FastQCFastQC Report
Mon 15 Dec 2025
AFR_01.R2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameAFR_01.R2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23788497
Total Bases3.5 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG300870.12647709521118547No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)