296 200 280 243 354 E3 ubiquitin-protein ligase (AHRD V3.3 *** Q9C803_ARATH) AT1G33490 Solyc11g045020.1 1 16 0 7 7 12 14 12 10 3 0 7 8 6 6 eIF-2-alpha kinase GCN2 isoform X1 (AHRD V3.3 *-* XP_010313093.1) Solyc11g045000.1 50 51 18 49 49 30 48 66 63 43 20 31 39 54 59 Protein kinase family protein (AHRD V3.3 *-* A0A2U1M9Z1_ARTAN) Solyc11g044990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase family protein (AHRD V3.3 *-* F4J8A5_ARATH) Solyc11g044980.1 18 18 32 5 18 13 4 9 17 15 4 6 17 18 41 Protein kinase family protein (AHRD V3.3 *-* F4J8A5_ARATH) Solyc11g044960.3 108 196 80 90 112 127 133 133 103 123 139 114 160 184 172 Protein kinase family protein (AHRD V3.3 *-* A0A2U1M9Z1_ARTAN) Solyc11g044940.1 282 329 303 334 497 496 465 513 404 342 398 462 218 373 241 Serine/threonine-protein kinase-like protein ACR4 (AHRD V3.3 *** A0A2G2YFK6_CAPAN) AT3G59420 Solyc11g044943.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3L3R5_TRIPR) Solyc11g044947.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* D5LW00_9POAL) Solyc11g044930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g044933.1 278 158 129 152 203 199 216 203 162 148 103 177 114 145 85 Transposon, En/Spm-like, Transposase-associated domain protein (AHRD V3.3 *** A0A2U1M4R3_ARTAN) Solyc11g044937.1 825 458 665 473 595 561 637 371 405 355 523 371 291 460 530 Plant transposase (Ptta/En/Spm family) (AHRD V3.3 *-* F4I6H5_ARATH) Solyc11g044920.1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent protein kinase (AHRD V3.3 *-* CDPK_DAUCA) Solyc11g044910.2 158 51 49 33 80 73 91 81 17 40 26 19 11 37 107 Beta-D-xylosidase 4 (AHRD V3.3 *** A0A2G2VN32_CAPBA) AT5G49360 Solyc11g044900.2 655 562 585 462 414 513 525 549 465 555 404 491 455 512 623 Poly(A) RNA polymerase GLD2 (AHRD V3.3 *-* A0A2I0VGJ9_9ASPA) AT3G45750 Solyc11g044880.3 918 946 838 1056 865 912 1049 930 1129 944 1054 869 779 871 952 Kinesin (AHRD V3.3 *** A0A200RCF1_9MAGN) AT4G39050 Solyc11g044870.2 716 630 643 685 649 637 757 657 590 630 700 568 673 659 847 armadillo repeat-containing protein 6 (AHRD V3.3 *** A0A2I4FVC9_9ROSI) AT4G33945 Solyc11g044875.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g044860.3 0 2 4 3 2 0 0 1 0 0 0 1 2 2 24 Clathrin assembly protein (AHRD V3.3 *** A0A2K3MQF8_TRIPR) Solyc11g044850.1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g044840.2 16 51 34 27 21 37 35 17 42 44 128 51 58 32 14 LL-diaminopimelate aminotransferase (AHRD V3.3 *** A0A2P5FUP3_TREOI) AT2G13810 Solyc11g044830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1LUR0_ARTAN) Solyc11g044820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1LUR0_ARTAN) Solyc11g044810.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1Q1F3_ARTAN) Solyc11g150135.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) ATMG00240 Solyc11g044800.3 499 451 503 416 406 435 372 396 445 392 440 342 516 489 578 PHP domain-containing protein (AHRD V3.3 *** A0A1Q3BVD1_CEPFO) Solyc11g044805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g044750.3 925 926 855 779 744 804 845 925 496 661 638 886 893 832 662 Single-stranded DNA-binding protein (AHRD V3.3 *** A0A2U1QE67_ARTAN) AT1G71260 Solyc11g044740.2 0 0 40 0 0 0 2 4 0 0 0 0 0 0 0 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3ALK2_CEPFO) Solyc11g044690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* TI214_SOLTU) Solyc11g044680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* K4EQH9_DATST) Solyc11g044670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* J7H3X3_CAPAN) Solyc11g044660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta, chloroplastic (AHRD V3.3 *-* A0A2U1KL25_ARTAN) Solyc11g044665.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta, chloroplastic (AHRD V3.3 *-* A0A2U1KL25_ARTAN) Solyc11g044640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g044643.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* J7H711_CAPAN) Solyc11g044645.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* Q9MUB1_SOLMA) Solyc11g044647.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* A0A1U8QCJ1_CAPAN) Solyc11g044600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (AHRD V3.3 *-* I6N9A7_DATST) Solyc11g044605.1 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 G2/mitotic-specific cyclin-1 (AHRD V3.3 *-* A0A2G3C661_CAPCH) Solyc11g044570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g044560.3 923 719 1192 1112 685 773 779 648 945 935 1031 872 1016 1062 1634 ABSCISIC ACID-INSENSITIVE 5-like protein 5 (AHRD V3.3 *** A0A1U8GBR9_CAPAN) Solyc11g044540.2 499 732 743 690 666 645 714 644 983 687 621 789 687 825 949 Na+/H+ antiporter (AHRD V3.3 *** A6Q0F8_MESCR) AT3G19490 Solyc11g044530.2 140 355 283 394 330 364 402 417 366 404 241 336 267 303 241 Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** A0A2U1MWE3_ARTAN) AT3G26070 Solyc11g044520.1 13 1 3 6 5 7 6 4 2 0 1 0 4 4 0 Unknown protein Solyc11g044510.3 386 195 208 223 178 180 229 200 266 257 216 211 246 251 233 B3 DNA binding domain-containing protein (AHRD V3.3 *** A0A2U1MBL5_ARTAN) Solyc11g044515.1 330 188 183 296 151 198 223 199 160 218 220 220 143 254 172 Unknown protein Solyc11g044490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A1U8FV93_CAPAN) Solyc11g044480.2 2894 1690 1411 1502 1156 1178 1345 1387 1580 2028 1294 1436 1546 1639 1803 Arm repeat superfamily protein (AHRD V3.3 *** A0A2K3NTC9_TRIPR) AT1G05960 Solyc11g044470.3 2964 3982 4382 3396 3920 3872 4428 3525 2929 2566 3278 2748 3406 3597 3449 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** Q67YS0_ARATH) AT1G33470 Solyc11g044460.3 0 0 0 3 1 2 4 3 0 0 0 0 0 0 0 Proline-rich receptor-like protein kinase PERK7 (AHRD V3.3 *** A0A2G3B9P3_CAPCH) AT3G18810 Solyc11g044450.3 748 631 310 290 261 241 198 200 348 629 420 118 991 330 333 DnaJ protein (AHRD V3.3 *** B6T720_MAIZE) Solyc11g044453.1 33 13 0 11 0 0 0 0 6 1 17 1 24 8 35 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc11g044457.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 *-* XP_019066414.2) Solyc11g044430.1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc11g044400.1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Pathogenesis-related thaumatin family protein (AHRD V3.3 *-* A0A2K3LJG6_TRIPR) Solyc11g044390.1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 Osmotin-like protein (AHRD V3.3 *-* Q8S4L2_SOLNI) Solyc11g044380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein, putative (DUF247) (AHRD V3.3 *-* A0A1I9LLH8_ARATH) Solyc11g044370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like (AHRD V3.3 *-* A0A1Y1I0W8_KLENI) Solyc11g044360.3 84 221 255 230 227 243 269 255 256 174 248 254 210 263 183 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** F4JSZ0_ARATH) AT4G38160 Solyc11g150134.1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc11g044340.3 1625 1385 1201 936 885 991 983 1169 1556 1065 1510 953 1346 1594 1897 Pre-mRNA-processing protein 40A (AHRD V3.3 *** A0A2U1LAQ9_ARTAN) Solyc11g044330.3 163 106 96 113 95 177 106 73 88 92 91 102 126 91 102 Zinc finger SWIM domain protein (AHRD V3.3 *** F4JJV9_ARATH) AT4G33925 Solyc11g044320.2 485 446 590 521 547 567 544 502 534 426 514 441 771 563 419 Telomere repeat-binding factor 1 (AHRD V3.3 *** A0A2G2YFA0_CAPAN) AT1G49950 Solyc11g044323.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc11g044325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PNF5_TRIPR) ATMG00240 Solyc11g044327.1 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc11g044310.2 972 770 876 756 748 711 727 690 746 584 775 699 858 974 974 Proline iminopeptidase (AHRD V3.3 *** A0A1U8GCK3_CAPAN) AT2G14260 Solyc11g044315.1 1 0 1 0 0 1 0 1 0 1 2 1 0 0 0 Unknown protein Solyc11g044280.1 205 171 141 148 126 102 128 190 318 241 139 245 234 219 81 Major facilitator superfamily (AHRD V3.3 *** A0A200Q8Q5_9MAGN) Solyc11g044270.3 232 173 223 229 247 215 222 136 210 197 203 220 179 205 208 Major facilitator superfamily protein (AHRD V3.3 *-* A0A2U1KFT1_ARTAN) Solyc11g044250.3 506 689 217 499 673 706 739 593 437 492 227 334 542 283 315 K(+) efflux antiporter 3, chloroplastic (AHRD V3.3 *** A0A1U8F6F8_CAPAN) Solyc11g044230.3 573 968 1221 1314 1577 1669 1439 1292 962 765 1818 1120 1014 1068 1811 Costars family protein (AHRD V3.3 *-* A0A1U8F9R1_CAPAN) AT4G33640 Solyc11g044235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H-like domain-containing protein (AHRD V3.3 *-* A0A2U1LG73_ARTAN) Solyc11g044220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g043210.3 1470 1638 1252 1435 1444 1629 1609 1381 1301 1221 1225 1278 1714 1456 1573 Dynamin-related protein 3B (AHRD V3.3 *-* A0A2G2Y3C9_CAPAN) Solyc11g043200.1 166 244 106 109 145 112 137 225 214 170 57 186 138 169 100 Dynamin related protein (AHRD V3.3 *-* A0A1P8AX46_ARATH) AT1G60530 Solyc11g043190.1 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Ribosomal protein L5 (AHRD V3.3 *-* A0A0C5B2C4_HYONI) Solyc11g043180.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 --* AT1G61170.1) Solyc11g043160.2 0 3 0 0 0 0 0 0 0 0 0 3 0 0 0 Endo-1,4-beta-xylanase (AHRD V3.3 *** A0A1J3CP06_NOCCA) Solyc11g043150.2 939 739 798 699 611 703 627 641 557 656 585 618 768 726 728 signal recognition particle receptor subunit beta-like (AHRD V3.3 *** A0A2I4DDJ1_9ROSI) AT5G05670 Solyc11g043130.2 1033 1238 1035 1076 1451 1450 1375 1840 1628 1522 1356 1476 951 1186 1403 Phosphatidylinositol 4-kinase alpha 1 (AHRD V3.3 *** A0A2G2VJB2_CAPBA) AT1G49340 Solyc11g043120.2 594 762 702 804 790 944 1024 996 839 730 756 823 760 778 646 Phosphatidylinositol 4-kinase (AHRD V3.3 *-* A0A1Y1IFC8_KLENI) AT1G51040 Solyc11g043110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3CYS5_CAPCH) AT1G71250 Solyc11g043100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein R3a-like protein (AHRD V3.3 *-* Q6L3G6_SOLDE) AT5G45440 Solyc11g043090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance-like protein (AHRD V3.3 *-* E3W9R6_CAPCH) Solyc11g043080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A2G2ZLS4_CAPAN) Solyc11g043070.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9R7_CAPAN) Solyc11g043060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9S0_CAPFR) Solyc11g043050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200PRW4_9MAGN) Solyc11g043040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G3BMA7_CAPCH) Solyc11g043030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9R7_CAPAN) Solyc11g043020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat (AHRD V3.3 *-* A0A200PRW4_9MAGN) Solyc11g150133.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein RRC1-like isoform X2 (AHRD V3.3 --* XP_024162854.1) Solyc11g043010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Translocase of chloroplast, chloroplastic (AHRD V3.3 *** A0A1U8DY12_CAPAN) Solyc11g043000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Translocase of chloroplast, chloroplastic (AHRD V3.3 *-* A0A2G2W9J0_CAPBA) Solyc11g042990.2 1515 1356 1085 1280 1088 1205 1139 1157 1146 1424 1421 1098 1282 1250 1250 Kinase protein (AHRD V3.3 *** A0A2R4QNE4_9POAL) AT1G71410 Solyc11g042970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2I0X8E2_9ASPA) Solyc11g042960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g042950.1 505 546 847 674 782 751 865 630 567 452 717 551 463 632 992 Xylulose kinase-1 (AHRD V3.3 *-* A0A2U1MR58_ARTAN) Solyc11g042930.2 9247 9274 9764 8524 10306 9056 8599 9600 11118 9318 8336 10000 11645 9995 8700 SKP1-like protein (AHRD V3.3 *** O82463_NICCL) AT5G42190 Solyc11g042920.3 61 85 67 70 86 86 76 94 63 45 79 76 84 116 41 40S ribosomal protein S12 (AHRD V3.3 *-* A0A2G2VG43_CAPBA) Solyc11g042910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g042890.2 31 48 146 115 141 155 180 157 54 62 134 144 60 87 88 Late embryogenesis abundant protein (AHRD V3.3 *-* A0A200QZY3_9MAGN) Solyc11g042880.3 104 148 286 162 205 327 214 285 123 121 143 258 220 257 156 Late embryogenesis abundant protein (AHRD V3.3 *** A0A200QZY3_9MAGN) AT2G41990 Solyc11g042870.1 0 0 0 1 0 1 0 3 0 1 0 0 0 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (AHRD V3.3 --* AT3G62870.1) Solyc11g042873.1 626 319 283 341 251 277 321 344 324 297 233 305 245 369 205 Non-functional NADPH-dependent codeinone reductase 2 (AHRD V3.3 *-* A0A2G3A0P9_CAPAN) Solyc11g042877.1 944 597 828 756 492 781 851 461 506 374 963 482 544 720 839 Non-functional NADPH-dependent codeinone reductase 2 (AHRD V3.3 *-* A0A2G2X821_CAPBA) Solyc11g042850.2 0 0 2 0 6 0 2 1 1 0 5 3 0 0 0 Carbohydrate kinase PfkB (AHRD V3.3 *** A0A200QYA5_9MAGN) AT4G10260 Solyc11g042853.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g042857.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc11g042820.2 34 81 166 473 55 53 70 61 62 31 225 49 42 53 109 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1PWN6_ARTAN) AT1G33440 Solyc11g042810.2 0 0 7 0 0 4 1 3 5 1 0 1 0 0 0 Hexosyltransferase (AHRD V3.3 *** A0A2G3B9M2_CAPCH) AT1G33430 Solyc11g042800.2 2 0 3 1 0 0 0 0 6 1 3 0 0 3 25 Embryonic protein DC-8 (AHRD V3.3 *-* A0A2G2XP36_CAPBA) Solyc11g042805.1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2Y582_CAPAN) Solyc11g042770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9R9_CAPCH) Solyc11g042760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *-* A0A1I9LQ33_ARATH) Solyc11g042750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9R5_CAPCH) Solyc11g042740.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g042730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9R9_CAPCH) Solyc11g042720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance-like protein (AHRD V3.3 *-* E3W9R6_CAPCH) Solyc11g042710.3 2 0 0 7 0 0 0 0 1 1 5 0 4 6 0 (+)-neomenthol dehydrogenase-like (AHRD V3.3 *-* A0A2I4HRF0_9ROSI) Solyc11g042650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g042640.2 595 1004 759 941 1478 1384 1363 1475 1024 1030 899 1048 951 790 706 Rieske (2Fe-2S) domain-containing protein (AHRD V3.3 *** Q9C9I7_ARATH) AT1G71500 Solyc11g042630.3 60 75 2 154 19 20 10 15 29 18 0 5 58 9 2 DUF506 domain-containing protein (AHRD V3.3 *** A0A1Q3CKJ0_CEPFO) Solyc11g042620.3 274 225 270 244 214 214 220 225 201 350 256 216 156 176 221 Nuclear transport factor 2 (NTF2)-like protein (AHRD V3.3 *-* Q67TV5_ORYSJ) AT1G71480 Solyc11g042610.2 746 1848 1450 1075 1413 1181 1381 1358 1032 798 883 1106 1939 1613 1068 40S ribosomal protein S5 (AHRD V3.3 *** A0A1U8EKR1_CAPAN) AT2G37270 Solyc11g150132.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g042580.1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3CM24_CAPCH) AT1G71450 Solyc11g042560.1 2 0 44 3 0 0 0 0 1 0 97 0 0 0 4 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A1U8GKH8_CAPAN) AT1G33760 Solyc11g042520.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g042500.3 99 80 105 88 100 100 120 120 110 88 84 81 81 87 101 Tubulin-folding cofactor E (AHRD V3.3 *-* A0A1U8DUT0_CAPAN) Solyc11g042470.1 244 261 246 249 243 252 270 349 318 309 181 378 251 334 188 Tubulin-folding cofactor E (AHRD V3.3 *** A0A2G2W6C5_CAPBA) AT1G71440 Solyc11g042460.2 226 282 341 398 305 332 441 325 352 342 251 245 308 319 196 Non-lysosomal glucosylceramidase (AHRD V3.3 *** A0A2I4FRE3_9ROSI) Solyc11g042450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* K4D288_SOLLC) Solyc11g042455.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 SNF1-related protein kinase regulatory subunit beta-3 (AHRD V3.3 *-* A0A2G3A5M6_CAPAN) Solyc11g042440.1 502 561 732 882 891 984 960 785 417 707 829 732 483 435 422 hypothetical protein (AHRD V3.3 *-* AT1G55365.1) AT1G55365 Solyc11g042430.2 621 646 596 694 762 700 679 787 677 707 497 783 702 732 484 Protein phosphatase methylesterase 1 (AHRD V3.3 *** A0A2G2YFH1_CAPAN) AT4G10050 Solyc11g042420.2 36 30 130 90 74 69 75 63 116 60 165 146 117 48 90 Cytochrome c (AHRD V3.3 *-* A0A314KZN8_NICAT) AT4G10040 Solyc11g040410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR protein kinase (AHRD V3.3 *-* G9BZV6_9SOLN) Solyc11g040400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DnaJ domain (AHRD V3.3 *-* A0A200QA98_9MAGN) Solyc11g040390.2 503 839 556 530 835 679 721 1014 881 733 577 787 792 855 545 Aspartokinase-homoserine dehydrogenase (AHRD V3.3 *** O65027_SOYBN) Solyc11g040380.2 268 375 526 552 544 648 743 360 293 290 506 422 456 425 447 Homoserine dehydrogenase (AHRD V3.3 *-* S8BUI7_9LAMI) Solyc11g040370.2 8571 10002 7770 8097 7271 7850 7786 7801 7584 7446 7783 7118 10236 9613 8720 RNA-binding KH domain protein (AHRD V3.3 *** A0A2K3P1D4_TRIPR) AT4G10070 Solyc11g040340.3 97 459 859 659 1214 1117 955 1099 585 534 353 848 599 1025 1471 LEE14BDGL L.esculentum endo-1,4-beta-D-glucanase AT1G22880 Solyc11g040330.2 78 140 183 143 386 344 431 370 158 168 196 142 111 139 176 Endo-1,4-beta-xylanase (AHRD V3.3 *** A0A1J3CP06_NOCCA) Solyc11g040300.2 234 95 68 74 37 67 45 29 61 72 89 70 83 86 151 Transmembrane protein (AHRD V3.3 *-* Q8GSF0_ARATH) Solyc11g040280.2 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** A0A1P8AYA0_ARATH) AT2G21540 Solyc11g150131.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g040270.1 2 1 0 0 0 0 0 5 0 0 0 2 1 0 3 Unknown protein Solyc11g040260.2 418 297 350 378 270 271 272 247 284 243 371 253 306 358 363 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2VKR4_CAPBA) AT1G10910 Solyc11g040220.2 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 Ribosomal protein L37 (AHRD V3.3 *** A0A1U8FEU1_CAPAN) Solyc11g040223.1 501 276 502 493 285 342 450 231 289 275 364 310 241 388 770 Cytochrome P450 (AHRD V3.3 *** A0A200QCI8_9MAGN) Solyc11g040225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc11g040227.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc11g040180.3 1726 947 814 812 814 841 864 831 940 971 852 879 747 903 913 mRNA capping enzyme family protein (AHRD V3.3 *** A0A2U1MNN8_ARTAN) AT3G09100 Solyc11g040170.3 524 303 203 194 279 194 185 258 292 344 148 293 230 224 194 mRNA capping enzyme family protein (AHRD V3.3 *-* A0A2U1MNN8_ARTAN) Solyc11g040173.1 845 541 289 280 585 270 314 593 519 598 192 407 324 379 375 Unknown protein Solyc11g150130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4HS67_9ROSI) Solyc11g040160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endoglucanase (AHRD V3.3 *-* Q9ZSP9_SOLLC) Solyc11g040150.2 933 1063 1802 1251 1589 1517 1475 1186 1359 1225 1739 1112 1083 1129 1430 Heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) (AHRD V3.3 *** B3H4C1_ARATH) AT5G47900 Solyc11g040140.2 2 1 0 0 3 0 0 0 0 1 0 0 2 1 6 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G3CEF2_CAPCH) AT5G13870 Solyc11g040130.2 150 217 278 304 219 278 226 223 219 242 235 245 387 310 265 SNARE associated Golgi protein (AHRD V3.3 *** A0A200QH54_9MAGN) AT1G44960 Solyc11g040120.3 1180 3777 3410 2875 4926 4677 4998 5304 4087 3021 2326 4426 3245 4373 1523 DNA helicase (AHRD V3.3 *** A0A2G2X978_CAPBA) AT1G44900 Solyc11g040110.2 1074 1402 1191 1083 1395 1145 1186 1180 1210 1182 1152 1207 2118 1631 1472 Cobalt ion binding (AHRD V3.3 *** B6SJF4_MAIZE) AT5G47870 Solyc11g040100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g040090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G2ZGC8_CAPAN) Solyc11g040080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2W5B4_CAPBA) Solyc11g040085.1 93 70 46 252 69 69 121 204 50 229 84 96 44 67 24 Unknown protein Solyc11g040060.3 142 139 110 88 103 87 112 80 102 84 50 105 73 144 57 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CEG3_CAPCH) AT4G33990 Solyc11g040065.1 105 75 148 92 41 95 87 51 52 57 131 81 89 67 105 Ribosomal protein S3 (AHRD V3.3 *-* V9P5B2_SALMI) Solyc11g040050.3 689 461 395 353 372 426 348 364 407 348 420 362 457 443 492 Transcription initiation factor TFIID subunit 15 (AHRD V3.3 *** A0A2G3CEE0_CAPCH) AT1G50300 Solyc11g040040.2 41 103 119 127 226 226 195 247 121 75 63 127 30 142 123 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1NLD8_ARTAN) AT3G19850 Solyc11g040030.3 0 1 0 4 2 0 0 0 2 2 0 1 7 4 0 Histidinol-phosphate aminotransferase (AHRD V3.3 *-* B6TRS1_MAIZE) Solyc11g040020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2U1MRA4_ARTAN) Solyc11g039980.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha (AHRD V3.3 *-* A0A2H4NB27_SOLLC) Solyc11g039970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, CCHC-type, Gag-polypeptide of LTR copia-type (AHRD V3.3 *-* A0A2U1Q4J2_ARTAN),Pfam:PF14223 Solyc11g039960.2 257 161 166 197 137 135 133 118 135 142 194 113 189 189 196 Peptidoglycan-binding LysM domain-containing protein (AHRD V3.3 *** A0A2U1KBL2_ARTAN) AT5G08200 Solyc11g039950.3 1281 1420 1370 1294 1230 1118 1094 1140 1450 1348 1396 1132 1814 1194 1104 Splicing factor 3B subunit 4 (AHRD V3.3 *-* A0A1J3HL99_NOCCA) AT4G10110 Solyc11g039930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *-* A0A200PZB1_9MAGN) Solyc11g039920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039910.2 1061 1088 890 819 758 867 776 736 708 768 648 784 1172 1113 915 Mitochondrial import inner membrane translocase subunit TIM17-2 (AHRD V3.3 *** A0A2G2X9K8_CAPBA) AT2G37410 Solyc11g039900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* A0A060D4V1_9GENT) Solyc11g039890.2 23 58 49 25 35 44 51 87 56 65 63 79 33 75 38 Nucleoporin (DUF3414) (AHRD V3.3 *-* F4JUG3_ARATH) Solyc11g039880.2 1277 1671 1237 1524 1419 1520 1559 1477 1060 971 686 1178 1487 1800 1223 Nucleoporin (DUF3414) (AHRD V3.3 *** F4JUG3_ARATH) AT4G38760 Solyc11g039850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 enhancer of mRNA-decapping protein 4-like (AHRD V3.3 *-* A0A2I4F8S0_9ROSI) Solyc11g039840.2 11067 7841 6879 7533 5409 6060 5651 5834 5857 6644 5455 5610 7965 7042 7198 Cytochrome b-c1 complex subunit Rieske, mitochondrial (AHRD V3.3 *** UCRI_SOLTU) AT5G13430 Solyc11g039830.2 1073 2102 1172 1186 1471 1430 1457 1976 1822 1327 882 1452 2023 1820 1108 Glycine--tRNA ligase (AHRD V3.3 *** A0A2G2X9C7_CAPBA) AT1G29880 Solyc11g039835.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific serine/threonine protein kinase (AHRD V3.3 *-* G4XMX2_SOLLC) Solyc11g039810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Non-specific serine/threonine protein kinase (AHRD V3.3 *-* G4XMX2_SOLLC) AT5G57565 Solyc11g039800.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A078E3L3_BRANA) Solyc11g039780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039785.1 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3L2B9_TRIPR) Solyc11g039760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *-* A0A1J6I800_NICAT) Solyc11g039765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc11g039750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB transcription factor (AHRD V3.3 *-* F1DJS4_MAIZE) Solyc11g039740.3 222 235 483 350 292 356 324 289 291 305 376 233 356 320 363 UPF0496 protein (AHRD V3.3 *** A0A1J3IUI5_NOCCA) Solyc11g039730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039713.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039717.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g042980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator-like APRR1 (AHRD V3.3 *-* A0A2G3C9E9_CAPCH) Solyc11g039690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A1U8FV93_CAPAN) Solyc11g039680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actin (AHRD V3.3 *-* Q5I2Q3_CUCME) Solyc11g039650.2 3112 4103 3325 3729 4164 4257 4654 4469 4020 3517 2866 3433 4084 4109 3141 Dynamin (AHRD V3.3 *** A0A2U1N3P9_ARTAN) AT1G10290 Solyc11g039655.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039590.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase WNK8 (AHRD V3.3 *-* A0A2G3D9V8_CAPCH) Solyc11g039570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4D7T6_SOLLC) AT4G26010 Solyc11g039573.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc11g039577.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039550.1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 Unknown protein Solyc11g039540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G2WQH4_CAPBA) Solyc11g039530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S3, chloroplastic (AHRD V3.3 *-* A0A2G2X2T3_CAPBA) Solyc11g039535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MW90_TRIPR) Solyc11g039480.1 0 2 0 1 0 4 0 1 0 0 4 1 0 1 0 Unknown protein Solyc11g039420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039410.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039370.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g038350.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g038340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g039360.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FC (AHRD V3.3 *-* A0A0C5B7H6_9SOLA) Solyc11g039350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g056540.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g056590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cellulose synthase (AHRD V3.3 *-* K4BTR6_SOLLC) Solyc11g056595.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc11g056620.3 230 125 193 125 27 18 20 21 63 192 74 57 211 186 114 hypothetical protein (AHRD V3.3 *-* AT4G12070.1) AT4G12070 Solyc11g056630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g056635.1 0 2 0 0 0 0 0 1 0 0 0 3 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc11g056640.3 212 326 436 500 556 664 634 656 324 385 418 580 166 320 288 inactive rhomboid protein (AHRD V3.3 *** AT5G12930.1) AT5G12930 Solyc11g056650.2 2071 1008 809 882 946 912 882 931 598 1150 572 704 961 1899 3325 bHLH transcription factor 096 AT1G51140 Solyc11g056660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g056670.2 1 9 0 1 7 7 0 0 8 7 0 22 3 16 6 Cytochrome P450 (AHRD V3.3 *** Q8H9C5_SOLTU) Solyc11g056680.1 1208 1279 778 1064 2399 1892 2051 2048 1654 2875 933 1327 577 862 2839 Leucine-rich repeat receptor-like protein (AHRD V3.3 *** H6V788_MALDO) AT3G20820 Solyc11g061690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Charged multivesicular body protein 1 (AHRD V3.3 *-* A0A1J3I5J5_NOCCA) Solyc11g061700.2 9 0 0 16 0 6 4 0 8 4 1 12 2 2 0 Proline-tRNA ligase (DUF1680) (AHRD V3.3 *** Q9LXU4_ARATH) AT5G12950 Solyc11g061710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g061720.1 619 906 757 1419 1632 1308 1187 1811 898 1448 840 1100 752 763 777 Serine/threonine-protein kinase UCNL (AHRD V3.3 *** A0A2G3B973_CAPCH) AT1G51170 Solyc11g061730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g061750.2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 AP2-like ethylene-responsive transcription factor PLT1 (AHRD V3.3 *** A0A2G2VMY9_CAPBA) AT1G51190 Solyc11g061755.1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) Solyc11g061760.3 140 154 146 149 186 142 167 118 149 100 215 124 195 140 159 PRELI/MSF1-like protein (AHRD V3.3 *** A0A2U1KXN1_ARTAN) AT5G13070 Solyc11g061770.2 341 439 469 485 594 573 566 486 466 370 436 356 443 363 339 Zinc finger A20 and AN1 domain stress-associated protein (AHRD V3.3 *** A0A2K3LHE7_TRIPR) AT1G51200 Solyc11g061780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g061785.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g061790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *-* A0A2U1Q2F3_ARTAN),Pfam:PF01745 Solyc11g061800.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g061810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g061813.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** B3XZI3_IPONI) Solyc11g061817.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* B3XZI4_IPONI) Solyc11g061830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g061835.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g061850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g061855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** B3XZI3_IPONI) Solyc11g061860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g061870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g061880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g061890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* Q2MHM7_PEA) Solyc11g061900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g061910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g061920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g061930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g061940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g061950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type protein 1 (AHRD V3.3 *-* A0A2U1M0J0_ARTAN) Solyc11g061960.2 50 69 63 77 46 86 91 76 208 181 213 163 101 80 106 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1MAQ3_ARTAN) AT3G20860 Solyc11g150140.1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 Serine/threonine-protein kinase Nek6 (AHRD V3.3 --* NEK6_ARATH) Solyc11g061980.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g061985.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) Solyc11g056290.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 orf187 gene product (mitochondrion) (AHRD V3.3 *-* NP_064077.1) Solyc11g056293.1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 Stomatin-like protein 2, mitochondrial (AHRD V3.3 *-* A0A2G2ZD43_CAPAN) Solyc11g056297.1 33 30 89 33 22 31 37 24 26 35 34 43 39 46 26 Unknown protein Solyc11g062010.3 4990 4888 4109 4384 4400 4437 4873 4820 6035 4571 3909 4535 3329 5042 5110 Chromatin structure-remodeling complex protein SYD (AHRD V3.3 *** A0A2G2YFV9_CAPAN) AT2G28290 Solyc11g062020.2 765 544 569 548 664 677 549 556 545 772 600 685 507 506 587 Zinc transporter ZTP29 (AHRD V3.3 *** A0A2G3B9X4_CAPCH) AT3G20870 Solyc11g062030.1 1469 730 480 684 400 342 327 359 344 740 391 541 296 521 181 Unknown protein Solyc11g062040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G2XBW1_CAPBA) Solyc11g062050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A0U1ZD57_SOLCI) Solyc11g062060.3 62 48 41 54 25 68 37 62 39 78 45 110 29 46 30 Zinc finger protein (AHRD V3.3 *** A0A200QA40_9MAGN) AT3G57670 Solyc11g062065.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) Solyc11g062070.3 1302 1319 1174 1433 1361 1229 1387 1342 1194 1238 934 1245 1085 1311 1110 Outer envelope protein 80, chloroplastic (AHRD V3.3 *** A0A2G2V0H4_CAPBA) AT5G19620 Solyc11g062100.1 111 159 122 146 142 70 89 134 202 188 70 135 107 138 79 E1-E2_ATPase domain-containing protein/HMA domain-containing protein/Hydrolase domain-containing protein (AHRD V3.3 *** A0A1Q3B5J2_CEPFO) Solyc11g062110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* A0A1U8QCC2_CAPAN) Solyc11g062130.2 5579 8978 8486 8271 10118 10400 9775 11006 9114 9456 7710 10493 8527 8936 7875 ADP/ATP translocator AT3G08580 Solyc11g062140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g062150.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* A0A2U1P7P1_ARTAN) Solyc11g062155.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MYC6_TRIPR) ATMG00240 Solyc11g062160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF4283 domain-containing protein/zf-CCHC_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3DK39_CEPFO) Solyc11g062180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2K3N2V7_TRIPR) Solyc11g062190.2 3322 6739 6001 5893 5847 6987 7250 6808 5013 5203 5268 5909 7323 6463 5834 ADP,ATP carrier protein, mitochondrial (AHRD V3.3 *** A0A2G3CB84_CAPCH) AT3G08580 Solyc11g150141.1 99 54 49 62 3 15 20 21 26 37 19 19 41 98 111 Unknown protein Solyc11g062210.2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g062220.2 924 986 571 590 713 666 617 938 1326 696 510 776 627 880 632 Zinc finger CCCH domain-containing protein 44 (AHRD V3.3 *-* A0A2G3B9D7_CAPCH) Solyc11g062240.2 2515 2064 1785 1926 1637 1870 2031 1698 1903 1663 1703 1820 1854 2254 1862 Zinc finger transcription factor 66 Solyc11g062230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g062250.2 39 72 83 74 78 73 105 64 59 53 109 55 79 70 36 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3B9A1_CAPCH) AT2G22410 Solyc11g062260.3 163 245 340 315 370 270 312 250 381 257 372 268 272 267 266 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NQN4_ARTAN) Solyc11g062270.2 1009 1981 1827 1707 2245 2027 1925 2209 2400 1717 1664 1881 2360 2046 1609 Signal recognition particle subunit SRP72 (AHRD V3.3 *** A0A2G3BDT2_CAPCH) AT1G67680 Solyc11g062280.2 133 128 194 110 132 199 174 102 106 54 159 93 136 179 157 Lactoylglutathione lyase / glyoxalase I family protein (AHRD V3.3 *** A0A2U1N9W4_ARTAN) AT1G64185 Solyc11g062290.3 80 138 174 202 188 224 269 199 186 143 138 144 174 149 165 dystroglycan-like (AHRD V3.3 --* XP_010314418.1) Solyc11g062300.3 359 303 399 397 281 331 372 193 286 253 356 228 326 335 382 proteasome-associated protein ECM29 homolog (AHRD V3.3 *-* A0A2I4FN79_9ROSI) Solyc11g062310.2 921 848 704 726 754 683 788 864 1118 911 535 825 788 978 712 proteasome-associated protein ECM29 homolog (AHRD V3.3 *** A0A2I4FN79_9ROSI) AT2G26780 Solyc11g062320.2 110 96 71 54 95 64 83 133 153 126 60 111 57 104 54 Proteasome-associated protein ECM29 (AHRD V3.3 *** A0A2K3MSJ3_TRIPR) Solyc11g062340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g062350.2 208 126 164 229 40 51 71 39 184 197 132 119 236 149 362 Blue copper protein (AHRD V3.3 *** A0A2K3N6C5_TRIPR) AT1G08500 Solyc11g062360.2 298 576 405 560 908 667 611 702 546 467 431 628 458 510 291 transferring glycosyl group transferase (AHRD V3.3 *** AT5G12260.1) AT5G12260 Solyc11g062370.1 592 660 461 332 767 513 436 747 729 551 332 578 722 576 294 Stomatal closure-related actin-binding protein 1 (AHRD V3.3 *** A0A1U8EIL0_CAPAN) Solyc11g062380.1 0 0 5 0 0 5 0 2 1 2 16 0 0 3 0 Unknown protein Solyc11g062390.3 828 721 828 787 920 1013 999 853 766 655 687 786 972 732 546 Stomatal closure-related actin-binding protein 1 (AHRD V3.3 *** A0A1U8EIL0_CAPAN) Solyc11g062400.2 149 116 198 97 48 55 55 30 94 96 212 75 102 115 159 Protein kinase APK1B, chloroplastic (AHRD V3.3 *** A0A2G3B9K0_CAPCH) Solyc11g062410.3 3756 2421 2113 2772 2758 2978 3037 2874 2440 3493 2519 3000 2014 2035 2050 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A1U8EMK5_CAPAN) AT2G26980 Solyc11g062420.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SCR-like 11 (AHRD V3.3 -** AT4G15733.1) Solyc11g062430.2 870 619 815 815 597 704 617 629 845 653 849 647 803 777 1075 COP9 signalosome complex subunit 2 (AHRD V3.3 *** A0A2G2YFE8_CAPAN) AT2G26990 Solyc11g062440.2 1029 3210 4033 3655 4485 3953 3925 5624 3428 3578 2580 3396 4440 3334 1530 L-ascorbate oxidase (AHRD V3.3 *** ASO_TOBAC) AT5G21105 Solyc11g063440.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L20, chloroplastic (AHRD V3.3 *** A0A2P1M7F3_9LAMI) ATCG00660 Solyc11g061840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g063460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA),Pfam:PF01745 Solyc11g063470.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g063480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g063490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g056260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g063530.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc11g063540.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 RNA-dependent RNA polymerase (AHRD V3.3 *-* A0A2Z6JIR4_9VIRU) Solyc11g063550.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g063570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g063573.1 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ATPase subunit 4 (AHRD V3.3 *** A0A0C5B288_HYONI) ATMG00640 Solyc11g063577.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A142DP97_9LAMI) Solyc11g063590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g063600.3 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Ribosomal protein S10 (AHRD V3.3 *** Q36552_SOLTU) Solyc11g063610.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Cytochrome c oxidase subunit 1 (AHRD V3.3 *** A0A2G2YXI2_CAPAN) Solyc11g063620.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *** A0A0C5B9X0_9SOLA) Solyc11g063630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *** A0A0C5B9X0_9SOLA) ATMG00960 Solyc11g063640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g063650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g063660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L20, chloroplastic (AHRD V3.3 *** A0A2P1M7F3_9LAMI) ATCG00660 Solyc11g063670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *-* A0A2U1KGG4_ARTAN) Solyc11g063680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g063690.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g063700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *-* A0A2G2WHN5_CAPBA) Solyc11g063710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g063720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50S ribosomal protein L20, chloroplastic (AHRD V3.3 *** A0A2P1M7F3_9LAMI) ATCG00660 Solyc11g063730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 tRNA isopentenyltransferase (AHRD V3.3 *-* A0A2U1Q2F3_ARTAN),Pfam:PF01745 Solyc11g063740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenylate isopentenyltransferase (AHRD V3.3 *** A0A2G2WHN5_CAPBA) Solyc11g063743.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g063747.1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc11g064750.3 18 24 38 25 28 27 26 15 10 26 17 2 23 9 8 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PRW4_9MAGN) AT2G42920 Solyc11g064760.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9R7_CAPAN) Solyc11g064770.3 0 0 3 0 0 0 0 0 1 0 0 0 0 7 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *** E3W9R5_CAPCH) Solyc11g064775.1 0 0 0 0 0 1 0 0 0 0 1 0 0 4 0 CC-NBS-LRR protein (AHRD V3.3 *-* A6YP83_SOLTU) Solyc11g064780.2 2 1 4 5 0 4 0 6 7 7 1 3 4 1 2 F-box family protein (AHRD V3.3 *** I0J3I6_ARAHH) Solyc11g064790.2 840 1318 1398 1174 1450 1427 1414 1462 1412 1394 1130 1977 1916 1815 1434 Signal peptide peptidase (AHRD V3.3 *** A0A2G2VN53_CAPBA) AT2G03120 Solyc11g064800.3 607 626 1034 1118 861 879 641 679 658 697 1033 938 694 758 1068 Protein LATERAL ROOT PRIMORDIUM 1 (AHRD V3.3 *** A0A2G3B9J0_CAPCH) AT5G12330 Solyc11g064830.2 947 745 755 893 800 703 664 676 887 1278 893 817 690 724 767 RING/U-box superfamily protein (AHRD V3.3 *** AT5G19430.6) AT5G19430 Solyc11g064840.1 23 142 91 125 177 121 115 110 160 120 137 110 203 126 183 Calcium-dependent lipid-binding domain-containing protein (AHRD V3.3 *** A0A2K3NHM7_TRIPR) AT5G12300 Solyc11g064845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3K6K4_NOCCA) Solyc11g064850.2 675 689 606 568 798 844 745 761 1019 738 790 671 1035 633 566 Hyp O-arabinosyltransferase-like protein (AHRD V3.3 *** AT5G13500.3) AT5G13500 Solyc11g064880.2 565 676 647 630 541 665 664 721 751 596 525 637 603 756 644 Rho GTPase-activating protein 7 (AHRD V3.3 *** A0A2G2YFL1_CAPAN) AT5G19390 Solyc11g064890.2 2063 1552 1584 1544 1137 1323 1303 1196 1453 2008 2239 1155 1882 1664 1682 hypoxia-induced protein L31 AT1G63500 Solyc11g064900.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent protein kinase (AHRD V3.3 *** B2KTB3_WHEAT) AT5G12180 Solyc11g064920.2 465 308 265 300 200 183 190 235 356 405 338 344 432 366 455 Dihydropyrimidinase (AHRD V3.3 *** A0A1U8EK03_CAPAN) AT5G12200 Solyc11g064930.3 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 sorbin/SH3 domain protein (AHRD V3.3 *-* AT5G09960.3) Solyc11g064940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g064945.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc11g064950.3 1889 1059 1034 830 624 766 734 657 932 1228 1074 907 1162 1059 746 BZIP transcription factor (AHRD V3.3 *** B8A1K4_MAIZE) AT5G06950 Solyc11g064960.2 13 7 4 3 2 9 2 0 2 2 2 6 2 5 25 Vacuolar iron transporter-like protein 3 (AHRD V3.3 --* A0A1U8HM14_CAPAN) Solyc11g064980.1 1 11 4 6 8 0 0 4 0 2 12 0 2 7 27 Unknown protein Solyc11g064990.2 0 0 0 2 0 0 0 7 2 3 0 7 2 0 4 Heat shock transcription factor (AHRD V3.3 *** S8CNQ2_9LAMI) Solyc11g065000.2 871 874 519 885 647 798 863 722 737 676 578 456 687 493 665 F-box protein (AHRD V3.3 *** A0A2G2YFL9_CAPAN) AT2G32560 Solyc11g065010.1 21 7 0 2 0 0 0 0 0 0 0 0 19 10 5 Estrogen receptor beta-1 like (AHRD V3.3 *-* A0A2R6PFF8_ACTCH) Solyc11g065020.3 101 78 52 76 59 48 63 62 66 71 46 78 49 54 41 GDP-mannose transporter GONST1 (AHRD V3.3 *-* A0A2G2YFN8_CAPAN) Solyc11g065030.3 383 249 324 314 225 253 266 191 136 180 325 194 265 325 318 GDP-mannose transporter (AHRD V3.3 *** A0A1B0VP09_ARATH) Solyc11g065040.2 135 179 166 199 205 234 237 207 144 119 134 207 243 296 275 Protein N-lysine methyltransferase METTL21A (AHRD V3.3 *** A0A2U1MC47_ARTAN) AT2G26810 Solyc11g065050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc11g065060.1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 3 Unknown protein Solyc11g065070.2 1912 1130 1149 1117 655 644 652 542 1139 1403 1747 903 1277 1363 2217 Hydroxymethylglutaryl-CoA lyase, mitochondrial (AHRD V3.3 *** A0A2G3B9F8_CAPCH) AT2G26800 Solyc11g065080.2 156 186 148 161 132 144 103 187 189 164 179 186 229 238 158 S2 self-incompatibility locus-linked pollen 3.2 protein (AHRD V3.3 *-* Q7XAE8_PETIN) AT5G12240 Solyc11g065090.2 344 393 365 312 334 452 536 346 350 250 412 294 345 283 297 magnesium transporter NIPA (DUF803) (AHRD V3.3 *** AT4G13800.8) Solyc11g065100.3 1078 810 822 663 707 651 659 656 716 759 871 652 656 705 774 Mitochondrial fission 1 protein (AHRD V3.3 *** A0A1U8FH57_CAPAN) Solyc11g065110.2 1034 996 852 838 854 1009 893 1017 1090 877 849 928 1104 1129 812 Homeobox domain-containing protein (AHRD V3.3 *** A0A1Q3B258_CEPFO) AT4G03250 Solyc11g065120.3 944 678 738 857 726 760 720 688 758 672 750 688 783 930 749 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein (AHRD V3.3 *** F4K149_ARATH) AT5G19420 Solyc11g150142.1 50 45 68 51 48 67 63 55 46 32 46 58 52 51 72 reactive oxygen species modulator 1 (AHRD V3.3 *** A0A2I4FIE9_9ROSI) Solyc11g065160.3 1315 1064 1006 1023 1039 1044 1186 1235 1377 1021 737 1185 939 1190 957 Zinc finger protein (AHRD V3.3 *** A0A200QMM1_9MAGN) AT5G12400 Solyc11g065180.2 1757 1403 895 775 757 653 708 850 857 708 634 719 1220 1033 834 THUMP domain-containing protein (AHRD V3.3 *** A0A2U1LRX8_ARTAN) AT5G12410 Solyc11g065190.3 81 881 718 848 1868 1503 1621 2282 706 414 566 985 128 462 300 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200PMH3_9MAGN) AT1G50490 Solyc11g065200.1 4 0 0 2 1 2 3 4 2 1 0 2 1 0 0 Unknown protein Solyc11g065205.1 25 49 52 48 32 72 45 43 42 21 34 39 35 36 31 Transposase, Ptta/En/Spm (AHRD V3.3 *-* A0A2U1QKM9_ARTAN) Solyc11g065210.3 605 844 813 956 990 1135 1083 813 651 552 858 585 803 965 925 Ubiquitin carboxyl-terminal hydrolase 24 (AHRD V3.3 *** A0A2G3B9K1_CAPCH) AT4G30890 Solyc11g065220.2 422 209 614 182 308 410 486 355 288 327 563 295 187 226 214 Phosphotransferase (AHRD V3.3 *** A0A2G2YFN7_CAPAN) AT1G50460 Solyc11g065240.2 285 209 190 240 250 247 254 270 285 178 207 173 184 286 348 Saccharopine dehydrogenase (AHRD V3.3 *** A0A2K3NVD5_TRIPR) AT1G50450 Solyc11g065250.1 39 38 39 25 17 34 20 10 37 20 20 26 38 37 6 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QHA2_9MAGN) AT5G39680 Solyc11g065260.3 971 822 723 656 574 607 659 632 730 621 723 563 661 783 857 DnaJ domain-containing protein/TPR_1 domain-containing protein/TPR_11 domain-containing protein (AHRD V3.3 *** A0A1Q3BB58_CEPFO) AT5G12430 Solyc11g065270.2 335 521 445 439 450 407 434 533 532 330 367 386 664 575 491 copper ion binding protein (AHRD V3.3 *** AT4G12340.1) AT4G12340 Solyc11g065280.1 1 2 3 0 0 0 0 3 5 17 0 0 5 1 0 beta-1,3-glucanase Solyc11g065290.1 0 0 2 2 5 0 0 0 0 0 0 0 0 0 0 glucan endo-1,3-beta-glucosidase-like (AHRD V3.3 *** A0A2I4F1I5_9ROSI) Solyc11g065300.1 0 1 0 9 0 0 0 0 0 0 0 0 0 0 0 Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A2G3DF69_CAPCH) Solyc11g065310.3 0 0 3 0 0 0 1 0 0 0 3 3 0 0 0 Unknown protein Solyc11g065320.2 8603 8628 7493 8859 10333 10567 10276 10456 8959 9227 8843 9331 9443 8090 7162 Zinc finger transcription factor 67 AT5G12440 Solyc11g065330.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g065340.2 435 265 207 279 66 81 84 63 241 260 148 168 252 273 288 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3I9M9_9ROSI) Solyc11g065350.2 610 705 780 907 352 530 383 393 883 635 855 680 709 679 990 ABC transporter G family member 12 (AHRD V3.3 *** A0A2G3B9R8_CAPCH) AT3G21090 Solyc11g065360.2 116 75 124 143 95 146 138 115 116 93 145 116 51 95 18 ABC transporter G family member 13 (AHRD V3.3 *** A0A2G2YFU0_CAPAN) Solyc11g065365.1 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 Unknown protein Solyc11g065370.3 1382 1134 1774 1331 1439 1880 1482 1383 1502 884 2095 1276 1546 1516 1671 Set1/Ash2 histone methyltransferase complex subunit ASH2 (AHRD V3.3 *-* A0A1J3EKD3_NOCCA) AT1G51450 Solyc11g065380.2 239 205 200 193 130 129 115 124 174 127 98 163 183 149 104 G-patch domain (AHRD V3.3 *** A0A200Q889_9MAGN) AT3G57910 Solyc11g065390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CIC6_CEPFO) AT5G12460 Solyc11g065400.2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CIC6_CEPFO) AT5G12460 Solyc11g065410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g065420.3 294 202 319 220 169 212 189 91 149 75 325 110 219 303 476 Unknown protein Solyc11g150143.1 7 7 4 18 6 7 14 8 8 21 12 13 16 24 13 Unknown protein Solyc11g065440.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CIC6_CEPFO) AT5G12460 Solyc11g065450.1 0 2 0 1 0 0 2 1 0 0 0 5 1 0 0 DUF604 domain-containing protein (AHRD V3.3 *-* A0A1Q3CIC6_CEPFO) Solyc11g065460.1 0 2 0 13 0 4 4 7 2 3 1 0 0 2 8 DUF604 domain-containing protein (AHRD V3.3 *-* A0A1Q3CIC6_CEPFO) Solyc11g065470.2 3 0 7 0 1 7 7 1 3 6 0 1 3 0 15 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CIC6_CEPFO) AT5G12460 Solyc11g065480.3 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CIC6_CEPFO) AT5G12460 Solyc11g065490.2 2092 3263 2565 2874 2816 2656 2891 2930 2235 2500 1944 2648 3548 3192 2541 protein RETICULATA-RELATED 4, chloroplastic-like (AHRD V3.3 *** A0A2I4G748_9ROSI) AT5G12470 Solyc11g065520.1 63 125 199 287 27 12 16 25 106 125 73 237 211 218 334 Ribonuclease H (AHRD V3.3 *-* A0A2K3L3V1_TRIPR) Solyc11g065530.1 224 182 102 177 78 62 40 56 164 72 83 119 301 186 288 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1P0Y5_ARTAN) AT1G51440 Solyc11g065540.1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 NAC domain protein (AHRD V3.3 *-* S5RDR3_9ROSA) Solyc11g065550.1 14 10 13 16 7 13 6 15 6 16 7 10 11 19 3 Unknown protein Solyc11g065555.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc11g065590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G2WUD6_CAPBA) Solyc11g065600.2 122 110 48 93 28 21 23 12 76 55 122 71 75 144 161 xyloglucan endotransglucosylase-hydrolase 4 Solyc11g065610.1 3 3 5 1 4 5 10 1 4 8 15 2 6 1 27 Vacuolar ATPase assembly integral membrane protein VMA21 homolog (AHRD V3.3 *-* A0A1U8E863_CAPAN) Solyc11g065620.2 1287 2084 1974 2309 2337 2020 2106 2342 2666 1740 2051 2005 3029 2595 2287 Sulfite reductase (AHRD V3.3 *** H6WYS2_SOLLC) AT5G04590 Solyc11g065630.3 30 107 129 124 530 504 547 499 178 56 249 276 54 126 145 myosin-like protein (AHRD V3.3 *** AT1G51405.1) AT1G51405 Solyc11g065640.2 486 532 441 364 378 355 448 321 342 273 311 329 404 456 473 2Fe-2S ferredoxin (AHRD V3.3 *** A0A2G3B9S5_CAPCH) AT4G05450 Solyc11g065650.1 21 26 19 30 16 51 39 41 2 18 43 17 19 35 32 12-oxophytodienoate reductase 1 (AHRD V3.3 *-* A0A2G3BQL3_CAPCH) Solyc11g065660.2 354 619 712 642 673 671 665 636 650 536 561 630 828 836 496 Calcium-dependent protein kinase (AHRD V3.3 *** B2KTB2_WHEAT) AT5G12480 Solyc11g065670.1 1016 2223 1926 1672 2086 1860 1981 2064 1627 1258 1297 1739 2912 2159 1656 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) AT5G60670 Solyc11g065680.1 304 170 259 161 120 143 109 113 124 197 138 133 100 188 215 transmembrane protein (AHRD V3.3 *** AT2G01870.1) AT2G01870 Solyc11g065690.3 941 746 681 552 495 521 545 527 542 784 658 645 680 704 696 Unknown protein Solyc11g065700.2 1303 645 428 379 292 354 314 264 387 390 320 352 659 494 574 Nuclear transcription factor Y subunit A-9 (AHRD V3.3 *** A0A2G2YFZ7_CAPAN) AT5G12840 Solyc11g065710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter (AHRD V3.3 *** A0A200PUK8_9MAGN) Solyc11g065720.2 0 0 0 6 2 4 1 3 0 0 1 4 0 0 13 ABC transporter (AHRD V3.3 *-* A0A200Q3R5_9MAGN) Solyc11g065730.3 2781 2339 1718 1274 1714 1417 1230 2094 1678 1835 1540 1832 2104 1937 1677 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4IWB2_ARATH) AT3G20890 Solyc11g065740.2 139 143 197 235 208 238 233 226 172 227 188 200 190 129 162 Chaperonin-like RbcX (AHRD V3.3 *** A0A200R9J6_9MAGN) AT5G19855 Solyc11g065750.2 3815 3357 3053 2886 3720 3939 3522 3348 2630 3004 2648 2949 2682 2933 2882 Armadillo repeat-containing protein 8-like (AHRD V3.3 *** A0A2K3NUY2_TRIPR) AT1G51350 Solyc11g065760.2 29 185 312 256 320 343 284 287 174 197 199 319 76 182 126 TK1-like deoxyribonucleoside kinase AT3G07800 Solyc11g065770.1 1 0 0 0 0 0 0 0 0 0 2 0 0 0 10 Cytochrome P450 (AHRD V3.3 *** A0A200Q4A2_9MAGN) Solyc11g065780.3 28 8 18 25 20 17 24 18 20 13 22 22 11 9 17 CC-NBS-LRR type resistance-like protein (AHRD V3.3 *-* E3W9R6_CAPCH) Solyc11g065790.1 19 22 4 5 17 29 23 16 24 18 11 6 18 11 13 Disease resistance protein I2 (AHRD V3.3 *-* Q9XET3_SOLLC) Solyc11g065810.1 1024 646 924 970 637 726 876 579 374 749 735 700 560 768 610 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9S0_CAPFR) Solyc11g065820.3 507 307 124 354 62 86 113 89 151 288 142 89 239 177 413 Protein DETOXIFICATION (AHRD V3.3 *** S6BP63_TOBAC) AT1G51340 Solyc11g065830.2 549 1612 567 1058 2369 2576 2155 2400 860 768 386 694 1346 673 486 Dicarboxylate transporter 1, chloroplastic (AHRD V3.3 *** A0A2G2VN77_CAPBA) AT5G12860 Solyc11g065835.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g065840.3 0 4 2 23 8 13 11 15 11 5 7 3 4 10 11 R2R3MYB transcription factor 46 AT3G08500 Solyc11g150144.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 4 (AHRD V3.3 --* A0A1J3E2E4_NOCCA) Solyc11g065870.3 440 418 435 395 394 433 386 410 498 401 330 393 419 458 425 GTPase Der (AHRD V3.3 *** A0A2G2VNZ8_CAPBA) AT3G12080 Solyc11g065880.2 956 1045 862 814 916 1087 898 1094 790 816 667 875 1118 956 805 RNA-binding protein (AHRD V3.3 *** A0A2K3PBB6_TRIPR) AT5G19350 Solyc11g065890.2 62 79 86 99 82 119 120 99 72 55 68 60 92 111 94 1-acyl-sn-glycerol-3-phosphate acyltransferase (Putative) (AHRD V3.3 *** Q40119_LIMDO) Solyc11g065900.2 838 865 1076 1030 912 966 1149 808 813 763 1123 865 846 937 1130 DNA replication complex GINS protein SLD5 (AHRD V3.3 *** A0A328DQ87_9ASTE) AT5G49010 Solyc11g065910.1 3 3 4 2 0 0 0 4 2 2 0 3 10 0 0 extensin-2-like (AHRD V3.3 *** XP_019066504.1) Solyc11g065920.2 2174 1715 1434 1711 1216 1115 1221 1373 1909 1714 983 1176 2248 1936 1736 Xanthine dehydrogenase (AHRD V3.3 *** A0A2G2VNZ2_CAPBA) AT4G34890 Solyc11g065930.3 1475 5220 3117 3581 3628 3717 4641 3909 13837 8880 8998 10438 4852 6189 5713 Xanthine dehydrogenase (AHRD V3.3 *** A0A2G2VNZ2_CAPBA) AT4G34890 Solyc11g065935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) ATMG00810 Solyc11g065940.2 75 40 25 58 25 26 23 25 27 23 29 21 58 38 224 ENTH/VHS-like protein (AHRD V3.3 *** A0A2U1LWI0_ARTAN) AT3G46540 Solyc11g065950.3 792 506 430 409 298 303 305 286 352 507 377 353 543 555 683 Protein kinase domain (AHRD V3.3 *** A0A200R6I6_9MAGN) Solyc11g065960.3 142 70 52 27 65 50 49 75 48 60 20 42 64 54 80 U3 small nucleolar ribonucleoprotein IMP4 (AHRD V3.3 *-* A0A1U8ESL4_CAPAN) Solyc11g065970.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Laccase (AHRD V3.3 *-* A0A1U8H2F1_CAPAN) Solyc11g065980.3 903 593 630 558 467 547 551 421 392 431 459 363 612 618 651 U3 small nucleolar ribonucleoprotein imp4 (BRIX domain-containing protein) (AHRD V3.3 *** A0A166XUR7_9PEZI) Solyc11g065990.2 79 107 84 118 108 116 127 141 117 71 102 104 115 106 95 Actin (AHRD V3.3 *** A0A2G2VVS8_CAPBA) Solyc11g066000.1 177 207 191 233 309 272 268 240 212 160 219 216 159 227 207 cyclin-dependent protein kinase inhibitor SMR3-like (AHRD V3.3 *-* A0A2I4FWF9_9ROSI) AT5G59360 Solyc11g066005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-directed DNA polymerase (AHRD V3.3 *-* A0A2I0XJN1_9ASPA),Pfam:PF17919 Solyc11g066010.2 89 156 322 288 247 287 228 208 205 169 234 332 80 196 273 60S ribosomal protein L36 (AHRD V3.3 *** AT5G02440.1) AT5G02440 Solyc11g066020.2 2427 3158 4605 4031 4172 4891 5638 3830 4733 3297 5148 5626 2310 3803 5527 Ankyrin repeat family protein, putative, expressed (AHRD V3.3 *** Q10NB7_ORYSJ) AT2G28840 Solyc11g066030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g066040.2 368 365 414 352 429 371 324 410 368 456 280 307 471 357 226 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VNZ4_CAPBA) AT3G46510 Solyc11g066050.1 656 746 626 527 665 537 630 557 588 631 790 471 662 632 556 Dof zinc finger protein DOF2.4 (AHRD V3.3 *** A0A2G2VP28_CAPBA) Solyc11g066060.3 14830 20865 8232 7384 16586 13668 13206 16644 10378 6515 5032 9365 20669 15330 6208 70 kDa heat shock protein (AHRD V3.3 *** Q943K7_ORYSJ) AT3G12580 Solyc11g066070.2 230 292 400 271 370 439 346 256 227 217 323 191 411 395 421 hypothetical protein (AHRD V3.3 *** AT1G47278.3) AT1G47278 Solyc11g066080.2 343 414 661 608 539 532 516 498 304 262 635 481 417 506 464 transmembrane protein (AHRD V3.3 *** AT5G59350.1) AT5G59350 Solyc11g066090.1 176 145 204 158 143 165 156 172 131 140 189 140 165 155 233 FYD (AHRD V3.3 *** AT3G12570.4) Solyc11g066100.2 1274 428 410 260 205 159 170 153 305 236 124 247 295 289 244 Heat shock protein 70 (AHRD V3.3 *** S8C6K2_9LAMI) Solyc11g066110.2 2027 1535 1411 1518 1685 1412 1303 1668 1822 2282 1472 1797 1005 1203 1614 Membrane insertase OXA1/ALB3/YidC (AHRD V3.3 *** A0A200R6K9_9MAGN) AT2G28800 Solyc11g066120.3 34 43 53 69 28 44 29 39 32 42 75 17 48 34 174 CLAVATA3/ESR (CLE)-related protein 46-like (AHRD V3.3 -** XP_022878632.1) Solyc11g066130.1 10388 21368 23405 25114 49771 41849 41485 59191 20640 28297 17533 45052 24351 23501 9349 osmotin AT2G28790 Solyc11g066140.2 0 2 6 10 13 2 2 3 1 5 5 3 9 1 4 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein (AHRD V3.3 *** A0A200R6L7_9MAGN) AT2G28780 Solyc11g066150.3 122 136 117 132 48 72 51 83 92 140 78 88 288 93 229 UDP-glucuronic acid decarboxylase (AHRD V3.3 *** G5DXR5_SILLA) AT2G28760 Solyc11g066160.1 87 448 384 337 536 675 461 575 263 319 279 678 156 366 148 Histone H4 (AHRD V3.3 *-* A0A2P6TCF4_CHLSO) AT1G07660 Solyc11g066163.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc11g066165.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance protein 1 (AHRD V3.3 *-* A0A2G2WU09_CAPBA) Solyc11g066167.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MUX8_TRIPR) Solyc11g066240.3 379 185 195 353 277 269 259 299 255 291 193 283 214 249 210 replication factor-A carboxy-terminal domain protein (AHRD V3.3 *** AT2G28105.2) AT2G28105 Solyc11g066250.2 3 5 9 15 0 0 0 0 9 1 14 2 4 4 24 Carboxypeptidase (AHRD V3.3 *** A0A1U8EWA6_CAPAN) AT3G45010 Solyc11g066255.1 5 16 25 12 10 7 9 21 9 3 23 6 19 19 2 Unknown protein Solyc11g066260.2 206 192 229 191 211 203 221 230 223 157 231 240 309 252 197 Vacuolar sorting-associated protein 24-like (AHRD V3.3 *** A0A2K3P7F2_TRIPR) AT5G22950 Solyc11g066270.3 2 4 0 1 1 0 1 1 7 0 0 0 21 5 113 xyloglucan endotransglucosylase-hydrolase 6 Solyc11g066280.3 2904 2102 1566 1191 1070 977 1041 1037 1264 1439 972 1168 1980 1651 1549 ribosome production factor 1 (AHRD V3.3 *** A0A2I4FRK6_9ROSI) AT4G01560 Solyc11g066290.2 3370 2139 1236 1478 1250 1220 1117 1387 1937 1581 1408 1358 2084 1975 1730 Phosphatase DCR2 (AHRD V3.3 *** B6TXQ1_MAIZE) AT5G63140 Solyc11g066300.3 433 425 443 790 517 497 530 679 534 938 451 690 407 533 433 CRS2-associated factor 2, chloroplastic (AHRD V3.3 *** A0A2G3BBG2_CAPCH) AT1G23400 Solyc11g066310.2 219 157 188 285 259 324 363 276 160 179 252 212 195 175 164 transmembrane protein (AHRD V3.3 *** AT1G10660.4) Solyc11g066320.2 1316 1620 2591 1577 3402 3882 3979 3102 1289 1018 2861 1790 1141 1520 1003 Exostosin family protein (AHRD V3.3 *** A0A2U1P7C1_ARTAN) AT2G28110 Solyc11g066325.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g066330.2 197 168 169 180 133 219 162 172 213 149 279 132 169 233 269 Major facilitator superfamily (AHRD V3.3 *** A0A2U1Q7R9_ARTAN) Solyc11g066340.2 298 310 231 250 331 382 359 329 213 145 187 233 171 284 118 actin protein 2/3 complex subunit-like protein (AHRD V3.3 *** AT2G28130.1) AT2G28130 Solyc11g066350.2 98 549 982 988 1898 1943 1598 1771 794 396 766 1008 203 491 403 shugoshin-1-like (AHRD V3.3 *** A0A2I4EHP2_9ROSI) AT3G44960 Solyc11g066360.2 567 908 2264 2101 1772 2005 1611 1577 1168 768 1753 1998 1232 1636 1976 Enabled-like protein (DUF1635) (AHRD V3.3 *** F4KBD8_ARATH) AT5G22930 Solyc11g066370.2 1168 1712 1377 1379 1812 1766 1751 1938 1499 1291 1178 1691 1640 1743 1269 DNA ligase (AHRD V3.3 *** A0A1U8EV20_CAPAN) AT1G08130 Solyc11g066380.3 461 673 992 944 1092 1190 1213 1083 970 667 1035 913 648 878 565 Protein UPSTREAM OF FLC (AHRD V3.3 *** A0A2G2VLG2_CAPBA) AT2G28150 Solyc11g066390.2 395 586 904 1092 524 631 506 355 1395 1059 980 1676 605 1412 501 superoxide dismutase 3 AT2G28190 Solyc11g066400.1 41 28 64 31 11 7 6 14 21 11 33 3 38 22 19 Zinc finger protein (AHRD V3.3 *** A0A200R5F9_9MAGN) AT2G28200 Solyc11g066410.2 298 769 953 890 993 964 1056 900 936 404 803 705 640 795 763 50S ribosomal protein L9 (AHRD V3.3 *** B4FU53_MAIZE) AT3G44890 Solyc11g066420.1 13 13 29 6 1 0 4 3 11 25 12 5 15 5 0 Zinc finger protein STAR3 (AHRD V3.3 *** A0A2G3BBB9_CAPCH) AT5G22890 Solyc11g066430.2 176 2686 2434 2466 3506 3318 3092 4120 2068 1467 1706 3401 681 2250 947 histone H2B Solyc11g066440.2 475 601 301 487 777 723 665 774 510 564 354 363 440 394 304 lethal leaf spot 1 AT3G44880 Solyc11g066450.2 311 250 211 199 207 286 218 241 145 193 157 216 220 152 281 transmembrane protein (AHRD V3.3 *** AT5G22875.3) AT5G22875 Solyc11g066460.1 484 697 670 1051 1166 902 1257 1672 752 821 623 961 832 956 454 Unknown protein Solyc11g066470.1 472 1209 1705 1765 2043 2133 2277 1855 1150 753 2014 1594 910 1129 1455 Unknown protein Solyc11g066480.2 960 1239 1291 1165 1093 1388 1370 1387 1340 1161 984 1252 1326 1389 1091 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein (AHRD V3.3 *** F4IHN9_ARATH) AT2G27980 Solyc11g066490.1 250 308 559 542 297 301 236 246 326 485 547 204 302 326 251 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** A0A2U1PPK6_ARTAN) AT5G22870 Solyc11g066500.2 631 636 695 687 539 735 722 619 845 597 726 635 703 834 772 Ring/U-Box superfamily protein (AHRD V3.3 *-* F4IHN6_ARATH) Solyc11g066510.3 98 35 22 41 47 31 36 31 68 76 38 40 62 35 59 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1KVX7_ARTAN) AT2G27940 Solyc11g066520.3 93 211 229 166 355 324 289 354 272 152 162 218 182 116 105 Carboxypeptidase (AHRD V3.3 *** A0A2G2YH94_CAPAN) AT2G27920 Solyc11g066530.3 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 Unknown protein Solyc11g066540.2 827 993 892 1078 1051 1053 1062 1222 1166 1070 955 1051 982 900 936 Unknown protein Solyc11g066560.3 510 613 339 503 541 517 587 610 592 469 379 523 453 572 412 Vacuolar protein sorting-associated protein 41 homolog (AHRD V3.3 *** A0A2G2YHK9_CAPAN) AT1G08190 Solyc11g066570.1 0 3 0 0 0 1 0 0 0 0 0 0 1 0 0 Unknown protein Solyc11g066580.3 101 397 202 150 72 105 119 107 658 182 91 521 1006 614 882 Flavonoid 3`,5`-hydroxylase (AHRD V3.3 *** D3W9H7_SOLLC) Solyc11g066590.2 66 43 46 34 8 14 17 14 20 20 24 19 90 70 105 Serine carboxypeptidase S28 family protein (AHRD V3.3 *** A0A2U1Q514_ARTAN) AT5G22860 Solyc11g066600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine carboxypeptidase S28 family protein (AHRD V3.3 *** A0A2U1Q514_ARTAN) AT5G22860 Solyc11g066610.2 126 180 163 180 181 167 203 168 196 137 161 145 226 259 187 ATPase complex subunit (AHRD V3.3 *** Q0WRX7_ARATH) AT1G08220 Solyc11g066620.2 1576 1054 1541 914 653 672 615 520 899 1010 1271 652 1920 1112 1059 aspartic proteinase-like protein 2 (AHRD V3.3 *** A0A1U7W5P3_NICSY) AT5G22850 Solyc11g066630.2 1011 1324 1228 907 894 957 852 866 787 683 720 694 1439 1178 1138 Unknown protein Solyc11g066640.1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Transferase (AHRD V3.3 *** A0A200R9R6_9MAGN) Solyc11g066650.3 657 856 567 423 724 691 614 637 495 472 497 602 661 723 407 SRSF protein kinase 1 (AHRD V3.3 *** A0A1U8EV86_CAPAN) AT3G44850 Solyc11g066660.3 2588 2157 1195 2596 3065 3998 3674 2119 1854 2266 1650 1938 1449 1102 1636 Magnesium transporter MRS2-A, chloroplastic (AHRD V3.3 *** A0A2G2YHE9_CAPAN) AT5G22830 Solyc11g066670.1 892 7181 2540 6202 5264 4435 3983 5229 12927 12405 7359 23929 7035 8369 3338 Glycosyltransferase (AHRD V3.3 *** A0A288W8G2_GARJA) Solyc11g066680.1 469 1229 562 1607 841 648 712 912 1741 2483 964 2286 985 1156 702 Glycosyltransferase (AHRD V3.3 *** A0A288W8G2_GARJA) Solyc11g066685.1 8 5 1 10 8 19 23 17 18 11 14 2 4 18 19 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NBQ9_TRIPR) Solyc11g066690.2 109 289 307 305 275 341 277 275 146 203 281 324 353 268 122 RecQ-mediated instability-like protein (AHRD V3.3 *** Q8RX36_ARATH) AT1G08390 Solyc11g066700.2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G2VQ31_CAPBA) AT5G22810 Solyc11g066710.3 4 6 2 5 26 18 13 18 1 4 19 2 1 1 0 Phospholipid:diacylglycerol acyltransferase (AHRD V3.3 *** A0A2U1LAW7_ARTAN) AT3G44830 Solyc11g066720.3 954 2640 2127 2680 2263 2148 2184 2092 4606 3346 4131 3261 3587 2845 4072 UDP-apiose/UDP-xylose synthase (AHRD V3.3 *** A0A1B3TP38_SPIPO) AT1G08200 Solyc11g066730.2 464 487 457 546 345 453 474 401 380 364 460 406 418 481 679 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2VQ29_CAPBA) AT3G44820 Solyc11g066740.2 192 210 143 174 168 156 171 166 166 153 95 152 208 211 184 protein RETICULATA, chloroplastic-like (AHRD V3.3 *** A0A2I4ELL8_9ROSI) AT5G22790 Solyc11g066770.3 1017 1296 1562 1422 1569 1346 1764 1293 1299 1006 1633 1061 1498 1239 1412 AP-2 complex subunit alpha (AHRD V3.3 *** A0A2G2VQ36_CAPBA) AT5G22770 Solyc11g066780.3 521 745 833 773 955 1092 1058 865 823 617 889 764 719 906 790 PHD finger family protein (AHRD V3.3 *** A0A2U1MW38_ARTAN) AT5G22760 Solyc11g066790.2 260 416 434 341 446 407 517 406 311 279 279 361 284 461 365 SNF2-related (AHRD V3.3 *** A0A200R575_9MAGN) AT5G22750 Solyc11g066800.2 29 15 16 12 1 11 9 15 43 60 48 40 36 35 1 GABA transporter 1 (AHRD V3.3 *** A0A2G3BB89_CAPCH) AT1G08230 Solyc11g066810.2 1 0 0 1 0 1 1 3 2 1 0 3 0 3 0 Unknown protein Solyc11g066820.2 1507 4138 3213 4375 5081 4799 5095 4506 5963 4677 4185 3842 4147 3289 5423 Glucomannan 4-beta-mannosyltransferase 2 (AHRD V3.3 *** A0A1U8HBW8_CAPAN) AT5G22740 Solyc11g066830.2 1760 1076 1467 1143 1174 1058 1063 1008 1590 1131 1083 1107 1273 1191 1082 Zinc finger transcription factor 68 AT1G27650 Solyc11g066840.3 10892 15478 9640 7046 8400 9665 8200 8450 6224 5869 7439 7849 19917 14867 10929 Histone deacetylase HDT1 (AHRD V3.3 *** A0A2G2VQ39_CAPBA) Solyc11g066850.3 324 216 194 224 186 159 166 195 203 345 117 160 128 249 105 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VQ41_CAPBA) AT2G15820 Solyc11g066860.2 59 138 68 94 246 210 228 165 183 122 220 94 98 88 168 hypothetical protein (AHRD V3.3 *** AT2G27830.1) AT2G27830 Solyc11g066870.3 1232 2275 2232 2038 2067 2057 2069 2129 1953 1230 1648 1791 2065 2575 1825 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein (AHRD V3.3 *** AT5G22640.1) AT5G22640 Solyc11g066880.2 0 2 1 4 0 0 0 0 1 0 8 2 0 0 0 Phytosulfokines 2 (AHRD V3.3 *** A0A2G2VX66_CAPBA) AT3G44735 Solyc11g066890.1 581 1700 1077 1200 2259 2182 2027 2022 1756 1503 1396 2089 1197 1313 661 Arogenate dehydratase (AHRD V3.3 *** A0A2G3BBC7_CAPCH) AT2G27820 Solyc11g066900.2 889 1156 1357 1154 1572 1806 1662 1445 1262 1045 1065 1214 908 981 885 Nucleobase-ascorbate transporter 12 (AHRD V3.3 *** A0A2G2YHB3_CAPAN) AT2G27810 Solyc11g066910.3 798 658 639 641 584 477 557 472 564 856 756 627 555 604 798 Syntaxin (AHRD V3.3 *** A0A2G3C7Q3_CAPCH) AT5G46860 Solyc11g066920.1 88 148 102 123 104 90 108 143 98 57 78 72 113 150 56 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0VP48_9ASPA) Solyc11g066930.1 15 59 107 44 120 107 101 94 135 27 95 72 107 111 31 DUF868 domain-containing protein (AHRD V3.3 *** A0A1Q3B4B3_CEPFO) AT2G27770 Solyc11g066940.2 11 24 65 44 32 17 19 31 26 23 4 49 37 38 26 hypothetical protein (AHRD V3.3 *** AT3G44716.2) AT3G44716 Solyc11g066950.2 256 1048 830 1284 1847 1780 2080 1422 522 401 894 783 934 904 1163 Stress responsive A/B barrel domain-containing protein (AHRD V3.3 *** A0A2K3N653_TRIPR) AT5G22580 Solyc11g066960.3 271 173 177 214 178 179 224 118 165 122 150 116 180 204 154 tRNA dimethylallyltransferase 2 (AHRD V3.3 *** A0A1U8EYX8_CAPAN) AT2G27760 Solyc11g066970.3 98 74 224 193 180 128 108 125 128 87 257 111 87 65 81 Transcriptional activator (DUF662) (AHRD V3.3 *** Q3EBM1_ARATH) AT2G27740 Solyc11g066990.2 1764 1404 1234 1286 1170 1209 1148 1223 1639 1259 1134 1275 1340 1714 1513 XS domain (AHRD V3.3 *-* A0A200PZP0_9MAGN) Solyc11g067000.3 0 1 0 0 0 0 0 0 5 0 0 0 0 3 0 Pleiotropic drug resistance protein 2 (AHRD V3.3 *** A0A2G2VQM0_CAPBA) Solyc11g067010.2 1977 1018 1086 688 478 526 526 389 664 675 865 715 727 731 1189 Protein BUD31-like protein (AHRD V3.3 *** A0A1U8EQ97_CAPAN) Solyc11g067020.3 1496 902 968 946 886 867 893 820 884 1006 807 833 1088 1062 1117 Histone deacetylase (AHRD V3.3 *** A0A1U8EJW4_CAPAN) AT3G44680 Solyc11g067030.2 78 166 146 172 149 165 160 142 81 59 107 125 122 144 102 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** AT3G24560.3) Solyc11g067040.2 33 69 33 56 44 36 69 59 52 28 28 64 43 49 44 tRNA(Ile)-lysidine synthase (AHRD V3.3 *** A0A1J3CXQ9_NOCCA) AT3G24560 Solyc11g067050.4 1058 1087 1418 1347 1705 1883 1870 1640 1413 990 1339 1211 1276 1440 1330 Alkaline/neutral invertase (AHRD V3.3 *** A0A0X8AZR5_CAMSI) Solyc11g067060.3 218 178 320 301 304 302 366 258 338 287 304 347 262 304 290 Protein-tyrosine phosphatase (AHRD V3.3 *** Q67YE7_ARATH) AT3G44620 Solyc11g067070.1 698 320 510 462 264 290 305 243 261 248 352 297 245 357 368 Protein kinase G11A (AHRD V3.3 *** A0A2G2YHE2_CAPAN) Solyc11g067080.3 2853 2691 2694 3313 3915 3503 2971 4089 3291 3462 2973 3314 3271 2698 2270 Serine/threonine-protein kinase D6PKL2 (AHRD V3.3 *** A0A2G2YHG1_CAPAN) Solyc11g067090.2 1096 1088 877 886 1053 1119 1125 1071 801 827 734 815 995 1135 926 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A2I0V8M0_9ASPA) AT3G44600 Solyc11g067100.2 2214 3354 3331 2590 3213 3467 3244 3337 2270 1962 2218 2647 3547 3050 2682 60S acidic ribosomal protein family (AHRD V3.3 *-* F4IGR3_ARATH),Pfam:PF00428 AT2G27710 Solyc11g067110.2 13 48 44 26 65 64 95 140 104 52 27 100 31 73 30 DNA polymerase epsilon catalytic subunit (AHRD V3.3 *-* A0A2G2YHJ1_CAPAN) Solyc11g067140.2 421 703 837 960 913 1237 1236 1026 953 646 721 976 630 1149 788 DNA polymerase epsilon catalytic subunit (AHRD V3.3 *** A0A2G2VQQ6_CAPBA) Solyc11g067150.2 135 111 143 116 98 100 94 96 95 72 98 75 132 132 192 transmembrane protein (AHRD V3.3 *** AT4G04190.1) AT4G04190 Solyc11g067160.2 502 367 374 354 309 350 381 343 364 397 311 309 254 267 203 Aldo/keto reductase family oxidoreductase (AHRD V3.3 *** A0A2K3NWG7_TRIPR) AT2G27680 Solyc11g067170.3 17 8 60 30 19 26 15 18 15 13 7 6 0 14 12 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A2G2XZ88_CAPAN) Solyc11g067180.2 3 1 0 1 2 2 5 0 1 3 5 3 2 2 1 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A2G2XZ88_CAPAN) Solyc11g067190.3 7 20 20 7 18 16 19 12 54 29 9 17 0 15 4 Fatty acyl-CoA reductase (AHRD V3.3 *** A0A2G3BAW0_CAPCH) AT4G33790 Solyc11g067200.2 2687 2214 2186 2063 1899 1940 2024 1662 1682 1871 2080 1846 2065 2109 2035 Protein HIRA (AHRD V3.3 *** A0A2G2VQ12_CAPBA) AT3G44530 Solyc11g067210.1 78 83 52 62 35 71 66 85 88 33 48 48 55 88 47 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3BAW8_CAPCH) AT2G27610 Solyc11g067220.2 43 38 69 50 5 42 43 16 24 24 34 25 40 46 61 Unknown protein Solyc11g067230.2 960 1306 1013 1076 1566 1540 1392 1729 1354 1137 1091 1517 1446 1367 908 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** A0A2I0VAX0_9ASPA) AT2G27600 Solyc11g067240.2 1159 1073 1325 1283 1569 1443 1445 1456 1184 1251 1071 1259 1159 1242 1246 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** A0A2I0VAX0_9ASPA) AT2G27600 Solyc11g067250.3 61 18 15 20 2 2 1 0 2 7 24 4 6 79 111 Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A2G2Y1R0_CAPAN) AT5G22470 Solyc11g067260.3 439 344 256 352 163 129 145 148 327 345 389 187 465 425 573 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LHG4_ARTAN) AT5G22460 Solyc11g067270.1 0 6 0 3 3 1 9 3 5 7 5 2 2 3 0 Acylsugar acyltransferase 3 (AHRD V3.3 *** A0A0B5JFF6_SOLHA) Solyc11g067280.2 2181 2311 2688 2295 2534 2229 2310 1948 2022 1773 2631 1787 3074 2571 2354 MYB transcription factor (AHRD V3.3 *** V5Q0T6_9CARY) AT2G01060 Solyc11g067290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc11g067300.2 159 217 217 215 86 180 150 150 153 92 238 122 192 244 202 ABC transporter B family member (AHRD V3.3 *** A0A2K3NLX3_TRIPR) Solyc11g067310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter B family member 12 (AHRD V3.3 *** A0A2G3A4I9_CAPAN) Solyc11g067320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A1Q3AUR5_CEPFO) AT1G18590 Solyc11g067330.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Acylsugar acyltransferase 3 (AHRD V3.3 *** A0A0B5J4M4_SOLHA) Solyc11g067340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acylsugar acyltransferase 3 (AHRD V3.3 *** A0A0B5J4M4_SOLHA) Solyc11g067343.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *** A0A1Q3AUR5_CEPFO) Solyc11g067345.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3DEI6_NOCCA) Solyc11g067347.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acylsugar acyltransferase 3 (AHRD V3.3 *** A0A0B5J050_SOLHA) Solyc11g068350.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g068360.1 582 563 595 858 751 909 904 716 618 655 911 693 588 652 738 CC-NBS-LRR type resistance protein (AHRD V3.3 *** E3W9S1_CAPBA) Solyc11g068370.3 10 7 8 10 5 1 2 2 4 10 10 13 7 7 0 Transcription factor (AHRD V3.3 *** A0A2R4QNU7_9POAL) Solyc11g068380.1 8 19 10 3 6 0 4 2 18 7 7 10 4 8 3 hypothetical protein (AHRD V3.3 *-* AT3G52740.1) AT3G52740 Solyc11g068390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *-* AT3G52740.1) AT3G52740 Solyc11g068400.2 159 498 492 394 571 489 492 404 439 274 301 342 590 526 419 Cytochrome b-c1 complex subunit 9 (AHRD V3.3 *** A0A2G2VPU7_CAPBA) AT3G52730 Solyc11g068410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Unknown protein Solyc11g068420.2 1977 4040 4312 3457 4821 5157 5245 4439 2526 2364 3288 3392 4074 3763 3171 Ribosomal protein (AHRD V3.3 *** Q6ER67_ORYSJ) AT1G08360 Solyc11g068430.3 774 1049 1344 941 956 874 914 1035 1048 1211 1556 598 1276 884 993 Ferredoxin (AHRD V3.3 *** K4DA01_SOLLC) Solyc11g068440.2 225 156 641 346 62 71 60 67 272 347 754 100 177 177 688 Glucan endo-1,3-beta-glucosidase 11 (AHRD V3.3 *** A0A2G3BAW5_CAPCH) AT2G27500 Solyc11g068450.2 49 74 134 99 95 80 94 70 84 84 120 89 54 61 67 Biogenesis of lysosome-related organelles complex 1 subunit 1 (AHRD V3.3 *** A0A2G2VPV1_CAPBA) AT2G30330 Solyc11g068460.2 137 119 106 122 101 120 136 120 133 159 113 145 150 127 52 Calcium-binding EF-hand family protein (AHRD V3.3 *** A0A2U1NS17_ARTAN) Solyc11g068470.3 141 112 83 136 85 86 81 103 84 100 103 91 99 157 83 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2VPW6_CAPBA) Solyc11g068480.2 394 766 941 771 1015 1152 1134 979 711 506 842 886 705 837 734 DNA polymerase epsilon subunit 3 (AHRD V3.3 *** A0A2I4DV53_9ROSI) AT2G27470 Solyc11g068490.1 387 514 1000 657 813 864 955 641 816 426 1080 606 849 788 1013 Ribosomal protein L31 (AHRD V3.3 *** AT5G55125.2) AT5G55125 Solyc11g068500.2 1157 1375 1113 1361 1383 1321 1606 1354 1267 1425 1153 1366 1503 1407 1295 Sec23/sec24 transport family protein (AHRD V3.3 *** G5DW78_SILLA) AT2G27460 Solyc11g068510.2 738 1292 2305 2011 2137 2231 2315 1824 1306 1063 2201 1434 1741 1868 2167 copper ion binding protein (AHRD V3.3 *** AT2G27730.4) AT2G27730 Solyc11g068515.1 493 884 1418 1118 1216 1431 1466 1065 1301 898 1435 1176 794 709 1210 Unknown protein Solyc11g068520.3 378 407 454 380 694 603 583 685 597 568 366 542 448 405 425 Rho GTPase-activating protein 1 (AHRD V3.3 *** A0A2G2YH67_CAPAN) AT5G22400 Solyc11g068530.1 14 21 26 19 19 27 22 5 14 12 0 10 18 5 20 The fantastic four family (AHRD V3.3 *-* A0A200QHM9_9MAGN) AT1G22110 Solyc11g068540.2 1117 1044 1249 1301 965 851 875 1017 1480 1147 1324 1297 1042 1305 1519 beta-alanine synthase AT2G27450 Solyc11g068550.1 614 707 889 887 748 648 699 780 754 883 1025 920 629 613 732 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9M287_ARATH) AT3G44380 Solyc11g068560.2 9 11 23 12 9 9 10 9 8 10 2 8 10 5 12 Unknown protein Solyc11g068570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Germin (AHRD V3.3 *** A0A2U1N8J1_ARTAN) Solyc11g068580.1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 Germin (AHRD V3.3 *** A0A200QHN6_9MAGN) Solyc11g068590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Germin (AHRD V3.3 *** A0A200QHW9_9MAGN) Solyc11g068600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Germin (AHRD V3.3 *** A0A2U1N8J1_ARTAN) Solyc11g068610.2 339 476 274 488 421 392 455 460 379 469 287 386 439 393 385 Arp2/3 complex 34 kDa subunit (AHRD V3.3 *** A0A1U8EJK3_CAPAN) AT1G30825 Solyc11g068620.2 147 30 36 29 0 0 0 0 5 13 73 0 81 161 134 NAC domain (AHRD V3.3 *** A0A200Q6H1_9MAGN) AT5G22380 Solyc11g068625.1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 Unknown protein Solyc11g068640.2 2252 2100 1766 1691 2064 1922 1903 2194 2107 1983 1645 1702 1834 1957 1934 Protein TPLATE (AHRD V3.3 *** A0A1U8EJ68_CAPAN) AT3G01780 Solyc11g068650.2 503 495 355 406 482 414 432 424 404 344 474 357 599 554 358 Mitochondrial fission protein ELM1 (AHRD V3.3 *** A0A2G3BB38_CAPCH) AT5G22350 Solyc11g068660.2 1732 1630 1415 1590 1390 1712 1607 1496 1778 1698 1522 1556 1495 1585 1526 OTU domain-containing protein (AHRD V3.3 *** A0A1Q3D2E3_CEPFO) AT2G27350 Solyc11g068670.2 1418 2021 1953 1659 1786 1874 1871 1882 1668 1697 1261 1701 2384 1960 1834 Nicalin (AHRD V3.3 *** A0A2I4G6J6_9ROSI) AT3G44330 Solyc11g068680.2 110 263 243 348 321 306 397 269 294 194 260 248 226 272 257 NF-kappa-B inhibitor-like protein (AHRD V3.3 *** AT5G22340.1) AT5G22340 Solyc11g068690.2 652 630 559 442 519 395 446 371 416 356 570 467 669 694 605 Plant intracellular ras-group-related lrr protein 4 (AHRD V3.3 *-* A0A314KZJ1_NICAT) AT5G22320 Solyc11g068700.2 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g068710.3 681 299 373 110 57 75 59 26 164 103 2589 192 221 407 944 F-box family protein (AHRD V3.3 *-* A0A2U1LJ24_ARTAN) Solyc11g068720.2 299 479 472 383 522 636 575 510 634 290 574 449 404 469 459 Plant/F24K9-26 protein (AHRD V3.3 *** A0A072UED0_MEDTR) Solyc11g068730.2 918 766 578 574 841 772 744 885 708 780 494 700 498 570 370 Nitrilase (AHRD V3.3 *** G4VV63_CAMSI) AT5G22300 Solyc11g068740.2 2173 1583 1612 1196 1829 1677 1656 1757 1327 1633 1595 1469 1640 1265 1525 Methyl-CpG-binding domain protein 2 (AHRD V3.3 *** A0A2G2V439_CAPBA) AT3G46580 Solyc11g150145.1 58 57 88 94 55 82 60 43 53 31 59 41 80 68 117 methyl-CpG-binding domain-containing protein 5 (AHRD V3.3 --* NP_001316316.1) Solyc11g068750.2 626 303 176 242 206 228 224 160 212 299 237 229 291 317 350 NAC domain-containing protein 89 (AHRD V3.3 *** A0A2G2YH79_CAPAN) AT2G27300 Solyc11g068760.2 361 368 395 411 362 427 357 305 318 345 370 277 420 414 404 hyaluronan mediated motility receptor-like protein (AHRD V3.3 *** AT5G06265.9) AT3G44280 Solyc11g068770.1 184 326 691 260 258 187 164 171 279 247 663 238 387 309 368 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1M9A7_ARTAN) AT5G22250 Solyc11g068780.1 2 5 10 15 16 3 3 10 12 5 8 0 10 3 4 ovate family protein 30 Solyc11g068790.2 125 147 169 104 121 109 86 81 173 134 75 156 155 105 97 FAM210B-like protein%2C putative (DUF1279) (AHRD V3.3 *** AT2G27290.1) AT2G27290 Solyc11g068800.2 409 459 523 455 548 567 609 537 451 361 573 506 494 559 493 Transcription factor E2FB (AHRD V3.3 *** A0A2G2YH44_CAPAN) AT5G22220 Solyc11g068810.2 149 168 132 175 210 195 210 180 177 182 185 150 108 131 151 aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B (AHRD V3.3 *** AT5G22210.2) AT5G22210 Solyc11g068820.3 700 1949 2004 1533 2432 2096 2183 2564 1880 1409 1549 1573 1191 1646 1545 50S ribosomal protein L27 (AHRD V3.3 *** Q8LEF5_ARATH) AT5G40950 Solyc11g068830.2 2741 4258 4476 4684 3797 3669 3802 3620 3419 3067 3054 3499 5183 4543 5562 Uridine 5'-monophosphate synthase (AHRD V3.3 *** A0A1U8EL35_CAPAN) AT3G54470 Solyc11g068840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/threonine-protein phosphatase 7 long form homolog (AHRD V3.3 *-* XP_019066952.1) Solyc11g068870.2 1110 666 631 502 513 555 471 481 593 650 542 644 562 578 550 nuclear speckle splicing regulatory protein 1-like (AHRD V3.3 *** A0A2I4FDM8_9ROSI) AT2G27285 Solyc11g068880.2 114 130 97 206 166 146 116 142 113 88 43 174 63 134 92 aspartic proteinase nepenthesin-2-like (AHRD V3.3 *-* A0A1U7WNC2_NICSY) Solyc11g068890.2 820 1991 1876 3990 4703 3800 3545 6022 3295 3399 2361 4976 2398 3703 603 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** Q9C568_ARATH) AT3G44220 Solyc11g068893.1 93 97 128 159 110 129 142 83 90 70 98 119 56 112 49 Late embryogenesis abundant hydroxyproline-rich glycoprotein (AHRD V3.3 *-* A0A2K3L117_TRIPR) AT2G27260 Solyc11g068897.1 0 1 0 0 0 0 1 0 0 0 2 0 1 1 5 Unknown protein Solyc11g068900.1 613 697 726 545 725 566 634 798 678 842 730 818 844 658 573 Late embryogenesis abundant hydroxyproline-rich glycoprotein (AHRD V3.3 *-* A0A2K3L117_TRIPR) AT2G27260 Solyc11g068905.1 3 3 0 4 19 11 7 7 2 3 0 18 0 1 9 Unknown protein Solyc11g068910.3 155 277 360 350 479 449 394 461 317 159 309 374 237 336 230 Methyl-CpG-binding domain-containing protein 11 (AHRD V3.3 *** A0A2G2YH09_CAPAN) Solyc11g068920.1 2 0 0 0 1 1 0 2 3 0 19 5 0 0 4 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VPU6_CAPBA) Solyc11g068930.3 394 505 568 508 603 667 645 561 504 491 521 616 506 541 529 Ubiquitin-like modifier-activating enzyme atg7 (AHRD V3.3 *** A0A2G3BAU2_CAPCH) AT5G45900 Solyc11g068940.1 3 3 0 0 0 0 0 0 22 8 7 0 0 11 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VPS7_CAPBA) Solyc11g068950.3 7001 4060 3107 4556 1157 1344 1319 1120 3561 4300 4810 2532 4865 5376 6325 BEL1-like homeodomain protein 1 (AHRD V3.3 *** A0A2G2YH01_CAPAN) Solyc11g068960.2 5410 4607 3114 3680 2608 2982 2852 2669 4388 5133 3490 2875 6310 4611 4564 Transcription factor LHW (AHRD V3.3 *** A0A2G3ATR4_CAPCH) AT2G27230 Solyc11g068970.2 14 60 2 35 0 4 9 3 9 32 36 14 24 9 12 Aluminum-activated malate transporter 1 (AHRD V3.3 *** A0A2G2YH04_CAPAN) AT1G08440 Solyc11g068980.2 318 564 593 514 485 578 675 469 380 327 410 386 741 552 410 Mitochondrial import inner membrane translocase subunit TIM22 (AHRD V3.3 *** A0A2K3PIN2_TRIPR),Pfam:PF02466 AT3G10110 Solyc11g068990.3 620 576 573 460 406 489 469 399 431 382 539 339 693 667 709 Nicotinamide N-methyltransferase-like (AHRD V3.3 *** A0A200Q954_9MAGN) AT1G08125 Solyc11g069000.2 4356 4983 3504 2908 3594 3343 3216 3912 3416 2713 2669 3502 4441 4066 3793 T-complex protein 1 subunit beta (AHRD V3.3 *** A0A2G2YHG6_CAPAN) AT5G20890 Solyc11g069010.2 1527 1338 1534 1443 1169 1131 1102 1343 1114 2049 1285 1221 1648 1245 1159 Alpha-L-fucosidase 1 (AHRD V3.3 *** A0A2U1M8T1_ARTAN) AT2G28100 Solyc11g069020.3 232 129 106 96 28 14 16 20 97 177 63 33 126 92 63 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc11g069030.3 267 229 293 212 366 326 249 331 147 440 252 439 358 236 166 blind AT2G36890 Solyc11g069040.3 602 754 671 837 921 791 853 766 775 644 741 689 993 907 915 glyoxalase 1 AT1G08110 Solyc11g069050.2 1198 743 521 717 688 511 581 572 620 683 331 576 723 603 682 4-coumarate--CoA ligase-like 7 (AHRD V3.3 *** A0A1U8ELY2_CAPAN) AT4G05160 Solyc11g069055.1 0 0 5 4 0 0 0 1 1 0 1 2 0 3 0 Heavy metal-associated isoprenylated plant protein 3 (AHRD V3.3 *** A0A1J6K683_NICAT) Solyc11g069060.1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 heavy metal-associated isoprenylated plant protein 3-like (AHRD V3.3 *** A0A1U8EI84_CAPAN) Solyc11g069070.3 349 776 2264 521 812 855 808 735 894 819 2520 673 1377 821 882 Heavy metal-associated isoprenylated plant protein (AHRD V3.3 *-* A0A2R6PEW2_ACTCH) Solyc11g069080.3 227 176 140 124 119 150 131 124 98 138 186 109 111 158 194 Ribosomal L18p/L5e family protein (AHRD V3.3 *-* AT3G45020.4) Solyc11g069090.2 21165 21039 21142 21793 20256 24071 21168 18879 21811 17508 20052 20030 21465 23264 23274 ATP-binding ABC transporter (AHRD V3.3 *** X8JTB2_9HOMO) AT5G60790 Solyc11g069093.1 30 24 50 61 30 43 20 23 12 26 71 52 16 82 24 SAUR-like auxin-responsive protein family (AHRD V3.3 *-* A0A2U1P7J4_ARTAN) AT2G28085 Solyc11g150146.1 1676 4088 5436 5314 4483 6188 6932 3723 1914 1870 4523 2885 5766 5254 5318 Elongation factor 1-alpha (AHRD V3.3 *** A0A1U8EL12_CAPAN) Solyc11g069097.1 2211 5280 6192 5125 5123 6105 6315 4344 3029 2520 4602 3494 7656 6471 6670 Elongation factor 1-alpha (AHRD V3.3 *** A0A1U8EL12_CAPAN) Solyc11g069110.2 19 24 33 32 40 39 38 36 31 7 26 33 28 27 26 hypothetical protein (AHRD V3.3 -** AT5G60400.3) AT5G60400 Solyc11g069115.1 21 23 42 45 78 72 66 85 32 20 55 56 55 50 6 hypothetical protein (AHRD V3.3 -** AT5G60400.3) AT5G60400 Solyc11g069120.1 46 38 35 59 60 49 60 44 41 49 47 36 32 47 39 F-box protein (AHRD V3.3 *** A0A1J3IP34_NOCCA) AT5G03970 Solyc11g069130.2 81 66 58 28 51 57 44 39 49 49 55 40 70 39 38 Unknown protein Solyc11g069140.2 472 268 331 344 315 402 393 243 205 233 494 249 245 245 386 Unknown protein Solyc11g069150.3 1021 1397 1023 1166 1553 1462 1479 1728 1353 1120 983 1318 1628 1421 998 Proteasome subunit beta (AHRD V3.3 *** A0A2G3BBI0_CAPCH) AT1G56450 Solyc11g069160.3 4030 2229 2259 2312 1725 2045 2138 1778 2188 2540 2353 2215 1753 2244 2549 SUMO E3 ligase SIZ1 (AHRD V3.3 *** A0A0X9AQ43_SOLLC) AT5G60410 Solyc11g069170.2 1859 1649 1185 1276 1381 1270 1452 1358 1099 1420 1023 1463 1258 1220 892 Cytochrome B561, amino-terminal protein (AHRD V3.3 *** Q9LN10_ARATH) AT1G07970 Solyc11g069180.2 454 255 152 269 269 192 207 167 278 326 196 228 329 326 344 Isovaleryl-CoA dehydrogenase (AHRD V3.3 *** B4FQ64_MAIZE) AT3G45300 Solyc11g069190.2 2088 4419 3030 4127 4855 5418 5353 5393 4303 2021 2723 3923 3858 4276 3297 auxin response factor 4 AT5G60450 Solyc11g069200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g069210.2 8 35 30 80 62 64 49 45 41 22 65 71 15 39 1 microtubule-associated futsch-like protein (AHRD V3.3 *-* AT5G62550.1) Solyc11g069220.2 14 4 9 0 1 0 0 0 0 2 0 0 4 13 8 MLO-like protein (AHRD V3.3 *** K4DA78_SOLLC) AT1G61560 Solyc11g069230.3 192 124 130 158 177 103 154 111 121 96 181 172 146 158 186 Syntaxin-73 (AHRD V3.3 *** A0A2G2YHV2_CAPAN) Solyc11g069240.2 46 73 70 173 815 828 636 719 26 42 55 91 134 50 70 Protein indeterminate-domain 2 (AHRD V3.3 *** A0A2G3BBG6_CAPCH) Solyc11g069250.2 8 160 55 152 236 153 249 178 56 43 79 102 58 43 142 Fasciclin-like arabinogalactan protein 12 (AHRD V3.3 *** A0A1J6K653_NICAT) AT5G03170 Solyc11g069260.2 68 103 88 166 121 185 174 123 139 86 158 107 147 149 159 ABC transporter ATP-binding protein (AHRD V3.3 *** A0A1E7VIK9_9BURK) AT4G33460 Solyc11g069270.2 379 1245 1210 2003 1798 1841 2088 1945 2133 1191 1397 1266 928 1073 2539 beta-galactosidase 5 AT2G28470 Solyc11g069280.2 0 2 0 1 1 0 0 0 0 0 1 0 1 0 0 Late embryogenesis abundant (LEA) protein-related protein (AHRD V3.3 *** A0A2U1KMH6_ARTAN) AT5G60520 Solyc11g069290.2 213 352 317 347 363 327 318 346 302 242 283 323 410 481 397 Pyridoxal 5'-phosphate synthase subunit PdxT (AHRD V3.3 *** A0A1V4EC63_9ACTN) AT5G60540 Solyc11g069300.2 595 693 911 728 916 997 1054 926 736 620 865 657 713 723 929 Serine/threonine-protein kinase GRIK2 (AHRD V3.3 *-* A0A1U8EV59_CAPAN) Solyc11g069320.1 153 176 297 265 232 328 279 233 228 161 232 198 224 226 210 F-box/kelch-repeat protein (AHRD V3.3 *** A0A1J3IN02_NOCCA) AT5G60570 Solyc11g069330.1 4217 2386 1990 3453 2408 3090 2862 2360 3281 4796 4129 3400 2979 3168 4438 Peptide upstream protein (AHRD V3.3 *** Q9LFH7_ARATH) AT3G53400 Solyc11g069340.2 3837 2709 1862 1865 1709 1595 1683 1754 1996 2389 1985 2091 2185 2293 2325 Zinc finger transcription factor 69 AT2G28450 Solyc11g069350.2 276 432 369 479 509 528 535 508 250 269 330 228 371 400 708 Zinc finger, RING-CH-type, Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *** A0A2U1QK69_ARTAN) AT5G60580 Solyc11g069360.2 320 273 256 179 132 135 111 124 218 165 144 125 306 251 181 Threonylcarbamoyl-AMP synthase (AHRD V3.3 *** A0A2V5CV63_9RHIZ) AT5G60590 Solyc11g069370.3 533 591 650 545 572 637 638 542 511 368 602 474 530 573 484 RuvB-like helicase (AHRD V3.3 *** A0A328CVU0_9ASTE) AT5G22330 Solyc11g069380.2 3755 4609 3144 3490 4487 3952 3989 4625 6975 5967 5251 6636 4161 4384 3475 GcpE AT5G60600 Solyc11g069390.1 20 85 64 70 162 136 124 123 67 46 106 54 28 50 62 arabinogalactan protein 1 (AHRD V3.3 *** XP_004251131.1) AT3G45230 Solyc11g069400.2 3163 3392 2186 1815 2182 1819 1675 2501 2629 3106 1505 2687 3658 2956 1897 Protein disulfide-isomerase (AHRD V3.3 *** A0A2G2VQ98_CAPBA) AT5G60640 Solyc11g069410.2 405 510 942 852 849 829 837 675 599 564 840 619 817 772 859 zinc finger%2C C3HC4 type family protein (AHRD V3.3 *** AT2G28430.1) AT2G28430 Solyc11g069420.2 37 147 186 255 183 155 144 148 231 127 140 109 141 162 186 transmembrane protein (AHRD V3.3 *** AT2G28410.1) AT2G28410 Solyc11g069430.2 2249 2098 2320 2402 833 974 840 896 1439 1087 2374 705 612 736 1692 plasma membrane intrinsic protein 2.6 AT3G53420 Solyc11g069440.1 1341 2408 2303 1736 2499 2283 2137 2596 1946 1304 1459 1860 2886 2509 1748 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) AT5G60670 Solyc11g069450.1 1462 567 954 690 348 317 256 194 323 689 1087 293 355 415 1009 Senescence regulator S40 (AHRD V3.3 *** A0A200QID2_9MAGN) AT5G60680 Solyc11g069460.2 2981 3318 3183 3284 3382 3532 3017 4117 2852 3176 3274 3850 3257 3168 2264 Double-stranded RNA-binding protein 2 (AHRD V3.3 *** A0A2G2VQC6_CAPBA) AT2G28380 Solyc11g069470.3 2461 2149 1948 2281 1694 1952 1795 1834 1649 1428 1273 1829 1533 2092 1735 Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H962_ZINVI) AT5G60690 Solyc11g069480.2 617 521 722 623 656 780 778 625 512 665 767 600 533 565 572 CASP-like protein (AHRD V3.3 *** A0A328CZH9_9ASTE) AT2G28370 Solyc11g069490.3 2563 2224 2014 1911 1836 1749 1781 2076 2258 2056 1580 1940 2267 2303 1855 SIT4 phosphatase-associated family protein (AHRD V3.3 *** A0A2U1PT03_ARTAN) AT1G07990 Solyc11g069500.2 1678 1079 1352 1436 941 1162 1152 1009 1068 1132 1328 1271 1055 1248 1279 Auxin Response Factor 10A AT2G28350 Solyc11g069510.3 871 1139 1088 955 963 1076 1200 1160 1065 939 1110 1146 1110 1083 845 GATA transcription factor 8 (AHRD V3.3 *** A0A2G3BBK7_CAPCH) Solyc11g069520.2 822 731 892 785 765 835 903 653 734 738 945 615 649 744 871 Protein-tyrosine sulfotransferase (AHRD V3.3 *** A0A2G3BBR2_CAPCH) AT1G08030 Solyc11g069530.2 1341 818 800 894 731 757 840 749 702 1029 976 732 618 807 1064 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A1J3FC31_NOCCA) AT2G28320 Solyc11g069540.3 4 54 35 57 71 51 37 35 36 41 55 19 5 15 58 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2U1QP35_ARTAN) AT2G28315 Solyc11g069550.1 340 477 699 637 578 589 501 557 515 459 439 512 650 608 551 Lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** A0A1P8AMP7_ARATH) AT1G08040 Solyc11g069560.2 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 glycosyltransferase family protein 2 (AHRD V3.3 *** AT5G60700.2) AT5G60700 Solyc11g069570.2 145 216 168 268 209 269 182 218 135 82 143 157 292 188 157 Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** A0A2G2YHS4_CAPAN) Solyc11g069580.2 171 85 82 129 59 62 70 28 85 73 107 55 86 131 113 Cyclic nucleotide-gated channel 15 (AHRD V3.3 *** A0A2U1M7X5_ARTAN) AT2G28260 Solyc11g069590.2 67 348 360 487 756 691 747 685 296 214 323 398 185 246 489 Receptor-like serine/threonine-protein kinase NCRK (AHRD V3.3 *** A0A2G3BBL7_CAPCH) AT2G28250 Solyc11g069600.2 1118 1713 2037 1857 2383 2378 2322 2157 2182 1253 2311 1475 1443 1303 945 Zinc finger C3HC4 type (RING finger) protein (AHRD V3.3 *** A0A2K3NPY3_TRIPR) AT5G60710 Solyc11g069610.3 1991 1406 1546 1416 1191 1344 1181 1138 1172 1498 1445 1345 1424 1554 1493 Helicase protein MOM1 (AHRD V3.3 *-* A0A1J3ISZ3_NOCCA) Solyc11g069620.3 397 305 348 800 408 346 348 314 255 463 357 281 341 348 355 CC-NBS-LRR type resistance protein (AHRD V3.3 *** E3W9R5_CAPCH) AT3G14470 Solyc11g069625.1 21 40 65 37 14 40 48 29 29 23 48 30 40 39 84 Unknown protein Solyc11g069630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidoglycan-binding lysin domain-containing protein (AHRD V3.3 *** A0A2U1NKN6_ARTAN) Solyc11g069640.2 3 2 0 8 0 0 1 0 1 0 1 0 3 2 4 Alpha carbonic anhydrase (AHRD V3.3 *** A0A200R5P3_9MAGN) AT1G08080 Solyc11g069650.2 405 341 372 941 448 377 535 485 327 631 463 445 283 389 338 Unknown protein Solyc11g069670.2 2 1 0 0 4 7 7 3 11 1 3 5 0 2 12 CC-NBS-LRR type resistance-like protein (AHRD V3.3 *-* E3W9R6_CAPCH),Pfam:PF18052 Solyc11g069680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Acyltransferase-like protein (AHRD V3.3 *** Q589X8_TOBAC) Solyc11g069690.3 136 262 208 149 207 229 252 246 210 142 177 177 304 303 286 Protein disulfide-isomerase 5-1 (AHRD V3.3 *** A0A1U8EZC9_CAPAN) AT1G07960 Solyc11g069700.2 940 410 1452 756 1 5 13 21 315 1293 472 139 707 292 246 Elongation factor 1-alpha (AHRD V3.3 *** A0A1U8EL12_CAPAN) AT1G07920 Solyc11g069710.2 322 516 525 516 704 681 711 766 398 408 379 525 386 420 390 ABC transporter-like (AHRD V3.3 *** A0A200Q907_9MAGN) AT2G28070 Solyc11g069720.2 4319 4081 3629 3532 3244 2936 3075 3387 5333 4100 3527 4318 5050 5261 4208 Cell division cycle protein 48-like protein (AHRD V3.3 *** A0A1U8EVJ0_CAPAN) AT5G03340 Solyc11g069730.1 105 200 196 198 76 89 73 53 150 113 286 173 207 118 79 BnaA04g16200D protein (AHRD V3.3 *-* A0A078H164_BRANA) Solyc11g069735.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 High-affinity nitrate transporter 2.2 (AHRD V3.3 *** NRT22_ORYSJ) AT1G08090 Solyc11g069750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 High-affinity nitrate transporter 2.2 (AHRD V3.3 *** NRT22_ORYSJ) Solyc11g069760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 High-affinity nitrate transporter 2.1 (AHRD V3.3 *-* A0A2G2YIB2_CAPAN) Solyc11g069765.1 201 230 211 236 192 217 219 223 230 196 258 218 183 186 204 SNF1-related protein kinase regulatory subunit beta-3 (AHRD V3.3 *** A0A2G2YI64_CAPAN) AT2G28060 Solyc11g069770.2 12 15 20 73 3 3 4 5 4 0 10 0 26 21 42 Agamous-like MADS-box protein AGL62 (AHRD V3.3 *** A0A2G2VLW0_CAPBA) Solyc11g069780.3 393 701 523 748 674 751 753 677 999 768 863 1264 1015 945 691 P-loop NTPase domain-containing protein LPA1-like protein 1 (AHRD V3.3 *** A0A2G3BBZ6_CAPCH) AT3G45090 Solyc11g069790.2 7761 8776 7529 6820 6828 6035 6268 7137 6895 5822 5733 7904 7723 7102 7091 60 kDa chaperonin (AHRD V3.3 *** B2IXD2_NOSP7) AT2G28000 Solyc11g069800.1 1056 1266 1334 1560 1611 1301 1294 1727 2641 2702 1749 1984 1779 1300 1372 Allene oxide synthase, chloroplastic (AHRD V3.3 *** A0A2G2YI94_CAPAN) AT5G42650 Solyc11g069810.3 246 312 427 392 584 535 634 596 437 385 417 392 355 318 368 Cysteine proteinases superfamily protein (AHRD V3.3 *** A0A2U1LH85_ARTAN) AT5G03330 Solyc11g069820.3 3 22 18 12 17 31 23 27 16 9 2 23 17 23 10 ABC transporter-like (AHRD V3.3 *** A0A200R5R6_9MAGN) AT5G60740 Solyc11g069830.2 205 206 236 162 169 128 161 136 192 156 225 157 256 207 223 Arsenical pump ATPase (AHRD V3.3 *** A0A200R5Q6_9MAGN) AT3G10350 Solyc11g069840.3 4 30 12 26 49 18 16 17 25 28 46 15 2 12 60 DUF547 domain-containing protein/Lzipper-MIP1 domain-containing protein (AHRD V3.3 *** A0A1Q3B3P9_CEPFO) AT5G60720 Solyc11g069850.3 400 212 259 241 217 255 185 220 192 290 207 336 185 273 289 Telomere repeat-binding protein 6 (AHRD V3.3 *-* A0A2I0VYX5_9ASPA) Solyc11g069860.3 491 814 824 799 686 686 693 677 694 511 707 807 1137 1137 1121 Glutaredoxin (AHRD V3.3 *-* A0A200QZ41_9MAGN) AT5G20500 Solyc11g069870.1 0 0 0 2 0 0 0 0 0 2 0 0 1 0 0 RlpA-like double-psi beta-barrel domain-containing protein (AHRD V3.3 *** A0A2U1KQ79_ARTAN) Solyc11g069880.1 17 61 35 20 12 11 14 19 32 32 0 16 133 54 27 Ripening-related protein grip22 (AHRD V3.3 *** A0A1U8EJN4_CAPAN) Solyc11g069890.3 764 670 789 614 543 491 478 480 546 612 590 599 735 678 917 BEL1-like homeodomain protein 8 (AHRD V3.3 *** A0A2G2YHP0_CAPAN) Solyc11g069900.3 4 0 1 5 0 0 0 0 0 0 0 0 1 2 9 Unknown protein Solyc11g069910.2 1428 1426 1839 1535 1986 1849 1736 1861 1677 1436 1801 1751 1555 1494 1361 DNA-directed RNA polymerase II subunit RPB11 (AHRD V3.3 *** A0A2G2YHT6_CAPAN) AT3G52090 Solyc11g069920.1 33 34 43 20 36 33 40 29 40 21 92 30 16 41 43 I2C6 Solyc11g069930.3 107 99 116 144 115 102 132 73 70 69 180 62 77 76 158 CC-NBS-LRR type resistance-like protein (AHRD V3.3 *-* E3W9R6_CAPCH),Pfam:PF18052 Solyc11g069940.1 468 145 115 290 100 72 74 50 142 151 206 110 191 123 220 Glutaredoxin (AHRD V3.3 *** A0A118JSL8_CYNCS) AT4G33040 Solyc11g069950.2 1020 1182 764 862 1068 1016 948 1281 1326 975 1040 1144 1281 1247 722 FtsH protease AT2G26140 Solyc11g069960.2 0 1 0 0 2 3 0 1 1 1 0 0 3 0 2 RLK-1 Solyc11g069970.1 0 10 0 4 14 2 1 4 2 14 0 1 0 10 17 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** A0A2U1MMJ0_ARTAN) AT5G11890 Solyc11g069990.2 489 386 408 666 664 650 819 573 470 655 579 413 367 528 543 I2C5 Solyc11g070010.3 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 Dynamin-related protein 4C (AHRD V3.3 *** A0A2G2ZPX2_CAPAN) Solyc11g070020.3 231 254 429 431 382 399 408 372 360 309 344 356 314 401 311 rhomboid family protein (AHRD V3.3 *** AT5G11810.1) AT5G11810 Solyc11g070030.2 3135 2612 2788 2690 3071 2830 2735 2760 2633 2739 2674 2595 2654 2379 2643 NADH-quinone oxidoreductase subunit B (AHRD V3.3 *** A0A1V9H215_9XANT) AT5G11770 Solyc11g070040.3 37 39 17 25 41 22 26 30 42 28 2 21 24 30 29 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2VQK3_CAPBA) AT1G77360 Solyc11g070050.2 790 645 785 661 811 878 930 753 625 550 719 689 667 623 685 hypothetical protein (AHRD V3.3 *** AT4G32930.1) AT4G32930 Solyc11g070060.2 87 36 130 71 86 49 58 68 79 44 69 88 40 77 79 hypothetical protein (AHRD V3.3 *** AT4G32930.1) AT4G32930 Solyc11g070070.3 103 121 200 64 78 66 71 67 79 45 63 88 156 142 107 Zinc finger transcription factor 70 AT3G19360 Solyc11g070080.1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 AslB, putative (DUF239) (AHRD V3.3 *** F4JYA0_ARATH) Solyc11g070090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AslB, putative (DUF239) (AHRD V3.3 *** F4JYA0_ARATH) Solyc11g070100.2 1097 1414 1752 1673 1782 2134 2171 1550 1330 1212 1634 1278 1382 1543 1647 protein EARLY FLOWERING 3 (AHRD V3.3 *** A0A2I4FS73_9ROSI) AT2G25930 Solyc11g070110.3 228 368 474 493 498 495 493 330 446 317 431 346 440 510 487 Clathrin interactor EPSIN 1 (AHRD V3.3 *** A0A1U8GQ10_CAPAN) AT5G11710 Solyc11g070120.2 127 141 171 162 142 134 138 159 188 156 167 149 119 130 205 Vacuolar protein sorting-associated protein 32 (AHRD V3.3 *** A0A2U1MKD2_ARTAN) AT4G29160 Solyc11g070130.2 926 722 671 802 571 578 588 609 591 551 731 580 962 807 976 Profilin (AHRD V3.3 *** A0A2G2VQJ3_CAPBA) AT2G19760 Solyc11g070140.2 97 263 390 302 283 375 378 246 192 186 250 253 267 310 392 Protein kinase p34cdc2 (AHRD V3.3 *** Q40789_PETCR) Solyc11g070150.2 1 1 0 4 3 9 9 4 2 0 0 3 0 2 0 Histidine-containing phosphotransfer protein 4 (AHRD V3.3 *** A0A2G2YI23_CAPAN) AT3G16360 Solyc11g070160.2 138 182 157 146 168 200 210 186 158 77 143 170 179 239 208 SAWADEE HOMEODOMAIN protein (AHRD V3.3 *** A0A178W211_ARATH) Solyc11g070170.2 677 995 679 671 727 776 877 906 787 579 533 716 991 961 551 Protein kinase family protein (AHRD V3.3 *** F4ISN4_ARATH) AT2G25760 Solyc11g070175.1 208 140 141 97 87 99 85 106 136 135 70 109 113 122 127 Pectinesterase (AHRD V3.3 *** A0A2G3BBX7_CAPCH) AT3G29090 Solyc11g070180.1 3 9 9 1 12 12 7 6 7 4 12 9 10 8 10 Unknown protein Solyc11g070183.1 1358 913 732 1490 669 851 1134 1027 552 1191 741 997 867 1017 728 autophagy-related protein 11 (AHRD V3.3 *-* XP_004233696.3) Solyc11g070187.1 15 23 30 12 3 12 12 17 13 2 17 8 10 13 17 Pectinesterase (AHRD V3.3 *-* A0A2G3BBX7_CAPCH) Solyc11g071190.3 20 19 79 81 40 50 16 25 19 60 46 18 8 8 10 SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-like protein (AHRD V3.3 *-* AT5G11620.2) AT5G11620 Solyc11g071200.3 2 63 46 71 77 100 83 106 41 33 24 62 35 81 46 Unknown protein Solyc11g071210.3 36 23 34 41 36 25 44 50 43 33 19 34 56 53 21 profilin (AHRD V3.3 --* XP_007202752.1) Solyc11g071220.2 177 152 202 175 147 154 184 207 222 199 249 150 170 192 290 hypothetical protein (AHRD V3.3 *-* AT5G11600.2) AT5G11600 Solyc11g071223.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Carotenoid 9,10(9',10')-cleavage dioxygenase (AHRD V3.3 *-* A0A2I0XJF4_9ASPA) Solyc11g071227.1 0 1 0 1 7 5 6 2 1 0 4 0 1 3 0 carotenoid 9,10(9',10')-cleavage dioxygenase 1-like (AHRD V3.3 *** A0A2I4GNF3_9ROSI) Solyc11g071230.2 183 148 162 193 271 304 278 280 164 153 160 163 144 141 130 Glycosyltransferases (AHRD V3.3 *** K4DAI0_SOLLC) Solyc11g071240.2 603 692 614 1041 2560 1753 2448 3061 773 1599 610 1922 474 694 163 U-box domain-containing protein 26 (AHRD V3.3 *** A0A1J3FUP2_NOCCA) AT5G11550 Solyc11g071250.3 699 652 483 539 637 619 680 606 756 682 515 574 661 674 564 protein EMBRYONIC FLOWER 1-like (AHRD V3.3 *-* A0A2I4ELW1_9ROSI) AT5G11530 Solyc11g071260.2 509 695 628 802 963 927 1029 985 617 599 517 755 722 613 426 Unknown protein Solyc11g071270.2 458 624 688 550 708 741 700 650 550 439 634 499 544 619 601 target of Myb protein 1-like (AHRD V3.3 *** A0A2I4DXB2_9ROSI) AT4G32760 Solyc11g071280.2 167 194 217 245 303 311 256 287 215 171 234 189 135 173 223 4-amino-4-deoxychorismate lyase AT5G57850 Solyc11g071290.2 14 216 167 92 550 549 560 479 102 48 65 100 16 71 1 Alcohol dehydrogenase-like protein (AHRD V3.3 *** A0A291L9M0_MENPI) Solyc11g071295.1 0 1 0 3 0 4 1 0 2 0 0 0 0 0 0 Unknown protein Solyc11g071300.2 43 262 393 698 726 821 891 816 346 228 402 395 52 232 249 Myb (AHRD V3.3 *** Q948S6_TOBAC) AT4G32730 Solyc11g071310.1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 Sulfite exporter TauE/SafE family protein (AHRD V3.3 *** A0A2U1KY14_ARTAN) AT2G25737 Solyc11g071320.2 1281 1737 2187 1975 2192 2434 2517 1957 1588 1340 2196 1662 1827 1969 2217 50S ribosomal protein L27 (AHRD V3.3 *** A0A2G3BPR5_CAPCH) AT5G15220 Solyc11g071330.3 486 853 941 1064 1019 1331 1299 775 559 463 1074 662 880 1113 1023 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *** Q9LV46_ARATH) AT3G24570 Solyc11g071340.3 1330 1467 1284 1301 1121 1197 1252 1216 1092 908 901 1213 1313 1486 1022 FRIGIDA-like protein (AHRD V3.3 *** A0A2G2VQV0_CAPBA) Solyc11g071350.1 6 0 6 1 0 0 0 0 4 0 4 0 0 5 25 Aluminum-activated malate transporter (AHRD V3.3 *** A0A200Q9N0_9MAGN) Solyc11g071360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g071370.1 22 53 42 44 48 48 35 37 44 25 46 37 61 47 61 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QJM0_9MAGN) AT1G05750 Solyc11g071380.1 0 2 15 12 7 18 6 13 5 14 3 12 4 9 0 CLAVATA3 protein (AHRD V3.3 --* I2FFU6_LOTJA) Solyc11g071390.1 2 17 110 24 16 15 12 8 15 29 33 4 10 15 47 I2C7 Solyc11g071400.1 0 0 0 3 2 2 1 0 1 2 3 1 3 0 0 I2C3 Solyc11g071420.3 108 58 81 109 68 63 81 42 61 96 92 58 128 103 106 I2C2 AT3G14470 Solyc11g071430.1 1666 1194 1168 1836 946 1159 1112 922 857 1545 1251 906 1611 1205 1596 Immunity to Fusarium wilt race 2 AT3G14470 Solyc11g071440.2 2 0 7 0 0 0 0 1 0 0 1 0 0 0 0 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A1I9LQ33_ARATH) Solyc11g071450.3 5 1 6 4 0 1 4 0 5 0 0 14 1 2 8 Unknown protein Solyc11g071460.2 116 91 396 353 77 100 105 79 454 128 276 262 222 326 166 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PI79_ARTAN) Solyc11g071470.1 833 4838 2339 2027 6250 5813 4958 6153 4620 3444 1290 3002 12886 7413 3987 Transferase (AHRD V3.3 *** A0A200R9Q7_9MAGN) Solyc11g071480.1 501 1491 645 517 1044 923 797 965 1055 1537 712 1531 1817 1492 519 Transferase (AHRD V3.3 *** A0A200R9R6_9MAGN) Solyc11g071490.2 1859 3158 4133 3037 3571 3992 4065 3095 1856 2059 3801 2660 3431 2837 3731 60S ribosomal protein l30-like (AHRD V3.3 *** A0A2K3KYY6_TRIPR) AT1G36240 Solyc11g071500.3 419 248 313 348 222 321 339 201 227 191 281 195 222 301 407 Transcription factor DIVARICATA (AHRD V3.3 *-* A0A2G2VPF7_CAPBA) Solyc11g071510.3 461 451 492 426 735 726 746 566 363 455 549 432 418 514 508 Glycosyl hydrolase (AHRD V3.3 *-* D9ZCE7_9CARY) AT5G21070 Solyc11g071520.2 18 18 19 58 51 41 28 9 36 37 74 18 11 18 65 Glucan endo-1,3-beta-glucosidase 11 (AHRD V3.3 *** A0A2G3BAL0_CAPCH) AT3G15800 Solyc11g071530.1 135 123 98 94 147 128 131 117 122 72 112 79 145 134 194 50S ribosomal protein L7/L12 (AHRD V3.3 *** A0A2G2VPH9_CAPBA) AT1G70190 Solyc11g071540.2 248 427 369 360 526 451 487 468 504 341 326 334 382 480 499 TATA box-binding protein-associated factor RNA polymerase I subunit B (AHRD V3.3 *** A0A2I4EE95_9ROSI) AT2G02955 Solyc11g071550.2 88 200 139 194 338 346 381 316 327 330 213 281 251 191 197 Amidase family protein (AHRD V3.3 *** A0A2U1LR37_ARTAN) AT4G34880 Solyc11g071560.2 100 177 586 425 408 393 299 198 251 256 718 167 160 199 460 Protein RESTRICTED TEV MOVEMENT 2 (AHRD V3.3 *-* A0A1J3D687_NOCCA) AT5G20970 Solyc11g071570.3 542 736 559 629 852 814 904 803 567 489 516 504 624 747 470 Gamma-tubulin complex component 6 (AHRD V3.3 *** A0A1J3E6I0_NOCCA) AT3G43610 Solyc11g071580.2 3 0 0 3 0 0 0 0 0 3 0 0 5 0 7 aldehyde oxidase 5pseudogene AT2G27150 Solyc11g071600.2 74 24 22 17 3 8 10 15 10 15 35 13 17 21 36 aldehyde oxidase 3 AT2G27150 Solyc11g071610.2 27 140 110 78 124 147 157 165 184 95 107 117 78 143 134 Aldehyde oxidase 3 (AHRD V3.3 *** B0LB01_PEA) AT2G27150 Solyc11g071620.3 146 1564 846 722 2213 2185 2413 2163 1313 717 1109 1084 726 953 1512 aldehyde oxidase 1 AT2G27150 Solyc11g071630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator ARR22 (AHRD V3.3 *** A0A2G3BAG9_CAPCH) AT3G04280 Solyc11g071640.3 882 4678 3956 4616 12314 11875 12020 14756 4847 3070 4601 8142 938 2849 1936 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A1P8BG25_ARATH) AT5G20950 Solyc11g071650.3 0 1 0 1 1 2 0 0 1 1 1 0 1 0 0 Glycosyl hydrolase family protein (AHRD V3.3 *** A0A2U1QCD6_ARTAN) Solyc11g071660.1 1919 1484 1957 1310 1371 1423 1343 1258 1626 1189 2330 1265 1827 1596 2335 NF-kappa-B-activating protein (AHRD V3.3 *-* A0A2G3BAH0_CAPCH) AT4G02720 Solyc11g071670.2 67 102 36 58 60 83 88 77 80 58 31 81 80 84 44 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QRQ7_9MAGN) AT1G02420 Solyc11g071680.2 499 604 445 505 651 619 587 666 628 436 497 521 592 569 526 Serine/threonine-protein kinase TOUSLED (AHRD V3.3 *** A0A2G2YH78_CAPAN) AT5G20930 Solyc11g071690.3 2366 1395 1792 1186 792 1117 888 646 987 995 1859 1014 1340 1549 2452 Zinc knuckle (CCHC-type) family protein (AHRD V3.3 *** Q9FYD1_ARATH) AT3G43590 Solyc11g071700.2 2005 2024 1578 1531 1598 1680 1758 1820 1897 1548 1309 1549 2151 2042 1788 ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** A0A2I4H4Q0_9ROSI) Solyc11g071710.2 536 699 323 890 956 644 682 721 463 598 419 519 503 456 357 Thylakoid lumenal P17.1 protein (AHRD V3.3 *** Q9LXV9_ARATH) AT3G44020 Solyc11g071720.2 26 28 23 31 39 65 42 51 19 19 15 30 16 9 14 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A1P8BCJ0_ARATH) AT5G06570 Solyc11g071730.3 165 872 788 751 1693 1810 1725 1998 941 539 864 1173 153 549 427 Phragmoplast orienting kinesin-1 (AHRD V3.3 *** A0A2G3BAM6_CAPCH) AT3G44050 Solyc11g071740.2 123 107 163 19 1 1 1 1 11 26 472 42 4 52 106 Calcium-binding protein CML38 (AHRD V3.3 *** A0A2G3BAR0_CAPCH) AT5G42380 Solyc11g071750.2 0 0 8 0 0 0 0 0 0 0 0 0 0 1 0 Calcium-binding protein CML38 (AHRD V3.3 *** A0A2G3BAP9_CAPCH) AT5G42380 Solyc11g071760.3 11 8 9 0 0 0 0 0 1 1 10 13 0 5 7 regulator of gene silencing AY642285 AT5G42380 Solyc11g071770.1 744 528 551 316 305 437 375 389 387 389 452 363 625 507 515 Elongation factor 2 (AHRD V3.3 *** A0A2I0X2S3_9ASPA) AT3G22980 Solyc11g071780.1 7 4 5 7 1 2 7 3 10 4 12 7 6 9 12 Unknown protein Solyc11g071790.2 233 390 421 521 462 468 589 393 380 374 395 354 825 681 415 Succinate dehydrogenase subunit 6, mitochondrial (AHRD V3.3 *** A0A2G2XX03_CAPAN) AT1G08480 Solyc11g071800.2 323 687 604 581 760 839 753 920 813 553 476 692 591 547 542 Strictosidine synthase (AHRD V3.3 *** A0A200Q9R0_9MAGN) AT1G08470 Solyc11g071810.2 606 524 588 769 652 493 403 526 295 425 384 716 429 600 346 fasciated AT1G08465 Solyc11g071820.3 255 259 325 415 516 501 548 378 378 319 326 358 253 245 531 Protein kinase domain (AHRD V3.3 *** A0A200Q9J9_9MAGN) AT5G22050 Solyc11g071830.2 329 174 247 136 212 271 246 172 186 115 122 169 188 148 222 DnaJ protein like (AHRD V3.3 *** A0A2I0X6P9_9ASPA) Solyc11g071840.2 780 1025 1225 992 1017 1147 1231 1086 1167 845 1087 990 1003 934 980 SUN-like protein 31 AT3G22190 Solyc11g071850.1 1126 1513 1151 1714 2633 2058 1959 2626 1521 2042 1201 1979 1419 1371 598 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MQ33_TRIPR) AT3G52060 Solyc11g071860.2 983 721 462 699 496 571 570 510 632 742 392 570 585 579 598 RING-H2 finger protein ATL48 (AHRD V3.3 *-* A0A2G3BAN8_CAPCH) Solyc11g071870.2 117 155 193 234 163 179 155 146 206 279 387 249 127 165 288 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200R0U5_9MAGN) Solyc11g071880.3 0 0 2 0 0 0 0 0 0 0 0 0 2 1 4 receptor-like kinase2 Solyc11g071890.3 149 184 157 205 183 246 276 222 154 109 207 141 139 190 133 outer envelope protein 80, chloroplastic (AHRD V3.3 *** A0A2I4H6U9_9ROSI) AT3G44160 Solyc11g071900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Plant self-incompatibility protein S1 family, putative (AHRD V3.3 *** A0A061DZB7_THECC) Solyc11g071910.2 1985 2037 1241 1367 1381 1321 1288 1443 1351 1348 1202 1373 2169 1778 1684 GTPase LSG1-2 (AHRD V3.3 *** A0A2G3BAP2_CAPCH) AT1G08410 Solyc11g071920.3 2530 1733 1600 1740 1260 1608 1649 1314 1556 1565 1588 1497 1538 1740 2081 Serine/threonine-protein phosphatase (AHRD V3.3 *** A0A2G2VPQ2_CAPBA) AT2G27210 Solyc11g071930.2 281 347 340 264 334 359 282 338 447 218 327 369 520 407 373 DnaJ domain-containing protein (AHRD V3.3 *** A0A2U1MZ42_ARTAN) AT5G22080 Solyc11g071940.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 7 FAF-like protein (DUF3049) (AHRD V3.3 *-* AT5G22090.2) Solyc11g071950.3 664 675 609 481 660 631 554 580 676 473 576 523 845 720 748 ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** AT5G22040.3) AT5G22040 Solyc11g071960.2 97 200 253 209 185 168 207 165 141 132 193 174 216 221 215 Sulfhydryl oxidase (AHRD V3.3 *** A0A2G2YGZ1_CAPAN) AT1G49880 Solyc11g071970.2 252 439 658 883 1127 1514 1365 1311 535 467 944 596 430 589 864 Serine/threonine-protein kinase Nek5 (AHRD V3.3 *** A0A2G2YGZ2_CAPAN) AT3G44200 Solyc11g071990.2 2 0 4 1 0 0 3 1 4 2 12 0 2 0 3 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A2U1M1X0_ARTAN) AT3G44190 Solyc11g072000.2 9 4 11 14 4 5 2 3 6 4 0 2 3 9 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9R5_CAPCH),Pfam:PF18052 Solyc11g072010.3 225 174 185 258 225 221 213 259 248 217 166 294 196 226 178 Homoserine dehydrogenase (AHRD V3.3 *** A0A1U8EXE8_CAPAN) AT5G21060 Solyc11g072020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polyubiquitin (AHRD V3.3 *** A0A2G2VFG0_CAPBA) Solyc11g072030.3 50 271 304 228 177 213 189 171 289 130 228 236 228 221 119 Lipid-transfer protein (AHRD V3.3 *** B6TD92_MAIZE) AT3G43720 Solyc11g072040.2 219 164 224 174 198 188 207 207 217 266 259 249 213 151 187 GDSL esterase/lipase (AHRD V3.3 *** A0A2K3NP63_TRIPR) Solyc11g072050.1 468 581 499 520 639 669 682 603 644 593 576 611 533 521 357 F-box/WD-40 repeat-containing protein (AHRD V3.3 *** A0A2G2YGR9_CAPAN) AT5G21040 Solyc11g072060.3 28 130 210 290 274 375 403 224 158 125 231 215 126 185 206 Myb-related protein (AHRD V3.3 *** A0A2G3C6T9_CAPCH) AT3G11440 Solyc11g072070.3 1055 825 724 749 691 689 618 704 776 821 643 708 949 746 581 BTB-POZ and MATH domain protein (AHRD V3.3 *** B9VXZ7_CAPAN) AT3G03740 Solyc11g072080.1 76 214 123 310 554 484 526 552 226 292 192 304 101 163 65 F-box/kelch-repeat protein (AHRD V3.3 *-* A0A2G3BAF6_CAPCH) AT5G26960 Solyc11g072090.2 853 954 843 803 964 859 943 821 774 733 618 749 820 957 716 translation initiation factor eIF-2B subunit gamma (AHRD V3.3 *** A0A2I4FN69_9ROSI) AT5G19485 Solyc11g072100.2 136 165 235 269 186 205 180 164 340 310 355 286 260 193 228 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LUR0_ARTAN) Solyc11g072110.2 246 1520 540 1179 1115 884 887 1034 1910 883 903 866 1042 920 1641 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1Q1F3_ARTAN) Solyc11g072120.2 610 1390 642 1260 1476 1173 1168 1340 2099 1060 1171 1395 1490 1154 1836 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1N5S2_ARTAN) Solyc11g072130.2 20 76 30 43 104 75 90 92 76 43 70 84 86 86 67 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1Q1F3_ARTAN) Solyc11g072140.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *** A0A200PR58_9MAGN) AT1G21270 Solyc11g072150.3 1292 676 631 675 596 569 572 608 493 765 690 682 707 733 716 Dr1-associated corepressor (AHRD V3.3 *** A0A2G3BAH8_CAPCH) Solyc11g072160.3 1401 1300 804 1002 1098 977 839 1291 1289 1351 857 1312 1121 1314 856 Ubiquitin-associated/translation elongation factor EF1B protein (AHRD V3.3 *** A0A2U1Q4S3_ARTAN) AT2G26920 Solyc11g072170.2 329 329 311 448 320 341 373 277 268 341 372 357 256 315 336 Tryptophan/tyrosine permease (AHRD V3.3 *** A0A200QTQ5_9MAGN) AT5G19500 Solyc11g072180.3 99 142 151 164 263 207 221 201 152 139 167 198 167 160 141 THO complex subunit 7A (AHRD V3.3 *-* A0A1U8EMF0_CAPAN) Solyc11g072190.2 9794 12701 12252 11901 12267 13292 13370 11082 7385 7459 9670 9114 13036 11706 13165 Elongation factor 1-beta (AHRD V3.3 *** A0A1U8EW17_CAPAN) AT5G19510 Solyc11g072200.2 0 0 4 0 0 1 1 0 0 0 1 1 0 0 7 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** F4IV21_ARATH) Solyc11g072210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 *-* A0A200QBU2_9MAGN) AT5G56200 Solyc11g072220.2 232 180 169 166 180 145 161 88 155 152 208 96 143 208 181 Ubiquitin-like-specific protease 1D (AHRD V3.3 *-* A0A1J3EWQ3_NOCCA) Solyc11g072230.1 16 12 24 35 46 44 26 29 25 20 22 61 19 21 20 glucan endo-1,3-beta-glucosidase 7 (AHRD V3.3 *** A0A2I4EQS0_9ROSI) AT3G55780 Solyc11g072240.2 1950 4634 4701 4307 5299 5041 5019 4763 3776 2456 4651 3297 5990 4943 5117 Calmodulin 4 Solyc11g072250.2 11 22 51 30 92 62 53 45 18 18 19 60 32 28 5 hypothetical protein (AHRD V3.3 *-* AT1G21560.6) Solyc11g072260.2 1235 2536 3656 2608 2829 3279 3225 2366 1530 1565 2401 1991 3151 2958 2517 40S ribosomal protein S13 (AHRD V3.3 *** A0A2I0WN36_9ASPA) AT4G00100 Solyc11g072270.3 318 985 1117 1146 1515 1512 1560 1300 918 759 1066 949 1247 1203 1063 Calmodulin (AHRD V3.3 *** B6T4U8_MAIZE) AT1G12310 Solyc11g072280.3 461 877 922 1058 1323 1413 1377 1368 743 609 1032 1062 473 788 544 65-kDa microtubule-associated protein 3 (AHRD V3.3 *** A0A2G2YGP9_CAPAN),Pfam:PF03999 AT5G51600 Solyc11g072290.3 610 848 1177 900 1225 1198 1305 1164 999 783 1068 919 1070 1036 1208 Cysteine and histidine-rich domain-containing protein RAR1 (AHRD V3.3 *** A0A2G2YGM0_CAPAN) AT5G51700 Solyc11g072300.2 107 200 260 189 263 248 206 226 299 181 274 195 300 190 227 ACI13 AT5G51840 Solyc11g072310.2 12 534 102 276 29 39 29 37 728 107 141 109 249 194 250 gibberellin 20-oxidase-3 AT4G25420 Solyc11g072320.3 1269 960 592 490 547 554 499 534 647 521 420 620 820 773 709 Something about silencing protein 10 (AHRD V3.3 *** A0A2G2WKC0_CAPBA) AT2G43650 Solyc11g072330.2 403 252 171 178 155 179 218 168 180 196 144 190 196 217 296 Two-component response regulator (AHRD V3.3 *-* A0A2U1MTQ0_ARTAN) Solyc11g072340.2 2882 3009 3230 2937 2627 3128 3261 2599 3402 2573 3469 3434 3260 3756 3747 Serine/arginine-rich-splicing factor RS40 (AHRD V3.3 *** A0A0N0RI43_NICAT) AT5G52040 Solyc11g072350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance-like protein (AHRD V3.3 *-* E3W9R6_CAPCH) Solyc11g072360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance-like protein (AHRD V3.3 *-* E3W9R6_CAPCH) Solyc11g072370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CC-NBS-LRR type resistance protein (AHRD V3.3 *-* E3W9R9_CAPCH) Solyc11g072380.2 119 84 132 125 69 47 67 56 77 57 139 60 62 142 139 Cupin_1 domain-containing protein (AHRD V3.3 *** A0A1Q3B294_CEPFO) AT2G28490 Solyc11g072390.2 483 734 387 386 447 345 397 504 531 320 256 383 865 726 389 Something about silencing protein 10 (AHRD V3.3 *** A0A2G2WKC0_CAPBA) AT2G43650 Solyc11g072400.3 64 44 62 72 87 93 74 74 59 50 77 61 41 55 76 Exonuclease V, chloroplastic (AHRD V3.3 *** A0A2G3BA87_CAPCH) AT5G60370 Solyc11g072410.2 145 287 281 214 296 272 294 281 309 155 223 292 442 349 225 Adenylate kinase isoenzyme 6 homolog (AHRD V3.3 *** A0A2G2VP92_CAPBA),Pfam:PF13238 AT5G60340 Solyc11g072430.3 971 1210 1268 1292 1043 1257 1252 990 1262 934 1374 1091 1175 1530 1623 RNAligase (AHRD V3.3 *** AT1G07910.2) AT1G07910 Solyc11g072440.2 278 298 264 415 248 376 321 287 360 282 469 281 317 362 396 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q9SF34_ARATH) Solyc11g072450.2 797 2392 2937 2598 2979 3301 3332 2689 2341 1606 2192 1827 3060 2858 2268 ATP synthase subunit d, mitochondrial (AHRD V3.3 *** A0A1U8ELT5_CAPAN) AT3G52300 Solyc11g072460.2 270 364 439 371 470 472 471 447 465 351 405 451 422 493 538 NEDD8-activating enzyme E1 regulatory subunit (AHRD V3.3 *** A0A2G2VP94_CAPBA) AT1G05180 Solyc11g072470.3 7 6 0 11 0 0 0 0 28 8 21 0 2 12 20 LOB domain-containing protein (AHRD V3.3 *** A0A2K3PP50_TRIPR) AT2G28500 Solyc11g072475.1 0 1 0 8 5 3 12 5 5 3 1 0 0 6 6 Unknown protein Solyc11g072480.2 141 150 151 112 172 154 119 175 234 195 247 237 107 164 164 Tetraspanin-3 (AHRD V3.3 *** A0A2G3BA66_CAPCH) AT3G45600 Solyc11g072490.2 1760 2327 2668 2207 2797 2864 2510 3222 3861 2231 2515 3307 1966 2407 2073 Interactor of constitutive active ROPs-like protein (AHRD V3.3 *** A0A2K3N4K9_TRIPR) AT5G60210 Solyc11g072500.2 950 756 452 888 468 360 328 364 654 651 378 322 1124 919 1021 Dof zinc finger protein (AHRD V3.3 *** A0A2K3LIE4_TRIPR) AT2G28510 Solyc11g072510.3 366 317 388 383 498 400 451 496 429 400 458 492 443 391 479 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1MHS5_ARTAN) AT5G58490 Solyc11g072520.3 583 711 692 735 734 671 761 724 788 560 570 641 738 753 584 Arogenate dehydratase (AHRD V3.3 *** A0A2G3BAA6_CAPCH) AT3G07630 Solyc11g072530.2 378 558 594 679 596 626 728 491 538 363 602 410 582 568 504 V-type proton ATPase subunit a (AHRD V3.3 *** A0A2G2VP84_CAPBA) AT2G28520 Solyc11g072540.3 855 579 599 863 628 633 649 734 749 867 647 817 434 655 849 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1QKR6_ARTAN) AT3G45620 Solyc11g072550.2 461 558 781 417 414 330 358 367 523 707 466 460 725 485 502 4,5-DOPA dioxygenase extradiol (AHRD V3.3 *** A0A2G2YGD8_CAPAN) AT4G15093 Solyc11g072560.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein NRT1/ PTR FAMILY 2.7-like (AHRD V3.3 *** A0A2I4HW78_9ROSI) Solyc11g072570.2 0 8 15 22 4 2 4 9 5 4 2 0 1 3 2 protein NRT1/ PTR FAMILY 2.7-like (AHRD V3.3 *** A0A2I4HW78_9ROSI) Solyc11g072580.2 19 131 75 70 148 111 70 124 80 62 50 56 57 70 56 Protein NRT1/ PTR FAMILY 2.7 (AHRD V3.3 *** A0A1U8EMW8_CAPAN) AT3G45680 Solyc11g072590.3 3765 2608 2671 2830 2247 2648 2830 2070 2608 2429 3132 2236 1904 2892 4283 RNA binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** Q9M1E4_ARATH) AT3G45630 Solyc11g072600.3 4533 6512 6356 7644 9841 10176 10014 8399 6890 6980 13154 7379 5799 6080 12035 APETALA2d AT2G28550 Solyc11g072605.1 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3EXQ7_NOCCA) Solyc11g072610.3 268 195 260 241 212 241 284 195 211 185 191 188 149 222 235 DNA repair (Rad51) family protein (AHRD V3.3 *** F4IIR6_ARATH) AT2G28560 Solyc11g072620.1 648 161 293 149 55 23 20 33 103 199 238 89 253 249 193 Unknown protein Solyc11g072623.1 284 128 162 53 13 17 12 28 52 108 168 29 197 52 83 Unknown protein Solyc11g072627.1 0 35 6 17 38 43 49 42 18 7 13 28 1 14 19 Early nodulin-like protein 3 (AHRD V3.3 *-* A0A2G3AND2_CAPAN) Solyc11g072630.2 81 237 140 170 398 373 371 400 180 172 184 191 135 145 152 mitogen-activated protein kinase 4 AT1G07880 Solyc11g072640.3 1352 1214 1090 1160 1190 1078 1160 1172 1182 1351 1113 1372 1425 1391 1064 Zinc-binding dehydrogenase (AHRD V3.3 *** A0A162PTR1_9PEZI) AT3G45770 Solyc11g072650.3 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 Zinc-binding dehydrogenase (AHRD V3.3 *** A0A162PTR1_9PEZI) Solyc11g072660.2 784 456 486 486 265 329 251 251 307 491 623 277 479 414 547 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1Q8E8_ARTAN) AT1G07870 Solyc11g072670.1 72 27 25 30 28 30 14 24 21 9 34 18 44 47 74 Unknown protein Solyc11g072680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 Fasciclin-like arabinogalactan family protein (AHRD V3.3 *-* Q9SV74_ARATH) Solyc11g072690.2 208 466 436 340 511 547 529 576 573 334 391 467 556 485 334 LES294902 3-desoxy-D-manno octulosonic acid-8-phosphate synthase AT1G16340 Solyc11g072700.2 0 2 0 0 0 0 1 0 2 0 0 0 0 0 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3BUE7_CEPFO) AT1G07850 Solyc11g072710.3 1845 1484 768 1083 947 709 648 878 1890 1068 868 681 859 846 817 phototropin 1 Solyc11g072720.2 499 397 446 687 451 519 475 563 431 490 535 515 440 376 485 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2VNB3_CAPBA) AT5G60050 Solyc11g072730.2 546 550 523 436 324 350 406 450 482 280 328 372 523 572 420 DNA-directed RNA polymerase subunit (AHRD V3.3 *** A0A1U8F5N3_CAPAN) AT5G60040 Solyc11g072740.1 159 225 242 135 107 203 176 172 197 73 253 125 267 211 206 protein PXR1 (AHRD V3.3 *** XP_004251285.1) Solyc11g072750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chitinase 2 (AHRD V3.3 *** A0A1U8EZQ3_CAPAN) Solyc11g072760.1 0 2 0 0 0 3 2 3 2 0 1 0 0 0 0 Chitinase 2 (AHRD V3.3 *** A0A2G3BA55_CAPCH) Solyc11g072765.1 7 7 27 42 28 28 23 18 4 20 33 4 6 28 44 Embryo-specific protein ATS3 (AHRD V3.3 *** ATS3_ARATH) Solyc11g072770.2 62 69 75 43 123 80 77 92 49 21 49 65 32 39 16 WUSCHEL-related homeobox protein (AHRD V3.3 *-* A0A097I3L1_ROSCN) Solyc11g072780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ycf68 (plastid) (AHRD V3.3 *-* YP_007026770.1) Solyc11g072790.2 211 162 210 337 83 141 112 104 179 181 318 232 179 286 214 WOX3b (AHRD V3.3 *** A0A1S3ZKN4_TOBAC) AT2G28610 Solyc11g072800.3 5 50 113 57 147 112 133 111 64 64 77 138 45 102 161 Respiratory burst oxidase (AHRD V3.3 *** A0A2U1P7U6_ARTAN) AT5G60010 Solyc11g072810.2 1769 1292 1072 1020 856 1025 971 996 1376 1159 1023 1118 1026 1313 1202 Nuclear factor related to kappa-B-binding protein (AHRD V3.3 *** A0A2K3PNF1_TRIPR) AT3G45830 Solyc11g072820.3 424 919 1147 1262 1311 1431 1548 1308 1252 895 1220 983 1040 1046 1511 Kinesin (AHRD V3.3 *** A0A200R660_9MAGN) AT3G45850 Solyc11g072825.1 0 1 0 3 1 1 6 0 4 1 3 9 0 0 2 Unknown protein Solyc11g072830.1 11 14 3 22 13 26 13 17 17 24 11 28 14 19 48 Chitinase (AHRD V3.3 *** A0A2K3PML7_TRIPR) Solyc11g072840.1 90 799 862 903 1284 1406 1145 1338 657 535 709 1190 279 746 309 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc11g072850.2 62 23 23 67 77 31 20 25 27 18 70 36 33 41 38 CCT motif protein (AHRD V3.3 *** A0A2K3PKW2_TRIPR) AT5G59990 Solyc11g072860.2 147 2105 2118 1769 3083 3488 2862 3377 1203 1243 1754 2777 562 1770 637 Histone H4 (AHRD V3.3 *-* F2E7L1_HORVV) Solyc11g072870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A2U1QHF5_ARTAN) Solyc11g072880.2 1975 2606 2049 2096 2333 2561 2476 2609 2487 2162 1892 2040 2101 2182 1716 Calcium-transporting ATPase (AHRD V3.3 *** U9T0G4_RHIID) AT1G07670 Solyc11g072890.1 20 33 26 6 18 20 6 13 18 14 12 14 23 12 21 hypothetical protein (AHRD V3.3 *** AT5G02640.1) AT5G02640 Solyc11g072900.1 6 0 8 1 8 0 2 0 0 1 2 2 2 5 1 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2YGG9_CAPAN) Solyc11g072910.1 292 141 137 133 15 29 23 20 67 117 110 83 95 141 166 Receptor-like protein kinase THESEUS 1 (AHRD V3.3 *** A0A2G2VN90_CAPBA) AT3G46290 Solyc11g072920.2 0 0 1 1 0 0 0 0 15 3 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4DAZ8_SOLLC) AT5G06720 Solyc11g072930.3 78 28 61 19 0 1 7 6 14 51 71 2 125 10 1 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** A0A178WLG7_ARATH) Solyc11g072935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Allene oxide synthase, chloroplastic (AHRD V3.3 *-* A0A2G3CQ16_CAPCH) Solyc11g072940.2 3411 2442 2025 2081 2244 2182 2208 2376 2095 2617 1798 2240 2070 2025 1869 NOT2/NOT3/NOT5-like protein (AHRD V3.3 *** A0A2U1KP40_ARTAN) AT1G07705 Solyc11g072950.3 983 964 757 808 795 753 769 983 1156 1022 701 838 1201 1148 790 E3 UFM1-protein ligase 1-like protein (AHRD V3.3 *** A0A2G3B9Y7_CAPCH) AT3G46220 Solyc11g072960.1 0 1 0 4 4 7 2 0 1 0 9 7 3 0 15 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A1U8ERX5_CAPAN) Solyc11g072970.2 544 316 469 405 325 393 385 366 390 407 415 338 229 390 629 Nudix hydrolase 9 (AHRD V3.3 *** A0A2G2WKD2_CAPBA) AT3G46200 Solyc11g072980.1 0 30 1 4 12 17 17 6 7 4 0 2 5 5 0 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G2XYA4_CAPAN) AT1G07720 Solyc11g072990.1 405 223 306 251 120 124 84 66 262 287 354 221 252 246 318 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A2G3BA46_CAPCH) AT1G07720 Solyc11g073000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g073010.1 28 14 57 20 43 39 28 26 28 20 71 28 24 18 91 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A2G2VNA4_CAPBA) Solyc11g073020.3 192 197 120 232 70 75 78 82 144 103 169 148 198 250 368 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *** B6T8A4_MAIZE) AT2G28660 Solyc11g073030.1 19 26 19 3 3 6 3 2 14 9 6 19 22 14 55 Dirigent protein (AHRD V3.3 *** K4DB09_SOLLC) Solyc11g073040.1 37 42 30 28 9 16 4 18 36 41 18 33 78 38 54 Dirigent protein (AHRD V3.3 *-* M1B9I8_SOLTU) Solyc11g073050.2 670 1187 1482 1348 1891 1851 1715 1704 1553 1089 1347 1625 1324 1208 1093 ethylene-responsive small GTP-binding protein AT3G46060 Solyc11g073055.1 82 25 83 14 4 0 0 1 2 2 130 8 5 15 28 Zinc finger protein ZAT11 (AHRD V3.3 *-* A0A1J3JX49_NOCCA) Solyc11g073060.3 69 23 2 9 0 0 0 0 6 3 55 1 19 25 16 Zinc finger, C2H2 (AHRD V3.3 *** A0A2U1KDM0_ARTAN) Solyc11g073070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g073075.1 237 143 499 29 4 3 3 16 26 61 1081 293 149 49 268 Zinc finger protein (AHRD V3.3 *** A0A200PZ96_9MAGN) Solyc11g073080.3 849 587 1003 488 247 361 308 262 240 504 523 375 564 520 378 Methyl-CpG-binding domain-containing protein 6 (AHRD V3.3 *** A0A2G2VN72_CAPBA) Solyc11g073090.1 6 32 33 51 72 42 34 42 42 35 62 31 70 75 32 Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A200R6I7_9MAGN) Solyc11g073100.2 0 1 1 3 3 1 2 5 0 0 0 4 0 6 0 protein ALP1-like (AHRD V3.3 --* XP_024968707.1) Solyc11g073110.2 41 30 173 126 14 48 28 51 93 36 227 112 34 76 268 Protein UPSTREAM OF FLC (AHRD V3.3 *** A0A2G2VN71_CAPBA) Solyc11g073120.2 402 240 46 548 29 9 8 3 48 57 9 9 223 116 279 R2R3MYB transcription factor 58 AT3G46130 Solyc11g073130.2 187 257 476 469 220 252 320 234 322 371 467 607 271 456 643 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (AHRD V3.3 *** A0A2G2YGA2_CAPAN) AT5G59770 Solyc11g073140.2 2 6 0 3 0 1 0 0 0 0 2 0 0 1 1 late embryogenesis abundant protein-related / LEA protein-like protein (AHRD V3.3 *-* AT3G19430.2) Solyc11g073150.1 4 1 5 10 2 2 2 4 2 3 17 14 7 1 0 Late embryogenesis abundant protein-related / LEA protein-like protein (AHRD V3.3 *** A0A178VGJ3_ARATH) AT3G19430 Solyc11g073160.3 117 91 42 93 116 116 91 103 106 108 186 83 66 52 150 Riboflavin biosynthesis protein ribBA (AHRD V3.3 *** A0A2K3NL55_TRIPR) AT5G59750 Solyc11g073170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LC40_ARTAN) Solyc11g073180.2 0 2 0 13 0 1 0 0 0 2 0 4 0 6 0 UPA23 (AHRD V3.3 *** C8YZB5_CAPAN) Solyc11g073190.2 333 364 471 509 534 602 655 521 299 334 419 481 362 468 452 UDP-galactose/UDP-glucose transporter 5B (AHRD V3.3 *** A0A2G3BA03_CAPCH) Solyc11g073200.2 249 273 253 333 284 239 210 267 228 292 245 258 510 432 283 11-S seed storage protein (AHRD V3.3 *** A0A200Q154_9MAGN) AT1G07750 Solyc11g073210.2 22 7 0 0 0 1 0 0 0 0 0 0 4 3 0 11-S seed storage protein (AHRD V3.3 *** A0A200R651_9MAGN) AT1G07750 Solyc11g073220.3 89 65 49 56 35 60 60 46 56 86 57 46 75 59 54 DNA repair protein RAD51-like protein 4 (AHRD V3.3 *** A0A2G2V833_CAPBA) AT1G07745 Solyc11g073230.1 83 186 211 204 175 231 153 203 197 104 150 168 155 183 109 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2ZC78_CAPAN) AT1G07740 Solyc11g073231.1 1 0 5 4 0 3 4 0 2 1 3 0 2 0 1 Unknown protein Solyc11g073232.1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Unknown protein Solyc11g073234.1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g073236.1 1 4 0 0 0 4 0 0 1 0 0 4 0 4 1 Unknown protein Solyc11g073238.1 164 157 130 129 169 152 105 159 231 161 95 185 252 221 146 RNA-binding protein (AHRD V3.3 *** A0A2T6CUF4_9BACT) AT3G46020 Solyc11g073240.2 599 866 755 758 774 950 794 814 539 661 635 800 949 929 699 Protein FATTY ACID EXPORT 2, chloroplastic (AHRD V3.3 *** A0A1U8F2Y7_CAPAN) AT3G43520 Solyc11g073250.2 775 6284 6148 6499 9276 8298 8256 9027 4176 3239 4703 7002 2129 5089 2172 Histone H2A (AHRD V3.3 *** Q9ST30_SOLME) AT5G02560 Solyc11g073260.2 111 1695 1830 1728 2043 2478 2074 2254 1103 1082 1371 1797 599 1684 625 Histone H2A (AHRD V3.3 *** Q9ST30_SOLME) AT5G02560 Solyc11g073265.1 96 84 123 103 81 141 131 129 85 81 103 83 70 98 130 Unknown protein Solyc11g073270.1 92 189 149 162 183 164 210 202 187 128 105 154 113 158 100 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R6J4_9MAGN) AT5G59900 Solyc11g073280.2 3663 2927 2513 1964 1853 1688 1586 2208 1912 2486 2087 2167 2802 2444 2638 THO complex subunit 4A-like (AHRD V3.3 *** A0A2I4FWJ6_9ROSI) AT5G59950 Solyc11g073290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc11g073300.2 907 517 572 559 620 596 594 537 567 666 520 533 535 589 759 K-stimulated pyrophosphate-energized sodium pump protein (AHRD V3.3 *** F4JXE8_ARATH) AT5G59960 Solyc11g073310.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like kinase (AHRD V3.3 *-* A7VM42_MARPO) Solyc11g073315.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g005000.1 4 1 6 1 0 2 3 0 1 5 11 4 0 3 19 Unknown protein Solyc12g005010.2 735 1320 1288 1154 1679 1821 1846 1686 1875 1116 1363 1511 1503 1453 1082 Actin cytoskeleton-regulatory complex pan-like protein (AHRD V3.3 *** Q9LPT5_ARATH) AT1G50660 Solyc12g005020.2 291 513 320 483 582 638 674 554 474 485 349 697 379 444 301 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1MKC4_ARTAN) AT3G20395 Solyc12g005030.3 493 560 431 495 717 581 715 847 981 772 452 833 527 573 344 Calcium-dependent protein kinase (AHRD V3.3 *** Q9XER6_SOLTU) Solyc12g005040.2 815 717 875 1045 1048 1256 1446 813 983 966 1276 1132 1128 892 1010 Calcium-dependent protein kinase (AHRD V3.3 *-* Q9XER6_SOLTU) Solyc12g005050.2 201 407 582 640 728 700 701 598 515 367 604 584 382 453 541 AUGMIN subunit 4 (AHRD V3.3 *** AUG4_ARATH) AT1G50710 Solyc12g005060.1 140 188 141 176 211 191 182 190 220 139 118 207 203 175 207 ATP synthase gamma chain, chloroplastic (AHRD V3.3 *** A0A2G2X587_CAPBA) Solyc12g005070.2 42 96 105 182 151 155 167 96 117 79 75 96 115 102 126 CASP-like protein (AHRD V3.3 *** A0A2G3D0J5_CAPCH) AT5G54980 Solyc12g005080.2 2094 2482 2734 2343 2461 2326 2122 2199 2268 2055 2078 1947 3187 2565 2651 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (AHRD V3.3 *** B6TFG5_MAIZE) AT4G26910 Solyc12g005090.3 340 330 334 348 346 297 331 293 378 356 324 291 331 405 331 hypothetical protein (AHRD V3.3 *-* AT1G50730.3) Solyc12g150100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g005110.2 356 302 324 272 207 255 237 211 237 278 221 249 285 339 354 AT hook motif-containing protein (AHRD V3.3 *** Q8L7T9_ARATH) AT5G54930 Solyc12g005120.2 292 231 185 249 168 189 205 192 184 191 253 209 173 193 259 inositol-1%2C4%2C5-trisphosphate 5-phosphatase (AHRD V3.3 *-* AT5G54870.2) Solyc12g005140.2 108 154 188 172 178 211 185 181 149 172 123 149 228 221 146 Major facilitator superfamily protein (AHRD V3.3 *** A0A2U1MIY7_ARTAN) AT5G54860 Solyc12g005150.2 1165 646 1128 1049 834 863 702 605 794 940 1458 737 739 695 1671 Pollen Ole e 1 allergen and extensin family protein (AHRD V3.3 *** A0A2U1LZ35_ARTAN),Pfam:PF01190 AT5G54855 Solyc12g005160.3 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 Serine/threonine-protein kinase (AHRD V3.3 *** A0A1U8G1M9_CAPAN) AT3G20530 Solyc12g005170.2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 Cytochrome P450 (AHRD V3.3 *** W0FG45_POPTR) AT5G05260 Solyc12g005180.2 1068 975 1285 1150 1516 1416 1536 1254 1400 1046 1634 1174 1030 1071 1670 Chloroplast lipocalin (AHRD V3.3 *** Q38JB4_SOLTU) AT3G47860 Solyc12g005190.3 124 189 135 141 126 151 100 138 113 82 97 76 222 160 105 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1NN53_ARTAN) Solyc12g005200.3 195 269 213 249 298 245 307 348 319 271 200 318 335 342 233 Electron transfer flavoprotein subunit alpha, mitochondrial (AHRD V3.3 *** A0A2G2ZY23_CAPAN) AT1G50940 Solyc12g005210.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 MADS-box transcription factor ANR1 (AHRD V3.3 *-* A0A2G3CHN2_CAPCH) Solyc12g005220.2 140 132 154 151 120 103 139 111 192 169 120 112 116 117 176 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** F4JIR5_ARATH) AT5G54780 Solyc12g005230.3 565 543 578 682 452 384 495 392 441 642 492 337 571 467 380 Autophagy-related protein (AHRD V3.3 *** A0A2K3P5C5_TRIPR) AT5G54730 Solyc12g005240.1 348 675 656 510 584 489 470 648 648 722 613 578 703 624 520 plant/protein (DUF1995) (AHRD V3.3 *** AT3G20680.1) AT3G20680 Solyc12g005250.2 264 519 554 548 921 947 908 834 464 397 485 634 240 415 348 Kinesin-like protein (AHRD V3.3 *** A0A2G2X2E7_CAPBA) AT4G21270 Solyc12g005260.1 97 179 93 196 292 162 143 395 136 198 53 224 51 90 51 Kinesin-like protein (AHRD V3.3 *-* A0A2G2X2E7_CAPBA) Solyc12g005270.2 1279 2843 2599 2687 3661 3501 2957 3846 2248 2440 2268 3445 1762 2542 1578 Histone H2A (AHRD V3.3 *** A0A1U8E2W4_CAPAN) AT1G51060 Solyc12g005280.3 283 318 224 266 322 243 238 345 222 303 194 285 230 252 246 tRNA (guanine(37)-N1)-methyltransferase (AHRD V3.3 *** A0A1U8FMJ3_CAPAN) AT4G27340 Solyc12g005290.2 394 307 280 283 175 187 198 171 173 190 386 174 179 270 309 G-type lectin S-receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2G3C353_CAPCH) Solyc12g005300.2 383 272 666 826 23 36 19 9 294 364 288 111 230 304 203 Chlorophyllase 2 (AHRD V3.3 *** C1JZ62_9ROSI),Pfam:PF12740 Solyc12g005310.2 302 55 338 95 273 290 233 186 245 117 208 95 25 15 81 Auxin-responsive GH3 family protein (AHRD V3.3 *** A0A2U1LNK3_ARTAN) AT5G54510 Solyc12g005320.3 0 10 25 0 0 0 8 8 0 0 0 0 1 0 0 Pectin acetylesterase (AHRD V3.3 *** K4DB70_SOLLC) Solyc12g005330.2 6318 7159 5592 4598 5359 5216 4869 5711 4406 4520 4426 5040 6977 6126 5042 Ribosomal protein L2 (AHRD V3.3 *** A0A200QMJ3_9MAGN) AT4G36130 Solyc12g005340.3 1067 639 868 478 222 277 278 307 500 900 2328 658 506 507 970 Transcription factor GRAS (AHRD V3.3 *** A0A200QMI2_9MAGN) Solyc12g005350.2 17 37 74 52 112 102 117 225 37 39 64 81 22 54 38 Dihydroflavonol-4-reductase (AHRD V3.3 *** B6TUD3_MAIZE) AT4G27250 Solyc12g005360.3 0 0 13 3 1 1 3 1 0 2 0 6 0 0 0 MAP kinase kinase kinase 83 Solyc12g005370.2 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4DB75_SOLLC) AT3G01190 Solyc12g005380.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Diacylglycerol kinase (AHRD V3.3 *** A0A1U8FQ95_CAPAN) Solyc12g005390.2 1677 1109 1124 869 713 748 715 707 992 1297 1051 921 1843 1127 990 Vesicle-associated protein 4-1 (AHRD V3.3 *** A0A2G2Z5C6_CAPAN) Solyc12g005400.3 287 410 389 646 436 422 583 471 438 347 590 295 975 763 480 cyclic nucleotide-gated ion channel 4 (AHRD V3.3 *** A0A2I4H6P7_9ROSI) AT5G54250 Solyc12g005410.2 371 820 926 1090 1198 1337 1382 1433 1035 1019 854 1249 740 970 740 Bile acid:sodium symporter (AHRD V3.3 *** A0A200R883_9MAGN) AT1G78560 Solyc12g005420.2 22 22 34 40 51 77 51 68 35 101 50 72 63 88 117 B-box zinc finger protein 22 (AHRD V3.3 *** A0A1U8E1E2_CAPAN) AT1G78600 Solyc12g005430.1 51 1816 391 621 2073 1664 1727 2084 2808 1850 745 1759 1124 1240 209 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc12g005440.1 0 5 0 0 0 0 2 4 2 0 0 0 5 0 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc12g005450.1 29 36 116 12 0 5 1 3 3 13 64 20 44 21 42 Protein kinase domain (AHRD V3.3 *** A0A200QFW1_9MAGN) AT4G10390 Solyc12g005460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Rapid alkalinization factor (AHRD V3.3 *** S8CZN7_9LAMI) Solyc12g005465.2 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 early nodulin-like protein 1 (AHRD V3.3 *** A0A2I4FJE1_9ROSI) Solyc12g005470.2 1215 869 1112 1179 926 1051 1035 929 935 864 1181 771 854 937 1114 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L742_ARTAN) AT4G28370 Solyc12g005480.2 120 867 1069 1218 2189 2151 2106 2405 1215 575 926 1481 147 580 598 Protein TPX2 (AHRD V3.3 *** A0A2G3BMI4_CAPCH) AT1G03780 Solyc12g005490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF679 domain-containing protein (AHRD V3.3 *** A0A1Q3C1F0_CEPFO) Solyc12g005500.3 0 1 11 14 18 19 21 18 11 21 9 15 11 8 12 Prohibitin (AHRD V3.3 *** A0A200QL97_9MAGN) Solyc12g005510.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B1Z6_ARATH) Solyc12g005520.1 14 4 7 0 0 0 0 0 2 4 1 0 0 2 0 Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 --* AT1G12290.4) Solyc12g005530.1 40 7 15 3 0 0 0 3 4 7 19 0 25 13 5 Disease resistance protein (AHRD V3.3 *-* A0A2U1P5P8_ARTAN) Solyc12g005540.1 20 5 18 2 0 0 0 0 1 6 11 0 17 8 12 Disease resistance protein (AHRD V3.3 --* A0A2U1P5P8_ARTAN) Solyc12g005550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g005560.1 20 5 2 0 0 6 3 2 1 1 2 1 1 4 2 Sugar isomerase (SIS) family protein (AHRD V3.3 *-* A0A2U1LTS1_ARTAN) Solyc12g005570.2 260 381 485 408 458 435 491 460 432 346 511 352 410 402 474 hypothetical protein (AHRD V3.3 *** AT2G20820.1) AT2G20820 Solyc12g005580.2 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 Syntaxin-124-like protein (AHRD V3.3 *** A0A2K3PJM5_TRIPR) AT1G61290 Solyc12g005590.2 212 122 237 207 154 171 170 116 157 105 162 134 182 195 229 Protein laz1 (AHRD V3.3 *** A0A1J6IMD3_NICAT) AT4G38360 Solyc12g005600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Wound-responsive family protein (AHRD V3.3 *** AT4G28240.1) Solyc12g005610.3 35 21 17 4 0 0 1 0 16 39 2 3 44 36 11 Leucine-rich receptor-like kinase family protein (AHRD V3.3 *-* G7L9I8_MEDTR) Solyc12g005615.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc12g005620.1 188 117 88 84 13 11 7 4 60 117 59 28 352 161 81 receptor-like protein kinase (AHRD V3.3 *** A0A1U7YIF9_NICSY) Solyc12g005630.2 905 1357 1518 1192 1936 1673 1840 2035 1569 1540 1292 1247 1164 864 1176 Cytochrome b6-f complex iron-sulfur subunit (AHRD V3.3 *** A0A1U8G0H9_CAPAN) AT4G03280 Solyc12g005640.2 9 14 0 5 0 3 1 0 6 6 0 0 18 7 2 R2R3MYB transcription factor 68 Solyc12g005645.1 2 4 0 0 0 0 0 0 0 1 0 0 4 0 0 Unknown protein Solyc12g005650.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transmembrane protein (AHRD V3.3 -** AT1G77765.2) AT1G77765 Solyc12g005660.2 384 218 58 186 111 156 179 143 130 241 32 139 146 50 38 Zinc finger protein/CONSTANS-like protein (AHRD V3.3 *-* A0A2K3M573_TRIPR) AT4G27310 Solyc12g005670.2 2 0 0 11 2 15 9 7 2 5 0 3 0 0 0 HAK5 AT4G13420 Solyc12g005680.3 48 14 35 10 2 11 5 6 28 21 32 15 35 33 17 Potassium transporter (AHRD V3.3 *** Q5MWW0_CAPAN) AT4G13420 Solyc12g005690.1 8 17 32 33 22 8 26 15 12 13 9 13 21 16 23 transmembrane protein (AHRD V3.3 *-* AT3G09280.1) Solyc12g005700.2 316 153 307 294 325 327 276 279 126 246 337 211 177 126 329 DUF1218 domain-containing protein (AHRD V3.3 *** A0A1Q3CI94_CEPFO) AT2G32280 Solyc12g005710.3 2 1 8 0 0 6 6 4 0 3 4 3 1 3 12 Early nodulin-like protein 1-like (AHRD V3.3 *-* A0A2K3MXQ1_TRIPR) AT2G32300 Solyc12g005720.1 7 3 6 0 2 1 0 0 8 0 0 6 5 6 9 Cysteine-rich receptor-like protein kinase (AHRD V3.3 *** A0A2K3JS14_TRIPR) AT3G22060 Solyc12g005730.2 63 24 12 13 0 0 6 12 11 3 7 1 15 13 22 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CI87_CEPFO) AT1G05280 Solyc12g005740.1 0 6 0 8 0 0 0 0 3 0 1 0 3 0 0 Unknown protein Solyc12g005750.1 23 8 0 27 2 7 3 7 4 1 0 0 20 1 1 B-box zinc finger protein 32 (AHRD V3.3 *** A0A2G3BMP6_CAPCH) AT4G15248 Solyc12g005760.2 752 621 408 625 614 755 790 567 532 568 330 475 560 406 339 Peroxisome biogenesis protein 22 (AHRD V3.3 *** A0A1U8EC78_CAPAN) AT3G21865 Solyc12g005770.3 916 635 716 523 414 427 341 468 628 536 516 505 639 680 552 Zinc finger transcription factor 71 AT3G21810 Solyc12g005780.3 898 675 848 764 683 708 580 791 661 785 824 776 656 671 992 traB domain-containing protein-like (AHRD V3.3 *** A0A2I4HRB9_9ROSI) AT1G05270 Solyc12g005783.1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 Peroxidase (AHRD V3.3 *** K4CMV0_SOLLC) Solyc12g005787.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4CMV0_SOLLC) Solyc12g005790.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4DBB7_SOLLC) Solyc12g005795.1 3 9 0 9 20 42 29 14 2 1 3 17 0 4 0 Transcription factor TRY (AHRD V3.3 *** A0A1U8HG22_CAPAN) Solyc12g005810.1 0 0 3 2 0 0 0 0 0 0 2 1 0 0 0 Unknown protein Solyc12g005820.3 5 0 0 0 0 0 0 0 0 0 4 0 0 8 16 transmembrane protein (AHRD V3.3 *** AT3G21710.2) AT3G21710 Solyc12g005830.3 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Homeobox-leucine zipper protein ROC2 (AHRD V3.3 *** A0A2G3BMS2_CAPCH) Solyc12g005840.2 10 19 3 19 4 5 12 12 25 26 28 4 8 9 16 Ras-related small GTP-binding family protein (AHRD V3.3 *** A0A2U1P8S5_ARTAN) Solyc12g005850.2 128 348 222 238 241 303 282 300 265 211 256 163 383 323 283 Protein DETOXIFICATION (AHRD V3.3 *** A0A1J7GU23_LUPAN) AT3G21690 Solyc12g005860.2 5322 4098 2626 3326 4492 3902 3782 5525 5765 5788 3060 4284 3389 3853 3375 Aconitate hydratase (AHRD V3.3 *** Q9FVE9_TOBAC) AT2G05710 Solyc12g005870.3 1005 671 510 612 504 505 555 626 728 704 394 643 721 716 550 NEDD8-activating enzyme E1 regulatory subunit (AHRD V3.3 *** A0A2G3BMS5_CAPCH) AT1G05180 Solyc12g005880.2 195 87 66 108 33 17 8 6 53 40 35 38 89 126 287 Hexosyltransferase (AHRD V3.3 *** A0A2G3BMU2_CAPCH) Solyc12g005890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor GAMYB (AHRD V3.3 *** A0A2G2X253_CAPBA) Solyc12g005900.3 615 611 765 643 578 695 740 616 400 369 513 582 553 651 650 RecQ-mediated genome instability protein 1 (AHRD V3.3 *** A0A2G3BMT0_CAPCH) AT5G63540 Solyc12g005910.2 731 440 1060 363 244 244 258 270 394 859 973 426 558 514 864 B-cell receptor-associated 31-like (AHRD V3.3 *** A0A200QH03_9MAGN) Solyc12g005920.2 1 4 40 1 0 0 2 1 1 0 20 5 2 2 0 Fimbrin-4 (AHRD V3.3 *** A0A2G2YSR9_CAPAN) Solyc12g005930.2 442 394 271 281 384 339 387 372 297 317 273 342 307 381 418 Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** A0A2U1LL89_ARTAN) AT3G07890 Solyc12g005940.2 32 48 8 26 65 90 53 69 42 14 22 18 60 29 6 1-aminocyclopropane-1-carboxylate oxidase 2 (AHRD V3.3 *** Q7Y257_BETPN) Solyc12g005950.2 1659 896 706 930 651 783 921 665 751 1130 778 863 617 705 909 COP1 homolog AT2G32950 Solyc12g005955.1 58 12 12 46 25 30 46 13 26 43 38 28 17 43 33 Unknown protein Solyc12g005960.3 140 128 137 149 134 152 163 149 150 101 118 104 109 125 136 Ethylene-responsive transcription factor 3 (AHRD V3.3 *-* A0A2U1KRH6_ARTAN) Solyc12g005970.1 313 216 188 267 186 191 225 204 226 197 211 245 173 256 255 NBS-LRR protein (AHRD V3.3 *-* Q9SM52_SOLAC) Solyc12g005980.2 760 499 323 383 288 287 278 338 480 456 265 283 723 407 452 WLM domain-containing protein/PUB domain-containing protein (AHRD V3.3 *** A0A1Q3B398_CEPFO) AT5G35690 Solyc12g005990.2 1455 1026 1060 1241 951 1094 1037 936 865 1025 880 972 1154 1164 1089 Protein-tyrosine-phosphatase IBR5 (AHRD V3.3 *** A0A1U8E2D0_CAPAN) AT2G04550 Solyc12g006000.1 47 80 64 273 124 133 142 75 44 22 21 11 116 86 227 Clathrin coat assembly protein (AHRD V3.3 *** A0A1U8E4Q4_CAPAN) AT1G05020 Solyc12g006003.1 534 622 745 595 605 718 708 671 644 496 597 619 978 737 623 Small ubiquitin-related modifier (AHRD V3.3 *** A0A2G3BMW1_CAPCH) Solyc12g006007.1 15 17 79 71 33 39 43 27 9 10 57 38 30 55 49 Unknown protein Solyc12g006020.1 133 203 82 184 21 31 23 28 102 96 264 49 74 24 137 Receptor protein kinase, putative (AHRD V3.3 *** B9SKP2_RICCO) Solyc12g006030.2 317 344 365 379 277 400 298 297 329 259 353 331 413 415 385 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT4G28830.4) AT4G28830 Solyc12g006040.3 17 13 10 5 4 7 1 6 3 3 9 1 9 12 1 NBS-LRR protein (AHRD V3.3 *-* Q9SM52_SOLAC) AT5G45440 Solyc12g006050.2 277 213 21 61 14 25 24 37 94 310 46 70 109 166 563 Protein NRT1/ PTR FAMILY 6.4 (AHRD V3.3 *** A0A2G2X304_CAPBA) AT3G21670 Solyc12g006060.2 509 290 235 217 222 213 232 196 262 268 245 255 249 269 245 SAWADEE domain-containing protein (AHRD V3.3 *** A0A2U1MTI3_ARTAN) Solyc12g006080.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RPM1-interacting protein 4 (AHRD V3.3 *** A0A2G2WC31_CAPBA) AT2G04410 Solyc12g006090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane emp24 domain-containing protein p24beta2 (AHRD V3.3 *** A0A1U8F573_CAPAN) Solyc12g006100.2 0 0 0 0 0 0 0 0 1 1 0 2 3 0 0 Serine/threonine-protein phosphatase (AHRD V3.3 *-* A0A328DP52_9ASTE) AT1G48120 Solyc12g006110.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 fasciclin-like arabinogalactan protein 2 (AHRD V3.3 *** A0A1U8E1W9_CAPAN) AT4G12730 Solyc12g006120.3 223 181 186 223 199 192 113 155 295 219 259 221 189 273 300 Nuclear transcription factor Y subunit B (AHRD V3.3 *-* A0A2G2X323_CAPBA) AT4G14540 Solyc12g006130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A1J3HTG0_NOCCA) AT3G07870 Solyc12g006140.2 563 667 106 641 2633 2296 2166 2258 1038 1021 94 470 332 84 98 Cab-5 gene encoding chlorophyll a/b-binding protein AT3G27690 Solyc12g006160.2 2507 1411 2018 2362 1423 1229 1245 963 1234 1513 1922 1200 1852 1666 2848 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 *** AT3G07760.5) AT3G07760 Solyc12g006170.2 998 725 757 602 586 504 555 590 799 581 660 655 892 707 768 WRKY transcription factor 14 Solyc12g006180.2 560 826 890 1035 952 1117 940 1067 907 795 980 893 746 945 1260 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4JFN7_ARATH) AT3G07810 Solyc12g006190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nucleotide-diphospho-sugar transferase family protein, putative (AHRD V3.3 *-* A0A061EED4_THECC) Solyc12g006200.1 108 311 380 330 530 550 529 489 381 200 402 378 285 350 239 calcium ion-binding protein (AHRD V3.3 *** AT4G12700.1) AT2G04280 Solyc12g006210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta (AHRD V3.3 *-* A0A2G2X5Q2_CAPBA) Solyc12g006220.3 0 0 3 0 0 0 0 2 0 0 0 0 0 0 0 PGPS/D10 (AHRD V3.3 *** Q9ZTM9_PETHY) AT5G55980 Solyc12g006230.3 3132 853 531 1007 293 276 270 236 1209 1875 849 838 443 1088 1480 RING/U-box superfamily protein (AHRD V3.3 *** AT2G04240.2) AT2G04240 Solyc12g006240.2 1033 361 2515 1629 142 109 163 117 1342 550 2388 1231 801 2155 3152 Zinc finger protein CONSTANS-LIKE 9 (AHRD V3.3 *** A0A2G2YTW9_CAPAN) AT5G48250 Solyc12g006250.3 152 265 179 222 395 350 342 418 233 181 251 254 239 248 261 Vesicle transport protein (AHRD V3.3 *** A0A2G3BN67_CAPCH) Solyc12g006260.1 62 16 112 19 5 0 1 2 3 16 65 2 2 44 273 Glycine rich protein-interacting protein (AHRD V3.3 *** Q4U602_TOBAC) Solyc12g006270.2 31 309 255 317 643 609 582 855 265 154 260 342 89 145 119 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit (AHRD V3.3 *** Q6NMH7_ARATH) AT1G06660 Solyc12g006280.3 4 11 7 9 0 8 3 7 8 7 8 1 3 6 0 Homeodomain-like protein (AHRD V3.3 *-* A0A2U1MEU4_ARTAN) Solyc12g006290.2 513 753 876 739 1022 878 854 1018 1081 1051 981 1444 945 931 635 Reticulon-like protein (AHRD V3.3 *** A0A2G2YU67_CAPAN) AT3G10260 Solyc12g006293.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** Q9SFD2_ARATH) AT3G07820 Solyc12g006297.1 5 47 28 39 68 82 82 71 41 30 58 59 55 48 49 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (AHRD V3.3 *-* A0A1J3HP52_NOCCA) Solyc12g006300.2 46 67 53 46 72 61 85 95 71 61 7 57 71 46 51 WD repeat-containing protein 26-like (AHRD V3.3 *** A0A2I4E4P1_9ROSI) Solyc12g006310.2 75 212 183 179 251 282 278 274 228 211 167 252 252 232 169 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (AHRD V3.3 *** A0A1J3HP52_NOCCA) Solyc12g006313.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** Q9SFD2_ARATH) AT3G07820 Solyc12g006317.1 8 15 15 17 28 26 31 26 15 9 27 12 29 15 9 WD repeat-containing protein 26-like (AHRD V3.3 *-* A0A2I4E332_9ROSI) Solyc12g006320.3 5024 4284 4586 4300 3227 3438 3278 3065 3831 3125 3720 3490 2954 4368 4672 RNA helicase DEAD35 AT3G22330 Solyc12g006340.3 473 642 433 458 496 396 434 695 761 730 252 477 736 714 375 Auxin Response Factor 6 AT1G43950 Solyc12g006350.3 430 512 309 272 466 302 317 553 519 515 297 342 460 430 273 Auxin response factor (AHRD V3.3 *-* E0AD21_SOLLC) AT1G43950 Solyc12g006360.3 12 40 24 14 253 146 207 193 38 6 27 71 18 37 0 Protein DETOXIFICATION (AHRD V3.3 *** K4DBH3_SOLLC) AT3G59030 Solyc12g006370.3 303 280 602 368 240 298 300 199 278 276 336 239 328 222 316 Polyamine oxidase-like protein (AHRD V3.3 *** A0A2K3NN16_TRIPR) AT2G43020 Solyc12g006380.2 428 240 140 170 3 31 11 18 177 742 124 105 1232 226 171 2-oxoglutarate-dependent dioxygenase AT1G04350 Solyc12g006400.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g006410.3 350 202 616 339 167 209 180 147 166 366 413 214 282 245 306 UDP-glucose 4-epimerase (AHRD V3.3 *** A0A1Y1ITM0_KLENI) Solyc12g006420.2 1253 925 1090 872 530 501 487 589 813 1386 754 738 887 861 603 protein PAT1 homolog 1-like (AHRD V3.3 *** A0A2I4EXG6_9ROSI) AT4G14990 Solyc12g006430.3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** A0A0K9QKT6_SPIOL) AT3G22250 Solyc12g006440.2 23 18 54 42 8 15 15 6 44 19 66 45 13 32 76 transmembrane protein (AHRD V3.3 *** AT3G22210.1) AT3G22210 Solyc12g006450.2 115 46 76 105 10 17 16 30 37 75 43 22 50 43 98 gamma-aminobutyrate transaminase subunit precursor isozyme 3 AT3G22200 Solyc12g006460.2 582 3246 976 2335 2410 2068 2124 1981 5693 4133 3647 5497 3240 3092 1636 Cytochrome P450 (AHRD V3.3 *** A0A200PPF3_9MAGN) Solyc12g006470.2 1056 6922 2373 4728 6798 5216 5162 5711 16479 12098 9400 18304 6216 8024 3732 viroid RNA-binding protein Solyc12g006480.2 5347 3276 1889 1971 2035 1776 2000 2311 2085 2702 1628 2389 2160 2577 1952 Nuclear pore complex protein (AHRD V3.3 *** A0A2G2X455_CAPBA) AT5G51200 Solyc12g006490.2 214 330 364 296 312 324 321 279 283 232 286 197 353 295 327 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) Solyc12g006500.1 185 321 363 397 384 414 337 293 348 267 242 253 467 390 312 Nucleotide-sugar transporter family protein (AHRD V3.3 *** A0A2U1NGQ1_ARTAN) AT4G32390 Solyc12g006505.1 4 4 11 3 2 13 10 6 19 18 20 23 13 4 26 Terpene cyclase/mutase family member (AHRD V3.3 *** A0A2G3BN05_CAPCH) AT1G78950 Solyc12g006520.2 308 290 202 372 374 345 346 338 356 214 245 313 247 315 419 Terpene cyclase/mutase family member (AHRD V3.3 *** A0A2G3BN05_CAPCH) AT1G78950 Solyc12g006530.2 157 147 92 156 84 59 86 57 126 92 78 120 230 228 301 Terpene cyclase/mutase family member (AHRD V3.3 *** A0A2G3BN05_CAPCH) AT1G78950 Solyc12g006540.2 917 1545 1485 1342 1654 1553 1412 1476 1945 1201 1599 1552 2383 2195 1639 Signal peptidase I (AHRD V3.3 *** A0A1U8ECQ1_CAPAN) AT1G52600 Solyc12g006550.2 10680 6655 6008 4026 2745 2653 2292 2337 3346 2974 6300 3268 6771 5840 9137 Ribosome biogenesis regulatory protein (AHRD V3.3 *** A0A2G2YU70_CAPAN) AT2G37990 Solyc12g006560.3 1 1 0 1 0 0 1 0 2 2 18 0 0 0 3 Early nodulin-93 (AHRD V3.3 *** A0A1U8E1Q0_CAPAN) Solyc12g006570.2 29 258 139 341 37 51 85 50 2077 1353 3550 1776 335 688 508 Sesquiterpene synthase (AHRD V3.3 *** G5CV52_SOLLC) Solyc12g006575.1 19 51 51 26 55 58 53 44 48 28 42 32 34 46 46 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2X343_CAPBA) AT1G08070 Solyc12g006590.3 10 0 23 33 0 1 0 0 5 1 0 0 0 5 71 Zinc finger protein (AHRD V3.3 *** A0A200PQI4_9MAGN) AT2G26695 Solyc12g006600.3 0 3 14 3 0 1 0 0 2 1 0 0 0 1 3 Zinc finger protein (AHRD V3.3 *** A0A200PQI4_9MAGN) AT2G26695 Solyc12g006620.2 9 67 35 55 125 117 143 116 81 31 63 62 78 72 48 Zinc finger transcription factor 72 Solyc12g006630.2 13 11 18 39 20 12 8 13 20 25 34 28 27 41 52 Dynein light chain (AHRD V3.3 *** A0A2G2YUH7_CAPAN) AT5G20110 Solyc12g006640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lactoylglutathione lyase / glyoxalase I family protein (AHRD V3.3 *** A0A2U1MV65_ARTAN) Solyc12g006650.2 606 508 391 409 344 358 415 357 408 416 393 393 516 489 393 Mediator of RNA polymerase II transcription subunit 17 (AHRD V3.3 *** A0A2G2X341_CAPBA) AT5G20170 Solyc12g006660.2 75 83 112 125 111 154 131 85 65 55 107 93 94 66 178 testis- and ovary-specific PAZ domain protein (AHRD V3.3 *** AT5G20120.2) AT5G20120 Solyc12g006670.3 210 202 240 137 159 161 191 179 184 156 150 199 248 234 199 binding protein (AHRD V3.3 *** AT2G25570.3) AT2G25570 Solyc12g006680.2 5 0 6 1 1 0 0 3 1 2 5 0 1 0 9 Early nodulin-93 (AHRD V3.3 *** A0A2G2VER8_CAPBA) Solyc12g006690.2 332 559 664 679 1283 1295 985 1348 638 583 637 1007 525 765 371 Protein kinase PINOID 2 (AHRD V3.3 *** A0A2G3BN98_CAPCH) AT2G26700 Solyc12g006695.1 257 102 327 262 86 149 177 77 68 123 288 101 187 203 269 Unknown protein Solyc12g006700.3 1289 751 911 766 535 558 539 585 767 834 818 659 834 868 1042 DUF1644 domain-containing protein (AHRD V3.3 *** A0A1Q3BXX3_CEPFO) AT3G25910 Solyc12g006705.1 44 19 7 22 25 19 14 21 26 32 6 17 30 15 16 Unknown protein Solyc12g006710.3 151 193 159 149 139 187 178 163 190 98 90 101 241 183 219 Tudor domain protein (DUF1767) (AHRD V3.3 *** F4K2P4_ARATH) AT5G19950 Solyc12g006720.1 0 0 18 6 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g006730.1 0 3 2 1 0 1 0 0 4 0 0 0 0 0 0 Unknown protein Solyc12g006740.1 0 0 1 2 0 0 0 0 1 3 0 0 0 1 0 Unknown protein Solyc12g006750.1 0 0 6 0 0 0 0 0 2 0 0 0 0 0 0 Unknown protein Solyc12g006760.1 3 0 10 0 0 0 0 0 3 0 2 0 0 0 0 Unknown protein Solyc12g006770.1 15 2 22 11 0 0 0 2 6 1 2 1 0 3 16 Unknown protein Solyc12g006780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g006790.3 1037 803 883 976 785 873 705 920 619 921 586 902 591 842 670 Argonaute10b Solyc12g006800.2 746 792 1284 1055 756 692 761 573 655 855 1237 472 922 926 1639 myb family transcription factor EFM-like (AHRD V3.3 *** A0A2I4HNH6_9ROSI) AT2G03500 Solyc12g006805.1 187 185 69 153 253 142 95 113 63 127 18 69 202 49 83 SOUL heme-binding family protein (AHRD V3.3 *** Q8VZ90_ARATH) AT5G20140 Solyc12g006820.1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A1U8E9S6_CAPAN) Solyc12g006830.2 139 242 231 255 293 235 262 290 238 186 304 221 329 270 259 Histone H2A (AHRD V3.3 *** A0A1U8E2F1_CAPAN) AT1G52740 Solyc12g006840.2 121 90 119 48 0 1 0 1 8 43 111 3 111 138 52 Lectin protein kinase family protein (AHRD V3.3 *** A0A1I9LPL5_ARATH) AT3G16030 Solyc12g006850.2 181 195 433 398 32 69 59 35 246 213 368 138 236 182 934 LELKT1GEN L.esculentum potassium channel AT2G26650 Solyc12g006860.2 192 263 267 247 349 370 324 372 233 193 282 451 261 239 132 brassinosteroid hydroxylase AT2G26710 Solyc12g006870.2 1327 1536 1740 1650 1702 1537 1547 1647 1708 1359 1338 1588 1538 1602 1691 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** Q8L9X1_ARATH) AT5G20060 Solyc12g006880.2 227 372 443 437 510 492 507 516 317 282 470 350 492 417 449 PPPDE putative thiol peptidase family protein (AHRD V3.3 *** A0A2U1KMT1_ARTAN) Solyc12g006890.2 24 22 5 12 34 8 3 15 12 16 5 14 9 24 1 Unknown protein Solyc12g006900.1 1029 632 640 550 386 377 434 312 401 438 439 347 727 612 465 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3HNQ0_COCAP) AT1G49920 Solyc12g006920.2 1206 1982 2660 2154 2926 2885 3299 2512 2494 1973 2607 2072 1816 2335 3216 Serine/threonine protein phosphatase 2A regulatory subunit (AHRD V3.3 *** A0A1U8ECN3_CAPAN) Solyc12g006930.2 3265 3144 3791 4381 2555 2713 2642 2195 3212 3170 4118 3345 3500 2852 3909 Acyl-[acyl-carrier-protein] hydrolase (AHRD V3.3 *** A0A2G2X396_CAPBA) AT1G08510 Solyc12g006940.2 1419 890 911 1155 757 881 897 769 986 1138 846 841 826 1006 1101 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NXH1_ARTAN) Solyc12g006950.2 3 0 0 1 0 0 0 2 0 0 1 0 0 2 0 Sulfate transporter-like protein (AHRD V3.3 *** A0A2K3NYV6_TRIPR) Solyc12g006960.2 1 0 0 0 0 0 0 1 2 1 0 0 0 0 0 Sulfate transporter 3.2 (AHRD V3.3 *** A0A2G2YUG5_CAPAN) AT5G19600 Solyc12g006970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g006973.1 38 67 171 267 93 146 205 70 83 67 273 62 61 68 82 Leucine-rich repeat family protein (AHRD V3.3 *** A0A061GNA0_THECC) Solyc12g006977.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g006980.2 318 719 1704 4345 1057 1137 1979 856 1142 1712 2143 829 729 830 875 Leucine-rich repeat family protein (AHRD V3.3 *-* A0A061GNA0_THECC) AT4G13340 Solyc12g006990.2 3958 3356 3293 3395 3701 3248 3595 3447 3367 3631 3549 2842 3592 3068 3066 Arf GTPase activating protein (AHRD V3.3 *** A0A200PNF3_9MAGN) AT4G13350 Solyc12g006997.1 161 121 332 140 662 571 494 328 191 150 734 147 121 74 212 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *** A0A2U1NJ85_ARTAN) AT3G24450 Solyc12g007000.3 1666 1200 1097 1175 1152 1115 1048 916 1097 1333 1298 1213 1081 1126 1660 DUF538 domain-containing protein (AHRD V3.3 *** A0A1Q3D0V4_CEPFO) AT5G19590 Solyc12g007010.2 904 1106 630 763 1322 1166 1211 1375 920 1055 466 902 729 561 584 Iron-sulfur cluster carrier protein (AHRD V3.3 *** A0A2T0U724_9SPHI) AT3G24430 Solyc12g007020.2 49 637 480 728 1045 1087 1046 1389 773 402 550 948 159 400 246 DUF936 domain-containing protein (AHRD V3.3 *** A0A1Q3CPT5_CEPFO) AT4G13370 Solyc12g007030.3 329 303 162 207 162 152 154 146 425 322 162 237 251 213 241 Aldehyde dehydrogenase (AHRD V3.3 *** Q70T30_BIXOR) AT3G24503 Solyc12g007040.3 2 4 12 9 0 1 1 1 4 4 17 6 7 6 0 Protein kinase, catalytic domain-containing protein (AHRD V3.3 *** A0A2U1L8L5_ARTAN) Solyc12g007045.1 87 26 59 5 0 1 0 1 1 6 60 8 29 89 24 Arabinogalactan peptide 22 (AHRD V3.3 --* A0A2G2YUE4_CAPAN) Solyc12g007060.1 139 38 43 72 11 19 9 4 22 76 13 40 21 27 132 serine-rich protein-like protein (AHRD V3.3 --* AT5G55980.1) Solyc12g007070.2 752 362 306 473 199 136 176 141 513 421 455 536 327 607 1069 Heat shock transcription factor (AHRD V3.3 *-* A0A1Y1I763_KLENI) AT3G24520 Solyc12g007080.2 21 86 27 235 270 326 237 256 143 104 214 173 21 72 43 Unknown protein Solyc12g007090.2 307 192 166 251 179 215 250 219 277 300 201 285 191 187 215 thermosome subunit gamma (AHRD V3.3 *** AT5G19540.2) AT5G19540 Solyc12g007100.2 340 517 444 434 567 642 615 581 559 337 353 286 473 330 311 AAA-type ATPase family protein / ankyrin repeat family protein (AHRD V3.3 *** Q9C5C7_ARATH) AT3G24530 Solyc12g007110.2 1858 2321 2217 2784 2489 2145 2390 3142 2978 3898 3248 3388 2045 1943 1947 Proline-rich receptor-like protein kinase PERK1 (AHRD V3.3 *** A0A2G3AUM1_CAPCH) AT3G24550 Solyc12g007120.2 60 196 109 194 336 272 313 349 159 99 163 198 98 207 127 Signal peptidase I (AHRD V3.3 *** B2J5A2_NOSP7) AT3G24590 Solyc12g007130.2 985 858 911 856 795 838 849 640 640 770 1101 774 781 829 1108 Protein LIKE COV 2 (AHRD V3.3 *** A0A2G2ZPX7_CAPAN) AT2G20120 Solyc12g007140.3 253 298 359 432 443 401 394 357 457 305 579 347 216 289 525 hypothetical protein (AHRD V3.3 *-* AT5G42710.2) AT3G24630 Solyc12g007150.3 25 18 31 18 37 26 16 24 27 8 41 14 50 49 32 Rop guanine nucleotide exchange factor 12 (AHRD V3.3 *** A0A2G2X3H0_CAPBA) Solyc12g007160.2 49 333 251 387 761 569 651 718 344 237 205 333 249 298 166 ABI family (AHRD V3.3 *** A0A2U1KK95_ARTAN) Solyc12g007170.3 1698 1886 1692 1505 1356 1247 1296 1706 2367 3116 1339 1537 3388 2232 1183 Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a (AHRD V3.3 *** A0A2G3BNP7_CAPCH) AT4G29010 Solyc12g007180.2 215 224 100 217 185 203 200 207 163 135 199 196 219 173 107 Protein tesmin/TSO1-like CXC 5 (AHRD V3.3 *** A0A2G3BNP4_CAPCH) AT4G29000 Solyc12g007190.2 46 42 10 32 32 37 61 54 40 26 18 44 40 39 17 Protein tesmin/TSO1-like CXC 5 (AHRD V3.3 *-* A0A2G3BNP4_CAPCH) Solyc12g007200.2 1126 914 740 1019 929 926 848 815 1035 881 1044 886 956 1010 1114 Cyclin-dependent kinase F-1 (AHRD V3.3 *** A0A2G2YUH1_CAPAN) AT4G28980 Solyc12g007210.2 58 203 133 229 154 142 128 145 168 99 208 82 46 60 128 Rac-like GTP binding protein (AHRD V3.3 *** Q9S821_PHYPA) AT4G28950 Solyc12g007220.3 0 0 0 1 0 1 0 0 0 0 0 0 3 0 0 Protein NRT1/ PTR FAMILY 1.1 (AHRD V3.3 *** A0A2G2X3A7_CAPBA) Solyc12g007230.2 733 830 678 667 600 626 597 670 775 749 408 427 836 575 526 auxin-regulated IAA8 Solyc12g007240.3 7 1 0 13 0 2 1 0 1 7 0 2 0 5 31 hypothetical protein (AHRD V3.3 --* AT2G20080.2) AT4G28840 Solyc12g007250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G2YUJ1_CAPAN) AT4G28850 Solyc12g007260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G2YUJ1_CAPAN) AT4G28850 Solyc12g007270.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A2G2X3I0_CAPBA) AT4G28850 Solyc12g007280.3 1048 620 383 507 488 543 514 582 536 845 371 476 476 462 588 Casein kinase I isoform epsilon (AHRD V3.3 *** A0A2G2X3F7_CAPBA) AT4G28860 Solyc12g007285.1 399 257 405 286 282 413 403 223 240 293 331 258 235 319 455 Unknown protein Solyc12g007290.1 7 7 20 7 3 7 11 0 4 5 24 7 6 2 15 glutamic acid-rich protein-like (AHRD V3.3 *** XP_010314056.1) Solyc12g007300.1 87 56 79 50 26 48 30 24 45 62 58 55 79 56 93 B3 domain plant protein (AHRD V3.3 *-* G7IYP2_MEDTR) Solyc12g007310.3 932 1404 1133 1331 1338 1387 1498 1258 1416 982 1217 1286 1295 1499 1200 Lactoylglutathione lyase (AHRD V3.3 *** A0A2G3BNM5_CAPCH) AT1G67280 Solyc12g007320.1 3 0 0 2 0 0 2 0 0 5 0 4 16 1 3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QGT0_ARTAN) AT4G28890 Solyc12g008320.2 1 0 0 0 0 0 1 1 2 0 0 0 0 1 0 Sugar transporter protein 18 AT1G77210 Solyc12g008330.3 407 296 339 393 194 261 270 142 194 273 234 237 287 357 563 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (AHRD V3.3 *** A0A2G2X3L4_CAPBA) Solyc12g008335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g008340.2 355 373 398 431 432 527 572 438 505 399 496 402 445 425 524 Exostosin-like (AHRD V3.3 *** A0A200RC63_9MAGN) AT5G19670 Solyc12g008350.3 300 406 799 292 195 142 211 136 259 556 1180 349 359 144 266 dehydration responsive element binding protein 2 Solyc12g008360.2 5610 5604 6278 5364 4095 4606 4938 3851 4119 5583 5660 4049 8347 6938 6934 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A (AHRD V3.3 *** A0A2G2X3M2_CAPBA) AT5G19690 Solyc12g008370.3 3918 2358 1828 1410 1311 1416 1352 1453 2134 1853 1745 1824 1760 2122 2413 SNW domain-containing protein 1 (AHRD V3.3 *** A0A2G2YUR5_CAPAN) AT1G77180 Solyc12g008380.1 40 97 33 40 207 207 180 131 139 24 43 47 12 27 85 Avr9/Cf-9 rapidly elicited protein (AHRD V3.3 *** Q9ZU12_ARATH) Solyc12g008390.3 815 1120 1130 1099 1112 986 1128 1162 1420 939 995 974 1201 1184 1115 Golgin candidate 1 (AHRD V3.3 *** A0A2G2X3N0_CAPBA) AT2G19950 Solyc12g008400.2 326 212 232 309 88 128 95 153 244 190 164 193 264 223 232 LRR receptor-like serine/threonine-protein kinase EFR (AHRD V3.3 *** A0A1U8E9C9_CAPAN) Solyc12g008420.3 1813 1812 2350 2336 2809 2484 2481 2827 2098 2030 1943 2504 1514 1984 1837 RNA-dependent RNA polymerase (AHRD V3.3 *** A0A328CYP7_9ASTE) Solyc12g008430.3 14 7 3 0 10 24 6 11 11 13 5 17 1 6 8 Malic enzyme (AHRD V3.3 *** A0A2G3BMK9_CAPCH) Solyc12g008440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PQW6_ARTAN) AT4G12190 Solyc12g008450.2 113 222 119 150 162 168 144 180 180 132 118 142 222 184 136 Initiator tRNA phosphoribosyl transferase (AHRD V3.3 *** A0A200QDS0_9MAGN) AT2G40570 Solyc12g008460.2 551 527 1052 815 546 381 395 439 725 462 875 673 594 789 1062 Senescence/dehydration-associated protein-related protein (AHRD V3.3 *** A0A2U1Q0R2_ARTAN) AT4G15450 Solyc12g008470.2 97 300 387 364 439 322 379 314 350 227 454 402 295 355 471 Cytochrome B5-like protein (AHRD V3.3 *** A0A1U8EAT2_CAPAN) AT1G60660 Solyc12g008480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* O80757_ARATH) AT5G54990 Solyc12g008490.2 82 301 419 359 504 530 589 454 210 256 355 319 179 259 172 Nucleotide-diphospho-sugar transferases superfamily protein (AHRD V3.3 *** AT2G19880.2) AT2G19880 Solyc12g008500.2 594 293 244 145 18 17 13 12 104 243 184 41 309 417 332 receptor-like protein kinase 5 (AHRD V3.3 *** A0A1S4BN50_TOBAC) Solyc12g008510.2 680 342 195 176 205 227 241 175 134 235 173 143 89 202 161 hexokinase 3 AT4G29130 Solyc12g008520.2 141 176 149 163 358 296 229 214 145 86 149 164 151 143 137 SUN-like protein 32 Solyc12g008530.2 124 318 164 322 524 484 335 501 147 201 93 225 316 308 171 Pectinesterase (AHRD V3.3 *** A0A2G2YV59_CAPAN) AT5G19730 Solyc12g008540.2 81 95 101 129 118 98 100 96 103 111 80 92 118 130 46 Peptidase M28 family protein (AHRD V3.3 *-* A0A2U1PE30_ARTAN) Solyc12g008550.3 300 221 300 300 284 367 426 252 281 199 339 203 247 297 466 Peptidase M28 (AHRD V3.3 *-* A0A2U1PM28_ARTAN) Solyc12g008560.1 2969 1594 3547 1649 1517 1656 1483 1368 2928 4471 4424 2524 1750 2144 2939 Unknown protein Solyc12g008570.3 1109 1851 1158 1189 1424 1170 1201 1623 1206 1110 663 1111 1914 1608 884 Arginine-tRNA ligase (AHRD V3.3 *** A0A200QDP6_9MAGN) AT4G26300 Solyc12g008580.2 750 3298 2412 2247 6869 5902 6098 6868 3081 1572 2252 4423 1965 2549 1274 Glucan endo-1,3-beta-glucosidase 12 (AHRD V3.3 *** A0A2G2X3S4_CAPBA) AT5G56590 Solyc12g008590.3 1243 2731 1858 2065 2493 2317 2459 2252 2220 1904 1914 1849 2559 2286 2090 Profilin (AHRD V3.3 *** E0XJL2_GOSHI) Solyc12g008600.2 15 43 192 54 119 78 97 77 42 34 216 33 23 14 19 DUF1005 family protein (DUF1005) (AHRD V3.3 *** Q9M0F0_ARATH) AT4G29310 Solyc12g008610.3 4 9 14 28 30 10 15 15 12 4 7 12 9 10 14 Unknown protein Solyc12g008620.2 1621 839 1124 1209 913 955 804 886 1044 1473 1353 987 956 990 1369 Dual specificity phosphatase (AHRD V3.3 *** A0A200QPW3_9MAGN) Solyc12g008630.2 2744 4782 3010 3618 4153 3678 4023 4490 3869 3514 3056 3145 5430 4713 3602 Mitochondrial processing peptidase (AHRD V3.3 *** S8DRX8_9LAMI) AT1G51980 Solyc12g008640.3 483 607 766 882 819 690 836 820 782 661 687 770 721 729 859 Gamma-glutamyltranspeptidase (AHRD V3.3 *** A0A200QPW0_9MAGN),Pfam:PF01019 AT4G29210 Solyc12g008650.2 4 0 1 0 25 13 30 32 1 5 2 1 4 8 5 Inositol oxygenase (AHRD V3.3 *** A0A200QVH1_9MAGN) AT4G26260 Solyc12g008660.1 8340 2604 1013 2063 368 386 301 308 1367 3716 1054 1303 1579 2213 5047 Zinc finger transcription factor 73 AT2G19810 Solyc12g008670.2 141 64 64 52 5 8 2 7 32 75 37 10 88 46 40 blind-like4 Solyc12g008680.3 16 90 135 97 206 120 149 131 76 53 52 142 36 75 74 Unknown protein Solyc12g008690.3 264 463 476 460 618 640 636 636 614 376 417 466 625 520 489 IAA-amino acid hydrolase ILR1-like protein (AHRD V3.3 *** A0A2K3NR96_TRIPR) Solyc12g008700.3 2252 5105 5143 3210 4333 4047 3915 4107 3380 2335 4171 3291 6440 4946 4651 40S ribosomal protein S30 (AHRD V3.3 *** F2EKP2_HORVV) AT5G56670 Solyc12g008710.2 855 903 775 752 964 831 940 973 964 843 628 798 951 1041 1045 Insulinase (Peptidase family M16) protein (AHRD V3.3 *** A0A2U1P5D1_ARTAN) AT5G56730 Solyc12g008720.2 2902 5610 5431 3542 4740 4765 4778 4578 3917 2430 4284 3276 7415 5866 5146 60S ribosomal protein L31 (AHRD V3.3 *** A0A1U8EAP7_CAPAN) AT2G19740 Solyc12g008730.3 777 1270 1266 1152 1223 1287 1333 1204 860 839 991 905 1378 1150 1367 ATP synthase subunit G mitochondrial-like (AHRD V3.3 *** A0A2K3LBD4_TRIPR) Solyc12g008740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1-aminocyclopropane- 1-carboxylate synthase AT4G26200 Solyc12g008750.3 3711 2969 2532 2775 2670 2795 2875 2511 2495 2197 2445 2498 3004 3197 3117 U2 snRNP auxiliary factor large subunit (AHRD V3.3 *** A0A2I4F464_9ROSI) Solyc12g008760.3 1037 1711 1234 980 1010 988 1030 1025 1174 696 805 1135 1873 1616 1288 Protein arginine N-methyltransferase (AHRD V3.3 *** A0A1Y1IG62_KLENI) AT4G29510 Solyc12g008770.2 409 309 419 422 220 289 297 230 258 405 420 282 261 300 500 Mitochondrial substrate carrier family protein (AHRD V3.3 *** A0A1P8B7M7_ARATH) AT4G26180 Solyc12g008780.2 1153 995 701 1101 1106 1122 830 1064 861 1141 704 980 1000 1174 829 Serine acetyltransferase (AHRD V3.3 *** Q39533_CITLA) AT5G56760 Solyc12g008790.3 132 162 118 150 157 144 160 167 169 120 109 171 110 134 108 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (AHRD V3.3 *** D4HZ69_ERWAC) AT4G29540 Solyc12g008800.3 476 135 280 219 358 313 306 255 419 389 1022 409 102 81 98 Transcription factor DIVARICATA (AHRD V3.3 *** A0A2G3BNV9_CAPCH) AT5G56840 Solyc12g008810.2 844 742 739 679 576 625 642 603 598 681 716 507 976 754 675 Embryo defective protein (AHRD V3.3 *** A0A2U1KH21_ARTAN) AT4G29660 Solyc12g008830.3 37 102 44 113 0 12 7 0 118 54 53 22 61 73 85 GATA transcription factor 16 (AHRD V3.3 *** A0A2G2YUT6_CAPAN) AT5G56860 Solyc12g008840.2 736 201 203 219 31 63 41 45 160 176 188 119 96 202 175 beta-galactosidase 4 Solyc12g008850.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lysine-specific histone demethylase 1 like 1 (AHRD V3.3 *-* A0A2I0XG51_9ASPA) Solyc12g008860.3 351 485 626 605 539 586 694 495 430 423 499 562 872 714 712 transmembrane protein 258-like (AHRD V3.3 *-* A0A2I4F3D2_9ROSI) AT4G29735 Solyc12g008870.1 529 612 562 554 525 516 699 601 547 472 339 493 552 589 425 Zinc finger transcription factor 74 AT5G56900 Solyc12g008890.3 86 117 92 74 140 73 73 121 127 92 48 113 95 113 54 Zinc finger CCCH domain-containing protein 64-like (AHRD V3.3 *-* A0A2K3NZT0_TRIPR) Solyc12g008900.2 0 34 19 281 1 11 1 6 66 63 11 11 31 70 8 cytokinin oxidase6 AT5G56970 Solyc12g008910.2 365 675 859 777 845 1059 925 710 610 477 633 496 697 742 627 Translation machinery-associated protein 22 (AHRD V3.3 *** A0A1U8DZC1_CAPAN) AT5G11900 Solyc12g008920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytokinin dehydrogenase 5 (AHRD V3.3 *** A0A2G2X3Q3_CAPBA) AT5G56970 Solyc12g008930.3 26 25 18 1 0 0 0 0 0 0 0 0 9 13 0 Basic helix-loop-helix (BHLH) DNA-binding family protein (AHRD V3.3 *-* A0A2U1P678_ARTAN) Solyc12g008940.2 3074 4931 3128 2394 3671 3127 2907 3967 3070 2293 2489 2821 4760 3933 2586 Nucleosome assembly protein family (AHRD V3.3 *** A9TVZ4_PHYPA) AT2G19480 Solyc12g008950.2 50 54 71 43 67 83 71 68 35 59 76 48 51 63 106 DEAD-box ATP-dependent RNA helicase (AHRD V3.3 *** AT5G57000.1) AT5G57000 Solyc12g008960.2 347 223 307 276 112 192 159 136 236 167 365 215 413 427 344 Calmodulin-binding protein (AHRD V3.3 *** A0A2U1QIJ0_ARTAN) AT2G26190 Solyc12g008970.3 261 255 160 210 134 175 158 180 217 195 148 176 248 261 168 O-acyltransferase (AHRD V3.3 *** A0A2G2X3X8_CAPBA) AT2G19450 Solyc12g008980.3 143 365 380 446 586 595 603 536 397 336 447 532 265 374 486 Delta,Pfam:PF05834 AT5G57030 Solyc12g008990.2 184 178 103 103 100 131 125 113 106 76 92 92 172 139 90 Protein kinase domain (AHRD V3.3 *** A0A200Q1Z0_9MAGN) AT5G57035 Solyc12g009000.1 220 111 473 28 3 1 9 9 19 58 620 120 89 55 161 Harbinger transposase-derived nuclease (AHRD V3.3 *** A0A2U1Q453_ARTAN) AT5G12010 Solyc12g009010.2 2 3 2 5 0 2 4 4 4 2 5 4 0 1 0 Serine/threonine-protein kinase (AHRD V3.3 *** F8WL77_CITUN) Solyc12g009020.2 2728 2759 3209 2280 2103 2045 1979 2057 2153 3378 2410 1648 5168 2990 2102 MAP kinase kinase 1 AT4G29810 Solyc12g009030.2 598 790 656 768 886 750 764 903 691 669 474 756 865 772 560 WD40 repeat (AHRD V3.3 *** A0A200Q1Z4_9MAGN) AT4G29830 Solyc12g009040.3 103 154 190 167 72 105 94 100 116 54 70 43 205 242 224 Long chain acyl-CoA synthetase (AHRD V3.3 *** Q5W6W7_ORYSJ) Solyc12g009050.3 322 299 608 854 256 389 311 264 245 432 424 409 407 347 170 Nuclear transcription factor Y subunit A-6 (AHRD V3.3 *** A0A2G2X3U5_CAPBA) Solyc12g009060.2 1108 657 1169 709 460 488 408 499 789 805 833 530 1073 804 899 Vacuolar sorting-associated protein 2-like (AHRD V3.3 *** A0A2K3N074_TRIPR) AT2G06530 Solyc12g150101.1 257 506 466 634 1302 1431 1194 1102 484 429 584 498 307 201 415 Photosystem II reaction center X protein (AHRD V3.3 *** A0A2G2X3Z0_CAPBA) AT2G06520 Solyc12g009070.1 1 0 14 0 1 6 3 2 2 1 0 0 0 1 0 Unknown protein Solyc12g150102.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g009080.2 407 254 303 307 236 275 271 259 247 254 279 263 339 254 317 OBP3-responsive protein 4 (ORG4) (AHRD V3.3 *** Q8VY85_ARATH) Solyc12g009090.3 598 412 504 409 461 414 420 386 394 456 495 453 497 458 558 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *** A0A328DLS1_9ASTE) AT2G28230 Solyc12g009100.2 361 297 359 359 258 297 335 321 287 369 243 380 350 304 334 FRIGIDA interacting protein 1 (AHRD V3.3 *** F4IIB8_ARATH) AT2G06005 Solyc12g009110.3 6 10 21 33 8 8 9 12 14 3 11 18 8 27 7 O-methyltransferase, putative (AHRD V3.3 *** B9SUX6_RICCO) Solyc12g009120.2 362 535 725 572 650 690 707 667 535 340 482 539 628 669 579 Ring box protein (AHRD V3.3 *** C3SA59_BRADI) AT5G20570 Solyc12g009130.3 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 Protein LURP-one-related 6 (AHRD V3.3 *** A0A2G2YV39_CAPAN) AT2G05910 Solyc12g009140.3 2486 4011 4042 4114 4708 4621 4718 4423 4447 3460 3341 3910 5447 4833 3890 Proteasome subunit alpha type (AHRD V3.3 *** A0A1U8E914_CAPAN) AT2G05840 Solyc12g009150.2 440 501 491 600 362 424 410 383 465 337 702 283 458 553 864 Protein trichome birefringence-like 16 (AHRD V3.3 *** A0A2G3BP42_CAPCH) AT5G20680 Solyc12g009160.2 170 266 533 345 459 485 568 490 375 290 331 300 249 304 226 Inter-alpha-trypsin inhibitor heavy chain-like protein (AHRD V3.3 *** Q8L798_ARATH) AT1G19110 Solyc12g009170.2 3 24 18 84 2 2 3 0 2 8 0 4 14 13 17 U6 snRNA-associated Sm-like protein LSm1 (AHRD V3.3 *** A0A2G2X437_CAPBA) Solyc12g009180.2 1146 1384 1598 1616 1300 1271 1533 1280 1443 1546 1633 1651 1989 1527 1522 Cupin_5 domain-containing protein (AHRD V3.3 *** A0A1Q3BA35_CEPFO) AT1G19130 Solyc12g009190.2 0 0 5 0 0 1 0 0 0 0 0 0 0 0 0 pollen receptor-like kinase 3 (AHRD V3.3 *** A0A1S4C6B0_TOBAC) AT3G42880 Solyc12g009200.2 20 163 102 74 140 135 183 150 160 56 147 97 49 38 175 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3BP51_CAPCH) AT1G19150 Solyc12g009210.2 454 422 451 377 352 410 340 364 448 466 561 384 441 416 436 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1NPR9_ARTAN) AT1G19170 Solyc12g009220.2 551 1820 4846 329 579 507 373 627 1379 2709 2453 1747 1038 1036 469 jasmonate ZIM-domain protein 1 AT1G19180 Solyc12g009230.3 350 291 307 298 308 305 344 250 229 256 290 269 254 288 327 Oligouridylate binding protein-like protein (AHRD V3.3 *-* S8CVF4_9LAMI) Solyc12g009240.1 602 457 738 86 19 5 1 9 14 48 1414 423 327 125 556 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G3BP26_CAPCH) AT1G19210 Solyc12g009245.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 10 kDa chaperonin (AHRD V3.3 *-* A0A1U8HGQ0_CAPAN) Solyc12g009250.3 1003 1537 1664 1285 1269 1369 1421 1373 1609 1115 1422 1419 1648 1627 1528 10 kDa chaperonin (AHRD V3.3 *** A0A1U8HGQ0_CAPAN) Solyc12g009260.3 21 22 31 36 21 45 37 34 31 16 5 46 48 26 29 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** A0A2K3NYI3_TRIPR) Solyc12g009270.1 38 64 61 224 116 92 72 87 116 146 129 95 99 36 97 Plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 *** A0A061GSW0_THECC) AT5G20740 Solyc12g009280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Small auxin up-regulated RNA98 AT3G43120 Solyc12g009290.1 8 48 81 26 27 10 14 31 30 40 56 18 24 18 6 Auxin responsive SAUR protein (AHRD V3.3 *** A0A2U1PXP1_ARTAN) AT5G20820 Solyc12g009300.3 181 302 534 928 134 139 58 119 121 387 134 307 233 441 677 fruit sucrose synthase AT3G43190 Solyc12g009310.2 149 403 295 379 606 619 602 570 504 267 404 399 318 404 292 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1P9U5_ARTAN) AT2G07180 Solyc12g009320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g009340.2 563 535 598 557 603 534 544 580 704 561 445 561 580 575 463 MAP kinase kinase kinase 84 AT2G24360 Solyc12g009345.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g009350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1KQF7_ARTAN) Solyc12g009360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *-* A0A200R9B5_9MAGN) Solyc12g009370.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1KQF7_ARTAN) Solyc12g009380.2 851 1168 1824 1497 1790 1900 1687 1375 1110 796 1490 1248 1472 1309 1466 30S ribosomal protein S17 (AHRD V3.3 *** A0A2G3BP35_CAPCH) AT1G49400 Solyc12g009390.2 386 610 441 445 532 530 471 562 387 481 363 452 965 642 389 Zinc finger transcription factor 75 AT1G75340 Solyc12g009400.2 316 745 430 575 893 779 708 775 768 593 569 572 674 607 537 Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 *** A0A2G2YV76_CAPAN) AT1G01090 Solyc12g009410.2 799 1231 997 1064 1350 1359 1097 1697 1288 1058 941 1211 1148 994 891 Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 *** A0A2G2YV76_CAPAN) AT1G01090 Solyc12g009420.3 0 7 22 18 29 18 14 28 16 8 7 11 1 12 9 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1PQE9_ARTAN) Solyc12g009430.2 375 567 447 561 501 478 452 504 432 543 329 526 473 468 344 Methyltransferase FkbM (AHRD V3.3 *** A0A200QJ89_9MAGN) AT2G26680 Solyc12g009440.2 287 432 837 581 337 332 391 335 625 331 643 586 375 609 525 DnaJ/Hsp40 cysteine-rich domain superfamily protein (AHRD V3.3 *** Q9SN73_ARATH) AT3G47650 Solyc12g009450.3 105 59 72 55 22 19 23 24 45 81 54 26 61 70 46 NBS-LRR protein (AHRD V3.3 *** Q9SM52_SOLAC) Solyc12g009460.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *** AT5G35450.2) Solyc12g009470.2 466 372 361 365 408 409 369 483 448 499 318 400 289 365 291 yellow-green-2 AT2G26670 Solyc12g009480.2 188 191 305 195 170 238 222 200 231 344 163 237 144 249 252 SPX domain-containing protein (AHRD V3.3 *** A0A1Q3BK26_CEPFO) AT2G26660 Solyc12g009490.3 10 2 22 15 8 14 12 10 12 6 6 14 9 6 10 ethylene-responsive transcription factor WIN1-like (AHRD V3.3 *** A0A2I4GTJ5_9ROSI) Solyc12g009500.2 1158 698 823 693 652 764 667 523 487 631 653 645 553 620 828 Elongator complex protein 6 (AHRD V3.3 *** A0A2G2YVI7_CAPAN) AT4G10090 Solyc12g009510.1 29 21 7 39 0 0 0 0 38 27 19 28 25 14 6 receptor-like protein 12 (AHRD V3.3 *** A0A1S4DP57_TOBAC) AT1G47890 Solyc12g009520.2 199 141 155 87 16 15 12 15 140 105 120 49 150 233 109 receptor-like protein 12 (AHRD V3.3 *** A0A1S4DP57_TOBAC) AT3G05660 Solyc12g009530.1 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1S4DP57_TOBAC) AT3G05660 Solyc12g009535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) Solyc12g009550.2 3 6 5 6 14 6 5 5 10 21 12 9 1 10 0 Leucine-rich repeat receptor-like protein kinase PXL1 (AHRD V3.3 *-* A0A1D6GYD2_MAIZE) Solyc12g009560.2 5276 3437 5019 3611 1317 1637 1236 1280 3217 4828 6093 1892 1368 2616 4050 EIN3-binding F-box protein 1 Solyc12g009565.1 1 1 0 1 0 2 0 1 2 0 0 1 0 1 0 Unknown protein Solyc12g009570.3 429 486 505 573 450 455 491 392 508 336 463 446 607 584 463 calcineurin B-like interacting protein kinase Solyc12g009580.2 33 60 57 51 190 123 147 152 50 38 64 46 62 56 11 CRABS CLAW 5b Solyc12g009590.2 647 875 969 774 1203 1154 1115 1247 1241 636 962 1065 1160 1231 655 Methyl-CpG-binding domain-containing protein 11 (AHRD V3.3 *-* A0A2G2X4A8_CAPBA) Solyc12g009600.2 90 259 303 190 594 534 532 378 341 181 326 315 178 316 320 Thylakoid lumenal 16.5 kDa protein, chloroplastic (AHRD V3.3 *** A0A2G2YVM2_CAPAN) AT4G02530 Solyc12g009610.2 1465 863 960 819 577 615 647 663 1057 1104 810 731 1040 937 1142 RabGAP/TBC domain-containing protein (AHRD V3.3 *** A0A2U1MDC7_ARTAN) AT5G52580 Solyc12g009620.2 380 343 410 351 270 303 318 252 380 315 365 284 434 354 399 Ubiquitin system component Cue protein (AHRD V3.3 *** F4KED5_ARATH) AT5G32440 Solyc12g009630.3 141 186 173 347 162 89 135 71 129 176 151 87 124 185 190 Calmodulin-like protein 5 (AHRD V3.3 *-* A0A2G2YVH8_CAPAN) Solyc12g009640.1 2672 3216 2538 2543 3259 3216 3268 3468 3174 2568 2389 2897 2827 2814 1942 zinc finger BED domain-containing protein DAYSLEEPER-like (AHRD V3.3 *** A0A2I4F531_9ROSI) AT3G42170 Solyc12g009650.2 811 8811 2147 6820 2485 2053 2148 2544 3234 4171 4111 1099 2284 1254 1982 Sl proline-rich protein AT2G10940 Solyc12g009660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exostosin-like protein (AHRD V3.3 *** A0A2U1PY49_ARTAN) AT3G42180 Solyc12g009670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exostosin-like (AHRD V3.3 *-* A0A200PNR7_9MAGN) Solyc12g009680.2 285 298 332 427 363 291 284 248 275 332 343 292 324 324 420 Heptahelical transmembrane protein 1 (AHRD V3.3 *** A0A1U8E8P1_CAPAN) AT5G20270 Solyc12g009690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1S4DP57_TOBAC) Solyc12g009695.1 147 40 31 59 4 2 10 13 26 39 31 24 96 62 50 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1MY23_ARTAN) Solyc12g009710.1 1 0 5 0 0 0 0 0 0 1 0 0 0 0 0 synaptotagmin-5-like isoform X2 (AHRD V3.3 *-* XP_025884538.1) Solyc12g009720.3 15 5 0 6 0 0 0 0 0 6 4 0 13 3 6 receptor-like protein 12 (AHRD V3.3 *** A0A1U8E178_CAPAN) AT3G05660 Solyc12g009730.3 317 83 52 75 0 2 3 0 31 19 28 13 83 239 207 receptor-like protein 12 (AHRD V3.3 *** A0A1S4DP57_TOBAC) AT3G05660 Solyc12g009760.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* A0A2U1MY23_ARTAN) Solyc12g009770.2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g009780.1 132 22 14 22 0 1 0 0 4 50 21 0 53 62 13 receptor-like protein 12 (AHRD V3.3 *** A0A1S3Y203_TOBAC) AT3G05660 Solyc12g009790.2 501 555 810 606 600 549 663 597 713 539 872 530 783 692 738 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1MY23_ARTAN) AT1G05500 Solyc12g009800.3 312 460 698 1048 188 184 163 165 993 580 1804 275 354 495 1742 Purple acid phosphatase (AHRD V3.3 *** M1AD80_SOLTU) AT5G34850 Solyc12g009810.3 533 384 745 481 534 750 671 549 501 498 664 543 388 493 624 UDP-N-acetylglucosamine transferase subunit ALG13 (AHRD V3.3 *** A0A2K3MNU9_TRIPR) AT4G16710 Solyc12g009820.2 29 171 188 327 332 335 339 339 201 133 173 216 102 131 259 Monogalactosyldiacylglycerol synthase 3, chloroplastic (AHRD V3.3 *** A0A2G2X4B3_CAPBA) AT5G20410 Solyc12g009830.2 617 326 328 331 231 264 236 221 303 360 402 351 316 406 619 RING/U-box superfamily protein (AHRD V3.3 *-* Q8L7K7_ARATH) Solyc12g009840.2 58 265 199 220 295 375 310 387 318 219 247 211 221 237 142 Pyrophosphate-energized vacuolar membrane proton pump (AHRD V3.3 *** A0A2G3BP86_CAPCH) Solyc12g009850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Egg cell-secreted-like protein (DUF1278) (AHRD V3.3 *-* Q3EAM7_ARATH) AT3G48675 Solyc12g009860.3 1576 3238 3365 2150 3810 3658 3016 3429 2504 1575 2465 2989 3977 3374 2336 nucleolin-like (AHRD V3.3 *** XP_004251738.1) Solyc12g009870.2 26 0 0 0 0 1 0 0 0 0 0 0 0 2 4 F-box/LRR-repeat protein 14-like (AHRD V3.3 *** A0A2I4G8X3_9ROSI) Solyc12g009875.1 4 7 0 5 0 0 6 1 0 0 0 3 0 0 0 Unknown protein Solyc12g009880.1 215 147 99 107 95 89 102 102 82 129 95 41 91 125 115 Serine-rich protein (AHRD V3.3 *** E5GCC5_CUCME) Solyc12g009890.3 367 497 486 336 447 478 492 380 444 346 373 334 572 401 507 V-type proton ATPase subunit H (AHRD V3.3 *** A0A2G2X4D2_CAPBA) Solyc12g009900.3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 zein-binding protein (Protein of unknown function%2C DUF593) (AHRD V3.3 *-* AT5G57830.1) Solyc12g009910.1 0 0 0 0 0 0 0 0 0 1 7 0 0 1 0 Glycosyltransferase (AHRD V3.3 *** A0A288W8G2_GARJA) Solyc12g009920.1 16 17 12 18 12 12 11 9 47 33 92 15 29 27 103 Glycosyltransferase (AHRD V3.3 *-* A0A288W8G2_GARJA) Solyc12g009930.3 446 3040 625 1714 990 949 866 944 5158 2756 3810 4467 2871 3217 2690 Glycosyltransferase (AHRD V3.3 *** A0A288W8G2_GARJA) Solyc12g009940.2 166 248 182 232 468 363 298 467 325 187 198 349 245 268 164 Glycosyltransferase (AHRD V3.3 *** A0A288W8G2_GARJA) Solyc12g009950.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4DC83_SOLLC) Solyc12g009960.2 2690 2957 2668 2845 2711 3189 3473 2936 2757 2472 2777 2150 2838 3150 3952 Eukaryotic translation initiation factor isoform 4G-1 (AHRD V3.3 *** A0A2G3BP61_CAPCH) AT5G57870 Solyc12g009970.2 791 401 437 430 415 385 370 385 368 590 607 473 374 403 491 hypothetical protein (AHRD V3.3 *** AT4G30630.1) AT4G30630 Solyc12g009980.2 243 581 751 541 590 463 477 561 618 406 459 512 709 739 556 Nucleoid-associated protein (AHRD V3.3 *** A0A1J3J8Y5_NOCCA) Solyc12g009990.2 2083 1824 1664 1660 1769 1881 1898 1828 1999 1921 1754 2083 1922 1868 1601 Signal recognition particle receptor subunit alpha (AHRD V3.3 *** A0A2G2YVH0_CAPAN) AT4G30600 Solyc12g010000.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 early nodulin-like protein 1 (AHRD V3.3 *** A0A2I4FPV7_9ROSI) Solyc12g010010.2 1784 1119 1395 1047 767 799 727 937 1663 1582 1519 1388 1244 1369 1142 Cyclic nucleotide-gated channel 6 (AHRD V3.3 *** A0A2U1KIM7_ARTAN) AT5G57940 Solyc12g010020.3 21 185 330 433 196 262 261 151 5018 717 426 1296 38 767 59 Leucine aminopeptidase A1 AT4G30920 Solyc12g010030.3 9 33 68 94 29 98 87 39 2809 169 89 305 9 246 63 Leucine aminopeptidase, chloroplastic (AHRD V3.3 *** AMPL_SOLTU) Solyc12g010040.2 3675 3831 2492 2592 2521 2490 2471 2981 3686 3306 2351 2847 4748 4021 3084 leucine aminopeptidase A AT4G30920 Solyc12g010050.2 283 686 946 671 792 954 843 721 769 363 783 642 563 787 695 DNA-3-methyladenine glycosylase I (AHRD V3.3 *** A0A2I0WS59_9ASPA) AT5G57970 Solyc12g010060.2 21635 15802 20437 18139 15660 14207 14603 11743 12521 12151 15895 12717 16371 14656 22162 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** Q6S021_CAPAN) AT1G13950 Solyc12g010070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g010080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2WAS9_CAPBA) Solyc12g010090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *-* A0A1J3EXP5_NOCCA) Solyc12g010100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A2G2WAS9_CAPBA) Solyc12g010110.3 192 104 151 299 59 39 50 42 147 184 151 80 97 197 363 Formin-like protein (AHRD V3.3 *** A0A2G3BXE8_CAPCH) Solyc12g150103.1 10 0 11 16 6 6 9 0 8 8 28 5 6 7 57 Unknown protein Solyc12g010120.2 151 225 259 292 312 281 272 294 370 243 394 277 219 212 305 Reticulon-like protein (AHRD V3.3 *** A0A2G2X4H4_CAPBA) AT5G58000 Solyc12g010130.1 1016 1691 986 1426 2023 2707 2386 1799 2126 1263 1184 1479 1263 1605 1654 Non-specific serine/threonine protein kinase (AHRD V3.3 *** G4XMX2_SOLLC) AT4G30960 Solyc12g010140.2 45 17 2 53 16 9 12 6 12 15 6 14 22 18 48 Unknown protein Solyc12g010150.3 65 120 107 79 81 142 118 82 102 62 83 88 119 89 78 Cytochrome c oxidase%2C subunit Vib family protein (AHRD V3.3 *** AT5G58005.2) AT5G58005 Solyc12g010160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g010170.2 0 17 27 35 14 19 21 10 36 20 20 29 35 45 18 bHLH transcription factor 070 AT2G24260 Solyc12g010180.2 1189 1708 3969 2988 2828 3396 3217 3286 1301 3064 1928 3337 1574 2251 1826 Anthranilate synthase component II (AHRD V3.3 *** B6T2R9_MAIZE) AT5G57890 Solyc12g010190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g010200.2 24 40 31 38 18 51 55 38 16 20 17 28 18 36 56 Hexosyltransferase (AHRD V3.3 *** A0A2G3CCZ7_CAPCH) AT1G06780 Solyc12g010210.2 0 0 0 0 5 0 1 1 0 0 0 0 0 0 0 Eukaryotic translation initiation factor 6 (AHRD V3.3 *** A0A2I4DGM7_9ROSI) Solyc12g010220.3 173 131 219 143 110 102 149 81 91 131 204 119 164 150 80 ABC transporter ATP-binding protein (AHRD V3.3 *** A0A365X934_9ACTN) AT1G63270 Solyc12g010230.2 92 151 204 266 322 343 346 243 241 164 228 241 159 194 284 Calcineurin-like metallo-phosphoesterase superfamily protein (AHRD V3.3 *** A0A2U1LQM8_ARTAN) AT4G30993 Solyc12g010250.1 3 7 2 5 6 5 7 1 10 10 7 8 10 5 17 Unknown protein Solyc12g010270.1 13 16 26 12 14 17 12 11 25 14 8 18 12 8 27 Unknown protein Solyc12g010280.1 2 2 0 10 0 3 2 3 2 11 13 5 2 2 6 Unknown protein Solyc12g010290.1 67 41 19 68 35 15 38 39 81 58 67 38 28 48 35 Unknown protein Solyc12g010300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g010310.2 376 208 423 394 147 236 257 150 213 203 434 160 164 230 413 Unknown protein Solyc12g010320.2 814 865 727 777 931 819 820 956 914 760 546 767 1058 786 883 temperature-induced lipocalin AT5G58070 Solyc12g010330.2 1125 1159 1025 983 965 1099 978 1012 1030 889 980 950 1093 1075 766 Two-component response regulator (AHRD V3.3 *** A0A2G2X4J0_CAPBA) AT2G25180 Solyc12g010340.3 88 98 113 103 106 138 114 148 127 74 122 77 174 126 90 PHD finger-like domain-containing protein 5A (AHRD V3.3 *** A0A1U8E1D6_CAPAN) AT1G07170 Solyc12g010350.3 1369 2865 4312 2347 3129 3890 3166 2757 1635 1333 2825 2055 3825 3288 3638 60S ribosomal protein L39 (AHRD V3.3 *** B6SP72_MAIZE) AT4G31985 Solyc12g010360.2 0 6 33 0 0 0 0 1 2 0 0 0 0 0 0 Plasma membrane ATPase (AHRD V3.3 *** A0A1U8E8S2_CAPAN) Solyc12g010370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 protein ULTRAPETALA 1-like (AHRD V3.3 *** A0A2I4DNL4_9ROSI) Solyc12g010380.3 174 269 118 291 346 304 385 381 427 224 218 284 268 166 155 Adenylate kinase (AHRD V3.3 *** A0A2U1NM67_ARTAN) AT5G35170 Solyc12g010390.2 1189 2345 1830 1957 1842 1987 2096 2122 1758 2216 1978 1857 1931 1816 1535 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G3CD11_CAPCH) AT5G35160 Solyc12g010400.2 358 649 1555 723 1158 1233 1171 614 972 732 1921 1010 558 764 1622 hypothetical protein (AHRD V3.3 *-* AT2G46490.1) AT5G35110 Solyc12g010410.3 49 33 20 31 14 4 2 0 8 15 24 1 30 52 101 Homeobox protein knotted-1-like 3 (AHRD V3.3 *** A0A1U8H944_CAPAN) Solyc12g010420.1 128 42 316 5 0 0 2 3 5 71 344 38 20 29 131 hypothetical protein (AHRD V3.3 --* AT5G11070.1) Solyc12g010430.1 529 167 262 244 93 94 100 101 145 545 318 197 148 154 160 hypothetical protein (AHRD V3.3 --* AT5G35090.1) Solyc12g010440.3 202 73 199 93 64 90 89 58 148 116 237 113 142 102 102 Glycerol-3-phosphate transporter 5-like protein (AHRD V3.3 *** A0A2K3L617_TRIPR) AT2G13100 Solyc12g010450.3 272 224 454 258 235 305 312 256 340 316 488 283 298 317 397 Protein phosphatase 2C (AHRD V3.3 *** B4FDN2_MAIZE) Solyc12g010460.2 1 15 31 73 33 33 27 18 11 21 40 54 5 33 11 Unknown protein Solyc12g010470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PLATZ transcription factor family protein (AHRD V3.3 *** A0A2U1NVF3_ARTAN) AT2G12646 Solyc12g010480.2 15 51 57 124 144 93 112 120 72 110 52 77 15 60 32 Heptahelical transmembrane protein 2 (AHRD V3.3 *** A0A2G3CD54_CAPCH) AT4G30850 Solyc12g010490.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2YVB3_CAPAN) AT1G16060 Solyc12g010500.3 17 8 30 20 26 22 28 7 20 7 15 7 12 12 26 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1NQN4_ARTAN) AT3G47180 Solyc12g010510.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Oxysterol-binding protein-related protein 2B (AHRD V3.3 *** A0A2G3CD16_CAPCH) Solyc12g010520.3 882 1217 921 770 631 654 643 687 947 718 741 704 1507 1383 922 Eukaryotic peptide chain release factor subunit 1 (AHRD V3.3 *** A0A1U8EAC7_CAPAN) Solyc12g010530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** A0A2U1N0Z9_ARTAN) Solyc12g010540.1 601 750 1390 484 638 458 487 445 678 337 2086 907 846 425 1272 UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** A0A1U8F5Z6_CAPAN) Solyc12g010550.1 259 158 556 509 10 15 15 13 144 153 338 113 128 252 1410 counting factor 45-1-like (AHRD V3.3 --* XP_013669773.1) Solyc12g010560.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2G3CD35_CAPCH) Solyc12g010570.1 27 16 23 18 7 19 16 14 10 32 30 21 34 42 42 Tetraspanin (AHRD V3.3 *** A0A200Q8V3_9MAGN) AT2G23810 Solyc12g010580.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein ECERIFERUM 3 (AHRD V3.3 *-* A0A2G2YVD3_CAPAN) Solyc12g010585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor bHLH36-like (AHRD V3.3 *** A0A2I4FJG0_9ROSI) Solyc12g010590.3 105 290 386 271 296 268 242 276 531 188 315 334 308 349 202 O-acyltransferase WSD1-like protein (AHRD V3.3 *** A0A2K3N315_TRIPR) Solyc12g010595.1 0 0 0 0 11 0 0 1 2 8 0 9 21 11 10 transcription factor bHLH36-like (AHRD V3.3 *** A0A2I4FJG0_9ROSI) Solyc12g010600.3 0 3 13 0 1 9 2 2 3 3 0 0 12 1 8 RNA polymerase 2 second largest subunit 2 Solyc12g010610.3 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 Unknown protein Solyc12g010620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 Unknown protein Solyc12g010630.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g010640.3 394 302 285 303 406 328 315 297 319 382 232 322 334 324 380 hypothetical protein (AHRD V3.3 --* AT5G57790.4) AT5G57790 Solyc12g010650.1 159 222 134 194 266 251 224 185 232 108 220 187 213 220 196 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** Q9SD94_ARATH) AT5G07900 Solyc12g010655.1 15 9 20 32 6 22 16 18 31 15 46 13 11 14 28 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) Solyc12g010660.1 0 0 3 0 0 0 0 0 2 2 0 0 0 0 0 NBS-LRR protein (AHRD V3.3 *-* Q9SM52_SOLAC) AT1G52660 Solyc12g010670.1 0 1 0 1 0 0 5 1 0 0 0 0 0 0 11 E3 ubiquitin-protein ligase RMA1H1 (AHRD V3.3 *** A0A1U8FIB2_CAPAN) AT4G03510 Solyc12g010680.3 93 91 90 100 101 87 101 45 71 47 69 65 130 96 68 Acetyltransferase (AHRD V3.3 *** B6TUE4_MAIZE) AT1G03650 Solyc12g010690.2 95 136 223 139 140 181 150 99 177 79 281 112 116 109 164 Polyol monosaccharide transporter 3 AT2G20780 Solyc12g010700.2 8 14 17 13 39 26 44 19 15 7 20 15 19 18 23 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* A0A2U1Q5E5_ARTAN) AT2G14830 Solyc12g010710.1 36 20 7 11 1 0 1 0 14 1 48 2 16 14 20 Unknown protein Solyc12g010720.1 1 21 6 16 11 1 13 7 24 15 9 6 6 11 0 Protein EPIDERMAL PATTERNING FACTOR 1 (AHRD V3.3 *** A0A2G2YTN2_CAPAN),Pfam:PF17181 AT2G20875 Solyc12g010730.2 324 244 354 357 277 403 423 289 420 548 549 453 195 345 502 DUF789 domain-containing protein (AHRD V3.3 *** A0A1Q3CP56_CEPFO) AT4G03420 Solyc12g010740.3 1565 1150 1533 1365 984 1191 1265 1025 1193 1181 1471 1296 1077 1450 1817 protein STRUBBELIG-RECEPTOR FAMILY 3-like (AHRD V3.3 *** A0A1U8E575_CAPAN) AT4G03390 Solyc12g010750.2 87 168 151 234 253 206 224 257 198 163 148 195 146 150 84 Secretory carrier-associated membrane protein (AHRD V3.3 *** A0A2G3B9M4_CAPCH) AT2G20840 Solyc12g010755.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 protein ULTRAPETALA 1-like (AHRD V3.3 *** A0A2I4DNL4_9ROSI) Solyc12g010770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g010780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PN10_ARTAN) Solyc12g010790.2 1349 1556 2301 1840 1827 2084 1927 1417 1591 1336 2478 1314 1443 1602 2455 RAB GTPase (AHRD V3.3 *** A0A2U1Q460_ARTAN) Solyc12g010800.2 9 181 91 57 76 79 80 33 130 10 73 45 27 45 57 Basic-leucine zipper (BZIP) transcription factor family protein (AHRD V3.3 *** A0A1I9LST2_ARATH) AT2G42380 Solyc12g010810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOB domain-containing protein 2 (AHRD V3.3 *** A0A2G3BMI6_CAPCH) AT1G06280 Solyc12g010820.2 224 82 135 119 104 111 127 99 92 86 150 88 85 182 435 Late embryogenesis abundant protein (AHRD V3.3 *-* A0A200QFG9_9MAGN) Solyc12g010830.2 1374 539 635 627 469 404 478 383 433 622 690 496 419 509 936 hypothetical protein (AHRD V3.3 *-* AT2G31130.6) AT2G31130 Solyc12g010840.2 7795 5948 5013 4626 5856 5511 5714 6558 4869 5667 4109 5980 5252 5629 4972 Ketol-acid reductoisomerase (AHRD V3.3 *** M1ADA6_SOLTU) AT3G58610 Solyc12g010850.1 53 136 142 131 135 122 171 98 167 72 192 197 87 129 111 hypothetical protein (AHRD V3.3 *-* AT1G06320.1) AT1G06320 Solyc12g010860.2 358 954 850 675 1039 1000 1169 1266 918 564 562 926 897 822 569 tft8 AT2G42590 Solyc12g010870.3 212 175 98 155 200 195 214 195 170 183 102 168 224 200 180 ATP synthase protein I-related protein (AHRD V3.3 *** A0A2U1Q771_ARTAN) AT2G31040 Solyc12g010890.2 518 408 410 444 380 340 424 448 342 577 294 487 451 408 357 trihelix transcription factor ASIL1-like (AHRD V3.3 *** A0A2I4FFS5_9ROSI) AT3G58630 Solyc12g010900.1 1513 564 463 463 455 380 496 444 345 1004 463 485 230 452 526 F-box protein MAX2 (AHRD V3.3 *** A0A2G2X2R2_CAPBA) AT2G42620 Solyc12g010910.2 67 201 140 122 300 314 226 327 268 189 181 149 126 132 182 Phospholipase A1-IIdelta (AHRD V3.3 *** A0A2G2YTM0_CAPAN) AT2G42690 Solyc12g010920.2 20 14 4 1 0 1 0 0 0 0 0 0 0 18 3 Oleosin (AHRD V3.3 *** A0A2G2YTI7_CAPAN) AT3G01570 Solyc12g010930.2 1142 2330 1924 1321 2069 2123 1949 1831 1329 959 1551 1493 2793 2191 1704 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) AT3G58700 Solyc12g010940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 DUF1685 family protein (AHRD V3.3 *-* AT2G42760.1) Solyc12g010950.2 19 78 83 153 33 48 42 30 118 35 76 48 34 33 183 2-alkenal reductase (NADP(+)-dependent) (AHRD V3.3 *** A0A1U8EE67_CAPAN) AT5G16990 Solyc12g010960.2 43 272 74 129 143 124 104 85 138 157 27 52 139 122 17 2-alkenal reductase (NADP(+)-dependent) (AHRD V3.3 *** A0A2G2WX40_CAPBA) AT5G16990 Solyc12g010980.3 75 3694 1902 1861 4373 4113 3792 3913 2507 3050 1116 2673 2096 2337 388 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc12g010990.3 4 4 0 2 2 0 0 0 0 1 5 0 1 1 9 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2U1QA65_ARTAN) AT1G06470 Solyc12g011000.2 1533 1541 1336 1214 1606 1404 1321 1808 2043 2065 1165 1987 2182 1694 1090 Citrate synthase (AHRD V3.3 *** A0A2G3BMF7_CAPCH) AT3G58750 Solyc12g011010.2 49018 70281 55017 108225 47612 46532 41588 55592 56009 107660 48338 107147 95587 76341 38435 Protodermal factor 1 (AHRD V3.3 *-* A0A2G2YT94_CAPAN) AT2G42840 Solyc12g011020.2 35 55 62 96 61 98 95 93 81 69 67 64 103 83 61 Haloacid dehalogenase (HAD) superfamily protein (AHRD V3.3 *** A0A2U1ND25_ARTAN) AT3G58830 Solyc12g011023.1 0 33 94 6 4 1 4 0 5 1 104 5 1 1 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** Q6RHX7_SOLLC) Solyc12g011027.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 protein FAR1-RELATED SEQUENCE 5-like (AHRD V3.3 *** A0A2I4FDV7_9ROSI) Solyc12g011030.3 1 6 43 4 0 4 5 0 7 2 68 3 4 4 0 xyloglucan endotransglucosylase-hydrolase 9 Solyc12g011033.1 283 340 259 424 465 436 454 368 787 398 1052 451 403 328 626 Lipoxygenase (AHRD V3.3 *** K4DCJ0_SOLLC) AT3G45140 Solyc12g011037.1 30 33 7 37 33 35 42 50 116 27 42 52 25 28 35 Lipoxygenase (AHRD V3.3 *-* K4DCJ0_SOLLC) Solyc12g011050.2 2335 1828 1606 1575 1824 1587 1638 1647 1779 1680 1627 1707 1692 1860 1768 Flowering time control protein FPA (AHRD V3.3 *** A0A2G3BMA4_CAPCH) AT4G12640 Solyc12g011060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 *** A0A200PQI4_9MAGN) AT2G26695 Solyc12g011070.3 13 15 3 34 11 11 4 10 20 14 16 14 18 5 14 Vacuolar cation/proton exchanger (AHRD V3.3 *** K4DCJ3_SOLLC) Solyc12g011080.3 3 11 7 12 0 2 2 0 6 10 8 2 0 1 0 Vacuolar cation/proton exchanger (AHRD V3.3 *-* K4CGE4_SOLLC) Solyc12g011085.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc12g011090.3 27 9 11 15 0 0 0 0 7 0 13 3 1 19 7 Unknown protein Solyc12g011100.2 1 0 0 5 0 0 0 0 53 3 0 1 2 5 15 Unknown protein Solyc12g011110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ADP-glucose pyrophosphorylase small subunit CagpS2 (AHRD V3.3 --* NP_001352225.1) Solyc12g011120.3 2 0 0 0 0 0 1 5 0 0 0 0 5 0 2 Glucose-1-phosphate adenylyltransferase (AHRD V3.3 *** K4DCJ8_SOLLC) Solyc12g011130.2 120 137 245 152 200 157 170 214 212 142 245 157 178 218 188 Rab family GTPase (AHRD V3.3 *** A0A1Y1I8A7_KLENI) AT4G17170 Solyc12g011140.3 70 149 231 307 220 232 246 177 183 226 272 135 145 136 131 Subtilisin-like protease (AHRD V3.3 *** A0A2G3BMA9_CAPCH) AT2G04160 Solyc12g011150.1 16 3 0 5 0 0 0 0 0 0 4 0 18 33 2 Unknown protein Solyc12g011160.2 472 725 586 676 595 561 578 583 1045 826 706 814 998 908 758 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 (AHRD V3.3 *** A0A2G2YT91_CAPAN) AT1G06550 Solyc12g011170.3 32 61 208 147 103 95 49 35 82 120 281 48 23 53 205 Phospholipase D (AHRD V3.3 *** K4DCK3_SOLLC) Solyc12g011180.3 881 759 743 808 718 760 903 755 784 723 800 685 813 902 856 Transcription factor IIIC, subunit 5 (AHRD V3.3 *** A0A2U1L539_ARTAN) AT5G24450 Solyc12g011190.2 281 299 364 261 312 422 387 325 287 206 391 320 338 335 387 Plant regulator RWP-RK (AHRD V3.3 *** A0A1R3KFR0_9ROSI) Solyc12g011200.3 29 43 59 38 83 64 62 58 54 37 61 49 53 22 21 WRKY transcription factor 28 Solyc12g011210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g011215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor HHO6-like (AHRD V3.3 *** XP_025884461.1) Solyc12g011230.1 13 3 1 5 3 0 0 0 5 4 5 1 7 4 2 Unknown protein Solyc12g011233.1 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MNN8_TRIPR) Solyc12g011237.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor HHO6-like (AHRD V3.3 *-* XP_025884461.1) Solyc12g011250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb family transcription factor-related protein (AHRD V3.3 *-* B6TBR6_MAIZE) Solyc12g011255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor HHO6-like (AHRD V3.3 *** XP_025884461.1) Solyc12g011270.2 804 841 779 578 569 484 545 597 565 594 546 602 943 908 757 ethylene-responsive elongation factor EF-Ts precursor AT4G11120 Solyc12g011280.2 263 961 421 581 2605 2608 2584 2490 904 619 352 795 217 159 270 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A0F7H004_9ROSI) AT1G61520 Solyc12g011290.2 156 811 689 837 1807 1739 1723 1918 1101 533 911 1220 316 560 444 Kinesin-4 (AHRD V3.3 *** A0A2G2X2M3_CAPBA) AT1G72250 Solyc12g011300.2 0 0 1 0 0 0 0 0 0 1 0 0 0 7 0 Glutathione S-transferase (AHRD V3.3 *** Q9FQE8_SOYBN) Solyc12g011310.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase-like protein (AHRD V3.3 *** A0A2K3N2T5_TRIPR) Solyc12g011320.2 38 14 12 8 3 7 5 1 6 9 6 6 21 8 9 Glutathione S-transferase (AHRD V3.3 *** Q9FQE8_SOYBN) Solyc12g011330.4 774 612 692 565 519 609 569 622 611 746 655 641 582 625 559 ethylene receptor 1 AT1G66340 Solyc12g011340.2 1108 1587 1837 2103 2061 2305 2334 1813 1470 1238 1571 1516 1843 1799 1705 Polyadenylate-binding protein-interacting protein 10 (AHRD V3.3 *** A0A2G2YTF8_CAPAN) AT3G14450 Solyc12g011350.3 28 20 13 17 15 9 2 12 4 32 92 7 4 31 62 Unknown protein Solyc12g011360.2 37 48 97 63 124 148 92 136 50 40 52 93 30 63 46 Interactor of constitutive active ROPS 1-like protein (AHRD V3.3 *** A0A2K3NH99_TRIPR) AT1G78430 Solyc12g011370.3 263 353 384 341 295 252 200 302 483 498 289 598 270 326 279 Cationic amino acid transporter (AHRD V3.3 *** A0A2K3LDF0_TRIPR) AT1G17120 Solyc12g011390.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 glycine-rich cell wall structural protein 1-like (AHRD V3.3 *** XP_010314080.1) Solyc12g011400.3 76 111 121 128 57 120 80 113 99 78 141 117 139 115 136 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2X5L1_CAPBA) AT1G53600 Solyc12g011410.1 46 63 32 138 57 43 38 35 51 36 77 28 82 58 226 Unknown protein Solyc12g011420.2 448 163 114 116 14 51 44 42 49 88 105 48 100 187 231 C2 domain-containing protein (AHRD V3.3 *** A0A2G2X5L7_CAPBA) AT1G53590 Solyc12g011430.3 94 71 70 44 17 21 24 30 49 86 66 70 97 73 100 Beta-lactamase-like (AHRD V3.3 *** A0A200QS30_9MAGN) AT1G53580 Solyc12g011440.2 1240 662 377 467 446 406 407 479 498 902 479 575 490 414 251 60S ribosomal protein L18a-like protein (AHRD V3.3 *-* A0A2G2Z4N3_CAPAN) Solyc12g011450.2 6692 7357 1544 6182 13162 12266 13024 12351 6230 8778 2126 4666 3599 1478 1844 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A1U8G201_CAPAN) AT5G54270 Solyc12g011455.1 70 424 484 417 444 474 521 498 301 186 358 335 217 351 227 Histone H2B (AHRD V3.3 *** A0A218W9S6_PUNGR) Solyc12g011460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g013480.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g013470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *-* K4BQ49_SOLLC) Solyc12g013490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain-containing protein (AHRD V3.3 *-* A0A1Q3CQC0_CEPFO) Solyc12g013500.2 340 277 338 287 434 430 393 316 261 234 333 353 318 309 352 hypothetical protein (AHRD V3.3 *-* AT3G13677.3) Solyc12g013510.1 45 363 348 303 328 297 298 359 208 139 192 247 100 298 112 Histone H2B (AHRD V3.3 *** A0A328DBY2_9ASTE) Solyc12g013520.3 3 14 17 24 6 14 16 11 12 10 11 12 27 33 19 Unknown protein Solyc12g013530.2 1570 704 832 780 594 533 479 658 735 977 990 706 765 675 861 Unknown protein Solyc12g013535.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc12g013540.2 638 526 477 399 442 388 389 497 461 465 506 353 615 477 509 Unknown protein Solyc12g013550.2 462 753 977 800 1129 1009 1012 1030 694 566 833 700 876 629 698 hypothetical protein (AHRD V3.3 *** AT2G20820.1) AT2G20820 Solyc12g013560.2 177 180 363 379 476 512 475 309 330 230 429 364 175 285 422 PAP-specific phosphatase HAL2-like (AHRD V3.3 *** A0A2G2ZXI6_CAPAN) AT5G54390 Solyc12g013570.2 17 10 36 44 6 3 0 3 12 8 37 4 15 24 28 Plant cadmium resistance 2, putative (AHRD V3.3 *** A0A061E1P7_THECC) Solyc12g013580.3 496 386 297 424 521 410 439 461 398 494 426 424 236 417 436 Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic (AHRD V3.3 *** A0A1U8GBH5_CAPAN) AT3G15520 Solyc12g013590.2 8 31 40 21 19 19 28 21 52 38 14 22 26 39 23 UvrD-like Helicase, ATP-binding domain, P-loop containing nucleoside triphosphate hydrolase (AHRD V3.3 *** A0A2U1Q6X2_ARTAN) Solyc12g013600.3 187 140 142 160 68 62 80 45 143 140 114 90 273 170 175 UvrD-like Helicase, ATP-binding domain, P-loop containing nucleoside triphosphate hydrolase (AHRD V3.3 *** A0A2U1Q1T0_ARTAN) Solyc12g013610.2 4 0 0 2 0 2 0 0 1 0 1 0 5 1 13 Calmodulin-binding protein (AHRD V3.3 *** G7JMG3_MEDTR) Solyc12g013620.2 3341 821 269 238 22 10 8 14 164 1044 277 92 236 1412 2682 jasmonic acid 2 AT4G27410 Solyc12g013630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter G family member 21 (AHRD V3.3 *** A0A2G3BLU7_CAPCH) AT4G27420 Solyc12g013640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter G family member 21 (AHRD V3.3 *** A0A2G3BLU7_CAPCH) AT4G27420 Solyc12g013650.2 73 55 86 137 34 26 24 31 20 32 76 21 76 38 209 DUF1218 domain-containing protein (AHRD V3.3 *** A0A1Q3DB07_CEPFO) AT1G52910 Solyc12g013655.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3L8G7_TRIPR) Solyc12g013660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2Z3R5_CAPAN) Solyc12g013670.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** A0A2G2YE99_CAPAN) Solyc12g013680.3 11 13 1 5 0 0 2 0 0 6 15 1 14 42 47 receptor-like protein 12 (AHRD V3.3 *** A0A1S3Y203_TOBAC) Solyc12g013690.2 154 119 53 62 78 60 103 57 56 196 92 77 264 107 65 Monooxygenase (AHRD V3.3 *** Q8H9C4_SOLTU) AT4G38540 Solyc12g013700.2 4382 721 392 256 444 398 355 328 483 4046 545 842 261 260 152 stem-specific protein TSJT1-like (AHRD V3.3 *** A0A2I4H4H1_9ROSI) AT4G27450 Solyc12g013710.2 392 1197 1041 935 2787 2953 3678 1874 1313 1283 1351 1551 849 1454 1135 light dependent NADH:protochlorophyllide oxidoreductase 1 AT4G27440 Solyc12g013720.1 3 0 0 0 0 1 1 1 0 0 0 1 0 0 0 Monooxygenase (AHRD V3.3 *** Q8H9C4_SOLTU) Solyc12g013730.3 7 1 0 0 12 3 0 1 1 0 0 1 17 3 0 Receptor-like protein (AHRD V3.3 *-* G7KCN9_MEDTR) Solyc12g013740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *** A0A1U8E178_CAPAN) AT3G05660 Solyc12g013750.2 2844 1728 1695 1474 1289 1497 1465 1170 1148 1727 1618 1319 1696 1604 1322 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *-* A0A2G2YDS5_CAPAN) Solyc12g013770.3 31 14 17 20 12 25 16 17 12 10 34 15 24 21 27 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** A0A2G2YDQ8_CAPAN) Solyc12g013780.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9LJ65_ARATH) Solyc12g013790.3 829 830 1369 722 795 940 771 549 642 366 1087 569 1203 1074 1057 RNA-binding protein 25 (AHRD V3.3 *-* A0A2I4H2H9_9ROSI) AT5G53800 Solyc12g013800.3 2054 1758 2269 3478 1931 2139 2618 1861 1630 2528 2408 2200 2134 2240 2007 E3 ubiquitin-protein ligase rma1h1-like protein (AHRD V3.3 *** A0A2K3P2S4_TRIPR) AT4G27470 Solyc12g013810.2 737 658 878 712 994 797 899 817 685 702 681 801 586 577 1001 Thioredoxin (AHRD V3.3 *** A0A2U1L6J8_ARTAN) AT3G15360 Solyc12g013820.3 578 249 439 165 558 597 533 582 158 546 274 443 139 222 95 Ubiquitin-conjugating enzyme (AHRD V3.3 *-* A0A200QWS6_9MAGN) AT1G53025 Solyc12g013830.2 5 3 0 0 0 0 0 0 0 0 0 0 4 7 0 Unknown protein Solyc12g013840.3 1839 1718 296 830 1960 2122 1822 2028 878 1227 294 880 894 343 335 Protein SPA1-RELATED 3 (AHRD V3.3 *** A0A2G2VZ51_CAPBA) AT3G15354 Solyc12g013850.2 2 1 3 0 0 0 0 1 1 0 3 2 0 8 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** F4JIW2_ARATH) AT4G27480 Solyc12g013860.2 1 4 10 5 5 2 3 10 1 1 0 1 1 0 0 Proton pump-interactor 1 (AHRD V3.3 *** A0A2G2Z555_CAPAN) Solyc12g013870.3 941 971 1322 1224 1233 1368 1543 1070 902 934 1134 961 927 1027 1098 RNA-binding S4 domain-containing protein (AHRD V3.3 *** A0A2U1NIP7_ARTAN) AT1G53120 Solyc12g013880.2 374 441 297 246 346 311 337 475 330 309 221 331 382 462 298 Origin recognition complex subunit 3 (AHRD V3.3 *** A0A2U1N3V6_ARTAN) AT5G16690 Solyc12g013890.2 1276 1538 1048 1831 1533 1751 1888 1431 1260 1222 1481 1513 931 1083 1101 embryo defective 2737 (AHRD V3.3 *** AT5G53860.2) AT5G53860 Solyc12g013895.1 2 0 7 2 0 0 2 0 1 2 0 0 1 4 0 Rapid alkalinization factor (AHRD V3.3 *** S8CZN7_9LAMI) Solyc12g013900.3 7279 5172 5020 3960 5655 4575 4801 5518 4976 7443 5312 5222 5683 4290 4897 Early nodulin-like protein 1 (AHRD V3.3 *-* A0A2G2X2X1_CAPBA) AT4G27520 Solyc12g013910.2 343 281 370 277 340 260 281 260 262 300 334 332 393 333 250 PRA1 family protein (AHRD V3.3 *** A0A2G2X2T8_CAPBA) AT4G27540 Solyc12g013920.2 1071 456 328 401 218 228 195 217 299 395 294 275 419 369 418 Protein yippee-like (AHRD V3.3 *** A0A1U8EEB0_CAPAN) AT5G53940 Solyc12g013930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcriptional corepressor LEUNIG-like (AHRD V3.3 *-* XP_019067025.2) Solyc12g013935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3LWA1_TRIPR) ATMG00240 Solyc12g013940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcriptional corepressor LEUNIG-like (AHRD V3.3 *** A0A2I4H8H0_9ROSI) Solyc12g013950.2 1067 619 544 460 469 387 414 434 615 698 521 490 578 601 682 Sec1 family domain-containing protein MIP3 (AHRD V3.3 *** A0A2G3BC24_CAPCH) AT2G42700 Solyc12g013960.3 374 208 218 101 17 37 21 35 126 306 331 109 295 263 164 DUF688 domain-containing protein (AHRD V3.3 *** A0A1Q3CVC4_CEPFO) AT2G30990 Solyc12g013970.3 204 315 401 374 388 461 533 415 384 355 487 432 352 402 452 Protein kinase domain (AHRD V3.3 *** A0A200QT30_9MAGN) AT3G58640 Solyc12g013990.3 1656 1950 1622 1713 1498 1576 1628 1737 1065 1123 1263 1530 1903 1790 1554 50S ribosomal protein L1 (AHRD V3.3 *** A0A1J3CLY7_NOCCA) AT2G42710 Solyc12g014000.3 55 37 37 28 32 33 42 45 45 31 34 27 30 51 47 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QM34_9MAGN) AT3G15200 Solyc12g014010.2 907 632 92 72 166 123 169 125 139 682 59 165 2911 155 102 Glycosyltransferase (AHRD V3.3 *** Q94IF2_TOBAC) AT3G21750 Solyc12g014020.2 145 94 129 121 102 139 109 113 96 137 120 117 99 82 102 Nucleic acid-binding%2C OB-fold-like protein (AHRD V3.3 *** AT5G63690.2) AT5G63690 Solyc12g014040.1 275 621 735 964 1317 1159 1007 1440 1012 961 864 1353 553 666 430 Serine/Threonine-kinase pakA-like protein (AHRD V3.3 *-* AT3G15095.1) Solyc12g014050.2 1056 834 1029 1111 1229 1285 1185 937 979 1033 1030 888 775 833 1121 Zinc-binding dehydrogenase, putative (AHRD V3.3 *** Q8LBA4_ARATH) AT3G15090 Solyc12g014060.2 1025 751 1102 857 736 863 853 561 676 657 975 625 737 835 835 RNA exonuclease 4 (AHRD V3.3 *** A0A1U8F956_CAPAN) AT3G15080 Solyc12g150104.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit c, chloroplastic (AHRD V3.3 *** A0A191T4D9_SPIMX) Solyc12g014070.2 2280 1060 915 996 994 799 879 883 1000 1716 1020 971 873 963 870 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L356_ARTAN) AT1G53190 Solyc12g014080.2 308 547 395 386 409 366 384 473 496 337 391 350 505 391 312 RAB GTPase (AHRD V3.3 *** A0A2U1Q460_ARTAN) Solyc12g014090.2 848 423 388 269 179 178 207 151 277 282 301 302 465 423 447 TAF RNA polymerase I subunit A (AHRD V3.3 *** AT1G53200.1) AT1G53200 Solyc12g014100.2 2297 768 700 661 490 442 389 482 573 1341 691 601 720 768 1122 homogentisate 1,2-dioxygenase AT5G54080 Solyc12g014110.2 501 568 635 763 950 1009 921 944 751 748 620 894 652 674 417 Sodium/calcium exchanger family protein / calcium-binding EF hand family protein (AHRD V3.3 *** A0A2U1MZE4_ARTAN) AT1G53210 Solyc12g014120.3 928 840 1069 1110 870 940 1344 771 646 557 840 476 978 856 906 WAS/WASL-interacting protein family member 1 isoform X1 (AHRD V3.3 *-* XP_020550010.1) Solyc12g014130.2 7 35 29 13 40 30 25 22 23 23 59 12 2 32 97 SUN-like protein 33 AT3G15050 Solyc12g014140.3 97 114 227 237 94 91 100 69 157 65 131 169 70 145 85 SlTCP3 AT3G15030 Solyc12g014150.3 111 155 175 156 170 188 219 195 229 151 174 227 169 215 139 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MQS6_ARTAN) AT1G73170 Solyc12g014160.3 22 22 55 20 29 37 51 16 20 22 63 26 24 23 80 Unknown protein Solyc12g014170.2 1180 883 977 887 616 778 652 657 724 707 786 795 760 819 913 Transcription factor gte4 (AHRD V3.3 *** A0A1J6J3A7_NICAT) AT1G06230 Solyc12g014180.2 150 523 395 385 400 407 504 489 315 229 309 388 692 534 458 Malate dehydrogenase (AHRD V3.3 *** A0A2G2X2U9_CAPBA) AT1G53240 Solyc12g014190.2 587 379 304 280 162 223 233 212 260 291 186 242 330 328 317 tRNA dimethylallyltransferase 9 (AHRD V3.3 *** A0A2G2VFT1_CAPBA) AT5G20040 Solyc12g014200.3 1 12 2 9 41 18 28 17 11 7 4 14 3 22 17 Protein trichome birefringence-like 31 (AHRD V3.3 *** A0A2G2X2L8_CAPBA) AT1G73140 Solyc12g014210.3 1852 2036 1208 961 1275 1006 909 1208 1520 1222 791 1312 2238 1608 989 RNA-binding (RRM/RBD/RNP motif) family protein (AHRD V3.3 *** A0A2K3L2Z0_TRIPR) Solyc12g014220.3 339 413 638 413 618 724 638 498 538 246 752 434 356 465 931 muscle M-line assembly protein (AHRD V3.3 *-* AT1G53800.3) AT1G53250 Solyc12g014230.2 1528 2551 1703 1284 1207 1180 1206 1415 1580 1191 1209 1555 4035 2991 1347 Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial (AHRD V3.3 *-* A0A2G3BCH1_CAPCH) AT3G15000 Solyc12g014240.3 0 9 44 0 0 0 8 3 0 1 0 0 1 0 0 Pollen Ole e 1 allergen/extensin (AHRD V3.3 *** A0A200QS67_9MAGN) AT5G45880 Solyc12g014250.2 3261 3589 2170 2791 3833 3895 3899 4236 3760 4370 2171 3136 3720 2695 2543 Phosphoenolpyruvate carboxylase (AHRD V3.3 *** A0A2G2VCE6_CAPBA) AT3G14940 Solyc12g014260.1 15 3 9 7 62 52 48 30 1 11 5 14 6 2 39 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 (AHRD V3.3 *** A0A2G3BCH5_CAPCH) Solyc12g014270.3 199 631 424 745 766 571 717 920 683 779 544 731 543 735 368 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (AHRD V3.3 *** A0A2G2WG60_CAPBA) AT3G14920 Solyc12g014280.2 129 282 323 222 311 378 314 255 282 131 258 256 325 344 315 RNA-binding CRS1 / YhbY (CRM) domain protein (AHRD V3.3 *** A0A2U1NZ44_ARTAN) AT2G28480 Solyc12g014290.2 790 765 711 540 574 482 486 574 799 435 610 648 836 784 685 Multiprotein bridging factor 1 (AHRD V3.3 *** S4T643_CAPAN) AT3G58680 Solyc12g014300.3 0 0 0 0 1 0 1 0 3 0 0 0 2 0 0 Transcription factor (AHRD V3.3 *** A0A2U1MTT1_ARTAN) Solyc12g014310.2 467 713 675 528 831 708 808 669 1428 504 771 506 503 556 833 pathogenesis-related family protein (AHRD V3.3 *** AT1G78780.5) AT1G78780 Solyc12g014320.2 170 340 200 170 267 280 280 334 201 151 156 241 280 251 156 Anaphase-promoting complex subunit 6 (AHRD V3.3 *** A0A2G2X2K1_CAPBA) AT1G78770 Solyc12g014330.1 138 98 121 91 121 102 107 124 112 105 74 125 109 129 81 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0VRQ5_9ASPA) AT1G53330 Solyc12g014340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 IRK-interacting protein-like (AHRD V3.3 *-* A0A2I4G928_9ROSI) Solyc12g014350.3 1336 759 1258 1104 459 444 492 358 991 883 1511 543 841 1456 1400 LRR receptor-like serine/threonine-protein kinase (AHRD V3.3 *** A0A2U1L198_ARTAN) AT1G53430 Solyc12g150105.1 0 4 0 1 0 0 0 0 1 0 5 0 1 0 0 Leucine-rich repeat transmembrane protein kinase (AHRD V3.3 *-* A0A2U1LC02_ARTAN) Solyc12g014360.2 103 202 278 344 223 288 299 291 385 279 266 257 273 240 160 protein trichome birefringence-like 41 (AHRD V3.3 *** A0A2I4GYL0_9ROSI) AT3G14850 Solyc12g014380.3 1786 1428 1405 1364 1013 1112 1064 1088 1359 1485 1482 1192 1447 1461 1660 glucose-6-phosphate isomerase DQ451687 AT5G42740 Solyc12g014390.3 479 575 655 640 644 609 713 656 558 416 637 589 486 547 674 50S ribosomal protein L13 (AHRD V3.3 *** A0A1U8E5A8_CAPAN) AT1G78630 Solyc12g014400.3 4046 3926 3804 3492 4025 3999 3634 3674 3865 4546 3858 4290 3762 3819 4139 Cell differentiation protein RCD1-like protein (AHRD V3.3 *** A0A2G3CUT5_CAPCH),Pfam:PF04078 AT3G20800 Solyc12g014410.2 951 1576 1430 1994 1457 1238 1187 1457 1690 1612 1310 1501 1787 1640 1494 Ribonuclease 3-like protein 2 (AHRD V3.3 *** A0A1U8G157_CAPAN) AT3G20420 Solyc12g014420.2 115 748 369 483 915 683 551 1006 579 680 628 540 115 229 585 Glucan endo-1,3-beta-glucosidase 3 (AHRD V3.3 *** A0A1J3FSS7_NOCCA) Solyc12g014430.2 211 643 499 759 547 516 576 565 1048 1223 465 1117 828 697 625 Cellulose synthase (AHRD V3.3 *** A0A200QCL6_9MAGN) Solyc12g014440.2 1055 1046 1347 1523 1237 1428 1506 1124 1197 1115 1206 1133 896 1167 1806 BNR/Asp-box repeat family protein (AHRD V3.3 *** A0A2U1NQE8_ARTAN) AT5G57700 Solyc12g014450.2 3 7 7 12 3 5 4 1 18 12 20 11 9 5 7 DUF3537 domain-containing protein (AHRD V3.3 *** A0A1Q3D045_CEPFO) AT3G20300 Solyc12g014460.2 1800 1601 2134 1854 1537 1594 1674 1427 1740 1604 1904 1915 1547 1669 2221 EH domain-containing protein 1 (AHRD V3.3 *** A0A2G3CV38_CAPCH) AT3G20290 Solyc12g014470.2 255 197 225 176 168 172 186 130 135 113 174 158 242 259 231 GrpE protein homolog (AHRD V3.3 *** A0A2G3CV39_CAPCH) AT4G26780 Solyc12g014480.2 2011 655 728 662 480 507 446 384 452 813 752 665 482 491 836 golgin family A protein (AHRD V3.3 *-* AT4G22320.2) Solyc12g014490.3 701 1027 1189 884 1193 1083 1035 991 1248 786 1149 1048 1136 1134 1502 65-kDa microtubule-associated protein 1-like (AHRD V3.3 *** Q9FEV7_TOBAC),Pfam:PF03999 AT5G55230 Solyc12g014500.3 35 61 51 76 37 48 21 54 50 61 14 78 17 49 6 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1QHF5_ARTAN) AT5G55250 Solyc12g014530.3 1059 762 446 599 695 605 683 660 480 757 305 549 426 295 283 L-aspartate oxidase (AHRD V3.3 *** A0A2G3CUJ1_CAPCH) AT5G14760 Solyc12g014540.2 4597 2637 2517 2728 1836 2310 1950 1701 1805 2429 2245 2198 2556 2576 2532 PHD finger protein (AHRD V3.3 *** A0A2G3CUI9_CAPCH) AT1G50620 Solyc12g014545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc12g014550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Syntaxin-52 (AHRD V3.3 *** A0A2G2X5Z9_CAPBA) Solyc12g014560.3 137 173 305 301 320 320 307 256 204 195 224 240 136 211 203 Cell division protein FtsZ (AHRD V3.3 *** A0A2G2WFK7_CAPBA) AT5G55280 Solyc12g014570.2 18 299 186 303 480 529 514 611 234 112 191 411 148 229 111 Glycerophosphodiester phosphodiesterase GDPDL4 (AHRD V3.3 *** A0A2G2Z5P4_CAPAN) AT5G55480 Solyc12g014580.2 0 0 2 0 0 0 0 0 2 0 3 0 0 0 0 Major pollen allergen Ole e 6 (AHRD V3.3 *** A0A2G3C3U1_CAPCH) Solyc12g014590.3 13 19 32 21 141 105 78 98 22 6 28 40 11 6 17 Pirin-like protein (AHRD V3.3 *** A0A1U8G1E0_CAPAN) AT1G50590 Solyc12g014595.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2K3JUZ2_TRIPR) Solyc12g014600.2 188 483 483 587 541 602 613 615 438 324 403 399 473 483 461 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4JFN7_ARATH) Solyc12g014610.2 3203 1767 1301 1808 1225 1104 1093 1534 1463 2208 1142 1649 1292 1377 1475 WRKY transcription factor 20 AT4G26640 Solyc12g014615.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, C2H2 (AHRD V3.3 *-* A0A2U1PE02_ARTAN) Solyc12g015630.2 88 62 18 55 67 62 56 58 32 61 8 21 63 34 13 transmembrane protein (AHRD V3.3 *** AT5G55570.1) AT5G55570 Solyc12g015640.2 515 537 385 408 490 551 546 454 288 325 269 326 446 423 413 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** A0A1P8B9X1_ARATH) AT5G55580 Solyc12g015650.3 141 94 137 91 80 89 70 126 107 90 88 86 54 88 145 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* K3XEM9_SETIT) AT3G20170 Solyc12g015660.2 239 300 298 354 296 393 355 318 269 211 278 261 297 370 112 Zinc ion binding protein (AHRD V3.3 *** S8CIZ8_9LAMI) AT1G55915 Solyc12g015680.1 582 466 695 758 620 580 511 616 603 681 756 758 552 613 510 Protein TIC 20-v, chloroplastic (AHRD V3.3 *** A0A1U8G9G7_CAPAN) AT5G55710 Solyc12g015690.3 49 455 389 236 636 450 469 476 416 457 238 346 132 206 151 fasciclin-like arabinogalactan protein 1 (AHRD V3.3 *** A0A1U8G960_CAPAN) Solyc12g015700.3 0 5 0 1 0 0 0 0 0 0 0 0 0 0 0 Nudix hydrolase 10 (AHRD V3.3 *** A0A2G3CV32_CAPCH) Solyc12g015710.2 878 632 745 846 692 751 731 602 610 553 783 759 629 775 921 16S rRNA (Cytosine967-C5)-methyltransferase (AHRD V3.3 *** A0A2I0W381_9ASPA) AT3G13180 Solyc12g015730.3 699 472 615 598 443 565 598 383 384 367 473 402 431 564 827 PPR superfamily protein (AHRD V3.3 --* AT5G55840.2) Solyc12g015740.2 104 421 586 520 652 758 773 589 339 281 529 449 493 466 429 Transmembrane emp24 domain-containing protein p24beta2 (AHRD V3.3 *** A0A2G2ZY86_CAPAN) AT3G07680 Solyc12g015750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g015760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g015770.3 420 334 232 476 258 377 305 293 662 955 837 835 145 384 470 Cellulose synthase (AHRD V3.3 *-* A0A200RAR0_9MAGN) Solyc12g015780.2 743 1233 993 842 850 826 869 845 768 597 584 928 1965 1523 919 DNA-directed RNA polymerase (AHRD V3.3 *** A0A200Q9V0_9MAGN) AT1G60620 Solyc12g015790.1 0 3 1 0 18 2 3 6 4 0 4 1 0 3 1 Eukaryotic translation initiation factor 6 (AHRD V3.3 *** A0A2G3A551_CAPAN) Solyc12g015800.2 0 36 49 34 55 17 31 19 30 32 29 8 9 23 33 RING/U-box superfamily protein (AHRD V3.3 *** Q8LES9_ARATH) AT5G55970 Solyc12g015810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transmembrane protein C9orf5 protein (AHRD V3.3 *** Q93XX1_ARATH) Solyc12g015820.1 99 138 80 175 125 97 101 105 97 111 66 98 92 108 58 SufE-like protein, chloroplastic (AHRD V3.3 *-* A0A1J3K7T9_NOCCA) Solyc12g015830.1 50 86 54 64 39 89 67 53 45 42 51 66 36 48 38 BolA protein (AHRD V3.3 *-* A0A200RAI6_9MAGN) AT1G55805 Solyc12g015840.3 101 54 41 88 52 90 85 66 27 52 46 28 36 46 73 Pleckstrin homology (PH) domain-containing protein (AHRD V3.3 *-* F4JNE4_ARATH) Solyc12g015850.1 4 41 45 57 99 42 59 43 37 19 53 47 33 47 26 Nucleotide/sugar transporter family protein (AHRD V3.3 *** A0A2K3L035_TRIPR) AT5G55950 Solyc12g015860.2 352 1755 962 1093 2057 1785 1710 2120 2166 1255 913 2043 1526 1342 697 farnesyl pyrophosphate synthase AT4G17190 Solyc12g015870.2 723 913 1100 1030 1069 1153 1185 911 941 737 928 900 929 828 789 Calcineurin B-like protein (AHRD V3.3 *** C3TRS0_MAIZE) AT5G55990 Solyc12g015880.2 9650 15633 10195 7085 13564 11853 12087 12793 8863 6980 6250 8393 23162 14353 8552 Heat shock protein 90-1 AT5G56010 Solyc12g015890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Endo-1,31,4-beta-D-glucanase (AHRD V3.3 *-* A0A1J3HRT0_NOCCA) Solyc12g015900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF868 family protein (DUF868) (AHRD V3.3 *** Q9SI11_ARATH) Solyc12g015910.1 271 323 251 626 469 431 520 416 387 385 290 379 310 343 226 SufE-like protein chloroplastic-like (AHRD V3.3 *** A0A2K3NJS0_TRIPR) AT4G26500 Solyc12g015920.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heavy metal-associated isoprenylated plant protein 47 (AHRD V3.3 *-* A0A314Z745_PRUYE) AT3G07600 Solyc12g015923.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g015927.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) Solyc12g015930.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g015970.3 682 439 596 627 621 492 569 440 599 723 661 594 595 534 521 GPI-anchored protein LORELEI (AHRD V3.3 *** A0A2I4E3L7_9ROSI) Solyc12g015980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1KQF7_ARTAN) Solyc12g015985.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase HT1 (AHRD V3.3 *-* A0A2G2Z197_CAPAN) Solyc12g016000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *-* A0A200R9A8_9MAGN) Solyc12g016010.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine protein kinase (AHRD V3.3 *-* B6T8S1_MAIZE) Solyc12g016020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1KQF7_ARTAN) Solyc12g016030.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1KQF7_ARTAN) Solyc12g016040.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1KQF7_ARTAN) Solyc12g016050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *-* A0A200R9A8_9MAGN) Solyc12g016060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1KQF7_ARTAN) Solyc12g016070.1 1 0 0 0 0 0 0 0 2 0 2 0 1 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1KQF7_ARTAN) Solyc12g016090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *-* A0A200R9A8_9MAGN) Solyc12g016100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1KQF7_ARTAN) Solyc12g016110.1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1KQF7_ARTAN) Solyc12g016120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *-* A0A2U1KQF7_ARTAN) Solyc12g016130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *-* A0A200R9A8_9MAGN) Solyc12g016140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like domain-containing protein (AHRD V3.3 *** A0A2U1KQF7_ARTAN) Solyc12g016143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g016147.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AGAMOUS-like 96 (AHRD V3.3 --* AT5G06500.1) Solyc12g016150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL80 (AHRD V3.3 *-* A0A2I0VKN9_9ASPA) Solyc12g016170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like MADS-box protein AGL80 (AHRD V3.3 *** A0A2I0VKN9_9ASPA) Solyc12g016180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like mads-box protein agl80-like (AHRD V3.3 *** A0A2K3MA14_TRIPR) Solyc12g016190.2 726 732 642 659 769 681 636 716 593 623 476 619 934 775 490 High mobility group B protein 10 (AHRD V3.3 *** A0A2G2X5K3_CAPBA) AT3G13350 Solyc12g016200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g016210.2 524 389 389 454 357 359 348 256 261 325 551 296 320 382 590 tRNA dimethylallyltransferase (AHRD V3.3 *** AT3G23255.2) AT3G23255 Solyc12g016220.3 628 504 425 640 526 504 505 547 649 583 648 400 453 655 1098 Disease resistance protein (AHRD V3.3 *-* A0A2U1P003_ARTAN) Solyc12g017230.2 440 250 247 295 201 205 206 159 286 257 214 220 248 282 303 hypothetical protein (AHRD V3.3 *** AT4G26450.2) AT4G26450 Solyc12g017240.2 242 102 737 52 3 8 13 10 34 31 1393 143 101 41 414 xyloglucan endo-transglycosylase B1 Solyc12g017250.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 photosystem II 10 kDa polypeptide, chloroplastic (AHRD V3.3 *** A0A2I4F6M0_9ROSI) Solyc12g017260.2 1372 1653 1212 1237 1640 1569 1596 1957 1572 1594 1311 1553 1618 1619 913 protein PAT1 homolog 1-like (AHRD V3.3 *** A0A2I4EXG6_9ROSI) AT1G79090 Solyc12g017263.1 35 34 16 23 29 27 36 33 38 23 14 21 30 20 24 Unknown protein Solyc12g017265.1 51 47 52 39 60 67 62 28 35 24 62 48 27 40 68 Unknown protein Solyc12g017267.1 28 7 19 39 8 31 41 15 18 18 20 9 5 7 25 Unknown protein Solyc12g017280.2 364 609 375 463 468 434 537 589 495 373 305 470 453 579 412 ARM repeat superfamily protein (AHRD V3.3 *** F4IDJ4_ARATH) AT1G79190 Solyc12g017290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60S ribosomal protein L9 (AHRD V3.3 *** A0A2G3AX04_CAPCH) Solyc12g017300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Agamous-like mads-box protein agl80-like (AHRD V3.3 *-* A0A2K3LUY1_TRIPR) Solyc12g017310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Defective in cullin neddylation protein (AHRD V3.3 *** A0A2G2VEI1_CAPBA) Solyc12g017340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Metal tolerance protein 10 (AHRD V3.3 *-* A0A2G2YIH1_CAPAN) Solyc12g017350.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cation efflux protein (AHRD V3.3 *** A0A200Q589_9MAGN) Solyc12g017360.3 124 108 197 458 239 152 163 198 77 324 180 114 58 69 121 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* F4IF51_ARATH) AT1G79480 Solyc12g017370.3 158 173 196 226 128 83 89 70 151 119 204 75 241 197 325 Myb family transcription factor APL (AHRD V3.3 *** A0A1U8G1X9_CAPAN) AT1G79430 Solyc12g017380.3 2 3 1 2 2 0 1 0 2 6 2 2 6 3 4 Organic cation/carnitine transporter 2 (AHRD V3.3 *** A0A2G3BN50_CAPCH) Solyc12g017390.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Viroid symptom modulation protein (AHRD V3.3 *** Q9M728_SOLLC) AT1G79250 Solyc12g017395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc12g017400.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAC domain-containing protein (AHRD V3.3 *-* A0A2K3MP41_TRIPR) AT1G79580 Solyc12g017410.2 968 1209 1011 1093 1443 1296 1367 1397 870 1175 832 1134 1285 1115 885 Zinc finger transcription factor 76 AT3G12680 Solyc12g017420.2 1026 892 1047 1059 997 1103 1125 1052 1121 962 997 907 733 1160 1072 ABC transporter-like (AHRD V3.3 *** A0A200R0Y3_9MAGN) AT1G54350 Solyc12g017430.3 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *-* A0A178W5R2_ARATH) Solyc12g017440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** A0A2U1N0Z9_ARTAN) Solyc12g017450.2 619 1250 948 916 1299 1221 1180 1623 1416 1069 1090 1282 956 884 838 Ubiquitin-specific protease family C19 protein (AHRD V3.3 *** A0A2K3NKS0_TRIPR) AT1G16860 Solyc12g017460.1 949 5802 3486 2761 12417 8307 9529 14434 6428 5825 6481 9133 4327 6428 1466 GDSL esterase/lipase At5g03980-like (AHRD V3.3 *** A0A1S3YRJ5_TOBAC) Solyc12g017470.2 61 85 72 100 74 124 82 124 94 92 104 79 66 73 41 3-phosphoinositide-dependent protein kinase-1 (AHRD V3.3 *** AT3G10572.1) AT3G10572 Solyc12g017475.1 6 16 34 13 5 14 14 11 6 6 21 12 9 24 24 Unknown protein Solyc12g017480.3 132 29 15 27 1 12 1 3 9 40 26 6 25 24 26 Plant intracellular Ras-group-related LRR protein (AHRD V3.3 *** A0A2R6R402_ACTCH) AT2G19330 Solyc12g017510.2 312 448 385 327 287 329 272 300 368 270 251 285 322 362 274 RAP domain (AHRD V3.3 *** A0A200Q768_9MAGN) AT2G31890 Solyc12g017520.1 5 1 3 11 16 19 7 5 12 6 7 7 6 9 0 Late embryogenesis abundant protein (AHRD V3.3 *-* A0A2K3L9G4_TRIPR) Solyc12g017530.1 649 565 479 492 96 88 48 76 464 714 515 223 122 292 311 Unknown protein Solyc12g017540.2 1396 932 1099 1048 812 979 999 755 805 893 999 943 827 877 1178 Ankyrin repeat protein SKIP35 (AHRD V3.3 *** A0A1U8ESM2_CAPAN) AT3G59910 Solyc12g017545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase (AHRD V3.3 *** A0A0B4ULM0_ORYSJ) Solyc12g017550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *-* A0A2U1M2T8_ARTAN) Solyc12g017570.2 3029 2621 1977 2020 2476 2372 2280 2834 2530 2824 1710 2590 3163 2421 1955 Guanosine nucleotide diphosphate dissociation inhibitor (AHRD V3.3 *** O22402_TOBAC) AT3G59920 Solyc12g017575.1 20 11 22 28 16 17 33 29 37 12 25 3 20 28 14 UBN2_3 domain-containing protein (AHRD V3.3 *-* A0A1Q3AR18_CEPFO) Solyc12g017610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CW-type Zinc Finger (AHRD V3.3 *-* F4IZK5_ARATH) Solyc12g017620.1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc12g017630.2 1857 1437 1399 974 1137 1199 1187 1137 985 790 920 1084 1537 1374 1228 Ribosomal RNA small subunit methyltransferase NEP1 (AHRD V3.3 *** A0A2G3BSL4_CAPCH) AT3G57000 Solyc12g017660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *-* K4BAZ4_SOLLC) Solyc12g017670.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (AHRD V3.3 *-* A0A2G2VE40_CAPBA) Solyc12g017675.2 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 Ribosomal RNA small subunit methyltransferase NEP1 (AHRD V3.3 *-* A0A2G3BSL4_CAPCH) Solyc12g017690.3 902 464 386 437 303 255 267 275 333 322 364 471 441 446 437 Queuine tRNA-ribosyltransferase accessory subunit 2 (AHRD V3.3 *** A0A328DYD0_9ASTE) Solyc12g017700.2 17 8 12 9 6 12 14 19 11 35 8 11 55 36 27 RNA helicase family protein (AHRD V3.3 *** F4IE90_ARATH) Solyc12g017705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2U1PV21_ARTAN) Solyc12g017710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *** Q8LCP0_ARATH) Solyc12g017720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mitogen-activated protein kinase kinase kinase 18-like (AHRD V3.3 *-* XP_004242223.1) Solyc12g017730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1M2V8_ARTAN) Solyc12g017740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *** Q8LCP0_ARATH) Solyc12g017760.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase-like protein (AHRD V3.3 *-* Q8LCP0_ARATH) Solyc12g017770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mitogen-activated protein kinase kinase kinase 3 (AHRD V3.3 --* M3K3A_ARATH) Solyc12g017780.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/threonine-protein kinase chk-1-like (AHRD V3.3 *-* XP_010314102.2) Solyc12g017790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 mitogen-activated protein kinase kinase kinase 2-like (AHRD V3.3 *-* A0A2I4FL67_9ROSI) Solyc12g017800.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *** A0A2U1N8H9_ARTAN) Solyc12g017810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A2U1N8H9_ARTAN) Solyc12g017820.2 2 0 4 0 0 4 1 1 0 0 0 6 0 3 0 Golgi-to-ER traffic-like protein (AHRD V3.3 *** A0A1P8BH44_ARATH) AT5G63220 Solyc12g017830.3 2538 3399 2061 2269 2733 2486 2622 3403 3201 2893 1879 2472 2922 3182 2732 Brefeldin A-inhibited guanine nucleotide-exchange protein 5 (AHRD V3.3 *** A0A2G2ZX29_CAPAN) AT3G43300 Solyc12g150106.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g017840.2 6 4 0 0 0 0 0 0 1 1 1 0 4 3 2 Protein kinase domain (AHRD V3.3 *** A0A200QZ79_9MAGN) Solyc12g017850.2 34 64 66 97 81 110 120 94 67 52 154 98 75 83 79 DUF581 domain-containing protein (AHRD V3.3 *** A0A1Q3AVJ7_CEPFO) Solyc12g017860.3 496 508 492 535 514 613 669 526 497 456 413 529 520 506 447 Helicase (AHRD V3.3 *** A0A200R9A6_9MAGN) AT2G06990 Solyc12g017870.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4DDB5_SOLLC) Solyc12g017880.3 32 70 121 79 45 40 37 18 60 94 100 31 79 74 84 Cytochrome b561 and DOMON domain-containing protein (AHRD V3.3 *** A0A2G3CV22_CAPCH) Solyc12g017883.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PttA' (AHRD V3.3 *-* O22369_PETHY) Solyc12g150107.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g017887.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g017900.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Potassium transporter (AHRD V3.3 *-* A0A2G3A576_CAPAN) Solyc12g017910.2 3205 2745 2147 2339 2365 2340 2454 2406 3049 3367 2580 2631 2458 2474 2707 Potassium transporter (AHRD V3.3 *** A0A2G3A576_CAPAN) AT3G02050 Solyc12g017920.3 435 369 413 374 302 368 307 332 307 451 449 375 280 349 323 Poly(ADP-ribose) glycohydrolase 1 (AHRD V3.3 *** A0A2G3A5A1_CAPAN) AT2G31870 Solyc12g017960.1 257 253 336 198 162 101 96 74 153 189 290 217 264 173 243 hypothetical protein (AHRD V3.3 *** AT2G44010.1) AT2G44010 Solyc12g017970.1 37 201 303 294 377 455 412 531 263 204 186 329 129 190 135 GPI-anchored adhesin-like protein (AHRD V3.3 *** AT2G43990.1) AT2G43990 Solyc12g018990.2 526 468 571 545 524 509 480 527 634 676 596 468 601 604 726 Inosine-uridine preferring nucleoside hydrolase family protein, expressed (AHRD V3.3 *** Q84MH2_ORYSJ) AT1G05620 Solyc12g019000.2 836 818 688 542 571 586 584 589 709 720 627 691 1253 1038 758 La-related protein 6B (AHRD V3.3 *** A0A2G2X5H3_CAPBA) AT2G43970 Solyc12g019010.2 388 244 342 231 234 215 214 191 207 238 295 223 193 249 316 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE (AHRD V3.3 *** A0A0A5PD05_CITFR) AT1G23360 Solyc12g019040.3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 Exostosin family protein (AHRD V3.3 *-* AT3G42180.5) Solyc12g019050.2 0 11 10 6 3 10 10 15 19 3 4 18 3 1 0 Exostosin-like (AHRD V3.3 *** A0A200Q881_9MAGN) AT3G42180 Solyc12g019055.1 36 69 24 70 66 102 77 104 44 52 50 69 23 38 7 Unknown protein Solyc12g019060.2 1190 679 604 1056 368 457 425 327 666 744 920 425 727 703 1166 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A1U8F3K5_CAPAN) AT2G31820 Solyc12g019070.1 0 1 14 7 1 5 4 6 1 1 2 13 0 2 0 Type II inositol 1,4,5-trisphosphate 5-phosphatase 14 (AHRD V3.3 *-* A0A2G3AX32_CAPCH) Solyc12g019080.3 11 8 38 13 6 20 22 18 13 12 23 29 3 8 1 type I inositol polyphosphate 5-phosphatase 12-like (AHRD V3.3 *** A0A2I4G632_9ROSI) AT2G43900 Solyc12g019090.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc12g019100.2 67 62 23 33 40 39 48 70 60 34 20 52 17 73 25 Valine--tRNA ligase (AHRD V3.3 *-* A0A2G3CUT8_CAPCH) Solyc12g019110.3 534 597 562 669 564 694 739 583 429 386 547 483 370 580 501 Valine--tRNA ligase (AHRD V3.3 *** A0A1J3DKQ5_NOCCA) AT5G16715 Solyc12g019120.2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** O80559_ARATH) AT2G43890 Solyc12g019130.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** Q9SLM8_ARATH) AT2G43880 Solyc12g019140.3 4 0 1 0 0 1 0 0 1 1 4 4 0 1 3 Pectin lyase-like superfamily protein (AHRD V3.3 *** Q9SLM8_ARATH) AT2G43880 Solyc12g019150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g019144.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B1Z6_ARATH) Solyc12g019180.2 0 8 0 4 48 42 36 87 1 5 5 35 0 5 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A1I9LP65_ARATH) AT3G59850 Solyc12g019190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PN10_ARTAN) Solyc12g019200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PN10_ARTAN) Solyc12g019220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A1I9LP65_ARATH) AT3G59850 Solyc12g019230.2 0 0 0 0 0 1 3 1 0 0 0 0 1 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A1I9LP65_ARATH) AT3G59850 Solyc12g019235.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc12g019240.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sesquiterpene synthase (AHRD V3.3 *** G8H5N2_SOLHA) Solyc12g019290.1 1160 1469 1256 1175 1120 1255 1090 1310 1220 1044 1126 1203 1512 1355 1273 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CC33_CAPCH) AT2G37230 Solyc12g019300.2 245 187 178 238 118 226 185 164 144 157 149 120 302 244 222 Acetolactate synthase small subunit chloroplastic-like (AHRD V3.3 *-* A0A2K3NNG6_TRIPR) Solyc12g019320.2 376 1943 1486 1205 2301 2302 2015 2439 2294 2919 1856 3179 1867 1943 689 Protein DETOXIFICATION (AHRD V3.3 *** A0A2U1NP73_ARTAN) Solyc12g019330.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *-* A0A218XXF5_PUNGR) Solyc12g019335.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein DETOXIFICATION (AHRD V3.3 *-* A0A200R7H3_9MAGN) Solyc12g019340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g019343.1 19 16 7 18 21 10 14 7 10 9 39 7 9 7 17 Movement protein (AHRD V3.3 --* MVP_CERV) Solyc12g019347.1 1 0 31 12 0 6 4 10 5 0 20 7 0 9 10 cytokinin dehydrogenase 3-like (AHRD V3.3 *-* XP_015384891.1) Solyc12g019410.3 132 196 291 204 156 175 195 160 244 237 316 153 218 205 194 Protein kinase domain (AHRD V3.3 *** A0A200QJI2_9MAGN) AT2G43850 Solyc12g019420.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 BTB/POZ and TAZ domain-containing protein 3 (AHRD V3.3 *** A0A1U8ET19_CAPAN) Solyc12g019430.3 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 AT hook motif DNA-binding family protein (AHRD V3.3 *-* A0A2U1PYS7_ARTAN) Solyc12g019440.3 0 2 13 8 11 11 5 6 1 17 1 7 0 9 2 Pectin acetylesterase (AHRD V3.3 *** K4DDH0_SOLLC) Solyc12g019450.1 10 16 2 4 6 2 10 1 2 5 3 1 6 2 10 Heavy metal-associated isoprenylated plant protein 26 (AHRD V3.3 --* A0A2G2ZMM7_CAPAN) Solyc12g019460.2 1642 1511 1895 1768 1942 1882 1758 1864 1834 1845 1858 1978 1973 1873 2069 mitogen-activated protein kinase 1 AT2G43790 Solyc12g019470.2 276 367 411 351 339 287 308 365 367 229 362 370 413 317 376 stress response protein (AHRD V3.3 *** AT3G59800.2) AT3G59800 Solyc12g019473.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) ATMG00240 Solyc12g019477.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tetratricopeptide-like helical domain-containing protein (AHRD V3.3 *-* A0A2U1KA88_ARTAN) Solyc12g019480.3 1754 4005 3472 3727 6595 5986 6481 7460 6007 4690 3373 6291 3850 3492 2174 Formin-like protein (AHRD V3.3 *-* A0A2G2X5C4_CAPBA) AT2G43800 Solyc12g019490.2 204 228 254 222 279 234 293 332 272 312 211 283 202 241 228 acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X2 (AHRD V3.3 *** A0A2I4GBM4_9ROSI) AT2G30720 Solyc12g019540.2 83 44 50 70 65 70 59 44 35 65 69 67 41 65 45 Unknown protein Solyc12g019550.2 195 203 164 172 623 682 741 500 276 349 483 246 52 82 147 hypothetical protein (AHRD V3.3 *-* AT1G21500.1) AT1G21500 Solyc12g019560.1 93 97 60 38 44 38 44 83 79 84 10 59 27 60 35 Serine carboxypeptidase-like 1 (AHRD V3.3 *-* A0A2G2X7L7_CAPBA) Solyc12g019570.2 637 551 643 469 553 516 465 487 527 553 557 626 569 521 634 Serine carboxypeptidase-like 18 (AHRD V3.3 *** A0A2G3A0B2_CAPAN) Solyc12g019610.3 1 0 0 0 0 3 1 1 0 0 0 1 0 0 0 Kinesin-like protein (AHRD V3.3 *-* A0A2G2W7X6_CAPBA) Solyc12g019620.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) Solyc12g019640.2 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 Pleiotropic drug resistance protein (AHRD V3.3 *-* C8CA13_CUCSA) Solyc12g019645.1 6 2 2 0 0 2 1 1 2 2 0 0 1 0 0 Unknown protein Solyc12g019680.1 0 1 4 1 7 0 2 2 1 0 0 1 0 2 0 Cytochrome P450 (AHRD V3.3 *** A0A2U1MA11_ARTAN) Solyc12g019690.2 411 333 477 488 343 326 398 274 295 351 453 391 543 410 509 small basic intrinsic protein 1.1 AT3G04090 Solyc12g019700.1 285 137 78 76 59 61 53 42 36 134 25 95 11 38 7 Unknown protein Solyc12g019710.1 2432 1465 2526 1683 1310 1461 1570 943 1170 883 1762 1259 845 1465 1809 Unknown protein Solyc12g019715.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g019740.2 3524 1303 511 781 738 721 841 588 695 1878 983 840 673 796 2192 Thioredoxin-like 1-1, chloroplastic (AHRD V3.3 *** A0A1U8F9B4_CAPAN) AT1G08570 Solyc12g019750.3 2789 2513 2160 2344 2188 2228 2415 2411 2181 2538 2177 2531 2692 2753 2510 polypyrimidine tract-binding protein homolog 3 (AHRD V3.3 *** A0A2I4DWZ5_9ROSI) Solyc12g019760.1 1 4 2 14 1 5 7 1 1 2 0 9 11 6 33 Unknown protein Solyc12g019770.1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 protein ENDOSPERM DEFECTIVE 1-like isoform X1 (AHRD V3.3 *-* A0A2I4E1G2_9ROSI) Solyc12g019790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g019795.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g019810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-RELATED transcription factor (AHRD V3.3 *-* F1DJU8_MAIZE) Solyc12g019830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcriptional activator Myb (AHRD V3.3 *-* A0A2G2VHK5_CAPBA) Solyc12g019840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-RELATED transcription factor (AHRD V3.3 *-* F1DJU8_MAIZE) Solyc12g019860.2 1929 2596 1679 1966 2708 2383 2314 3210 2559 2354 1570 2333 2569 2307 1745 CCR4-NOT transcription complex subunit 3 (AHRD V3.3 *** A0A2G3CUE6_CAPCH) AT5G18230 Solyc12g019870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *** A0A1U8E178_CAPAN) Solyc12g019880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phosphatidylinositol 4-phosphate 5-kinase (AHRD V3.3 *** K4DDL1_SOLLC) AT3G56960 Solyc12g019890.2 181 589 497 657 850 795 716 959 584 428 589 627 283 410 418 Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A1U8GB40_CAPAN) AT2G19440 Solyc12g019900.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-RELATED transcription factor (AHRD V3.3 *-* F1DJU8_MAIZE) Solyc12g019910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-RELATED transcription factor (AHRD V3.3 *-* F1DJU8_MAIZE) Solyc12g019913.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A1J3GWQ9_NOCCA) Solyc12g019917.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PNF5_TRIPR) ATMG00240 Solyc12g019920.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myosin family protein (AHRD V3.3 *-* A0A2U1N6F7_ARTAN) Solyc12g019930.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myosin-11 (AHRD V3.3 *-* A0A2G3CCD6_CAPCH) Solyc12g019940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Genome polyprotein (AHRD V3.3 *-* POLG_PVCV1) Solyc12g019945.1 1 3 0 0 0 0 0 0 0 0 2 0 0 4 2 Unknown protein Solyc12g019950.1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g019955.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 --* A0A2K3M7E6_TRIPR) Solyc12g019960.2 2302 2015 2323 2104 2019 2264 2214 2171 2197 2025 1924 1866 2018 2087 1840 Telomerase activating protein Est1 (AHRD V3.3 *** A0A1P8BBV1_ARATH) AT5G19400 Solyc12g019970.1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g019973.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc12g019977.1 195 143 175 216 148 185 178 211 177 167 86 153 120 109 122 Unknown protein Solyc12g019990.1 61 47 54 62 54 62 57 59 52 26 60 24 58 55 24 UDP-glycosyltransferase 76E1 (AHRD V3.3 *-* U76E1_SOLLC) Solyc12g020000.3 4250 2888 2495 1989 2308 2226 1981 2324 2842 2098 2326 2292 2950 2995 2300 pre-mRNA-splicing factor (AHRD V3.3 *-* AT3G56720.2) AT3G56720 Solyc12g020020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MP domain-containing protein (AHRD V3.3 *** A0A1Q3CAI9_CEPFO) Solyc12g020030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *-* A0A1Q3CEG9_CEPFO) Solyc12g020035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g020040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g020050.2 1960 2371 1757 1402 1673 1546 1353 1922 1827 1545 1364 1924 2754 2288 1463 DNA-binding protein DQ117941 AT1G80270 Solyc12g020110.2 556 564 385 426 422 450 380 583 559 516 357 605 535 507 341 SNF2_N domain-containing protein/Helicase_C domain-containing protein/HIRAN domain-containing protein/zf-C3HC4_2 domain-containing protein (AHRD V3.3 *** A0A1Q3CI53_CEPFO) AT5G05130 Solyc12g020120.2 66 60 97 103 95 86 108 85 54 76 59 83 71 81 64 Homeobox leucine-zipper protein (AHRD V3.3 *-* Q8H963_ZINVI) Solyc12g020130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *** AT5G13620.1) AT1G49290 Solyc12g021130.2 1376 949 1166 1072 965 1141 1069 953 747 1162 1214 963 868 974 1340 Reticulon-like protein (AHRD V3.3 *** A0A1U8G1W9_CAPAN) AT2G43420 Solyc12g021140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) AT3G51210 Solyc12g021150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfotransferase (AHRD V3.3 *-* A0A2G3B6Y2_CAPCH) Solyc12g021160.1 170 75 258 264 81 156 104 64 79 140 379 227 74 101 282 Unknown protein Solyc12g021170.2 500 379 294 457 343 298 357 336 383 439 397 333 449 414 404 Electron transfer flavoprotein-ubiquinone oxidoreductase (AHRD V3.3 *** A0A200QEC5_9MAGN) AT2G43400 Solyc12g021180.2 122 137 144 103 113 74 54 91 118 127 87 107 83 114 108 Dual specificity phosphatase (AHRD V3.3 *** A0A200PUY3_9MAGN) Solyc12g021190.2 499 393 341 348 370 341 321 281 347 357 430 325 359 377 513 Dual specificity phosphatase (AHRD V3.3 *** A0A200PUY3_9MAGN) Solyc12g021193.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 polycomb group RING finger protein 3-like (AHRD V3.3 *** XP_019067014.2) Solyc12g021197.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 polycomb group RING finger protein 3-like (AHRD V3.3 *-* XP_019067014.2) Solyc12g021200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *-* A0A2I0W907_9ASPA) Solyc12g021210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DREB2A-interacting protein 1 (AHRD V3.3 --* AT1G06770.1) Solyc12g021215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) Solyc12g021230.2 1243 1739 1686 1473 1472 1649 1649 1669 1123 943 1268 1398 1985 2089 1510 DNA gyrase subunit B (AHRD V3.3 *** A0A2G2X5A6_CAPBA) AT5G04130 Solyc12g021250.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Microtubule-associated protein 70 (AHRD V3.3 *-* A0A200QNX4_9MAGN) Solyc12g021260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 microtubule-associated protein 70-2-like (AHRD V3.3 --* XP_021822798.1) Solyc12g021265.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 4 (AHRD V3.3 --* A0A1J3E2E4_NOCCA) Solyc12g021280.2 454 360 290 313 339 388 438 393 339 394 234 326 339 232 288 Serine/threonine-protein kinase STN7, chloroplastic (AHRD V3.3 *** A0A1U8EJ32_CAPAN) AT1G68830 Solyc12g021310.3 779 525 357 424 355 333 383 547 504 658 141 479 377 443 323 WD repeat-containing protein 91 homolog (AHRD V3.3 *-* A0A2I4GTW6_9ROSI) Solyc12g021320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, mitochondrial (AHRD V3.3 *-* A0A2G2VM60_CAPBA) Solyc12g021323.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g021327.1 123 92 120 143 104 111 156 82 77 76 94 78 71 80 159 Unknown protein Solyc12g021330.1 132 94 111 95 103 129 98 87 68 73 54 79 63 64 135 Rhodanese-like domain-containing protein 11, chloroplastic (AHRD V3.3 *-* A0A2G3AJD1_CAPAN) Solyc12g021340.3 385 288 257 273 284 266 271 269 293 284 269 286 199 302 235 Rhodanese-like domain-containing protein 11, chloroplastic (AHRD V3.3 *** A0A2G2XPH2_CAPBA) AT4G24750 Solyc12g021360.3 527 474 572 644 688 651 696 562 553 580 625 448 563 511 679 UVR domain, ApaG domain protein (AHRD V3.3 *-* A0A2U1KA81_ARTAN) Solyc12g021363.1 0 4 7 0 2 4 1 1 2 2 3 4 2 2 1 Guanylate-binding family protein (AHRD V3.3 *-* A0A2U1PP48_ARTAN) Solyc12g021367.1 21 5 6 10 11 5 12 2 8 16 17 4 7 8 11 Unknown protein Solyc12g082700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 SPX domain-containing membrane protein (AHRD V3.3 *-* A0A1U8H343_CAPAN) Solyc12g082720.1 165 71 24 54 11 13 33 0 112 49 97 84 32 113 105 Folate-biopterin transporter 1, chloroplastic (AHRD V3.3 *-* A0A2G2VPD9_CAPBA) Solyc12g082730.3 186 92 43 53 39 34 57 0 134 59 160 108 45 129 242 Kinesin-like calmodulin-binding protein (AHRD V3.3 *-* A0A2G3A688_CAPAN) Solyc12g082750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082763.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082765.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082767.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082770.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082791.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082792.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082793.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082794.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082795.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082796.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082797.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082798.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g082799.1 9 2 6 5 0 6 3 1 5 6 12 5 5 1 11 Unknown protein Solyc12g077690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g077680.1 22 10 16 16 5 11 10 8 9 11 13 8 14 20 9 NAP1-related protein 2 (AHRD V3.3 --* A0A1U8FWN2_CAPAN) Solyc12g077670.1 25 15 5 9 2 12 7 3 10 2 6 11 11 17 15 NAP1-related protein 2-like (AHRD V3.3 --* NP_001305500.1) Solyc12g077660.3 9 11 3 4 3 1 1 0 8 2 8 5 9 12 5 NAP1-related protein 2 (AHRD V3.3 *-* A0A2G3AUT2_CAPCH) Solyc12g077630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g077620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g077623.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 villin-2-like (AHRD V3.3 *-* A0A1U8EBN1_CAPAN) Solyc12g077627.1 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 Villin-2 (AHRD V3.3 *-* A0A2G2VW72_CAPBA) Solyc12g077600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g077590.2 946 1035 1324 1166 1203 1195 1224 967 866 786 1253 935 990 988 1225 Peptidyl-tRNA hydrolase, PTH2 family (AHRD V3.3 *** A0A2I0VZH4_9ASPA) AT3G03010 Solyc12g077580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40S ribosomal protein S13 (AHRD V3.3 *-* A0A2U1KYB2_ARTAN) Solyc12g077540.3 347 261 205 236 194 140 136 196 214 250 195 203 220 251 153 Trihelix transcription factor GT-1 (AHRD V3.3 *** A0A2G3CMH9_CAPCH) AT1G13450 Solyc12g077520.1 13 8 2 11 4 4 2 4 8 6 3 0 3 8 6 trihelix transcription factor GT-1-like isoform X1 (AHRD V3.3 *-* XP_019067182.1) Solyc12g077523.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PS37_TRIPR) Solyc12g077525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0X1H4_9ASPA) Solyc12g077527.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc12g077460.2 165 61 108 103 129 118 110 72 67 89 133 104 83 83 115 Unknown protein Solyc12g077440.2 120 74 107 99 77 70 98 41 99 82 114 104 69 110 99 zinc finger (C2H2 type) family protein (AHRD V3.3 --* AT1G30970.1) Solyc12g077430.1 8 2 7 7 3 10 3 6 3 10 0 1 1 8 0 Unknown protein Solyc12g077390.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Protein kinase domain (AHRD V3.3 *** A0A200QF39_9MAGN) Solyc12g077395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc12g077380.1 50 26 26 40 22 11 13 24 15 20 23 13 28 23 25 Unknown protein Solyc12g077370.3 5 3 0 0 2 0 0 0 0 0 5 0 5 0 0 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2XM37_CAPBA) Solyc12g077360.1 3 0 0 0 0 0 2 0 0 0 0 0 0 0 11 Unknown protein Solyc12g077350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g077353.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g077355.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g077357.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g076350.2 67 99 82 66 116 78 46 128 122 132 39 76 95 124 27 Pachytene checkpoint protein 2-like protein (AHRD V3.3 *-* A0A2G2Y8I8_CAPAN) Solyc12g076340.1 16 23 12 32 17 39 49 61 38 31 5 41 37 26 41 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 --* F4JCC9_ARATH) Solyc12g076320.2 246 284 276 416 320 321 318 290 262 312 375 326 375 330 406 Pachytene checkpoint protein 2-like protein (AHRD V3.3 *-* A0A2G2Y8I8_CAPAN) Solyc12g026360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g026370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g026380.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g026400.2 5169 4676 2857 3968 4743 3455 3310 5336 3603 5414 3242 5213 3655 4010 2875 Protease Do-like 9 (AHRD V3.3 *** A0A2G2V813_CAPBA) Solyc12g026410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein phosphatase 2C family protein (AHRD V3.3 *-* A0A2U1NN53_ARTAN) Solyc12g026430.3 814 806 848 746 1083 1021 1172 1069 761 831 787 773 727 787 580 Nucleobase-ascorbate transporter 6 (AHRD V3.3 *** A0A1U8FWK5_CAPAN) Solyc12g026470.2 63 41 19 58 3 43 30 17 17 65 22 13 49 40 60 Unknown protein Solyc12g026475.1 0 0 1 0 0 1 0 3 0 3 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc12g027480.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g027490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4-coumarate--CoA ligase 2 (AHRD V3.3 *-* A0A2G2YJE4_CAPAN) Solyc12g027540.3 445 129 296 561 5 25 5 0 96 164 253 32 170 259 1091 Unknown protein Solyc12g027550.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A0K0M2C6_9ASTR) Solyc12g027560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Exportin-4 (AHRD V3.3 *-* A0A1J3DVY9_NOCCA) Solyc12g027565.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 --* A0A2G2Z378_CAPAN) Solyc12g027580.3 1365 1020 699 763 702 738 817 687 739 838 799 721 747 995 869 Exportin-4 (AHRD V3.3 *** A0A1J3GJA6_NOCCA) AT3G04490 Solyc12g027650.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Nuclear transcription factor Y subunit B-7 (AHRD V3.3 *** A0A2G3B9B5_CAPCH) AT2G13570 Solyc12g027655.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) ATMG00240 Solyc12g027690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Telomere repeat-binding protein 4 (AHRD V3.3 *-* A0A2G3C540_CAPCH) Solyc12g027700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) (AHRD V3.3 *-* A0A2U1KJQ8_ARTAN) Solyc12g027705.1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Telomere repeat-binding protein 5 (AHRD V3.3 *-* A0A2I0VXQ5_9ASPA) Solyc12g027730.2 3 10 17 27 0 1 0 0 0 14 0 21 0 5 0 Myosin-binding protein 2 (AHRD V3.3 *** A0A2G2WRI3_CAPBA) AT1G18990 Solyc12g027740.3 1599 1145 1062 957 1104 1189 1085 1064 949 1222 1184 992 1025 956 1004 serine/arginine-rich splicing factor (AHRD V3.3 *-* AT3G48120.2) AT3G48120 Solyc12g027760.1 252 113 141 145 142 93 98 63 71 163 246 82 119 112 214 Unknown protein Solyc12g027770.3 109 72 36 52 52 49 58 28 29 35 36 58 60 57 49 Rhodanese-like domain-containing protein chloroplastic-like (AHRD V3.3 *-* A0A2K3PIX2_TRIPR) Solyc12g027800.1 35 36 13 28 28 47 31 43 49 40 7 30 31 39 11 Rhodanese-like domain-containing protein 8, chloroplastic (AHRD V3.3 *** A0A2G2Y801_CAPAN) Solyc12g027805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor BIM1 (AHRD V3.3 *-* A0A2G2WR70_CAPBA) Solyc12g027810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Tryptophan/tyrosine permease (AHRD V3.3 *-* AT2G33260.2) Solyc12g027820.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* J7H400_CAPAN) Solyc12g027840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g027850.3 859 466 596 630 395 443 451 340 515 571 727 413 555 648 857 Cyclin-dependent kinase E-1 (AHRD V3.3 *-* A0A2G2ZP12_CAPAN) Solyc12g027870.1 897 579 453 446 496 355 324 545 558 792 367 592 577 498 696 Protein kinase domain (AHRD V3.3 *** A0A200Q8W1_9MAGN) AT5G63610 Solyc12g027880.3 0 0 7 0 0 0 0 1 0 0 0 0 0 0 0 Lysine histidine transporter-like 2 (AHRD V3.3 *** A0A2G2WY55_CAPBA) Solyc12g027890.1 0 1 1 0 0 0 0 2 0 0 0 0 0 0 0 Lysine histidine transporter-like 2 (AHRD V3.3 *-* A0A1U8GFP8_CAPAN) Solyc12g027893.1 25 5 5 30 6 13 12 11 8 9 12 3 5 5 9 Unknown protein Solyc12g027897.1 199 77 134 143 19 25 22 27 144 111 296 53 155 216 416 Unknown protein Solyc12g068070.2 601 327 356 338 257 345 319 238 376 321 482 290 502 479 603 Filament-like plant protein 3 (AHRD V3.3 *** A0A314LEB5_NICAT) Solyc12g068075.1 0 9 8 5 0 0 0 0 6 3 3 1 12 2 17 Glutamyl-tRNA(Gln) amidotransferase subunit A (AHRD V3.3 *-* A0A2K3P166_TRIPR) Solyc12g070090.1 6 3 0 11 2 4 0 0 2 4 0 0 6 2 4 Glutamyl-tRNA(Gln) amidotransferase subunit A (AHRD V3.3 *** A0A2K3P166_TRIPR) Solyc12g070100.2 3942 2952 2378 2302 1846 1750 1798 2099 2555 3118 2081 2290 3637 3019 2618 Mediator of RNA polymerase II transcription subunit 25 (AHRD V3.3 *** A0A2G3CLS9_CAPCH) AT1G25540 Solyc12g070110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leucine-rich repeat (LRR) family protein (AHRD V3.3 *-* Q9LT85_ARATH) Solyc12g070120.1 101 108 62 119 104 71 98 79 62 101 49 106 91 75 66 Unknown protein Solyc12g070123.1 20 22 49 17 23 13 37 24 26 9 16 10 11 13 13 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* O80850_ARATH) Solyc12g070127.1 16 12 20 42 23 28 43 36 11 13 25 12 28 19 37 Unknown protein Solyc12g070130.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Dimer_Tnp_hAT domain-containing protein (AHRD V3.3 *** A0A1Q3CIR7_CEPFO) Solyc12g070140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HAT dimerisation domain-containing protein-like (AHRD V3.3 *-* C8TFH5_ORYSI) Solyc12g070150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 enhanced ethylene response protein 5 isoform X1 (AHRD V3.3 *-* A0A2I4GPN3_9ROSI) Solyc12g070153.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g070155.1 0 0 0 3 2 1 1 2 1 0 0 3 0 0 0 Unknown protein Solyc12g070157.1 28 10 21 12 14 10 14 12 10 15 22 17 12 16 2 Unknown protein Solyc12g070156.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g070200.3 2 5 10 0 13 6 9 4 2 4 32 1 1 1 6 Unknown protein Solyc12g070210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g070270.2 269 330 251 298 414 333 365 494 448 324 259 451 192 285 219 ABC transporter B family member 26, chloroplastic (AHRD V3.3 *** A0A1U8GFH9_CAPAN) AT1G70610 Solyc12g062160.1 7 9 10 17 6 3 2 2 4 4 13 2 13 3 11 tRNA (Pseudouridine(54)-N(1))-methyltransferase (AHRD V3.3 --* A0A2R6QR64_ACTCH) Solyc12g062170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062175.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Unknown protein Solyc12g062200.1 11 28 6 16 7 7 5 6 13 13 28 14 24 6 10 Unknown protein Solyc12g062203.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQM8_TRIPR) Solyc12g062207.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc12g062210.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062220.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Nipped-B-like protein (AHRD V3.3 *** A0A2R6RYV7_ACTCH) Solyc12g150126.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *-* A0A2U1M943_ARTAN) Solyc12g062227.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 L-ascorbate oxidase-like protein (AHRD V3.3 *-* A0A2G2YAC6_CAPAN) Solyc12g062250.2 642 706 1082 1191 751 791 960 752 1116 739 1102 1019 802 1031 1305 Phosphoglucan phosphatase LSF1, chloroplastic (AHRD V3.3 *** A0A1U8GMC0_CAPAN) AT3G01510 Solyc12g062260.2 0 0 11 5 0 0 1 1 3 3 3 3 7 3 11 Phosphoglucan phosphatase LSF1, chloroplastic (AHRD V3.3 *-* A0A1U8GMC0_CAPAN) Solyc12g062270.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Mediator of RNA polymerase II transcription subunit 20 (AHRD V3.3 *-* A0A2G2YUY9_CAPAN) Solyc12g062280.2 1049 1105 1364 1223 1264 1316 1246 1109 1112 996 1093 945 1552 1302 1207 MAP kinase kinase kinase 86 Solyc12g062285.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc12g062290.2 853 1138 985 995 1041 1043 1094 1301 818 815 738 898 1164 1176 768 Protease Do-like 9 (AHRD V3.3 *** A0A2G2UZN1_CAPBA) AT5G40200 Solyc12g062340.2 4 11 24 11 20 28 5 27 4 8 4 8 9 14 20 Unknown protein Solyc12g062345.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MS94_TRIPR) Solyc12g062410.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062420.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *-* A0A097KV57_9VIRI) AT2G07732 Solyc12g062425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062443.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LOW QUALITY PROTEIN: uncharacterized protein LOC104649181 (AHRD V3.3 *-* XP_019071093.1) Solyc12g062447.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062470.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A1D0C3F1_9FABA) Solyc12g062480.3 972 626 757 866 928 858 929 921 760 812 676 840 582 767 764 Cst complex subunit ctc1 (AHRD V3.3 *** A0A314KMU1_NICAT) AT4G09680 Solyc12g062490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 enhancer of mRNA-decapping protein 4-like (AHRD V3.3 *-* A0A2I4F8S0_9ROSI) Solyc12g062510.1 0 1 0 0 0 1 0 0 0 0 0 1 0 2 0 Phospholipid-transporting ATPase (AHRD V3.3 *-* A0A1U8EJE6_CAPAN) Solyc12g062520.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 AP-2 complex subunit mu-like (AHRD V3.3 *-* A0A2I4DF52_9ROSI) Solyc12g062525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta (AHRD V3.3 *-* A0A2G2X5Q2_CAPBA) Solyc12g062540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *-* A0A2G2Z7Z2_CAPAN) Solyc12g062550.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *-* A0A0F6Y5L2_9ASTR) Solyc12g062560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribulose bisphosphate carboxylase large chain (AHRD V3.3 *-* A0A0U2U836_OENEH) Solyc12g062563.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* A0A1W6EFI3_9LILI) Solyc12g062567.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* A0A1U8QCC2_CAPAN) Solyc12g062580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* A0A1C8V6B5_9ROSI) Solyc12g062590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A2H4RG17_9LAMI) Solyc12g062600.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* PSAB_NANDO) Solyc12g062610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* PSAB_CITSI) Solyc12g062620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit c, chloroplastic (AHRD V3.3 *** A0A191T6I2_9VIRI) Solyc12g062630.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *-* A0A1U8QCC8_CAPAN) Solyc12g062640.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *** A0A2G3AIP6_CAPAN) Solyc12g062650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G2XBY8_CAPBA) Solyc12g062680.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062690.2 545 177 703 556 0 0 3 0 204 235 1276 48 148 222 861 Unknown protein Solyc12g062700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box-like/WD repeat-containing protein TBL1XR1 (AHRD V3.3 *-* A0A1U8EY19_CAPAN) Solyc12g062705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3MP29_TRIPR) ATMG00860 Solyc12g062710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *-* A0A2U1PR85_ARTAN) Solyc12g062720.3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3CFE3_CAPCH) AT1G74630 Solyc12g062730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QSE6_9MAGN) Solyc12g062733.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 --* A0A2U1LVQ4_ARTAN) AT2G07505 Solyc12g062790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine decarboxylase (AHRD V3.3 *-* A0A2G2W5V8_CAPBA) Solyc12g062800.1 0 0 5 2 2 1 0 2 5 0 16 0 2 12 10 Unknown protein Solyc12g062810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I chlorophyll a apoprotein A1 (AHRD V3.3 --* A0A2G3B2E4_CAPCH) Solyc12g062820.3 0 0 2 0 6 0 0 0 0 0 0 0 0 0 0 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A4J6_CAPAN) AT5G27110 Solyc12g062822.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062824.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrotransposon-related protein (AHRD V3.3 *-* A0A2K3M056_TRIPR) Solyc12g062826.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2K3N7D5_TRIPR) Solyc12g062828.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ty3/gypsy retrotransposon protein (AHRD V3.3 *-* A0A2U1PZV9_ARTAN) Solyc12g062840.1 0 6 0 5 0 0 0 0 2 0 0 0 1 0 0 transmembrane protein (AHRD V3.3 --* AT3G01516.2) AT5G14690 Solyc12g062850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc12g062860.2 1076 1043 1117 990 905 1048 955 1031 878 754 883 1015 1146 993 1019 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** Q9LYJ2_ARATH) AT5G14680 Solyc12g062870.2 6474 4992 4830 5109 5248 5170 5249 5471 5371 7177 5347 6453 5595 5051 4518 Shaggy-related protein kinase epsilon (AHRD V3.3 *** A0A2G3CLN0_CAPCH) AT5G14640 Solyc12g150127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin-like-specific protease ESD4 (AHRD V3.3 --* XP_021808599.1) Solyc12g062900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Elongation factor G (AHRD V3.3 *-* A0A2G3AEH8_CAPAN) Solyc12g062910.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major pollen allergen Ole e 6 (AHRD V3.3 *** A0A2G3CCI9_CAPCH) Solyc12g062930.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription elongation factor (AHRD V3.3 *-* A0A200Q6X7_9MAGN) Solyc12g062935.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g062940.3 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 Exostosin-like protein (AHRD V3.3 *** Q2HVN7_MEDTR) Solyc12g063010.3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc12g063030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g063050.3 3999 3338 3166 3201 3106 3550 3783 2857 3112 2547 3156 2611 2865 3319 3950 RNA polymerase II C-terminal domain phosphatase-like 3 (AHRD V3.3 *** A0A2G2Y7M3_CAPAN) AT2G33540 Solyc12g032920.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc12g032930.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 CBS domain containing protein (AHRD V3.3 *** B6U1W0_MAIZE) AT5G50640 Solyc12g032940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g032950.3 999 880 760 725 747 849 884 847 945 891 625 792 1041 974 988 CBS domain-containing protein, putative, expressed (AHRD V3.3 *** Q2QX49_ORYSJ) AT3G52950 Solyc12g032960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* J7H3U2_CAPAN) Solyc12g032970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A1U8QCD9_CAPAN) Solyc12g032980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A1U8QCD9_CAPAN) Solyc12g032990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UDP-glucuronosyl/UDP-glucosyltransferase (AHRD V3.3 *-* A0A2U1NU76_ARTAN) Solyc12g033000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A8W3C3_CUSEX) Solyc12g033020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A023I6R2_GLYGL) Solyc12g033040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* A0A140F951_9LAMI) Solyc12g033060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A7Y3D1_IPOPU) Solyc12g033070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 *-* Q9MUB3_SOLVI) Solyc12g033080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (AHRD V3.3 *-* A0A2P1N7K1_9LAMI) Solyc12g033100.1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g033105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g033130.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycolipid transfer domain-containing protein 1-like (AHRD V3.3 *** A0A2K3L8U6_TRIPR) AT4G39670 Solyc12g035130.2 34043 20645 17788 16845 15084 16912 13618 13122 15586 18298 16469 15346 15289 16600 17206 RNA helicase DEAD36 AT3G01540 Solyc12g035170.3 101 96 179 150 159 139 138 154 145 77 167 129 103 96 119 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QSD1_9MAGN) AT1G74580 Solyc12g035180.1 0 0 1 0 0 1 1 1 0 1 0 0 1 0 0 Unknown protein Solyc12g035190.2 162 315 300 289 440 472 447 493 443 273 324 461 248 292 167 Anthranilate phosphoribosyltransferase (AHRD V3.3 *** A0A2U1N166_ARTAN) Solyc12g035192.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc12g035194.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g035196.1 3 0 0 2 0 0 0 1 0 0 0 1 0 0 0 Unknown protein Solyc12g035198.1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 Unknown protein Solyc12g035220.1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc12g150108.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4EGG2_9ROSI) Solyc12g035240.2 3854 2461 2236 3893 2211 2248 2145 2290 1883 3649 2490 2709 2574 2660 2665 DUF1421 domain-containing protein (AHRD V3.3 *** A0A1Q3BQA9_CEPFO) AT5G14540 Solyc12g035245.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g035250.3 1488 967 952 825 685 796 707 759 865 1082 815 636 882 1093 859 Zinc finger transcription factor 77 AT3G27700 Solyc12g035260.1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 Unknown protein Solyc12g035270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g035280.1 0 0 7 0 0 0 0 0 1 0 0 0 0 0 0 Photosystem II CP47 reaction center protein (AHRD V3.3 *-* A0A2G2W5J8_CAPBA) Solyc12g035290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 asparagine-rich protein-like (AHRD V3.3 *-* XP_020397117.1) Solyc12g035300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Myb domain protein 62 (AHRD V3.3 *-* A0A2U1NV99_ARTAN) Solyc12g035310.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* A0A2U1LP30_ARTAN) Solyc12g035360.2 373 408 306 367 337 435 430 389 318 351 366 425 392 390 354 WD40 repeat (AHRD V3.3 *** A0A200RDM3_9MAGN) AT5G14530 Solyc12g035380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g035400.2 25 9 7 45 17 19 11 17 15 6 0 2 21 14 19 WAT1-related protein (AHRD V3.3 *** K4DE01_SOLLC) Solyc12g035420.3 0 1 0 0 0 0 0 0 0 2 0 1 0 2 0 Developmentally-regulated GTP-binding protein 2 (AHRD V3.3 *-* A0A2G2WPW5_CAPBA) Solyc12g035430.1 60 23 38 33 17 22 29 40 36 31 15 28 24 35 6 Alpha-N-acetylglucosaminidase (AHRD V3.3 *-* Q9ZR45_TOBAC) Solyc12g035440.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene cyclase/mutase family member (AHRD V3.3 *-* A0A2G3BN06_CAPCH) Solyc12g035450.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene cyclase/mutase family member (AHRD V3.3 *-* A0A2G3BN05_CAPCH) Solyc12g035460.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Terpene cyclase/mutase family member (AHRD V3.3 *-* A0A2G2X280_CAPBA) Solyc12g035470.2 54 65 53 64 104 91 108 63 69 40 70 63 76 72 49 Beta-1,4-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** Q9LT58_ARATH) AT3G27540 Solyc12g035490.1 78 69 51 50 63 48 32 103 65 45 17 93 85 57 26 Zn-dependent exopeptidases superfamily protein (AHRD V3.3 *-* F4HRW2_ARATH) Solyc12g035500.3 606 619 397 648 602 756 722 647 540 524 563 514 597 603 497 Zn-dependent exopeptidases superfamily protein (AHRD V3.3 *** F4HRW2_ARATH) AT1G67420 Solyc12g035510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g035520.3 781 722 600 708 639 638 720 626 798 678 643 581 719 803 881 Calmodulin-binding transcription activator 4 (AHRD V3.3 *** A0A2G2YFA1_CAPAN) AT1G67310 Solyc12g035523.1 1 0 0 0 0 0 0 0 0 0 1 0 0 2 8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc12g035525.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 (AHRD V3.3 *-* A0A2G2XQR9_CAPBA) Solyc12g035527.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VXM7_9ASPA) ATMG00810 Solyc12g035580.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A0N9DZT7_9MAGN) Solyc12g035590.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *-* A0A2H4REW6_9LAMI) Solyc12g035600.2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g035610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g035620.2 58 40 105 69 67 54 52 40 55 48 71 69 53 56 73 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *-* F4IC62_ARATH) Solyc12g035650.2 1742 2207 1335 2498 3204 1977 2341 4135 1409 3478 1741 2927 2636 2264 984 Nuclear pore complex protein NUP54 (AHRD V3.3 *** A0A1U8GNX0_CAPAN) AT1G24310 Solyc12g035670.3 1998 1780 1443 1310 1330 1319 1293 1620 1727 1678 1003 1593 1246 1626 1524 SAC3/GANP/Nin1/mts3/eIF-3 p25 (AHRD V3.3 *** A0A200QLU7_9MAGN) AT3G06290 Solyc12g035710.2 312 305 511 408 351 425 391 415 362 288 372 357 553 470 491 DUF21 domain-containing protein (AHRD V3.3 *** A0A2G2Y4P4_CAPAN) AT4G14240 Solyc12g035730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PsaB (AHRD V3.3 *-* A0A2I6PKA5_9ASPA) Solyc12g035740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* A0A1U8QCD9_CAPAN) Solyc12g035750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic (AHRD V3.3 *-* I6N960_DATST) Solyc12g035760.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A167NIB9_9SOLA) Solyc12g035770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2H4YNF7_9ASTE) Solyc12g035780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A158V2G4_9FABA) Solyc12g035790.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2H4YME4_9ERIC) Solyc12g035810.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S19 (AHRD V3.3 *** A0A060D4Y0_9GENT) ATCG00820 Solyc12g035815.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC) Solyc12g035820.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC) Solyc12g035825.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c oxidase subunit 2 (AHRD V3.3 *-* A0A2G2Z6M9_CAPAN) Solyc12g035840.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Heme exporter protein C (AHRD V3.3 *-* A0A2V4UPN7_9RHIZ) Solyc12g035845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase CF0 A subunit (chloroplast) (AHRD V3.3 --* YP_009472332.1) Solyc12g035850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit c, chloroplastic (AHRD V3.3 *** A0A1J3DKC1_NOCCA) Solyc12g035860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S11, chloroplastic (AHRD V3.3 *** G9FCH9_9LAMI) Solyc12g035870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* S8D4Z9_9LAMI) Solyc12g035880.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30S ribosomal protein S3, chloroplastic (AHRD V3.3 *-* A0A1U8QD95_CAPAN) Solyc12g035890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *-* I6N988_DATST) Solyc12g035895.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome C biogenesis Fn protein (AHRD V3.3 *-* A0A072TGA7_MEDTR) Solyc12g035910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome c biogenesis FN (AHRD V3.3 *-* A0A0C5B9X0_9SOLA) Solyc12g035940.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A2G3D100_CAPCH) Solyc12g035950.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A141SC18_9ERIC) Solyc12g035960.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* G0YEB9_SAUCE) Solyc12g035970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A172MBP1_9SOLA) Solyc12g035980.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A059Q6L0_HYONI) Solyc12g035990.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2G3BUI3_CAPCH) Solyc12g036000.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein Ycf2 (AHRD V3.3 *-* A0A2P1CPZ6_9GENT) Solyc12g036010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2G2ZTM2_CAPAN) Solyc12g036020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A223A9A1_9ROSI) Solyc12g036030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA topoisomerase 6 subunit B (AHRD V3.3 *-* A0A2G3CB60_CAPCH) Solyc12g036080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g036090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase MAK (AHRD V3.3 --* A0A2G2XMD0_CAPBA) Solyc12g150109.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycerol-3-phosphate 2-O-acyltransferase 6 (AHRD V3.3 *-* A0A2G3BFV0_CAPCH) Solyc12g036120.1 8 58 53 28 49 47 53 59 49 53 8 53 65 33 21 ABC transporter C family member 2 (AHRD V3.3 *-* A0A2G3DGG8_CAPCH) Solyc12g036130.1 26 21 12 25 25 38 24 35 37 39 6 30 67 23 22 ABC transporter C family member 2 (AHRD V3.3 *-* A0A2G3DGG8_CAPCH) Solyc12g036150.1 72 107 35 106 71 83 95 63 69 119 29 59 94 54 61 ABC transporter C family member 2 (AHRD V3.3 *-* A0A2G2WC67_CAPBA) Solyc12g036160.3 101 98 143 156 75 179 145 90 106 106 158 98 183 160 163 ABC transporter C family member 2 (AHRD V3.3 *-* A0A2G3DGG8_CAPCH) Solyc12g036170.2 50 146 233 161 206 188 215 158 179 108 298 178 107 154 275 Photosynthetic NDH subcomplex B 4 (AHRD V3.3 *** A0A0F7GXZ5_9ROSI) AT1G18730 Solyc12g036200.2 1068 1204 1556 1291 1579 1304 1277 1163 1507 1119 1654 1153 1645 1481 1646 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A1U8EWD8_CAPAN),Pfam:PF13616 AT1G26550 Solyc12g036220.3 1059 710 869 795 529 576 549 446 727 861 909 673 748 797 894 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1N8M2_ARTAN) AT1G74390 Solyc12g036230.3 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 histidine-containing phosphotransfer protein 2-like (AHRD V3.3 *** A0A2I4EDI1_9ROSI) Solyc12g036250.2 216 273 495 310 548 455 559 431 368 271 499 319 428 308 408 HNH endonuclease (AHRD V3.3 *** A0A200QEB2_9MAGN) AT1G18680 Solyc12g036260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 cation/H(+) antiporter 3-like (AHRD V3.3 *** A0A2I4FHA2_9ROSI) AT3G44920 Solyc12g036263.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein SENSITIVITY TO RED LIGHT REDUCED 1 (AHRD V3.3 *** A0A1U8FAA0_CAPAN) Solyc12g036267.1 22 10 66 31 12 14 7 4 51 3 56 66 1 55 5 Unknown protein Solyc12g036280.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g036283.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Unknown protein Solyc12g036287.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g036300.3 176 146 211 172 146 211 216 187 130 109 112 159 186 194 170 Myosin heavy chain-like protein (AHRD V3.3 *** A0A2K3PHF1_TRIPR) AT5G61200 Solyc12g036310.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g036320.3 7 4 2 7 5 9 9 6 5 2 1 4 13 11 8 Receptor-like protein kinase (AHRD V3.3 *** A0A2K3NF63_TRIPR) Solyc12g036330.1 86 62 112 56 47 58 79 42 38 116 98 37 215 68 50 Pkinase domain-containing protein/WAK_assoc domain-containing protein (AHRD V3.3 *** A0A1Q3CWJ7_CEPFO) AT1G18390 Solyc12g036340.1 190 98 77 63 37 27 68 59 65 113 98 107 70 84 95 Unknown protein Solyc12g036350.1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g036380.1 12 8 11 7 4 8 1 6 5 14 26 2 14 30 48 Unknown protein Solyc12g036390.2 38 26 39 18 1 5 4 1 6 17 76 0 109 61 12 Calmodulin binding protein-like (AHRD V3.3 *** A0A200Q136_9MAGN) AT1G73805 Solyc12g036400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Core-2 i-branching beta-n-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A2K3MN76_TRIPR) AT1G68390 Solyc12g036410.3 619 774 585 540 658 686 659 749 677 546 471 636 698 717 616 Elongation factor (AHRD V3.3 *** A0A200R8C0_9MAGN) AT5G10630 Solyc12g036430.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 transcription factor bHLH95-like (AHRD V3.3 *-* A0A2I4FIQ6_9ROSI) Solyc12g036440.1 11 79 61 90 90 47 43 96 86 41 68 72 74 62 40 membrane-associated kinase regulator (AHRD V3.3 *** AT1G67050.1) Solyc12g036445.1 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 Unknown protein Solyc12g036450.3 181 174 174 218 142 147 172 121 87 100 191 94 130 133 222 40S ribosomal protein S7 (AHRD V3.3 *-* A0A2G3D0S9_CAPCH) Solyc12g036455.1 42 34 28 33 20 29 26 24 28 17 45 31 34 27 30 40S ribosomal protein S7 (AHRD V3.3 *-* A0A2G2ZCA6_CAPAN) Solyc12g036470.2 75 92 73 142 18 9 7 11 234 390 343 53 76 25 248 bHLH transcription factor 071 AT1G18400 Solyc12g036475.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc12g036480.2 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 NAC domain (AHRD V3.3 *** A0A200Q3F5_9MAGN) AT3G18400 Solyc12g036483.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g036485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) Solyc12g036487.1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 Unknown protein Solyc12g036490.3 12 10 32 11 3 0 2 0 6 9 35 8 9 33 32 Phospholipase A1-II 1 (AHRD V3.3 *** A0A2G3D5M3_CAPCH) Solyc12g036500.2 368 338 388 297 422 379 426 319 473 307 463 267 438 332 353 DUF1666 domain-containing protein (AHRD V3.3 *** A0A1Q3CZB6_CEPFO) AT1G73850 Solyc12g036510.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q94AL3_ARATH),Pfam:PF13561 Solyc12g036520.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Fatty acid desaturase (AHRD V3.3 *-* A0A200QRI1_9MAGN) Solyc12g036530.1 1 2 0 6 5 2 2 1 9 9 5 0 10 9 5 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2U1MY66_ARTAN) Solyc12g036550.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein TIC 214 (AHRD V3.3 *-* K4EQH9_DATST) Solyc12g036560.2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Glutathione S-transferase (AHRD V3.3 *** C0LF68_CAPAN) Solyc12g036570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g036590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 7 (AHRD V3.3 *-* A0A290WKY4_SOLLC) Solyc12g036600.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NADH dehydrogenase subunit 7 (AHRD V3.3 *-* A0A060D4V8_9GENT) Solyc12g036640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *-* A0A2G3ATD1_CAPCH) Solyc12g036650.2 147 127 396 139 159 168 142 91 118 130 368 93 114 71 227 hypothetical protein (AHRD V3.3 *** AT3G02555.2) Solyc12g150110.1 10 18 25 20 27 34 36 28 14 8 42 14 25 15 10 Tubulin beta chain (AHRD V3.3 *-* A0A1U8EHY4_CAPAN) Solyc12g150111.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc12g036670.1 0 2 0 0 0 1 0 0 1 1 0 2 0 0 0 Dicarboxylate transporter 2.1, chloroplastic (AHRD V3.3 *-* A0A2G3AWL4_CAPCH) Solyc12g036673.2 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* F4JW89_ARATH) Solyc12g036710.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ribosomal protein S12 (chloroplast) (AHRD V3.3 *-* YP_009184034.1) Solyc12g036715.1 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g036740.1 37 21 10 30 1 0 11 1 30 52 29 54 19 27 33 Unknown protein Solyc12g036790.2 1017 1735 1971 1988 2085 2199 2425 2030 1484 1310 1594 1553 2105 1817 1546 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B (AHRD V3.3 *** A0A2G3D198_CAPCH) AT1G49140 Solyc12g036800.1 74 19 36 82 0 0 2 0 5 22 5 0 43 98 131 Receptor like protein (AHRD V3.3 *-* A2V882_TOBAC) Solyc12g036810.3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Kinesin-like protein (AHRD V3.3 *** S8DSZ5_9LAMI) Solyc12g036820.2 1 16 27 1 3 5 6 6 1 8 2 7 3 2 0 Unknown protein Solyc12g036825.1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 kinesin-like protein KIN-14P (AHRD V3.3 *-* XP_019066823.1) Solyc12g036850.2 314 279 188 279 303 326 339 246 141 181 256 169 234 250 177 Unknown protein Solyc12g036860.3 0 1 0 1 0 0 1 4 7 0 0 0 9 3 4 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3B4E3_CEPFO) Solyc12g036870.3 1 0 0 1 0 9 7 0 2 3 0 0 4 0 0 Myb/SANT-like DNA-binding domain protein (AHRD V3.3 *** Q8GYR6_ARATH) Solyc12g036900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 hypothetical protein (AHRD V3.3 *-* AT1G13360.3) Solyc12g036910.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g150112.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc12g036920.1 24 17 26 11 4 20 12 14 17 18 11 13 10 13 24 Unknown protein Solyc12g036930.1 4 0 4 7 8 7 8 16 4 5 0 16 7 8 1 Unknown protein Solyc12g150113.1 64 240 218 193 338 258 380 253 264 175 368 216 181 200 231 hypothetical protein (AHRD V3.3 *-* AT1G68585.1) AT1G68585 Solyc12g037950.2 6 8 6 2 0 0 1 1 3 7 1 8 10 2 6 protein PLANT CADMIUM RESISTANCE 2-like (AHRD V3.3 *** A0A1U8N9B3_GOSHI) AT1G68630 Solyc12g037960.1 1 1 0 0 1 1 0 0 0 0 6 0 0 4 0 Unknown protein Solyc12g037970.2 966 807 723 785 784 619 565 570 547 874 814 763 708 821 720 Peptidyl-tRNA hydrolase (AHRD V3.3 *** A0A200Q3I5_9MAGN) AT1G18440 Solyc12g037980.2 1923 2112 2154 1812 2188 2219 2211 2286 1824 1828 1539 1798 2388 1964 1779 actin-related protein 4-like (AHRD V3.3 *** A0A2I4G8E9_9ROSI) AT1G18450 Solyc12g037990.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Calpain-type cysteine protease DEK1 (AHRD V3.3 *-* A0A2G2V8F1_CAPBA) Solyc12g038010.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase-like 4 (AHRD V3.3 *-* A0A1U8HK02_CAPAN) Solyc12g038015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N056_TRIPR) Solyc12g038020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase-like protein (AHRD V3.3 *-* W7U8L5_9STRA) Solyc12g038030.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** S8D6T4_9LAMI) Solyc12g038070.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase-like protein (AHRD V3.3 *-* W7U8L5_9STRA) Solyc12g038080.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Photosystem II CP43 reaction center protein (AHRD V3.3 *-* A0A220NAN4_9BRAS) Solyc12g038090.1 348 258 260 321 313 247 252 276 153 304 193 247 315 251 172 Unknown protein Solyc12g038100.1 0 0 1 2 3 1 0 0 1 0 0 0 0 0 2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PGB0_TRIPR) Solyc12g038110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** S8D6T4_9LAMI) Solyc12g038120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase-like 4 (AHRD V3.3 *-* A0A2G2WGD2_CAPBA) Solyc12g038125.1 46 14 11 13 34 29 16 22 10 14 8 12 30 7 5 Potassium channel KAT1 (AHRD V3.3 *-* A0A2G3BRN2_CAPCH) Solyc12g038130.1 7 8 2 12 0 1 5 0 4 1 0 1 4 4 2 hypothetical protein (AHRD V3.3 *** AT5G13620.1) AT1G49290 Solyc12g038140.1 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 hypothetical protein (AHRD V3.3 *-* AT5G13620.1) Solyc12g150114.1 77 48 58 60 63 98 89 61 49 24 55 13 28 26 46 Potassium channel KAT1 (AHRD V3.3 *-* A0A2G3BRN2_CAPCH) Solyc12g038150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *-* S8D6T4_9LAMI) Solyc12g038160.2 967 742 663 764 525 657 589 513 773 649 681 723 703 841 1361 Lipase (AHRD V3.3 *** A0A2K3PIZ1_TRIPR) AT1G73920 Solyc12g038170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *-* Q8VWM5_SOLLC) Solyc12g038180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *-* Q8VWM5_SOLLC) Solyc12g038190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Coatomer subunit gamma (AHRD V3.3 *-* A0A2G3BVT4_CAPCH) AT2G05642 Solyc12g038220.3 1 0 0 0 1 0 1 0 0 1 1 1 0 0 0 Protein zinc induced facilitator-like 1-like (AHRD V3.3 *-* A0A2K3MT72_TRIPR) Solyc12g038225.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histidine--tRNA ligase, chloroplastic/mitochondrial (AHRD V3.3 *-* XP_004235763.1) Solyc12g038230.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038240.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT5G09530.1) Solyc12g038250.3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT5G09530.1) Solyc12g038340.2 823 693 564 659 641 599 573 642 711 688 497 627 618 638 609 translation initiation factor eIF-2B subunit delta-like (AHRD V3.3 *** A0A2I4GSP7_9ROSI) Solyc12g038343.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038347.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038370.2 311 454 402 248 301 323 260 370 277 232 258 314 612 533 281 Single-stranded DNA-binding protein (AHRD V3.3 *** B6U5B2_MAIZE) AT3G18580 Solyc12g038390.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 nuclear factor Y%2C subunit B13 (AHRD V3.3 *** AT5G23090.5) Solyc12g038400.2 903 1151 830 983 1517 1457 1397 1725 1501 1276 908 1307 1023 1136 1053 Acetyl-coenzyme A synthetase (AHRD V3.3 *** A4W5I5_ENT38) AT5G23050 Solyc12g038410.2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Tetraspanin (AHRD V3.3 *** A0A200Q8V3_9MAGN) Solyc12g038420.2 60 43 45 47 30 40 46 33 40 31 8 47 48 30 27 Unknown protein Solyc12g038425.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038430.3 1238 889 748 738 791 682 664 653 870 618 578 824 950 947 933 Transposase, Ptta/En/Spm, plant (AHRD V3.3 *-* A0A1R3I9M9_9ROSI) Solyc12g038440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A1U8FV94_CAPAN) Solyc12g038450.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2WLG1_CAPBA) Solyc12g038453.1 79 26 33 46 15 29 15 15 27 37 36 27 25 24 50 Unknown protein Solyc12g038457.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 8 NAC domain (AHRD V3.3 *** A0A200QIU5_9MAGN) Solyc12g038490.2 2296 1848 1675 1850 1866 2077 2231 2238 2029 2036 1429 1980 1483 1958 1492 Dentin sialophosphoprotein-like protein (AHRD V3.3 *-* Q9SD86_ARATH) AT5G07980 Solyc12g038510.2 776 297 850 598 371 411 261 327 201 528 193 592 62 342 227 jointless-2 AT2G03710 Solyc12g038520.3 1112 697 787 769 1183 1136 1051 1099 705 919 600 968 790 661 475 Squamosa promoter binding protein 6c AT1G69170 Solyc12g038523.1 59 47 40 51 41 46 40 71 69 92 21 53 62 45 19 Cleavage stimulation factor subunit 50 (AHRD V3.3 *** A0A2G2VGU7_CAPBA) Solyc12g038527.1 97 89 27 74 80 37 55 56 67 62 63 57 122 62 42 Katanin p80 WD40 repeat-containing subunit B1 homolog (AHRD V3.3 *-* A0A078HCY4_BRANA) Solyc12g038550.1 307 237 346 346 276 347 377 257 231 271 287 207 238 279 300 Cleavage stimulation factor subunit 50 (AHRD V3.3 *-* A0A1J3GKR0_NOCCA) Solyc12g038553.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038557.1 75 68 41 54 50 54 72 61 62 72 38 46 36 61 5 Unknown protein Solyc12g038570.3 301 184 223 266 175 179 180 138 165 180 193 235 131 239 200 AP180 N-terminal homology (ANTH) domain-containing protein (AHRD V3.3 *-* A0A2U1NPK7_ARTAN) Solyc12g038580.2 214 186 245 205 149 200 256 132 151 110 209 143 143 219 267 Trehalose-phosphatase/synthase 7 (AHRD V3.3 *-* A0A2U1PMZ4_ARTAN) Solyc12g038590.2 211 299 147 177 222 232 200 313 226 239 149 246 331 391 142 Rhomboid domain-containing protein (AHRD V3.3 *** A0A1Q3C4Y6_CEPFO) AT1G18600 Solyc12g038600.2 494 607 698 707 645 725 804 460 395 454 664 520 577 770 736 Rhomboid family protein (AHRD V3.3 *-* S8C873_9LAMI) Solyc12g038630.2 625 802 563 649 662 560 659 677 766 682 551 480 1149 865 656 BSD domain-containing protein (AHRD V3.3 *** A0A2U1LI52_ARTAN) AT1G69030 Solyc12g038640.1 4 8 0 3 5 2 3 1 2 1 2 1 1 5 6 Unknown protein Solyc12g038650.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 Unknown protein Solyc12g038660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038670.2 575 751 914 943 985 1169 1149 1034 1005 740 1172 978 604 942 844 O-fucosyltransferase (AHRD V3.3 *** A0A2P5EBU6_TREOI) AT5G15740 Solyc12g038680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *-* Q9FIY8_ARATH) Solyc12g038690.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ethylene receptor (AHRD V3.3 *-* A0A2G3CIN0_CAPCH) Solyc12g038700.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 extensin-2-like (AHRD V3.3 *-* A0A1U8EYQ2_CAPAN) Solyc12g038710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038720.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038730.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycerate dehydrogenase HPR, peroxisomal (AHRD V3.3 *-* A0A2G2WJW2_CAPBA) Solyc12g038750.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AT-rich interactive domain-containing protein 5 (AHRD V3.3 *-* A0A2G2X1F4_CAPBA) Solyc12g038800.1 30 7 22 40 0 0 0 3 1 7 34 11 3 15 99 Unknown protein Solyc12g038810.3 12 3 10 9 0 9 2 6 11 5 6 10 1 5 14 Serine/threonine-protein kinase HT1 (AHRD V3.3 *-* A0A1J3DX78_NOCCA) Solyc12g038820.1 164 187 203 133 149 186 152 125 127 204 169 163 245 206 244 HAD-superfamily hydrolase (AHRD V3.3 *** A0A200QA04_9MAGN) AT5G10460 Solyc12g038840.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein kinase HT1 (AHRD V3.3 *-* A0A2G2Y4H9_CAPAN) Solyc12g038860.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 extensin-2-like (AHRD V3.3 *-* A0A1U8EYQ2_CAPAN) Solyc12g038870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g038875.1 0 0 8 0 0 0 0 0 3 0 0 0 0 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc12g038890.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NB-LRR tospovirus immune receptor (AHRD V3.3 *-* A0A221IWU8_SOLHA) Solyc12g038900.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NB-LRR tospovirus immune receptor (AHRD V3.3 *-* A0A221IWV2_SOLPN) AT4G19060 Solyc12g038910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NB-LRR tospovirus immune receptor (AHRD V3.3 *-* A0A221IWV4_9SOLN) Solyc12g038920.2 878 1248 1645 1652 1545 1329 1593 1266 1918 1640 1989 1537 1404 1243 1748 Protein kinase domain (AHRD V3.3 *** A0A200QQM3_9MAGN) Solyc12g038950.3 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 40S ribosomal protein S15 (AHRD V3.3 *-* A0A2G2Z9S5_CAPAN) Solyc12g038960.1 0 3 0 0 3 1 0 0 0 0 0 0 1 0 0 Unknown protein Solyc12g038970.3 588 818 762 716 1041 1033 1033 1017 793 703 675 867 765 814 634 Agmatine deiminase (AHRD V3.3 *** A0A1U8EXZ9_CAPAN) AT5G08170 Solyc12g038980.2 1614 2485 2922 2554 2436 2480 2677 2235 1483 1094 2155 2186 3966 3191 2983 H/ACA ribonucleoprotein complex subunit 2-like protein (AHRD V3.3 *** A0A2G3A1U0_CAPAN) AT5G08180 Solyc12g038985.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC) Solyc12g039030.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Photosystem II protein D1 (AHRD V3.3 *-* A0A2G3DH29_CAPCH) Solyc12g039040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF810 domain-containing protein (AHRD V3.3 *-* A0A1Q3BC95_CEPFO),Pfam:PF05664 Solyc12g150115.1 0 2 0 0 3 4 1 0 0 1 0 0 2 1 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3CXR1_CEPFO) Solyc12g039050.3 5 2 0 2 2 3 1 0 6 0 7 1 0 0 5 Myb/SANT-like domain-containing protein (AHRD V3.3 *-* A0A2U1MTD8_ARTAN) Solyc12g039060.1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Methyl-CpG-binding domain-containing protein 11 (AHRD V3.3 *-* A0A2G2VPU3_CAPBA),Pfam:PF18052 Solyc12g039070.2 322 610 295 222 139 171 139 220 402 492 398 151 805 603 265 Strictosidine synthase family protein (AHRD V3.3 *** D7LVM7_ARALL) AT1G74000 Solyc12g039080.3 626 424 557 882 713 801 862 513 430 400 746 449 241 429 716 Leucine-rich repeat protein kinase family protein (AHRD V3.3 *-* A0A2U1Q5J5_ARTAN) Solyc12g039100.2 73 77 59 92 103 117 88 70 98 61 64 72 26 76 55 ACT domain-containing protein (AHRD V3.3 *-* A0A2U1M8F3_ARTAN) Solyc12g039110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PGB0_TRIPR) Solyc12g039120.2 1420 3163 3297 2286 3423 3639 3525 2943 2024 1618 2519 2514 3282 2771 2931 40S ribosomal protein S19 (AHRD V3.3 *** A0A1U8G3N2_CAPAN) AT5G61170 Solyc12g039130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g039140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g039160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger MYM-type-like protein (AHRD V3.3 *-* Q9SZ82_ARATH) Solyc12g039170.1 17 0 7 15 23 6 4 0 1 7 9 9 3 11 7 Unknown protein Solyc12g039180.2 825 710 851 737 640 673 770 624 677 599 610 553 804 981 1070 Diacylglycerol kinase (AHRD V3.3 *** A0A1U8G5K6_CAPAN) AT5G07920 Solyc12g039185.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g039200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Aminotransferase-like, plant mobile domain-containing protein (AHRD V3.3 *-* A0A124SHR6_CYNCS) AT1G50760 Solyc12g039205.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PNF5_TRIPR) ATMG00240 Solyc12g040210.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 36 (AHRD V3.3 *-* A0A2G3CJC2_CAPCH) Solyc12g040230.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger transcription factor 78 Solyc12g040240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 36 (AHRD V3.3 *-* A0A2G3CJC2_CAPCH) Solyc12g040250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 36 (AHRD V3.3 *-* A0A2G3CJC2_CAPCH) Solyc12g040255.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ribonuclease H (AHRD V3.3 *** A0A2K3K6B9_TRIPR) Solyc12g040270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 36 (AHRD V3.3 *-* A0A2G3CJC2_CAPCH) Solyc12g040280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 36 (AHRD V3.3 *-* A0A2G3CJC2_CAPCH) Solyc12g040285.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Reverse transcriptase (AHRD V3.3 *-* Q8W452_BRANA) Solyc12g040300.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger transcription factor 79 Solyc12g040310.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pre-mRNA-splicing factor SYF1 (AHRD V3.3 *-* A0A1U8G7X9_CAPAN) Solyc12g040320.2 90 103 142 138 142 124 194 111 88 86 139 116 120 109 136 Plant intracellular Ras-group-related LRR protein (AHRD V3.3 *** A0A2R6PRR8_ACTCH) AT5G07910 Solyc12g040340.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger CCCH domain-containing protein 38 (AHRD V3.3 *-* A0A2G3BD55_CAPCH) Solyc12g040360.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RING/U-box superfamily protein (AHRD V3.3 --* AT1G73760.1) Solyc12g040365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase (AHRD V3.3 *** Q8LES3_ARATH) Solyc12g040370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Receptor-like protein kinase (AHRD V3.3 *-* D3G6F0_CAPAN) Solyc12g040390.3 358 202 217 213 239 254 226 262 200 331 298 346 243 216 165 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NS63_ARTAN) Solyc12g040395.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein kinase family protein (AHRD V3.3 *** X5I191_IPONI) Solyc12g040400.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g040450.2 16 1 3 16 18 8 1 3 7 9 0 6 4 3 2 FBD-associated F-box protein At5g38590-like (AHRD V3.3 --* XP_020426490.1) Solyc12g040460.2 579 610 569 732 594 526 403 465 592 688 435 553 769 429 353 transmembrane protein%2C putative (Protein of unknown function%2C DUF599) (AHRD V3.3 *** AT3G18215.1) AT3G18215 Solyc12g040470.2 1 11 9 15 0 0 0 0 8 3 39 0 6 5 24 Unknown protein Solyc12g040480.2 100 128 156 138 134 136 148 119 135 90 158 160 150 166 207 Peroxin-3 (AHRD V3.3 *-* A0A2U1LRY0_ARTAN) Solyc12g040490.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g040500.2 138 154 143 119 165 141 132 165 161 119 101 146 154 176 124 Peroxisome biogenesis protein 3-2 (AHRD V3.3 *** A0A2G3A352_CAPAN) Solyc12g040510.2 848 1267 793 892 1130 1006 948 1118 747 838 651 835 1214 947 770 Guanine nucleotide-binding protein subunit beta-like protein (AHRD V3.3 *** A0A1U8FJH9_CAPAN) AT1G18080 Solyc12g040520.2 52 40 20 14 19 12 45 2 43 22 54 59 34 41 63 Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *-* A0A328D796_9ASTE) Solyc12g040530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g040535.1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 Unknown protein Solyc12g040570.1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 6-phosphogluconate dehydrogenase, decarboxylating (AHRD V3.3 *-* A0A1U8F1N4_CAPAN) Solyc12g040575.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc12g040620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g040640.2 17 42 160 191 84 34 31 8 18 72 133 29 6 18 196 Beta-glucosidase (AHRD V3.3 *** B6TW65_MAIZE) AT3G18080 Solyc12g040642.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3N4Z1_TRIPR) ATMG00240 Solyc12g040644.1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3FZ10_COCAP) Solyc12g040646.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transposase, MuDR, plant (AHRD V3.3 *-* A0A1R3INL5_COCAP) Solyc12g040648.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *** A0A2U1LVQ4_ARTAN) Solyc12g040680.2 1512 1712 2577 1836 2036 2073 2061 2007 1846 2044 2083 1673 2136 1811 1752 mitogen-activated protein kinase 16 AT3G18040 Solyc12g040690.1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 Unknown protein Solyc12g040700.1 7 10 0 19 0 8 3 3 12 3 0 0 2 6 3 Sucrose synthase (AHRD V3.3 *-* M1B219_SOLTU) Solyc12g040710.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FBD-associated F-box protein (AHRD V3.3 *-* A0A1J3GFP9_NOCCA) Solyc12g040740.3 5 7 0 4 1 3 5 0 2 4 8 17 14 18 1 receptor-like protein 12 (AHRD V3.3 *** A0A1S3ZVQ5_TOBAC) Solyc12g040750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8ETX1_CAPAN) AT2G33030 Solyc12g040755.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VNR7_9ASPA) ATMG00810 Solyc12g040780.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G2XTE3_CAPAN) Solyc12g040790.2 218 3350 1565 1953 4849 5628 6363 4982 5285 1418 2060 6450 2002 1848 1036 Phosphoethanolamine N-methyltransferase (AHRD V3.3 *** A0A2G3A318_CAPAN) AT1G48600 Solyc12g040800.2 178 135 151 130 51 62 43 30 86 337 96 98 362 179 243 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A2U1LMA8_ARTAN) AT3G17980 Solyc12g040810.2 1088 863 936 908 866 850 877 845 742 926 782 770 797 828 922 Geranylgeranyl transferase type-2 subunit beta (AHRD V3.3 *** A0A2G2WQD8_CAPBA) AT5G12210 Solyc12g040813.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3EXQ7_NOCCA) Solyc12g040815.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bifunctional nitrilase/nitrile hydratase NIT4B (AHRD V3.3 *-* A0A2G2VPR2_CAPBA) Solyc12g040817.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VA19_9ASPA) Solyc12g040860.2 0 125 36 42 101 108 127 117 88 18 36 122 35 38 66 glucan endo-1,3-beta-glucosidase 12-like (AHRD V3.3 *** A0A2I4GWJ6_9ROSI) Solyc12g040870.3 1 10 0 2 3 0 1 5 3 0 5 1 5 12 35 Nudix hydrolase 17, mitochondrial (AHRD V3.3 *** A0A2G3B3C9_CAPCH) Solyc12g040875.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0VJ33_9ASPA) ATMG00810 Solyc12g041870.3 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 Glutamine synthetase (AHRD V3.3 *** O04999_MEDTR) Solyc12g041880.2 448 555 639 698 761 726 856 628 649 410 655 529 458 603 703 hypothetical protein (AHRD V3.3 *** AT1G28100.6) AT1G28100 Solyc12g041890.2 3 69 155 129 246 241 218 258 113 58 99 216 28 101 17 Non-structural maintenance of chromosomes element 4-like protein B (AHRD V3.3 *** A0A2G3DE98_CAPCH) Solyc12g041895.1 0 0 0 0 0 0 0 0 2 0 0 4 0 1 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc12g041930.1 19 11 53 10 8 11 20 9 14 14 22 8 13 11 33 Transposase (AHRD V3.3 *-* F8UTT6_SOLDE) Solyc12g041940.1 3 1 0 4 0 2 0 0 6 1 0 0 1 0 14 O-methyltransferase, putative (AHRD V3.3 *** B9RVQ8_RICCO) Solyc12g041950.3 0 3 0 5 0 2 1 0 1 1 0 0 4 0 15 O-methyltransferase (AHRD V3.3 *-* G4XGX0_VITVI) Solyc12g041960.2 0 0 0 0 1 13 7 3 0 0 0 0 0 0 0 O-methyltransferase (AHRD V3.3 *** A0A1B4Z3W3_9ROSA) Solyc12g041980.3 192 149 198 167 206 233 249 209 215 208 338 192 141 213 249 Breast cancer associated RING 1 (AHRD V3.3 *-* A0A178W540_ARATH) Solyc12g042000.3 61 20 27 39 31 38 36 53 47 54 28 50 27 25 28 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein (AHRD V3.3 *-* A0A1J3IED2_NOCCA) Solyc12g042005.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2G3D5C8_CAPCH) Solyc12g042010.1 32 9 13 60 0 0 0 0 21 39 18 5 43 24 205 transcription factor IBH1-like (AHRD V3.3 *** A0A2I4G0N0_9ROSI) AT2G43060 Solyc12g042015.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MADS-box transcription factor (AHRD V3.3 *** A0A2K3MRY7_TRIPR) Solyc12g042020.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1M6C8_ARTAN) Solyc12g042030.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1L2L8_ARTAN) Solyc12g042035.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 --* AT1G03400.2) Solyc12g042055.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1-aminocyclopropane-1-carboxylate oxidase-like protein (AHRD V3.3 *-* A0A2G2ZUW2_CAPAN) Solyc12g042060.3 12190 8463 6132 5453 5273 5236 4996 6159 9002 7121 5608 6753 5834 7011 7878 ATP-dependent Clp protease ATP-binding subunit ClpC (AHRD V3.3 *** A0A327YAA3_9BACI) AT5G50920 Solyc12g042070.3 4856 3608 3800 4397 3907 4259 4550 3632 3877 4036 4074 3985 3061 4356 6046 Auxin Response Factor 2B AT5G62000 Solyc12g042080.2 7345 6925 6081 4398 4509 4753 4138 4075 3986 4394 4493 4053 7316 5943 6509 40S ribosomal protein S11 (AHRD V3.3 *** A0A2G2YII0_CAPAN) AT4G30800 Solyc12g042090.1 47 16 12 25 0 2 2 0 22 10 5 9 22 12 10 Unknown protein Solyc12g042110.3 369 209 192 301 66 62 60 58 138 107 211 124 92 114 263 replication protein A 70 kDa DNA-binding subunit B-like isoform X1 (AHRD V3.3 *-* XP_025886291.1) Solyc12g042120.3 138 66 122 197 65 84 100 69 163 106 195 144 37 89 171 transmembrane protein (AHRD V3.3 *-* AT5G67550.1) Solyc12g042123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042170.3 39 116 159 149 146 239 226 133 79 65 145 92 99 94 153 Adp-ribosylation factor gtpase-activating protein agd3 (AHRD V3.3 *-* A0A314L4B5_NICAT) Solyc12g042180.1 13 30 13 29 42 53 39 52 35 25 16 34 20 33 60 Adp-ribosylation factor gtpase-activating protein agd3 (AHRD V3.3 *-* A0A314L4B5_NICAT),Pfam:PF16746 Solyc12g042190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40S ribosomal protein S7 (AHRD V3.3 --* A0A2G3D0S9_CAPCH) Solyc12g042200.2 284 310 264 245 182 235 251 249 253 169 199 216 312 339 204 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1M8Q5_ARTAN) AT5G50970 Solyc12g042210.2 47 54 51 38 33 33 28 30 96 55 141 36 82 35 52 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3B398_CAPCH) AT5G61890 Solyc12g042215.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3M2C0_TRIPR) ATMG00240 Solyc12g042230.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta (AHRD V3.3 *-* B3TLW1_ELAGV) Solyc12g042240.2 195 360 274 292 529 473 493 667 429 396 214 414 221 292 236 Major facilitator superfamily protein (AHRD V3.3 *-* F4IPF3_ARATH) Solyc12g042250.3 393 614 750 614 854 1085 1078 779 537 511 733 512 430 466 615 Major facilitator superfamily protein (AHRD V3.3 *-* A0A1P8AP16_ARATH) Solyc12g042260.3 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 Peptide transporter 1 (AHRD V3.3 *** Q7XAC3_VICFA) Solyc12g042270.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 *-* F4IPF3_ARATH) Solyc12g042280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Major facilitator superfamily protein (AHRD V3.3 *** F4IPF3_ARATH) Solyc12g042300.2 18 26 42 35 52 77 79 58 70 37 33 62 37 48 41 Major facilitator superfamily domain, general substrate transporter (AHRD V3.3 *** A0A2U1MMH9_ARTAN) AT2G02040 Solyc12g042330.1 0 0 0 0 0 2 0 1 0 0 3 0 0 0 0 Splicing factor 3B subunit 4 (AHRD V3.3 *-* A0A2G3CZV3_CAPCH) Solyc12g042340.2 0 11 1 9 34 15 21 36 13 3 11 9 2 13 0 hypothetical protein (AHRD V3.3 *** AT5G61865.1) AT5G61865 Solyc12g042350.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g150116.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ubiquitin-like-specific protease ESD4 (AHRD V3.3 --* XP_022853332.1) Solyc12g042360.3 712 1010 828 683 983 848 925 1119 964 1028 729 975 896 851 714 Exostosin-like (AHRD V3.3 *** A0A200R3S4_9MAGN) AT5G61840 Solyc12g042370.3 0 1 0 0 0 3 0 0 0 1 0 6 8 1 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1MGW3_ARTAN) AT5G51030 Solyc12g042380.2 1696 1276 715 1027 639 639 701 575 1073 1617 541 673 2545 1038 987 Stress up-regulated Nod 19 (AHRD V3.3 *** A0A200R3S5_9MAGN) AT5G61820 Solyc12g042390.1 30 189 124 158 153 114 60 51 182 104 95 141 485 228 101 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I4GID7_9ROSI) AT3G12460 Solyc12g042395.1 24 54 134 59 46 99 89 41 29 20 49 56 67 106 92 Unknown protein Solyc12g042400.1 21 34 27 58 52 43 51 73 25 41 15 61 22 60 11 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PPN4_9MAGN) Solyc12g042430.2 222 492 377 354 439 525 550 500 385 314 540 501 377 470 315 Inositol polyphosphate multikinase (AHRD V3.3 *** A0A2G2VGT7_CAPBA) AT5G61760 Solyc12g042440.2 592 620 584 609 639 632 713 729 698 582 575 691 732 681 581 FRIGIDA-like protein (AHRD V3.3 *** A0A1U8F5D5_CAPAN) Solyc12g042460.2 23 6 1 21 13 13 3 11 14 4 15 2 16 9 14 4-coumarate:CoA ligase (AHRD V3.3 *** Q42879_LITER) AT3G21240 Solyc12g042470.2 134 100 40 82 2 11 3 4 40 29 33 45 64 60 253 Non-functional NADPH-dependent codeinone reductase 2 (AHRD V3.3 *** A0A2G2YQM6_CAPAN) AT1G59950 Solyc12g042480.3 168 84 71 96 11 15 14 23 62 55 92 46 85 102 111 Cytochrome (AHRD V3.3 *** A0A2G2Y725_CAPAN) Solyc12g042485.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DDE_4 domain-containing protein (AHRD V3.3 *** A0A1Q3B541_CEPFO) Solyc12g042500.2 46 44 41 66 59 52 45 36 22 22 71 17 25 46 99 Gibberellin-regulated family protein (AHRD V3.3 *** A0A2U1P8W2_ARTAN) AT5G59845 Solyc12g042505.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Gibberellin-regulated family protein (AHRD V3.3 *** A0A2U1P8W2_ARTAN) Solyc12g042520.3 8 13 18 6 0 1 1 0 3 9 5 0 5 5 6 Gibberellin-regulated family protein (AHRD V3.3 *** A0A2U1P8W2_ARTAN) AT5G59845 Solyc12g042530.2 4 12 4 25 30 37 28 22 10 10 16 14 10 3 0 Phosphatidylinositol-glycan biosynthesis class F protein (AHRD V3.3 *** A0A1J3EIG4_NOCCA) AT1G16040 Solyc12g042540.1 67 80 136 130 98 136 173 69 83 90 188 78 118 139 146 Ephrin-A3 protein (AHRD V3.3 *** Q94K72_ARATH) AT1G79660 Solyc12g042545.1 35 45 61 52 41 42 48 56 41 32 47 41 59 51 60 Unknown protein Solyc12g042550.2 13 7 13 40 9 5 0 1 5 1 24 0 10 10 110 Unknown protein Solyc12g042560.3 1 5 4 6 0 2 2 7 0 5 1 0 3 7 0 Heat shock 70 kDa protein (AHRD V3.3 *-* A0A1U8FVW2_CAPAN) Solyc12g042565.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1J3EPT6_NOCCA) Solyc12g042570.2 405 341 415 389 247 303 313 229 306 219 397 212 487 453 556 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1P9P3_ARTAN) Solyc12g042580.2 93 224 448 336 284 328 219 238 333 234 397 203 296 256 305 Plastocyanin-like (AHRD V3.3 *** A0A200PSX2_9MAGN) Solyc12g042590.2 4 2 9 11 0 0 1 0 22 13 4 2 3 1 2 WRKY transcription factor 43 Solyc12g042600.2 604 1327 709 573 688 689 733 487 663 1406 988 504 4511 939 1564 Glycosyltransferase (AHRD V3.3 *** B1Q468_ANTMA) AT2G36750 Solyc12g042603.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxisome biogenesis protein 2 (AHRD V3.3 *-* A0A2G2X6N8_CAPBA) Solyc12g042607.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc12g042620.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *-* B1Q468_ANTMA) Solyc12g042625.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc12g042640.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1MVW0_ARTAN) Solyc12g042650.2 1863 4350 3560 2731 3531 3559 3573 3584 2099 2100 2391 2664 4759 3951 3199 40S ribosomal protein S12 (AHRD V3.3 *** A0A1U8DVK6_CAPAN) AT2G32060 Solyc12g150117.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger, GRF-type (AHRD V3.3 *-* A0A2U1NTQ9_ARTAN) Solyc12g042680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042690.3 426 277 282 446 375 365 389 370 271 349 372 290 274 266 306 F-box family protein (AHRD V3.3 *-* S8CP16_9LAMI) Solyc12g042695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042700.3 540 757 1160 915 997 891 956 877 780 592 1116 826 1016 926 1000 tyrosine sulfotransferase-like protein (AHRD V3.3 *** AT4G22000.1) AT4G22000 Solyc12g042705.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042720.3 671 661 681 446 563 498 446 506 488 387 501 420 678 681 766 tyrosine sulfotransferase-like protein (AHRD V3.3 *** AT4G22000.1) Solyc12g042730.1 35 17 12 4 0 6 2 3 13 25 52 12 4 26 3 VQ motif-containing protein (AHRD V3.3 *** A0A2U1PE46_ARTAN) Solyc12g042740.2 666 766 788 734 761 670 698 749 863 607 865 667 927 874 743 54-kD signal recognition particle AT1G48900 Solyc12g042750.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ubiquitin system component Cue (AHRD V3.3 *-* A0A200QTD9_9MAGN) Solyc12g042760.1 65 314 234 293 251 253 220 344 396 263 146 250 268 301 95 Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* A0A2U1PY75_ARTAN) AT1G80080 Solyc12g042770.3 639 484 472 435 240 299 341 265 460 497 576 330 369 417 728 Post-illumination chlorophyll fluorescence increase (AHRD V3.3 *** A0A2U1NCC2_ARTAN) AT3G15840 Solyc12g042780.2 3 1 12 4 0 0 1 1 1 1 2 0 0 4 0 Cupredoxin (AHRD V3.3 *-* A0A2U1MB64_ARTAN) Solyc12g042790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RBR-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3C422_CAPCH) Solyc12g042793.1 521 252 338 464 381 329 315 258 343 390 357 391 179 272 278 coiled-coil domain-containing protein 18 (AHRD V3.3 *-* XP_010325663.1) Solyc12g042797.1 0 9 4 5 8 1 4 1 15 8 36 12 0 6 19 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc12g042830.3 5 5 21 4 0 2 1 0 3 3 6 0 2 5 1 Class I heat shock protein (AHRD V3.3 *-* A0A2U1P7Z6_ARTAN) Solyc12g042840.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Lactoylglutathione lyase / glyoxalase I family protein (AHRD V3.3 *** A0A2U1MV65_ARTAN) AT1G80160 Solyc12g042845.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MQ97_TRIPR) ATMG00240 Solyc12g042850.2 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 late embryogenesis abundant protein 2-like (AHRD V3.3 --* XP_021298725.1) Solyc12g042855.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) ATMG00240 Solyc12g042860.3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042870.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042880.3 41 26 42 55 24 43 58 28 19 36 6 36 43 54 62 DUF1644 domain-containing protein (AHRD V3.3 *** A0A1Q3BXX3_CEPFO) Solyc12g042890.2 21 210 211 99 482 499 474 418 140 42 137 224 151 114 97 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1Q9V2_ARTAN) AT1G52700 Solyc12g042900.2 3253 3847 3572 5139 3812 3404 4117 5063 2507 3936 3038 3911 4513 3474 3089 Cytochrome c oxidase subunit 5b-1, mitochondrial (AHRD V3.3 *** A0A1U8EZG2_CAPAN) AT3G15640 Solyc12g042910.2 288 394 223 215 473 535 569 531 382 230 145 396 145 224 122 DNA photolyase (AHRD V3.3 *** A0A200PQM0_9MAGN) AT3G15620 Solyc12g042920.2 960 1175 957 1012 1300 1392 1468 1239 1101 1144 826 1009 1238 909 887 Cytochrome c1 (AHRD V3.3 *** A0A200Q1S0_9MAGN) Solyc12g042930.2 1 7 18 0 8 2 6 6 17 5 25 2 0 13 3 DUF642 domain-containing protein (AHRD V3.3 *** A0A1Q3BMB3_CEPFO) Solyc12g042950.2 4317 4080 6765 5086 2103 2495 2581 2227 5256 3486 5809 5073 4801 6901 7053 ADP,ATP carrier protein (AHRD V3.3 *** A0A2G2Y8J4_CAPAN) AT1G80300 Solyc12g042960.3 1 8 26 21 40 32 35 27 9 6 6 13 24 20 11 PII%2C uridylyltransferase (DUF2921) (AHRD V3.3 *** AT1G52780.1) Solyc12g042965.2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 agamous-like MADS-box protein AGL80 (AHRD V3.3 *-* XP_019066947.1) Solyc12g042963.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042964.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g150118.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g042980.2 2 0 0 1 3 0 3 3 5 0 3 0 0 7 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1MSG8_ARTAN) Solyc12g042990.3 2615 2406 2099 2216 2071 2284 2206 2219 2105 2345 1938 2143 2220 2547 2021 CASC3/Barentsz eIF4AIII binding protein (AHRD V3.3 *** AT1G80000.3) AT1G80000 Solyc12g043000.3 1544 2514 1833 1947 2147 2322 2457 2567 2506 1783 1848 1884 2100 2244 2198 Coatomer subunit beta' (AHRD V3.3 *** A0A2I4GPU3_9ROSI) AT1G52360 Solyc12g043020.2 1717 2656 2251 4014 2871 2553 3560 3782 2287 3324 2515 3027 2611 2856 2110 Dihydroxy-acid dehydratase (AHRD V3.3 *** A0A2G3CHU1_CAPCH) AT3G23940 Solyc12g043030.3 6 92 38 64 75 60 71 119 130 94 30 14 74 98 97 Sulfate transporter (AHRD V3.3 *-* A1YKF8_BRASY) Solyc12g043040.1 17 186 189 236 213 213 287 211 245 120 133 38 185 251 403 Sulfate transporter (AHRD V3.3 *** A1YKF8_BRASY) Solyc12g043060.1 72 54 29 52 23 44 40 50 35 70 51 31 49 53 51 protein SYS1 homolog (AHRD V3.3 *-* A0A2I4DZD6_9ROSI) Solyc12g043070.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 RING-finger%2C DEAD-like helicase%2C PHD and SNF2 domain-containing protein (AHRD V3.3 *-* AT2G40770.3) Solyc12g043090.3 1315 743 836 848 934 872 864 758 659 732 878 817 804 753 1146 trihelix transcription factor ASIL2-like (AHRD V3.3 *** A0A2I4GA85_9ROSI) Solyc12g043095.1 46 15 61 10 10 22 16 6 11 22 40 14 14 6 17 Unknown protein Solyc12g043100.2 331 131 135 114 87 115 143 151 145 155 97 151 116 147 126 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XLI8_CAPBA) AT3G16010 Solyc12g043110.2 3288 4428 2471 2380 3427 3290 3336 3914 3190 2738 2085 2920 4266 3366 2572 LETSW12 AT1G79920 Solyc12g043120.2 2806 3655 2457 2264 2845 2753 2927 3176 2873 2313 1695 2553 3928 3326 2623 Heat shock protein 70 family (AHRD V3.3 *** A0A200PNX6_9MAGN) AT1G79920 Solyc12g043150.3 13 4 2 9 20 32 19 18 3 2 14 12 7 7 42 Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *-* Q8L402_ARATH) AT1G79910 Solyc12g043160.3 1519 1776 3253 2438 2605 2770 2859 2122 1823 1490 3227 1821 2366 2350 3719 Translation machinery associated TMA7 (AHRD V3.3 *** A0A2U1KUC0_ARTAN) AT1G15270 Solyc12g150119.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Sulfite exporter TauE/SafE family protein (AHRD V3.3 *-* A0A1P8B1L3_ARATH) Solyc12g043170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g044170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pvr4 (AHRD V3.3 *-* A0A1D5AHY8_CAPAN) Solyc12g044180.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Disease resistance protein (AHRD V3.3 *-* A0A200QUI0_9MAGN) Solyc12g044190.3 830 491 939 753 287 392 446 254 713 472 1402 396 504 752 1319 Pvr4 (AHRD V3.3 *** A0A1D5AHY8_CAPAN) Solyc12g044200.3 696 573 600 871 316 489 537 357 825 468 821 628 425 569 1055 Disease resistance protein (AHRD V3.3 *-* A0A2U1P003_ARTAN) Solyc12g044220.3 1674 1238 1260 1514 1333 1420 1446 1334 1496 1454 1633 1368 1215 1401 1488 Phox-associated domain,Sorting nexin (AHRD V3.3 *** A0A2U1L9W5_ARTAN) Solyc12g044230.2 501 572 1078 647 752 776 748 627 748 1194 1290 715 559 605 657 Sulfite exporter TauE/SafE family protein (AHRD V3.3 *** A0A2U1KY14_ARTAN) Solyc12g044240.3 480 251 271 288 375 406 336 311 230 439 312 269 163 245 350 Dynein light chain (AHRD V3.3 *** A0A2G3D067_CAPCH) AT3G16120 Solyc12g044250.2 10 4 0 5 18 15 1 13 21 3 4 3 5 22 0 2-hydroxyacid dehydrogenase (AHRD V3.3 *** A9CH04_AGRFC) Solyc12g044260.2 0 4 0 3 0 1 0 0 0 0 0 0 0 1 7 2-hydroxyacid dehydrogenase (AHRD V3.3 *** A9CH04_AGRFC) AT1G79870 Solyc12g044270.2 0 3 4 3 1 2 0 0 14 1 6 0 0 0 3 Rop guanine nucleotide exchange factor 9 (AHRD V3.3 *** A0A2G3BHY6_CAPCH) AT1G79860 Solyc12g044280.2 634 1359 1242 1549 3242 3366 3301 3074 1909 1684 1454 1674 826 826 1188 Photosystem I reaction center subunit VI, chloroplastic (AHRD V3.3 *** A0A2G3D0C1_CAPCH) AT3G16140 Solyc12g044290.2 456 552 456 410 504 423 366 508 767 581 255 549 528 532 239 Malonate--CoA ligase (AHRD V3.3 *-* A0A2G3A3J5_CAPAN) Solyc12g044300.2 494 572 663 765 419 530 458 478 734 545 580 477 639 573 620 Malonate--CoA ligase (AHRD V3.3 *** A0A2G2Y8M1_CAPAN) AT3G16170 Solyc12g044310.2 512 1242 1321 1570 1675 1882 1651 1634 1887 1453 1789 1792 1102 1269 698 Protein NRT1/ PTR FAMILY 1.1 (AHRD V3.3 *** A0A2G2WPC3_CAPBA) AT1G52190 Solyc12g044320.2 237 185 184 295 223 264 249 234 216 215 224 284 120 179 132 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1MAA7_ARTAN) Solyc12g044330.2 227 508 978 1017 2264 1944 1763 1831 2674 2516 1985 713 274 175 326 tonoplast intrinsic protein 2.1 AT3G16240 Solyc12g044350.1 67 54 41 31 52 45 48 76 46 56 9 28 38 44 17 DNA primase (AHRD V3.3 *-* A0A2U1Q4Y3_ARTAN) Solyc12g044360.2 6 3 0 2 0 0 2 1 0 0 0 1 1 1 1 Unknown protein Solyc12g044370.3 709 711 898 663 597 819 825 659 739 693 657 616 798 829 770 zinc phosphodiesterase ELAC protein 2-like (AHRD V3.3 *** A0A2I4DQ69_9ROSI) Solyc12g044380.3 35 55 44 68 73 70 58 42 63 48 41 38 57 64 51 Cytochrome c oxidase 19-2 (AHRD V3.3 *** A0A2U1PU27_ARTAN) AT1G69750 Solyc12g044390.3 0 2 0 1 0 0 6 1 1 0 0 4 2 3 0 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G3BNS6_CAPCH) Solyc12g044400.3 1154 1447 1186 1367 1264 1428 1515 1531 1613 1275 1135 1428 978 1609 1247 ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A2I0W975_9ASPA) AT3G16290 Solyc12g044410.2 2483 2400 2822 3039 2745 2967 3567 3120 2983 2610 2644 2346 3772 3518 3340 Homeobox leucine-zipper protein (AHRD V3.3 *** Q76CL1_ZINVI) AT1G52150 Solyc12g044420.1 1177 806 364 1299 1207 723 693 727 818 931 461 502 1027 750 792 Avr9/Cf-9 rapidly elicited protein (AHRD V3.3 *** Q9ZU12_ARATH) AT1G52140 Solyc12g044430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g044435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc12g044440.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger protein (AHRD V3.3 *-* A0A200QX85_9MAGN) Solyc12g044450.2 29 52 98 85 49 59 47 47 58 57 80 87 99 48 119 Protein trichome birefringence-like 42 (AHRD V3.3 *** A0A2G2VRF9_CAPBA) AT1G78710 Solyc12g044455.1 875 445 621 545 298 298 337 246 375 437 485 391 416 508 575 TMV resistance protein N (AHRD V3.3 *-* A0A2G3DF54_CAPCH) Solyc12g044520.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QHH9_9MAGN) AT5G02790 Solyc12g044530.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200QHH9_9MAGN) AT5G02790 Solyc12g044540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 zinc finger BED domain-containing protein RICESLEEPER 2-like (AHRD V3.3 *-* A0A2I4HS67_9ROSI) Solyc12g044560.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance transporter 5a (AHRD V3.3 *-* I6WUX5_TOBAC) Solyc12g044570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance transporter 5 (AHRD V3.3 *-* I6XGC6_NICPL) Solyc12g044580.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pleiotropic drug resistance transporter 5a (AHRD V3.3 *-* I6WUX5_TOBAC) Solyc12g044585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g044590.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g044600.3 7635 8033 6111 6996 5580 5423 5674 5926 8345 8169 5462 6967 7442 5884 6527 NADP-malic enzyme AT1G79750 Solyc12g044610.2 2348 1203 888 1250 1175 1192 1191 1083 877 1466 1338 1032 977 944 1210 Transcription factor MYB1R1 (AHRD V3.3 *** A0A2G3B343_CAPCH) AT3G16350 Solyc12g044620.2 58 250 145 272 392 420 425 477 187 131 168 270 55 134 157 hypothetical protein (AHRD V3.3 *** AT4G12540.5) AT4G12540 Solyc12g044630.2 10 102 82 94 49 36 42 58 60 26 53 39 58 41 60 Profilin (AHRD V3.3 *** A0A1U8F126_CAPAN) AT2G19770 Solyc12g044640.2 2681 1706 1332 1507 1357 1116 1086 1286 1357 2056 1754 1651 2222 1759 1679 Mediator of RNA polymerase II transcription subunit 6 (AHRD V3.3 *** A0A2G3D0R6_CAPCH) AT3G21350 Solyc12g044650.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g150120.1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* C6L7Y9_HORBU) Solyc12g044660.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Anthocyanidin 3-O-glucoside-6''-O-malonyltransferase (AHRD V3.3 *-* Q6WB13_CHRMO) Solyc12g044670.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF868 family protein (DUF868) (AHRD V3.3 *** Q9SI11_ARATH) Solyc12g044680.1 4 2 0 0 6 1 0 0 1 0 0 0 0 0 2 Unknown protein Solyc12g150121.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AP2 domain-containing protein/B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3CSS8_CEPFO) Solyc12g044690.3 0 1 1 0 0 0 0 0 1 0 0 0 0 0 1 Lysine--tRNA ligase (AHRD V3.3 *-* A0A2G3CAI2_CAPCH) Solyc12g044693.1 0 0 0 0 5 5 9 3 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3IZ43_NOCCA) Solyc12g044695.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g044697.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *** A0A2U1PDJ8_ARTAN) Solyc12g044700.2 482 397 399 412 388 402 382 303 287 253 341 316 393 390 369 F-box domain, Leucine-rich repeat domain, L domain-like protein (AHRD V3.3 *-* A0A2U1PDH8_ARTAN) Solyc12g044710.1 4 0 16 12 4 7 4 0 4 3 12 13 3 15 27 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT5G09530.1) Solyc12g044720.2 6439 6702 8850 5390 5964 7160 5601 5248 4720 4270 7059 4831 8006 7217 8679 60S ribosomal protein L28 (AHRD V3.3 *** B3TLS3_ELAGV) AT2G19730 Solyc12g044730.2 157 108 96 85 79 100 83 72 87 115 64 62 107 79 101 40S ribosomal protein S15a (AHRD V3.3 *** B6U773_MAIZE) AT2G19720 Solyc12g044740.2 2307 2472 2282 2118 2115 1989 2053 2284 2419 1915 1837 2015 3230 2562 2329 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G5DX92_SILLA) AT1G51710 Solyc12g044750.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectate lyase (AHRD V3.3 *** A0A2G3B368_CAPCH) AT5G09280 Solyc12g044760.3 0 1 2 5 2 5 1 1 0 2 9 0 1 0 0 Hyp O-arabinosyltransferase-like protein (AHRD V3.3 *** AT5G13500.3) Solyc12g044770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g044775.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A1J3DTY1_NOCCA) AT5G03970 Solyc12g044780.2 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A1J3FNS6_NOCCA) AT5G03970 Solyc12g044790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *-* A0A1J3FNS6_NOCCA) AT5G03970 Solyc12g044795.1 4 7 1 2 4 7 12 6 2 4 0 1 0 2 0 Unknown protein Solyc12g044800.3 875 823 807 819 774 820 933 714 714 718 567 647 835 744 790 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** A0A2G3B367_CAPCH) AT1G17720 Solyc12g044810.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter C family member 8 (AHRD V3.3 *-* A0A2G3CTD0_CAPCH) Solyc12g044820.3 141 257 222 145 218 231 292 224 226 494 361 248 604 165 130 ABC transporter C family member 8 (AHRD V3.3 *** A0A2G2W0I8_CAPBA) AT3G21250 Solyc12g044830.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g044840.2 148 520 637 593 996 1060 1077 1179 682 376 631 997 533 583 373 Proline-rich receptor-like protein kinase PERK13 (AHRD V3.3 *** A0A2G2XXB3_CAPAN) AT3G13690 Solyc12g044850.2 851 424 634 490 517 578 455 471 440 717 510 450 582 420 447 WAS/WASL-interacting family protein (AHRD V3.3 *** AT1G55160.1) Solyc12g044860.3 1334 1235 1053 1175 1277 1121 1234 1206 1013 978 1106 1016 1283 1224 957 ethylene-responsive RNA helicase AT1G55150 Solyc12g044880.2 303 472 876 583 516 559 638 547 815 413 879 483 457 522 528 ss-galactosidase, clone tEG1B AT3G13750 Solyc12g044890.2 74 69 68 86 58 78 116 99 49 54 47 62 53 48 57 Transmembrane 9 superfamily member (AHRD V3.3 *** A0A2G2XXI0_CAPAN) Solyc12g044900.3 15 8 15 19 68 50 29 43 8 10 2 10 20 13 15 Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** A0A2G2Y8R1_CAPAN) Solyc12g044910.2 163 415 518 513 627 574 697 512 481 387 409 449 424 434 498 copz2 nonclathrin coat protein zeta2-COP AT1G60970 Solyc12g044920.3 270 288 403 380 329 397 356 252 249 271 278 398 263 345 650 Phospholipid-transporting ATPase (AHRD V3.3 *** A0A1U8F7U0_CAPAN) AT1G17500 Solyc12g044930.3 915 345 261 237 121 147 166 114 159 439 151 142 584 299 259 F-box protein (AHRD V3.3 *** A0A2G3B4N2_CAPCH) Solyc12g044940.2 609 338 173 206 149 160 159 147 345 443 229 191 659 382 267 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q94AL3_ARATH) Solyc12g044950.3 2197 452 487 3147 243 239 176 88 411 473 720 158 1032 800 5105 lipid desaturase Solyc12g044952.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g044954.1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cytochrome (AHRD V3.3 *** A0A2G2Y725_CAPAN) Solyc12g044956.1 77 36 77 152 56 110 80 67 97 106 148 85 39 29 184 Cytochrome (AHRD V3.3 *** A0A2G2Y725_CAPAN) Solyc12g044958.1 0 0 0 0 3 0 0 0 1 0 0 0 2 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc12g045020.2 133 70 11 48 0 0 0 2 12 51 51 4 43 55 28 Cytochrome (AHRD V3.3 *** A0A2G2Y725_CAPAN) Solyc12g045030.2 3696 1880 1846 788 207 225 162 191 686 2449 1817 584 2046 1671 689 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q94AL3_ARATH) Solyc12g045033.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3NZR4_TRIPR) Solyc12g045035.1 127 77 14 31 3 4 3 6 9 56 19 11 120 102 29 Fatty acid desaturase (AHRD V3.3 *** A0A200QRI1_9MAGN) Solyc12g045037.1 2 2 0 0 0 0 0 0 0 0 0 0 1 1 0 Omega-6 fatty acid desaturase (AHRD V3.3 *** Q461Q1_HEVBR) Solyc12g049030.1 645 441 138 43 1 0 1 1 24 285 151 21 755 603 99 Fatty acid desaturase (AHRD V3.3 *** A0A200QRI1_9MAGN) Solyc12g049040.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g049050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g049060.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *-* Q8VWM5_SOLLC) Solyc12g049070.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 extensin-like Solyc12g049080.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g049090.3 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g049095.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g049100.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD40 repeat (AHRD V3.3 *** A0A200QZN3_9MAGN) Solyc12g049110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g049120.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter B family member (AHRD V3.3 *** A0A2K3NDJ7_TRIPR) Solyc12g049130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter B family member (AHRD V3.3 *** A0A2K3MA58_TRIPR) Solyc12g049140.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g049150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g049160.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g049170.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g049175.1 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3D5A9_NOCCA) Solyc12g049180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g049190.3 2 7 0 1 0 0 0 0 0 7 0 0 10 0 0 Hcr2-0B (AHRD V3.3 *** Q9ZTJ9_SOLLC) Solyc12g049200.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *** A0A1U8F785_CAPAN) Solyc12g049210.1 3 19 19 5 7 12 18 11 2 6 6 4 8 9 17 DUF3511 domain-containing protein (AHRD V3.3 *** A0A1Q3CXE7_CEPFO) Solyc12g049220.3 1609 1517 1329 1540 1037 1064 976 1138 837 1048 1174 1121 1790 1592 1714 Mitochondrial import inner membrane translocase subunit TIM23-like protein (AHRD V3.3 *** A0A2K3MPU1_TRIPR),Pfam:PF02466 AT1G17530 Solyc12g049230.2 2818 2477 2159 2364 1908 2223 2260 2234 1946 1828 1962 1957 2486 2616 2234 DUF1296 domain-containing protein (AHRD V3.3 *** A0A1Q3CXG7_CEPFO) AT3G13990 Solyc12g150122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Zinc finger BED domain-containing protein RICESLEEPER 2 (AHRD V3.3 *** A0A2U1N0B2_ARTAN) Solyc12g049250.2 25 79 145 193 1 1 0 0 92 116 35 35 473 102 916 Unknown protein Solyc12g049255.1 14 0 5 0 0 0 0 0 0 5 0 0 0 2 0 protein BIG GRAIN 1-like B (AHRD V3.3 *-* A0A2I4GKW9_9ROSI) Solyc12g049270.3 415 187 199 155 117 117 96 178 214 172 115 176 173 211 140 Developmentally regulated GTP binding protein (AHRD V3.3 *** O22445_PEA) Solyc12g049280.3 23 29 43 43 75 60 57 61 67 41 61 46 54 43 68 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** F4IDE8_ARATH) AT1G72640 Solyc12g049290.2 374 255 299 237 213 238 209 163 206 227 256 198 342 294 304 protein ELF4-LIKE 4 (AHRD V3.3 *** A0A2I4FTW2_9ROSI) Solyc12g049300.2 0 1 0 1 1 8 3 3 1 1 2 4 0 0 0 R2R3MYB transcription factor 54 Solyc12g049310.2 313 234 361 294 295 334 300 197 244 265 384 278 324 351 373 Ubiquitin-like protein ATG12 (AHRD V3.3 *** A0A2G3B3P3_CAPCH) AT1G54210 Solyc12g049320.3 17 17 20 15 3 8 8 8 58 53 39 180 49 134 73 Nodulation-signaling pathway 1 protein (AHRD V3.3 *** A0A2G2VHE0_CAPBA) Solyc12g049330.2 296 250 249 229 218 277 242 295 241 260 213 308 324 283 247 E3 Ubiquitin ligase (AHRD V3.3 *** A0A2U1NTB6_ARTAN) AT1G54150 Solyc12g049340.3 1 0 1 0 0 0 0 0 3 0 0 0 0 1 0 3-ketoacyl-CoA synthase (AHRD V3.3 *-* A0A218WTE5_PUNGR) Solyc12g049350.2 14 47 11 64 5 5 9 10 123 13 73 36 31 15 128 R2R3MYB transcription factor 11 AT5G49330 Solyc12g049360.2 36 24 63 15 3 10 2 5 15 24 49 2 51 36 35 Protein kinase superfamily protein (AHRD V3.3 *** A0A2U1QC97_ARTAN) Solyc12g049365.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g049370.2 289 271 308 324 313 324 302 279 297 375 275 292 361 349 286 Nucleoside diphosphate kinase (AHRD V3.3 *** A0A2G3AXF2_CAPCH) AT1G17410 Solyc12g049380.3 5 1 4 14 3 6 1 3 20 1 10 8 3 9 18 hypothetical protein (AHRD V3.3 *** AT1G72490.2) AT1G72490 Solyc12g049390.2 457 628 568 642 439 453 532 547 609 638 592 717 548 504 756 Transmembrane receptor (AHRD V3.3 *** A0A200Q182_9MAGN) AT1G72480 Solyc12g049400.2 129 452 507 339 321 374 282 342 558 732 612 487 434 400 231 Tify (AHRD V3.3 *** A0A200Q172_9MAGN) Solyc12g049410.3 1752 1439 1135 1002 972 1147 1024 1170 1208 1247 970 1088 1400 1420 1141 Nuclear pore complex protein (AHRD V3.3 *** A0A2G2XYI0_CAPAN) AT3G14120 Solyc12g049420.2 885 609 783 727 527 620 603 471 616 682 790 665 647 652 724 25.3 kDa vesicle transport protein (AHRD V3.3 *** A0A2G3AXE7_CAPCH) AT1G11890 Solyc12g049430.1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase-like protein (AHRD V3.3 *** W7U8L5_9STRA) Solyc12g049440.3 11 12 23 5 24 12 19 16 15 17 1 19 20 14 19 Actin-related protein 8 (AHRD V3.3 *-* A0A314L356_NICAT) Solyc12g049470.3 13 24 20 14 37 17 20 22 18 5 42 9 17 12 2 Actin-related protein 8 (AHRD V3.3 *-* A0A2G2Z628_CAPAN) Solyc12g049475.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g049500.3 15 44 9 34 25 25 27 15 20 26 26 24 13 10 39 DUF936 domain-containing protein (AHRD V3.3 *** A0A1Q3B0V3_CEPFO) AT3G14170 Solyc12g049510.3 492 585 820 729 769 902 1060 845 780 596 592 794 450 661 748 GPI-anchored adhesin-like protein (AHRD V3.3 *-* AT3G14172.2) Solyc12g049520.2 30 61 45 56 60 71 65 98 104 52 39 42 27 60 52 COP1-interacting protein-like protein (AHRD V3.3 *-* F4IDB4_ARATH) Solyc12g049530.2 205 101 119 125 47 87 75 58 59 83 168 48 73 115 146 Phosphoinositide phosphatase SAC2 (AHRD V3.3 *-* A0A2G2V918_CAPBA) Solyc12g049540.3 604 245 211 172 131 133 138 144 183 303 195 141 215 276 249 Phosphoinositide phosphatase SAC2 (AHRD V3.3 *-* A0A2G2V918_CAPBA) Solyc12g049550.2 9 18 32 65 63 57 33 23 35 38 35 51 7 24 8 GDSL esterase/lipase 5-like (AHRD V3.3 *** A0A1U8ER27_CAPAN) AT1G53920 Solyc12g049560.2 864 693 1162 897 960 959 848 915 970 960 1176 1145 878 933 927 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2ZB67_CAPAN) AT1G53910 Solyc12g049570.3 1243 1121 1144 1024 1172 1208 1305 1213 1070 1061 938 982 1156 1128 1209 AT-rich interactive domain-containing protein 4 (AHRD V3.3 *** A0A1U8GW18_CAPAN) AT3G43240 Solyc12g049580.2 662 959 760 767 1101 862 1024 1266 1007 961 867 1094 964 838 594 translation initiation factor eIF-2B subunit alpha (AHRD V3.3 *** A0A2I4G5S8_9ROSI) AT1G53880 Solyc12g049590.2 530 456 559 704 415 587 743 421 451 306 573 444 284 465 677 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B (AHRD V3.3 *** A0A2G3B3H7_CAPCH) AT3G14270 Solyc12g049610.1 1 8 0 0 8 8 9 4 2 0 0 1 1 4 2 Unknown protein Solyc12g049611.1 306 218 175 221 211 176 236 167 178 254 148 178 192 181 81 Unknown protein Solyc12g049612.1 0 0 0 2 0 0 0 0 0 0 9 4 0 0 0 Unknown protein Solyc12g150123.1 0 0 4 0 0 1 0 0 2 2 6 8 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0WDP9_9ASPA) Solyc12g049614.1 63 37 6 9 16 8 8 1 17 37 19 23 20 17 21 Unknown protein Solyc12g049616.1 270 185 147 142 97 115 138 87 155 172 97 138 106 114 109 Unknown protein Solyc12g049618.1 366 188 231 239 197 206 307 128 272 291 424 311 116 246 250 Unknown protein Solyc12g049660.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g049670.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g055680.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LL-diaminopimelate aminotransferase (AHRD V3.3 --* AT3G14280.1) Solyc12g055683.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain (AHRD V3.3 *-* A0A200RCR7_9MAGN) Solyc12g055687.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g055700.3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 12 LL-diaminopimelate aminotransferase (AHRD V3.3 *-* AT3G14280.1) Solyc12g055710.1 26 6 2 3 0 4 5 4 10 2 42 12 8 17 8 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LDD8_ARTAN) AT1G72310 Solyc12g055720.2 3642 3178 3255 3431 4214 3782 3758 4559 3575 3960 2407 3992 2708 2664 2863 protein STRUBBELIG-RECEPTOR FAMILY 6-like (AHRD V3.3 *** A0A1U8F6E1_CAPAN) AT1G53730 Solyc12g055730.3 0 5 0 0 0 0 0 1 1 1 2 0 0 0 0 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** F4JFU8_ARATH) AT3G14360 Solyc12g055740.2 1010 1102 1351 1072 1073 1089 1073 957 1080 941 1387 1037 1378 1233 1352 Calcineurin-like metallo-phosphoesterase superfamily protein (AHRD V3.3 *** A8MQN4_ARATH) AT1G53710 Solyc12g055750.3 490 560 905 700 546 749 749 567 523 566 825 495 595 599 502 Vacuolar cation/proton exchanger (AHRD V3.3 *** K4DFQ6_SOLLC) AT1G55730 Solyc12g055760.2 953 2260 2606 2979 2865 2606 3041 2610 2011 1793 2450 1986 2276 2173 2231 ATP synthase subunit epsilon, mitochondrial (AHRD V3.3 *** A0A2G3B3J0_CAPCH) AT1G51650 Solyc12g055770.1 0 3 7 0 5 2 2 1 2 2 6 3 0 0 0 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A1U8ERM7_CAPAN) Solyc12g055780.3 3806 2057 1496 1892 1796 1759 1715 2012 1739 3119 1543 2540 1897 1694 1411 KH domain-containing protein (AHRD V3.3 *** A0A1J3JPM9_NOCCA) AT1G51580 Solyc12g055800.3 4042 5645 4746 5544 6523 5641 6284 6462 6897 5469 4905 5928 5130 5373 6474 vacuolar H+-ATPase A1 subunit isoform AT1G78900 Solyc12g055810.1 37 126 319 213 191 216 157 157 139 56 217 122 187 169 102 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B3B9_ARATH) AT5G57480 Solyc12g055820.3 146 279 233 240 242 297 330 282 226 181 209 198 340 277 325 Cinnamyl-alcohol dehydrogenase (AHRD V3.3 *** A0A2U1QH68_ARTAN) AT1G72680 Solyc12g055830.2 2293 2147 2304 2244 2076 1942 1671 1815 2241 2685 2399 1752 3678 2525 2634 Soluble inorganic pyrophosphatase (AHRD V3.3 *** A0A2G2VH82_CAPBA) AT1G01050 Solyc12g055840.2 695 1626 1914 1942 2628 2454 2783 2696 2614 1973 2307 1893 1065 1326 1620 Glucan endo-1,3-beta-glucosidase 10 (AHRD V3.3 *** A0A1U8F6Q1_CAPAN) AT1G32860 Solyc12g055850.2 183 202 239 177 224 229 222 248 196 259 170 228 186 192 165 LRAT-like domain (AHRD V3.3 *** A0A200PTG3_9MAGN) Solyc12g055855.2 247 267 384 313 265 254 283 211 256 268 365 209 378 324 521 ORMDL (AHRD V3.3 *** A0A200Q7B4_9MAGN) Solyc12g055870.2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Bidirectional sugar transporter SWEET (AHRD V3.3 *** A0A142DVH0_SOLTU) AT4G10850 Solyc12g055880.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial (AHRD V3.3 *-* A0A2G3CL46_CAPCH) Solyc12g055890.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial (AHRD V3.3 *** A0A2G2WJC6_CAPBA) Solyc12g055900.1 2 0 0 1 2 1 5 1 3 4 0 10 8 2 0 Unknown protein Solyc12g055910.3 995 742 953 770 711 868 822 658 826 775 1041 789 592 786 939 RING/U-box protein (AHRD V3.3 *** A0A1P8B7Y2_ARATH) AT4G10930 Solyc12g055920.3 33 62 167 146 139 147 124 118 75 51 101 105 61 84 85 Calcineurin B-like protein 4 (AHRD V3.3 *** A0A1U8ER88_CAPAN) Solyc12g055930.3 193 340 623 422 339 431 461 348 432 352 992 325 314 372 449 UDP-glucose 4-epimerase 4 (AHRD V3.3 *** A0A2G3B3I8_CAPCH) AT4G10960 Solyc12g055940.3 731 764 1062 896 845 857 945 879 1000 788 1159 789 597 826 1303 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT1G64430.2) AT1G64430 Solyc12g055950.2 193 118 115 133 89 133 131 101 130 114 157 97 189 163 252 Pleckstrin homology (PH) domain-containing protein (AHRD V3.3 *** AT4G23895.4) AT4G23895 Solyc12g055960.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** B6ST68_MAIZE) Solyc12g055970.3 197 765 376 866 1172 965 967 1514 853 579 464 623 617 1017 1670 Endoglucanase (AHRD V3.3 *** A0A2G3B3J7_CAPCH) Solyc12g055980.1 5 50 23 48 63 70 44 121 80 49 14 58 30 89 112 Endoglucanase (AHRD V3.3 *-* A0A2G2VH75_CAPBA) Solyc12g055990.2 237 270 297 355 303 326 312 285 308 210 207 220 235 272 313 Abscisic acid receptor PYL10 (AHRD V3.3 *** A0A2G2VH30_CAPBA) AT1G01360 Solyc12g056000.1 2 0 0 0 1 0 6 0 0 0 0 0 2 0 0 Cysteine protease (AHRD V3.3 *** A0A2U1Q178_ARTAN) Solyc12g056010.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine protease (AHRD V3.3 *** A0A2U1Q178_ARTAN) Solyc12g056020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine protease (AHRD V3.3 *** A0A2U1PKJ9_ARTAN) Solyc12g056025.1 8 16 0 7 1 1 3 1 1 1 4 1 14 1 1 Unknown protein Solyc12g056030.2 623 663 626 546 537 539 530 515 540 470 539 478 829 733 797 ribosome biogenesis protein (AHRD V3.3 *** AT2G01640.2) AT2G01640 Solyc12g056040.1 0 8 0 0 4 11 7 14 4 2 0 12 7 8 0 endochitinase A-like (AHRD V3.3 *** XP_010314523.1) Solyc12g056050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glycosyltransferase (AHRD V3.3 *** F4KHR9_ARATH) AT5G59070 Solyc12g056060.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 myosin heavy chain-like protein (AHRD V3.3 *** AT5G41780.4) AT1G64320 Solyc12g056080.2 2234 1984 1554 1387 1823 1777 1584 2058 1796 1762 1453 1782 1864 1770 1633 Crooked neck-like protein 1 (AHRD V3.3 *** A0A2G2Y8B4_CAPAN) AT5G41770 Solyc12g056090.2 96 137 212 182 152 165 215 155 112 132 98 131 133 154 120 Cox19-like CHCH family protein (AHRD V3.3 *-* F4JPC0_ARATH) Solyc12g056100.3 14997 11031 12126 10924 9426 10043 9018 9181 7489 11362 11595 9914 11297 9823 12009 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200PUP4_9MAGN) Solyc12g056110.2 735 874 1182 1266 870 976 835 819 1008 962 1055 943 1325 1089 1479 V-type proton ATPase subunit E (AHRD V3.3 *** A0A1U8GDW0_CAPAN) AT1G64200 Solyc12g056115.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056120.1 2372 2896 3096 2744 2864 2673 2388 3177 3370 2838 2350 3308 3261 3256 3429 6-phosphogluconate dehydrogenase, decarboxylating (AHRD V3.3 *** A0A2G3B307_CAPCH) AT5G41670 Solyc12g056123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056127.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056130.2 647 614 825 702 790 1058 910 697 517 465 754 664 468 546 569 BTB/POZ domain-containing protein (AHRD V3.3 *** A0A1U8EY34_CAPAN) Solyc12g056140.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056150.2 159 185 349 334 191 193 179 174 159 145 147 310 133 314 168 Peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase (AHRD V3.3 *** B6THR2_MAIZE) Solyc12g056160.2 64 102 28 101 120 96 82 94 110 114 119 104 93 87 114 Cation/H(+) antiporter 17 (AHRD V3.3 *** A0A2G2Y8P8_CAPAN) AT5G41610 Solyc12g056170.2 763 551 479 495 378 376 339 359 527 524 508 370 595 507 565 hypothetical protein (AHRD V3.3 *** AT1G64050.2) AT1G64050 Solyc12g056180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3 *** Q9SC82_TOBAC) AT4G11280 Solyc12g056190.2 26 9 109 50 38 49 21 17 35 30 87 24 16 28 42 Nuclear transport factor 2 (NTF2) family protein (AHRD V3.3 *** F4JYE8_ARATH) AT5G41470 Solyc12g056200.2 95 136 178 245 135 176 110 144 322 381 339 317 175 166 466 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3C751_CEPFO) AT4G23490 Solyc12g056210.3 3060 3965 4938 4240 5673 4507 4424 4763 3357 4673 5560 3827 5292 4010 3175 PLAC8 family protein (AHRD V3.3 *** A0A2U1LM31_ARTAN) AT5G41390 Solyc12g056220.2 3574 4615 3733 3622 7040 6312 5871 7610 5774 5158 4074 5669 2359 2880 2500 plasma membrane intrinsic protein 1.3 AT4G23400 Solyc12g056230.2 1429 1798 3503 3132 2005 1995 2176 2007 6249 4042 7166 7469 2410 3455 2849 glutathione peroxidase like encoding 2 AT1G63460 Solyc12g056240.2 228 268 265 240 314 270 314 293 225 219 251 321 291 244 322 Glutathione peroxidase (AHRD V3.3 *** A0A1U8EV38_CAPAN) AT1G63460 Solyc12g056250.2 610 1147 840 892 601 410 491 512 1846 1097 1323 986 1322 1087 983 Glutathione S-transferase (AHRD V3.3 *** A0A200QUC6_9MAGN) Solyc12g056260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Xyloglucan galactosyltransferase KATAMARI1-like protein (AHRD V3.3 *** A0A2K3MVQ6_TRIPR) AT1G63450 Solyc12g056270.2 11 45 26 35 47 50 70 41 16 14 36 25 30 50 20 Coenzyme A biosynthesis bifunctional protein CoaBC (AHRD V3.3 *** A0A316X0L4_9FLAO) Solyc12g056280.3 32 8 5 6 17 31 22 33 35 32 24 41 2 11 21 Unknown protein Solyc12g056285.1 194 99 135 123 94 120 138 93 125 94 166 122 77 78 89 S-adenosyl-L-methionine-dependent methyltransferase (AHRD V3.3 *-* A0A2U1KJ87_ARTAN) Solyc12g056290.2 517 294 281 296 214 263 230 186 234 249 282 179 181 223 287 RING/U-box superfamily protein (AHRD V3.3 *-* AT2G15530.4) Solyc12g056300.3 330 1064 638 834 1250 1390 1565 1381 1000 718 561 807 836 638 355 Receptor kinase, putative (AHRD V3.3 *** B9RC93_RICCO) AT1G63430 Solyc12g056305.1 0 4 10 0 11 6 12 3 3 15 11 10 1 0 0 LURP-one-like protein (AHRD V3.3 *** A0A1P8AWJ7_ARATH) AT1G63410 Solyc12g056310.2 0 6 0 0 1 1 0 0 0 0 0 0 0 0 0 LURP-one-like protein (AHRD V3.3 *** A0A1P8AWJ7_ARATH) AT1G63410 Solyc12g056320.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056330.1 1 0 0 0 0 2 0 0 0 1 0 0 0 0 0 Unknown protein Solyc12g056340.2 427 488 408 302 284 305 261 248 366 235 349 287 499 553 482 RNA helicase DEAD38 AT1G63250 Solyc12g056345.1 34 40 61 114 72 137 131 63 34 42 101 81 37 50 100 Unknown protein Solyc12g056350.2 179 209 209 203 291 306 369 241 194 223 160 228 197 183 117 Stress responsive alpha-beta barrel (AHRD V3.3 *** A0A200QUF2_9MAGN) AT2G32500 Solyc12g056360.1 121 51 19 3 0 0 0 0 7 46 63 8 96 56 18 Pathogenesis-related thaumatin family protein (AHRD V3.3 *** A0A2K3LJG6_TRIPR) Solyc12g056370.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pathogenesis-related thaumatin family protein (AHRD V3.3 *** A0A2K3LJG6_TRIPR) Solyc12g056380.1 0 2 0 0 0 0 0 0 0 0 0 0 2 0 1 Pathogenesis-related thaumatin family protein (AHRD V3.3 *** A0A2K3LJG6_TRIPR) Solyc12g056390.1 108 58 10 30 19 53 40 16 22 40 79 2 193 205 57 Thaumatin-like protein (AHRD V3.3 *** Q5DJS5_TOBAC) AT4G11650 Solyc12g056400.3 87 48 104 119 101 121 105 81 91 118 116 107 98 93 102 RING/U-box superfamily protein (AHRD V3.3 *** Q93YQ5_ARATH) Solyc12g056410.2 614 506 579 571 279 345 398 283 557 346 867 345 630 697 733 F-box protein PP2-A15 (AHRD V3.3 *** A0A2G2Y8Y0_CAPAN) AT1G12710 Solyc12g056420.2 2 3 0 1 0 1 4 0 6 1 1 0 5 0 0 Lysophospholipid acyltransferase 1 (AHRD V3.3 *** A0A2G2Y8X3_CAPAN) AT1G12640 Solyc12g056430.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dehydration-responsive element-binding protein 1A (AHRD V3.3 *** A0A2G2Y8V3_CAPAN) Solyc12g056440.2 516 368 444 640 417 444 565 388 460 398 473 382 426 502 787 SPX domain-containing protein (AHRD V3.3 *** D7MDY2_ARALL) AT4G22990 Solyc12g056450.2 147 250 230 297 508 330 353 508 342 271 176 466 202 280 174 3-hydroxy-3-methylglutaryl coenzyme A synthase (AHRD V3.3 *** A0A1U8F7M5_CAPAN) AT4G11820 Solyc12g056460.3 198 260 192 149 395 339 339 285 161 120 140 99 378 236 274 MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) AT4G22950 Solyc12g056470.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056480.2 0 11 0 0 2 2 1 1 5 2 6 4 0 0 0 Protein STAY-GREEN, chloroplastic (AHRD V3.3 *** A0A2G3AE59_CAPAN) Solyc12g056490.1 324 386 531 383 519 623 559 427 282 244 410 371 357 331 385 WD40 repeat (AHRD V3.3 *** A0A200PPM9_9MAGN) AT4G22910 Solyc12g056510.3 354 476 609 821 313 309 456 233 625 339 1261 402 417 472 1124 Trihelix transcription factor GTL1 (AHRD V3.3 *** A0A2G3B3E4_CAPCH) AT1G76880 Solyc12g056520.3 200 223 256 262 333 335 380 294 170 180 279 189 122 186 328 Exocyst complex component SEC5B (AHRD V3.3 *** A0A1U8F6Y7_CAPAN) AT1G76850 Solyc12g056530.2 530 488 474 560 532 505 555 472 605 521 497 495 520 515 456 Fructose-1,6-bisphosphatase (AHRD V3.3 *** A6N9A0_FLALI) AT1G43670 Solyc12g056540.1 64 866 638 719 1156 1205 972 1174 562 402 701 1011 193 689 210 Histone H3 (AHRD V3.3 *** A0A328EBD8_9ASTE) Solyc12g056550.1 504 384 536 328 250 312 277 279 277 349 733 335 471 316 506 Plant/F1M20-13 protein (AHRD V3.3 *** G7IBZ7_MEDTR) AT1G18740 Solyc12g056560.2 588 220 255 190 93 112 112 69 124 91 254 111 153 176 206 HSP20-like chaperones superfamily protein (AHRD V3.3 *-* Q9SRD6_ARATH) Solyc12g056570.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UPF0496 protein (AHRD V3.3 *** A0A2U1KPX1_ARTAN) Solyc12g056580.2 1538 1961 2460 1929 1737 1736 1750 1838 2448 2460 2695 1819 1592 1523 1839 Cellulose synthase (AHRD V3.3 *** K4DFY9_SOLLC) AT4G39350 Solyc12g056585.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HT-protein (AHRD V3.3 *-* Q8LP79_SOLPE) Solyc12g056590.2 16 19 30 8 3 12 0 0 30 22 143 0 14 21 60 Ethylene Response Factor D.2 AT5G64750 Solyc12g056600.3 41 886 200 342 530 530 556 445 625 407 173 169 511 384 212 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A2U1PL19_ARTAN),Pfam:PF13561 Solyc12g056610.3 3 11 16 119 15 13 13 5 19 16 29 11 10 3 15 Secoisolariciresinol dehydrogenase (AHRD V3.3 *** A0A1U8ETA2_CAPAN) Solyc12g056615.1 0 0 3 4 0 0 0 0 1 0 0 0 0 2 0 Unknown protein Solyc12g056620.2 25 21 16 18 10 1 8 1 11 58 4 11 38 10 15 Chlorophyll a/b binding protein domain-containing protein (AHRD V3.3 *-* A0A2U1PDX9_ARTAN) Solyc12g150124.1 127 109 127 182 80 169 107 98 49 84 158 72 49 50 168 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2I0VJ33_9ASPA) ATMG00810 Solyc12g056630.3 296 386 331 273 418 431 338 396 341 352 234 290 338 345 175 Holocarboxylase synthetase (AHRD V3.3 *** B3TM38_ELAGV) AT4G09830 Solyc12g056640.2 212 589 456 483 417 447 403 493 508 389 508 323 530 451 514 UDP-galactose transporter 2 (AHRD V3.3 *** A0A2G3CN83_CAPCH) AT1G34020 Solyc12g056650.2 5186 2347 4942 4957 1717 1788 2185 1977 4563 3947 4621 4715 3698 6329 6938 Protein GIGANTEA (AHRD V3.3 *** A0A2G3B3F7_CAPCH) AT1G22770 Solyc12g056660.3 67 241 194 293 433 456 494 361 231 186 253 251 273 268 267 Mitochondrial carrier protein (AHRD V3.3 *** A0A200QJI9_9MAGN) Solyc12g056670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056671.1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 2 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc12g056672.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine/threonine-protein phosphatase 7 long form-like protein (AHRD V3.3 *-* A0A1J3DHF8_NOCCA) Solyc12g150125.1 1 3 0 1 0 0 0 0 0 0 0 0 0 11 0 Alpha/beta-hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LX98_ARTAN) Solyc12g056674.1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LX98_ARTAN) Solyc12g056675.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LX98_ARTAN) Solyc12g056676.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056678.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alpha/beta-hydrolases superfamily protein (AHRD V3.3 *** A0A2U1LX98_ARTAN) Solyc12g056700.2 3 79 14 6 10 7 3 5 73 21 19 6 132 49 0 Secoisolariciresinol dehydrogenase (AHRD V3.3 *** A0A1U8ETA2_CAPAN),Pfam:PF13561 Solyc12g056710.3 0 0 1 0 11 20 8 1 0 0 0 0 0 6 0 Secoisolariciresinol dehydrogenase (AHRD V3.3 *** A0A1U8ETA2_CAPAN),Pfam:PF13561 Solyc12g056720.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A1U8F2B9_CAPAN) Solyc12g056730.1 67 24 12 25 1 11 9 12 17 30 26 14 13 24 24 LRR receptor-like kinase (AHRD V3.3 *** A0A072VNN3_MEDTR) AT1G34110 Solyc12g056740.2 1651 1656 1388 1088 1083 1185 1113 1130 1135 1095 1148 1315 1411 1340 1422 RNA helicase DEAD39 AT4G09730 Solyc12g056745.1 8 3 1 3 0 0 0 0 0 0 0 0 1 5 19 WRKY transcription factor (AHRD V3.3 *-* A0A2K3L8P8_TRIPR) Solyc12g056750.3 15 3 1 7 0 0 0 0 0 1 0 0 7 3 1 WRKY transcription factor 61 Solyc12g056760.2 155 125 220 182 285 318 300 229 103 217 185 200 155 124 105 WD repeat protein (AHRD V3.3 *** AT1G71780.1) AT1G71780 Solyc12g056770.3 272 347 395 361 640 716 672 659 364 316 395 421 385 334 242 F-actin-capping protein subunit beta (AHRD V3.3 *** A0A1U8EZT1_CAPAN) AT1G71790 Solyc12g056780.2 312 635 593 494 720 637 581 685 512 376 456 593 802 738 403 HSP20-like chaperone (AHRD V3.3 *** A0A2U1QD54_ARTAN) Solyc12g056790.2 2078 1270 1263 1225 576 664 655 634 1328 1947 1542 891 1412 1263 1728 NAC Transcription Factor AT1G34190 Solyc12g056800.2 1121 2208 1336 1557 2202 1774 1767 2082 2688 1753 1670 2265 2074 1746 1413 Oxidoreductase (AHRD V3.3 *** A0A200QCB4_9MAGN) AT4G09670 Solyc12g056810.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Cytochrome P450 (AHRD V3.3 *** A0A200R306_9MAGN) AT5G09970 Solyc12g056820.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Laccase (AHRD V3.3 *** K4DG13_SOLLC) AT5G48100 Solyc12g056830.1 2991 4603 4095 3731 6830 4616 4255 6358 5670 4908 4947 4738 3511 3206 4794 ATP synthase subunit delta, chloroplastic-like (AHRD V3.3 *** A0A2I4F0A5_9ROSI) AT4G09650 Solyc12g056840.2 652 1013 938 1000 1385 1205 1236 1185 1222 884 866 1071 1057 1068 745 Phosphopantothenate-cysteine ligase-like protein (AHRD V3.3 *** A0A1P8BFH8_ARATH) AT1G12350 Solyc12g056850.2 377 216 180 182 181 125 150 85 271 202 189 158 342 290 408 Chaperone protein DnaJ (AHRD V3.3 *** A0A1J3GRV8_NOCCA) AT1G77930 Solyc12g056860.2 249 206 234 389 24 37 25 18 63 101 79 39 310 336 878 Transcription factor TGA7 (AHRD V3.3 *** A0A1U8F8B9_CAPAN) AT1G77920 Solyc12g056865.1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056880.2 0 4 0 0 5 4 0 2 0 1 15 0 0 4 1 oxidoreductase%2C 2OG-Fe(II) oxygenase family protein (AHRD V3.3 *-* AT2G22260.5) Solyc12g056890.1 16 0 0 1 0 0 0 0 3 0 0 0 0 2 5 DnaJ domain-containing protein/RRM_6 domain-containing protein (AHRD V3.3 *** A0A1Q3CAH5_CEPFO) Solyc12g056900.2 131 120 139 135 185 176 192 205 125 120 164 116 106 106 176 Membrane-anchored ubiquitin-fold protein (AHRD V3.3 *** Q9ZRD0_TOBAC) AT1G22050 Solyc12g056910.2 166 163 263 207 210 244 231 190 191 137 267 219 276 240 293 zinc finger CCCH domain protein (AHRD V3.3 *** AT1G22140.3) AT1G22140 Solyc12g056920.3 27 72 257 141 276 333 285 317 103 144 51 205 18 96 31 Sulfate transporter-like protein (AHRD V3.3 *** A0A2K3NYV6_TRIPR) AT5G10180 Solyc12g056930.2 2121 1976 2722 2648 1528 1485 1448 1364 1474 1573 2096 1279 3715 2639 3042 sulfate transporter 2 AT1G78000 Solyc12g056940.2 1815 2416 1950 2388 2131 2530 2661 2501 3306 2199 1893 2341 2130 2616 2834 Acetyl CoA carboxylase (AHRD V3.3 *** Q42793_SOYBN) AT1G36160 Solyc12g056950.2 279 227 152 282 187 125 84 154 136 242 36 52 212 75 41 FCS-Like Zinc finger 6 (AHRD V3.3 *** FLZ6_ARATH) AT1G78020 Solyc12g056960.2 27 54 81 70 6 8 11 8 66 56 90 42 46 70 88 'putative glucan 1,3-beta-glucosidase (AHRD V3.3 *** Q5W708_ORYSJ) Solyc12g056970.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g056980.1 327 206 282 444 235 202 215 117 372 294 467 184 198 154 256 Ethylene-responsive transcription factor (AHRD V3.3 *-* A0A2G2ZQC4_CAPAN) AT1G78080 Solyc12g056990.1 63 123 170 108 53 67 59 65 120 79 81 56 102 99 155 nucleolar GTP-binding protein (AHRD V3.3 *** AT1G78110.1) Solyc12g056993.1 64 45 50 50 80 29 51 43 58 54 30 47 24 60 76 Unknown protein Solyc12g056995.2 0 0 0 4 0 0 0 0 0 0 1 0 0 4 0 TPR repeat-containing thioredoxin TTL1-like protein (AHRD V3.3 *-* A0A2K3PMP8_TRIPR) Solyc12g057000.1 154 172 313 328 293 243 239 175 201 187 296 165 283 254 330 VQ domain-containing protein (AHRD V3.3 *-* A0A1Q3AUB2_CEPFO) Solyc12g057010.3 0 2 0 0 1 3 5 2 3 2 2 4 12 1 0 Major facilitator superfamily (AHRD V3.3 *** A0A200QUR2_9MAGN) Solyc12g057020.2 0 0 1 3 1 1 1 0 2 0 0 0 0 0 0 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) AT3G53010 Solyc12g057030.2 58 78 48 47 37 39 39 25 41 37 69 34 71 41 36 signal peptidase complex-like protein DTM1 (AHRD V3.3 *** A0A2I4DI67_9ROSI) AT1G34640 Solyc12g057040.2 1026 672 288 440 306 298 309 267 516 608 413 312 550 441 310 cryptochrome 1b Solyc12g057050.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NOD26-like intrinsic protein 3.2 Solyc12g057060.2 17 39 65 55 48 58 45 58 248 157 133 180 54 60 36 Glycosyltransferase (AHRD V3.3 *** A0A2G3CNS7_CAPCH) AT1G22380 Solyc12g057070.2 0 0 1 0 0 0 0 0 2 1 1 0 0 0 3 Glycosyltransferase (AHRD V3.3 *** A0A2G3CNS7_CAPCH) AT1G22380 Solyc12g057080.2 4 15 18 16 14 13 9 6 50 49 133 21 8 4 1 Glycosyltransferase (AHRD V3.3 *** A0A2G3CNS7_CAPCH) AT1G22380 Solyc12g057090.1 54 10 15 106 1 2 7 0 2 7 4 2 24 14 10 purine permease 3-like (AHRD V3.3 *** A0A1U7V949_NICSY) Solyc12g057100.2 5 23 13 49 7 5 0 0 24 5 11 16 10 10 0 purine permease 3-like (AHRD V3.3 *** A0A1U7V949_NICSY),Pfam:PF16913 Solyc12g057110.2 1209 1877 1635 1873 2354 2312 2520 1971 1487 1451 1749 1483 1822 1519 1306 14-3-3 protein (AHRD V3.3 *** P93786_SOLTU) AT1G78300 Solyc12g057120.3 602 458 322 393 370 257 324 392 467 433 305 332 352 348 501 Cytochrome c oxidase subunit (AHRD V3.3 *** B6SN47_MAIZE) AT1G22450 Solyc12g057130.3 1 2 19 2 0 1 0 0 5 3 3 0 4 4 29 FAM91 carboxy-terminus protein (AHRD V3.3 *** AT1G35220.3) AT1G35220 Solyc12g057140.1 658 4383 2297 7041 5102 3740 4510 4925 1893 2922 3286 3183 809 1486 1955 Unknown protein Solyc12g057150.1 3 0 0 2 6 0 2 0 0 0 0 0 3 0 0 Unknown protein Solyc12g057160.1 307 644 1060 590 699 640 778 794 267 295 1251 520 324 308 350 Unknown protein Solyc12g087790.1 21 18 8 14 24 17 8 14 15 11 13 11 40 16 4 Unknown protein Solyc12g087810.3 563 317 449 316 281 347 308 214 301 234 375 283 256 315 387 K-box region and MADS-box transcription factor family protein (AHRD V3.3 *-* A0A2U1PLS4_ARTAN) AT5G65060 Solyc12g087820.1 198 169 112 90 129 85 99 138 140 166 89 114 134 103 74 MADS box transcription factor AGAMOUS (AHRD V3.3 *-* A0A1Q1NK16_PAELC) AT2G26320 Solyc12g087830.2 2001 1350 1905 1409 1283 1679 1577 1081 1531 1143 2276 1235 1877 1589 1871 MADS-box transcription factor (AHRD V3.3 *** F1T119_9ERIC) AT5G65060 Solyc12g087840.1 404 154 46 108 37 16 28 23 61 135 76 35 83 65 61 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LC40_ARTAN) AT1G72220 Solyc12g087850.3 66 17 1 14 0 0 1 0 6 12 7 1 20 4 29 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1PAJ2_ARTAN) Solyc12g087860.3 36 11 35 98 1 4 3 3 13 32 5 4 9 48 73 RING/U-box superfamily protein (AHRD V3.3 *** A0A2H1ZED7_ARATH) AT2G35000 Solyc12g087870.2 198 151 135 168 7 24 10 12 56 120 34 40 238 136 313 purine permease 3-like (AHRD V3.3 *** A0A1U8F0C1_CAPAN),Pfam:PF16913 AT1G28220 Solyc12g087890.3 977 1278 1759 1467 1682 1935 1849 1512 1900 1076 1359 1187 1143 1538 1853 transcription factor bHLH143-like (AHRD V3.3 *** A0A2I4FQB9_9ROSI) AT5G09460 Solyc12g087895.1 278 290 281 343 311 388 384 394 441 282 209 337 237 333 296 Myc-type, basic helix-loop-helix (BHLH) domain-containing protein (AHRD V3.3 *-* A0A2U1NNA1_ARTAN) Solyc12g087900.2 0 0 0 0 1 0 1 0 0 6 1 0 0 0 0 cyclinD2_1 AT2G22490 Solyc12g087910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cysteine-rich receptor-like protein kinase 25 (AHRD V3.3 *** A0A2G3B3U0_CAPCH) Solyc12g087920.2 14 1 0 0 0 0 0 0 1 9 1 0 0 6 1 Cysteine-rich receptor-like protein kinase (AHRD V3.3 *** A0A2K3PJ36_TRIPR) Solyc12g087930.1 0 4 0 0 0 0 0 0 0 0 2 0 0 0 0 BnaA09g14940D protein (AHRD V3.3 *** A0A078HPZ8_BRANA) AT1G58120 Solyc12g087940.2 2184 8761 5295 8713 24466 16775 18300 22426 8975 9849 5561 7399 6762 6411 2675 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** F4K5B9_ARATH) AT1G09750 Solyc12g087950.1 268 407 1351 504 409 311 324 342 529 760 1958 194 419 313 680 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A1U8GD78_CAPAN) Solyc12g087960.2 277 128 307 181 116 148 139 123 127 272 162 109 101 111 187 hypothetical protein (AHRD V3.3 *-* AT4G38060.4) AT5G65480 Solyc12g087970.2 1011 1087 1270 1238 1305 1344 1418 1238 1039 1053 1326 1259 1190 1190 1307 Homeodomain-like superfamily protein (AHRD V3.3 *-* AT1G09710.4) AT1G09710 Solyc12g087980.3 87 50 87 68 24 9 11 5 40 60 45 27 25 42 36 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2U1KHQ7_ARTAN) AT4G24510 Solyc12g087990.3 471 476 429 412 503 436 379 464 415 385 420 410 607 543 447 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* AT4G24500.3) AT4G24500 Solyc12g088000.2 1 0 0 0 0 0 0 0 0 1 0 0 3 0 0 Tyrosine aminotransferase (AHRD V3.3 *** A0A2G2VLJ4_CAPBA) Solyc12g088005.1 6 4 9 4 8 6 8 2 4 0 6 8 2 5 0 Unknown protein Solyc12g088010.2 99 57 50 52 141 122 120 88 58 43 81 82 76 65 68 HYPERSENSITIVE TO PI STARVATION 4 (AHRD V3.3 *** F4I9T6_ARATH) AT1G58250 Solyc12g088020.1 286 367 282 296 354 291 337 351 349 324 339 352 354 362 212 Farnesylcysteine lyase (AHRD V3.3 *** A0A2G2VLI9_CAPBA) AT5G63910 Solyc12g088030.2 642 786 835 829 879 953 1005 596 610 639 913 637 834 794 879 Transcription initiation factor IIA subunit 2 (AHRD V3.3 *** A0A1U8EUC5_CAPAN) AT4G24440 Solyc12g088040.2 525 290 126 251 204 224 160 228 352 373 170 350 178 171 84 Wall-associated receptor kinase-like 20 (AHRD V3.3 *** A0A2G2Y9C2_CAPAN) Solyc12g088050.2 1429 1092 1484 1535 780 957 980 734 1685 1312 1952 1133 971 1219 1146 Rhamnogalacturonate lyase (AHRD V3.3 *** A0A200QXQ6_9MAGN) Solyc12g088060.2 37 5 21 23 15 9 7 10 27 55 55 24 46 15 9 TRAF-type zinc finger domain-containing protein 1 (AHRD V3.3 *-* A0A1J3IY71_NOCCA) Solyc12g088070.2 93 120 122 110 97 113 100 106 134 108 109 102 164 109 81 TRAF-type zinc finger domain-containing protein 1 (AHRD V3.3 *** A0A1J3IY71_NOCCA) AT1G09920 Solyc12g088090.3 4 0 6 12 0 0 0 5 1 3 2 6 0 12 13 MADS-box transcription factor 27 (AHRD V3.3 *-* A0A2G2VLJ7_CAPBA) Solyc12g088110.3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 Oligopeptide transporter (AHRD V3.3 *** A0A200QXN4_9MAGN) Solyc12g088120.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g088130.3 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *-* A0A2U1PS36_ARTAN) AT5G65640 Solyc12g088140.2 45 34 39 107 0 0 1 1 36 50 109 18 39 64 115 Hydroxyproline-rich glycoprotein (AHRD V3.3 *** A0A2K3L507_TRIPR) Solyc12g088160.3 0 2 2 7 1 4 0 7 2 5 9 2 3 2 0 Phosphoenolpyruvate carboxykinase (AHRD V3.3 *** Q8W505_SOLLC) AT4G37870 Solyc12g088170.2 176 966 511 309 415 379 467 557 1795 582 185 1548 2221 1162 1176 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc12g088180.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 Tubulin alpha chain (AHRD V3.3 *-* A0A2G2V8B9_CAPBA) Solyc12g088190.2 175 198 38 73 4 3 10 4 26 117 23 36 475 144 145 Amino acid permease (AHRD V3.3 *** A0A2K3NUE8_TRIPR) Solyc12g088195.1 80 52 16 64 51 23 29 38 31 69 23 47 19 36 20 Unknown protein Solyc12g088200.3 912 367 740 738 408 449 400 321 303 519 617 351 457 488 1173 Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** A0A2G2Y9E6_CAPAN) AT4G08170 Solyc12g088210.3 490 484 579 542 483 526 554 574 689 562 618 518 507 477 688 Endo-1,4-beta-xylanase 1 (AHRD V3.3 *** XYN1_ARATH) AT1G58370 Solyc12g088220.2 648 415 379 711 133 190 155 163 405 538 617 388 241 492 759 SlBCAT1 AT1G10070 Solyc12g088230.3 2077 1203 1606 1878 781 829 907 659 754 1554 2367 908 1177 1172 1881 mitochondrial malate dehydrogenase AT1G10090 Solyc12g088240.2 0 3 3 0 8 2 2 2 6 2 1 1 0 1 0 Glycosyltransferase (AHRD V3.3 *** W8Q306_ARATH) AT4G07960 Solyc12g088250.2 334 187 71 190 129 85 76 51 79 159 131 47 162 102 572 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3MSK4_TRIPR) AT2G23000 Solyc12g088260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3NE54_TRIPR) Solyc12g088270.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine carboxypeptidase (AHRD V3.3 *-* A0A2K3L3N4_TRIPR) Solyc12g088280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Serine carboxypeptidase (AHRD V3.3 *** A0A2K3NF14_TRIPR) Solyc12g088290.2 4544 4100 3492 3510 3573 3978 3741 3557 2719 3175 2944 3698 3501 3936 2963 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1M3L2_ARTAN) AT4G07410 Solyc12g088300.2 17 22 10 10 25 6 5 11 17 12 18 12 23 30 23 hypothetical protein (AHRD V3.3 -** AT4G33800.2) Solyc12g088310.3 266 282 367 361 410 608 528 470 431 202 539 494 260 383 593 Unknown protein Solyc12g088320.2 92 209 193 230 191 149 205 171 227 120 153 148 108 130 235 LIM domain-containing protein (AHRD V3.3 *** A0A1Q3ALK2_CEPFO) AT1G10200 Solyc12g088330.1 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 ZCF37 (AHRD V3.3 *** A0A2U1NT51_ARTAN) AT1G59590 Solyc12g088340.2 2080 1172 1255 1270 1477 1710 1496 1336 1207 1422 1254 1314 833 1145 1352 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1Q4X4_ARTAN) AT1G27840 Solyc12g088360.2 278 109 91 36 58 41 27 28 80 133 159 53 95 45 105 RING-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2I4H694_9ROSI) AT3G01400 Solyc12g088370.2 430 407 339 318 297 290 329 241 290 341 271 312 565 314 289 Interferon-related developmental regulator (AHRD V3.3 *** A0A200QG19_9MAGN) AT1G27760 Solyc12g088380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor bHLH84 (AHRD V3.3 *** A0A2G3B3S2_CAPCH) Solyc12g088390.1 15 10 12 4 1 2 2 5 10 8 13 3 3 4 0 Zinc-finger protein (AHRD V3.3 *** Q40899_PETHY) Solyc12g088400.1 140 63 38 5 5 3 4 0 9 8 58 3 29 13 73 Zinc-finger protein (AHRD V3.3 *-* Q40899_PETHY) Solyc12g088410.3 76 51 121 78 55 81 66 68 51 89 50 92 64 58 61 Glycosyl hydrolase family 35 protein (AHRD V3.3 *-* AT5G01075.1) Solyc12g088420.2 110 158 191 171 111 144 140 91 148 100 283 106 195 188 101 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *** A0A2U1NNX3_ARTAN) AT5G43140 Solyc12g088440.2 324 371 323 419 287 340 319 256 339 394 463 304 337 307 367 Syntaxin/t-SNARE family protein (AHRD V3.3 *** A0A2U1LKM2_ARTAN) AT1G27700 Solyc12g088450.3 249 201 143 169 94 133 148 119 137 131 122 101 177 161 128 C5orf35 (AHRD V3.3 *** AT5G23200.1) AT5G23200 Solyc12g088460.3 169 111 75 101 60 45 49 52 87 86 59 60 89 99 111 Cytochrome P450 (AHRD V3.3 *** A0A200Q0W8_9MAGN) Solyc12g088470.3 3 56 66 68 104 105 90 102 42 16 23 52 22 59 21 cyclin A3_4 AT1G47210 Solyc12g088480.2 473 448 451 353 377 386 462 432 324 305 418 351 287 371 391 Zinc-finger domain of monoamine-oxidase A repressor R1 (AHRD V3.3 *** A0A2U1Q872_ARTAN) AT4G37110 Solyc12g088490.1 0 13 12 19 18 12 31 12 6 3 1 4 3 24 0 VQ motif-containing protein 31 (AHRD V3.3 *** A0A2I4FNY9_9ROSI) AT5G08480 Solyc12g088500.2 10 72 57 72 88 93 149 80 55 25 43 48 28 53 22 cyclin A3_5 AT1G47210 Solyc12g088510.1 16 4 6 1 1 5 3 1 3 5 27 7 13 12 11 Cytochrome P450 (AHRD V3.3 *** A0A200Q0W8_9MAGN) Solyc12g088520.2 5 83 68 62 126 126 147 106 81 33 84 72 27 86 50 cyclin A3_3 AT1G47210 Solyc12g088530.2 18 378 329 413 497 545 681 518 363 285 284 516 188 423 234 cyclin A3.1 AT1G47210 Solyc12g088540.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD40 repeat (AHRD V3.3 *** A0A200QZN3_9MAGN) Solyc12g088570.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD40 repeat (AHRD V3.3 *-* A0A200QZN3_9MAGN) Solyc12g088610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MYB-RELATED transcription factor (AHRD V3.3 *-* F1DJU8_MAIZE) Solyc12g088620.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WD40 repeat (AHRD V3.3 *** A0A200QZN3_9MAGN) Solyc12g088630.2 0 0 9 1 0 0 0 0 0 0 0 1 2 0 0 WD40 repeat (AHRD V3.3 *** A0A200QZN3_9MAGN) Solyc12g088640.2 9 2 3 9 0 4 4 1 2 2 0 7 4 19 20 Carbohydrate esterase, putative (DUF303) (AHRD V3.3 *** Q0WNN6_ARATH) Solyc12g088650.2 349 769 1203 1035 1828 1930 1700 1363 769 503 916 1048 837 1259 791 cyclinD3_2 Solyc12g088660.2 490 566 443 482 469 559 571 484 485 562 418 424 652 585 407 Mannose-P-dolichol utilization defect 1 protein (AHRD V3.3 *** A0A2U1MUU7_ARTAN) AT4G07390 Solyc12g088665.1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) Solyc12g088670.2 17945 8664 7388 8016 5135 5322 5501 5432 9392 12849 8981 8944 6749 8164 7572 cysteine protease CYP1 Solyc12g088680.2 108 85 220 90 99 102 81 102 77 98 101 81 181 121 74 Ubiquitin-conjugating enzyme (AHRD V3.3 *** B3TLZ3_ELAGV) Solyc12g088690.2 3 7 9 35 17 28 26 18 20 7 34 12 7 2 43 Glycosyltransferase (AHRD V3.3 *** A0A2U1PZD4_ARTAN) Solyc12g088700.1 23 42 57 58 83 83 121 70 96 22 102 39 18 41 105 Glycosyltransferase (AHRD V3.3 *** A0A2U1PZD4_ARTAN) Solyc12g088710.1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 2 Glycosyltransferase (AHRD V3.3 *** A0A2U1LFV6_ARTAN) Solyc12g088720.2 23327 29932 21834 21273 25110 26258 26848 26081 18555 20665 18287 22899 29411 28160 22134 Polyadenylate-binding protein (AHRD V3.3 *** A0A2G3B416_CAPCH) AT1G49760 Solyc12g088730.2 494 673 694 691 597 508 605 554 496 407 557 484 832 798 564 50S ribosomal protein L4 (AHRD V3.3 *** Q8LE97_ARATH) AT2G20060 Solyc12g088740.2 840 776 1002 759 1026 1069 1174 1025 1060 764 1044 827 722 908 802 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1PN10_ARTAN) AT5G42940 Solyc12g088750.2 786 959 1049 761 943 902 774 867 1321 1000 1110 1072 761 850 745 Protein kinase domain (AHRD V3.3 *** A0A200QZD6_9MAGN) AT4G02630 Solyc12g088760.1 93 172 179 191 84 79 58 72 186 136 116 132 217 110 180 Subtilisin-like protease preproenzyme (AHRD V3.3 *** C7E4J6_TOBAC) AT5G67090 Solyc12g088770.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Subtilisin-like protease preproenzyme (AHRD V3.3 *-* C7E4J6_TOBAC) Solyc12g088780.1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Subtilisin-like protease preproenzyme (AHRD V3.3 *-* C7E4J6_TOBAC),Pfam:PF17766 Solyc12g088790.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 bHLH transcription factor159 Solyc12g088800.3 0 0 1 8 0 1 4 2 3 1 6 0 1 0 10 Lipase (AHRD V3.3 *** A0A1J3EVR4_NOCCA) AT5G42930 Solyc12g088810.3 262 221 169 180 139 169 155 211 209 182 154 175 163 198 183 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (AHRD V3.3 *-* F4I6D1_ARATH) AT1G45231 Solyc12g088820.2 9 11 62 22 9 11 10 12 29 8 17 6 10 4 18 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G3B403_CAPCH) AT5G09890 Solyc12g088830.3 128 97 131 120 26 40 34 22 29 16 30 15 100 87 345 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (AHRD V3.3 *** A0A1U8F3P2_CAPAN) AT2G26570 Solyc12g088840.1 515 155 233 504 24 20 10 6 146 238 222 54 448 251 703 EF-hand domain (AHRD V3.3 *** A0A200QZB4_9MAGN) Solyc12g088850.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EF-hand domain (AHRD V3.3 *** A0A200QZ93_9MAGN) Solyc12g088860.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 EF-hand domain (AHRD V3.3 *** A0A200QZ93_9MAGN) Solyc12g088870.1 3 0 0 1 1 0 0 1 0 0 0 0 0 1 5 Unknown protein Solyc12g088880.2 359 377 422 401 524 469 489 477 353 345 334 381 408 341 362 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q9SZB3_ARATH) AT4G33360 Solyc12g088890.3 41 44 87 32 74 40 71 48 55 47 113 37 78 69 84 DnaJ protein like (AHRD V3.3 *** A0A2I0VSC0_9ASPA) Solyc12g088900.2 413 585 478 529 490 497 445 468 487 531 500 463 701 611 513 Succinate dehydrogenase subunit 5, mitochondrial (AHRD V3.3 *** A0A2G2VHS1_CAPBA) AT1G47420 Solyc12g088910.3 44 49 204 104 16 14 13 3 68 79 287 25 96 73 153 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8B1U2_ARATH) Solyc12g088920.2 537 364 454 363 327 389 338 320 368 428 323 369 318 403 456 Calcineurin-like metallo-phosphoesterase superfamily protein (AHRD V3.3 *** F4JPS4_ARATH) AT4G23000 Solyc12g088930.1 106 159 141 252 49 68 40 51 201 214 247 64 125 159 189 protein MIZU-KUSSEI 1-like (AHRD V3.3 *** A0A2I4GRW5_9ROSI) AT5G42680 Solyc12g088940.3 1154 679 1443 580 243 332 219 260 344 698 779 383 679 615 611 MAP kinase kinase kinase 87 Solyc12g088950.3 0 0 0 0 0 1 0 1 1 0 1 0 1 1 0 Leucine-rich repeat family protein (AHRD V3.3 *-* A0A061GNA0_THECC) Solyc12g088960.2 577 997 793 851 943 979 1030 863 612 660 768 780 1085 1080 876 Unknown protein Solyc12g088970.1 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 Cytochrome P450 (AHRD V3.3 *-* A0A200QY67_9MAGN) AT4G31940 Solyc12g088980.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1PM75_ARTAN) AT2G26490 Solyc12g088990.2 1383 1464 1265 1323 1390 1387 1604 1530 1551 1203 1220 1325 1597 1546 1610 Exocyst complex component SEC3A (AHRD V3.3 *** A0A2G2VHQ3_CAPBA) AT1G47550 Solyc12g089000.2 435 320 341 352 260 290 236 251 389 320 244 265 533 456 368 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8EVL3_CAPAN) Solyc12g089010.3 52 124 62 78 110 61 70 80 73 88 26 93 48 68 47 ATP-dependent RNA helicase (AHRD V3.3 *** A0A1Y1IA80_KLENI) Solyc12g089020.2 16 2 0 0 0 0 0 0 0 3 0 1 4 6 2 Protein kinase domain (AHRD V3.3 *** A0A200R7I5_9MAGN) Solyc12g089030.2 337 399 608 537 591 596 603 558 494 358 463 459 498 518 492 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200R7K5_9MAGN) AT4G36800 Solyc12g089040.3 6048 5956 6632 8517 8665 8215 8463 8682 5157 8832 8119 7638 5026 5592 5666 mature anther-specific protein LAT61 AT1G75080 Solyc12g089050.3 49 76 68 103 51 87 73 72 85 84 103 113 53 84 69 MBOAT (Membrane bound O-acyl transferase) family protein (AHRD V3.3 *** A0A2U1NVV0_ARTAN) Solyc12g089060.2 645 471 471 420 569 449 525 405 488 433 401 350 616 444 583 PPPDE putative thiol peptidase family protein (AHRD V3.3 *** Q8RXP3_ARATH) AT1G47740 Solyc12g089070.1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 Ubiquitin (AHRD V3.3 *** A0A2U1KZS9_ARTAN) AT2G32360 Solyc12g089080.3 9 3 7 10 2 1 3 2 2 6 1 5 6 4 18 Glycosyltransferase (AHRD V3.3 *** A0A1U8ESK2_CAPAN) Solyc12g089090.2 2015 1430 1614 1511 1027 1220 1137 1015 924 1259 1305 1103 1632 1365 1483 Protein phosphatase 2C family protein (AHRD V3.3 *** A0A2U1NN53_ARTAN) AT4G16580 Solyc12g089100.2 170 296 318 306 309 269 299 304 245 238 311 305 431 307 166 Outer envelope pore protein 24A, chloroplastic (AHRD V3.3 *** A0A2G3B427_CAPCH) Solyc12g089110.1 2024 1289 2530 2222 1329 1832 2356 758 1607 1572 3635 1691 1142 1778 3664 Unknown protein Solyc12g089130.2 92 55 22 40 28 14 22 20 29 68 38 16 51 63 66 Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** Q9FRK8_ARATH) AT1G75170 Solyc12g089140.2 853 320 582 644 465 572 533 401 416 716 642 715 272 472 518 Erythronate-4-phosphate dehydrogenase family protein (AHRD V3.3 *** Q8VYC6_ARATH) AT1G75180 Solyc12g089145.1 26 5 1 12 5 4 3 3 4 18 3 3 10 13 5 Unknown protein Solyc12g089150.2 661 521 488 473 356 413 435 383 507 535 572 464 617 541 549 Syntaxin-61 (AHRD V3.3 *** A0A1U8F703_CAPAN) AT1G28490 Solyc12g089160.3 952 597 1446 935 228 293 313 217 1171 624 2836 532 549 763 1616 Protein kinase domain (AHRD V3.3 *** A0A200R7P3_9MAGN) Solyc12g089170.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Transcription factor RADIALIS (AHRD V3.3 *** A0A2G2Y9U7_CAPAN) Solyc12g089180.2 378 270 171 267 177 177 223 202 241 221 149 202 189 192 232 Sugar facilitator protein 6 AT1G75220 Solyc12g089190.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Protein RADIALIS-like 6 (AHRD V3.3 *** A0A1U8ERP9_CAPAN) Solyc12g089200.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *-* S8D6T4_9LAMI) Solyc12g089205.1 87 42 49 42 28 48 37 30 26 35 55 30 28 27 55 Proteasome subunit alpha type (AHRD V3.3 *-* A0A2U1NXP5_ARTAN) Solyc12g089210.2 343 361 247 315 499 472 493 674 444 456 261 356 318 384 197 Ornithine carbamoyltransferase (AHRD V3.3 *** A0A2G2YA09_CAPAN) AT1G75330 Solyc12g089220.3 310 99 102 131 21 41 33 27 99 155 131 111 97 174 238 Bifunctional nuclease 2 (AHRD V3.3 *** A0A2G2Y9Z2_CAPAN) Solyc12g089230.2 21 24 27 29 15 38 29 30 24 17 52 40 15 14 22 Major facilitator superfamily domain, general substrate transporter (AHRD V3.3 *** A0A2U1MUA0_ARTAN) Solyc12g089240.2 553 95 137 128 9 36 16 6 131 149 350 279 51 189 313 B-box zinc finger protein 22 (AHRD V3.3 *** A0A1U8F0C2_CAPAN) AT1G75540 Solyc12g089250.1 8 12 6 19 26 54 35 46 5 10 6 12 9 11 23 Glyoxal oxidase-related protein (AHRD V3.3 *** A0A2U1MRW9_ARTAN) AT1G75620 Solyc12g089260.3 993 1087 860 929 1020 1035 939 863 727 841 771 864 943 1026 815 Zinc finger transcription factor 80 AT1G19860 Solyc12g089270.1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 Auxin responsive SAUR protein (AHRD V3.3 *** A0A2U1P3N8_ARTAN) AT1G75590 Solyc12g089280.2 1736 2098 1649 1641 1476 1576 1711 1816 1566 1116 1376 1403 2447 2256 1753 5'-3' exoribonuclease (AHRD V3.3 *** A0A2G2VHX4_CAPBA) AT1G75660 Solyc12g089290.3 69 199 175 150 200 249 201 214 186 141 259 202 127 200 185 HVA22-like protein (AHRD V3.3 *-* A0A2G2YA04_CAPAN) Solyc12g150128.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g150129.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g150130.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g089300.2 9 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Gibberellin regulated protein (AHRD V3.3 *** A0A200QKC0_9MAGN) Solyc12g089310.2 0 0 4 9 66 41 21 49 5 16 2 13 0 5 3 Tubulin beta chain (AHRD V3.3 *** A0A2G3CQF5_CAPCH) Solyc12g089320.3 1392 1204 952 1003 811 916 880 984 1097 1145 939 1042 1166 1108 990 Transcription factor IIS (AHRD V3.3 *-* A0A200RA68_9MAGN) AT4G24200 Solyc12g089330.2 0 3 4 4 0 0 0 0 5 2 0 0 11 0 32 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A1P8BD17_ARATH) Solyc12g089340.2 1152 1022 1292 1239 1085 1313 1236 955 1153 976 1532 1148 958 1135 1631 Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** A0A2G2VHW8_CAPBA) AT1G75850 Solyc12g089350.3 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 GDSL esterase/lipase (AHRD V3.3 *** A0A2R6PZH9_ACTCH) AT1G75900 Solyc12g089360.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4DH07_SOLLC) AT5G42180 Solyc12g089370.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Peroxidase (AHRD V3.3 *** K4DH08_SOLLC) AT5G42180 Solyc12g089380.2 1 0 11 8 21 28 23 13 7 1 5 9 0 12 12 expansin 8 AT1G20190 Solyc12g089385.1 86 49 125 120 22 5 10 7 11 28 28 5 203 76 33 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A2U1M9H9_ARTAN) AT4G38540 Solyc12g094380.2 511 161 255 281 48 52 45 28 145 294 305 35 299 206 472 Thioredoxin superfamily protein (AHRD V3.3 *** A0A2U1PXF3_ARTAN) AT1G76020 Solyc12g094385.1 150 77 29 53 45 27 24 21 18 57 6 15 38 80 191 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1PXB9_ARTAN) AT5G42200 Solyc12g094390.1 126 42 25 41 2 2 4 4 40 18 76 12 29 57 76 Syringolide-induced protein 14-1-1 (AHRD V3.3 *** A0A2K3M7L2_TRIPR) AT1G76070 Solyc12g094400.2 19 1 31 42 0 2 1 0 9 7 14 2 8 10 19 Major facilitator superfamily (AHRD V3.3 *** A0A2U1P5G0_ARTAN) AT2G16980 Solyc12g094410.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 MAP kinase kinase kinase 88 Solyc12g094420.2 419 250 374 311 266 345 306 264 280 242 329 282 203 332 369 Mechanosensitive ion channel protein (AHRD V3.3 *** A0A2G3DGW3_CAPCH) Solyc12g094430.1 393 404 516 553 489 598 533 505 547 450 759 522 360 465 600 Glutathione S-transferase (AHRD V3.3 *** A0A200QZS2_9MAGN) Solyc12g094435.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g094440.2 22 98 248 168 166 262 172 250 144 66 114 213 61 196 100 High mobility group B protein 9 (AHRD V3.3 *** A0A2G2YA23_CAPAN) AT1G76110 Solyc12g094450.3 350 327 265 304 118 117 130 137 287 364 247 249 315 307 326 Enoyl-CoA hydratase 2, peroxisomal (AHRD V3.3 *** A0A2G2V0C5_CAPBA) AT1G76150 Solyc12g094460.2 0 55 21 40 7 7 10 16 10 14 39 6 14 17 82 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A2G2YA38_CAPAN) Solyc12g094470.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 L-ascorbate oxidase-like protein (AHRD V3.3 *** A0A2G2VIC9_CAPBA) Solyc12g094480.3 111 192 223 246 245 280 348 238 178 173 142 200 227 205 272 hypothetical protein (AHRD V3.3 *** AT1G20430.1) AT1G20430 Solyc12g094490.2 5825 3204 2230 3077 2084 2178 2127 2211 2311 4989 2742 3374 2042 2648 2655 Polyadenylation and cleavage factor-like protein 4 (AHRD V3.3 *** A0A2G2VIC5_CAPBA) AT4G04885 Solyc12g094500.3 375 529 740 644 623 646 685 659 791 620 570 700 629 564 472 Alcohol dehydrogenase-like 7 (AHRD V3.3 *** A0A2G3B4K6_CAPCH) AT5G42250 Solyc12g094510.2 320 162 199 211 143 174 237 122 119 144 251 143 165 223 299 NADH-ubiquinone oxidoreductase chain (AHRD V3.3 *** AT1G20460.1) AT1G20460 Solyc12g094520.2 869 1448 1846 1052 1299 1022 1118 1195 1313 1658 1194 1075 1495 1164 1097 4-coumarate--CoA ligase-like 4 (AHRD V3.3 *** A0A2G3B4I9_CAPCH) AT1G20510 Solyc12g094530.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF241 domain protein%2C putative (DUF241) (AHRD V3.3 *** AT1G76210.1) AT1G76210 Solyc12g094540.1 623 626 719 502 487 491 438 454 416 595 743 584 857 599 672 Werner Syndrome-like exonuclease (AHRD V3.3 *** A0A2I4H4A1_9ROSI) AT3G12440 Solyc12g094550.2 612 421 381 469 271 326 314 259 413 405 449 389 494 518 445 At1g76250 (AHRD V3.3 *** Q8GX25_ARATH) AT1G76250 Solyc12g094560.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *** A0A1B1LUK2_VITPS) Solyc12g094570.1 323 165 81 117 185 166 190 161 100 186 99 105 52 114 71 inactive purple acid phosphatase-like protein (AHRD V3.3 *-* AT1G42430.2) Solyc12g094580.3 158 91 24 42 113 93 82 136 62 103 39 92 41 42 43 inactive purple acid phosphatase-like protein (AHRD V3.3 *-* AT1G42430.1) Solyc12g094590.2 586 498 527 501 482 536 460 415 397 452 455 426 513 481 501 O-fucosyltransferase (AHRD V3.3 *** A0A2P5EY47_TREOI) AT1G76270 Solyc12g094600.3 2 10 20 14 30 24 24 26 12 5 6 18 0 3 0 cyclinB2_5 AT1G76310 Solyc12g094610.3 0 7 1 0 0 0 0 1 0 0 0 0 0 0 0 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8F899_CAPAN) Solyc12g094620.3 21967 16218 9486 18696 7904 8038 8634 9901 14749 21541 7370 13826 17793 17891 21085 catalase Solyc12g094630.2 658 447 542 504 460 402 406 416 703 685 624 690 383 440 634 Low-density receptor-like protein (AHRD V3.3 *** Q8H0X5_ARATH) AT1G42960 Solyc12g094640.3 63 177 152 87 76 67 45 42 103 51 130 54 54 43 393 Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** A0A2G2YA75_CAPAN) Solyc12g094650.3 1697 800 1504 709 92 112 181 110 544 1084 1486 205 1373 902 953 Transmembrane protein, putative (DUF594) (AHRD V3.3 *-* Q9FHI2_ARATH) AT5G45540 Solyc12g094660.2 1176 1321 1117 898 938 984 1013 996 1071 1570 1091 1045 1781 979 907 Disease resistance protein (AHRD V3.3 *** A0A2U1Q8K0_ARTAN) Solyc12g094670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 C3H4 type zinc finger protein (DUF23) (AHRD V3.3 *** Q9FM26_ARATH) AT4G37420 Solyc12g094680.3 0 0 0 0 13 0 0 0 0 0 7 0 0 0 0 Protein kinase (AHRD V3.3 *** S8D6E4_9LAMI) AT1G20650 Solyc12g094690.1 14 65 17 87 94 80 67 72 58 46 50 42 80 44 62 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN) AT1G20823 Solyc12g094700.3 7 77 40 69 96 114 118 58 21 48 47 46 3 35 120 Xylem cysteine proteinase 1 (AHRD V3.3 *** A0A2G3B4G3_CAPCH) AT4G35350 Solyc12g094710.2 1309 1847 1215 1378 1806 1652 1853 1898 1660 1326 1035 1594 1776 1529 1276 AT-hook motif nuclear-localized protein 10 (AHRD V3.3 *-* A0A2G3B4F7_CAPCH) AT2G33620 Solyc12g094720.3 60 129 90 54 83 116 110 77 57 59 56 77 66 58 51 PsbP family (AHRD V3.3 *** A0A2U1P1U5_ARTAN) AT1G76450 Solyc12g094740.3 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 Unknown protein Solyc12g095740.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ARID/BRIGHT DNA binding domain containing protein (AHRD V3.3 *-* B2CZF7_LOTJA) Solyc12g095750.2 7 33 51 35 58 66 45 60 102 30 4 45 48 17 37 Auxin efflux carrier (AHRD V3.3 *** A0A200PR79_9MAGN) AT1G20925 Solyc12g095760.2 5062 11923 10978 14500 16117 14709 15166 13393 9637 7878 9209 11872 15223 14874 14097 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha (AHRD V3.3 *** A0A2G3B4E8_CAPCH) AT1G76550 Solyc12g095770.2 1078 1056 1190 1087 1279 1195 1165 1151 942 1122 1039 985 1137 975 1088 Secondary thiamine-phosphate synthase enzyme (AHRD V3.3 *** Q9LPU1_ARATH) AT1G21065 Solyc12g095780.2 2873 3184 2650 3136 4431 3817 4034 4704 3094 3839 2521 3538 2705 2605 1925 Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** A0A1P8APU6_ARATH) AT1G76660 Solyc12g095790.2 342 1107 890 881 1233 1178 1308 1102 890 716 1116 694 911 824 701 UDP-galactose transporter 2 (AHRD V3.3 *** A0A1U8EY77_CAPAN) AT1G76670 Solyc12g095800.2 1599 1156 1362 1136 1467 1361 1499 1473 1100 1029 1213 1418 1182 1118 1319 Chaperone protein dnaJ 10 (AHRD V3.3 *** A0A2G2YA74_CAPAN) AT1G21080 Solyc12g095810.2 333 149 256 225 84 123 121 116 162 273 232 240 137 252 545 Protein NRT1/ PTR FAMILY 1.1 (AHRD V3.3 *** A0A2G3B4H5_CAPCH) Solyc12g095820.3 367 388 438 476 505 615 546 572 334 317 460 463 442 459 460 thioredoxin-related transmembrane protein 2 (AHRD V3.3 *** A0A2I4GNN1_9ROSI) AT5G11640 Solyc12g095830.3 6015 3448 2929 3108 2457 2488 2411 2531 2989 3016 3130 2545 3266 3261 3936 Casein kinase (AHRD V3.3 *** A0A1Y1HMY4_KLENI) AT2G25760 Solyc12g095840.2 280 273 186 223 320 211 231 251 274 223 128 179 269 243 125 ATP-dependent protease La (LON) domain protein (AHRD V3.3 *** A0A2U1QKH9_ARTAN) AT2G25740 Solyc12g095850.2 105 208 185 246 263 265 290 328 184 153 158 161 228 324 221 Tryptophan--tRNA ligase (AHRD V3.3 *** A0A2G2VHY5_CAPBA) AT2G25840 Solyc12g095860.2 1653 1423 1491 1534 1779 1422 1511 1389 1260 1675 1430 1444 1470 1232 1551 LEY17226 cyclin-dependent protein kinase 2A-2 AT3G48750 Solyc12g095870.3 31 199 255 302 517 450 411 437 230 114 162 222 46 104 91 Aurora kinase A-A (AHRD V3.3 *** A0A1U8F0D3_CAPAN) AT4G32830 Solyc12g095880.2 782 829 904 953 893 916 1022 939 1050 809 883 802 1058 1308 1085 ATP-dependent 6-phosphofructokinase (AHRD V3.3 *** A0A2G2VI14_CAPBA) AT4G26270 Solyc12g095890.2 1646 1031 1346 1187 940 1214 1371 898 1051 781 1453 862 915 1222 1787 Nuclear poly(A) polymerase 4 (AHRD V3.3 *** A0A2G2VI04_CAPBA) AT4G32850 Solyc12g095900.2 1862 826 841 916 598 692 597 633 931 947 1011 734 854 861 1375 protein EARLY FLOWERING 3 (AHRD V3.3 *** A0A2I4FS73_9ROSI) AT2G25930 Solyc12g095910.2 2139 1363 2564 2478 1740 1714 1855 2011 2372 2833 2648 2926 1982 2447 2825 cysteine protease AT4G32940 Solyc12g095920.2 4611 2329 1701 1839 2021 2041 1805 1813 1462 2097 2147 1856 1576 1600 1732 BRISC/BRCA1-A complex protein (AHRD V3.3 *-* F4JVV9_ARATH) AT4G32960 Solyc12g095930.2 1135 1350 865 732 1087 1095 972 1195 968 936 642 1038 1510 1366 870 Serine hydroxymethyltransferase (AHRD V3.3 *** A0A2G2VI47_CAPBA) AT4G32520 Solyc12g095940.1 154 234 223 146 217 164 118 174 141 132 213 138 289 235 191 stress response protein (AHRD V3.3 *-* AT5G11760.1) AT5G11760 Solyc12g095960.3 51988 39737 34670 34682 28524 31554 34845 30235 23559 33074 33543 31740 34656 34420 33742 RNA-binding KH domain protein (AHRD V3.3 *-* A0A2K3P1D4_TRIPR) AT2G25970 Solyc12g095950.1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g095970.3 3 1 4 0 0 4 1 0 1 0 0 7 1 0 0 Abscisic acid receptor PYL3 (AHRD V3.3 *** A0A1U8ETR1_CAPAN) AT2G26040 Solyc12g095980.2 224 853 570 947 1018 805 795 1109 655 814 708 719 776 639 471 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** A0A2U1MMJ0_ARTAN) AT5G11890 Solyc12g095990.2 7655 9080 5707 6201 6479 6394 5794 6946 5420 5977 4396 5688 9816 7701 6485 RNA helicase DEAD40 AT1G54270 Solyc12g096000.2 1799 3253 2417 2307 2944 2834 2805 3300 2403 2473 1868 2677 2914 2707 2190 RNA helicase DEAD41 AT1G54270 Solyc12g096010.3 123 219 264 217 332 310 349 256 212 181 236 287 177 177 263 Protein kinase family protein (AHRD V3.3 *** A0A1P8BD07_ARATH) AT5G12000 Solyc12g096020.3 1122 662 420 800 616 751 716 812 557 726 307 401 670 457 511 Protein phosphatase 2c (AHRD V3.3 *** F8WL78_CITUN) Solyc12g096030.1 344 219 269 199 186 211 222 150 149 158 174 180 284 268 383 Mitochondrial carrier protein (AHRD V3.3 *** F8WLA3_CITUN) AT1G72820 Solyc12g096040.3 536 1194 750 824 1548 1455 1354 1820 921 816 508 1197 767 910 371 PHD finger protein ALFIN-LIKE 4 (AHRD V3.3 *** A0A2G3B4A9_CAPCH) AT5G26210 Solyc12g096050.2 323 320 253 326 429 291 377 323 354 289 214 299 332 323 234 Protein ENHANCED DISEASE RESISTANCE 2-like (AHRD V3.3 *** A0A2G2YA33_CAPAN) AT4G19040 Solyc12g096060.2 346 484 370 457 520 401 368 463 415 407 267 363 392 457 359 MOB kinase activator family (AHRD V3.3 *** A0A2U1N847_ARTAN) AT5G45550 Solyc12g096070.2 2039 1775 1548 1457 1737 1968 1757 2054 1510 1563 1517 1755 1814 2019 1110 Growth-regulating factor 4 (AHRD V3.3 *** A0A2G3BQA5_CAPCH) Solyc12g096080.2 5 3 18 21 8 10 1 8 5 13 8 0 0 4 40 Glycosyltransferase (AHRD V3.3 *** A0A2U1QCQ5_ARTAN) Solyc12g096090.2 186 172 165 152 198 202 204 148 187 151 237 172 178 165 243 Cadmium-induced protein AS8 (AHRD V3.3 *** A0A2G2YAB2_CAPAN) AT4G19070 Solyc12g096100.2 167 226 263 462 453 674 519 348 300 195 470 429 168 309 393 Protein PAM68, chloroplastic (AHRD V3.3 *** A0A2G2YAA0_CAPAN) Solyc12g096105.1 37 13 21 30 28 23 12 12 20 40 25 70 3 11 41 Unknown protein Solyc12g096110.3 77 57 156 107 64 59 57 52 67 88 88 85 13 65 38 BREVIS RADIX AT1G31880 Solyc12g096120.2 318 335 626 421 357 325 361 336 450 343 418 300 323 377 485 Ubiquitin-fold modifier 1 (AHRD V3.3 *** A0A2G3B4L7_CAPCH) AT1G77710 Solyc12g096130.2 131 87 72 143 67 89 64 73 67 79 33 50 28 66 11 Unknown protein Solyc12g096140.3 942 1259 945 918 931 747 832 1039 737 925 886 1067 1446 1086 907 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VI49_CAPBA) AT4G38150 Solyc12g096145.1 12 3 0 6 5 7 3 11 4 3 16 7 1 1 0 Unknown protein Solyc12g096150.2 1617 5166 3066 2591 3882 3125 3736 3657 2839 1849 2260 2596 5272 4240 2903 60S ribosomal protein L13 (AHRD V3.3 *** A0A1U8GMG9_CAPAN) AT3G49010 Solyc12g096160.2 624 684 861 731 790 671 730 673 808 824 615 844 770 702 667 WAT1-related protein (AHRD V3.3 *** K4DH89_SOLLC) AT4G19185 Solyc12g096170.2 111 353 615 392 511 715 449 569 260 228 420 470 278 429 178 embryo defective 3006 (AHRD V3.3 *** AT4G19350.1) AT4G19350 Solyc12g096175.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A2I0WTR4_9ASPA) ATMG00810 Solyc12g096180.1 18 13 101 32 30 32 20 19 13 26 88 19 3 22 31 Late embryogenesis abundant protein (AHRD V3.3 *** Q9FH78_ARATH) AT5G45320 Solyc12g096190.2 1814 1594 1397 2086 1193 1484 1439 1581 2313 2351 1520 1734 3342 1984 1909 Tryptophan synthase beta chain (AHRD V3.3 *** Q9FFW8_ARATH) AT5G38530 Solyc12g096195.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g096200.2 4 0 0 0 0 0 0 0 0 0 0 0 0 3 1 R2R3MYB transcription factor 6 Solyc12g096210.2 63 43 3 27 6 9 11 8 12 22 32 2 22 30 27 Unknown protein Solyc12g096220.2 9914 14150 16052 11625 15137 16409 15853 14195 11126 8789 12605 10840 14634 13289 14224 Rop guanine nucleotide exchange factor 14 (AHRD V3.3 *** A0A2G2VI54_CAPBA) Solyc12g096230.2 277 210 106 145 160 137 165 119 122 159 181 187 206 234 172 Alkylated DNA repair protein alkB-like protein 8 (AHRD V3.3 *** A0A1J3CHH7_NOCCA) AT1G31600 Solyc12g096240.3 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 Tyrosine aminotransferase (AHRD V3.3 *** A0A2G2VI66_CAPBA) Solyc12g096250.2 184 651 294 475 714 630 594 826 449 212 299 448 157 562 172 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** A0A2K3L8P7_TRIPR) AT5G67150 Solyc12g096260.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ankyrin repeat (AHRD V3.3 *** A0A200R6W7_9MAGN) Solyc12g096270.2 473 360 309 351 272 288 285 272 333 370 364 272 293 340 328 guanine nucleotide-binding protein subunit gamma 2-like (AHRD V3.3 *** A0A2I4GP70_9ROSI) Solyc12g096280.2 103 108 71 146 108 127 98 115 105 95 90 149 118 145 96 Endonuclease V (AHRD V3.3 *** A0A2U1PD83_ARTAN) AT4G31150 Solyc12g096290.3 257 447 293 238 356 384 360 449 351 232 295 320 425 376 228 Exocyst complex component (AHRD V3.3 *** A0A2G3B4Z9_CAPCH) AT3G56640 Solyc12g096295.1 13 17 47 50 57 55 44 20 10 19 74 13 37 32 61 Unknown protein Solyc12g096300.2 3850 8513 5303 4568 6955 5569 5542 6393 5281 4199 4347 5256 8989 7382 5289 40S ribosomal protein S6 (AHRD V3.3 *** Q3HVK4_SOLTU) AT5G10360 Solyc12g096310.2 78 21 143 423 9 2 1 4 21 25 95 5 115 124 393 plant/protein (Protein of unknown function%2C DUF599) (AHRD V3.3 *** AT5G10580.4) AT4G31330 Solyc12g096320.2 108 242 338 409 636 665 572 564 409 307 517 425 180 248 296 Gamma-glutamylcyclotransferase (AHRD V3.3 *** A0A2G3B4Z7_CAPCH) AT5G26220 Solyc12g096330.3 213 144 189 148 143 193 163 130 131 112 255 147 133 129 237 Ribosomal RNA large subunit methyltransferase H (AHRD V3.3 *** A0A328X0K2_9FLAO) AT5G10620 Solyc12g096340.2 1251 657 933 928 581 654 759 456 558 691 705 487 622 690 914 UAA domain-containing protein (AHRD V3.3 *** A0A1Q3CCI8_CEPFO) AT4G31600 Solyc12g096350.2 190 267 520 159 128 149 122 147 148 269 232 209 360 197 131 WRKY transcription factor 10 Solyc12g096370.2 374 303 432 330 288 349 353 330 408 309 311 259 300 351 239 Exocyst subunit Exo70 family protein (AHRD V3.3 *** A0A2G3B4Y0_CAPCH) AT4G31540 Solyc12g096380.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cationic amino acid transporter (AHRD V3.3 *** S8D7Y4_9LAMI) AT4G21120 Solyc12g096390.2 483 294 433 442 503 542 488 404 344 397 458 363 347 348 526 Peptidyl-tRNA hydrolase II (PTH2) family protein (AHRD V3.3 *-* Q9FT62_ARATH) AT5G10700 Solyc12g096400.2 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 Plant calmodulin-binding-like protein (AHRD V3.3 *-* G7L455_MEDTR) Solyc12g096420.2 578 349 227 343 287 284 307 212 349 385 307 242 405 387 547 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8BF19_ARATH) AT5G10650 Solyc12g096430.1 35 5 5 18 38 13 40 19 15 15 6 26 30 19 12 Ubiquitin carboxyl-terminal hydrolase 19 (AHRD V3.3 *** A0A2G2VJ71_CAPBA) Solyc12g096440.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Hexosyltransferase (AHRD V3.3 *** A0A2G3B4X2_CAPCH) Solyc12g096450.2 763 828 493 451 625 491 487 680 594 412 445 521 976 774 464 Zinc finger protein (AHRD V3.3 *** A0A2U1NTB4_ARTAN) AT4G31420 Solyc12g096460.3 1876 691 463 589 292 279 275 323 443 576 474 440 555 615 588 DUF1644 domain-containing protein (AHRD V3.3 *** A0A1Q3CCQ0_CEPFO) AT4G31410 Solyc12g096470.2 612 386 598 470 488 596 447 457 536 555 579 410 572 513 599 Transcription initiation factor TFIID subunit 10 (AHRD V3.3 *** A0A1U8EZJ4_CAPAN) AT4G31720 Solyc12g096480.1 15 16 24 57 19 46 26 19 38 28 11 13 28 39 53 Protein GLUTAMINE DUMPER 4 (AHRD V3.3 *** A0A2G3B4X7_CAPCH) AT4G31730 Solyc12g096490.1 37 33 60 56 21 58 42 15 24 50 43 11 41 55 142 Protein GLUTAMINE DUMPER 3 (AHRD V3.3 *** A0A2G2VJB6_CAPBA) AT4G31730 Solyc12g096500.2 9453 5977 1979 4189 4088 3115 3446 4545 4281 6353 2621 3379 7391 2859 2286 Zinc finger protein CONSTANS-LIKE 4 (AHRD V3.3 *** A0A2G2VJD2_CAPBA) AT5G24930 Solyc12g096510.3 157 114 36 69 34 64 72 71 49 66 63 48 65 54 101 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R1T0_9MAGN) AT5G66520 Solyc12g096520.3 736 681 765 957 724 804 809 533 640 550 866 570 668 699 1138 Protein phosphatase 2C (AHRD V3.3 *** Q8S8Z0_MESCR) AT4G31750 Solyc12g096530.1 387 322 249 308 291 262 199 212 334 255 152 224 485 311 177 Peroxidase (AHRD V3.3 *** K4DHC6_SOLLC) AT2G24800 Solyc12g096540.2 3686 7804 7243 6486 8562 8798 9030 8042 5647 5172 5805 6492 8114 7597 6220 40S ribosomal protein S10 (AHRD V3.3 *** A0A2G3B4Y1_CAPCH) AT4G25740 Solyc12g096550.2 1554 1174 741 1091 1376 1307 1311 1273 1097 1395 897 874 1064 765 1004 Pheophorbide a oxygenase (AHRD V3.3 *** A0A2U1QIP5_ARTAN) AT2G24820 Solyc12g096560.2 1367 1763 1801 1948 1988 2258 2212 2003 2210 1470 1893 1723 1692 1899 2220 Apyrase-like protein (AHRD V3.3 *** A0MWC2_TOBAC) AT3G04080 Solyc12g096570.1 580 385 472 342 1 13 8 10 322 453 452 104 74 257 493 auxin-regulated gene involved in organ size (AHRD V3.3 -** AT3G59900.1) AT3G59900 Solyc12g096580.2 796 524 304 581 335 464 522 412 390 571 542 390 529 394 575 Potassium transporter (AHRD V3.3 *** A0A2G2VJC7_CAPBA) AT3G02050 Solyc12g096590.3 242 685 635 576 592 673 683 651 462 441 509 534 739 768 566 6,7-dimethyl-8-ribityllumazine synthase (AHRD V3.3 *** Q9XH13_TOBAC) AT2G44050 Solyc12g096600.2 192 111 79 81 48 33 20 28 88 167 99 52 141 83 64 Poly (ADP-ribose) glycohydrolase (AHRD V3.3 *-* A0A2U1PVC3_ARTAN) Solyc12g096610.2 492 259 314 230 80 114 112 68 156 260 309 104 380 258 203 Poly(ADP-ribose) glycohydrolase 1 (AHRD V3.3 *** A0A2G2YAJ8_CAPAN) AT2G31870 Solyc12g096620.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 GDSL esterase Solyc12g096630.2 6 1 0 0 0 0 0 0 1 0 0 0 0 0 0 Inosine-uridine preferring nucleoside hydrolase family protein, expressed (AHRD V3.3 *** Q84MH2_ORYSJ) Solyc12g096640.3 0 0 1 0 4 0 1 0 0 0 0 0 0 0 0 la-related protein 6B-like (AHRD V3.3 *** A0A1U8F078_CAPAN) AT2G43970 Solyc12g096650.2 806 521 679 626 652 542 593 500 627 577 636 516 663 746 619 Vacuolar protein sorting-associated protein 20-like protein 2 (AHRD V3.3 *** A0A1U8F6J1_CAPAN) AT5G09260 Solyc12g096660.3 50 67 30 36 20 16 25 23 39 15 39 16 39 55 79 type I inositol polyphosphate 5-phosphatase 12-like (AHRD V3.3 *** A0A2I4G632_9ROSI) Solyc12g096670.2 923 596 690 682 503 528 496 376 1018 783 1175 528 985 927 1311 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2G3B4V0_CAPCH) AT2G31820 Solyc12g096680.1 13 22 38 13 16 19 24 19 16 11 45 17 35 32 18 Pentatricopeptide repeat (AHRD V3.3 *** A0A200PR52_9MAGN) AT2G03880 Solyc12g096690.2 676 999 976 868 885 888 847 841 888 753 808 886 1169 920 764 Cytosolic Fe-S cluster assembly factor NBP35 (AHRD V3.3 *** K4DHE2_SOLLC) AT5G50960 Solyc12g096700.2 3762 8338 9408 6693 10081 10924 11128 8837 5543 3818 5826 5830 9451 8374 8008 60S ribosomal protein L9 (AHRD V3.3 *** A0A2G3AX04_CAPCH) AT1G33120 Solyc12g096710.2 646 234 461 166 81 108 92 95 212 342 464 151 224 321 364 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (AHRD V3.3 *** A0A2G2YAQ0_CAPAN) Solyc12g096730.3 18 9 37 9 0 3 0 0 3 1 29 4 7 7 11 Pectin lyase-like superfamily protein (AHRD V3.3 *** O22817_ARATH) Solyc12g096740.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectin lyase-like superfamily protein (AHRD V3.3 *** O22817_ARATH) AT3G59850 Solyc12g096750.2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 LEU70481 abscission polygalacturonase AT3G59850 Solyc12g096760.2 886 842 794 847 743 683 731 770 1133 1005 903 1051 718 991 896 2-alkenal reductase (NADP(+)-dependent) (AHRD V3.3 *** A0A2G2WX40_CAPBA) AT5G16990 Solyc12g096770.1 33 1099 229 308 1328 991 886 1363 1232 1600 352 1402 404 710 54 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc12g096780.2 23 1768 469 651 2344 2300 2106 2583 3692 4488 1181 5108 794 1669 231 Alcohol dehydrogenase superfamily (AHRD V3.3 *** A0A200R634_9MAGN) Solyc12g096790.1 0 96 47 48 185 167 171 174 267 182 25 305 76 180 45 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc12g096800.1 0 2 1 0 6 4 2 3 8 5 0 3 2 10 0 HXXXD-type acyl-transferase family protein (AHRD V3.3 *** F4JBC7_ARATH) Solyc12g096810.2 356 358 318 169 112 93 99 94 164 163 188 176 361 480 484 LETM1 domain-containing protein (AHRD V3.3 *** A0A1Q3BGI6_CEPFO) AT3G59820 Solyc12g096820.1 132 191 167 152 373 321 291 280 473 313 304 492 227 217 195 Glycosyltransferase (AHRD V3.3 *** A0A2I4H5B8_9ROSI) AT1G05675 Solyc12g096830.2 1431 633 711 609 534 474 482 607 697 1004 611 657 642 744 630 Glycosyltransferase (AHRD V3.3 *** A0A2I4H5B3_9ROSI) AT1G05675 Solyc12g096840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 N-acetyltransferase (AHRD V3.3 *** B6T916_MAIZE) Solyc12g096850.3 3 7 31 8 5 28 16 19 15 19 5 16 9 8 20 WAT1-related protein (AHRD V3.3 *** K4DHF8_SOLLC) Solyc12g096860.3 89 218 320 214 168 243 232 203 218 148 271 180 180 148 191 Acyl-coenzyme A thioesterase 9 mitochondrial-like (AHRD V3.3 *** A0A2K3PDW3_TRIPR) Solyc12g096870.1 77 209 39 93 375 235 185 302 170 158 64 89 78 47 95 Glycosyltransferase (AHRD V3.3 *** A0A193AUF6_PUNGR) Solyc12g096880.3 52 10 20 11 0 0 0 2 12 21 33 14 47 28 14 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* F4J361_ARATH) AT5G38344 Solyc12g096890.1 123 49 51 41 0 0 0 0 6 51 164 4 123 76 59 F-box protein (AHRD V3.3 *-* A0A2G3B4N2_CAPCH) Solyc12g096900.2 561 428 499 283 39 39 30 26 340 281 613 128 552 242 311 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* A0A2U1LJH5_ARTAN) AT1G65390 Solyc12g096910.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* A0A2G2ZTM2_CAPAN) Solyc12g096920.1 48 24 3 23 1 1 0 1 22 16 9 18 7 18 26 Disease resistance protein (AHRD V3.3 *** A0A200QG84_9MAGN) AT1G53350 Solyc12g096930.2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 Peroxygenase (AHRD V3.3 *** A0A2G3B4S5_CAPCH) AT4G26740 Solyc12g096940.3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 CCT motif family protein (AHRD V3.3 *** A0A2U1QLU6_ARTAN) Solyc12g096950.2 29 46 22 73 71 74 62 75 39 66 56 78 34 33 40 TLD-domain containing nucleolar protein (AHRD V3.3 *** A0A2U1NM40_ARTAN) AT2G05590 Solyc12g096960.2 58 55 70 13 0 0 1 0 9 26 31 2 64 39 60 Major allergen Pru ar 1 (AHRD V3.3 *** Q5GMN2_CAPCH) Solyc12g096970.2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* O22783_ARATH) AT2G33320 Solyc12g096980.3 14 31 45 38 32 29 28 13 42 5 65 18 13 35 86 auxin-regulated IAA11 Solyc12g096990.2 233 489 324 414 454 533 500 554 417 328 227 501 324 461 218 Histone-lysine N-methyltransferase family member protein (AHRD V3.3 *** A0A2R6PX68_ACTCH) AT4G13460 Solyc12g097000.2 359 288 820 240 89 89 107 81 157 419 587 98 788 439 261 Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *-* A0A2U1MRL7_ARTAN) AT1G72890 Solyc12g097010.1 97 149 428 335 145 126 151 126 137 147 427 135 69 173 259 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** F4KIC7_ARATH) Solyc12g097020.2 0 25 31 15 18 17 16 11 17 11 9 7 6 6 20 Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* A0A2U1NJW6_ARTAN) AT1G72890 Solyc12g097030.2 551 719 753 636 736 824 781 698 678 653 865 531 592 591 703 Carboxyl-terminal-processing peptidase 2, chloroplastic (AHRD V3.3 *** A0A1U8EU11_CAPAN) AT4G17740 Solyc12g097040.1 135 177 289 275 374 338 355 317 188 136 260 269 232 234 227 small acidic protein 1 (AHRD V3.3 --* AT4G13520.2) AT4G13520 Solyc12g097050.2 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 Late embryogenesis abundant protein 2 (AHRD V3.3 *** A0A2G2VJ95_CAPBA) Solyc12g097060.1 4 68 58 64 134 138 95 62 47 11 50 30 51 46 59 golgin subfamily A member 6-like protein 2 (AHRD V3.3 *** A0A2I4DJB1_9ROSI) AT4G13540 Solyc12g097070.3 141 301 278 314 440 504 469 473 384 273 321 332 298 329 324 BLISTER (AHRD V3.3 *** A0A2U1QGX3_ARTAN) AT3G23980 Solyc12g097080.2 0 2 3 2 7 1 1 2 1 2 10 0 0 0 0 Glutathione S-transferase (AHRD V3.3 *** A0A200PVK3_9MAGN) Solyc12g097090.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Dirigent protein (AHRD V3.3 *** K4DHI2_SOLLC) AT4G13580 Solyc12g098090.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Chalcone synthase (AHRD V3.3 *** I4DH96_PETHY) Solyc12g098095.1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 Unknown protein Solyc12g098100.3 4 24 16 23 49 58 40 38 14 14 21 41 15 46 9 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A2R6PXD2_ACTCH) Solyc12g098110.1 0 0 0 2 0 3 0 2 0 0 0 0 0 0 0 Plant self-incompatibility protein S1 family (AHRD V3.3 *** A0A061ESX1_THECC) AT3G24060 Solyc12g098120.3 0 0 13 0 0 0 0 1 0 0 0 0 0 0 0 Inositol oxygenase (AHRD V3.3 *** A0A2U1PDJ1_ARTAN) AT5G56640 Solyc12g098130.1 2 14 19 4 5 5 9 8 12 11 2 2 7 4 1 glycine-rich protein 5-like (AHRD V3.3 *-* XP_010314856.1) Solyc12g098140.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein AT1G04670 Solyc12g098150.2 1304 2239 2052 1883 2283 2143 2308 2378 2139 1684 1852 1950 2156 2013 2460 Voltage-dependent potassium channel, beta subunit (AHRD V3.3 *** A0A2H5RZM1_RHIID) AT1G04690 Solyc12g098160.2 817 1045 857 779 876 988 1009 1059 844 848 627 880 895 1080 805 protein ALWAYS EARLY 3-like (AHRD V3.3 *** A0A1S4BH11_TOBAC) AT3G21430 Solyc12g098170.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box domain-containing protein (AHRD V3.3 *** A0A2U1LFK9_ARTAN) Solyc12g098180.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Vesicle-associated membrane protein (AHRD V3.3 *** A0A2G2YAQ2_CAPAN) Solyc12g098190.2 270 130 200 169 98 93 104 81 111 170 237 104 255 168 266 F-box protein (AHRD V3.3 *** A0A2G3B4N2_CAPCH) Solyc12g098200.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 F-box protein (AHRD V3.3 *** A0A2G3B4N2_CAPCH) Solyc12g098210.3 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) AT1G15520 Solyc12g098220.2 70 73 145 100 96 127 126 103 75 45 80 107 65 102 67 RNA-binding protein (AHRD V3.3 *-* AT4G13690.1) Solyc12g098225.1 20 29 15 40 43 54 13 22 21 62 89 62 29 28 170 glycine-rich cell wall structural protein (AHRD V3.3 *-* XP_010314854.1) Solyc12g098240.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 acanthoscurrin-1-like (AHRD V3.3 *-* XP_010314853.1) Solyc12g098250.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 acanthoscurrin-1-like (AHRD V3.3 *-* XP_010314853.1) Solyc12g098260.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 acanthoscurrin-1-like (AHRD V3.3 *-* XP_010314853.1) Solyc12g098270.1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 acanthoscurrin-1-like (AHRD V3.3 *-* XP_010314853.1) Solyc12g098280.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 WAT1-related protein (AHRD V3.3 *** K4DHK2_SOLLC) Solyc12g098290.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 acanthoscurrin-1-like (AHRD V3.3 *-* XP_010314853.1) Solyc12g098300.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g098310.2 5002 1107 679 837 632 556 490 399 728 773 750 540 693 714 1036 Cyclin-dependent kinase inhibitor (AHRD V3.3 *** A0A2G2VID6_CAPBA) AT2G32710 Solyc12g098320.3 2 2 0 2 0 0 0 0 1 0 0 0 2 13 0 cytochrome b5 (AHRD V3.3 *-* A0A2I4EQ08_9ROSI) Solyc12g098330.3 1044 2357 1698 1191 1861 1712 1833 1635 1350 872 1241 1286 2732 2423 1743 60S ribosomal protein L13a (AHRD V3.3 *** B6SJA0_MAIZE) AT5G48760 Solyc12g098340.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G2VIL1_CAPBA) Solyc12g098350.1 680 790 729 729 655 657 596 614 610 728 727 727 568 682 710 Translation initiation factor IF-1, chloroplastic (AHRD V3.3 *** A0A1U8EWV2_CAPAN) AT4G11175 Solyc12g098360.2 172 198 290 202 178 170 225 134 189 185 301 219 302 238 223 Protein arginine methyltransferase NDUFAF7 (AHRD V3.3 *** A0A1U8EXX2_CAPAN) AT1G04900 Solyc12g098370.2 551 337 663 532 395 313 402 321 730 686 745 482 731 487 765 Myb family transcription factor APL (AHRD V3.3 *** A0A1U8F7R6_CAPAN) AT3G24120 Solyc12g098380.3 1921 896 1065 916 687 892 842 673 975 810 1098 765 670 1025 1308 Myosin-binding protein 2 (AHRD V3.3 *** A0A2G3B517_CAPCH) AT1G04890 Solyc12g098390.3 169 302 291 330 217 247 187 171 258 282 435 122 248 356 232 Ankyrin repeat-containing protein (AHRD V3.3 *** A0A2K3NL40_TRIPR) Solyc12g098400.2 2 1 2 8 1 7 3 0 8 3 6 0 3 0 10 O-fucosyltransferase (AHRD V3.3 *** A0A2P5CHR3_PARAD) Solyc12g098410.2 25 249 113 140 177 164 193 145 104 39 85 63 125 161 92 Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* F4JT39_ARATH) AT4G13600 Solyc12g098420.3 694 1472 1348 1071 1230 1155 977 1261 1574 919 1110 984 2097 1602 1564 UBX domain-containing protein 1 (AHRD V3.3 *** A0A1J3FKK2_NOCCA) AT1G04850 Solyc12g098430.2 156 155 171 175 178 159 168 149 144 143 190 172 165 153 136 Actin-related protein 2/3 complex subunit 4 (AHRD V3.3 *-* A0A2G3AVC7_CAPCH) AT4G14147 Solyc12g098440.2 322 434 432 457 556 517 566 596 470 399 551 495 421 488 436 RPM1-interacting protein 4-like (AHRD V3.3 *** A0A2K3L873_TRIPR) Solyc12g098450.2 7 4 6 9 4 15 15 6 7 13 7 3 5 11 0 magnesium transporter NIPA (DUF803) (AHRD V3.3 *** AT4G13800.8) AT4G13800 Solyc12g098460.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 AP2 domain-containing protein/B3 domain-containing protein (AHRD V3.3 *-* A0A1Q3CSS8_CEPFO) Solyc12g098463.1 1118 574 936 901 551 851 694 564 734 527 1396 602 762 945 1755 myb-like protein X (AHRD V3.3 *-* A0A2I4GJJ9_9ROSI) AT5G48610 Solyc12g098467.1 936 590 1051 847 534 937 727 437 692 425 1572 545 682 876 2213 glutamic acid-rich protein-like (AHRD V3.3 *-* A0A2I4E2H6_9ROSI) Solyc12g098480.1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 UDP-glucuronate 4-epimerase 6 (AHRD V3.3 *-* A0A2G3D135_CAPCH) Solyc12g098490.2 90 569 873 840 480 421 539 493 604 283 322 387 599 664 494 Serine hydroxymethyltransferase (AHRD V3.3 *** A0A2G3CI35_CAPCH) AT4G13930 Solyc12g098500.2 467 802 777 842 603 530 504 647 1015 554 492 704 815 682 752 Adenosylhomocysteinase (AHRD V3.3 *** I3QHX5_NICBE) AT3G23810 Solyc12g098510.1 197 164 107 187 160 183 174 173 139 158 234 150 159 157 114 Rapid ALkalinization Factor (AHRD V3.3 *-* A0A2U1NZS8_ARTAN) Solyc12g098520.2 3407 1056 926 914 340 376 315 383 696 1335 1192 564 838 872 1285 Heat stress transcription factor A-5 (AHRD V3.3 *** A0A2G3AV96_CAPCH) AT4G13980 Solyc12g098530.2 249 228 194 188 168 213 147 215 203 198 186 171 360 245 247 histidine protein methyltransferase 1 homolog (AHRD V3.3 *** A0A2I4GXB1_9ROSI) AT4G14000 Solyc12g098540.2 0 1 0 0 0 0 0 0 0 2 20 0 0 0 0 Apyrase (AHRD V3.3 *** A0A2G3AV93_CAPCH) Solyc12g098545.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Apyrase (AHRD V3.3 *-* A0A2G2VJ46_CAPBA) Solyc12g098560.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Glucan endo-1,3-beta-glucosidase 3-like protein (AHRD V3.3 *** A0A2K3MT62_TRIPR) AT3G23770 Solyc12g098570.2 1456 980 3314 1932 1413 1805 1589 882 1292 965 4577 1089 1370 1590 2449 receptor-like kinase TMK4 (AHRD V3.3 *** A0A2G2YAU4_CAPAN) AT3G23750 Solyc12g098580.1 0 0 0 0 0 1 0 0 2 0 0 0 4 1 5 Glycosyltransferase (AHRD V3.3 *** A0A2Z4BSF1_9APIA) Solyc12g098590.3 141 852 461 289 226 268 337 332 1175 356 224 1174 1502 967 971 Glycosyltransferase (AHRD V3.3 *** A0A2I4GJH4_9ROSI) AT4G15550 Solyc12g098600.1 119 151 209 177 187 204 140 239 190 162 123 172 60 90 59 Glycosyltransferase (AHRD V3.3 *** A0A2I4GJH4_9ROSI) Solyc12g098603.1 56 22 49 23 47 40 28 18 56 47 127 11 9 38 0 Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** A0A1U8ETM7_CAPAN) Solyc12g098607.1 43 10 3 1 0 3 0 0 0 12 1 1 0 33 49 Cysteine proteinase inhibitor (AHRD V3.3 *** A0A2G2YAU0_CAPAN) AT2G31980 Solyc12g098620.2 7 28 5 33 23 24 22 33 17 26 36 14 18 31 29 bHLH transcription factor 072 AT3G07340 Solyc12g098630.2 40 488 474 490 881 835 862 1060 606 310 452 634 77 348 326 Kinesin-like protein KIN12B (AHRD V3.3 *** A0A2G3B535_CAPCH) AT3G23670 Solyc12g098640.3 1417 1943 1872 1904 2260 2259 2416 2166 3082 3251 3043 3402 2168 2138 1786 Cycloeucalenol cycloisomerase (AHRD V3.3 *** A0A2G2YAV1_CAPAN) AT5G50375 Solyc12g098650.2 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 Rho GDP-dissociation inhibitor 1 (AHRD V3.3 *** A0A2G2YAX6_CAPAN) Solyc12g098660.3 123 128 174 210 124 146 163 115 291 208 188 223 96 104 105 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1NVP4_ARTAN) AT5G19850 Solyc12g098670.3 774 620 795 820 723 790 819 720 769 827 834 806 630 727 888 Signal peptide peptidase-like 3 (AHRD V3.3 *** A0A2G3AVA8_CAPCH) AT1G05820 Solyc12g098680.3 2843 2514 2122 2107 2012 2283 2227 1780 1896 1663 1968 1701 2339 1862 2820 Unknown protein Solyc12g098690.2 682 898 884 996 995 935 1004 946 1090 1155 923 992 868 1014 1144 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** F4K6D8_ARATH) Solyc12g098700.1 2406 1721 1994 1559 1036 1292 1167 1194 1815 1270 2211 1451 1731 1934 2448 RNA helicase DEAD42 AT1G20920 Solyc12g098710.2 120 145 177 247 152 160 138 177 182 200 136 184 149 158 187 15-cis-zeta-carotene isomerase, chloroplastic (AHRD V3.3 *** A0A1U8ESN0_CAPAN) AT1G10830 Solyc12g098720.3 49 86 81 125 113 152 158 103 95 63 206 109 92 128 138 V-type proton ATPase subunit e1 (AHRD V3.3 *** A0A1J3HC60_NOCCA) AT5G55290 Solyc12g098730.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Phospholipase A1-Ialpha2, chloroplastic (AHRD V3.3 *** A0A2G3AVB3_CAPCH) AT1G05800 Solyc12g098740.2 7293 7177 6239 6480 5845 5556 6186 6844 6762 7269 5991 6290 5609 6123 6708 clathrin interactor EPSIN 2-like (AHRD V3.3 *** A0A2I4ETK3_9ROSI) AT2G43160 Solyc12g098750.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g150131.1 54 167 200 1214 180 156 407 208 248 209 196 263 102 173 66 extensin-2-like (AHRD V3.3 *-* A0A1U8ESB3_CAPAN) Solyc12g150132.1 1 24 23 176 27 20 26 12 13 12 14 23 11 20 14 extensin-2-like (AHRD V3.3 *-* A0A1U8ESB3_CAPAN) Solyc12g098770.2 1 1 6 21 1 4 5 1 3 0 4 0 0 1 0 Unknown protein Solyc12g098780.2 6 14 20 74 6 15 21 27 5 17 11 15 9 28 12 extensin-2-like (AHRD V3.3 *-* A0A1U8ESB3_CAPAN) Solyc12g098790.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g098800.2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Unknown protein Solyc12g098805.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g098810.2 229 357 426 407 472 496 490 384 483 247 398 466 489 561 487 Chitinase-like protein (AHRD V3.3 *** Q6JX04_GOSHI) AT3G16920 Solyc12g098820.2 1411 1471 1057 1137 1041 979 999 1084 1200 1033 1147 987 1454 1241 985 Protein kinase superfamily protein (AHRD V3.3 *** A0A1I9LM53_ARATH) AT3G59350 Solyc12g098823.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g098827.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g098830.2 1812 2464 2290 2504 2362 2604 2759 2351 1941 1903 2101 2093 2514 2485 2579 5-nucleotidase (AHRD V3.3 *** B6SV15_MAIZE) AT5G48960 Solyc12g098840.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ABC transporter B family member 12 (AHRD V3.3 *** A0A2G3B551_CAPCH) Solyc12g098850.2 1961 657 1870 520 702 863 739 647 529 981 667 513 645 473 824 ethylene-forming enzyme AT1G48300 Solyc12g098860.2 1822 1153 1000 1020 824 1022 887 856 607 847 768 904 866 1070 888 Chromatin remodeling factor18 (AHRD V3.3 *** F4HWU9_ARATH) AT1G48310 Solyc12g098870.3 0 3 0 0 1 0 0 0 3 0 0 0 0 3 0 ABC transporter B family member 12 (AHRD V3.3 *** A0A2G3B551_CAPCH) Solyc12g098880.2 1 28 25 10 14 20 13 11 24 31 3 57 3 2 18 SsrA-binding protein (AHRD V3.3 *** Q9LUN9_ARATH) Solyc12g098890.2 145 411 391 333 540 670 673 599 510 317 399 455 250 327 338 50S ribosomal protein L18 (AHRD V3.3 *** A0A1U8F639_CAPAN) AT1G48350 Solyc12g098900.2 4559 755 581 325 5 5 1 1 411 865 646 309 117 1504 2754 Late embryogenesis abundant protein D-29 (AHRD V3.3 *-* A0A2G3B563_CAPCH) Solyc12g098910.2 261 203 99 254 123 122 83 92 190 279 222 156 166 135 179 Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A2G2VIL4_CAPBA) AT3G17510 Solyc12g098920.2 1066 732 436 858 917 721 716 923 839 1096 573 685 639 524 594 Guanosine-3'5'-bis(Diphosphate) 3'-pyrophosphohydrolase (AHRD V3.3 *** E5GC47_CUCME) AT3G17470 Solyc12g098930.3 0 4 0 14 0 1 2 1 13 3 11 6 9 9 1 Mitochondrial pyruvate dehydrogenase kinase (AHRD V3.3 *** E5GC37_CUCME) Solyc12g098940.2 4863 5392 5781 4229 4187 4818 4979 4394 2998 3566 4497 3392 6748 4873 5160 Ubiquitin (AHRD V3.3 *** B1P770_LOLTE) AT2G47110 Solyc12g098945.1 0 4 0 2 0 4 4 0 0 3 0 2 1 0 0 Unknown protein Solyc12g098950.2 4052 2029 1568 1673 1837 1847 1696 1481 1659 1749 1834 1494 1406 1472 1690 Novel plant snare, putative (AHRD V3.3 *** B9S000_RICCO) AT3G17440 Solyc12g098960.2 99 425 214 359 233 186 188 199 391 295 223 274 173 205 308 Protein kinase domain (AHRD V3.3 *** A0A200R1U1_9MAGN) AT1G56720 Solyc12g098980.2 2716 2570 4401 3778 3520 3916 3703 2899 2358 2583 4094 2795 2831 2391 3679 Pto kinase interactor 1 AT3G17410 Solyc12g098990.2 213 355 398 315 326 338 343 352 347 254 281 310 289 319 386 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1QJ39_ARTAN) AT3G06430 Solyc12g099000.3 2897 3811 5191 3095 2103 1877 2054 2378 3565 3702 4499 2852 3841 2626 2405 S-adenosylmethionine synthase (AHRD V3.3 *** A0A2G2VJM2_CAPBA) AT4G01850 Solyc12g099010.3 365 350 262 384 308 393 383 326 258 269 208 265 293 389 297 BEACH domain (AHRD V3.3 *** A0A200QSV0_9MAGN) AT5G18525 Solyc12g099020.2 8 36 5 21 29 16 24 27 31 22 1 18 6 13 8 protein serine/threonine kinase (AHRD V3.3 *-* AT5G18525.1) Solyc12g099025.1 3462 5762 6261 5119 6146 6346 6003 5928 3926 4033 4600 4643 7472 5900 5037 Ubiquitin (AHRD V3.3 *** B1P770_LOLTE) AT2G47110 Solyc12g099040.2 1 4 9 3 6 5 4 1 3 4 12 4 10 1 17 NBS-LRR resistance-like protein (AHRD V3.3 *-* A0A2U1KDY7_ARTAN) Solyc12g099050.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g099060.1 0 5 2 13 3 12 8 22 5 10 0 3 1 6 0 Disease resistance RPP13-like protein 1 (AHRD V3.3 *-* A0A2I0W0M2_9ASPA) Solyc12g099070.1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 Inositol transporter 3 Solyc12g099080.3 1213 877 1213 1168 870 1032 988 792 915 1031 1284 874 817 831 1494 ADP ribosylation factor (AHRD V3.3 *** Q08IJ1_TOBAC) Solyc12g099090.3 1965 2357 1638 1743 2049 1979 2051 2388 1991 1909 1282 2126 2100 2053 1398 Evolutionarily conserved C-terminal region 2 (AHRD V3.3 *-* F4JDC2_ARATH) AT1G48110 Solyc12g099100.2 915 1295 1041 1039 948 960 946 993 1091 910 981 848 2020 1516 1200 Dihydrolipoyl dehydrogenase (AHRD V3.3 *** A0A2G3B580_CAPCH) AT1G48030 Solyc12g099110.2 141 234 171 169 206 242 229 254 168 142 152 187 280 252 165 30S ribosomal protein S1 protein (AHRD V3.3 *** A0A2U1N3I0_ARTAN) AT5G30510 Solyc12g099120.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Abscisic acid induced MYB1 Solyc12g099130.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 108 Solyc12g099140.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R2R3MYB transcription factor 45 AT3G06490 Solyc12g099150.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ATP synthase subunit beta, chloroplastic (AHRD V3.3 *-* A0A2U1KL25_ARTAN) Solyc12g099160.2 429 557 1101 670 592 537 593 569 876 1256 1168 862 860 658 631 Carboxypeptidase (AHRD V3.3 *** A0A1U8EWS6_CAPAN) AT3G17180 Solyc12g099170.3 99 90 133 144 141 158 120 107 112 103 80 115 114 103 125 F-box protein (AHRD V3.3 *** A0A2G2YB47_CAPAN) AT2G05600 Solyc12g099180.3 25 23 20 38 14 24 30 17 58 41 37 36 6 34 89 Nuclear poly(A) polymerase 3 (AHRD V3.3 *** A0A2G2VJL0_CAPBA) AT3G06560 Solyc12g099190.1 97 19 50 106 9 1 3 0 14 13 19 8 93 62 181 Pectinesterase inhibitor (AHRD V3.3 *** A0A2U1NF42_ARTAN) AT1G47960 Solyc12g099200.2 1499 581 620 793 508 404 415 322 499 599 832 275 617 752 1364 Invertase inhibitor (AHRD V3.3 *** O49908_TOBAC) AT1G47960 Solyc12g099210.2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Invertase inhibitor (AHRD V3.3 *** O49908_TOBAC) AT1G47960 Solyc12g099220.1 0 6 18 2 0 3 2 4 5 2 2 1 4 4 26 GRAS family transcription factor (AHRD V3.3 *** A0A2K3P9W6_TRIPR) Solyc12g099230.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Pectinesterase (AHRD V3.3 *** A0A2G3B5L4_CAPCH) AT3G17060 Solyc12g099240.2 474 740 792 575 869 822 888 788 668 535 679 766 1028 909 732 Huntingtin interacting protein K (AHRD V3.3 *** B6SY57_MAIZE) AT3G06610 Solyc12g099250.2 1112 857 926 1169 1148 1428 1497 1256 1130 940 960 916 897 1006 1200 MAP kinase kinase kinase 89 AT3G06620 Solyc12g099260.2 257 3013 1491 2001 2901 2689 2877 3418 4385 3086 2859 4478 1664 2297 1491 Citrate synthase-like (AHRD V3.3 *** A0A200R252_9MAGN) AT5G49460 Solyc12g099270.2 2456 1650 1433 1511 1134 1324 1311 1223 1335 1476 1240 1135 1350 1834 2276 4Fe-4S ferredoxin-iron-sulfur binding protein (AHRD V3.3 *** A0A2K3N1K7_TRIPR) Solyc12g099280.2 1327 833 889 506 272 336 346 231 377 393 630 416 725 990 1106 Fip1 domain-containing protein (AHRD V3.3 *** A0A1Q3BSA1_CEPFO) AT3G66652 Solyc12g099290.2 259 902 846 921 1033 1191 1051 1247 1149 867 848 1618 765 1131 484 Aldehyde dehydrogenase (AHRD V3.3 *** F4JC27_ARATH) AT3G66658 Solyc12g099300.1 4 4 17 18 17 19 20 7 9 13 14 2 7 1 37 UPF0481 protein At3g47200-like (AHRD V3.3 *** A0A2I4F254_9ROSI) Solyc12g099310.2 2827 1934 1884 1948 1756 1496 1459 1518 1921 2509 2121 1774 2174 1822 2578 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200PWE2_9MAGN) AT3G17000 Solyc12g099320.2 1821 1312 1175 1248 1269 1192 1231 1236 1178 1201 1272 1074 1191 1342 1321 serine/threonine-protein phosphatase 4 regulatory subunit 3-like (AHRD V3.3 *** A0A2I4F1X2_9ROSI) AT3G06670 Solyc12g099330.2 905 2217 2616 2095 2653 2820 2781 2379 1444 1063 2005 1871 2950 2408 2083 Unknown protein Solyc12g099340.3 306 283 260 218 266 288 298 227 288 265 351 273 376 380 353 Calmodulin-binding transcription activator (AHRD V3.3 *** A0A1I9LRY7_ARATH) AT4G16150 Solyc12g099350.1 99 114 117 85 169 120 175 186 133 79 79 171 92 124 61 Unknown protein Solyc12g099360.2 10 23 7 17 24 24 31 43 12 7 10 10 20 26 64 AMP-dependent synthetase/ligase (AHRD V3.3 *** A0A200R265_9MAGN) AT3G16910 Solyc12g099370.2 180 209 259 183 284 312 320 215 218 68 206 162 247 359 208 GATA transcription factor 23 (AHRD V3.3 *** A0A2G2VJP8_CAPBA) AT3G16870 Solyc12g099380.3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 Two-component response regulator (AHRD V3.3 *** A0A2G2VJN5_CAPBA) Solyc12g099390.2 3361 1310 1920 1197 728 790 724 620 1088 1777 1539 1274 1004 992 1512 Protein DEHYDRATION-INDUCED 19-like protein 7 (AHRD V3.3 *** A0A2G3B5I9_CAPCH) AT5G49230 Solyc12g099395.1 0 0 2 1 0 2 2 0 0 0 19 0 3 0 0 Major allergen pru ar 1 (AHRD V3.3 *** A0A2P4N703_QUESU) Solyc12g099400.2 441 641 873 385 515 492 562 631 482 752 443 497 372 487 274 hypothetical protein (AHRD V3.3 *** AT4G16060.1) AT4G16060 Solyc12g099410.2 0 5 28 0 0 0 1 1 0 0 0 0 0 1 0 Pectinesterase (AHRD V3.3 *** A0A1U8F7L2_CAPAN) AT5G27870 Solyc12g099420.2 983 1142 1131 1072 1156 1231 1217 1249 1193 884 1057 1112 1175 1325 989 Condensin-2 complex subunit H2 (AHRD V3.3 *** A0A1J3GA08_NOCCA) AT3G16730 Solyc12g099430.2 300 115 110 333 17 10 2 3 73 45 84 5 120 103 322 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1MWY4_ARTAN) Solyc12g099440.3 6085 3253 2171 2495 1557 1528 1781 1685 3701 3552 2760 2466 3480 3185 3313 Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a (AHRD V3.3 *** A0A2G2VJQ0_CAPBA) AT3G06860 Solyc12g099450.3 75 203 181 235 387 350 337 310 151 133 119 258 96 151 74 Vitellogenin-like protein (AHRD V3.3 *-* Q0WM46_ARATH) AT5G49100 Solyc12g099460.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g099465.1 140 53 143 50 19 50 51 56 51 47 168 21 64 58 62 senescence-associated gene 21 (AHRD V3.3 -** AT4G02380.1) Solyc12g099470.2 1025 1617 1274 1019 1300 1139 1179 1397 1187 1046 1083 1231 1745 1598 1084 Elongation factor (AHRD V3.3 *** A0A200QRS9_9MAGN) AT1G04170 Solyc12g099480.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 UDP-glucuronic acid decarboxylase 4 (AHRD V3.3 *** A0A2G2VJP5_CAPBA) Solyc12g099490.3 489 566 873 561 882 834 676 698 750 500 817 674 807 851 909 7-dehydrocholesterol reductase-like protein (AHRD V3.3 *-* AT1G16810.3) AT1G16810 Solyc12g099500.2 168 89 421 124 56 74 60 44 79 86 267 85 123 101 287 transmembrane protein (AHRD V3.3 -** AT3G06890.1) AT3G06890 Solyc12g099510.3 1118 1647 1436 1637 1994 1926 1881 2231 1637 1215 1511 1696 1278 1499 1183 condensin-2 complex subunit D3 isoform X1 (AHRD V3.3 *** A0A2I4DSX7_9ROSI) AT4G15890 Solyc12g099520.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** O82240_ARATH) Solyc12g099530.3 444 465 317 304 383 407 365 385 386 354 284 401 460 435 415 Ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** A0A2G3B5J3_CAPCH) AT4G15880 Solyc12g099540.2 238 397 304 470 552 595 623 670 519 371 535 529 177 381 308 Kinesin-like protein (AHRD V3.3 *** A0A2G3B5J6_CAPCH) AT3G16630 Solyc12g099550.1 311 340 360 329 317 224 233 284 225 468 313 282 420 289 238 F-box domain-containing protein (AHRD V3.3 *** A0A2U1L7L4_ARTAN) Solyc12g099560.2 4446 5039 3858 4320 4458 4151 4646 4276 3364 3634 3574 4017 4950 4806 3988 Arginine methyltransferase (AHRD V3.3 *** A0A1Y1HZY4_KLENI) AT3G06930 Solyc12g099570.3 159 233 276 213 290 250 243 295 242 190 187 219 264 247 228 Unknown protein Solyc12g099580.2 15 10 36 41 3 6 2 7 7 10 21 11 10 8 43 WAT1-related protein (AHRD V3.3 *** K4DHX9_SOLLC) AT4G01440 Solyc12g099590.1 49 74 170 138 63 103 68 55 68 67 178 53 75 93 173 hypothetical protein (AHRD V3.3 *** AT1G63310.1) AT1G63310 Solyc12g099600.2 268 292 201 358 217 246 270 207 307 240 147 229 375 359 400 Protein phosphatase 2C (AHRD V3.3 *** A0A2U1QFI0_ARTAN) AT3G16560 Solyc12g099610.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Flowering-promoting factor 1 (AHRD V3.3 *** A0A1U8FE64_CAPAN) AT5G24860 Solyc12g099620.1 49 62 31 18 13 43 25 29 42 16 9 21 48 59 81 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2VJF0_CAPBA) AT4G32430 Solyc12g099630.2 53 54 30 68 47 49 51 68 57 53 43 52 48 56 83 Mitochondrial carrier protein (AHRD V3.3 *** A0A200QX10_9MAGN) Solyc12g099640.1 15 2 9 15 13 7 21 5 9 6 31 4 7 15 28 Mitochondrial carrier protein (AHRD V3.3 *-* A0A200QX10_9MAGN) Solyc12g099650.2 627 1227 1644 1629 2682 2568 2535 2138 1701 1354 2099 1540 916 880 1647 Photosystem II 5 kDa protein, chloroplastic (AHRD V3.3 *** A0A2G3B5K3_CAPCH) AT1G51400 Solyc12g099655.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Polyadenylate-binding protein RBP45 (AHRD V3.3 *** A0A2G3B5M5_CAPCH) Solyc12g099660.2 1034 1713 1592 1402 1745 1748 1590 1745 1955 1179 1571 1383 2035 1950 1839 Glucosidase 2 subunit beta (AHRD V3.3 *-* A0A2G2YBK1_CAPAN) AT5G56360 Solyc12g099670.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 histidine kinase CKI1-like (AHRD V3.3 *-* A0A2I4DDU4_9ROSI) Solyc12g099680.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CIC6_CEPFO) AT5G12460 Solyc12g099690.1 12 0 0 0 0 0 0 0 0 0 0 0 0 5 0 Transferring glycosyl group transferase (DUF604) (AHRD V3.3 *-* F4JNZ5_ARATH) Solyc12g099700.3 366 699 529 525 702 517 539 697 543 476 445 527 632 656 517 Lipoyl synthase, chloroplastic (AHRD V3.3 *** A0A1U8F6L0_CAPAN) AT5G08415 Solyc12g099705.1 199 555 635 595 798 838 1005 653 416 293 555 509 566 498 545 reactive oxygen species modulator 1 (AHRD V3.3 *** A0A2I4FIE9_9ROSI) AT3G07910 Solyc12g099720.2 1 0 0 0 0 3 0 2 0 0 0 0 0 0 3 histidine kinase CKI1-like (AHRD V3.3 *** A0A2I4DDU4_9ROSI) AT2G47430 Solyc12g099730.3 0 8 2 5 0 1 5 2 18 4 0 0 5 2 0 DUF604 domain-containing protein (AHRD V3.3 *** A0A1Q3CIC6_CEPFO) AT5G12460 Solyc12g099740.2 981 1115 1192 1348 1176 1571 1677 1228 1229 1152 1224 1046 1102 1283 1039 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein (AHRD V3.3 *** F4K149_ARATH) AT5G19420 Solyc12g099760.2 611 480 448 453 367 378 386 455 450 388 371 382 553 416 420 Homeobox domain-containing protein (AHRD V3.3 *** A0A1Q3B258_CEPFO) AT4G03250 Solyc12g099770.2 420 277 440 336 371 295 250 267 264 322 300 237 360 368 270 Mitochondrial fission 1 protein (AHRD V3.3 *** A0A2G3B5D8_CAPCH) AT3G57090 Solyc12g099780.2 4 5 5 6 1 9 12 3 7 5 1 4 4 1 4 RPM1-interacting protein 4 (RIN4) family protein (AHRD V3.3 *-* AT5G19473.1) Solyc12g099790.3 11 27 45 32 106 22 19 59 2 0 38 0 3 18 46 Calcium-dependent protein kinase (AHRD V3.3 *** B2KTB3_WHEAT) AT5G12180 Solyc12g099800.2 138 536 395 388 487 498 528 527 402 351 304 440 447 472 307 Isomerase (AHRD V3.3 *** B6SS56_MAIZE) AT5G19370 Solyc12g099810.2 165 169 227 238 185 211 232 187 172 252 202 174 324 228 191 CRT (Chloroquine-resistance transporter)-like transporter (AHRD V3.3 *** A0A1Y1I3N1_KLENI) AT5G12170 Solyc12g099820.1 185 301 225 197 273 267 202 280 200 189 198 214 259 246 198 Signal recognition particle 9 kDa protein (AHRD V3.3 *** A0A2G2VIW7_CAPBA) AT3G49100 Solyc12g099830.2 368 326 351 308 361 257 266 286 419 445 282 388 355 359 351 Protein kinase domain (AHRD V3.3 *** A0A200R4T5_9MAGN) AT1G63500 Solyc12g099840.1 114 179 219 177 178 134 169 190 193 150 120 169 172 210 145 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1MUJ5_ARTAN) AT5G12100 Solyc12g099850.1 72 105 85 141 181 137 173 139 93 100 78 135 94 166 107 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QKE9_9MAGN) Solyc12g099860.2 143 103 118 93 91 103 83 73 74 92 129 77 99 67 88 DAR GTPase 2, mitochondrial (AHRD V3.3 *** A0A2G2ZTI5_CAPAN) AT4G10650 Solyc12g099870.3 1 1 3 3 3 3 0 1 3 0 5 0 0 0 1 receptor-like protein 12 (AHRD V3.3 *** A0A1U8F785_CAPAN) Solyc12g099880.1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *-* A0A1U8ETX3_CAPAN) Solyc12g099890.2 1379 1821 1342 958 1271 1211 1338 1441 1449 823 1192 1064 1826 1645 1180 Protein SDA1 (AHRD V3.3 *** A0A2G3B5M7_CAPCH) AT1G13160 Solyc12g099900.1 255 244 316 282 172 145 192 178 416 326 297 246 461 278 207 SCL3 (scarecrow-like 3) AT1G50420 Solyc12g099910.2 1700 1369 1393 1380 1129 1348 1476 1237 1474 1087 1406 1180 1075 1571 1771 Protein CHROMATIN REMODELING 5 (AHRD V3.3 *** A0A2G3B5M0_CAPCH) AT2G13370 Solyc12g099920.2 605 404 536 347 290 346 333 342 450 338 428 432 467 489 664 hypothetical protein (AHRD V3.3 *-* AT1G21560.6) AT1G77270 Solyc12g099930.2 684 811 230 537 302 256 225 357 504 608 287 160 595 124 805 Serine--glyoxylate aminotransferase (AHRD V3.3 *** A0A2G2YAX9_CAPAN) AT2G13360 Solyc12g099940.2 634 334 372 244 378 302 345 301 306 493 358 360 303 291 396 Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** AT2G06025.6) Solyc12g099950.3 0 1 0 0 0 0 1 0 2 0 0 5 0 0 0 receptor-like protein 12 (AHRD V3.3 *** A0A1S3ZVQ5_TOBAC) Solyc12g099960.1 707 534 735 452 534 557 494 420 433 477 726 652 331 537 690 ribosomal protein-like protein (AHRD V3.3 *** AT1G16790.1) AT1G16790 Solyc12g099970.2 11710 4100 2491 2869 2037 2752 2749 2071 2277 4791 4345 3212 1963 2674 2590 SNF1 kinase complex anchoring protein AT5G21170 Solyc12g099980.3 198 68 78 19 3 25 11 2 14 16 34 12 28 37 32 receptor-like protein 12 (AHRD V3.3 *** A0A1U8F785_CAPAN) Solyc12g099990.2 642 1296 1640 1478 1780 1547 1879 1639 1397 910 1551 1193 1560 1655 1328 Calmodulin 5 Solyc12g100000.3 2072 1883 2551 2288 1934 2553 2479 1867 1570 1464 2326 1366 1685 1948 2363 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CB55_CAPCH) AT2G23140 Solyc12g100010.1 28 37 13 23 8 7 20 15 35 34 43 41 11 16 7 receptor-like protein 12 (AHRD V3.3 *** A0A1U8ETX1_CAPAN) Solyc12g100020.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 receptor-like protein 12 (AHRD V3.3 *** A0A1U7VUE9_NICSY) Solyc12g100030.2 70 12 19 65 7 4 0 0 14 16 26 12 15 22 44 receptor-like protein 12 (AHRD V3.3 *** A0A1U8ETX1_CAPAN) AT3G05660 Solyc12g100040.2 542 375 559 491 402 524 436 362 406 353 529 397 416 526 538 Sequence-specific DNA binding transcription factor (AHRD V3.3 *** A0A2K3PC30_TRIPR) AT1G21200 Solyc12g100050.2 928 656 557 485 565 422 397 453 427 622 400 516 631 702 824 PRELI/MSF1-like protein (AHRD V3.3 *** A0A2U1KXN1_ARTAN) AT5G13070 Solyc12g100060.1 15145 4799 5091 5515 5097 5524 4783 4431 3932 7171 5935 5132 3200 3765 5566 Zinc finger A20 and AN1 domain stress-associated protein (AHRD V3.3 *** A0A2K3LXD0_TRIPR) Solyc12g100070.3 97 79 95 67 91 69 82 86 62 46 81 53 87 109 83 hemK methyltransferase family member 2-like (AHRD V3.3 *** A0A2I4GF88_9ROSI) AT3G13440 Solyc12g100080.1 1 2 0 5 0 6 2 0 3 2 5 1 3 1 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g100090.1 0 0 0 0 0 0 0 0 0 0 1 3 0 2 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g100100.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g100110.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Extensin-like protein Ext1 (AHRD V3.3 *** Q8VWM5_SOLLC) Solyc12g100120.2 316 870 312 751 2030 2193 2450 1947 721 532 386 689 631 547 457 Proline-tRNA ligase (DUF1680) (AHRD V3.3 *** Q9LXU4_ARATH) AT5G12950 Solyc12g100130.1 353 478 567 549 583 552 599 457 504 459 402 493 514 491 414 Phosphate transporter (AHRD V3.3 *** A0A2H4H6T5_MALDO) AT5G44370 Solyc12g100140.3 713 533 745 777 650 690 658 511 699 599 713 606 634 683 855 Transcription factor bHLH80 (AHRD V3.3 *** A0A2G2YBF5_CAPAN) AT1G51140 Solyc12g100150.2 8 11 8 24 1 5 2 0 49 23 1 10 55 75 89 LOB domain-containing protein 4 (AHRD V3.3 *** A0A2G2YBE6_CAPAN) Solyc12g100160.3 408 1405 1615 1107 1251 1095 1126 1545 1708 799 1004 1187 1153 1323 999 50S ribosomal protein L6 (AHRD V3.3 *** A0A2G2YBF1_CAPAN) AT1G05190 Solyc12g100170.1 3 1 11 10 1 6 6 3 7 6 18 3 5 0 13 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1LXD5_ARTAN) Solyc12g100180.2 213 244 376 269 285 245 240 269 464 306 517 333 320 422 244 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) AT1G15520 Solyc12g100190.2 18 28 69 44 8 33 22 19 25 33 30 16 32 68 43 Pleiotropic drug resistance protein (AHRD V3.3 *** C8CA13_CUCSA) AT1G15520 Solyc12g100200.2 539 286 318 329 267 281 303 366 385 466 357 331 364 364 333 UPF0061 protein (AHRD V3.3 *** A0A2G2XP25_CAPBA) AT5G13030 Solyc12g100210.1 0 0 0 1 0 1 1 0 0 1 0 0 1 3 11 Omega-6 fatty acid desaturase (AHRD V3.3 *-* Q461Q1_HEVBR) Solyc12g100220.2 2 4 5 3 7 0 4 1 3 0 0 0 0 2 0 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** Q94AL3_ARATH) AT3G55290 Solyc12g100230.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Omega-6 fatty acid desaturase (AHRD V3.3 *** Q461Q1_HEVBR) Solyc12g100240.1 52 41 0 7 0 3 3 0 8 30 8 2 18 34 0 Fatty acid desaturase (AHRD V3.3 *-* A0A200QRI1_9MAGN) Solyc12g100250.3 6 5 0 0 0 0 0 0 0 0 4 0 2 9 0 Fatty acid desaturase (AHRD V3.3 *** A0A200QRI1_9MAGN) Solyc12g100260.1 2 0 6 1 0 0 0 0 0 1 0 0 0 2 0 Fatty acid desaturase (AHRD V3.3 *-* A0A200QRI1_9MAGN) Solyc12g100270.2 1879 595 259 211 80 51 35 70 506 2857 678 397 338 482 170 Fatty acid hydroxylase superfamily (AHRD V3.3 *** A0A2U1L8N4_ARTAN) AT1G02205 Solyc12g100280.3 6 27 23 18 17 33 30 29 21 23 21 21 13 12 7 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *-* F4IPI3_ARATH) Solyc12g100290.3 451 237 273 244 191 202 245 193 245 209 248 228 363 227 221 Histone-lysine n-methyltransferase ashh3 (AHRD V3.3 *** A0A1J6IN09_NICAT) AT2G44150 Solyc12g100300.2 0 1 0 0 0 1 1 2 2 3 0 2 0 0 0 Metal tolerance protein 3 (AHRD V3.3 *** A0A2G2YBF6_CAPAN) AT3G58060 Solyc12g100310.2 1129 1171 1395 1317 1690 1906 1907 1716 1540 1173 1309 1512 1453 1654 1087 Protein kinase family protein (AHRD V3.3 *** A0A2U1M4N4_ARTAN) Solyc12g100320.2 396 385 463 334 367 417 445 398 478 360 441 326 514 555 432 hypothetical protein (AHRD V3.3 *** AT3G63390.1) AT3G63390 Solyc12g100330.2 367 1767 1514 1605 2810 2809 3078 3256 1576 1010 1223 1972 640 1454 773 cytosine-5 DNA methyltransferase3L AT1G69770 Solyc12g100340.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 serine/arginine-rich SC35-like splicing factor SCL30A (AHRD V3.3 *-* A0A2I4GQ02_9ROSI) Solyc12g100360.1 2312 1791 1729 1666 1485 1760 1886 1578 1647 1554 1436 1471 1502 1826 1723 calpain-type cysteine protease DEK1 (AHRD V3.3 *** A0A2I4FZU5_9ROSI) AT1G55350 Solyc12g100363.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein Solyc12g100367.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unknown protein