Sample	Total read pairs processed	Read 1 with adapter	Read 2 with adapter	Pairs that were too short	Pairs with too many N	Pairs written (passing filters)
CRROE.NH4.1	24,089,373	763,418 (3.2%)	822,655 (3.4%)	0 (0.0%)	0 (0.0%)	24,089,373 (100.0%)
CRROE.NH4.2	24,128,357	761,425 (3.2%)	825,261 (3.4%)	0 (0.0%)	0 (0.0%)	24,128,357 (100.0%)
CRROE.NH4.3	24,196,371	755,986 (3.1%)	837,524 (3.5%)	1 (0.0%)	0 (0.0%)	24,196,370 (100.0%)
CRROE.NO3.1	24,045,197	736,295 (3.1%)	843,127 (3.5%)	0 (0.0%)	0 (0.0%)	24,045,197 (100.0%)
CRROE.NO3.2	24,107,871	731,864 (3.0%)	851,653 (3.5%)	0 (0.0%)	0 (0.0%)	24,107,871 (100.0%)
CRROE.NO3.3	24,094,702	749,442 (3.1%)	840,433 (3.5%)	0 (0.0%)	0 (0.0%)	24,094,702 (100.0%)
Col0.NH4.1	24,150,406	734,187 (3.0%)	859,601 (3.6%)	0 (0.0%)	0 (0.0%)	24,150,406 (100.0%)
Col0.NH4.2	24,071,825	737,106 (3.1%)	851,931 (3.5%)	0 (0.0%)	0 (0.0%)	24,071,825 (100.0%)
Col0.NH4.3	24,148,423	767,439 (3.2%)	844,663 (3.5%)	0 (0.0%)	0 (0.0%)	24,148,423 (100.0%)
Col0.NO3.1	24,126,735	745,083 (3.1%)	855,000 (3.5%)	0 (0.0%)	0 (0.0%)	24,126,735 (100.0%)
Col0.NO3.2	24,056,894	754,941 (3.1%)	845,156 (3.5%)	1 (0.0%)	0 (0.0%)	24,056,893 (100.0%)
Col0.NO3.3	24,154,365	749,857 (3.1%)	851,533 (3.5%)	0 (0.0%)	0 (0.0%)	24,154,365 (100.0%)
crr1hyp1.NH4.1	24,168,115	746,045 (3.1%)	859,561 (3.6%)	0 (0.0%)	0 (0.0%)	24,168,115 (100.0%)
crr1hyp1.NH4.2	24,185,729	770,853 (3.2%)	841,285 (3.5%)	0 (0.0%)	0 (0.0%)	24,185,729 (100.0%)
crr1hyp1.NH4.3	24,125,025	747,941 (3.1%)	852,616 (3.5%)	0 (0.0%)	0 (0.0%)	24,125,025 (100.0%)
crr1hyp1.NO3.1	24,100,291	746,264 (3.1%)	856,423 (3.6%)	0 (0.0%)	0 (0.0%)	24,100,291 (100.0%)
crr1hyp1.NO3.2	24,131,110	737,568 (3.1%)	863,456 (3.6%)	0 (0.0%)	0 (0.0%)	24,131,110 (100.0%)
crr1hyp1.NO3.3	24,030,455	736,544 (3.1%)	859,123 (3.6%)	0 (0.0%)	0 (0.0%)	24,030,455 (100.0%)
