Sample	Total read pairs processed	Read 1 with adapter	Read 2 with adapter	Pairs that were too short	Pairs with too many N	Pairs written (passing filters)
mock.1	24,202,836	706,951 (2.9%)	862,768 (3.6%)	0 (0.0%)	0 (0.0%)	24,202,836 (100.0%)
mock.2	24,162,043	708,578 (2.9%)	868,780 (3.6%)	2 (0.0%)	0 (0.0%)	24,162,041 (100.0%)
mock.3	24,254,539	714,741 (2.9%)	868,060 (3.6%)	1 (0.0%)	0 (0.0%)	24,254,538 (100.0%)
T3.6h.1	24,128,689	712,851 (3.0%)	867,777 (3.6%)	0 (0.0%)	0 (0.0%)	24,128,689 (100.0%)
T3.6h.2	24,156,861	710,625 (2.9%)	879,690 (3.6%)	0 (0.0%)	0 (0.0%)	24,156,861 (100.0%)
T3.6h.3	24,034,170	708,016 (2.9%)	863,898 (3.6%)	0 (0.0%)	0 (0.0%)	24,034,170 (100.0%)
T3.24h.1	24,216,201	712,344 (2.9%)	843,400 (3.5%)	0 (0.0%)	0 (0.0%)	24,216,201 (100.0%)
T3.24h.2	24,090,653	701,045 (2.9%)	838,768 (3.5%)	0 (0.0%)	0 (0.0%)	24,090,653 (100.0%)
T3.24h.3	24,204,371	710,919 (2.9%)	825,321 (3.4%)	0 (0.0%)	0 (0.0%)	24,204,371 (100.0%)