FastQCFastQC Report
Tue 16 May 2023
WT.37.3.R2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameWT.37.3.R2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24145058
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCATAGCAAAGCAAAGCTTCAAAACAGAGCAAACGCAAAGAGTAGCAA341810.14156520145861734No Hit
CAAGAACCAAAAGTCTCCCGAAAAGCAACGAACAATGTCTCTCATTCCAA294800.1220953786899166No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)