FastQCFastQC Report
Sat 1 Apr 2023
C.Las.0.3.R2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC.Las.0.3.R2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36485368
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG566010.15513342225299742No Hit
CTTTGATTCCCGTAAGCAGAGATCTTTCTGATTTGAAGAACATGGAAACC465720.1276456907327891No Hit
CTTAACTACTTTCGAACTTTGATTCCCGTAAGCAGAGATCTTTCTGATTT380600.10431579037382877No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)