Sample	Total read pairs processed	Read 1 with adapter	Read 2 with adapter	Pairs that were too short	Pairs with too many N	Pairs written (passing filters)
MP1.1	27,614,654	673,141 (2.4%)	743,999 (2.7%)	0 (0.0%)	3 (0.0%)	27,614,651 (100.0%)
MP1.2	35,223,140	856,080 (2.4%)	941,715 (2.7%)	0 (0.0%)	5 (0.0%)	35,223,135 (100.0%)
MP1.3	41,658,034	1,023,655 (2.5%)	1,092,138 (2.6%)	0 (0.0%)	8 (0.0%)	41,658,026 (100.0%)
MP2.1	41,214,450	997,636 (2.4%)	1,080,393 (2.6%)	0 (0.0%)	4 (0.0%)	41,214,446 (100.0%)
MP2.2	27,114,137	666,210 (2.5%)	734,136 (2.7%)	0 (0.0%)	2 (0.0%)	27,114,135 (100.0%)
MP2.3	39,310,986	960,221 (2.4%)	1,068,293 (2.7%)	3 (0.0%)	76,046 (0.2%)	39,234,937 (99.8%)
mock.1	38,416,300	919,159 (2.4%)	1,011,167 (2.6%)	0 (0.0%)	73,938 (0.2%)	38,342,362 (99.8%)
mock.2	34,368,945	825,910 (2.4%)	898,784 (2.6%)	0 (0.0%)	67,578 (0.2%)	34,301,367 (99.8%)
mock.3	28,622,257	685,238 (2.4%)	757,874 (2.6%)	0 (0.0%)	53,524 (0.2%)	28,568,733 (99.8%)