FastQCFastQC Report
Wed 9 Apr 2025
tfl1.20.dry.SD.1.R2.clean.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenametfl1.20.dry.SD.1.R2.clean.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7586152
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length20-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAAACATACACAAATAGCAAAACATGGCTAACAAGCTCTTCCTCGTCT95000.12522817892391294No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG92200.12153724312405025No Hit
ATCGAAAACAACTAAGTATAAACAATAGTCATGGCTAAGTCTGCTACCAT85280.112415358932961No Hit
CGAAAACAACTAAGTATAAACAATAGTCATGGCTAAGTCTGCTACCATCG81860.10790714449170015No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)