FastQCFastQC Report
Tue 27 Jan 2026
KO.Z.3.R2.clean.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameKO.Z.3.R2.clean.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24026504
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length61-100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAACAATGGCTTCCTCTATGCTCTCTTCCGCTACTATGGTTGCCTCTCC320730.13349008245227853No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)