Sample	Total read pairs processed	Read 1 with adapter	Read 2 with adapter	Pairs that were too short	Pairs with too many N	Pairs written (passing filters)
HA.1	22,480,882	425,442 (1.9%)	457,043 (2.0%)	0 (0.0%)	0 (0.0%)	22,480,882 (100.0%)
HA.2	22,525,129	420,667 (1.9%)	464,315 (2.1%)	0 (0.0%)	0 (0.0%)	22,525,129 (100.0%)
HA.3	22,454,400	426,723 (1.9%)	447,754 (2.0%)	0 (0.0%)	0 (0.0%)	22,454,400 (100.0%)
HE.1	22,455,316	444,935 (2.0%)	467,453 (2.1%)	0 (0.0%)	0 (0.0%)	22,455,316 (100.0%)
HE.2	22,434,234	443,879 (2.0%)	461,311 (2.1%)	0 (0.0%)	0 (0.0%)	22,434,234 (100.0%)
HE.3	22,435,600	421,216 (1.9%)	443,913 (2.0%)	0 (0.0%)	0 (0.0%)	22,435,600 (100.0%)
HP.1	22,447,013	435,445 (1.9%)	437,448 (1.9%)	0 (0.0%)	0 (0.0%)	22,447,013 (100.0%)
HP.2	22,407,624	429,363 (1.9%)	434,741 (1.9%)	0 (0.0%)	0 (0.0%)	22,407,624 (100.0%)
HP.3	22,506,919	425,793 (1.9%)	430,385 (1.9%)	0 (0.0%)	0 (0.0%)	22,506,919 (100.0%)
WA.1	22,496,530	409,076 (1.8%)	461,621 (2.1%)	0 (0.0%)	0 (0.0%)	22,496,530 (100.0%)
WA.2	22,504,318	427,373 (1.9%)	475,171 (2.1%)	0 (0.0%)	0 (0.0%)	22,504,318 (100.0%)
WA.3	22,486,073	408,304 (1.8%)	448,937 (2.0%)	0 (0.0%)	0 (0.0%)	22,486,073 (100.0%)
WE.1	22,536,211	420,164 (1.9%)	459,619 (2.0%)	2 (0.0%)	0 (0.0%)	22,536,209 (100.0%)
WE.2	22,356,737	430,770 (1.9%)	457,240 (2.0%)	0 (0.0%)	0 (0.0%)	22,356,737 (100.0%)
WE.3	22,522,390	432,329 (1.9%)	467,747 (2.1%)	0 (0.0%)	0 (0.0%)	22,522,390 (100.0%)
WP.1	22,476,866	432,399 (1.9%)	431,293 (1.9%)	0 (0.0%)	0 (0.0%)	22,476,866 (100.0%)
WP.2	22,500,744	442,370 (2.0%)	432,093 (1.9%)	0 (0.0%)	0 (0.0%)	22,500,744 (100.0%)
WP.3	22,442,826	421,874 (1.9%)	422,942 (1.9%)	0 (0.0%)	0 (0.0%)	22,442,826 (100.0%)